BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043230
(318 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 154/337 (45%), Gaps = 72/337 (21%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSI---- 96
LG+G FG LC + TG + A K ISKR++ + +K+ + EV++++ L P+I
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLY 92
Query: 97 --------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDL 136
LFD I++R +SE AA ++R ++ + H ++HRDL
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 152
Query: 137 KPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQRVDA-- 194
KPEN L S ++A ++ DFGLS FE K ++ +G+ YYIAPEVL D++ D
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 212
Query: 195 -------------------------AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
+ KG+ F+ + S SA +L+ +MLT P
Sbjct: 213 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 272
Query: 230 RIIAAQVV-HPWLKESGE---ASDKPIDTAVIFRMKQNTAMNKLKKLALKWHSYDELREG 285
RI A + H W++ + + D P I ++Q KL + AL +
Sbjct: 273 RISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLY--------- 323
Query: 286 SAKLGSTLTGFNAKQYMQA----ADIDGNGTIDYIEL 318
+GS LT + + + A D +G+G +D EL
Sbjct: 324 ---MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAEL 357
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 154/337 (45%), Gaps = 72/337 (21%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSI---- 96
LG+G FG LC + TG + A K ISKR++ + +K+ + EV++++ L P+I
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLY 115
Query: 97 --------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDL 136
LFD I++R +SE AA ++R ++ + H ++HRDL
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 175
Query: 137 KPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQRVDA-- 194
KPEN L S ++A ++ DFGLS FE K ++ +G+ YYIAPEVL D++ D
Sbjct: 176 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 235
Query: 195 -------------------------AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
+ KG+ F+ + S SA +L+ +MLT P
Sbjct: 236 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 295
Query: 230 RIIAAQVV-HPWLKESGE---ASDKPIDTAVIFRMKQNTAMNKLKKLALKWHSYDELREG 285
RI A + H W++ + + D P I ++Q KL + AL +
Sbjct: 296 RISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLY--------- 346
Query: 286 SAKLGSTLTGFNAKQYMQA----ADIDGNGTIDYIEL 318
+GS LT + + + A D +G+G +D EL
Sbjct: 347 ---MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAEL 380
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 154/337 (45%), Gaps = 72/337 (21%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSI---- 96
LG+G FG LC + TG + A K ISKR++ + +K+ + EV++++ L P+I
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLY 116
Query: 97 --------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDL 136
LFD I++R +SE AA ++R ++ + H ++HRDL
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 176
Query: 137 KPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQRVDA-- 194
KPEN L S ++A ++ DFGLS FE K ++ +G+ YYIAPEVL D++ D
Sbjct: 177 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 236
Query: 195 -------------------------AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
+ KG+ F+ + S SA +L+ +MLT P
Sbjct: 237 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 296
Query: 230 RIIAAQVV-HPWLKESGE---ASDKPIDTAVIFRMKQNTAMNKLKKLALKWHSYDELREG 285
RI A + H W++ + + D P I ++Q KL + AL +
Sbjct: 297 RISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLY--------- 347
Query: 286 SAKLGSTLTGFNAKQYMQA----ADIDGNGTIDYIEL 318
+GS LT + + + A D +G+G +D EL
Sbjct: 348 ---MGSKLTSQDETKELTAIFHKMDKNGDGQLDRAEL 381
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 158/375 (42%), Gaps = 96/375 (25%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSI-- 96
K+LG G +G LC + TG + A K I K + + EV V++ L P+I
Sbjct: 10 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HPNIMK 68
Query: 97 ----------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHR 134
LFD I+ R +SE AA +++ ++ H ++HR
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHR 128
Query: 135 DLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQRVDA 194
DLKPEN L S +AL+K DFGLS FE G +E +G+ YYIAPEVL +K D++ D
Sbjct: 129 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDV 188
Query: 195 ---------------------------AILKGEINFQRDPFPSASSSAIELVHRMLTQDP 227
+ KG+ +F + S A +LV MLT +P
Sbjct: 189 WSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEP 248
Query: 228 KRRIIAAQVV-HPWL----------------------KESGEASDKPIDTAVIFRMKQNT 264
+RI A + + HPW+ + ++S K A++F + T
Sbjct: 249 SKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAMLFMGSKLT 308
Query: 265 AMNKLKKLALKWHSYD----------ELREGSAKL----GSTLTGFNAKQ-------YMQ 303
+ + K+L + D EL EG KL G T++ ++ Q +Q
Sbjct: 309 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQ 368
Query: 304 AADIDGNGTIDYIEL 318
+ D D NG I+Y E
Sbjct: 369 SVDFDRNGYIEYSEF 383
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 163/376 (43%), Gaps = 94/376 (25%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
Y K+LG G +G LC + T ++ A K I K V + EV V++ L P
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTS-VSTSSNSKLLEEVAVLKLLD-HP 96
Query: 95 SI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+I LFD I+ R ++E AA +++ ++ V H
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN 156
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQ 190
++HRDLKPEN L S +++AL+K DFGLS FE K +E +G+ YYIAPEVL +K D+
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDE 216
Query: 191 RVDA---------------------------AILKGEINFQRDPFPSASSSAIELVHRML 223
+ D + KG+ F + + S A +L+ +ML
Sbjct: 217 KCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQML 276
Query: 224 TQDPKRRIIAAQVV-HPWL------KESG----------------EASDKPIDTAVIFRM 260
D +RRI A Q + HPW+ KESG + S K A+++
Sbjct: 277 QFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMA 336
Query: 261 KQNTAMNKLKKLALKWHSYD----------ELREGSAKL-GSTLTGFNAKQ-------YM 302
+ T+ + K+L + D EL +G +KL G + F+ Q +
Sbjct: 337 SKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAIL 396
Query: 303 QAADIDGNGTIDYIEL 318
AAD D NG IDY E
Sbjct: 397 GAADFDRNGYIDYSEF 412
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 74/338 (21%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSI---- 96
LG+G FG LC + TG + A K ISKR++ + +K+ + EV++++ L P+I
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIXKLY 92
Query: 97 --------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDL 136
LFD I++R +SE AA ++R ++ + H ++HRDL
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDL 152
Query: 137 KPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQRVDA-- 194
KPEN L S ++A ++ DFGLS FE K ++ +G+ YYIAPEVL D++ D
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWS 212
Query: 195 -------------------------AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
+ KG+ F+ + S SA +L+ + LT P
Sbjct: 213 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSX 272
Query: 230 RIIAAQVV-HPWLKESGE---ASDKPIDTAVIFRMKQNTAMNKLKKLAL-----KWHSYD 280
RI A + H W++ + + D P I ++Q KL + AL K S D
Sbjct: 273 RISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYXGSKLTSQD 332
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
E +E +A D +G+G +D EL
Sbjct: 333 ETKELTA-------------IFHKXDKNGDGQLDRAEL 357
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 145/324 (44%), Gaps = 61/324 (18%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEV-- 86
ED++ + + LG G F L E +TG FA K I K+ L ++ + E+ V
Sbjct: 18 EDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKG--KESSIENEIAVLR 75
Query: 87 -----------------------MQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV 123
MQ +SG LFDRIV +G Y+E+ A+ ++R ++ V
Sbjct: 76 KIKHENIVALEDIYESPNHLYLVMQLVSGGE--LFDRIVEKGFYTEKDASTLIRQVLDAV 133
Query: 124 NVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEV 183
H G++HRDLKPEN L+ S DE + + +DFGLS +G V G+P Y+APEV
Sbjct: 134 YYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEV 193
Query: 184 LLQK----------------------------MDQRVDAAILKGEINFQRDPFPSASSSA 215
L QK D ++ ILK E F + S SA
Sbjct: 194 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSA 253
Query: 216 IELVHRMLTQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLAL 274
+ + ++ +DP +R Q HPW+ A +K I +V ++++N A +K ++
Sbjct: 254 KDFIRNLMEKDPNKRYTCEQAARHPWIA-GDTALNKNIHESVSAQIRKNFAKSKWRQAFN 312
Query: 275 KWHSYDELREGSAKLGSTLTGFNA 298
+R+ LGS+L NA
Sbjct: 313 ATAVVRHMRK--LHLGSSLDSSNA 334
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 122/254 (48%), Gaps = 53/254 (20%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSI---- 96
LG+G FG LC + TG + A K ISKR++ + +K+ + EV++++ L P+I
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLY 98
Query: 97 --------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDL 136
LFD I++R +SE AA ++R ++ + H ++HRDL
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDL 158
Query: 137 KPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQRVDA-- 194
KPEN L S ++A ++ DFGLS FE K ++ +G+ YYIAPEVL D++ D
Sbjct: 159 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWS 218
Query: 195 -------------------------AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
+ KG+ F+ + S SA +L+ +MLT P
Sbjct: 219 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 278
Query: 230 RIIAAQVV-HPWLK 242
RI A + H W++
Sbjct: 279 RISARDALDHEWIQ 292
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 116/255 (45%), Gaps = 53/255 (20%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSI-- 96
K+LG G +G LC + TG + A K I K + + EV V++ L P+I
Sbjct: 27 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HPNIMK 85
Query: 97 ----------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHR 134
LFD I+ R +SE AA +++ ++ H ++HR
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHR 145
Query: 135 DLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQRVDA 194
DLKPEN L S +AL+K DFGLS FE G +E +G+ YYIAPEVL +K D++ D
Sbjct: 146 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDV 205
Query: 195 ---------------------------AILKGEINFQRDPFPSASSSAIELVHRMLTQDP 227
+ KG+ +F + S A +LV MLT +P
Sbjct: 206 WSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEP 265
Query: 228 KRRIIAAQVV-HPWL 241
+RI A + + HPW+
Sbjct: 266 SKRISAEEALNHPWI 280
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 129/278 (46%), Gaps = 56/278 (20%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEV 84
G T D+ +YT+ +GRG +G + + T ++ A K I K V+D D + E+
Sbjct: 18 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY-FVEDV--DRFKQEI 74
Query: 85 EVMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIM 120
E+M+ L P+I LF+R+V + + E AA +++ ++
Sbjct: 75 EIMKSLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVL 133
Query: 121 GVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIA 180
V CH V HRDLKPENFLF + ++ LK DFGL+ F+ GK+ R VG+PYY++
Sbjct: 134 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 193
Query: 181 PEVL---------------------------LQKMDQRVDAAILKGEINFQRDPFPSASS 213
P+VL D V I +G F + + S
Sbjct: 194 PQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSP 253
Query: 214 SAIELVHRMLTQDPKRRIIAAQVV-HPWLKESGEASDK 250
A L+ R+LT+ PK+RI + Q + H W ++ +S +
Sbjct: 254 QAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPR 291
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 129/278 (46%), Gaps = 56/278 (20%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEV 84
G T D+ +YT+ +GRG +G + + T ++ A K I K V+D D + E+
Sbjct: 1 GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY-FVEDV--DRFKQEI 57
Query: 85 EVMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIM 120
E+M+ L P+I LF+R+V + + E AA +++ ++
Sbjct: 58 EIMKSLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVL 116
Query: 121 GVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIA 180
V CH V HRDLKPENFLF + ++ LK DFGL+ F+ GK+ R VG+PYY++
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 176
Query: 181 PEVL---------------------------LQKMDQRVDAAILKGEINFQRDPFPSASS 213
P+VL D V I +G F + + S
Sbjct: 177 PQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSP 236
Query: 214 SAIELVHRMLTQDPKRRIIAAQVV-HPWLKESGEASDK 250
A L+ R+LT+ PK+RI + Q + H W ++ +S +
Sbjct: 237 QAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPR 274
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 134/296 (45%), Gaps = 57/296 (19%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ 88
ED+ Y LG G F L + T A K I+K+ L + ++ + E+ V+
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--EGKEGSMENEIAVLH 71
Query: 89 YLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVN 124
+ P+I LFDRIV +G Y+ER A+ ++ ++ V
Sbjct: 72 KIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK 130
Query: 125 VCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
H G++HRDLKPEN L+ S DE++ + +DFGLS + G V G+P Y+APEVL
Sbjct: 131 YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 185 LQK----------------------------MDQRVDAAILKGEINFQRDPFPSASSSAI 216
QK D ++ ILK E F + S SA
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 217 ELVHRMLTQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKK 271
+ + ++ +DP++R Q + HPW+ A DK I +V ++K+N A +K K+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 151/340 (44%), Gaps = 66/340 (19%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
Y I LG+G FG C + T ++A K I+K K+ + + EVE+++ L P
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLD-HP 81
Query: 95 SI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+I LFD I+ R +SE AA +++ + + H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQ 190
++HRDLKPEN L S +++ +K DFGLS F++ ++ +G+ YYIAPEVL D+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 191 RVDA-----------------------AILK----GEINFQRDPFPSASSSAIELVHRML 223
+ D ILK G+ F + + S A +L+ +ML
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 224 TQDPKRRIIAAQVV-HPWLK----ESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS 278
T P RI A Q + HPW++ E+ SD P + + ++Q A KL + AL +
Sbjct: 262 TFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYM- 320
Query: 279 YDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
++KL + + + D + +G +D EL
Sbjct: 321 -------ASKLTTLDETKQLTEIFRKLDTNNDGMLDRDEL 353
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 110/215 (51%), Gaps = 32/215 (14%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
+MQ +SG LFDRIV +G Y+ER A+ ++ ++ V H G++HRDLKPEN L+ S
Sbjct: 94 IMQLVSGGE--LFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 146 WDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK------------------ 187
DE++ + +DFGLS + G V G+P Y+APEVL QK
Sbjct: 152 LDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 211
Query: 188 ----------MDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVV 237
D ++ ILK E F + S SA + + ++ +DP++R Q +
Sbjct: 212 LCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL 271
Query: 238 -HPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKK 271
HPW+ A DK I +V ++K+N A +K K+
Sbjct: 272 QHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 110/215 (51%), Gaps = 32/215 (14%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
+MQ +SG LFDRIV +G Y+ER A+ ++ ++ V H G++HRDLKPEN L+ S
Sbjct: 94 IMQLVSGGE--LFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS 151
Query: 146 WDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK------------------ 187
DE++ + +DFGLS + G V G+P Y+APEVL QK
Sbjct: 152 LDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 211
Query: 188 ----------MDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVV 237
D ++ ILK E F + S SA + + ++ +DP++R Q +
Sbjct: 212 LCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL 271
Query: 238 -HPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKK 271
HPW+ A DK I +V ++K+N A +K K+
Sbjct: 272 QHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 136/291 (46%), Gaps = 64/291 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ + ELGRG I Y C + T +A K L K +K VR E+ V+ LS P
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKV-----LKKTVDKKIVRTEIGVLLRLS-HP 108
Query: 95 SI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+I LFDRIV +G+YSER AA ++ I+ V H G
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENG 168
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLL----- 185
++HRDLKPEN L+ + +A LK DFGLS E + + + G+P Y APE+L
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYG 228
Query: 186 ------------------------QKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHR 221
++ DQ + IL E F + S +A +LV +
Sbjct: 229 PEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRK 288
Query: 222 MLTQDPKRRIIAAQVV-HPWLKESGEASD-KPIDTAVIFRMKQNTAMNKLK 270
++ DPK+R+ Q + HPW+ +G+A++ +DTA ++++ A KLK
Sbjct: 289 LIVLDPKKRLTTFQALQHPWV--TGKAANFVHMDTAQK-KLQEFNARRKLK 336
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 57/262 (21%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKL-VKDYEKDDVRGEVEVMQYLSG 92
+Y + +ELG+G F + C +TGL+FA K I+ +KL +D++K + E + + L
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQ- 86
Query: 93 QPSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHC 128
P+I LF+ IVAR YSE A+ ++ I+ + CH
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL---- 184
G++HR+LKPEN L S + A +K DFGL++ + + + G+P Y++PEVL
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 185 -----------------------LQKMDQ-RVDAAILKGEINFQRDPFPSASSSAIELVH 220
DQ R+ A I G ++ + + + A L+
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 266
Query: 221 RMLTQDPKRRIIAAQVVH-PWL 241
MLT +PK+RI A Q + PW+
Sbjct: 267 SMLTVNPKKRITADQALKVPWI 288
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 57/262 (21%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKL-VKDYEKDDVRGEVEVMQYLSG 92
+Y + +ELG+G F + C +TGL+FA K I+ +KL +D++K + E + + L
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQ- 63
Query: 93 QPSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHC 128
P+I LF+ IVAR YSE A+ ++ I+ + CH
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL---- 184
G++HR+LKPEN L S + A +K DFGL++ + + + G+P Y++PEVL
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 185 -----------------------LQKMDQ-RVDAAILKGEINFQRDPFPSASSSAIELVH 220
DQ R+ A I G ++ + + + A L+
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243
Query: 221 RMLTQDPKRRIIAAQVVH-PWL 241
MLT +PK+RI A Q + PW+
Sbjct: 244 SMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 57/262 (21%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKL-VKDYEKDDVRGEVEVMQYLSG 92
+Y + +ELG+G F + C +TGL+FA K I+ +KL +D++K + E + + L
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQ- 62
Query: 93 QPSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHC 128
P+I LF+ IVAR YSE A+ ++ I+ + CH
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL---- 184
G++HR+LKPEN L S + A +K DFGL++ + + + G+P Y++PEVL
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 185 -----------------------LQKMDQ-RVDAAILKGEINFQRDPFPSASSSAIELVH 220
DQ R+ A I G ++ + + + A L+
Sbjct: 183 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 242
Query: 221 RMLTQDPKRRIIAAQVVH-PWL 241
MLT +PK+RI A Q + PW+
Sbjct: 243 SMLTVNPKKRITADQALKVPWI 264
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 57/262 (21%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKL-VKDYEKDDVRGEVEVMQYLSG 92
+Y + +ELG+G F + C +TGL+FA K I+ +KL +D++K + E + + L
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQ- 63
Query: 93 QPSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHC 128
P+I LF+ IVAR YSE A+ ++ I+ + CH
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL---- 184
G++HR+LKPEN L S + A +K DFGL++ + + + G+P Y++PEVL
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 185 -----------------------LQKMDQ-RVDAAILKGEINFQRDPFPSASSSAIELVH 220
DQ R+ A I G ++ + + + A L+
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243
Query: 221 RMLTQDPKRRIIAAQVVH-PWL 241
MLT +PK+RI A Q + PW+
Sbjct: 244 SMLTVNPKKRITADQALKVPWI 265
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 137/291 (47%), Gaps = 58/291 (19%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKL-VKDYEKDDVRGEVEVMQYLSGQ 93
Y + +ELG+G F + C + TG ++A K I+ +KL +D++K + E + + L
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK--LEREARICRLLK-H 62
Query: 94 PSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
P+I LF+ IVAR +YSE A+ ++ I+ VN CH
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVL---- 184
G++HRDLKPEN L S + A +K DFGL++ + + + + G+P Y++PEVL
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 185 -----------------------LQKMDQ-RVDAAILKGEINFQRDPFPSASSSAIELVH 220
DQ R+ I G +F + + + A +L++
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 221 RMLTQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQNTAMNKLK 270
+MLT +P +RI A++ + HPW+ + + + +K+ A KLK
Sbjct: 243 KMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLK 293
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 137/291 (47%), Gaps = 58/291 (19%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKL-VKDYEKDDVRGEVEVMQYLSGQ 93
Y + +ELG+G F + C + TG ++A K I+ +KL +D++K + E + + L
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK--LEREARICRLLK-H 62
Query: 94 PSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
P+I LF+ IVAR +YSE A+ ++ I+ VN CH
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVL---- 184
G++HRDLKPEN L S + A +K DFGL++ + + + + G+P Y++PEVL
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 185 -----------------------LQKMDQ-RVDAAILKGEINFQRDPFPSASSSAIELVH 220
DQ R+ I G +F + + + A +L++
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 221 RMLTQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQNTAMNKLK 270
+MLT +P +RI A++ + HPW+ + + + +K+ A KLK
Sbjct: 243 KMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLK 293
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 54/261 (20%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
Y I LG+G FG C + T ++A K I+K K+ + + EVE+++ L P
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLD-HP 81
Query: 95 SI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+I LFD I+ R +SE AA +++ + + H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQ 190
++HRDLKPEN L S +++ +K DFGLS F++ ++ +G+ YYIAPEVL D+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 191 RVDA-----------------------AILK----GEINFQRDPFPSASSSAIELVHRML 223
+ D ILK G+ F + + S A +L+ +ML
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 224 TQDPKRRIIAAQVV-HPWLKE 243
T P RI A Q + HPW+++
Sbjct: 262 TFHPSLRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 54/261 (20%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
Y I LG+G FG C + T ++A K I+K K+ + + EVE+++ L P
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLD-HP 81
Query: 95 SI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+I LFD I+ R +SE AA +++ + + H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQ 190
++HRDLKPEN L S +++ +K DFGLS F++ ++ +G+ YYIAPEVL D+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE 201
Query: 191 RVDA-----------------------AILK----GEINFQRDPFPSASSSAIELVHRML 223
+ D ILK G+ F + + S A +L+ +ML
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKML 261
Query: 224 TQDPKRRIIAAQVV-HPWLKE 243
T P RI A Q + HPW+++
Sbjct: 262 TFHPSLRITATQCLEHPWIQK 282
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 123/282 (43%), Gaps = 59/282 (20%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEV-- 86
ED+ Y LG G F L + T A K I+K L + ++ + E+ V
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLH 71
Query: 87 -----------------------MQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV 123
MQ +SG LFDRIV +G Y+ER A+ ++ ++ V
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGE--LFDRIVEKGFYTERDASRLIFQVLDAV 129
Query: 124 NVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEV 183
H G++HRDLKPEN L+ S DE++ + +DFGLS + G V G+P Y+APEV
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEV 189
Query: 184 LLQK----------------------------MDQRVDAAILKGEINFQRDPFPSASSSA 215
L QK D ++ ILK E F + S SA
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 249
Query: 216 IELVHRMLTQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAV 256
+ + ++ +DP++R Q + HPW+ A DK I +V
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSV 290
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 122/271 (45%), Gaps = 58/271 (21%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVE 85
EDVE HY +G+ELG G+F I C + TG ++A K I KR+L + ++++ EV
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P+I LFD + + +E A L+ I+
Sbjct: 68 ILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 126
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWD-ENALLKATDFGLSVFFEEGKVYREIVGSPYYIA 180
V+ H + + H DLKPEN + + N +K DFG++ E G ++ I G+P ++A
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 186
Query: 181 PEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPSAS 212
PE++ L + Q I +F + F + S
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 246
Query: 213 SSAIELVHRMLTQDPKRRIIAAQVV-HPWLK 242
A + + R+L +DPKRR+ AQ + H W+K
Sbjct: 247 ELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 131/282 (46%), Gaps = 55/282 (19%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD---VRGEVE------------ 85
LG G F +L + TG FA K I K +D ++ V +++
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 86 -------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKP 138
VMQ +SG LFDRI+ RG Y+E+ A+ V++ ++ V H G++HRDLKP
Sbjct: 77 STTHYYLVMQLVSGGE--LFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKP 134
Query: 139 ENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK----------- 187
EN L+ + +EN+ + TDFGLS E+ + G+P Y+APEVL QK
Sbjct: 135 ENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSI 193
Query: 188 -----------------MDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRR 230
+ ++ I +G F+ + S SA + + +L +DP R
Sbjct: 194 GVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNER 253
Query: 231 IIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKK 271
+ + HPW+ + A + I +V ++++N A +K ++
Sbjct: 254 YTCEKALSHPWI-DGNTALHRDIYPSVSLQIQKNFAKSKWRQ 294
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 134/291 (46%), Gaps = 58/291 (19%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKL-VKDYEKDDVRGEVEVMQYLSGQ 93
Y + +ELG+G F + C + G ++A K I+ +KL +D++K + E + + L
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQK--LEREARICRLLK-H 80
Query: 94 PSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
P+I LF+ IVAR +YSE A+ ++ I+ V CH
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 140
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVL---- 184
GV+HRDLKPEN L S + A +K DFGL++ E E + + G+P Y++PEVL
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 185 -----------------------LQKMDQ-RVDAAILKGEINFQRDPFPSASSSAIELVH 220
DQ R+ I G +F + + + A +L++
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 260
Query: 221 RMLTQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQNTAMNKLK 270
+MLT +P +RI AA+ + HPW+ + + +K+ A KLK
Sbjct: 261 KMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 311
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 131/305 (42%), Gaps = 71/305 (23%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVE 85
E+V+ +Y G+ELG G+F + C E STGLQ+A K I KR+ + ++D+ EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P++ LFD + + +E A L+ I+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENA---LLKATDFGLSVFFEEGKVYREIVGSPYY 178
V H + H DLKPEN + D N +K DFGL+ + G ++ I G+P +
Sbjct: 126 GVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 179 IAPEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPS 210
+APE++ L Q A + F+ + F +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLKESGEASDKPIDT-AVIFRMKQNTAMNK 268
S+ A + + R+L +DPK+R+ I + HPW+ KP DT + R M K
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI--------KPKDTQQALSRKASAVNMEK 295
Query: 269 LKKLA 273
KK A
Sbjct: 296 FKKFA 300
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 58/269 (21%)
Query: 31 VELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVEVM 87
VE HY +G+ELG G+F I C + TG ++A K I KR+L + ++++ EV ++
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 88 QYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVV 123
+ + P+I LFD + + +E A L+ I+ V
Sbjct: 63 REIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 124 NVCHCRGVMHRDLKPENFLFTSWD-ENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPE 182
+ H + + H DLKPEN + + N +K DFG++ E G ++ I G+P ++APE
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181
Query: 183 VL----------------------------LQKMDQRVDAAILKGEINFQRDPFPSASSS 214
++ L + Q I +F + F + S
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241
Query: 215 AIELVHRMLTQDPKRRIIAAQVV-HPWLK 242
A + + R+L +DPKRR+ AQ + H W+K
Sbjct: 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 58/269 (21%)
Query: 31 VELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVEVM 87
VE HY +G+ELG G+F I C + TG ++A K I KR+L + ++++ EV ++
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 88 QYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVV 123
+ + P+I LFD + + +E A L+ I+ V
Sbjct: 84 REIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 142
Query: 124 NVCHCRGVMHRDLKPENFLFTSWD-ENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPE 182
+ H + + H DLKPEN + + N +K DFG++ E G ++ I G+P ++APE
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 202
Query: 183 VL----------------------------LQKMDQRVDAAILKGEINFQRDPFPSASSS 214
++ L + Q I +F + F + S
Sbjct: 203 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 262
Query: 215 AIELVHRMLTQDPKRRIIAAQVV-HPWLK 242
A + + R+L +DPKRR+ AQ + H W+K
Sbjct: 263 AKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 115/271 (42%), Gaps = 62/271 (22%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKD-----DVRGEVEVMQ 88
Y + K LG G G L E T + A K ISKRK ++ +V E+E+++
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 89 YLSGQPSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGVVNV 125
L+ P I LFD++V E ++ V
Sbjct: 71 KLN-HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLL 185
H G++HRDLKPEN L +S +E+ L+K TDFG S E + R + G+P Y+APEVL+
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 186 Q----KMDQRVDA----------------------------AILKGEINFQRDPFPSASS 213
++ VD I G+ NF + + S
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 214 SAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
A++LV ++L DPK R + + HPWL++
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 115/271 (42%), Gaps = 62/271 (22%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKD-----DVRGEVEVMQ 88
Y + K LG G G L E T + A K ISKRK ++ +V E+E+++
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 89 YLSGQPSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGVVNV 125
L+ P I LFD++V E ++ V
Sbjct: 71 KLN-HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLL 185
H G++HRDLKPEN L +S +E+ L+K TDFG S E + R + G+P Y+APEVL+
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 186 Q----KMDQRVDA----------------------------AILKGEINFQRDPFPSASS 213
++ VD I G+ NF + + S
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 214 SAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
A++LV ++L DPK R + + HPWL++
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 115/271 (42%), Gaps = 62/271 (22%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKD-----DVRGEVEVMQ 88
Y + K LG G G L E T + A K ISKRK ++ +V E+E+++
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 89 YLSGQPSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGVVNV 125
L+ P I LFD++V E ++ V
Sbjct: 71 KLN-HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLL 185
H G++HRDLKPEN L +S +E+ L+K TDFG S E + R + G+P Y+APEVL+
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 189
Query: 186 Q----KMDQRVDA----------------------------AILKGEINFQRDPFPSASS 213
++ VD I G+ NF + + S
Sbjct: 190 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 214 SAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
A++LV ++L DPK R + + HPWL++
Sbjct: 250 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 115/271 (42%), Gaps = 62/271 (22%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKD-----DVRGEVEVMQ 88
Y + K LG G G L E T + A K ISKRK ++ +V E+E+++
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 69
Query: 89 YLSGQPSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGVVNV 125
L+ P I LFD++V E ++ V
Sbjct: 70 KLN-HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLL 185
H G++HRDLKPEN L +S +E+ L+K TDFG S E + R + G+P Y+APEVL+
Sbjct: 129 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLV 188
Query: 186 Q----KMDQRVDA----------------------------AILKGEINFQRDPFPSASS 213
++ VD I G+ NF + + S
Sbjct: 189 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 248
Query: 214 SAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
A++LV ++L DPK R + + HPWL++
Sbjct: 249 KALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 115/270 (42%), Gaps = 62/270 (22%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKD-----DVRGEVEVMQY 89
Y + K LG G G L E T + A K ISKRK ++ +V E+E+++
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 90 LSGQPSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVC 126
L+ P I LFD++V E ++ V
Sbjct: 78 LN-HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 136
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G++HRDLKPEN L +S +E+ L+K TDFG S E + R + G+P Y+APEVL+
Sbjct: 137 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 196
Query: 187 ----KMDQRVDA----------------------------AILKGEINFQRDPFPSASSS 214
++ VD I G+ NF + + S
Sbjct: 197 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 256
Query: 215 AIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
A++LV ++L DPK R + + HPWL++
Sbjct: 257 ALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 62/273 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVE 85
E+V+ +Y G+ELG G+F + C E STGLQ+A K I KR+ + ++D+ EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P++ LFD + + +E A L+ I+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENA---LLKATDFGLSVFFEEGKVYREIVGSPYY 178
V H + H DLKPEN + D N +K DFGL+ + G ++ I G+P +
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 179 IAPEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPS 210
+APE++ L Q A + F+ + F +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLK 242
S+ A + + R+L +DPK+R+ I + HPW+K
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 133/291 (45%), Gaps = 58/291 (19%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKL-VKDYEKDDVRGEVEVMQYLSGQ 93
Y + +ELG+G F + C + G ++A I+ +KL +D++K + E + + L
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK--LEREARICRLLK-H 69
Query: 94 PSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
P+I LF+ IVAR +YSE A+ ++ I+ V CH
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 129
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVL---- 184
GV+HR+LKPEN L S + A +K DFGL++ E E + + G+P Y++PEVL
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 189
Query: 185 -----------------------LQKMDQ-RVDAAILKGEINFQRDPFPSASSSAIELVH 220
DQ R+ I G +F + + + A +L++
Sbjct: 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 249
Query: 221 RMLTQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQNTAMNKLK 270
+MLT +P +RI AA+ + HPW+ + + +K+ A KLK
Sbjct: 250 KMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 300
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 62/273 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVE 85
E+V+ +Y G+ELG G+F + C E STGLQ+A K I KR+ + ++D+ EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P++ LFD + + +E A L+ I+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENA---LLKATDFGLSVFFEEGKVYREIVGSPYY 178
V H + H DLKPEN + D N +K DFGL+ + G ++ I G+P +
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAF 183
Query: 179 IAPEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPS 210
+APE++ L Q A + F+ + F +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLK 242
S+ A + + R+L +DPK+R+ I + HPW+K
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 62/273 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVE 85
E+V+ +Y G+ELG G+F + C E STGLQ+A K I KR+ + ++D+ EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P++ LFD + + +E A L+ I+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENA---LLKATDFGLSVFFEEGKVYREIVGSPYY 178
V H + H DLKPEN + D N +K DFGL+ + G ++ I G+P +
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 179 IAPEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPS 210
+APE++ L Q A + F+ + F +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLK 242
S+ A + + R+L +DPK+R+ I + HPW+K
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 62/273 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVE 85
E+V+ +Y G+ELG G+F + C E STGLQ+A K I KR+ + ++D+ EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P++ LFD + + +E A L+ I+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENA---LLKATDFGLSVFFEEGKVYREIVGSPYY 178
V H + H DLKPEN + D N +K DFGL+ + G ++ I G+P +
Sbjct: 126 GVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 179 IAPEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPS 210
+APE++ L Q A + F+ + F +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLK 242
S+ A + + R+L +DPK+R+ I + HPW+K
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 62/273 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVE 85
E+V+ +Y G+ELG G+F + C E STGLQ+A K I KR+ + ++D+ EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P++ LFD + + +E A L+ I+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENA---LLKATDFGLSVFFEEGKVYREIVGSPYY 178
V H + H DLKPEN + D N +K DFGL+ + G ++ I G+P +
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 179 IAPEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPS 210
+APE++ L Q A + F+ + F +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLK 242
S+ A + + R+L +DPK+R+ I + HPW+K
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 62/273 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVE 85
E+V+ +Y G+ELG G+F + C E STGLQ+A K I KR+ + ++D+ EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P++ LFD + + +E A L+ I+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENA---LLKATDFGLSVFFEEGKVYREIVGSPYY 178
V H + H DLKPEN + D N +K DFGL+ + G ++ I G+P +
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 179 IAPEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPS 210
+APE++ L Q A + F+ + F +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLK 242
S+ A + + R+L +DPK+R+ I + HPW+K
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 62/273 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVE 85
E+V+ +Y G+ELG G+F + C E STGLQ+A K I KR+ + ++D+ EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P++ LFD + + +E A L+ I+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENA---LLKATDFGLSVFFEEGKVYREIVGSPYY 178
V H + H DLKPEN + D N +K DFGL+ + G ++ I G+P +
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 179 IAPEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPS 210
+APE++ L Q A + F+ + F +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLK 242
S+ A + + R+L +DPK+R+ I + HPW+K
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 62/273 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVE 85
E+V+ +Y G+ELG G+F + C E STGLQ+A K I KR+ + ++D+ EV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P++ LFD + + +E A L+ I+
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENA---LLKATDFGLSVFFEEGKVYREIVGSPYY 178
V H + H DLKPEN + D N +K DFGL+ + G ++ I G+P +
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 182
Query: 179 IAPEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPS 210
+APE++ L Q A + F+ + F +
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 242
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLK 242
S+ A + + R+L +DPK+R+ I + HPW+K
Sbjct: 243 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 62/273 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVE 85
E+V+ +Y G+ELG G+F + C E STGLQ+A K I KR+ + ++D+ EV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P++ LFD + + +E A L+ I+
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 124
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENA---LLKATDFGLSVFFEEGKVYREIVGSPYY 178
V H + H DLKPEN + D N +K DFGL+ + G ++ I G+P +
Sbjct: 125 GVYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 182
Query: 179 IAPEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPS 210
+APE++ L Q A + F+ + F +
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 242
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLK 242
S+ A + + R+L +DPK+R+ I + HPW+K
Sbjct: 243 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 115/270 (42%), Gaps = 62/270 (22%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKD-----DVRGEVEVMQY 89
Y + K LG G G L E T + A + ISKRK ++ +V E+E+++
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 90 LSGQPSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVC 126
L+ P I LFD++V E ++ V
Sbjct: 211 LN-HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 269
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G++HRDLKPEN L +S +E+ L+K TDFG S E + R + G+P Y+APEVL+
Sbjct: 270 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 329
Query: 187 ----KMDQRVDA----------------------------AILKGEINFQRDPFPSASSS 214
++ VD I G+ NF + + S
Sbjct: 330 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 389
Query: 215 AIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
A++LV ++L DPK R + + HPWL++
Sbjct: 390 ALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 115/270 (42%), Gaps = 62/270 (22%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKD-----DVRGEVEVMQY 89
Y + K LG G G L E T + A + ISKRK ++ +V E+E+++
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 90 LSGQPSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVC 126
L+ P I LFD++V E ++ V
Sbjct: 197 LN-HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 255
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G++HRDLKPEN L +S +E+ L+K TDFG S E + R + G+P Y+APEVL+
Sbjct: 256 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS 315
Query: 187 ----KMDQRVDA----------------------------AILKGEINFQRDPFPSASSS 214
++ VD I G+ NF + + S
Sbjct: 316 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEK 375
Query: 215 AIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
A++LV ++L DPK R + + HPWL++
Sbjct: 376 ALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 62/273 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVE 85
E+V+ +Y G+ELG G+F + C E STGLQ+A K I KR+ + ++D+ EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P++ LFD + + +E A L+ I+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENA---LLKATDFGLSVFFEEGKVYREIVGSPYY 178
V H + H DLKPEN + D N +K DFGL+ + G ++ I G+P +
Sbjct: 126 GVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 179 IAPEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPS 210
+APE++ L Q A + F+ + F +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLK 242
S+ A + + R+L +DPK+R+ I + HPW+K
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 62/273 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVE 85
E+V+ +Y G+ELG G+F + C E STGLQ+A K I KR+ + ++D+ EV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P++ LFD + + +E A L+ I+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENA---LLKATDFGLSVFFEEGKVYREIVGSPYY 178
V H + H DLKPEN + D N +K DFGL+ + G ++ I G+P +
Sbjct: 126 GVYYLHSLQIAHFDLKPENIML--LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 179 IAPEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPS 210
+APE++ L Q A + F+ + F +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLK 242
S+ A + + R+L +DPK+R+ I + HPW+K
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 62/273 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVE 85
E+V+ +Y G+ELG G+F + C E STGLQ+A K I KR+ + ++D+ EV
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P++ LFD + + +E A L+ I+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENA---LLKATDFGLSVFFEEGKVYREIVGSPYY 178
V H + H DLKPEN + D N +K DFGL+ + G ++ I G+P +
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 179 IAPEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPS 210
+APE++ L Q A + F+ + F +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLK 242
S+ A + + R+L +DPK+R+ I + HPW+K
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 62/273 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV---KDYEKDDVRGEVE 85
E+V+ +Y G+ELG G F + C E STGLQ+A K I KR+ + ++D+ EV
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P++ LFD + + +E A L+ I+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN 125
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENA---LLKATDFGLSVFFEEGKVYREIVGSPYY 178
V H + H DLKPEN + D N +K DFGL+ + G ++ I G+P +
Sbjct: 126 GVYYLHSLQIAHFDLKPENIMLL--DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 179 IAPEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPS 210
+APE++ L Q A + F+ + F +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLK 242
S+ A + + R+L +DPK+R+ I + HPW+K
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 135/291 (46%), Gaps = 58/291 (19%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKL-VKDYEKDDVRGEV--------- 84
Y + +++G+G F + C + TG ++A K I+ +KL +D++K + +
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNI 65
Query: 85 ---------EVMQYL------SGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
E YL G+ LF+ IVAR +YSE A+ ++ I+ V CH
Sbjct: 66 VRLHDSISEEGFHYLVFDLVTGGE---LFEDIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVLLQKM 188
GV+HRDLKPEN L S + A +K DFGL++ + + + + G+P Y++PEVL ++
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEA 182
Query: 189 ---------------------------DQ-RVDAAILKGEINFQRDPFPSASSSAIELVH 220
DQ ++ I G +F + + + A L++
Sbjct: 183 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 242
Query: 221 RMLTQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQNTAMNKLK 270
+MLT +P +RI A + + HPW+ + + + +K+ A KLK
Sbjct: 243 QMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 131/305 (42%), Gaps = 61/305 (20%)
Query: 28 YEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKD--YEKDDVRGEVE 85
+EDV Y + + +G+G F + C TG QFA K + K +D++ E
Sbjct: 22 FEDV---YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 86 VMQYLS--------------GQPSILFD---------RIVARGH----YSERAAAAVLRV 118
+ L G ++F+ IV R YSE A+ +R
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPY 177
I+ + CH ++HRD+KPEN L S + +A +K DFG+++ E G V VG+P+
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPH 198
Query: 178 YIAPEVLLQK---------------------------MDQRVDAAILKGEINFQRDPFPS 210
++APEV+ ++ +R+ I+KG+ +
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSH 258
Query: 211 ASSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQNTAMNKL 269
S SA +LV RML DP RI + + HPWLKE + K + ++++ A KL
Sbjct: 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKL 318
Query: 270 KKLAL 274
K L
Sbjct: 319 KGAVL 323
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 148/349 (42%), Gaps = 82/349 (23%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----------VRGEVEVMQ 88
++LG G +G LC E + + A K I K + K DD + E+ +++
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 89 YLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVN 124
L P+I LF++I+ R + E AA +++ I+ +
Sbjct: 102 SLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGIC 160
Query: 125 VCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
H ++HRD+KPEN L + + +K DFGLS FF + R+ +G+ YYIAPEVL
Sbjct: 161 YLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL 220
Query: 185 LQKMDQRVDA---------------------------AILKGEINFQRDPFPSASSSAIE 217
+K +++ D + KG+ F + + + S A E
Sbjct: 221 KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKE 280
Query: 218 LVHRMLTQDPKRRIIAAQVVHP-WLKESG---EASDKPIDTAVIFRMKQNTAMNKLKKLA 273
L+ MLT D +R A + ++ W+K+ SD+ + M++ KL + A
Sbjct: 281 LIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAA 340
Query: 274 LKWHSYDELREGSAKLGSTLTGFNAKQYM----QAADIDGNGTIDYIEL 318
+ + +GS LT ++ + + D +G+G +D EL
Sbjct: 341 ILF------------IGSKLTTLEERKELTDIFKKLDKNGDGQLDKKEL 377
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 67/266 (25%)
Query: 41 LGRGEFGITYLCTENSTGLQFACK--SISKRKLVKDY---EKDDVRGEVEVMQYLSGQPS 95
+GRG + C +TG +FA K ++ +L + ++ R E +++ ++G P
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 96 I------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
I LFD + + SE+ +++R ++ V+ H +
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNI 221
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQ- 190
+HRDLKPEN L D+N ++ +DFG S E G+ RE+ G+P Y+APE+L MD+
Sbjct: 222 VHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDET 278
Query: 191 ------RVDA---------------------------AILKGEINFQRDPFPSASSSAIE 217
VD I++G+ F + SS+ +
Sbjct: 279 HPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKD 338
Query: 218 LVHRMLTQDPKRRIIAAQVV-HPWLK 242
L+ R+L DP+ R+ A Q + HP+ +
Sbjct: 339 LISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 66/295 (22%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKL-VKDYEKDDVRGEVEVMQYLSGQ 93
Y + +ELG+G F + C + + ++A K I+ +KL +D++K + E + + L
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQK--LEREARICRLLK-H 89
Query: 94 PSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
P+I LF+ IVAR +YSE A+ + I+ VN H
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVLLQ-- 186
++HRDLKPEN L S + A +K DFGL++ + E + + G+P Y++PEVL +
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDP 209
Query: 187 ------------------------------KMDQRVDAAILKGEINFQRDPFPSASSSAI 216
K+ Q++ A G +F + + + A
Sbjct: 210 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKA----GAYDFPSPEWDTVTPEAK 265
Query: 217 ELVHRMLTQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQNTAMNKLK 270
L+++MLT +P +RI A Q + HPW+ + + + +++ A KLK
Sbjct: 266 NLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLK 320
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 70/285 (24%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYE---KDDVRGEVE 85
+ VE Y IG+ELG G+F I C E STGL++A K I KR+ ++++ EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 86 VMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMG 121
+++ + P+I LFD + + SE A + ++ I+
Sbjct: 68 ILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDEN---ALLKATDFGLSVFFEEGKVYREIVGSPYY 178
VN H + + H DLKPEN + D+N +K DFGL+ E+G ++ I G+P +
Sbjct: 127 GVNYLHTKKIAHFDLKPENIML--LDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEF 184
Query: 179 IAPEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPS 210
+APE++ L Q A I +F + F
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQ 244
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLKESGEASDKPIDT 254
S A + + ++L ++ ++R+ I + HPW+ P+DT
Sbjct: 245 TSELAKDFIRKLLVKETRKRLTIQEALRHPWI--------TPVDT 281
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 123/289 (42%), Gaps = 70/289 (24%)
Query: 34 HYTIG---KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYL 90
HY + K LG G F I C + FA K ISKR + + + E+ ++
Sbjct: 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM------EANTQKEITALKLC 62
Query: 91 SGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVC 126
G P+I LF+RI + H+SE A+ ++R ++ V+
Sbjct: 63 EGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHM 122
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFF-EEGKVYREIVGSPYYIAPEVLL 185
H GV+HRDLKPEN LFT ++N +K DFG + + + + + +Y APE+L
Sbjct: 123 HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLN 182
Query: 186 QK-MDQRVD----------------------------------AAILKGEINFQRDPFPS 210
Q D+ D I KG+ +F+ + + +
Sbjct: 183 QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKN 242
Query: 211 ASSSAIELVHRMLTQDPKRRI-IAAQVVHPWLKESGEASDKPIDTAVIF 258
S A +L+ +LT DP +R+ ++ + WL++ + S P+ T I
Sbjct: 243 VSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDIL 291
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 119/271 (43%), Gaps = 60/271 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRK---LVKDYEKDDVRGEVE 85
+ VE Y IG+ELG G+F I C E STGL++A K I KR+ + ++++ EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 86 VMQYLSGQPSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGV 122
+++ + I LFD + + SE A + ++ I+
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDEN---ALLKATDFGLSVFFEEGKVYREIVGSPYYI 179
VN H + + H DLKPEN + D+N +K DFGL+ E+G ++ I G+P ++
Sbjct: 128 VNYLHTKKIAHFDLKPENIML--LDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 180 APEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPSA 211
APE++ L Q A I +F + F
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWL 241
S A + + ++L ++ ++R+ + + HPW+
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 60/271 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRK---LVKDYEKDDVRGEVE 85
+ VE Y IG+ELG G+F I C E STGL++A K I KR+ + ++++ EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 86 VMQYLSGQPSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGV 122
+++ + I LFD + + SE A + ++ I+
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDEN---ALLKATDFGLSVFFEEGKVYREIVGSPYYI 179
VN H + + H DLKPEN + D+N +K DFGL+ E+G ++ I G+P ++
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLL--DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 180 APEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPSA 211
APE++ L Q A I +F + F
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 212 SSSAIELVHRMLTQDPKRRI-IAAQVVHPWL 241
S A + + ++L ++ ++R+ I + HPW+
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 60/271 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRK---LVKDYEKDDVRGEVE 85
+ VE Y IG+ELG G+F I C E STGL++A K I KR+ + ++++ EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 86 VMQYLSGQPSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGV 122
+++ + I LFD + + SE A + ++ I+
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDEN---ALLKATDFGLSVFFEEGKVYREIVGSPYYI 179
VN H + + H DLKPEN + D+N +K DFGL+ E+G ++ I G+P ++
Sbjct: 128 VNYLHTKKIAHFDLKPENIML--LDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 180 APEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPSA 211
APE++ L Q A I +F + F
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 212 SSSAIELVHRMLTQDPKRRI-IAAQVVHPWL 241
S A + + ++L ++ ++R+ I + HPW+
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 60/271 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRK---LVKDYEKDDVRGEVE 85
+ VE Y IG+ELG G+F I C E STGL++A K I KR+ + ++++ EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 86 VMQYLSGQPSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGV 122
+++ + I LFD + + SE A + ++ I+
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDEN---ALLKATDFGLSVFFEEGKVYREIVGSPYYI 179
VN H + + H DLKPEN + D+N +K DFGL+ E+G ++ I G+P ++
Sbjct: 128 VNYLHTKKIAHFDLKPENIML--LDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 180 APEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPSA 211
APE++ L Q A I +F + F
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 212 SSSAIELVHRMLTQDPKRRI-IAAQVVHPWL 241
S A + + ++L ++ ++R+ I + HPW+
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 60/271 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRK---LVKDYEKDDVRGEVE 85
+ VE Y IG+ELG G+F I C E STGL++A K I KR+ + ++++ EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 86 VMQYLSGQPSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGV 122
+++ + I LFD + + SE A + ++ I+
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDEN---ALLKATDFGLSVFFEEGKVYREIVGSPYYI 179
VN H + + H DLKPEN + D+N +K DFGL+ E+G ++ I G+P ++
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLL--DKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 180 APEVL----------------------------LQKMDQRVDAAILKGEINFQRDPFPSA 211
APE++ L Q A I +F + F
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 212 SSSAIELVHRMLTQDPKRRI-IAAQVVHPWL 241
S A + + ++L ++ ++R+ I + HPW+
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 58/265 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ ++LG G FG +L E S+GL+ K+I+K + + + E+EV++ L P
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLD-HP 80
Query: 95 SI------------------------LFDRIV---ARGH-YSERAAAAVLRVIMGVVNVC 126
+I L +RIV ARG SE A +++ +M +
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H + V+H+DLKPEN LF ++ +K DFGL+ F+ + G+ Y+APEV +
Sbjct: 141 HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR 200
Query: 187 KMDQRVDA--------AILKGEINFQ-------------RDPFPSA-----SSSAIELVH 220
+ + D +L G + F ++P + + A++L+
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLK 260
Query: 221 RMLTQDPKRRIIAAQVV-HPWLKES 244
+MLT+DP+RR AAQV+ H W K++
Sbjct: 261 QMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 128/305 (41%), Gaps = 61/305 (20%)
Query: 28 YEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKD--YEKDDVRGEVE 85
+EDV Y + + +G+G F + C TG QFA K + K +D++ E
Sbjct: 22 FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 86 VMQYLS--------------GQPSILFD---------RIVARGH----YSERAAAAVLRV 118
+ L G ++F+ IV R YSE A+ +R
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPY 177
I+ + CH ++HRD+KP L S + +A +K FG+++ E G V VG+P+
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 198
Query: 178 YIAPEVLLQK---------------------------MDQRVDAAILKGEINFQRDPFPS 210
++APEV+ ++ +R+ I+KG+ +
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSH 258
Query: 211 ASSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQNTAMNKL 269
S SA +LV RML DP RI + + HPWLKE + K + ++++ A KL
Sbjct: 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKL 318
Query: 270 KKLAL 274
K L
Sbjct: 319 KGAVL 323
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 128/305 (41%), Gaps = 61/305 (20%)
Query: 28 YEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKD--YEKDDVRGEVE 85
+EDV Y + + +G+G F + C TG QFA K + K +D++ E
Sbjct: 24 FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 80
Query: 86 VMQYLS--------------GQPSILFD---------RIVARGH----YSERAAAAVLRV 118
+ L G ++F+ IV R YSE A+ +R
Sbjct: 81 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 140
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPY 177
I+ + CH ++HRD+KP L S + +A +K FG+++ E G V VG+P+
Sbjct: 141 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 200
Query: 178 YIAPEVLLQK---------------------------MDQRVDAAILKGEINFQRDPFPS 210
++APEV+ ++ +R+ I+KG+ +
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSH 260
Query: 211 ASSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQNTAMNKL 269
S SA +LV RML DP RI + + HPWLKE + K + ++++ A KL
Sbjct: 261 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKL 320
Query: 270 KKLAL 274
K L
Sbjct: 321 KGAVL 325
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 119/287 (41%), Gaps = 56/287 (19%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE-------- 85
HY +G LG G FG + TG + A K ++++K+ +R E++
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 86 -----------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHC 128
VM+Y+SG LFD I G E+ + + + I+ V+ CH
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSG--GELFDYICKNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM 188
V+HRDLKPEN L D + K DFGLS +G+ R GSP Y APEV+ ++
Sbjct: 135 HMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRL 191
Query: 189 --DQRVDA--------AILKGEINFQRDPFPS---------------ASSSAIELVHRML 223
VD A+L G + F D P+ + S I L+ ML
Sbjct: 192 YAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHML 251
Query: 224 TQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQNTAMNKL 269
DP +R + H W K+ P D + M + A+ ++
Sbjct: 252 QVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEV 298
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 116/289 (40%), Gaps = 73/289 (25%)
Query: 35 YTIGKE-LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
Y + K+ LG G G C TG + A K + Y+ R EV+ SG
Sbjct: 11 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL--------YDSPKARQEVDHHWQASGG 62
Query: 94 PSI----------------------------LFDRIVARGH--YSERAAAAVLRVIMGVV 123
P I LF RI RG ++ER AA ++R I +
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 124 NVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEV 183
H + HRD+KPEN L+TS +++A+LK TDFG + + + + +PYY+APEV
Sbjct: 123 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-QTPCYTPYYVAPEV 181
Query: 184 L-LQKMDQRVDAAILK-------------------------------GEINFQRDPFPSA 211
L +K D+ D L G+ F +
Sbjct: 182 LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEV 241
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFR 259
S A +L+ +L DP R+ Q + HPW+ +S P+ TA + +
Sbjct: 242 SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQ 290
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 116/289 (40%), Gaps = 73/289 (25%)
Query: 35 YTIGKE-LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
Y + K+ LG G G C TG + A K + Y+ R EV+ SG
Sbjct: 30 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL--------YDSPKARQEVDHHWQASGG 81
Query: 94 PSI----------------------------LFDRIVARGH--YSERAAAAVLRVIMGVV 123
P I LF RI RG ++ER AA ++R I +
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 124 NVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEV 183
H + HRD+KPEN L+TS +++A+LK TDFG + + + + +PYY+APEV
Sbjct: 142 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL-QTPCYTPYYVAPEV 200
Query: 184 L-LQKMDQRVDAAILK-------------------------------GEINFQRDPFPSA 211
L +K D+ D L G+ F +
Sbjct: 201 LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEV 260
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFR 259
S A +L+ +L DP R+ Q + HPW+ +S P+ TA + +
Sbjct: 261 SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQ 309
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 106/258 (41%), Gaps = 53/258 (20%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
+Y I K LG G FG L +TG + A K I+K+ L K + + E+ ++ L
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-H 72
Query: 94 PSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
P I LFD IV R SE+ A + I+ V CH
Sbjct: 73 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 132
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-- 188
++HRDLKPEN L DE+ +K DFGLS +G + GSP Y APEV+ K+
Sbjct: 133 IVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 189
Query: 189 DQRVDA--------AILKGEINFQRDPFPS---------------ASSSAIELVHRMLTQ 225
VD +L + F + P S A L+ RML
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 249
Query: 226 DPKRRIIAAQVVH-PWLK 242
+P RI +++ W K
Sbjct: 250 NPLNRISIHEIMQDDWFK 267
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 106/258 (41%), Gaps = 53/258 (20%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
+Y I K LG G FG L +TG + A K I+K+ L K + + E+ ++ L
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-H 73
Query: 94 PSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
P I LFD IV R SE+ A + I+ V CH
Sbjct: 74 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 133
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-- 188
++HRDLKPEN L DE+ +K DFGLS +G + GSP Y APEV+ K+
Sbjct: 134 IVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 190
Query: 189 DQRVDA--------AILKGEINFQRDPFPS---------------ASSSAIELVHRMLTQ 225
VD +L + F + P S A L+ RML
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 250
Query: 226 DPKRRIIAAQVVH-PWLK 242
+P RI +++ W K
Sbjct: 251 NPLNRISIHEIMQDDWFK 268
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 106/258 (41%), Gaps = 53/258 (20%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
+Y I K LG G FG L +TG + A K I+K+ L K + + E+ ++ L
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-H 63
Query: 94 PSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
P I LFD IV R SE+ A + I+ V CH
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-- 188
++HRDLKPEN L DE+ +K DFGLS +G + GSP Y APEV+ K+
Sbjct: 124 IVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 189 DQRVDA--------AILKGEINFQRDPFPS---------------ASSSAIELVHRMLTQ 225
VD +L + F + P S A L+ RML
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 240
Query: 226 DPKRRIIAAQVVH-PWLK 242
+P RI +++ W K
Sbjct: 241 NPLNRISIHEIMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 106/258 (41%), Gaps = 53/258 (20%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
+Y I K LG G FG L +TG + A K I+K+ L K + + E+ ++ L
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-H 67
Query: 94 PSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
P I LFD IV R SE+ A + I+ V CH
Sbjct: 68 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 127
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-- 188
++HRDLKPEN L DE+ +K DFGLS +G + GSP Y APEV+ K+
Sbjct: 128 IVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 184
Query: 189 DQRVDA--------AILKGEINFQRDPFPS---------------ASSSAIELVHRMLTQ 225
VD +L + F + P S A L+ RML
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 244
Query: 226 DPKRRIIAAQVVH-PWLK 242
+P RI +++ W K
Sbjct: 245 NPLNRISIHEIMQDDWFK 262
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 37/209 (17%)
Query: 86 VMQYLSGQPSILFDRIVARGH--YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLF 143
VM+ L G LF RI RG ++ER A+ +++ I + H + HRD+KPEN L+
Sbjct: 91 VMECLDG--GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 148
Query: 144 TSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL-LQKMDQRVDAAIL----- 197
TS NA+LK TDFG + E +PYY+APEVL +K D+ D L
Sbjct: 149 TSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 208
Query: 198 ---------------------KGEINFQRDPFPSASSSAIE-----LVHRMLTQDPKRRI 231
K I + FP+ S + L+ +L +P +R+
Sbjct: 209 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 268
Query: 232 IAAQVV-HPWLKESGEASDKPIDTAVIFR 259
+ + HPW+ +S + P+ T+ + +
Sbjct: 269 TITEFMNHPWIMQSTKVPQTPLHTSRVLK 297
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 110/265 (41%), Gaps = 64/265 (24%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE-------- 85
HY +G LG G FG + TG + A K ++++K+ DV G+++
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI----RSLDVVGKIKREIQNLKL 67
Query: 86 ---------------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVN 124
VM+Y+SG LFD I G E A + + I+ V+
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGE--LFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 125 VCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKPEN L D + K DFGLS +G+ R+ GSP Y APEV+
Sbjct: 126 YCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVI 182
Query: 185 LQKM--DQRVDA--------AILKGEINFQRDPFPS---------------ASSSAIELV 219
++ VD A+L G + F + P+ + S L+
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLL 242
Query: 220 HRMLTQDP-KRRIIAAQVVHPWLKE 243
ML DP KR I H W K+
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 113/268 (42%), Gaps = 71/268 (26%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
Y + +++G G + + C +T ++FA K I K K D E+E++ P
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDK-------SKRDPTEEIEILLRYGQHP 76
Query: 95 SI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+I L D+I+ + +SER A+AVL I V H +G
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 131 VMHRDLKPENFLFTSWDENA-LLKATDFGLSVFFEEGKVYREIVGSPYY----IAPEVL- 184
V+HRDLKP N L+ N ++ DFG F ++ + ++ +P Y +APEVL
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFG---FAKQLRAENGLLMTPCYTANFVAPEVLE 193
Query: 185 LQKMDQRVDA--------AILKGEINFQRDP----------------------FPSASSS 214
Q D D +L G F P + S S +
Sbjct: 194 RQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDT 253
Query: 215 AIELVHRMLTQDPKRRIIAAQVV-HPWL 241
A +LV +ML DP +R+ AA V+ HPW+
Sbjct: 254 AKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 103/256 (40%), Gaps = 53/256 (20%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
Y I + LG G FG L T T + A K IS++ L K V E+ ++ L P
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HP 69
Query: 95 SI-----------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
I LFD IV + +E + I+ + CH +
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM--D 189
+HRDLKPEN L D+N +K DFGLS +G + GSP Y APEV+ K+
Sbjct: 130 VHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAG 186
Query: 190 QRVDA--------AILKGEINFQRDPFPS---------------ASSSAIELVHRMLTQD 226
VD +L G + F + P+ S A L+ RM+ D
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVAD 246
Query: 227 PKRRIIAAQVVH-PWL 241
P +RI ++ PW
Sbjct: 247 PMQRITIQEIRRDPWF 262
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 109/265 (41%), Gaps = 64/265 (24%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE-------- 85
HY +G LG G FG + TG + A K ++++K+ DV G+++
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI----RSLDVVGKIKREIQNLKL 67
Query: 86 ---------------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVN 124
VM+Y+SG LFD I G E A + + I+ V+
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGE--LFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 125 VCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKPEN L D + K DFGLS +G+ R GSP Y APEV+
Sbjct: 126 YCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVI 182
Query: 185 LQKM--DQRVDA--------AILKGEINFQRDPFPS---------------ASSSAIELV 219
++ VD A+L G + F + P+ + S L+
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLL 242
Query: 220 HRMLTQDP-KRRIIAAQVVHPWLKE 243
ML DP KR I H W K+
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 43/212 (20%)
Query: 86 VMQYLSGQPSILFDRIVARGH--YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLF 143
VM+ L G LF RI RG ++ER A+ +++ I + H + HRD+KPEN L+
Sbjct: 143 VMECLDG--GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 200
Query: 144 TSWDENALLKATDFGLSVFFEEGKVYREIVG---SPYYIAPEVL-LQKMDQRVDA----- 194
TS NA+LK TDFG F +E + + +PYY+APEVL +K D+ D
Sbjct: 201 TSKRPNAILKLTDFG---FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 257
Query: 195 ------------------AI---LKGEINFQRDPFPSASSSAIE-----LVHRMLTQDPK 228
AI +K I + FP+ S + L+ +L +P
Sbjct: 258 IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPT 317
Query: 229 RRIIAAQVV-HPWLKESGEASDKPIDTAVIFR 259
+R+ + + HPW+ +S + P+ T+ + +
Sbjct: 318 QRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 349
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 43/212 (20%)
Query: 86 VMQYLSGQPSILFDRIVARGH--YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLF 143
VM+ L G LF RI RG ++ER A+ +++ I + H + HRD+KPEN L+
Sbjct: 137 VMECLDG--GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 194
Query: 144 TSWDENALLKATDFGLSVFFEEGKVYREIVG---SPYYIAPEVL-LQKMDQRVDA----- 194
TS NA+LK TDFG F +E + + +PYY+APEVL +K D+ D
Sbjct: 195 TSKRPNAILKLTDFG---FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 251
Query: 195 ------------------AI---LKGEINFQRDPFPSASSSAIE-----LVHRMLTQDPK 228
AI +K I + FP+ S + L+ +L +P
Sbjct: 252 IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPT 311
Query: 229 RRIIAAQVV-HPWLKESGEASDKPIDTAVIFR 259
+R+ + + HPW+ +S + P+ T+ + +
Sbjct: 312 QRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 343
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 37/209 (17%)
Query: 86 VMQYLSGQPSILFDRIVARGH--YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLF 143
VM+ L G LF RI RG ++ER A+ +++ I + H + HRD+KPEN L+
Sbjct: 107 VMECLDG--GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 164
Query: 144 TSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL-LQKMDQRVD--------- 193
TS NA+LK TDFG + +PYY+APEVL +K D+ D
Sbjct: 165 TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 224
Query: 194 -----------------AAILKGEINFQRDPFPSASSSAIE-----LVHRMLTQDPKRRI 231
+ +K I + FP+ S + L+ +L +P +R+
Sbjct: 225 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 284
Query: 232 IAAQVV-HPWLKESGEASDKPIDTAVIFR 259
+ + HPW+ +S + P+ T+ + +
Sbjct: 285 TITEFMNHPWIMQSTKVPQTPLHTSRVLK 313
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 37/209 (17%)
Query: 86 VMQYLSGQPSILFDRIVARGH--YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLF 143
VM+ L G LF RI RG ++ER A+ +++ I + H + HRD+KPEN L+
Sbjct: 93 VMECLDG--GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 150
Query: 144 TSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL-LQKMDQRVDAAIL----- 197
TS NA+LK TDFG + +PYY+APEVL +K D+ D L
Sbjct: 151 TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 210
Query: 198 ---------------------KGEINFQRDPFPSASSSAIE-----LVHRMLTQDPKRRI 231
K I + FP+ S + L+ +L +P +R+
Sbjct: 211 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 270
Query: 232 IAAQVV-HPWLKESGEASDKPIDTAVIFR 259
+ + HPW+ +S + P+ T+ + +
Sbjct: 271 TITEFMNHPWIMQSTKVPQTPLHTSRVLK 299
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 43/212 (20%)
Query: 86 VMQYLSGQPSILFDRIVARGH--YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLF 143
VM+ L G LF RI RG ++ER A+ +++ I + H + HRD+KPEN L+
Sbjct: 93 VMECLDG--GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 150
Query: 144 TSWDENALLKATDFGLSVFFEEGKVYREIVG---SPYYIAPEVL-LQKMDQRVD------ 193
TS NA+LK TDFG F +E + + +PYY+APEVL +K D+ D
Sbjct: 151 TSKRPNAILKLTDFG---FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 207
Query: 194 --------------------AAILKGEINFQRDPFPSASSSAIE-----LVHRMLTQDPK 228
+ +K I + FP+ S + L+ +L +P
Sbjct: 208 IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPT 267
Query: 229 RRIIAAQVV-HPWLKESGEASDKPIDTAVIFR 259
+R+ + + HPW+ +S + P+ T+ + +
Sbjct: 268 QRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 299
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 37/209 (17%)
Query: 86 VMQYLSGQPSILFDRIVARGH--YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLF 143
VM+ L G LF RI RG ++ER A+ +++ I + H + HRD+KPEN L+
Sbjct: 99 VMECLDG--GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 156
Query: 144 TSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL-LQKMDQRVD--------- 193
TS NA+LK TDFG + +PYY+APEVL +K D+ D
Sbjct: 157 TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 216
Query: 194 -----------------AAILKGEINFQRDPFPSASSSAIE-----LVHRMLTQDPKRRI 231
+ +K I + FP+ S + L+ +L +P +R+
Sbjct: 217 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 276
Query: 232 IAAQVV-HPWLKESGEASDKPIDTAVIFR 259
+ + HPW+ +S + P+ T+ + +
Sbjct: 277 TITEFMNHPWIMQSTKVPQTPLHTSRVLK 305
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 37/209 (17%)
Query: 86 VMQYLSGQPSILFDRIVARGH--YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLF 143
VM+ L G LF RI RG ++ER A+ +++ I + H + HRD+KPEN L+
Sbjct: 91 VMECLDG--GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 148
Query: 144 TSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL-LQKMDQRVDAAIL----- 197
TS NA+LK TDFG + +PYY+APEVL +K D+ D L
Sbjct: 149 TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 208
Query: 198 ---------------------KGEINFQRDPFPSASSSAIE-----LVHRMLTQDPKRRI 231
K I + FP+ S + L+ +L +P +R+
Sbjct: 209 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 268
Query: 232 IAAQVV-HPWLKESGEASDKPIDTAVIFR 259
+ + HPW+ +S + P+ T+ + +
Sbjct: 269 TITEFMNHPWIMQSTKVPQTPLHTSRVLK 297
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 37/209 (17%)
Query: 86 VMQYLSGQPSILFDRIVARGH--YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLF 143
VM+ L G LF RI RG ++ER A+ +++ I + H + HRD+KPEN L+
Sbjct: 97 VMECLDG--GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 154
Query: 144 TSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL-LQKMDQRVD--------- 193
TS NA+LK TDFG + +PYY+APEVL +K D+ D
Sbjct: 155 TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 214
Query: 194 -----------------AAILKGEINFQRDPFPSASSSAIE-----LVHRMLTQDPKRRI 231
+ +K I + FP+ S + L+ +L +P +R+
Sbjct: 215 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 274
Query: 232 IAAQVV-HPWLKESGEASDKPIDTAVIFR 259
+ + HPW+ +S + P+ T+ + +
Sbjct: 275 TITEFMNHPWIMQSTKVPQTPLHTSRVLK 303
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 37/209 (17%)
Query: 86 VMQYLSGQPSILFDRIVARGH--YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLF 143
VM+ L G LF RI RG ++ER A+ +++ I + H + HRD+KPEN L+
Sbjct: 98 VMECLDG--GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 155
Query: 144 TSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL-LQKMDQRVD--------- 193
TS NA+LK TDFG + +PYY+APEVL +K D+ D
Sbjct: 156 TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 215
Query: 194 -----------------AAILKGEINFQRDPFPSASSSAIE-----LVHRMLTQDPKRRI 231
+ +K I + FP+ S + L+ +L +P +R+
Sbjct: 216 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 275
Query: 232 IAAQVV-HPWLKESGEASDKPIDTAVIFR 259
+ + HPW+ +S + P+ T+ + +
Sbjct: 276 TITEFMNHPWIMQSTKVPQTPLHTSRVLK 304
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 37/209 (17%)
Query: 86 VMQYLSGQPSILFDRIVARGH--YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLF 143
VM+ L G LF RI RG ++ER A+ +++ I + H + HRD+KPEN L+
Sbjct: 92 VMECLDG--GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 149
Query: 144 TSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL-LQKMDQRVDAAIL----- 197
TS NA+LK TDFG + +PYY+APEVL +K D+ D L
Sbjct: 150 TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 209
Query: 198 ---------------------KGEINFQRDPFPSASSSAIE-----LVHRMLTQDPKRRI 231
K I + FP+ S + L+ +L +P +R+
Sbjct: 210 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 269
Query: 232 IAAQVV-HPWLKESGEASDKPIDTAVIFR 259
+ + HPW+ +S + P+ T+ + +
Sbjct: 270 TITEFMNHPWIMQSTKVPQTPLHTSRVLK 298
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 115/267 (43%), Gaps = 54/267 (20%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E A K + K +L K+ + +R E+E+ +L P
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 75
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + G + E+ +A + + ++ CH R
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 135
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L E LK DFG SV + R + G+ Y+ PE++ K D
Sbjct: 136 VIHRDIKPENLLMGYKGE---LKIADFGWSVHAPSLR-RRXMCGTLDYLPPEMIEGKTHD 191
Query: 190 QRVD---AAILKGEINFQRDPF--------------------PSASSSAIELVHRMLTQD 226
++VD A +L E PF P S + +L+ ++L
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 251
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKPI 252
P +R+ V+ HPW+K + P+
Sbjct: 252 PPQRLPLKGVMEHPWVKANSRRVLPPV 278
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 115/267 (43%), Gaps = 54/267 (20%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E A K + K +L K+ + +R E+E+ +L P
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 74
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + G + E+ +A + + ++ CH R
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L E LK DFG SV + R + G+ Y+ PE++ K D
Sbjct: 135 VIHRDIKPENLLMGYKGE---LKIADFGWSVHAPSLR-RRXMCGTLDYLPPEMIEGKTHD 190
Query: 190 QRVD---AAILKGEINFQRDPF--------------------PSASSSAIELVHRMLTQD 226
++VD A +L E PF P S + +L+ ++L
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 250
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKPI 252
P +R+ V+ HPW+K + P+
Sbjct: 251 PPQRLPLKGVMEHPWVKANSRRVLPPV 277
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 55/272 (20%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSIS--------------------KRKLVKD 74
Y I ++LGRGEFGI + C E S+ + K + R ++
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHL 66
Query: 75 YEKDDVRGE-VEVMQYLSGQPSILFDRI-VARGHYSERAAAAVLRVIMGVVNVCHCRGVM 132
+E + E V + +++SG +F+RI + +ER + + + + H +
Sbjct: 67 HESFESMEELVMIFEFISGLD--IFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG 124
Query: 133 HRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEV--------- 183
H D++PEN ++ + ++ +K +FG + + G +R + +P Y APEV
Sbjct: 125 HFDIRPENIIYQT-RRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTA 183
Query: 184 -------------------LLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLT 224
L + +Q++ I+ E F + F S A++ V R+L
Sbjct: 184 TDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLV 243
Query: 225 QDPKRRIIAAQVV-HPWLKESGE-ASDKPIDT 254
++ K R+ A++ + HPWLK+ E S K I T
Sbjct: 244 KERKSRMTASEALQHPWLKQKIERVSTKVIRT 275
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + E+ G+ Y+ PE++ +M D
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTELCGTLDYLPPEMIEGRMHD 184
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 245 PSQRPMLREVLEHPWITAN---SSKP 267
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HP 72
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S N LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 133 VIHRDIKPENLLLGS---NGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 188
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E PF + + A +L+ R+L +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHN 248
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
+R+ A+V+ HPW+K + S KP
Sbjct: 249 ASQRLTLAEVLEHPWIKAN---SSKP 271
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 112/270 (41%), Gaps = 71/270 (26%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
Y + + +G G + C +T +++A K I K K D E+E++ P
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDK-------SKRDPSEEIEILLRYGQHP 81
Query: 95 SI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+I L D+I+ + +SER A+ VL I V H +G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 131 VMHRDLKPENFLFTSWDENA-LLKATDFGLSVFFEEGKVYREIVGSPYY----IAPEVL- 184
V+HRDLKP N L+ N L+ DFG F ++ + ++ +P Y +APEVL
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFG---FAKQLRAENGLLMTPCYTANFVAPEVLK 198
Query: 185 LQKMDQRVDA--------AILKGEINFQRDP----------------------FPSASSS 214
Q D+ D +L G F P + + S +
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 215 AIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
A +LV +ML DP +R+ A QV+ HPW+ +
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 112/270 (41%), Gaps = 71/270 (26%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
Y + + +G G + C +T +++A K I D K D E+E++ P
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVI-------DKSKRDPSEEIEILLRYGQHP 81
Query: 95 SI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+I L D+I+ + +SER A+ VL I V H +G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 131 VMHRDLKPENFLFTSWDENA-LLKATDFGLSVFFEEGKVYREIVGSPYY----IAPEVL- 184
V+HRDLKP N L+ N L+ DFG F ++ + ++ +P Y +APEVL
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFG---FAKQLRAENGLLMTPCYTANFVAPEVLK 198
Query: 185 LQKMDQRVDA--------AILKGEINFQRDP----------------------FPSASSS 214
Q D+ D +L G F P + + S +
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 215 AIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
A +LV +ML DP +R+ A QV+ HPW+ +
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HP 72
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKR 132
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S N LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 133 VIHRDIKPENLLLGS---NGELKIADFGWSVHAPSSR-RDTLCGTLDYLPPEMIEGRMHD 188
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E PF + + A +L+ R+L +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHN 248
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
+R+ A+V+ HPW+K + S KP
Sbjct: 249 ASQRLTLAEVLEHPWIKAN---SSKP 271
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + ++ G+ Y+ PE++ +M D
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHD 184
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 245 PSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + ++ G+ Y+ PE++ +M D
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHD 189
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 250 PSQRPMLREVLEHPWITAN---SSKP 272
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 97 LFDRIVARGH--YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKA 154
LF RI RG ++ER A+ + + I + H + HRD+KPEN L+TS NA+LK
Sbjct: 146 LFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 205
Query: 155 TDFGLSVFFEEGKVYREIVGSPYYIAPEVL-LQKMDQRVD-------------------- 193
TDFG + +PYY+APEVL +K D+ D
Sbjct: 206 TDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYS 265
Query: 194 -----------AAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVV-HPWL 241
I G+ F + S L+ +L +P +R + HPW+
Sbjct: 266 NHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWI 325
Query: 242 KESGEASDKPIDTAVIFR 259
+S + P+ T+ + +
Sbjct: 326 XQSTKVPQTPLHTSRVLK 343
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + ++ G+ Y+ PE++ +M D
Sbjct: 130 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHD 185
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 245
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 246 PSQRPMLREVLEHPWITAN---SSKP 268
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + ++ G+ Y+ PE++ +M D
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRMHD 184
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 245 PSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLXGTLDYLPPEMIEGRMHD 189
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 250 PSQRPMLREVLEHPWITAN---SSKP 272
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 54/256 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 94
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + ++ G+ Y+ PE++ +M D
Sbjct: 155 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RDDLCGTLDYLPPEMIEGRMHD 210
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 270
Query: 227 PKRRIIAAQVV-HPWL 241
P +R + +V+ HPW+
Sbjct: 271 PSQRPMLREVLEHPWI 286
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + ++ G+ Y+ PE++ +M D
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RDDLCGTLDYLPPEMIEGRMHD 187
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 248 PSQRPMLREVLEHPWITAN---SSKP 270
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E ++ A K + K +L K + +R EVE+ +L P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 69 NILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK 128
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHD 184
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 245 PSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 189
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 250 PSQRPMLREVLEHPWITAN---SSKP 272
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 70
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 131 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHD 186
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 246
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 247 PSQRPMLREVLEHPWITAN---SSKP 269
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 85
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 86 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 145
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 146 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 201
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 261
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 262 PSQRPMLREVLEHPWITAN---SSKP 284
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 110/268 (41%), Gaps = 71/268 (26%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
Y + +++G G + + C +T +FA K I K K D E+E++ P
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDK-------SKRDPTEEIEILLRYGQHP 76
Query: 95 SI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+I L D+I+ + +SER A+AVL I V H +G
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 131 VMHRDLKPENFLFTSWDENA-LLKATDFGLSVFFEEGKVYREIVGSPYY----IAPEVL- 184
V+HRDLKP N L+ N ++ DFG F ++ + ++ +P Y +APEVL
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFG---FAKQLRAENGLLXTPCYTANFVAPEVLE 193
Query: 185 LQKMDQRVDA--------AILKGEINFQRDP----------------------FPSASSS 214
Q D D L G F P + S S +
Sbjct: 194 RQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDT 253
Query: 215 AIELVHRMLTQDPKRRIIAAQVV-HPWL 241
A +LV + L DP +R+ AA V+ HPW+
Sbjct: 254 AKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 189
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 250 PSQRPMLREVLEHPWITAN---SSKP 272
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 187
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 248 PSQRPMLREVLEHPWITAN---SSKP 270
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 184
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 245 PSQRPMLREVLEHPWITAN---SSKP 267
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 72
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 132
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 133 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 188
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 189 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 248
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 249 PSQRPMLREVLEHPWITAN---SSKP 271
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHD 187
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 248 PSQRPMLREVLEHPWITAN---SSKP 270
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHD 184
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 245 PSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 94
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 155 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 210
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 270
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 271 PSQRPMLREVLEHPWITAN---SSKP 293
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 67
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 68 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 127
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 128 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 183
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 243
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 244 PSQRPMLREVLEHPWITAN---SSKP 266
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTXLCGTLDYLPPEMIEGRMHD 184
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 245 PSQRPMLREVLEHPWITAN---SSKP 267
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 130 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RDTLCGTLDYLPPEMIEGRMHD 185
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 245
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 246 PSQRPMLREVLEHPWITAN---SSKP 268
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 54/256 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRMHD 187
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 227 PKRRIIAAQVV-HPWL 241
P +R + +V+ HPW+
Sbjct: 248 PSQRPMLREVLEHPWI 263
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 123/301 (40%), Gaps = 79/301 (26%)
Query: 9 QDADHPAARQLHDAILGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSIS- 67
+DA P + H YE E+ LGRG + C T ++A K I
Sbjct: 2 RDAALPGSHSTHG--FYENYEPKEI-------LGRGVSSVVRRCIHKPTCKEYAVKIIDV 52
Query: 68 ------KRKLVKDYEKDDVRGEVEVMQYLSGQPSI------------------------L 97
+ V++ + ++ EV++++ +SG P+I L
Sbjct: 53 TGGGSFSAEEVQELREATLK-EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 111
Query: 98 FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDF 157
FD + + SE+ ++R ++ V+ H ++HRDLKPEN L D++ +K TDF
Sbjct: 112 FDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDF 168
Query: 158 GLSVFFEEGKVYREIVGSPYYIAPEVLLQKMD-------QRVDA---------------- 194
G S + G+ RE+ G+P Y+APE++ M+ + VD
Sbjct: 169 GFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
Query: 195 -----------AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLK 242
I+ G F + S + +LV R L P++R A + + HP+ +
Sbjct: 229 FWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
Query: 243 E 243
+
Sbjct: 289 Q 289
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 129 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRMHD 184
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 245 PSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 54/256 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 187
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 227 PKRRIIAAQVV-HPWL 241
P +R + +V+ HPW+
Sbjct: 248 PSQRPMLREVLEHPWI 263
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 113/269 (42%), Gaps = 70/269 (26%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSIS-------KRKLVKDYEKDDVRGEVEVMQYLSGQ 93
LGRG + C T ++A K I + V++ + ++ EV++++ +SG
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK-EVDILRKVSGH 70
Query: 94 PSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
P+I LFD + + SE+ ++R ++ V+ H
Sbjct: 71 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 130
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMD 189
++HRDLKPEN L D++ +K TDFG S + G+ RE+ G+P Y+APE++ M+
Sbjct: 131 NIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN 187
Query: 190 -------QRVDA---------------------------AILKGEINFQRDPFPSASSSA 215
+ VD I+ G F + S +
Sbjct: 188 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTV 247
Query: 216 IELVHRMLTQDPKRRIIAAQ-VVHPWLKE 243
+LV R L P++R A + + HP+ ++
Sbjct: 248 KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 54/267 (20%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ I + LG+G+FG YL E A K + K +L K+ + +R E+E+ +L P
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 74
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + G + E+ +A + + ++ CH R
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L E LK DFG SV + R + G+ Y+ PE++ K D
Sbjct: 135 VIHRDIKPENLLMGYKGE---LKIADFGWSVHAPSLR-RRXMCGTLDYLPPEMIEGKTHD 190
Query: 190 QRVD---AAILKGEINFQRDPF--------------------PSASSSAIELVHRMLTQD 226
++VD A +L E PF P S + +L+ ++L
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 250
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKPI 252
P +R+ V+ HPW+K + P+
Sbjct: 251 PPQRLPLKGVMEHPWVKANSRRVLPPV 277
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 57/269 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG S + + G+ Y+ PE++ +M D
Sbjct: 130 VIHRDIKPENLLLGSAGE---LKIADFGWSCHAPSSR-RTTLSGTLDYLPPEMIEGRMHD 185
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 245
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKPIDT 254
P +R + +V+ HPW+ + S KP ++
Sbjct: 246 PSQRPMLREVLEHPWITAN---SSKPSNS 271
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 54/256 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E A K + K +L K + +R EVE+ +L P
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 65
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 125
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE++ +M D
Sbjct: 126 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 181
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 182 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 241
Query: 227 PKRRIIAAQVV-HPWL 241
P +R + +V+ HPW+
Sbjct: 242 PSQRPMLREVLEHPWI 257
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 70
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK +FG SV + + G+ Y+ PE++ +M D
Sbjct: 131 VIHRDIKPENLLLGSAGE---LKIANFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 186
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 246
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 247 PSQRPMLREVLEHPWITAN---SSKP 269
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 116/266 (43%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK +FG SV + + G+ Y+ PE++ +M D
Sbjct: 132 VIHRDIKPENLLLGSAGE---LKIANFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRMHD 187
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R + +V+ HPW+ + S KP
Sbjct: 248 PSQRPMLREVLEHPWITAN---SSKP 270
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 79/301 (26%)
Query: 9 QDADHPAARQLHDAILGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSIS- 67
+DA P + H YE E+ LGRG + C T ++A K I
Sbjct: 2 RDAALPGSHSTHG--FYENYEPKEI-------LGRGVSSVVRRCIHKPTCKEYAVKIIDV 52
Query: 68 ------KRKLVKDYEKDDVRGEVEVMQYLSGQPSI------------------------L 97
+ V++ + ++ EV++++ +SG P+I L
Sbjct: 53 TGGGSFSAEEVQELREATLK-EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 111
Query: 98 FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDF 157
FD + + SE+ ++R ++ V+ H ++HRDLKPEN L D++ +K TDF
Sbjct: 112 FDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDF 168
Query: 158 GLSVFFEEGKVYREIVGSPYYIAPEVLLQKMD-------QRVDA---------------- 194
G S + G+ R + G+P Y+APE++ M+ + VD
Sbjct: 169 GFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
Query: 195 -----------AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLK 242
I+ G F + S + +LV R L P++R A + + HP+ +
Sbjct: 229 FWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
Query: 243 E 243
+
Sbjct: 289 Q 289
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 56/261 (21%)
Query: 38 GKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPS-- 95
KELGRG+F + C STG ++A K + KR+ +D + ++ E+ V++ P
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDC-RAEILHEIAVLELAKSCPRVI 92
Query: 96 ------------ILFDRIVARGH------------YSERAAAAVLRVIMGVVNVCHCRGV 131
IL A G SE +++ I+ V H +
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNI 152
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL------- 184
+H DLKP+N L +S +K DFG+S REI+G+P Y+APE+L
Sbjct: 153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITT 212
Query: 185 ---------------------LQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRML 223
+ + +Q I + +++ + F S S A + + +L
Sbjct: 213 ATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLL 272
Query: 224 TQDPKRRIIAAQVV-HPWLKE 243
++P++R A + H WL++
Sbjct: 273 VKNPEKRPTAEICLSHSWLQQ 293
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 109/269 (40%), Gaps = 56/269 (20%)
Query: 26 RTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE 85
+ Y+++ +Y + + +G G F L TG A K + K L D + ++ E+E
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR--IKTEIE 60
Query: 86 VMQYLSGQPSI-----------------------LFDRIVARGHYSERAAAAVLRVIMGV 122
++ L Q LFD I+++ SE V R I+
Sbjct: 61 ALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSA 120
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVY--REIVGSPYYIA 180
V H +G HRDLKPEN LF DE LK DFGL + K Y + GS Y A
Sbjct: 121 VAYVHSQGYAHRDLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAA 177
Query: 181 PEVLLQK-------------------------MDQRVDAAILKGEINFQRDPFPSASSSA 215
PE++ K D A+ K + + D S S+
Sbjct: 178 PELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSS 237
Query: 216 IELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
I L+ +ML DPK+RI ++ HPW+ +
Sbjct: 238 ILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 113/266 (42%), Gaps = 57/266 (21%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K +L K + +R EVE+ +L P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 95 SIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+IL + + + E+ A + + ++ CH +
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L S E LK DFG SV + + G+ Y+ PE + + D
Sbjct: 134 VIHRDIKPENLLLGSAGE---LKIADFGWSVHAPSSR-RTTLCGTLDYLPPEXIEGRXHD 189
Query: 190 QRVD---AAILKGEINFQRDPFPS--------------------ASSSAIELVHRMLTQD 226
++VD +L E + PF + + A +L+ R+L +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKP 251
P +R +V+ HPW+ + S KP
Sbjct: 250 PSQRPXLREVLEHPWITAN---SSKP 272
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 54/266 (20%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ IG+ LG+G+FG YL E + A K + K ++ K+ + +R E+E+ +L P
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH-HP 83
Query: 95 SIL------FDR--------IVARGH----------YSERAAAAVLRVIMGVVNVCHCRG 130
+IL +DR RG + E+ A ++ + + CH +
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK 143
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKM-D 189
V+HRD+KPEN L E + DFG SV + + + G+ Y+ PE++ +M +
Sbjct: 144 VIHRDIKPENLLLGLKGELKI---ADFGWSVHAPSLR-RKTMCGTLDYLPPEMIEGRMHN 199
Query: 190 QRVD---AAILKGEINFQRDPFPSAS--------------------SSAIELVHRMLTQD 226
++VD +L E+ PF SAS + A +L+ ++L +
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLRHN 259
Query: 227 PKRRIIAAQV-VHPWLKESGEASDKP 251
P R+ AQV HPW++ + P
Sbjct: 260 PSERLPLAQVSAHPWVRANSRRVLPP 285
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 110/268 (41%), Gaps = 59/268 (22%)
Query: 31 VELHYTIGKE--LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ 88
V YT+ K LG G FG + C E +TGL+ A K I R + +K++V+ E+ VM
Sbjct: 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMN 141
Query: 89 YLSGQPSI-----------------------LFDRIVARGH-YSERAAAAVLRVIMGVVN 124
L I LFDRI+ + +E ++ I +
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIR 201
Query: 125 VCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
H ++H DLKPEN L + D +K DFGL+ ++ + + G+P ++APEV+
Sbjct: 202 HMHQMYILHLDLKPENILCVNRDAKQ-IKIIDFGLARRYKPREKLKVNFGTPEFLAPEVV 260
Query: 185 ----------------------------LQKMDQRVDAAILKGEINFQRDPFPSASSSAI 216
L D IL + + + F S A
Sbjct: 261 NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAK 320
Query: 217 ELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
E + ++L ++ RI A++ + HPWL +
Sbjct: 321 EFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
+Y + K +G+G F L TG + A + I K +L + R EV +M+ L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLN-H 72
Query: 94 PSIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
P+I+ FD +VA G E+ A A R I+ V CH +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
++HRDLK EN L D + +K DFG S F G E GSP Y APE+
Sbjct: 133 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELF 184
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 86 VMQYLSGQPSILFDRIVARGH--YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLF 143
VM+ L G LF RI RG ++ER A+ +++ I + H + HRD+KPEN L+
Sbjct: 93 VMECLDG--GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 150
Query: 144 TSWDENALLKATDFGLSVFFEEGK-------------VYREIVGSPYYIAPEVLLQKMDQ 190
TS NA+LK TDFG + K +Y + G P + + L +
Sbjct: 151 TSKRPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--AISP 208
Query: 191 RVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKESGEASD 249
+ I G+ F + S L+ +L +P +R+ + + HPW+ +S +
Sbjct: 209 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQ 268
Query: 250 KPIDTAVIFR 259
P+ T+ + +
Sbjct: 269 TPLHTSRVLK 278
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 77/175 (44%), Gaps = 29/175 (16%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKL---------------------- 71
+Y + K +G+G F L TG + A K I K +L
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 72 -VKDYEKDDVRGEVE-VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
VK +E + + VM+Y SG +FD +VA G E+ A A R I+ V CH +
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 133
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
++HRDLK EN L D + +K DFG S F G GSP Y APE+
Sbjct: 134 YIVHRDLKAENLLL---DGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELF 185
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 101/262 (38%), Gaps = 59/262 (22%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
HY I +ELG G FG+ + TE +TG FA K + + +K+ VR E++ M L
Sbjct: 52 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM---TPHESDKETVRKEIQTMSVLR-H 107
Query: 94 PSI------------------------LFDRIV-ARGHYSERAAAAVLRVIMGVVNVCHC 128
P++ LF+++ SE A +R + + H
Sbjct: 108 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 167
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL---- 184
+H DLKPEN +FT+ N LK DFGL+ + + + G+ + APEV
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKP 226
Query: 185 --------------------LQKMDQRVDAAILKG----EINFQRDPFPSASSSAIELVH 220
L D L+ + N F S + +
Sbjct: 227 VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR 286
Query: 221 RMLTQDPKRRIIAAQVV-HPWL 241
++L DP R+ Q + HPWL
Sbjct: 287 KLLLADPNTRMTIHQALEHPWL 308
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 77/175 (44%), Gaps = 29/175 (16%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
+Y + K +G+G F L TG + A K I K +L + R EV +M+ L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLN-H 72
Query: 94 PSIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
P+I+ FD +VA G E+ A A R I+ V CH +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
++HRDLK EN L D + +K DFG S F G GSP Y APE+
Sbjct: 133 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 184
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 102/262 (38%), Gaps = 59/262 (22%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
HY I +ELG G FG+ + TE +TG FA K + + +K+ VR E++ M L
Sbjct: 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMSVLR-H 213
Query: 94 PSI------------------------LFDRIV-ARGHYSERAAAAVLRVIMGVVNVCHC 128
P++ LF+++ SE A +R + + H
Sbjct: 214 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 273
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEV----- 183
+H DLKPEN +FT+ N LK DFGL+ + + + G+ + APEV
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKP 332
Query: 184 ----------------LLQKM-------DQRVDAAILKGEINFQRDPFPSASSSAIELVH 220
LL + D + + N F S + +
Sbjct: 333 VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR 392
Query: 221 RMLTQDPKRRIIAAQVV-HPWL 241
++L DP R+ Q + HPWL
Sbjct: 393 KLLLADPNTRMTIHQALEHPWL 414
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 77/175 (44%), Gaps = 29/175 (16%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
+Y + K +G+G F L TG + A K I K +L + R EV +M+ L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLN-H 72
Query: 94 PSIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
P+I+ FD +VA G E+ A A R I+ V CH +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
++HRDLK EN L D + +K DFG S F G GSP Y APE+
Sbjct: 133 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 184
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 120/298 (40%), Gaps = 66/298 (22%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVM------ 87
+Y I +ELG G FG+ + C E +TG F K I+ + Y V+ E+ +M
Sbjct: 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT---VKNEISIMNQLHHP 108
Query: 88 -------------------QYLSGQPSILFDRIVARGH-YSERAAAAVLRVIMGVVNVCH 127
++LSG LFDRI A + SE +R + H
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSG--GELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 128 CRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPE----- 182
++H D+KPEN + + + + +K DFGL+ ++ + + + APE
Sbjct: 167 EHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDRE 225
Query: 183 ----------------VLLQKM-------DQRVDAAILKGEINFQRDPFPSASSSAIELV 219
VLL + D + + + F D F S S A + +
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFI 285
Query: 220 HRMLTQDPKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKW 276
+L ++P++R+ + HPWLK G+ S+ T+ I + N K+K+ W
Sbjct: 286 KNLLQKEPRKRLTVHDALEHPWLK--GDHSNL---TSRIPSSRYNKIRQKIKEKYADW 338
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 77/175 (44%), Gaps = 29/175 (16%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
+Y + K +G+G F L TG + A K I K +L + R EV +M+ L+
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLN-H 65
Query: 94 PSIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
P+I+ FD +VA G E+ A A R I+ V CH +
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
++HRDLK EN L D + +K DFG S F G GSP Y APE+
Sbjct: 126 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 177
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 77/175 (44%), Gaps = 29/175 (16%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
+Y + K +G+G F L TG + A + I K +L + R EV +M+ L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLN-H 72
Query: 94 PSIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
P+I+ FD +VA G E+ A A R I+ V CH +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
++HRDLK EN L D + +K DFG S F G GSP Y APE+
Sbjct: 133 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 184
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 77/175 (44%), Gaps = 29/175 (16%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
+Y + K +G+G F L TG + A K I K +L + R EV +M+ L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLN-H 72
Query: 94 PSIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
P+I+ FD +VA G E+ A A R I+ V CH +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
++HRDLK EN L D + +K DFG S F G G+P Y APE+
Sbjct: 133 FIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF 184
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 69/278 (24%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRK------------LVKDYEKDDVRGEVE-- 85
++G G GI + T S+G A K + RK +++DY+ ++V VE
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV---VEMY 214
Query: 86 -----------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHR 134
VM++L G L D IV +E AAV ++ ++V H +GV+HR
Sbjct: 215 NSYLVGDELWVVMEFLEG--GALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 271
Query: 135 DLKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPYYIAPEVLLQ-KMDQRV 192
D+K ++ L T + +K +DFG +E + +VG+PY++APE++ + V
Sbjct: 272 DIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 193 DA--------AILKGE-----------INFQRDPFPS-------ASSSAIELVHRMLTQD 226
D ++ GE + RD P S S + R+L +D
Sbjct: 329 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 388
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQN 263
P +R AA+++ HP+L ++G + +++ M+QN
Sbjct: 389 PAQRATAAELLKHPFLAKAGPPA------SIVPLMRQN 420
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 77/175 (44%), Gaps = 29/175 (16%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
+Y + K +G+G F L TG + A K I K +L + R EV +M+ L+
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILN-H 70
Query: 94 PSIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
P+I+ FD +VA G E+ A + R I+ V CH +
Sbjct: 71 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 130
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
++HRDLK EN L D + +K DFG S F G GSP Y APE+
Sbjct: 131 RIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELF 182
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 69/278 (24%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRK------------LVKDYEKDDVRGEVE-- 85
++G G GI + T S+G A K + RK +++DY+ ++V VE
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV---VEMY 87
Query: 86 -----------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHR 134
VM++L G L D IV +E AAV ++ ++V H +GV+HR
Sbjct: 88 NSYLVGDELWVVMEFLEG--GALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 135 DLKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPYYIAPEVLLQ-KMDQRV 192
D+K ++ L T + +K +DFG +E + +VG+PY++APE++ + V
Sbjct: 145 DIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 193 DA--------AILKGE-----------INFQRDPFPS-------ASSSAIELVHRMLTQD 226
D ++ GE + RD P S S + R+L +D
Sbjct: 202 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 261
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQN 263
P +R AA+++ HP+L ++G + +++ M+QN
Sbjct: 262 PAQRATAAELLKHPFLAKAGPPA------SIVPLMRQN 293
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 69/278 (24%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRK------------LVKDYEKDDVRGEVE-- 85
++G G GI + T S+G A K + RK +++DY+ ++V VE
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV---VEMY 137
Query: 86 -----------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHR 134
VM++L G L D IV +E AAV ++ ++V H +GV+HR
Sbjct: 138 NSYLVGDELWVVMEFLEG--GALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 194
Query: 135 DLKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPYYIAPEVLLQ-KMDQRV 192
D+K ++ L T + +K +DFG +E + +VG+PY++APE++ + V
Sbjct: 195 DIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 193 DA--------AILKGE-----------INFQRDPFPS-------ASSSAIELVHRMLTQD 226
D ++ GE + RD P S S + R+L +D
Sbjct: 252 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 311
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQN 263
P +R AA+++ HP+L ++G + +++ M+QN
Sbjct: 312 PAQRATAAELLKHPFLAKAGPPA------SIVPLMRQN 343
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 69/278 (24%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRK------------LVKDYEKDDVRGEVE-- 85
++G G GI + T S+G A K + RK +++DY+ ++V VE
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV---VEMY 92
Query: 86 -----------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHR 134
VM++L G L D IV +E AAV ++ ++V H +GV+HR
Sbjct: 93 NSYLVGDELWVVMEFLEG--GALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 135 DLKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPYYIAPEVLLQ-KMDQRV 192
D+K ++ L T + +K +DFG +E + +VG+PY++APE++ + V
Sbjct: 150 DIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 193 DA--------AILKGE-----------INFQRDPFPS-------ASSSAIELVHRMLTQD 226
D ++ GE + RD P S S + R+L +D
Sbjct: 207 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 266
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQN 263
P +R AA+++ HP+L ++G + +++ M+QN
Sbjct: 267 PAQRATAAELLKHPFLAKAGPPA------SIVPLMRQN 298
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 69/278 (24%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRK------------LVKDYEKDDVRGEVE-- 85
++G G GI + T S+G A K + RK +++DY+ ++V VE
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV---VEMY 94
Query: 86 -----------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHR 134
VM++L G L D IV +E AAV ++ ++V H +GV+HR
Sbjct: 95 NSYLVGDELWVVMEFLEG--GALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 135 DLKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPYYIAPEVLLQ-KMDQRV 192
D+K ++ L T + +K +DFG +E + +VG+PY++APE++ + V
Sbjct: 152 DIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 193 DA--------AILKGE-----------INFQRDPFPS-------ASSSAIELVHRMLTQD 226
D ++ GE + RD P S S + R+L +D
Sbjct: 209 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 268
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQN 263
P +R AA+++ HP+L ++G + +++ M+QN
Sbjct: 269 PAQRATAAELLKHPFLAKAGPPA------SIVPLMRQN 300
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 69/278 (24%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRK------------LVKDYEKDDVRGEVE-- 85
++G G GI + T S+G A K + RK +++DY+ ++V VE
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV---VEMY 83
Query: 86 -----------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHR 134
VM++L G L D IV +E AAV ++ ++V H +GV+HR
Sbjct: 84 NSYLVGDELWVVMEFLEG--GALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 135 DLKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPYYIAPEVLLQ-KMDQRV 192
D+K ++ L T + +K +DFG +E + +VG+PY++APE++ + V
Sbjct: 141 DIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 193 DA--------AILKGE-----------INFQRDPFPS-------ASSSAIELVHRMLTQD 226
D ++ GE + RD P S S + R+L +D
Sbjct: 198 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD 257
Query: 227 PKRRIIAAQVV-HPWLKESGEASDKPIDTAVIFRMKQN 263
P +R AA+++ HP+L ++G + +++ M+QN
Sbjct: 258 PAQRATAAELLKHPFLAKAGPPA------SIVPLMRQN 289
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 77/175 (44%), Gaps = 29/175 (16%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
+Y + K +G+G F L TG + A K I K +L + R EV +M+ L+
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILN-H 73
Query: 94 PSIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
P+I+ FD +VA G E+ A + R I+ V CH +
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
++HRDLK EN L D + +K DFG S F G G+P Y APE+
Sbjct: 134 RIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELF 185
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 57/260 (21%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRK------------LVKDYEKDDVRGEVE-- 85
++G G GI + TE TG Q A K + RK +++DY D+V
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 86 --------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLK 137
VM++L G L D IV +E A V ++ ++ H +GV+HRD+K
Sbjct: 112 LVGDELWVVMEFLEG--GALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 138 PENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPYYIAPEVLLQ-KMDQRVD-- 193
++ L TS + +K +DFG +E + +VG+PY++APEV+ + VD
Sbjct: 169 SDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIW 225
Query: 194 ------AAILKGEINF-----------QRDPFPS-------ASSSAIELVHRMLTQDPKR 229
++ GE + RD P SS + ML ++P +
Sbjct: 226 SLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQ 285
Query: 230 RIIAAQVV-HPWLKESGEAS 248
R A +++ HP+LK +G S
Sbjct: 286 RATAQELLGHPFLKLAGPPS 305
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 76/175 (43%), Gaps = 29/175 (16%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
+Y + K +G+G F L TG + A K I K +L + R EV + + L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLN-H 72
Query: 94 PSIL------------------------FDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
P+I+ FD +VA G E+ A A R I+ V CH +
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQK 132
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
++HRDLK EN L D + +K DFG S F G G+P Y APE+
Sbjct: 133 FIVHRDLKAENLLL---DADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF 184
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 76/174 (43%), Gaps = 24/174 (13%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE--------- 85
Y + K++G G FG+ L + + A K I + + + + K ++
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRF 79
Query: 86 ------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
VM+Y SG LF+RI G +SE A + ++ V+ CH V H
Sbjct: 80 KEVILTPTHLAIVMEYASG--GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 137
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLK EN L LK DFG S + VG+P YIAPEVLL+K
Sbjct: 138 RDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 190
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 127/312 (40%), Gaps = 91/312 (29%)
Query: 21 DAILGRTYEDVELHYTIGKEL-GRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD 79
D++ G+ +ED+ Y + EL G G + G ++A K I K+ + +
Sbjct: 4 DSLPGK-FEDM---YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQA---GHSRSR 56
Query: 80 VRGEVEVMQYLSGQPSIL---------------FDR---------IVARGHYSERAAAAV 115
V EVE + G +IL F++ I + H++ER A+ V
Sbjct: 57 VFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRV 116
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIV-- 173
+R + ++ H +G+ HRDLKPEN L S ++ + +K DF L + I
Sbjct: 117 VRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTP 176
Query: 174 ------GSPYYIAPEVLLQKMDQ------RVD---------------------------- 193
GS Y+APEV+ DQ R D
Sbjct: 177 ELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGW 236
Query: 194 --------------AAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVV-H 238
+I +G+ F + SS A +L+ ++L +D K+R+ AAQV+ H
Sbjct: 237 DRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQH 296
Query: 239 PWLKESGEASDK 250
PW++ G+A +K
Sbjct: 297 PWVQ--GQAPEK 306
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 77/174 (44%), Gaps = 24/174 (13%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISK-RKLVKDYEKDDVRGE---------- 83
Y + K++G G FG+ L + + A K I + K+ + +++ +
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRF 80
Query: 84 ----------VEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
VM+Y SG LF+RI G +SE A + ++ V+ CH V H
Sbjct: 81 KEVILTPTHLAIVMEYASG--GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLK EN L LK DFG S + VG+P YIAPEVLL+K
Sbjct: 139 RDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 191
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 36/213 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
Y + ++LGRG++ + + + K ++K +K+ ++ E+++++ L G P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVK------ILKPVKKNKIKREIKILENLRGGP 92
Query: 95 SILFDRIVARGHYSERAAAAVLRV-----------------------IMGVVNVCHCRGV 131
+I+ + + S A V I+ ++ CH G+
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLL--QKMD 189
MHRD+KP N + E+ L+ D+GL+ F+ G+ Y V S Y+ PE+L+ Q D
Sbjct: 153 MHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 190 QRVDA---AILKGEINFQRDPFPSASSSAIELV 219
+D + + F+++PF + +LV
Sbjct: 211 YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 100/251 (39%), Gaps = 61/251 (24%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQKM 188
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 154 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 189 DQR----------------------------VDAAILKGEINFQRDPFPSASSSAIELVH 220
+ + A I+K E +F FP A +LV
Sbjct: 211 AXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR----DLVE 266
Query: 221 RMLTQDPKRRI 231
++L D +R+
Sbjct: 267 KLLVLDATKRL 277
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 76/174 (43%), Gaps = 24/174 (13%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE--------- 85
Y + K++G G FG+ L + + A K I + + + + K ++
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRF 80
Query: 86 ------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
VM+Y SG LF+RI G +SE A + ++ V+ CH V H
Sbjct: 81 KEVILTPTHLAIVMEYASG--GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLK EN L LK FG S ++ VG+P YIAPEVLL+K
Sbjct: 139 RDLKLENTLLDG-SPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKK 191
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 29/179 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F T L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQK 187
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 152 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 61/251 (24%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQKM 188
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 154 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 210
Query: 189 DQR----------------------------VDAAILKGEINFQRDPFPSASSSAIELVH 220
+ + I+K E +F FP A +LV
Sbjct: 211 ASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----DLVE 266
Query: 221 RMLTQDPKRRI 231
++L D +R+
Sbjct: 267 KLLVLDATKRL 277
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 57/257 (22%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRK------------LVKDYE--------KDD 79
++G G GI L E +G Q A K + RK +++DY+ K
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 80 VRGE--VEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLK 137
+ GE +M++L G L D IV++ +E A V ++ + H +GV+HRD+K
Sbjct: 112 LVGEELWVLMEFLQG--GALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
Query: 138 PENFLFTSWDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLLQKM-DQRVD-- 193
++ L T + +K +DFG + R+ +VG+PY++APEV+ + + VD
Sbjct: 169 SDSILLTL---DGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIW 225
Query: 194 ------AAILKGEINFQRD------------PFPSASSS------AIELVHRMLTQDPKR 229
++ GE + D P P +S + + RML +DP+
Sbjct: 226 SLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQE 285
Query: 230 RIIAAQVV-HPWLKESG 245
R A +++ HP+L ++G
Sbjct: 286 RATAQELLDHPFLLQTG 302
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG FA K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
+Y D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 107 EYSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG FA K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
+Y D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 107 EYSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG FA K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
+Y D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 107 EYSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 100/251 (39%), Gaps = 61/251 (24%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQKM 188
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 154 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 189 DQR----------------------------VDAAILKGEINFQRDPFPSASSSAIELVH 220
+ + A I+K E +F FP A +LV
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR----DLVE 266
Query: 221 RMLTQDPKRRI 231
++L D +R+
Sbjct: 267 KLLVLDATKRL 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 75/174 (43%), Gaps = 24/174 (13%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE--------- 85
Y + K++G G FG+ L + + A K I + + + + K ++
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRF 80
Query: 86 ------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
VM+Y SG LF+RI G +SE A + ++ V+ CH V H
Sbjct: 81 KEVILTPTHLAIVMEYASG--GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLK EN L LK FG S + VG+P YIAPEVLL+K
Sbjct: 139 RDLKLENTLLDG-SPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 191
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 102/278 (36%), Gaps = 56/278 (20%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISK-RKLVKDYEKDDVRGEVEVM 87
E E Y +G LG+G FG + + LQ A K I + R L D V +EV
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 88 QYL-----SGQPSI-------------------------LFDRIVARGHYSERAAAAVLR 117
G P + LFD I +G E +
Sbjct: 87 LLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFG 146
Query: 118 VIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY 177
++ + CH RGV+HRD+K EN L K DFG + + Y + G+
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDL--RRGCAKLIDFGSGALLHD-EPYTDFDGTRV 203
Query: 178 YIAPEVLLQKMDQRVDAAILK----------GEINFQRDP--------FPS-ASSSAIEL 218
Y PE + + + A + G+I F+RD FP+ S L
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCAL 263
Query: 219 VHRMLTQDPKRRIIAAQV-VHPWLKESGEASDKPIDTA 255
+ R L P R ++ + PW++ E D P++ +
Sbjct: 264 IRRCLAPKPSSRPSLEEILLDPWMQTPAE--DVPLNPS 299
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 36/181 (19%)
Query: 87 MQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSW 146
++Y SG LFDRI E A +M V H G+ HRD+KPEN L
Sbjct: 83 LEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 137
Query: 147 DENALLKATDFGLSVFF---EEGKVYREIVGSPYYIAPEVLLQK--MDQRVD-------- 193
DE LK +DFGL+ F ++ ++ G+ Y+APE+L ++ + VD
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 194 AAILKGEINFQR------------------DPFPSASSSAIELVHRMLTQDPKRRIIAAQ 235
A+L GE+ + + +P+ S+ + L+H++L ++P RI
Sbjct: 198 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPD 257
Query: 236 V 236
+
Sbjct: 258 I 258
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 36/181 (19%)
Query: 87 MQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSW 146
++Y SG LFDRI E A +M V H G+ HRD+KPEN L
Sbjct: 84 LEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 138
Query: 147 DENALLKATDFGLSVFF---EEGKVYREIVGSPYYIAPEVLLQK--MDQRVD-------- 193
DE LK +DFGL+ F ++ ++ G+ Y+APE+L ++ + VD
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 194 AAILKGEINFQR------------------DPFPSASSSAIELVHRMLTQDPKRRIIAAQ 235
A+L GE+ + + +P+ S+ + L+H++L ++P RI
Sbjct: 199 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPD 258
Query: 236 V 236
+
Sbjct: 259 I 259
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE--------- 85
Y + K++G G FG+ L + A K I + + + + K ++
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRF 80
Query: 86 ------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
VM+Y SG LF+RI G +SE A + ++ V+ H V H
Sbjct: 81 KEVILTPTHLAIVMEYASG--GELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAH 138
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLK EN L LK DFG S + VG+P YIAPEVLL+K
Sbjct: 139 RDLKLENTLLDG-SPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKK 191
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 48 CPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 105
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG---K 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 106 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 162
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 163 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 223 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 47 CPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 104
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG---K 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 105 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 161
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 222 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 104
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG---K 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 105 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 161
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 222 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 105
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFF---EEGK 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 106 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 162
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 223 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 105
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFF---EEGK 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 106 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 162
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 223 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 104
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG---K 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 105 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 161
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 222 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 104
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG---K 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 105 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 161
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 222 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 105
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFF---EEGK 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 106 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 162
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 223 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 104
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG---K 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 105 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 161
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 222 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 47 CPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 104
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG---K 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 105 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 161
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 222 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 46 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 103
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG---K 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 104 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 160
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 220
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 221 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 257
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 105
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG---K 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 106 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 162
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 223 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 104
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG---K 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 105 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 161
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 222 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 105
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG---K 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 106 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 162
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 223 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQK 187
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 155 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 104
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG---K 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 105 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 161
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 222 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQK 187
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 155 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 104
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG---K 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 105 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 161
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 222 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 104
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG---K 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 105 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 161
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWK 221
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 222 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQK 187
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 154 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQK 187
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 154 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQK 187
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 154 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 36/181 (19%)
Query: 87 MQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSW 146
++Y SG LFDRI E A +M V H G+ HRD+KPEN L
Sbjct: 84 LEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 138
Query: 147 DENALLKATDFGLSVFFEEG---KVYREIVGSPYYIAPEVLLQK--MDQRVD-------- 193
DE LK +DFGL+ F ++ ++ G+ Y+APE+L ++ + VD
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 194 AAILKGEINFQR------------------DPFPSASSSAIELVHRMLTQDPKRRIIAAQ 235
A+L GE+ + + +P+ S+ + L+H++L ++P RI
Sbjct: 199 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPD 258
Query: 236 V 236
+
Sbjct: 259 I 259
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQK 187
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 152 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQK 187
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 152 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 156
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQK 187
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 157 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQK 187
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 152 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 52 CTENSTGLQFACKSISKRKLVKDY-EKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSER 110
C EN K ++ +VK Y + + + ++Y SG LFDRI E
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG--GELFDRIEPDIGMPEP 104
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG---K 167
A +M V H G+ HRD+KPEN L DE LK +DFGL+ F +
Sbjct: 105 DAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRER 161
Query: 168 VYREIVGSPYYIAPEVLLQK--MDQRVD--------AAILKGEINFQR------------ 205
+ ++ G+ Y+APE+L ++ + VD A+L GE+ + +
Sbjct: 162 LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 206 ------DPFPSASSSAIELVHRMLTQDPKRRIIAAQV 236
+P+ S+ + L+H++L ++P RI +
Sbjct: 222 EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 61/251 (24%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQKM 188
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 151 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 207
Query: 189 ----------------------------DQRVDAAILKGEINFQRDPFPSASSSAIELVH 220
+ + I+K E +F FP A +LV
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----DLVE 263
Query: 221 RMLTQDPKRRI 231
++L D +R+
Sbjct: 264 KLLVLDATKRL 274
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 61/251 (24%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQKM 188
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 151 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS 207
Query: 189 ----------------------------DQRVDAAILKGEINFQRDPFPSASSSAIELVH 220
+ + I+K E +F FP A +LV
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----DLVE 263
Query: 221 RMLTQDPKRRI 231
++L D +R+
Sbjct: 264 KLLVLDATKRL 274
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 61/251 (24%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQKM 188
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 136 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS 192
Query: 189 ----------------------------DQRVDAAILKGEINFQRDPFPSASSSAIELVH 220
+ + I+K E +F FP A +LV
Sbjct: 193 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR----DLVE 248
Query: 221 RMLTQDPKRRI 231
++L D +R+
Sbjct: 249 KLLVLDATKRL 259
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 158
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQK 187
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 159 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQK 187
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 130 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQK 187
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 131 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQK 187
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 132 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--- 91
+ GK LG G F L E +T ++A K + KR ++K+ + V E +VM L
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 92 --------------------GQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ L I G + E I+ + H +G+
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYR--EIVGSPYYIAPEVLLQK 187
+HRDLKPEN L +E+ ++ TDFG + V E K R VG+ Y++PE+L +K
Sbjct: 129 IHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 93
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G +SE A I+ H +++
Sbjct: 94 EFSFKDNSNLYMVMEYVAGGE--MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 151
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L DE ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 152 RDLKPENLLI---DEQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 200
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN + D+ +K TDFGL+ +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLMI---DQQGYIKVTDFGLAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 108 EFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 165
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 166 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 214
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 108 EFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 165
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 166 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 214
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 99
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGE--MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 157
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 158 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 206
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 108 EFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 165
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 166 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 214
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGE--MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 128 EFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 185
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 186 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y G +F + G +SE A I+ H +++
Sbjct: 108 EFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 165
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN + D+ +K TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 166 RDLKPENLMI---DQQGYIKVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 214
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE--------- 85
Y K++G G FG+ L + T A K I + + + + ++
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRF 81
Query: 86 ------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
+M+Y SG L++RI G +SE A + ++ V+ CH + H
Sbjct: 82 KEVILTPTHLAIIMEYASG--GELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICH 139
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLK EN L LK DFG S + VG+P YIAPEVLL++
Sbjct: 140 RDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQ 192
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGE--MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LAGTPEYLAPEIILSK 213
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 127/321 (39%), Gaps = 91/321 (28%)
Query: 21 DAILGRTYEDVELHYTIGKE-LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD 79
D+ GR +EDV Y + ++ LG G C T ++A K I K+ + +
Sbjct: 4 DSFSGR-FEDV---YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSR 56
Query: 80 VRGEVEVMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAV 115
V EVE++ G ++ + I R H++E A+ V
Sbjct: 57 VFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVV 116
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREI--- 172
++ + ++ H +G+ HRDLKPEN L ++ + +K DFGL + I
Sbjct: 117 VQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTP 176
Query: 173 -----VGSPYYIAPEVL------LQKMDQRVD---------------------------- 193
GS Y+APEV+ D+R D
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGW 236
Query: 194 --------------AAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVV-H 238
+I +G+ F + S +A +L+ ++L +D K+R+ AAQV+ H
Sbjct: 237 DRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296
Query: 239 PWLKESGEASDKPIDTAVIFR 259
PW++ G A + + T ++ +
Sbjct: 297 PWVQ--GCAPENTLPTPMVLQ 315
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 124/303 (40%), Gaps = 50/303 (16%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 24 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 83
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 144 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 201
Query: 187 KMD--QRVD---AAILKGEINFQRDPFP--SASSSAIELVHRMLTQDPKRRIIA------ 233
D +D A + E+ + FP S +E++ + T P R I
Sbjct: 202 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT--PTREQIREMNPNY 259
Query: 234 -----AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELREGS 286
Q+ HPW K P A+ R+ + T +L L HS +DELR+ +
Sbjct: 260 TEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 318
Query: 287 AKL 289
KL
Sbjct: 319 VKL 321
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGE--MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LXGTPEYLAPEIILSK 213
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 108 EFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 165
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 166 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 214
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 124/303 (40%), Gaps = 50/303 (16%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 47 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 106
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 167 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 224
Query: 187 KMD--QRVD---AAILKGEINFQRDPFP--SASSSAIELVHRMLTQDPKRRIIA------ 233
D +D A + E+ + FP S +E++ + T P R I
Sbjct: 225 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT--PTREQIREMNPNY 282
Query: 234 -----AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELREGS 286
Q+ HPW K P A+ R+ + T +L L HS +DELR+ +
Sbjct: 283 TEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 341
Query: 287 AKL 289
KL
Sbjct: 342 VKL 344
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G +SE A I+ H +++
Sbjct: 108 EFSFKDNSNLYMVMEYVAGGE--MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 165
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 166 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 214
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 121/308 (39%), Gaps = 60/308 (19%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKD----------------- 74
E+ YT K +G G FG+ Y +G A K + + K K+
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 75 ----YEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNV----- 125
Y + + EV + L P+ ++ VAR + + V+ V + + +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 126 -CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 137 YIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 185 LQKMDQR----------VDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIA- 233
D V A +L G+ F D S +E++ + T P R I
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGD---SGVDQLVEIIKVLGT--PTREQIRE 249
Query: 234 ----------AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDE 281
Q+ HPW K P A+ R+ + T +L L HS +DE
Sbjct: 250 MNPNYTEFAFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
Query: 282 LREGSAKL 289
LR+ + KL
Sbjct: 309 LRDPNVKL 316
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 124/303 (40%), Gaps = 50/303 (16%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 38 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 97
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 158 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 215
Query: 187 KMD--QRVD---AAILKGEINFQRDPFP--SASSSAIELVHRMLTQDPKRRIIA------ 233
D +D A + E+ + FP S +E++ + T P R I
Sbjct: 216 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT--PTREQIREMNPNY 273
Query: 234 -----AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELREGS 286
Q+ HPW K P A+ R+ + T +L L HS +DELR+ +
Sbjct: 274 TEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 332
Query: 287 AKL 289
KL
Sbjct: 333 VKL 335
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGE--MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 165
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 166 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTW-TLCGTPEYLAPEIILSK 214
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGE--MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGE--MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 115/278 (41%), Gaps = 59/278 (21%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGE 83
+G ED + +G LG+G F Y TGL+ A K I K+ + K V+ E
Sbjct: 6 IGEKIED----FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 84 VEVMQYLSGQPSIL-----FDR------IVARGH--------------YSERAAAAVLRV 118
V++ L PSIL F+ ++ H +SE A +
Sbjct: 62 VKIHCQLK-HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ 120
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPY 177
I+ + H G++HRDL N L T N +K DFGL+ + + + + G+P
Sbjct: 121 IITGMLYLHSHGILHRDLTLSNLLLT---RNMNIKIADFGLATQLKMPHEKHYTLCGTPN 177
Query: 178 YIAPEVLLQK---MDQRVDA------AILKGEINFQRDP--------------FPS-ASS 213
YI+PE+ + ++ V + +L G F D PS S
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSI 237
Query: 214 SAIELVHRMLTQDPKRRIIAAQVV-HPWLKESGEASDK 250
A +L+H++L ++P R+ + V+ HP++ + K
Sbjct: 238 EAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSK 275
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 56/306 (18%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 139 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 187 KMDQR----------VDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIA--- 233
D V A +L G+ F D S +E++ + T P R I
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD---SGVDQLVEIIKVLGT--PTREQIREMN 251
Query: 234 --------AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELR 283
Q+ HPW K P A+ R+ + T +L L HS +DELR
Sbjct: 252 PNYTEFAFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Query: 284 EGSAKL 289
+ + KL
Sbjct: 311 DPNVKL 316
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 124/303 (40%), Gaps = 50/303 (16%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 98 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 157
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 218 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 275
Query: 187 KMD--QRVD---AAILKGEINFQRDPFP--SASSSAIELVHRMLTQDPKRRIIA------ 233
D +D A + E+ + FP S +E++ + T P R I
Sbjct: 276 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT--PTREQIREMNPNY 333
Query: 234 -----AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELREGS 286
Q+ HPW K P A+ R+ + T +L L HS +DELR+ +
Sbjct: 334 TEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 392
Query: 287 AKL 289
KL
Sbjct: 393 VKL 395
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 124/303 (40%), Gaps = 50/303 (16%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 27 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 86
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 147 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 204
Query: 187 KMD--QRVD---AAILKGEINFQRDPFP--SASSSAIELVHRMLTQDPKRRIIA------ 233
D +D A + E+ + FP S +E++ + T P R I
Sbjct: 205 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT--PTREQIREMNPNY 262
Query: 234 -----AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELREGS 286
Q+ HPW K P A+ R+ + T +L L HS +DELR+ +
Sbjct: 263 TEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 321
Query: 287 AKL 289
KL
Sbjct: 322 VKL 324
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 124/303 (40%), Gaps = 50/303 (16%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 112
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 173 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 230
Query: 187 KMD--QRVD---AAILKGEINFQRDPFP--SASSSAIELVHRMLTQDPKRRIIA------ 233
D +D A + E+ + FP S +E++ + T P R I
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT--PTREQIREMNPNY 288
Query: 234 -----AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELREGS 286
Q+ HPW K P A+ R+ + T +L L HS +DELR+ +
Sbjct: 289 TEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 347
Query: 287 AKL 289
KL
Sbjct: 348 VKL 350
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 56/306 (18%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 31 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 90
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 151 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208
Query: 187 KMDQR----------VDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIA--- 233
D V A +L G+ F D S +E++ + T P R I
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD---SGVDQLVEIIKVLGT--PTREQIREMN 263
Query: 234 --------AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELR 283
Q+ HPW K P A+ R+ + T +L L HS +DELR
Sbjct: 264 PNYTEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 322
Query: 284 EGSAKL 289
+ + KL
Sbjct: 323 DPNVKL 328
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGE--MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 56/306 (18%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 32 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 91
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 152 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 209
Query: 187 KMDQR----------VDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIA--- 233
D V A +L G+ F D S +E++ + T P R I
Sbjct: 210 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD---SGVDQLVEIIKVLGT--PTREQIREMN 264
Query: 234 --------AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELR 283
Q+ HPW K P A+ R+ + T +L L HS +DELR
Sbjct: 265 PNYTEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 323
Query: 284 EGSAKL 289
+ + KL
Sbjct: 324 DPNVKL 329
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 92
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 93 EFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 150
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 151 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTW-TLCGTPEYLAPEIILSK 199
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 124/303 (40%), Gaps = 50/303 (16%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 57 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 116
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 177 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 234
Query: 187 KMD--QRVD---AAILKGEINFQRDPFP--SASSSAIELVHRMLTQDPKRRIIA------ 233
D +D A + E+ + FP S +E++ + T P R I
Sbjct: 235 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT--PTREQIREMNPNY 292
Query: 234 -----AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELREGS 286
Q+ HPW K P A+ R+ + T +L L HS +DELR+ +
Sbjct: 293 TEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 351
Query: 287 AKL 289
KL
Sbjct: 352 VKL 354
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 124/303 (40%), Gaps = 50/303 (16%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 31 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 90
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 151 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 208
Query: 187 KMD--QRVD---AAILKGEINFQRDPFP--SASSSAIELVHRMLTQDPKRRIIA------ 233
D +D A + E+ + FP S +E++ + T P R I
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT--PTREQIREMNPNY 266
Query: 234 -----AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELREGS 286
Q+ HPW K P A+ R+ + T +L L HS +DELR+ +
Sbjct: 267 TEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 325
Query: 287 AKL 289
KL
Sbjct: 326 VKL 328
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 56/306 (18%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 20 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 79
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 140 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 197
Query: 187 KMDQR----------VDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIA--- 233
D V A +L G+ F D S +E++ + T P R I
Sbjct: 198 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD---SGVDQLVEIIKVLGT--PTREQIREMN 252
Query: 234 --------AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELR 283
Q+ HPW K P A+ R+ + T +L L HS +DELR
Sbjct: 253 PNYTEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 311
Query: 284 EGSAKL 289
+ + KL
Sbjct: 312 DPNVKL 317
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 56/306 (18%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 139 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 187 KMDQR----------VDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIA--- 233
D V A +L G+ F D S +E++ + T P R I
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD---SGVDQLVEIIKVLGT--PTREQIREMN 251
Query: 234 --------AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELR 283
Q+ HPW K P A+ R+ + T +L L HS +DELR
Sbjct: 252 PNYTEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Query: 284 EGSAKL 289
+ + KL
Sbjct: 311 DPNVKL 316
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 37/171 (21%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFF---EE 165
E+ + ++R I ++ H +G+ HRD+KPENFLF++ +++ +K DFGLS F
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFST-NKSFEIKLVDFGLSKEFYKLNN 225
Query: 166 GKVYREIV--GSPYYIAPEVLLQKMDQ---RVDA-------------------------- 194
G+ Y G+PY++APEVL + + DA
Sbjct: 226 GEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTI 285
Query: 195 -AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
+L ++ F+ + S A +L+ +L ++ R A + + HPW+ +
Sbjct: 286 SQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQ 336
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKD--DVRG 82
G + +++ Y + +G+G +G+ + EN T A K ++K K+ + KD ++
Sbjct: 18 GGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT 77
Query: 83 EVEVMQYLSGQPSI 96
EV +M+ L P+I
Sbjct: 78 EVRLMKKLH-HPNI 90
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 56/306 (18%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 23 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 82
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 143 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 200
Query: 187 KMDQR----------VDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIA--- 233
D V A +L G+ F D S +E++ + T P R I
Sbjct: 201 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD---SGVDQLVEIIKVLGT--PTREQIREMN 255
Query: 234 --------AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELR 283
Q+ HPW K P A+ R+ + T +L L HS +DELR
Sbjct: 256 PNYTEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 314
Query: 284 EGSAKL 289
+ + KL
Sbjct: 315 DPNVKL 320
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 56/306 (18%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 139 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 187 KMDQR----------VDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIA--- 233
D V A +L G+ F D S +E++ + T P R I
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD---SGVDQLVEIIKVLGT--PTREQIREMN 251
Query: 234 --------AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELR 283
Q+ HPW K P A+ R+ + T +L L HS +DELR
Sbjct: 252 PNYTEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Query: 284 EGSAKL 289
+ + KL
Sbjct: 311 DPNVKL 316
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 124/303 (40%), Gaps = 50/303 (16%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 112
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 173 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 230
Query: 187 KMD--QRVD---AAILKGEINFQRDPFP--SASSSAIELVHRMLTQDPKRRIIA------ 233
D +D A + E+ + FP S +E++ + T P R I
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT--PTREQIREMNPNY 288
Query: 234 -----AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELREGS 286
Q+ HPW K P A+ R+ + T +L L HS +DELR+ +
Sbjct: 289 TEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 347
Query: 287 AKL 289
KL
Sbjct: 348 VKL 350
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 124/303 (40%), Gaps = 50/303 (16%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 55 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 114
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 175 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 232
Query: 187 KMD--QRVD---AAILKGEINFQRDPFP--SASSSAIELVHRMLTQDPKRRIIA------ 233
D +D A + E+ + FP S +E++ + T P R I
Sbjct: 233 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT--PTREQIREMNPNY 290
Query: 234 -----AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELREGS 286
Q+ HPW K P A+ R+ + T +L L HS +DELR+ +
Sbjct: 291 TEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN 349
Query: 287 AKL 289
KL
Sbjct: 350 VKL 352
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN + D+ ++ TDFGL+ +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLMI---DQQGYIQVTDFGLAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 56/306 (18%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 139 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 187 KMDQR----------VDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIA--- 233
D V A +L G+ F D S +E++ + T P R I
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD---SGVDQLVEIIKVLGT--PTREQIREMN 251
Query: 234 --------AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELR 283
Q+ HPW K P A+ R+ + T +L L HS +DELR
Sbjct: 252 PNYTEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Query: 284 EGSAKL 289
+ + KL
Sbjct: 311 DPNVKL 316
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 56/306 (18%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 139 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 187 KMDQR----------VDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIA--- 233
D V A +L G+ F D S +E++ + T P R I
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD---SGVDQLVEIIKVLGT--PTREQIREMN 251
Query: 234 --------AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELR 283
Q+ HPW K P A+ R+ + T +L L HS +DELR
Sbjct: 252 PNYTEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Query: 284 EGSAKL 289
+ + KL
Sbjct: 311 DPNVKL 316
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y G +F + G +SE A I+ H +++
Sbjct: 108 EFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 165
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN + D+ +K TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 166 RDLKPENLMI---DQQGYIKVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 214
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 56/306 (18%)
Query: 32 ELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG-------EV 84
E+ YT K +G G FG+ Y +G A K + + K K+ E +R +
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRL 78
Query: 85 EVMQYLSGQP------SILFDRI------VARGHYSERAAAAVLRVIMGVVNV------C 126
Y SG+ +++ D + VAR + + V+ V + + +
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G+ HRD+KP+N L + A+LK DFG + G+ + S YY APE++
Sbjct: 139 HSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 187 KMDQR----------VDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIA--- 233
D V A +L G+ F D S +E++ + T P R I
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD---SGVDQLVEIIKVLGT--PTREQIREMN 251
Query: 234 --------AQV-VHPWLKESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHS-YDELR 283
Q+ HPW K P A+ R+ + T +L L HS +DELR
Sbjct: 252 PNYTEFKFPQIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
Query: 284 EGSAKL 289
+ + KL
Sbjct: 311 DPNVKL 316
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y G +F + G +SE A I+ H +++
Sbjct: 108 EFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 165
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN + D+ +K TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 166 RDLKPENLMI---DQQGYIKVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 214
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN + D+ +K TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLMI---DQQGYIKVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G +SE A I+ H +++
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGE--MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 185
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G + + G+P Y+APE++L K
Sbjct: 186 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGATW-TLCGTPEYLAPEIILSK 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 99
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G + E A I+ H +++
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGE--MFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 157
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 158 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 206
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 100/234 (42%), Gaps = 50/234 (21%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE--- 85
ED ELH K LG+G FG +L T FA K++ K ++ D DDV +
Sbjct: 18 EDFELH----KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD---DDVECTMVEKR 70
Query: 86 --------------------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVI 119
VM+YL+G + + + S RA +I
Sbjct: 71 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS-RATFYAAEII 129
Query: 120 MGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSV--FFEEGKVYREIVGSPY 177
+G+ H +G+++RDLK +N L D++ +K DFG+ + K E G+P
Sbjct: 130 LGL-QFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKT-NEFCGTPD 184
Query: 178 YIAPEVLL-QKMDQRVD---AAILKGEINFQRDPFPSASSSAIELVHRMLTQDP 227
YIAPE+LL QK + VD +L E+ + PF EL H + +P
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFHSIRMDNP 236
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K +G G FG L TG +A K + K+K+VK
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYMPG--GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ +K DFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIKVADFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K +G G FG L TG +A K + K+K+VK
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYMPG--GDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ +K DFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIKVADFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G ++E A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 99/250 (39%), Gaps = 69/250 (27%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE------------- 85
K LG+G FG L E +TG +A K + K ++ KD+V V
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---KDEVAHTVTESRVLQNTRHPFL 72
Query: 86 ---------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
VM+Y +G LF + ++E A I+ + H R
Sbjct: 73 TALKYAFQTHDRLCFVMEYANG--GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 130
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYREIVGSPYYIAPEVL----- 184
V++RD+K EN + D++ +K TDFGL +G + G+P Y+APEVL
Sbjct: 131 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 185 -----------------------LQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHR 221
+ +R+ IL EI F R P A S L+
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS----LLAG 243
Query: 222 MLTQDPKRRI 231
+L +DPK+R+
Sbjct: 244 LLKKDPKQRL 253
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K +G G FG L TG +A K + K+K+VK
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ +K DFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIKVADFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN + D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLMI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G + E A I+ H +++
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGE--MFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 185
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 186 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 234
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 99/250 (39%), Gaps = 69/250 (27%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE------------- 85
K LG+G FG L E +TG +A K + K ++ KD+V V
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---KDEVAHTVTESRVLQNTRHPFL 67
Query: 86 ---------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
VM+Y +G LF + ++E A I+ + H R
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGE--LFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYREIVGSPYYIAPEVL----- 184
V++RD+K EN + D++ +K TDFGL +G + G+P Y+APEVL
Sbjct: 126 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 185 -----------------------LQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHR 221
+ +R+ IL EI F R P A S L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS----LLAG 238
Query: 222 MLTQDPKRRI 231
+L +DPK+R+
Sbjct: 239 LLKKDPKQRL 248
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G + E A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G + E A I+ H +++
Sbjct: 108 EFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 165
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 166 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 214
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G + E A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 120/294 (40%), Gaps = 64/294 (21%)
Query: 8 GQDADHPAARQLHDAIL-GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSI 66
G D +++ D ++ RT + Y G+ LG+G F Y T+ T FA K +
Sbjct: 4 GSDPKSAPLKEIPDVLVDPRTMK----RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV 59
Query: 67 SKRKLVKDYEKDDVRGEVEVMQYLSGQPSILF------DRIV-----------------A 103
K L+K ++K+ + E+ + + L + F D V
Sbjct: 60 PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR 119
Query: 104 RGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFF 163
R +E A +R + V H V+HRDLK N LF + D + +K DFGL+
Sbjct: 120 RKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN-LFLNDDMD--VKIGDFGLATKI 176
Query: 164 E-EGKVYREIVGSPYYIAPEVLLQK-----MDQRVDAAIL-------------------- 197
E +G+ +++ G+P YIAPEVL +K +D IL
Sbjct: 177 EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYI 236
Query: 198 ---KGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEAS 248
K E + R P AS+ L+ RML DP R A+++ SG A
Sbjct: 237 RIKKNEYSVPRHINPVASA----LIRRMLHADPTLRPSVAELLTDEFFTSGYAP 286
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G + E A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y+ G +F + G + E A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 99/250 (39%), Gaps = 69/250 (27%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE------------- 85
K LG+G FG L E +TG +A K + K ++ KD+V V
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---KDEVAHTVTESRVLQNTRHPFL 67
Query: 86 ---------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
VM+Y +G LF + ++E A I+ + H R
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGE--LFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYREIVGSPYYIAPEVL----- 184
V++RD+K EN + D++ +K TDFGL +G + G+P Y+APEVL
Sbjct: 126 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 185 -----------------------LQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHR 221
+ +R+ IL EI F R P A S L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS----LLAG 238
Query: 222 MLTQDPKRRI 231
+L +DPK+R+
Sbjct: 239 LLKKDPKQRL 248
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 101
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G + E A I+ H +++
Sbjct: 102 EFSFKDNSNLYMVMEYVAG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 159
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 160 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 208
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 99/250 (39%), Gaps = 69/250 (27%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE------------- 85
K LG+G FG L E +TG +A K + K ++ KD+V V
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---KDEVAHTVTESRVLQNTRHPFL 67
Query: 86 ---------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
VM+Y +G LF + ++E A I+ + H R
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGE--LFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYREIVGSPYYIAPEVL----- 184
V++RD+K EN + D++ +K TDFGL +G + G+P Y+APEVL
Sbjct: 126 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 185 -----------------------LQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHR 221
+ +R+ IL EI F R P A S L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS----LLAG 238
Query: 222 MLTQDPKRRI 231
+L +DPK+R+
Sbjct: 239 LLKKDPKQRL 248
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G + E A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGE--MFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGE--MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN + D+ ++ TDFG + +G+ + + G+P Y+APE+++ K
Sbjct: 165 RDLKPENLII---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIIISK 213
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 99/250 (39%), Gaps = 69/250 (27%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE------------- 85
K LG+G FG L E +TG +A K + K ++ KD+V V
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---KDEVAHTVTESRVLQNTRHPFL 67
Query: 86 ---------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
VM+Y +G LF + ++E A I+ + H R
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGE--LFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYREIVGSPYYIAPEVL----- 184
V++RD+K EN + D++ +K TDFGL +G + G+P Y+APEVL
Sbjct: 126 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 185 -----------------------LQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHR 221
+ +R+ IL EI F R P A S L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS----LLAG 238
Query: 222 MLTQDPKRRI 231
+L +DPK+R+
Sbjct: 239 LLKKDPKQRL 248
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 99/250 (39%), Gaps = 69/250 (27%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE------------- 85
K LG+G FG L E +TG +A K + K ++ KD+V V
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---KDEVAHTVTESRVLQNTRHPFL 67
Query: 86 ---------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
VM+Y +G LF + ++E A I+ + H R
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGE--LFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYREIVGSPYYIAPEVL----- 184
V++RD+K EN + D++ +K TDFGL +G + G+P Y+APEVL
Sbjct: 126 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 185 -----------------------LQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHR 221
+ +R+ IL EI F R P A S L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS----LLAG 238
Query: 222 MLTQDPKRRI 231
+L +DPK+R+
Sbjct: 239 LLKKDPKQRL 248
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 99/250 (39%), Gaps = 69/250 (27%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE------------- 85
K LG+G FG L E +TG +A K + K ++ KD+V V
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---KDEVAHTVTESRVLQNTRHPFL 70
Query: 86 ---------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
VM+Y +G LF + ++E A I+ + H R
Sbjct: 71 TALKYAFQTHDRLCFVMEYANGGE--LFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 128
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYREIVGSPYYIAPEVL----- 184
V++RD+K EN + D++ +K TDFGL +G + G+P Y+APEVL
Sbjct: 129 VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 185
Query: 185 -----------------------LQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHR 221
+ +R+ IL EI F R P A S L+
Sbjct: 186 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS----LLAG 241
Query: 222 MLTQDPKRRI 231
+L +DPK+R+
Sbjct: 242 LLKKDPKQRL 251
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 27/177 (15%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
Y G+ LG+G F Y T+ T FA K + K L+K ++K+ + E+ + + L
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 95 SILF------DRIV-----------------ARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ F D V R +E A +R + V H V
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVLLQK 187
+HRDLK N LF + D + +K DFGL+ E +G+ +++ G+P YIAPEVL +K
Sbjct: 164 IHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKK 217
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y G +F + G + E A I+ H +++
Sbjct: 108 EFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 165
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN + D+ +K TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 166 RDLKPENLMI---DQQGYIKVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 214
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L TG +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y G +F + G + E A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYAPG--GEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN + D+ +K TDFG + +G+ + + G+P Y+APE++L K
Sbjct: 165 RDLKPENLMI---DQQGYIKVTDFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 213
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 101/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 43 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 218
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I++G++ F++
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RV 274
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
SS L+ L P R ++ HPW+++
Sbjct: 275 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGE--MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P Y+AP ++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEYLAPAIILSK 213
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 101/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 191
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I++G++ F++
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RV 247
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
SS L+ L P R ++ HPW+++
Sbjct: 248 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 101/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 35 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 210
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I++G++ F++
Sbjct: 211 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RV 266
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
SS L+ L P R ++ HPW+++
Sbjct: 267 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 101/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 15 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 190
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I++G++ F++
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RV 246
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
SS L+ L P R ++ HPW+++
Sbjct: 247 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 118/298 (39%), Gaps = 86/298 (28%)
Query: 25 GRTYEDVELH-YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV----------- 72
G + + V+L+ YT+ E+G+G +G+ L + +A K +SK+KL+
Sbjct: 4 GSSGDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPP 63
Query: 73 ---------------------------KDYEKDDVRGEVEVMQYLSGQPSILFDRIVARG 105
K + +V VEV+ + + +V +G
Sbjct: 64 RGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQG 123
Query: 106 H---------YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATD 156
SE A + ++ + H + ++HRD+KP N L E+ +K D
Sbjct: 124 PVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIAD 180
Query: 157 FGLSVFFE-EGKVYREIVGSPYYIAPEVLLQK---------------------------- 187
FG+S F+ + VG+P ++APE L +
Sbjct: 181 FGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
Query: 188 MDQRVDAAILKGEINFQRDPFPSASSSA---IELVHRMLTQDPKRRIIAAQV-VHPWL 241
MD+R+ L +I Q FP A +L+ RML ++P+ RI+ ++ +HPW+
Sbjct: 241 MDERI--MCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
++ ++ CH +G+MHRD+KP N + E L+ D+GL+ F+ GK Y V S Y+
Sbjct: 155 LLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 212
Query: 179 IAPEVL--LQKMDQRVD----AAILKGEINFQRDPFPSASSSAIELV 219
PE+L LQ D +D + G I F+++PF + +LV
Sbjct: 213 KGPELLVDLQDYDYSLDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLV 258
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 103/268 (38%), Gaps = 70/268 (26%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVK----DYEKD------------ 78
+ I + LG G FG +L G +A K + K +V+ ++ D
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 79 ---------DVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
D + +M Y+ G LF + + A + + H +
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEG--GELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 125
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK-M 188
+++RDLKPEN L D+N +K TDFG + + + V + G+P YIAPEV+ K
Sbjct: 126 DIIYRDLKPENILL---DKNGHIKITDFGFAKYVPD--VTYXLCGTPDYIAPEVVSTKPY 180
Query: 189 DQRVD---------------------------AAILKGEINFQRDPFPSASSSAIELVHR 221
++ +D IL E+ F P + +L+ R
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSR 236
Query: 222 MLTQDPKRRIIAAQ------VVHPWLKE 243
++T+D +R+ Q HPW KE
Sbjct: 237 LITRDLSQRLGNLQNGTEDVKNHPWFKE 264
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 126/321 (39%), Gaps = 91/321 (28%)
Query: 21 DAILGRTYEDVELHYTIGKE-LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD 79
D+ GR +EDV Y + ++ LG G C T ++A K I K+ + +
Sbjct: 4 DSFSGR-FEDV---YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSR 56
Query: 80 VRGEVEVMQYLSGQPSI------------------------LFDRIVARGHYSERAAAAV 115
V EVE++ G ++ + I R H++E A+ V
Sbjct: 57 VFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVV 116
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREI--- 172
++ + ++ H +G+ HRDLKPEN L ++ + +K DF L + I
Sbjct: 117 VQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP 176
Query: 173 -----VGSPYYIAPEVL------LQKMDQRVD---------------------------- 193
GS Y+APEV+ D+R D
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGW 236
Query: 194 --------------AAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVV-H 238
+I +G+ F + S +A +L+ ++L +D K+R+ AAQV+ H
Sbjct: 237 DRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296
Query: 239 PWLKESGEASDKPIDTAVIFR 259
PW++ G A + + T ++ +
Sbjct: 297 PWVQ--GCAPENTLPTPMVLQ 315
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
++ ++ CH +G+MHRD+KP N + E L+ D+GL+ F+ GK Y V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 179 IAPEVL--LQKMDQRVD----AAILKGEINFQRDPFPSASSSAIELV 219
PE+L LQ D +D + G I F+++PF + +LV
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLV 237
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
++ ++ CH +G+MHRD+KP N + E L+ D+GL+ F+ GK Y V S Y+
Sbjct: 136 LLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 193
Query: 179 IAPEVL--LQKMDQRVD----AAILKGEINFQRDPFPSASSSAIELV 219
PE+L LQ D +D + G I F+++PF + +LV
Sbjct: 194 KGPELLVDLQDYDYSLDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLV 239
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 101/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 203
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I++G++ F++
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RV 259
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
SS L+ L P R ++ HPW+++
Sbjct: 260 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
++ ++ CH +G+MHRD+KP N + E L+ D+GL+ F+ GK Y V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 179 IAPEVL--LQKMDQRVD----AAILKGEINFQRDPFPSASSSAIELV 219
PE+L LQ D +D + G I F+++PF + +LV
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLV 237
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
++ ++ CH +G+MHRD+KP N + E L+ D+GL+ F+ GK Y V S Y+
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 192
Query: 179 IAPEVL--LQKMDQRVD----AAILKGEINFQRDPFPSASSSAIELV 219
PE+L LQ D +D + G I F+++PF + +LV
Sbjct: 193 KGPELLVDLQDYDYSLDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLV 238
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ CH G+MHRD+KP N L E+ L+ D+GL+ F+ G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVLIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+++PF + +LV
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
++ ++ CH +G+MHRD+KP N + E L+ D+GL+ F+ GK Y V S Y+
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 192
Query: 179 IAPEVL--LQKMDQRVD----AAILKGEINFQRDPFPSASSSAIELV 219
PE+L LQ D +D + G I F+++PF + +LV
Sbjct: 193 KGPELLVDLQDYDYSLDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLV 238
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
++ ++ CH +G+MHRD+KP N + E L+ D+GL+ F+ GK Y V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 179 IAPEVL--LQKMDQRVD----AAILKGEINFQRDPFPSASSSAIELV 219
PE+L LQ D +D + G I F+++PF + +LV
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLV 237
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
++ ++ CH +G+MHRD+KP N + E L+ D+GL+ F+ GK Y V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 179 IAPEVL--LQKMDQRVD----AAILKGEINFQRDPFPSASSSAIELV 219
PE+L LQ D +D + G I F+++PF + +LV
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLV 237
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
++ ++ CH +G+MHRD+KP N + E L+ D+GL+ F+ GK Y V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 179 IAPEVL--LQKMDQRVD----AAILKGEINFQRDPFPSASSSAIELV 219
PE+L LQ D +D + G I F+++PF + +LV
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLV 237
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
++ ++ CH +G+MHRD+KP N + E L+ D+GL+ F+ GK Y V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 179 IAPEVL--LQKMDQRVD----AAILKGEINFQRDPFPSASSSAIELV 219
PE+L LQ D +D + G I F+++PF + +LV
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMI-FRKEPFFYGHDNHDQLV 237
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 27/177 (15%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
Y G+ LG+G F Y T+ T FA K + K L+K ++K+ + E+ + + L
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 95 SILF------DRIV-----------------ARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ F D V R +E A +R + V H V
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVLLQK 187
+HRDLK N LF + D + +K DFGL+ E +G+ + + G+P YIAPEVL +K
Sbjct: 164 IHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKK 217
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 27/177 (15%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
Y G+ LG+G F Y T+ T FA K + K L+K ++K+ + E+ + + L
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 95 SILF------DRIV-----------------ARGHYSERAAAAVLRVIMGVVNVCHCRGV 131
+ F D V R +E A +R + V H V
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVLLQK 187
+HRDLK N LF + D + +K DFGL+ E +G+ + + G+P YIAPEVL +K
Sbjct: 164 IHRDLKLGN-LFLNDDMD--VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKK 217
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
+ LG G FG L TG +A K + K+K+VK
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKL 107
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D V++Y G +F + G +SE A I+ H +++
Sbjct: 108 EFSFKDNSNLYMVLEYAPG--GEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 165
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ +K DFG + +G+ + + G+P Y+APE++L K
Sbjct: 166 RDLKPENLLI---DQQGYIKVADFGFAKRV-KGRTWX-LCGTPEYLAPEIILSK 214
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 113/285 (39%), Gaps = 70/285 (24%)
Query: 5 FSKGQDADHPAARQLHDAILGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACK 64
F G +D+ A ++ ++ + + K LG+G FG L E +TG +A K
Sbjct: 120 FRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMK 179
Query: 65 SISKRKLVKDYEKDDVRGEVE----------------------------VMQYLSGQPSI 96
+ K +V KD+V + VM+Y +G
Sbjct: 180 ILKKEVIVA---KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG--GE 234
Query: 97 LFDRIVARGHYSERAAAAVLRVIMGVVNVCHC-RGVMHRDLKPENFLFTSWDENALLKAT 155
LF + +SE A I+ ++ H + V++RDLK EN + D++ +K T
Sbjct: 235 LFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKIT 291
Query: 156 DFGL-SVFFEEGKVYREIVGSPYYIAPEVL----------------------------LQ 186
DFGL ++G + G+P Y+APEVL
Sbjct: 292 DFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 351
Query: 187 KMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRI 231
+ +++ IL EI F R P A S L+ +L +DPK+R+
Sbjct: 352 QDHEKLFELILMEEIRFPRTLGPEAKS----LLSGLLKKDPKQRL 392
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 113/285 (39%), Gaps = 70/285 (24%)
Query: 5 FSKGQDADHPAARQLHDAILGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACK 64
F G +D+ A ++ ++ + + K LG+G FG L E +TG +A K
Sbjct: 123 FRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMK 182
Query: 65 SISKRKLVKDYEKDDVRGEVE----------------------------VMQYLSGQPSI 96
+ K +V KD+V + VM+Y +G
Sbjct: 183 ILKKEVIVA---KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG--GE 237
Query: 97 LFDRIVARGHYSERAAAAVLRVIMGVVNVCHC-RGVMHRDLKPENFLFTSWDENALLKAT 155
LF + +SE A I+ ++ H + V++RDLK EN + D++ +K T
Sbjct: 238 LFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKIT 294
Query: 156 DFGL-SVFFEEGKVYREIVGSPYYIAPEVL----------------------------LQ 186
DFGL ++G + G+P Y+APEVL
Sbjct: 295 DFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 354
Query: 187 KMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRI 231
+ +++ IL EI F R P A S L+ +L +DPK+R+
Sbjct: 355 QDHEKLFELILMEEIRFPRTLGPEAKS----LLSGLLKKDPKQRL 395
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ CH G+MHRD+KP N + E+ L+ D+GL+ F+ G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+++PF + +LV
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------------------------- 73
K LG G FG L +G +A K + K+K+VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 74 DYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
++ D VM+Y++G +F + G +SE A I+ H +++
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGE--MFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIY 164
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
RDLKPEN L D+ ++ TDFG + +G+ + + G+P +APE++L K
Sbjct: 165 RDLKPENLLI---DQQGYIQVTDFGFAKRV-KGRTWX-LCGTPEALAPEIILSK 213
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ CH G+MHRD+KP N + E+ L+ D+GL+ F+ G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+++PF + +LV
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ CH G+MHRD+KP N + E+ L+ D+GL+ F+ G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+++PF + +LV
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ CH G+MHRD+KP N + E+ L+ D+GL+ F+ G+ Y V S Y+
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 196
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+++PF + +LV
Sbjct: 197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ CH G+MHRD+KP N + E+ L+ D+GL+ F+ G+ Y V S Y+
Sbjct: 138 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 195
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+++PF + +LV
Sbjct: 196 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 241
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ CH G+MHRD+KP N + E+ L+ D+GL+ F+ G+ Y V S Y+
Sbjct: 145 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 202
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+++PF + +LV
Sbjct: 203 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 248
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ CH G+MHRD+KP N + E+ L+ D+GL+ F+ G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+++PF + +LV
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ CH G+MHRD+KP N + E+ L+ D+GL+ F+ G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+++PF + +LV
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ CH G+MHRD+KP N + E+ L+ D+GL+ F+ G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+++PF + +LV
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ CH G+MHRD+KP N + E+ L+ D+GL+ F+ G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+++PF + +LV
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ CH G+MHRD+KP N + E+ L+ D+GL+ F+ G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+++PF + +LV
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ CH G+MHRD+KP N + E+ L+ D+GL+ F+ G+ Y V S Y+
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 196
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+++PF + +LV
Sbjct: 197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 100/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 203
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I+ G++ F++
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----RV 259
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
SS L+ L P R ++ HPW+++
Sbjct: 260 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 100/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 204
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I+ G++ F++
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----RV 260
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
SS L+ L P R ++ HPW+++
Sbjct: 261 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 44/213 (20%)
Query: 10 DADHPAARQLH--DAILGRTYEDVEL---------HYTIGKELGRGEFGITYLCTENSTG 58
D D PA R+ D L R + + Y + K +GRG FG L ST
Sbjct: 35 DLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR 94
Query: 59 LQFACKSISKRKLVKD-------------------------YEKDDVRGEVEVMQYLSGQ 93
+A K +SK +++K Y D R VM+Y+ G
Sbjct: 95 KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 154
Query: 94 PSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLK 153
+ +++ E+ A ++ ++ H G +HRD+KP+N L D++ LK
Sbjct: 155 DLV---NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLK 208
Query: 154 ATDFGLSV-FFEEGKVYREI-VGSPYYIAPEVL 184
DFG + +EG V + VG+P YI+PEVL
Sbjct: 209 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL 241
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ CH G+MHRD+KP N + E+ L+ D+GL+ F+ G+ Y V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+++PF + +LV
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 100/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 204
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I+ G++ F++
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----RV 260
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
SS L+ L P R ++ HPW+++
Sbjct: 261 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 44/213 (20%)
Query: 10 DADHPAARQLH--DAILGRTYEDVEL---------HYTIGKELGRGEFGITYLCTENSTG 58
D D PA R+ D L R + + Y + K +GRG FG L ST
Sbjct: 40 DLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR 99
Query: 59 LQFACKSISKRKLVKD-------------------------YEKDDVRGEVEVMQYLSGQ 93
+A K +SK +++K Y D R VM+Y+ G
Sbjct: 100 KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 159
Query: 94 PSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLK 153
+ +++ E+ A ++ ++ H G +HRD+KP+N L D++ LK
Sbjct: 160 DLV---NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLK 213
Query: 154 ATDFGLSV-FFEEGKVYREI-VGSPYYIAPEVL 184
DFG + +EG V + VG+P YI+PEVL
Sbjct: 214 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL 246
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 100/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 203
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I+ G++ F++
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----RV 259
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
SS L+ L P R ++ HPW+++
Sbjct: 260 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 44/213 (20%)
Query: 10 DADHPAARQLH--DAILGRTYEDVEL---------HYTIGKELGRGEFGITYLCTENSTG 58
D D PA R+ D L R + + Y + K +GRG FG L ST
Sbjct: 40 DLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR 99
Query: 59 LQFACKSISKRKLVKD-------------------------YEKDDVRGEVEVMQYLSGQ 93
+A K +SK +++K Y D R VM+Y+ G
Sbjct: 100 KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 159
Query: 94 PSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLK 153
+ +++ E+ A ++ ++ H G +HRD+KP+N L D++ LK
Sbjct: 160 DLV---NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLK 213
Query: 154 ATDFGLSV-FFEEGKVYREI-VGSPYYIAPEVL 184
DFG + +EG V + VG+P YI+PEVL
Sbjct: 214 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL 246
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 29 EDVEL-HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVM 87
EDV H+ I + +G+G FG + +N T +A K ++K+K V+ E +V E+++M
Sbjct: 10 EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIM 69
Query: 88 Q----------YLSGQPS----ILFDRIVA---------RGHYSERAAAAVLRVIMGVVN 124
Q + S Q ++ D ++ H+ E + ++ ++
Sbjct: 70 QGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD 129
Query: 125 VCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
+ ++HRD+KP+N L DE+ + TDF ++ + G+ Y+APE+
Sbjct: 130 YLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMF 186
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 100/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 48 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 107
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 108 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 167
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 223
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I++G++ F++
Sbjct: 224 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RV 279
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
S L+ L P R ++ HPW+++
Sbjct: 280 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 312
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 100/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 191
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I++G++ F++
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RV 247
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
S L+ L P R ++ HPW+++
Sbjct: 248 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 100/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 15 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 190
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I++G++ F++
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RV 246
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
S L+ L P R ++ HPW+++
Sbjct: 247 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 33/177 (18%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKD------YEKDDVRGEVE--- 85
Y + K +GRG FG L ++ +A K +SK +++K +E+ D+
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 86 ----------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
VM+Y+ G + +++ E+ A ++ ++ H
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLV---NLMSNYDVPEKWAKFYTAEVVLALDAIHSM 193
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE-GKVYREI-VGSPYYIAPEVL 184
G++HRD+KP+N L D++ LK DFG + +E G V+ + VG+P YI+PEVL
Sbjct: 194 GLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVL 247
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 100/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 191
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I++G++ F++
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RV 247
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
S L+ L P R ++ HPW+++
Sbjct: 248 SXECQHLIRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 63/258 (24%)
Query: 34 HYTIGKELGRGEFGITYLCTENS---TGLQFACKSISKRKLV-KDYEKDDVRGEVEVMQY 89
++ + K LG G +G +L + S TG +A K + K +V K + R E +V+++
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 90 LSGQPSI------------------------LFDRIVARGHYSERAAAAVLRVIMGVVNV 125
+ P + LF + R ++E + I+ +
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEH 174
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYR--EIVGSPYYIAPE- 182
H G+++RD+K EN L D N + TDFGLS F + R + G+ Y+AP+
Sbjct: 175 LHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 231
Query: 183 ------------------VLLQKMDQRVDAAILKGEINFQRD----------PFPSASSS 214
VL+ ++ + GE N Q + P+P S+
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSA 291
Query: 215 -AIELVHRMLTQDPKRRI 231
A +L+ R+L +DPK+R+
Sbjct: 292 LAKDLIQRLLMKDPKKRL 309
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 100/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 43 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 218
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I++G++ F++
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RV 274
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
S L+ L P R ++ HPW+++
Sbjct: 275 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 99/269 (36%), Gaps = 62/269 (23%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD--------- 79
E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 80 --------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAVLRVI 119
G + ++ + S LFD I RG E A + +
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 120 MGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVGSPYY 178
+ V CH GV+HRD+K EN L D N LK DFG ++ VY + G+ Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVY 180
Query: 179 IAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSASSSA 215
PE +LL M D I++G++ F++ SS
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RVSSEC 236
Query: 216 IELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
L+ L P R ++ HPW+++
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 86 VMQYLSGQPSI-LFDRIVARGHYS-----ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPE 139
VM+ LSG + + IVA+G + E A +LR ++ + H G +HRD+K
Sbjct: 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAG 150
Query: 140 NFLFTSWDENALLKATDFGLSVFFEEG------KVYREIVGSPYYIAPEVLLQ 186
N L E+ ++ DFG+S F G KV + VG+P ++APEV+ Q
Sbjct: 151 NILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ 200
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 86 VMQYLSGQPSI-LFDRIVARGHYS-----ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPE 139
VM+ LSG + + IVA+G + E A +LR ++ + H G +HRD+K
Sbjct: 86 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAG 145
Query: 140 NFLFTSWDENALLKATDFGLSVFFEEG------KVYREIVGSPYYIAPEVLLQ 186
N L E+ ++ DFG+S F G KV + VG+P ++APEV+ Q
Sbjct: 146 NILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ 195
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 105/264 (39%), Gaps = 52/264 (19%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKD-YEKDDVRGEV--------- 84
Y+ LG G FG + + + K I K K+++D + +D G+V
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 85 ----EVMQYLSGQPSILFDRIVARGHYS---------------ERAAAAVLRVIMGVVNV 125
+++ L + F ++V H S E A+ + R ++ V
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGY 145
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLL 185
+ ++HRD+K EN + E+ +K DFG + + E GK++ G+ Y APEVL+
Sbjct: 146 LRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLM 202
Query: 186 QKMDQRVDAAILKGEIN-----FQRDPFPS--------------ASSSAIELVHRMLTQD 226
+ + + + F+ +PF S + LV +L
Sbjct: 203 GNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSLVSGLLQPV 262
Query: 227 PKRRIIAAQVV-HPWLKESGEASD 249
P+RR ++V PW+ + +D
Sbjct: 263 PERRTTLEKLVTDPWVTQPVNLAD 286
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 29/181 (16%)
Query: 30 DVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSIS-----KRKLV-------KDYEK 77
D + YT +++G+G G Y + +TG + A + ++ K++L+ ++ +
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 76
Query: 78 DDVRGEVE----------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCH 127
++ ++ VM+YL+G +V E AAV R + + H
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGS---LTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 128 CRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYR-EIVGSPYYIAPEVLLQ 186
V+HRD+K +N L + +K TDFG + R E+VG+PY++APEV+ +
Sbjct: 134 SNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTR 190
Query: 187 K 187
K
Sbjct: 191 K 191
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 97/268 (36%), Gaps = 60/268 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD--------- 79
E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 80 --------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAVLRVI 119
G + ++ + S LFD I RG E A + +
Sbjct: 64 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 123
Query: 120 MGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYI 179
+ V CH GV+HRD+K EN L LK DFG ++ VY + G+ Y
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKD-TVYTDFDGTRVYS 180
Query: 180 APE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSASSSAI 216
PE +LL M D I++G++ F++ SS
Sbjct: 181 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RVSSECQ 236
Query: 217 ELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
L+ L P R ++ HPW+++
Sbjct: 237 HLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 99/269 (36%), Gaps = 62/269 (23%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD--------- 79
E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 80 --------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAVLRVI 119
G + ++ + S LFD I RG E A + +
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 120 MGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVGSPYY 178
+ V CH GV+HRD+K EN L D N LK DFG ++ VY + G+ Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRVY 180
Query: 179 IAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSASSSA 215
PE +LL M D I++G++ F++ SS
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RVSSEC 236
Query: 216 IELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
L+ L P R ++ HPW+++
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 97/268 (36%), Gaps = 60/268 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD--------- 79
E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 80 --------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAVLRVI 119
G + ++ + S LFD I RG E A + +
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 120 MGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYI 179
+ V CH GV+HRD+K EN L LK DFG ++ VY + G+ Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKD-TVYTDFDGTRVYS 181
Query: 180 APE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSASSSAI 216
PE +LL M D I++G++ F++ SS
Sbjct: 182 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RVSSECQ 237
Query: 217 ELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
L+ L P R ++ HPW+++
Sbjct: 238 HLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 97/268 (36%), Gaps = 60/268 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD--------- 79
E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 80 --------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAVLRVI 119
G + ++ + S LFD I RG E A + +
Sbjct: 64 LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV 123
Query: 120 MGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYI 179
+ V CH GV+HRD+K EN L LK DFG ++ VY + G+ Y
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKD-TVYTDFDGTRVYS 180
Query: 180 APE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSASSSAI 216
PE +LL M D I++G++ F++ SS
Sbjct: 181 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RVSSECQ 236
Query: 217 ELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
L+ L P R ++ HPW+++
Sbjct: 237 HLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 97/268 (36%), Gaps = 60/268 (22%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD--------- 79
E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 80 --------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAVLRVI 119
G + ++ + S LFD I RG E A + +
Sbjct: 63 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 122
Query: 120 MGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYI 179
+ V CH GV+HRD+K EN L LK DFG ++ VY + G+ Y
Sbjct: 123 LEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKD-TVYTDFDGTRVYS 179
Query: 180 APE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSASSSAI 216
PE +LL M D I++G++ F++ SS
Sbjct: 180 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RVSSECQ 235
Query: 217 ELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
L+ L P R ++ HPW+++
Sbjct: 236 HLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 126/342 (36%), Gaps = 77/342 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEV 84
GR V Y + K+LG+G +GI + + TG A K I + E+
Sbjct: 1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD-AFQNSTDAQRTFREI 59
Query: 85 EVMQYLSGQPSILFDRIVARGH----------YSERAAAAVLRV--------------IM 120
++ LSG +I+ V R Y E AV+R ++
Sbjct: 60 MILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLI 119
Query: 121 GVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFF----------------- 163
V+ H G++HRD+KP N L + +K DFGLS F
Sbjct: 120 KVIKYLHSGGLLHRDMKPSNILLNA---ECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 164 -----EEGKVYREIVGSPYYIAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASS 213
++ + + V + +Y APE+LL K + +D + GEI + FP +S
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS- 235
Query: 214 SAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQNTAM------- 266
T + RII V+ E E+ P +I +K+ +
Sbjct: 236 ----------TMNQLERIIG--VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRD 283
Query: 267 --NKLKKLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAAD 306
K K L LK + + E + L L FN + + A D
Sbjct: 284 IFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISAND 325
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
++ ++ CH +G+MHRD+KP N + + L+ D+GL+ F+ + Y V S Y+
Sbjct: 141 LLKALDYCHSKGIMHRDVKPHNVMIDH--QQKKLRLIDWGLAEFYHPAQEYNVRVASRYF 198
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+R+PF + +LV
Sbjct: 199 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLV 244
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
++ ++ CH +G+MHRD+KP N + + L+ D+GL+ F+ + Y V S Y+
Sbjct: 146 LLKALDYCHSKGIMHRDVKPHNVMIDH--QQKKLRLIDWGLAEFYHPAQEYNVRVASRYF 203
Query: 179 IAPEVLL--QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
PE+L+ Q D +D + + F+R+PF + +LV
Sbjct: 204 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLV 249
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 99/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 204
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I+ G++ F++
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----RV 260
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
S L+ L P R ++ HPW+++
Sbjct: 261 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 99/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 204
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I+ G++ F++
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----RV 260
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
S L+ L P R ++ HPW+++
Sbjct: 261 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 99/273 (36%), Gaps = 62/273 (22%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----- 79
G+ E +E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 80 ------------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAV 115
G + ++ + S LFD I RG E A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVG 174
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDG 203
Query: 175 SPYYIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSA 211
+ Y PE +LL M D I+ G++ F++
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----RV 259
Query: 212 SSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
S L+ L P R ++ HPW+++
Sbjct: 260 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 115/323 (35%), Gaps = 104/323 (32%)
Query: 26 RTYEDVELHYTIGKELGRGEFGITYLCTENSTG-------------LQFACKSISKRKLV 72
R ++ + + LG G +G+ T TG FA +++ + K++
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKIL 63
Query: 73 KDYEKDDV--------------RGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRV 118
K ++ +++ EV ++Q L R+++ S+ +
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD---LHRVISTQMLSDDHIQYFIYQ 120
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV---------- 168
+ V V H V+HRDLKP N L S N LK DFGL+ +E
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 169 -YREIVGSPYYIAPEVLL------QKMDQRVDAAILKGEINFQRDPFPS----------- 210
E V + +Y APEV+L + MD IL E+ +R FP
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL-AELFLRRPIFPGRDYRHQLLLIF 236
Query: 211 -----------------------------------------ASSSAIELVHRMLTQDPKR 229
+ I+L+ RML DP +
Sbjct: 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296
Query: 230 RIIAAQVV-HPWLKESGEASDKP 251
RI A + + HP+L+ + +D+P
Sbjct: 297 RITAKEALEHPYLQTYHDPNDEP 319
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 115/323 (35%), Gaps = 104/323 (32%)
Query: 26 RTYEDVELHYTIGKELGRGEFGITYLCTENSTG-------------LQFACKSISKRKLV 72
R ++ + + LG G +G+ T TG FA +++ + K++
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKIL 63
Query: 73 KDYEKDDV--------------RGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRV 118
K ++ +++ EV ++Q L R+++ S+ +
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD---LHRVISTQMLSDDHIQYFIYQ 120
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV---------- 168
+ V V H V+HRDLKP N L S N LK DFGL+ +E
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 169 -YREIVGSPYYIAPEVLL------QKMDQRVDAAILKGEINFQRDPFPS----------- 210
E V + +Y APEV+L + MD IL E+ +R FP
Sbjct: 178 GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL-AELFLRRPIFPGRDYRHQLLLIF 236
Query: 211 -----------------------------------------ASSSAIELVHRMLTQDPKR 229
+ I+L+ RML DP +
Sbjct: 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296
Query: 230 RIIAAQVV-HPWLKESGEASDKP 251
RI A + + HP+L+ + +D+P
Sbjct: 297 RITAKEALEHPYLQTYHDPNDEP 319
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 115/323 (35%), Gaps = 104/323 (32%)
Query: 26 RTYEDVELHYTIGKELGRGEFGITYLCTENSTG-------------LQFACKSISKRKLV 72
R ++ + + LG G +G+ T TG FA +++ + K++
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKIL 63
Query: 73 KDYEKDDV--------------RGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRV 118
K ++ +++ EV ++Q L R+++ S+ +
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD---LHRVISTQMLSDDHIQYFIYQ 120
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV---------- 168
+ V V H V+HRDLKP N L S N LK DFGL+ +E
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 169 -YREIVGSPYYIAPEVLL------QKMDQRVDAAILKGEINFQRDPFPS----------- 210
E V + +Y APEV+L + MD IL E+ +R FP
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL-AELFLRRPIFPGRDYRHQLLLIF 236
Query: 211 -----------------------------------------ASSSAIELVHRMLTQDPKR 229
+ I+L+ RML DP +
Sbjct: 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296
Query: 230 RIIAAQVV-HPWLKESGEASDKP 251
RI A + + HP+L+ + +D+P
Sbjct: 297 RITAKEALEHPYLQTYHDPNDEP 319
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 101/251 (40%), Gaps = 70/251 (27%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE------------- 85
K LG+G FG L E +TG +A K + K +V KD+V +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA---KDEVAHTLTENRVLQNSRHPFL 71
Query: 86 ---------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHC-R 129
VM+Y +G LF + +SE A I+ ++ H +
Sbjct: 72 TALKYSFQTHDRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 129
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYREIVGSPYYIAPEVL---- 184
V++RDLK EN + D++ +K TDFGL ++G + G+P Y+APEVL
Sbjct: 130 NVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 186
Query: 185 ------------------------LQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVH 220
+ +++ IL EI F R P A S L+
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKS----LLS 242
Query: 221 RMLTQDPKRRI 231
+L +DPK+R+
Sbjct: 243 GLLKKDPKQRL 253
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 96/228 (42%), Gaps = 46/228 (20%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE--------- 85
+ + K LG+G FG +L T FA K++ K ++ D DDV +
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD---DDVECTMVEKRVLSLAW 75
Query: 86 --------------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNV 125
VM+YL+G + + + S RA +I+G+
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS-RATFYAAEIILGL-QF 133
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSV--FFEEGKVYREIVGSPYYIAPEV 183
H +G+++RDLK +N L D++ +K DFG+ + K G+P YIAPE+
Sbjct: 134 LHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKT-NXFCGTPDYIAPEI 189
Query: 184 LL-QKMDQRVD---AAILKGEINFQRDPFPSASSSAIELVHRMLTQDP 227
LL QK + VD +L E+ + PF EL H + +P
Sbjct: 190 LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFHSIRMDNP 235
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 35/180 (19%)
Query: 34 HYTIGKELGRGEFGITYLC---TENSTGLQFACKSISK-----RKLVKDYEKDDVRGEVE 85
H+ + K LG+G FG +L T +G +A K + K R V+ + D+ +V
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 86 -------------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVC 126
++ +L G LF R+ ++E L + ++
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAELALGLDHL 146
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLS--VFFEEGKVYREIVGSPYYIAPEVL 184
H G+++RDLKPEN L DE +K TDFGLS E K Y G+ Y+APEV+
Sbjct: 147 HSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKEAIDHEKKAY-SFCGTVEYMAPEVV 202
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 96/266 (36%), Gaps = 60/266 (22%)
Query: 31 VELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----------- 79
+E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 80 ------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAVLRVIMG 121
G + ++ + S LFD I RG E A + ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAP 181
V CH GV+HRD+K EN L LK DFG ++ VY + G+ Y P
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPP 178
Query: 182 E------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSASSSAIEL 218
E +LL M D I++G++ F++ SS L
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RVSSECQHL 234
Query: 219 VHRMLTQDPKRRIIAAQVV-HPWLKE 243
+ L P R ++ HPW+++
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 101/251 (40%), Gaps = 70/251 (27%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE------------- 85
K LG+G FG L E +TG +A K + K +V KD+V +
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA---KDEVAHTLTENRVLQNSRHPFL 70
Query: 86 ---------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHC-R 129
VM+Y +G LF + +SE A I+ ++ H +
Sbjct: 71 TALKYSFQTHDRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 128
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYREIVGSPYYIAPEVL---- 184
V++RDLK EN + D++ +K TDFGL ++G + G+P Y+APEVL
Sbjct: 129 NVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 185
Query: 185 ------------------------LQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVH 220
+ +++ IL EI F R P A S L+
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKS----LLS 241
Query: 221 RMLTQDPKRRI 231
+L +DPK+R+
Sbjct: 242 GLLKKDPKQRL 252
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 99/270 (36%), Gaps = 64/270 (23%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEK----------- 77
E +E Y +G LG G FG Y S L A K + K + + D+ +
Sbjct: 27 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR-ISDWGELPNGTRVPMEV 85
Query: 78 -------DDVRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAVLRV 118
G + ++ + S LFD I RG E A +
Sbjct: 86 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 145
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKATDFGLSVFFEEGKVYREIVGSPY 177
++ V CH GV+HRD+K EN L D N LK DFG ++ VY + G+
Sbjct: 146 VLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKD-TVYTDFDGTRV 201
Query: 178 YIAPE------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSASSS 214
Y PE +LL M D I++G++ F++ S
Sbjct: 202 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RVSXE 257
Query: 215 AIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
L+ L P R ++ HPW+++
Sbjct: 258 CQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 101/251 (40%), Gaps = 70/251 (27%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE------------- 85
K LG+G FG L E +TG +A K + K +V KD+V +
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA---KDEVAHTLTENRVLQNSRHPFL 72
Query: 86 ---------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHC-R 129
VM+Y +G LF + +SE A I+ ++ H +
Sbjct: 73 TALKYSFQTHDRLCFVMEYANG--GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 130
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYREIVGSPYYIAPEVL---- 184
V++RDLK EN + D++ +K TDFGL ++G + G+P Y+APEVL
Sbjct: 131 NVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 187
Query: 185 ------------------------LQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVH 220
+ +++ IL EI F R P A S L+
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKS----LLS 243
Query: 221 RMLTQDPKRRI 231
+L +DPK+R+
Sbjct: 244 GLLKKDPKQRL 254
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 29/181 (16%)
Query: 30 DVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSIS-----KRKLV-------KDYEK 77
D + YT +++G+G G Y + +TG + A + ++ K++L+ ++ +
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 76
Query: 78 DDVRGEVE----------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCH 127
++ ++ VM+YL+G +V E AAV R + + H
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGS---LTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 128 CRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLLQ 186
V+HRD+K +N L + +K TDFG + R +VG+PY++APEV+ +
Sbjct: 134 SNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR 190
Query: 187 K 187
K
Sbjct: 191 K 191
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 29/181 (16%)
Query: 30 DVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSIS-----KRKLV-------KDYEK 77
D + YT +++G+G G Y + +TG + A + ++ K++L+ ++ +
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 76
Query: 78 DDVRGEVE----------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCH 127
++ ++ VM+YL+G +V E AAV R + + H
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGS---LTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 128 CRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLLQ 186
V+HRD+K +N L + +K TDFG + R +VG+PY++APEV+ +
Sbjct: 134 SNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR 190
Query: 187 K 187
K
Sbjct: 191 K 191
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 110/286 (38%), Gaps = 84/286 (29%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSI-L 97
+++G G +G+ Y +N+ G FA K I K + +R E+ +++ L + L
Sbjct: 8 EKIGEGTYGVVY-KAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKL 65
Query: 98 FDRI----------------------VARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRD 135
+D I V G A + L ++ + CH R V+HRD
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 136 LKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVLL--QKMDQRV 192
LKP+N L E LK DFGL+ F + Y V + +Y AP+VL+ +K +
Sbjct: 126 LKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 193 D--------------AAILKG-------------------------------EINFQ-RD 206
D A + G + NF +
Sbjct: 183 DIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE 242
Query: 207 PFPSAS------SSAIELVHRMLTQDPKRRIIAAQVV-HPWLKESG 245
P P S S I+L+ +ML DP +RI A Q + H + KE+
Sbjct: 243 PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 29/181 (16%)
Query: 30 DVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSIS-----KRKLV-------KDYEK 77
D + YT +++G+G G Y + +TG + A + ++ K++L+ ++ +
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 77
Query: 78 DDVRGEVE----------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCH 127
++ ++ VM+YL+G +V E AAV R + + H
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGS---LTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 128 CRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLLQ 186
V+HRD+K +N L + +K TDFG + R +VG+PY++APEV+ +
Sbjct: 135 SNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR 191
Query: 187 K 187
K
Sbjct: 192 K 192
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 111/286 (38%), Gaps = 84/286 (29%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSI-L 97
+++G G +G+ Y +N+ G FA K I K + +R E+ +++ L + L
Sbjct: 8 EKIGEGTYGVVY-KAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKL 65
Query: 98 FDRI----------------------VARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRD 135
+D I V G A + L ++ + CH R V+HRD
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 136 LKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVLL--QKMDQRV 192
LKP+N L E LK DFGL+ F + Y V + +Y AP+VL+ +K +
Sbjct: 126 LKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 193 D--------AAILKG-------------------------------------EINFQ-RD 206
D A ++ G + NF +
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE 242
Query: 207 PFPSAS------SSAIELVHRMLTQDPKRRIIAAQVV-HPWLKESG 245
P P S S I+L+ +ML DP +RI A Q + H + KE+
Sbjct: 243 PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 38/177 (21%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRG----EVEVMQYLSGQPS 95
+LG G +G Y + T A K I ++E++ V G EV +++ L +
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIRL-----EHEEEGVPGTAIREVSLLKELQHRNI 95
Query: 96 ILFDRIVARGH---------------YSERAAAAVLRVI-------MGVVNVCHCRGVMH 133
I ++ H Y ++ +RVI + VN CH R +H
Sbjct: 96 IELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLH 155
Query: 134 RDLKPENFLFTSWD--ENALLKATDFGLSVFFEEGKVYREI---VGSPYYIAPEVLL 185
RDLKP+N L + D E +LK DFGL+ F G R+ + + +Y PE+LL
Sbjct: 156 RDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEIITLWYRPPEILL 210
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 37/182 (20%)
Query: 41 LGRGEFGITYLC---TENSTGLQFACKSISKRKLVKDYEKDDVRGEVE------------ 85
LG+G +G + T +TG FA K + K +V++ KD + E
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRN-AKDTAHTKAERNILEEVKHPFI 83
Query: 86 ---------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+++YLSG LF ++ G + E A L I + H +G
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSG--GELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPYYIAPEVLLQKMD 189
+++RDLKPEN + + +K TDFGL +G V G+ Y+APE+L++
Sbjct: 142 IIYRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 190 QR 191
R
Sbjct: 199 NR 200
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 37/182 (20%)
Query: 41 LGRGEFGITYLC---TENSTGLQFACKSISKRKLVKDYEKDDVRGEVE------------ 85
LG+G +G + T +TG FA K + K +V++ KD + E
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRN-AKDTAHTKAERNILEEVKHPFI 83
Query: 86 ---------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRG 130
+++YLSG LF ++ G + E A L I + H +G
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSG--GELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPYYIAPEVLLQKMD 189
+++RDLKPEN + + +K TDFGL +G V G+ Y+APE+L++
Sbjct: 142 IIYRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 190 QR 191
R
Sbjct: 199 NR 200
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 95/266 (35%), Gaps = 60/266 (22%)
Query: 31 VELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----------- 79
+E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 80 ------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAVLRVIMG 121
G + ++ + S LFD I RG E A + ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAP 181
V CH GV+HRD+K EN L LK DFG ++ VY + G+ Y P
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPP 178
Query: 182 E------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSASSSAIEL 218
E +LL M D I++G++ F++ S L
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ----RVSXECQHL 234
Query: 219 VHRMLTQDPKRRIIAAQVV-HPWLKE 243
+ L P R ++ HPW+++
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 112/287 (39%), Gaps = 86/287 (29%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSI-L 97
+++G G +G+ Y +N+ G FA K I K + +R E+ +++ L + L
Sbjct: 8 EKIGEGTYGVVY-KAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKL 65
Query: 98 FDRI----------------------VARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRD 135
+D I V G A + L ++ + CH R V+HRD
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 136 LKPENFLFTSWDENALLKATDFGLSVFF--EEGKVYREIVGSPYYIAPEVLL--QKMDQR 191
LKP+N L E LK DFGL+ F K EIV + +Y AP+VL+ +K
Sbjct: 126 LKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTT 181
Query: 192 VD--------AAILKG-------------------------------------EINFQ-R 205
+D A ++ G + NF
Sbjct: 182 IDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY 241
Query: 206 DPFPSAS------SSAIELVHRMLTQDPKRRIIAAQVV-HPWLKESG 245
+P P S S I+L+ +ML DP +RI A Q + H + KE+
Sbjct: 242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 95/266 (35%), Gaps = 60/266 (22%)
Query: 31 VELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDD----------- 79
+E Y +G LG G FG Y S L A K + K ++ E +
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 80 ------VRGEVEVMQYLSGQPSI------------LFDRIVARGHYSERAAAAVLRVIMG 121
G + ++ + S LFD I RG E A + ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAP 181
V CH GV+HRD+K EN L LK DFG ++ VY + G+ Y P
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPP 178
Query: 182 E------------------VLLQKM-----DQRVDAAILKGEINFQRDPFPSASSSAIEL 218
E +LL M D I+ G++ F++ SS L
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ----RVSSECQHL 234
Query: 219 VHRMLTQDPKRRIIAAQVV-HPWLKE 243
+ L P R ++ HPW+++
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
+M+YL G ++ ++ G E A +LR I+ ++ H +HRD+K N L +
Sbjct: 98 IMEYLGGGSAL---DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS- 153
Query: 146 WDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLLQKM-DQRVD 193
E+ +K DFG++ + ++ R VG+P+++APEV+ Q D + D
Sbjct: 154 --EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 201
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
+M+YL G ++ ++ G E A +LR I+ ++ H +HRD+K N L +
Sbjct: 83 IMEYLGGGSAL---DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS- 138
Query: 146 WDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLLQK-MDQRVD 193
E+ +K DFG++ + ++ R VG+P+++APEV+ Q D + D
Sbjct: 139 --EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 186
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
+M+YL G ++ ++ G E A +LR I+ ++ H +HRD+K N L +
Sbjct: 83 IMEYLGGGSAL---DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS- 138
Query: 146 WDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLLQK-MDQRVD 193
E+ +K DFG++ + ++ R VG+P+++APEV+ Q D + D
Sbjct: 139 --EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 186
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
+M+YL G ++ ++ G E A +LR I+ ++ H +HRD+K N L +
Sbjct: 103 IMEYLGGGSAL---DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS- 158
Query: 146 WDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLLQK-MDQRVD 193
E+ +K DFG++ + ++ R VG+P+++APEV+ Q D + D
Sbjct: 159 --EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 206
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 29/181 (16%)
Query: 30 DVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSIS-----KRKLV-------KDYEK 77
D + YT +++G+G G Y + +TG + A + ++ K++L+ ++ +
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN 77
Query: 78 DDVRGEVE----------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCH 127
++ ++ VM+YL+G +V E AAV R + + H
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGS---LTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 128 CRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLLQ 186
V+HR++K +N L + +K TDFG + R +VG+PY++APEV+ +
Sbjct: 135 SNQVIHRNIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR 191
Query: 187 K 187
K
Sbjct: 192 K 192
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 27/171 (15%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSILFDR 100
LG+G F + ++ T FA K + K L+K ++++ + E+ + + L+ Q + F
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 101 IVA-----------------------RGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLK 137
R +E A LR I+ H V+HRDLK
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 148
Query: 138 PENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVLLQK 187
N +E+ +K DFGL+ E +G+ + + G+P YIAPEVL +K
Sbjct: 149 LGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 196
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 27/171 (15%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSILF-- 98
LG+G F + ++ T FA K + K L+K ++++ + E+ + + L+ Q + F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 99 -----DRIVA----------------RGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLK 137
D + R +E A LR I+ H V+HRDLK
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 138 PENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVLLQK 187
N +E+ +K DFGL+ E +G+ + + G+P YIAPEVL +K
Sbjct: 145 LGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 192
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 27/171 (15%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSILF-- 98
LG+G F + ++ T FA K + K L+K ++++ + E+ + + L+ Q + F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 99 -----DRIVA----------------RGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLK 137
D + R +E A LR I+ H V+HRDLK
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 138 PENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVLLQK 187
N +E+ +K DFGL+ E +G+ + + G+P YIAPEVL +K
Sbjct: 145 LGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 192
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 43/193 (22%)
Query: 28 YEDVELH-------YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDV 80
+++VEL+ +++ + +GRG FG Y C + TG +A K + K+++ +
Sbjct: 177 WKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA 236
Query: 81 RGE--------------VEVMQYLSGQP---SILFD---------RIVARGHYSE---RA 111
E + M Y P S + D + G +SE R
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 112 AAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYRE 171
AA +I+G+ ++ H R V++RDLKP N L DE+ ++ +D GL+ F + K +
Sbjct: 297 YAA--EIILGLEHM-HNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS 350
Query: 172 IVGSPYYIAPEVL 184
VG+ Y+APEVL
Sbjct: 351 -VGTHGYMAPEVL 362
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 43/193 (22%)
Query: 28 YEDVELH-------YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDV 80
+++VEL+ +++ + +GRG FG Y C + TG +A K + K+++ +
Sbjct: 176 WKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA 235
Query: 81 RGE--------------VEVMQYLSGQP---SILFD---------RIVARGHYSE---RA 111
E + M Y P S + D + G +SE R
Sbjct: 236 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 295
Query: 112 AAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYRE 171
AA +I+G+ ++ H R V++RDLKP N L DE+ ++ +D GL+ F + K +
Sbjct: 296 YAA--EIILGLEHM-HNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS 349
Query: 172 IVGSPYYIAPEVL 184
VG+ Y+APEVL
Sbjct: 350 -VGTHGYMAPEVL 361
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 37/180 (20%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
++ I K++GRG+F Y G+ A K + L+ + D E+++++ L+
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-H 91
Query: 94 PSIL-----------------------FDRIVARGHYSERAAAAVLRVIMG-VVNVC--- 126
P+++ R++ H+ ++ R + V +C
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIK--HFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 127 ---HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFF-EEGKVYREIVGSPYYIAPE 182
H R VMHRD+KP N T+ ++K D GL FF + +VG+PYY++PE
Sbjct: 150 EHMHSRRVMHRDIKPANVFITA---TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 206
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 30/211 (14%)
Query: 41 LGRGEFGITYLCTENSTGLQFACK--------------SISKRKLVKDYEKDDVRGEVEV 86
+G G +G+ C TG A K ++ + KL+K +++ +EV
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 87 MQ-----YLSGQ---PSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKP 138
+ YL + +IL D + + L I+ + CH ++HRD+KP
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKP 152
Query: 139 ENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVLLQ--KMDQRVDAA 195
EN L + ++ ++K DFG + G+VY + V + +Y APE+L+ K + VD
Sbjct: 153 ENILVS---QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVW 209
Query: 196 ILKGEIN--FQRDPFPSASSSAIELVHRMLT 224
+ + F +P S +L H M+
Sbjct: 210 AIGCLVTEMFMGEPLFPGDSDIDQLYHIMMC 240
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 43/193 (22%)
Query: 28 YEDVELH-------YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDV 80
+++VEL+ +++ + +GRG FG Y C + TG +A K + K+++ +
Sbjct: 177 WKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA 236
Query: 81 RGE--------------VEVMQYLSGQP---SILFD---------RIVARGHYSE---RA 111
E + M Y P S + D + G +SE R
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 112 AAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYRE 171
AA +I+G+ ++ H R V++RDLKP N L DE+ ++ +D GL+ F + K +
Sbjct: 297 YAA--EIILGLEHM-HNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS 350
Query: 172 IVGSPYYIAPEVL 184
VG+ Y+APEVL
Sbjct: 351 -VGTHGYMAPEVL 362
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 43/193 (22%)
Query: 28 YEDVELH-------YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDV 80
+++VEL+ +++ + +GRG FG Y C + TG +A K + K+++ +
Sbjct: 177 WKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA 236
Query: 81 RGE--------------VEVMQYLSGQP---SILFD---------RIVARGHYSE---RA 111
E + M Y P S + D + G +SE R
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 112 AAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYRE 171
AA +I+G+ ++ H R V++RDLKP N L DE+ ++ +D GL+ F + K +
Sbjct: 297 YAA--EIILGLEHM-HNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS 350
Query: 172 IVGSPYYIAPEVL 184
VG+ Y+APEVL
Sbjct: 351 -VGTHGYMAPEVL 362
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 27/171 (15%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSILF-- 98
LG+G F + ++ T FA K + K L+K ++++ + E+ + + L+ Q + F
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 99 -----DRIVA----------------RGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLK 137
D + R +E A LR I+ H V+HRDLK
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 138 PENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVLLQK 187
N +E+ +K DFGL+ E +G+ + + G+P YIAPEVL +K
Sbjct: 167 LGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 214
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 27/171 (15%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSILFDR 100
LG+G F + ++ T FA K + K L+K ++++ + E+ + + L+ Q + F
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 101 IVA-----------------------RGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLK 137
R +E A LR I+ H V+HRDLK
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 138 PENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVLLQK 187
N +E+ +K DFGL+ E +G+ + + G+P YIAPEVL +K
Sbjct: 169 LGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 216
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 27/171 (15%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSILF-- 98
LG+G F + ++ T FA K + K L+K ++++ + E+ + + L+ Q + F
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 99 -----DRIVA----------------RGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLK 137
D + R +E A LR I+ H V+HRDLK
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 142
Query: 138 PENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVLLQK 187
N +E+ +K DFGL+ E +G+ + + G+P YIAPEVL +K
Sbjct: 143 LGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 190
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 29/191 (15%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ 88
+D E ++ +E+G G FG Y + A K +S + + D+ EV +Q
Sbjct: 50 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 89 YLSGQPSILFDRIVARGHYS-----------------------ERAAAAVLRVIMGVVNV 125
L +I + R H + E AAV + +
Sbjct: 110 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 169
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLL 185
H ++HRD+K N L + E L+K DFG + + VG+PY++APEV+L
Sbjct: 170 LHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVIL 223
Query: 186 QKMDQRVDAAI 196
+ + D +
Sbjct: 224 AMDEGQYDGKV 234
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
+M+YL G ++ ++ G E A +LR I+ ++ H +HRD+K N L +
Sbjct: 95 IMEYLGGGSAL---DLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS- 150
Query: 146 WDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLLQ 186
E +K DFG++ + ++ R VG+P+++APEV+ Q
Sbjct: 151 --EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQ 190
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
+M+YL G ++ ++ G + E A +L+ I+ ++ H +HRD+K N L +
Sbjct: 99 IMEYLGGGSAL---DLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS- 154
Query: 146 WDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLLQ 186
E +K DFG++ + ++ R VG+P+++APEV+ Q
Sbjct: 155 --EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 29/191 (15%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ 88
+D E ++ +E+G G FG Y + A K +S + + D+ EV +Q
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 89 YLSGQPSILFDRIVARGHYS-----------------------ERAAAAVLRVIMGVVNV 125
L +I + R H + E AAV + +
Sbjct: 71 KLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 130
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLL 185
H ++HRD+K N L + E L+K DFG + + VG+PY++APEV+L
Sbjct: 131 LHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVIL 184
Query: 186 QKMDQRVDAAI 196
+ + D +
Sbjct: 185 AMDEGQYDGKV 195
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 92/244 (37%), Gaps = 52/244 (21%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSI-- 96
K +G+G FG L + + +A K + K+ ++K E+ + E V+ P +
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 97 ----------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHR 134
LF + + E A I + H +++R
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 163
Query: 135 DLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYREIVGSPYYIAPEVL-LQKMDQRV 192
DLKPEN L D + TDFGL E G+P Y+APEVL Q D+ V
Sbjct: 164 DLKPENILL---DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTV 220
Query: 193 DAAILKG---EINFQRDPF--------------------PSASSSAIELVHRMLTQDPKR 229
D L E+ + PF P+ ++SA L+ +L +D +
Sbjct: 221 DWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTK 280
Query: 230 RIIA 233
R+ A
Sbjct: 281 RLGA 284
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 33/172 (19%)
Query: 97 LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDEN-ALLKAT 155
LFD I RG E A + ++ V CH GV+HRD+K EN L D N LK
Sbjct: 144 LFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLI 200
Query: 156 DFGLSVFFEEGKVYREIVGSPYYIAPE------------------VLLQKM-----DQRV 192
DFG ++ VY + G+ Y PE +LL M
Sbjct: 201 DFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
Query: 193 DAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
D I++G++ F++ SS L+ L P R ++ HPW+++
Sbjct: 260 DEEIIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 36/186 (19%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ + + LG G FG TG Q A K + K+ E+ + E+++M+ L+ P
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL--EIQIMKKLN-HP 73
Query: 95 SILFDRIVARG---------------------------------HYSERAAAAVLRVIMG 121
+++ R V G E +L I
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAP 181
+ H ++HRDLKPEN + + + K D G + ++G++ E VG+ Y+AP
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 182 EVLLQK 187
E+L QK
Sbjct: 194 ELLEQK 199
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 36/186 (19%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ + + LG G FG TG Q A K + K+ E+ + E+++M+ L+ P
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL--EIQIMKKLN-HP 72
Query: 95 SILFDRIVARG---------------------------------HYSERAAAAVLRVIMG 121
+++ R V G E +L I
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAP 181
+ H ++HRDLKPEN + + + K D G + ++G++ E VG+ Y+AP
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 182 EVLLQK 187
E+L QK
Sbjct: 193 ELLEQK 198
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 127/316 (40%), Gaps = 63/316 (19%)
Query: 25 GRTYEDVELHYTIGKELGRGEFGITY---LCTENSTGLQ-------FACKSISKRKLVKD 74
G+T E E+ YT K +G G FG+ + L + ++ F + + ++VK
Sbjct: 32 GKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKH 91
Query: 75 ----------YEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVI----- 119
Y D + EV + L P ++ A HY++ + +I
Sbjct: 92 PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYR---ASRHYAKLKQTMPMLLIKLYMY 148
Query: 120 --MGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY 177
+ + H G+ HRD+KP+N L + +LK DFG + G+ + S Y
Sbjct: 149 QLLRSLAYIHSIGICHRDIKPQNLLLDP--PSGVLKLIDFGSAKILIAGEPNVSXICSRY 206
Query: 178 YIAPEVLLQKMDQRVD----------AAILKGEINFQRDPFPSASSSAIELVHRMLTQDP 227
Y APE++ + + A +++G+ F P S +E++ + T P
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF---PGESGIDQLVEIIKVLGT--P 261
Query: 228 KRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQNT-AMNKLKKL-------------A 273
R I + ++P E +P + +FR + A++ + +L A
Sbjct: 262 SREQI--KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEA 319
Query: 274 LKWHSYDELREGSAKL 289
L +DELR G A++
Sbjct: 320 LCHPFFDELRTGEARM 335
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 35/174 (20%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVEVMQYLSGQPSILF 98
LG G+F Y + +T A K I R KD E++++Q LS P+I+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNII- 75
Query: 99 DRIVARGHYSE--------------------------RAAAAVLRVIMGVVNVCHCRGVM 132
+ A GH S A +L + G+ H ++
Sbjct: 76 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL-EYLHQHWIL 134
Query: 133 HRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVLL 185
HRDLKP N L DEN +LK DFGL+ F + Y V + +Y APE+L
Sbjct: 135 HRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 52/105 (49%), Gaps = 25/105 (23%)
Query: 124 NVCHCRG------VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREI---VG 174
+V CRG + HRD K +N L S D A+L DFGL+V FE GK + VG
Sbjct: 131 DVPWCRGEGHKPSIAHRDFKSKNVLLKS-DLTAVL--ADFGLAVRFEPGKPPGDTHGQVG 187
Query: 175 SPYYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELV 219
+ Y+APEV L+G INFQRD F A+ LV
Sbjct: 188 TRRYMAPEV-------------LEGAINFQRDAFLRIDMYAMGLV 219
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 56/210 (26%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
V +++ + D++ G +E + +++ G+ + H V+HRDLKP+N L TS
Sbjct: 97 VFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL-DFLHSHRVVHRDLKPQNILVTS 155
Query: 146 WDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ------------------- 186
+ +K DFGL+ + +V + +Y APEVLLQ
Sbjct: 156 ---SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
Query: 187 --------------KMDQRVDAAILKGEINFQRD------PFPSASSSAIE--------- 217
++ + +D L GE ++ RD F S S+ IE
Sbjct: 213 FRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDEL 272
Query: 218 ---LVHRMLTQDPKRRIIA-AQVVHPWLKE 243
L+ + LT +P +RI A + + HP+ ++
Sbjct: 273 GKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 56/210 (26%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
V +++ + D++ G +E + +++ G+ + H V+HRDLKP+N L TS
Sbjct: 97 VFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL-DFLHSHRVVHRDLKPQNILVTS 155
Query: 146 WDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ------------------- 186
+ +K DFGL+ + +V + +Y APEVLLQ
Sbjct: 156 ---SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
Query: 187 --------------KMDQRVDAAILKGEINFQRD------PFPSASSSAIE--------- 217
++ + +D L GE ++ RD F S S+ IE
Sbjct: 213 FRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDEL 272
Query: 218 ---LVHRMLTQDPKRRIIA-AQVVHPWLKE 243
L+ + LT +P +RI A + + HP+ ++
Sbjct: 273 GKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
V +++ + D++ G +E + +++ G+ + H V+HRDLKP+N L TS
Sbjct: 97 VFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL-DFLHSHRVVHRDLKPQNILVTS 155
Query: 146 WDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
+ +K DFGL+ + +V + +Y APEVLLQ
Sbjct: 156 ---SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 193
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 39/181 (21%)
Query: 35 YTIGKELGRGEFGITYLCTE--NSTGLQFACKSISKRKLVKDYEKDDVRGEVE------- 85
+ + K LG+G FG +L + S Q + K+ +K +D VR ++E
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK--VRDRVRTKMERDILVEV 83
Query: 86 --------------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNV 125
++ +L G LF R+ ++E L + ++
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS--VFFEEGKVYREIVGSPYYIAPEV 183
H G+++RDLKPEN L DE +K TDFGLS E K Y G+ Y+APEV
Sbjct: 142 LHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPEV 197
Query: 184 L 184
+
Sbjct: 198 V 198
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 39/181 (21%)
Query: 35 YTIGKELGRGEFGITYLCTE--NSTGLQFACKSISKRKLVKDYEKDDVRGEVE------- 85
+ + K LG+G FG +L + S Q + K+ +K +D VR ++E
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK--VRDRVRTKMERDILVEV 83
Query: 86 --------------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNV 125
++ +L G LF R+ ++E L + ++
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS--VFFEEGKVYREIVGSPYYIAPEV 183
H G+++RDLKPEN L DE +K TDFGLS E K Y G+ Y+APEV
Sbjct: 142 LHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPEV 197
Query: 184 L 184
+
Sbjct: 198 V 198
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 39/181 (21%)
Query: 35 YTIGKELGRGEFGITYLCTE--NSTGLQFACKSISKRKLVKDYEKDDVRGEVE------- 85
+ + K LG+G FG +L + S Q + K+ +K +D VR ++E
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK--VRDRVRTKMERDILVEV 84
Query: 86 --------------------VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNV 125
++ +L G LF R+ ++E L + ++
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRG--GDLFTRLSKEVMFTEEDVKFYLAELALALDH 142
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS--VFFEEGKVYREIVGSPYYIAPEV 183
H G+++RDLKPEN L DE +K TDFGLS E K Y G+ Y+APEV
Sbjct: 143 LHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPEV 198
Query: 184 L 184
+
Sbjct: 199 V 199
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 47/244 (19%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKS----------------ISKRKLV 72
ED L + + LGRG FG + C +TG +ACK + K+ L
Sbjct: 184 EDWFLDFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 73 KDYE------------KDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIM 120
K + K D+ + +M + I G RA +++
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 121 GVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV-YREIVGSPYYI 179
G+ ++ H R +++RDLKPEN L D++ ++ +D GL+V + G+ + G+P ++
Sbjct: 301 GLEHL-HQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 180 APEVLL-QKMDQRVD---AAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ 235
APE+LL ++ D VD + E+ R PF A +E ++ K+R++
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPF-RARGEKVE------NKELKQRVLEQA 409
Query: 236 VVHP 239
V +P
Sbjct: 410 VTYP 413
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 47/244 (19%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKS----------------ISKRKLV 72
ED L + + LGRG FG + C +TG +ACK + K+ L
Sbjct: 184 EDWFLDFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 73 KDYE------------KDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIM 120
K + K D+ + +M + I G RA +++
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 121 GVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV-YREIVGSPYYI 179
G+ ++ H R +++RDLKPEN L D++ ++ +D GL+V + G+ + G+P ++
Sbjct: 301 GLEHL-HQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 180 APEVLL-QKMDQRVD---AAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ 235
APE+LL ++ D VD + E+ R PF A +E ++ K+R++
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPF-RARGEKVE------NKELKQRVLEQA 409
Query: 236 VVHP 239
V +P
Sbjct: 410 VTYP 413
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 47/244 (19%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKS----------------ISKRKLV 72
ED L + + LGRG FG + C +TG +ACK + K+ L
Sbjct: 184 EDWFLDFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 73 KDYE------------KDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIM 120
K + K D+ + +M + I G RA +++
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 121 GVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV-YREIVGSPYYI 179
G+ ++ H R +++RDLKPEN L D++ ++ +D GL+V + G+ + G+P ++
Sbjct: 301 GLEHL-HQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 180 APEVLL-QKMDQRVD---AAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ 235
APE+LL ++ D VD + E+ R PF A +E ++ K+R++
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPF-RARGEKVE------NKELKQRVLEQA 409
Query: 236 VVHP 239
V +P
Sbjct: 410 VTYP 413
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 12/111 (10%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
E A + R I+ ++ H V+HRD+K +N L T ENA +K DFG+S +
Sbjct: 128 EEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVG 184
Query: 169 YRE-IVGSPYYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIEL 218
R +G+PY++APEV+ D+ DA +F+ D + S +AIE+
Sbjct: 185 RRNTFIGTPYWMAPEVI--ACDENPDAT-----YDFKSDLW-SLGITAIEM 227
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 47/244 (19%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKS----------------ISKRKLV 72
ED L + + LGRG FG + C +TG +ACK + K+ L
Sbjct: 184 EDWFLDFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 73 KDYE------------KDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIM 120
K + K D+ + +M + I G RA +++
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 121 GVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV-YREIVGSPYYI 179
G+ ++ H R +++RDLKPEN L D++ ++ +D GL+V + G+ + G+P ++
Sbjct: 301 GLEHL-HQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFM 356
Query: 180 APEVLL-QKMDQRVD---AAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ 235
APE+LL ++ D VD + E+ R PF A +E ++ K+R++
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPF-RARGEKVE------NKELKQRVLEQA 409
Query: 236 VVHP 239
V +P
Sbjct: 410 VTYP 413
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 32/175 (18%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSI-----SKRKLVKDYEKD----------- 78
Y I +LG G YL + ++ A K+I K + +K +E++
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 79 -----DVRGEVE----VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
DV E + VM+Y+ G P+ L + I + G S A I+ + H
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEG-PT-LSEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYR--EIVGSPYYIAPE 182
++HRD+KP+N L D N LK DFG++ E + + ++G+ Y +PE
Sbjct: 131 RIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE 182
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 33/177 (18%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ------ 88
+ I ELG G FG Y TG A K I + + E +D E+E++
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPY 69
Query: 89 --------YLSGQPSILF--------DRIVA---RGHYSERAAAAVLRVIMGVVNVCHCR 129
Y G+ I+ D I+ RG +E V R ++ +N H +
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSK 128
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLL 185
++HRDLK N L T ++ DFG+S + R+ +G+PY++APEV++
Sbjct: 129 RIIHRDLKAGNVLMTL---EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVM 182
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 33/177 (18%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ------ 88
+ I ELG G FG Y TG A K I + + E +D E+E++
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPY 77
Query: 89 --------YLSGQPSILF--------DRIVA---RGHYSERAAAAVLRVIMGVVNVCHCR 129
Y G+ I+ D I+ RG +E V R ++ +N H +
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSK 136
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLL 185
++HRDLK N L T ++ DFG+S + R+ +G+PY++APEV++
Sbjct: 137 RIIHRDLKAGNVLMTL---EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVM 190
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++R + ++ H ++HRDLKPEN L TS +K DFGL+ + +V
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALTPVVV 181
Query: 175 SPYYIAPEVLLQ 186
+ +Y APEVLLQ
Sbjct: 182 TLWYRAPEVLLQ 193
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVM------- 87
+ I K +GRG F + TG +A K ++K ++K E R E +V+
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122
Query: 88 -------------QYLSGQPSILFDRIVARGHYSERAAAAVLRV----IMGVVNVCHCRG 130
YL + + D + + ER A + R I+ ++ H G
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREI--VGSPYYIAPEVL 184
+HRD+KP+N L D ++ DFG + R + VG+P Y++PE+L
Sbjct: 183 YVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEIL 235
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++R + ++ H ++HRDLKPEN L TS +K DFGL+ + +V
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALAPVVV 173
Query: 175 SPYYIAPEVLLQ 186
+ +Y APEVLLQ
Sbjct: 174 TLWYRAPEVLLQ 185
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++R + ++ H ++HRDLKPEN L TS +K DFGL+ + +V
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALDPVVV 173
Query: 175 SPYYIAPEVLLQ 186
+ +Y APEVLLQ
Sbjct: 174 TLWYRAPEVLLQ 185
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 84/190 (44%), Gaps = 45/190 (23%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ 88
ED E+ YTIG G +G S G K + + + EK + EV +++
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLR 60
Query: 89 YLSGQPSIL--FDRIVARGH--------YSERAAAA-----------------VLRVIMG 121
L P+I+ +DRI+ R + Y E A VLRV+
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 122 V---VNVCHCRG-----VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVY-REI 172
+ + CH R V+HRDLKP N +F +N +K DFGL+ + + +E
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDEDFAKEF 176
Query: 173 VGSPYYIAPE 182
VG+PYY++PE
Sbjct: 177 VGTPYYMSPE 186
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 91/240 (37%), Gaps = 52/240 (21%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSI---- 96
LG+G FG L T +A K + K +++D + + E V+ L P +
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 97 --------------------LFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDL 136
L I G + E A I + H RG+++RDL
Sbjct: 87 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDL 146
Query: 137 KPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPYYIAPEVL-LQKMDQRVD- 193
K +N + D +K DFG+ +G RE G+P YIAPE++ Q + VD
Sbjct: 147 KLDNVML---DSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDW 203
Query: 194 --AAILKGEINFQRDPF--------------------PSASSSAIELVHRMLTQDPKRRI 231
+L E+ + PF S S A+ + ++T+ P +R+
Sbjct: 204 WAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRL 263
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++R + ++ H ++HRDLKPEN L TS +K DFGL+ + +V
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALFPVVV 173
Query: 175 SPYYIAPEVLLQ 186
+ +Y APEVLLQ
Sbjct: 174 TLWYRAPEVLLQ 185
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 48/188 (25%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
Y +++G G FG L G Q+ K I+ ++ E+++ R EV V+ + P
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-EREESRREVAVLANMK-HP 83
Query: 95 SI------------------------LFDRIVARGHYSERAAAAVL----RVIMGVVNVC 126
+I LF RI A VL +++ V +C
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRI--------NAQKGVLFQEDQILDWFVQIC 135
Query: 127 ------HCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYI 179
H R ++HRD+K +N T ++ ++ DFG++ V ++ R +G+PYY+
Sbjct: 136 LALKHVHDRKILHRDIKSQNIFLT---KDGTVQLGDFGIARVLNSTVELARACIGTPYYL 192
Query: 180 APEVLLQK 187
+PE+ K
Sbjct: 193 SPEICENK 200
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 33/178 (18%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVM------- 87
+ I K +GRG FG + + FA K ++K +++K E R E +V+
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 88 -------------------QYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHC 128
Y+ G L + R E A L ++ ++ H
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR--LPEEMARFYLAEMVIAIDSVHQ 193
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREI-VGSPYYIAPEVL 184
+HRD+KP+N L D N ++ DFG + E+G V + VG+P YI+PE+L
Sbjct: 194 LHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEIL 248
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 84/191 (43%), Gaps = 36/191 (18%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
VM+Y+ G L D + G + + A V+ +N H G++HRD+KP N L ++
Sbjct: 94 VMEYVDG--VTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISA 151
Query: 146 WDENALLKATDFGLS-VFFEEGKVYRE---IVGSPYYIAPE-VLLQKMDQRVDA------ 194
+ +K DFG++ + G + ++G+ Y++PE +D R D
Sbjct: 152 TNA---VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 195 --AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPI 252
+L GE F D S + + ++ + +DP + P + G ++D +
Sbjct: 209 LYEVLTGEPPFTGD-------SPVSVAYQHVREDP---------IPPSARHEGLSAD--L 250
Query: 253 DTAVIFRMKQN 263
D V+ + +N
Sbjct: 251 DAVVLKALAKN 261
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 31/180 (17%)
Query: 31 VELHYTIGKELGRGEFGITYLCTENSTGLQFACK--------------SISKRKLVKDYE 76
+E + IGK +G G +G+ + C TG A K ++ + +++K +
Sbjct: 2 MEKYEKIGK-IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 77 KDDVRGEVEVM----------QYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVC 126
++ +EV +Y DR RG E ++ + VN C
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR-YQRG-VPEHLVKSITWQTLQAVNFC 118
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVLL 185
H +HRD+KPEN L T +++++K DFG + Y + V + +Y +PE+L+
Sbjct: 119 HKHNCIHRDVKPENILIT---KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLV 175
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREI---VGSPYYIAPEV 183
H + HRD+K +N L + N DFGL++ FE GK + VG+ Y+APEV
Sbjct: 148 HKPAISHRDIKSKNVLLKN---NLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
Query: 184 LLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELV 219
L +G INFQRD F A+ LV
Sbjct: 205 L-------------EGAINFQRDAFLRIDMYAMGLV 227
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 33/177 (18%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ I ELG G FG Y T + A K I + + E +D E++++ P
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILAS-CDHP 94
Query: 95 SI--LFDRIVARGHY-----------------------SERAAAAVLRVIMGVVNVCHCR 129
+I L D + +E V + + +N H
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLL 185
++HRDLK N LFT + +K DFG+S R+ +G+PY++APEV++
Sbjct: 155 KIIHRDLKAGNILFTL---DGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVM 208
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +SK
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYREL 84
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 141
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 196
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 257 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 316 AHAYFAQYHDPDDEPV 331
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 33/177 (18%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ I ELG G FG Y T + A K I + + E +D E++++ P
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILAS-CDHP 94
Query: 95 SI--LFDRIVARGHY-----------------------SERAAAAVLRVIMGVVNVCHCR 129
+I L D + +E V + + +N H
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLL 185
++HRDLK N LFT + +K DFG+S R+ +G+PY++APEV++
Sbjct: 155 KIIHRDLKAGNILFTL---DGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVM 208
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKXQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKXQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 33/177 (18%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ I ELG G FG Y T + A K I + + E +D E++++ P
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILAS-CDHP 94
Query: 95 SI--LFDRIVARGHY-----------------------SERAAAAVLRVIMGVVNVCHCR 129
+I L D + +E V + + +N H
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYRE-IVGSPYYIAPEVLL 185
++HRDLK N LFT + +K DFG+S R+ +G+PY++APEV++
Sbjct: 155 KIIHRDLKAGNILFTL---DGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVM 208
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKSQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E++ LK DFGL ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLCRHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACK--------------SISKRKLVKDYEKDDVRGEV 84
+++G G +G+ Y TG A K +I + L+K+ ++ +
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 85 EVM----------QYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHR 134
+V+ ++LS D G + + +++ G+ CH V+HR
Sbjct: 70 DVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLHR 128
Query: 135 DLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVLL 185
DLKPEN L + E A +K DFGL+ F + Y V + +Y APE+LL
Sbjct: 129 DLKPENLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACK--------------SISKRKLVKDYEKDDVRGEV 84
+++G G +G+ Y TG A K +I + L+K+ ++ +
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 85 EVM----------QYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHR 134
+V+ ++LS D G + + +++ G+ CH V+HR
Sbjct: 72 DVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLHR 130
Query: 135 DLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVLL 185
DLKPEN L + E A +K DFGL+ F + Y V + +Y APE+LL
Sbjct: 131 DLKPENLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 122/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 131
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E++ LK DFGL+ ++ V
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLARHTDDEMT--GYVA 186
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 122/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 135
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E++ LK DFGL+ ++ V
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLARHTDDEMT--GYVA 190
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 251 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 36/173 (20%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSILFDR 100
LG+G FG C +TG +ACK + K+++ K + E ++++ ++ + F
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR----FVV 247
Query: 101 IVARGHYSERAAAAVL-----------------------RVIMGVVNVC------HCRGV 131
+A + ++ A VL R + +C H +
Sbjct: 248 SLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI 307
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
++RDLKPEN L D++ ++ +D GL+V EG+ + VG+ Y+APEV+
Sbjct: 308 VYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 108 SERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK 167
+E V + + +N H ++HRDLK N LFT + +K DFG+S
Sbjct: 106 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL---DGDIKLADFGVSAKNTRTX 162
Query: 168 VYR--EIVGSPYYIAPEVLL 185
+ R +G+PY++APEV++
Sbjct: 163 IQRRDSFIGTPYWMAPEVVM 182
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 36/173 (20%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSILFDR 100
LG+G FG C +TG +ACK + K+++ K + E ++++ ++ + F
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR----FVV 247
Query: 101 IVARGHYSERAAAAVL-----------------------RVIMGVVNVC------HCRGV 131
+A + ++ A VL R + +C H +
Sbjct: 248 SLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI 307
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
++RDLKPEN L D++ ++ +D GL+V EG+ + VG+ Y+APEV+
Sbjct: 308 VYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 134
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 189
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 250 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 36/191 (18%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
VM+Y+ G L D + G + + A V+ +N H G++HRD+KP N + ++
Sbjct: 94 VMEYVDG--VTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 146 WDENALLKATDFGLS-VFFEEGKVYRE---IVGSPYYIAPE-VLLQKMDQRVDA------ 194
+ +K DFG++ + G + ++G+ Y++PE +D R D
Sbjct: 152 TNA---VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 195 --AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPI 252
+L GE F D S + + ++ + +DP + P + G ++D +
Sbjct: 209 LYEVLTGEPPFTGD-------SPVSVAYQHVREDP---------IPPSARHEGLSAD--L 250
Query: 253 DTAVIFRMKQN 263
D V+ + +N
Sbjct: 251 DAVVLKALAKN 261
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 18 LNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 134
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLARHTDDEMT--GYVA 189
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 250 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GXVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 24 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 140
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 195
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 255
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 256 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 315 AHAYFAQYHDPDDEPV 330
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 131
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 186
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 131
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 186
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 136
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 191
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 252 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 311 AHAYFAQYHDPDDEPV 326
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 141
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 196
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 257 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 316 AHAYFAQYHDPDDEPV 331
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 125
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 180
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 241 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 300 AHAYFAQYHDPDDEPV 315
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 141
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 196
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 257 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 316 AHAYFAQYHDPDDEPV 331
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 36/191 (18%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
VM+Y+ G L D + G + + A V+ +N H G++HRD+KP N + ++
Sbjct: 94 VMEYVDG--VTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 146 WDENALLKATDFGLS-VFFEEGKVYRE---IVGSPYYIAPE-VLLQKMDQRVDA------ 194
+ +K DFG++ + G + ++G+ Y++PE +D R D
Sbjct: 152 TNA---VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 195 --AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPI 252
+L GE F D S + + ++ + +DP + P + G ++D +
Sbjct: 209 LYEVLTGEPPFTGD-------SPVSVAYQHVREDP---------IPPSARHEGLSAD--L 250
Query: 253 DTAVIFRMKQN 263
D V+ + +N
Sbjct: 251 DAVVLKALAKN 261
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 36/191 (18%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
VM+Y+ G L D + G + + A V+ +N H G++HRD+KP N + ++
Sbjct: 94 VMEYVDG--VTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 146 WDENALLKATDFGLS-VFFEEGKVYRE---IVGSPYYIAPE-VLLQKMDQRVDA------ 194
+ +K DFG++ + G + ++G+ Y++PE +D R D
Sbjct: 152 TNA---VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 195 --AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPI 252
+L GE F D S + + ++ + +DP + P + G ++D +
Sbjct: 209 LYEVLTGEPPFTGD-------SPVSVAYQHVREDP---------IPPSARHEGLSAD--L 250
Query: 253 DTAVIFRMKQN 263
D V+ + +N
Sbjct: 251 DAVVLKALAKN 261
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 134
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 189
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 250 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 11 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 70
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 71 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 127
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 128 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 182
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 242
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 243 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 301
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 302 AHAYFAQYHDPDDEPV 317
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 12 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 71
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 72 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 128
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 129 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 183
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 184 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 243
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 244 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 302
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 303 AHAYFAQYHDPDDEPV 318
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 131
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 186
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 24 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 140
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLARHTDDEMT--GYVA 195
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 255
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 256 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 315 AHAYFAQYHDPDDEPV 330
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 10 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 70 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 126
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 181
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 241
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 242 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 300
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 301 AHAYFAQYHDPDDEPV 316
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 32 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 91
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 92 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 148
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 203
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 263
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 264 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 322
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 323 AHAYFAQYHDPDDEPV 338
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + ++++G+ ++ H G++HRDLKP N + S +A LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLVGIKHL-HSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPYVVTRYYRAPEVIL 198
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 10 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 70 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 126
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 181
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 241
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 242 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 300
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 301 AHAYFAQYHDPDDEPV 316
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 45/190 (23%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ 88
ED E+ YTIG G +G S G K + + + EK + EV +++
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLR 60
Query: 89 YLSGQPSIL--FDRIVARGH--------YSERAAAA-----------------VLRVIMG 121
L P+I+ +DRI+ R + Y E A VLRV+
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 122 V---VNVCHCRG-----VMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREI 172
+ + CH R V+HRDLKP N +F +N +K DFGL+ + + +
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDTSFAKTF 176
Query: 173 VGSPYYIAPE 182
VG+PYY++PE
Sbjct: 177 VGTPYYMSPE 186
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 135
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 190
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 251 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 135
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 190
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 251 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 45/190 (23%)
Query: 29 EDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ 88
ED E+ YTIG G +G S G K + + + EK + EV +++
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLR 60
Query: 89 YLSGQPSIL--FDRIVARGH--------YSERAAAA-----------------VLRVIMG 121
L P+I+ +DRI+ R + Y E A VLRV+
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 122 V---VNVCHCRG-----VMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREI 172
+ + CH R V+HRDLKP N +F +N +K DFGL+ + + +
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDTSFAKAF 176
Query: 173 VGSPYYIAPE 182
VG+PYY++PE
Sbjct: 177 VGTPYYMSPE 186
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 134
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLARHTDDEMT--GYVA 189
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 250 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 149
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 204
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 264
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 265 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 324 AHAYFAQYHDPDDEPV 339
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + ++++G+ ++ H G++HRDLKP N + S +A LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLVGIKHL-HSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPYVVTRYYRAPEVIL 198
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + ++++G+ ++ H G++HRDLKP N + S +A LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLVGIKHL-HSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPYVVTRYYRAPEVIL 198
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 36 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 152
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 207
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 267
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 268 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 327 AHAYFAQYHDPDDEPV 342
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 36 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 152
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMX--GYVA 207
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 267
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 268 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 327 AHAYFAQYHDPDDEPV 342
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 32/185 (17%)
Query: 29 EDVELH---YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE 85
++++LH + I K +GRG FG + +T +A K ++K +++K E R E +
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 86 VM--------------------QYLSGQPSILFDRIVARGHYSERAAAAVLRVIMG---- 121
V+ YL + D + + ++ + R +G
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 186
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREI-VGSPYYI 179
++ H +HRD+KP+N L D N ++ DFG + ++G V + VG+P YI
Sbjct: 187 AIDSIHQLHYVHRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYI 243
Query: 180 APEVL 184
+PE+L
Sbjct: 244 SPEIL 248
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 32/185 (17%)
Query: 29 EDVELH---YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE 85
++++LH + I K +GRG FG + +T +A K ++K +++K E R E +
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 86 VM--------------------QYLSGQPSILFDRIVARGHYSERAAAAVLRVIMG---- 121
V+ YL + D + + ++ + R +G
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 202
Query: 122 VVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREI-VGSPYYI 179
++ H +HRD+KP+N L D N ++ DFG + ++G V + VG+P YI
Sbjct: 203 AIDSIHQLHYVHRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYI 259
Query: 180 APEVL 184
+PE+L
Sbjct: 260 SPEIL 264
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 36/191 (18%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
VM+Y+ G L D + G + + A V+ +N H G++HRD+KP N + ++
Sbjct: 111 VMEYVDG--VTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 168
Query: 146 WDENALLKATDFGLS-VFFEEGKVYRE---IVGSPYYIAPE-VLLQKMDQRVDA------ 194
+ +K DFG++ + G + ++G+ Y++PE +D R D
Sbjct: 169 TNA---VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 225
Query: 195 --AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPI 252
+L GE F D S + + ++ + +DP + P + G ++D +
Sbjct: 226 LYEVLTGEPPFTGD-------SPVSVAYQHVREDP---------IPPSARHEGLSAD--L 267
Query: 253 DTAVIFRMKQN 263
D V+ + +N
Sbjct: 268 DAVVLKALAKN 278
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 122/317 (38%), Gaps = 98/317 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 136
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFF-EEGKVYREIV 173
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ +E Y V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTADEMTGY---V 190
Query: 174 GSPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------ 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 200 -----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ- 235
++NF + F A+ A++L+ +ML D +RI AAQ
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQA 309
Query: 236 VVHPWLKESGEASDKPI 252
+ H + + + D+P+
Sbjct: 310 LAHAYFAQYHDPDDEPV 326
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 122/317 (38%), Gaps = 98/317 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 136
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFF-EEGKVYREIV 173
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ +E Y V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTADEMTGY---V 190
Query: 174 GSPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------ 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 200 -----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ- 235
++NF + F A+ A++L+ +ML D +RI AAQ
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQA 309
Query: 236 VVHPWLKESGEASDKPI 252
+ H + + + D+P+
Sbjct: 310 LAHAYFAQYHDPDDEPV 326
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 122/317 (38%), Gaps = 98/317 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 136
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFF-EEGKVYREIV 173
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ +E Y V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTADEMTGY---V 190
Query: 174 GSPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------ 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 200 -----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ- 235
++NF + F A+ A++L+ +ML D +RI AAQ
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQA 309
Query: 236 VVHPWLKESGEASDKPI 252
+ H + + + D+P+
Sbjct: 310 LAHAYFAQYHDPDDEPV 326
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACK--------------SISKRKLVKDYEKDDVRGEV 84
+++G G +G+ Y TG A K +I + L+K+ ++ +
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 85 EVM----------QYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHR 134
+V+ ++LS D G + + +++ G+ CH V+HR
Sbjct: 71 DVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLHR 129
Query: 135 DLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVLL 185
DLKP+N L + E A +K DFGL+ F + Y V + +Y APE+LL
Sbjct: 130 DLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACK--------------SISKRKLVKDYEKDDVRGEV 84
+++G G +G+ Y TG A K +I + L+K+ ++ +
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 85 EVM----------QYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHR 134
+V+ ++LS D G + + +++ G+ CH V+HR
Sbjct: 72 DVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLHR 130
Query: 135 DLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVLL 185
DLKP+N L + E A +K DFGL+ F + Y V + +Y APE+LL
Sbjct: 131 DLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKPEN L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 120 CHSHRVLHRDLKPENLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 185 L 185
L
Sbjct: 177 L 177
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKPEN L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPENLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 185 L 185
L
Sbjct: 176 L 176
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKPEN L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 121 CHSHRVLHRDLKPENLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 185 L 185
L
Sbjct: 178 L 178
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 103 ARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-V 161
G + L ++ + CH R V+HRDLKP+N L + N LK DFGL+
Sbjct: 94 CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLADFGLARA 150
Query: 162 FFEEGKVYREIVGSPYYIAPEVLL 185
F + Y V + +Y P+VL
Sbjct: 151 FGIPVRCYSAEVVTLWYRPPDVLF 174
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S +A LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPYVVTRYYRAPEVIL 198
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S +A LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPYVVTRYYRAPEVIL 198
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 121/316 (38%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK D+GL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDYGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 39 KELGRGEFGITYLCTENSTGLQFACK--------------SISKRKLVKDYEKDDVRGEV 84
+++G G +G+ Y TG A K +I + L+K+ ++ +
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 85 EVM----------QYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHR 134
+V+ ++L D G + + +++ G+ CH V+HR
Sbjct: 72 DVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA-FCHSHRVLHR 130
Query: 135 DLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVLL 185
DLKP+N L + E A +K DFGL+ F + Y V + +Y APE+LL
Sbjct: 131 DLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 68/176 (38%), Gaps = 30/176 (17%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ + + +GRG + L T +A K + K + D + D V+ E V + S P
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 95 -------------------------SILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
++F R E A + + + N H R
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL-NYLHER 140
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYREIVGSPYYIAPEVL 184
G+++RDLK +N L D +K TD+G+ G G+P YIAPE+L
Sbjct: 141 GIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 193
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAP 181
++ CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y AP
Sbjct: 116 LSFCHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 182 EVLL 185
E+LL
Sbjct: 173 EILL 176
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 68/176 (38%), Gaps = 30/176 (17%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ + + +GRG + L T +A K + K + D + D V+ E V + S P
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 95 -------------------------SILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
++F R E A + + + N H R
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL-NYLHER 125
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYREIVGSPYYIAPEVL 184
G+++RDLK +N L D +K TD+G+ G G+P YIAPE+L
Sbjct: 126 GIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 178
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 68/176 (38%), Gaps = 30/176 (17%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP 94
+ + + +GRG + L T +A K + K + D + D V+ E V + S P
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 95 -------------------------SILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCR 129
++F R E A + + + N H R
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL-NYLHER 129
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYREIVGSPYYIAPEVL 184
G+++RDLK +N L D +K TD+G+ G G+P YIAPE+L
Sbjct: 130 GIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 182
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 124 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTASTNFM 179
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 180 MTPYVVTRYYRAPEVIL 196
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 120/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TG + A K +S+
Sbjct: 9 LAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCAKLTDDHVQF 125
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 180
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 241 ELLKKISSESARNYIQSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 300 AHAYFAQYHDPDDEPV 315
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 52/191 (27%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE-----VMQYLSG- 92
LGRG FG+ + +A K I R+L ++ +V+ + +++Y +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 93 ---------QPSI----------------LFDRIVARGHYSERAAAAVLRVIMGV---VN 124
QPS L D + R ER + L + + + V
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 125 VCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREI------------ 172
H +G+MHRDLKP N FT D ++K DFGL ++ + + +
Sbjct: 133 FLHSKGLMHRDLKPSNIFFTMDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 173 -VGSPYYIAPE 182
VG+ Y++PE
Sbjct: 190 QVGTKLYMSPE 200
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 185 L 185
L
Sbjct: 176 L 176
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 185 L 185
L
Sbjct: 175 L 175
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 185 L 185
L
Sbjct: 176 L 176
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 122 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 185 L 185
L
Sbjct: 179 L 179
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 120 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 185 L 185
L
Sbjct: 177 L 177
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 185 L 185
L
Sbjct: 176 L 176
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 185 L 185
L
Sbjct: 176 L 176
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 120 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 176
Query: 185 L 185
L
Sbjct: 177 L 177
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 121 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 185 L 185
L
Sbjct: 178 L 178
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 185 L 185
L
Sbjct: 175 L 175
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 185 L 185
L
Sbjct: 176 L 176
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 185 L 185
L
Sbjct: 176 L 176
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 185 L 185
L
Sbjct: 175 L 175
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 185 L 185
L
Sbjct: 176 L 176
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 185 L 185
L
Sbjct: 176 L 176
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 185 L 185
L
Sbjct: 175 L 175
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 123 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 179
Query: 185 L 185
L
Sbjct: 180 L 180
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 185 L 185
L
Sbjct: 175 L 175
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 185 L 185
L
Sbjct: 175 L 175
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 126 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 182
Query: 185 L 185
L
Sbjct: 183 L 183
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 122 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 185 L 185
L
Sbjct: 179 L 179
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 122 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 185 L 185
L
Sbjct: 179 L 179
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 121 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 185 L 185
L
Sbjct: 178 L 178
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 120 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 185 L 185
L
Sbjct: 177 L 177
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 123 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 179
Query: 185 L 185
L
Sbjct: 180 L 180
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 36/191 (18%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
VM+Y+ G L D + G + + A V+ +N H G++HRD+KP N + ++
Sbjct: 94 VMEYVDG--VTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 146 WDENALLKATDFGLS-VFFEEGKVYRE---IVGSPYYIAPE-VLLQKMDQRVDA------ 194
+ +K DFG++ + G + ++G+ Y++PE +D R D
Sbjct: 152 TNA---VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 195 --AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPI 252
+L GE F D S + ++ + +DP + P + G ++D +
Sbjct: 209 LYEVLTGEPPFTGD-------SPDSVAYQHVREDP---------IPPSARHEGLSAD--L 250
Query: 253 DTAVIFRMKQN 263
D V+ + +N
Sbjct: 251 DAVVLKALAKN 261
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 124/340 (36%), Gaps = 97/340 (28%)
Query: 30 DVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSIS-------------KRKLVKDYE 76
DV YT +G G +G+ +N ++ A K IS + K++ +
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 77 KDDVRG--------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGV 122
+++ G +V ++ +L G +++ H S L I+
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYLVTHLMGAD---LYKLLKTQHLSNDHICYFLYQILRG 156
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVF----FEEGKVYREIVGSPYY 178
+ H V+HRDLKP N L + + LK DFGL+ + E V + +Y
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATRWY 213
Query: 179 IAPEVLLQK--MDQRVD---AAILKGEINFQRDPFP------------------------ 209
APE++L + +D + E+ R FP
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 273
Query: 210 -----SASSSAIELVHR----------------------MLTQDPKRRIIAAQ-VVHPWL 241
A + + L H+ MLT +P +RI Q + HP+L
Sbjct: 274 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
Query: 242 KESGEASDKPIDTAVIFRMKQNTAMNKLKKLALKWHSYDE 281
++ + SD+PI A K + ++ L K LK ++E
Sbjct: 334 EQYYDPSDEPIAEA---PFKFDMELDDLPKEKLKELIFEE 370
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 287 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 343
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 344 DDLPKEKLKELIFEE 358
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 279 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 335
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 336 DDLPKEKLKELIFEE 350
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH V+HRDLKP+N L + E A +K DFGL+ F + Y V + +Y APE+L
Sbjct: 126 CHSHRVLHRDLKPQNLLINT--EGA-IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 182
Query: 185 L 185
L
Sbjct: 183 L 183
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 164 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 219
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 220 MTPYVVTRYYRAPEVIL 236
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSI--- 96
E+GRG F Y + T ++ A + RKL K E+ + E E ++ L P+I
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS-ERQRFKEEAEXLKGLQ-HPNIVRF 90
Query: 97 ---------------LFDRIVARGH---YSERAAAAVLRV-------IMGVVNVCHCRG- 130
L + G Y +R ++V I+ + H R
Sbjct: 91 YDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTP 150
Query: 131 -VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMD 189
++HRDLK +N T +K D GL+ + + ++G+P + APE +K D
Sbjct: 151 PIIHRDLKCDNIFITG--PTGSVKIGDLGLATL-KRASFAKAVIGTPEFXAPEXYEEKYD 207
Query: 190 QRVDA 194
+ VD
Sbjct: 208 ESVDV 212
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 277 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 333
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 334 DDLPKEKLKELIFEE 348
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 120/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TG + A K +S+
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 125
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMA--GFVA 180
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 241 ELLKKISSESARNYIQSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 300 AHAYFAQYHDPDDEPV 315
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 283 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 339
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 340 DDLPKEKLKELIFEE 354
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 277 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 333
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 334 DDLPKEKLKELIFEE 348
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 120/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TG + A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMA--GFVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 283 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 339
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 340 DDLPKEKLKELIFEE 354
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 284 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 340
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 341 DDLPKEKLKELIFEE 355
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 120/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TG + A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMA--GFVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 279 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 335
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 336 DDLPKEKLKELIFEE 350
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 283 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 339
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 340 DDLPKEKLKELIFEE 354
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 279 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 335
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 336 DDLPKEKLKELIFEE 350
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 284 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 340
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 341 DDLPKEKLKELIFEE 355
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 285 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 341
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 342 DDLPKEKLKELIFEE 356
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 276 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 332
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 333 DDLPKEKLKELIFEE 347
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 283 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 339
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 340 DDLPKEKLKELIFEE 354
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 283 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 339
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 340 DDLPKEKLKELIFEE 354
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 127 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 182
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 183 MTPYVVTRYYRAPEVIL 199
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 283 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 339
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 340 DDLPKEKLKELIFEE 354
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 279 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 335
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 336 DDLPKEKLKELIFEE 350
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPYVVTRYYRAPEVIL 198
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 281 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 337
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 338 DDLPKEKLKELIFEE 352
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 299 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 355
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 356 DDLPKEKLKELIFEE 370
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPYVVTRYYRAPEVIL 198
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLXGIKHL-HSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPYVVTRYYRAPEVIL 198
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 131 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 186
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 187 MTPYVVTRYYRAPEVIL 203
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPYVVTRYYRAPEVIL 198
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 128 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 183
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 184 MVPFVVTRYYRAPEVIL 200
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 125 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 180
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 181 MTPYVVTRYYRAPEVIL 197
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPYVVTRYYRAPEVIL 198
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 115/318 (36%), Gaps = 93/318 (29%)
Query: 30 DVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSI---------SKR-----KLVKDY 75
DV Y I + +G G +G+ TG Q A K I +KR K++K +
Sbjct: 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF 110
Query: 76 EKDDV------------RGEVE-VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGV 122
+ D++ GE + V L S L I + + L ++
Sbjct: 111 KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRG 170
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFF-----EEGKVYREIVGSPY 177
+ H V+HRDLKP N L +EN LK DFG++ E E V + +
Sbjct: 171 LKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 178 YIAPEVL--LQKMDQRVD---AAILKGEINFQRDPF------------------------ 208
Y APE++ L + Q +D + GE+ +R F
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287
Query: 209 ---------------------------PSASSSAIELVHRMLTQDPKRRIIAAQVV-HPW 240
P A A+ L+ RML +P RI AA + HP+
Sbjct: 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 347
Query: 241 LKESGEASDKPIDTAVIF 258
L + + D+P D A F
Sbjct: 348 LAKYHDPDDEP-DCAPPF 364
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L++ + SD+PI A K + +
Sbjct: 279 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA---PFKFDMEL 335
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 336 DDLPKEKLKELIFEE 350
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLXGIKHL-HSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPYVVTRYYRAPEVIL 198
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPYVVTRYYRAPEVIL 198
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 164 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 219
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 220 MTPYVVTRYYRAPEVIL 236
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 127 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 182
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 183 MTPYVVTRYYRAPEVIL 199
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 119 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 174
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 175 MTPYVVTRYYRAPEVIL 191
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 103 ARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-V 161
G + L ++ + CH R V+HRDLKP+N L + N LK +FGL+
Sbjct: 94 CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARA 150
Query: 162 FFEEGKVYREIVGSPYYIAPEVLL 185
F + Y V + +Y P+VL
Sbjct: 151 FGIPVRCYSAEVVTLWYRPPDVLF 174
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 120 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 175
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 176 MTPYVVTRYYRAPEVIL 192
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 120 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 175
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 176 MTPYVVTRYYRAPEVIL 192
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 127 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 182
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 183 MTPYVVTRYYRAPEVIL 199
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 73/215 (33%)
Query: 107 YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG 166
+SE ++ ++ + H GV+HRDLKP N + +E+ LK DFGL+ +
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKILDFGLARHADA- 196
Query: 167 KVYREIVG---SPYYIAPEVLLQKM--DQRVD--------AAILKGEINFQ--------- 204
E+ G + +Y APEV+L M +Q VD A +L G+ F+
Sbjct: 197 ----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 252
Query: 205 ------------------------------RDP-------FPSASSSAIELVHRMLTQDP 227
+ P FP AS A +L+ +ML D
Sbjct: 253 QILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDV 312
Query: 228 KRRIIAAQ-VVHPWLK-----ESGEASDKPIDTAV 256
+R+ AAQ + HP+ + E + +P D ++
Sbjct: 313 DKRLTAAQALTHPFFEPFRDPEEETEAQQPFDDSL 347
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 120 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 175
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 176 MTPYVVTRYYRAPEVIL 192
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 73/215 (33%)
Query: 107 YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG 166
+SE ++ ++ + H GV+HRDLKP N + +E+ LK DFGL+ +
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKILDFGLARHADA- 178
Query: 167 KVYREIVG---SPYYIAPEVLLQKM--DQRVD--------AAILKGEINFQ--------- 204
E+ G + +Y APEV+L M +Q VD A +L G+ F+
Sbjct: 179 ----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 234
Query: 205 ------------------------------RDP-------FPSASSSAIELVHRMLTQDP 227
+ P FP AS A +L+ +ML D
Sbjct: 235 QILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDV 294
Query: 228 KRRIIAAQ-VVHPWLK-----ESGEASDKPIDTAV 256
+R+ AAQ + HP+ + E + +P D ++
Sbjct: 295 DKRLTAAQALTHPFFEPFRDPEEETEAQQPFDDSL 329
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 65/170 (38%), Gaps = 30/170 (17%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQP------ 94
+GRG + L T +A + + K + D + D V+ E V + S P
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 95 -------------------SILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRD 135
++F R E A + + + N H RG+++RD
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL-NYLHERGIIYRD 178
Query: 136 LKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYREIVGSPYYIAPEVL 184
LK +N L D +K TD+G+ G G+P YIAPE+L
Sbjct: 179 LKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL 225
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 119 ERMSYLLYQMLXGIKHL-HSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFM 174
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 175 MTPYVVTRYYRAPEVIL 191
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 120/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TG + A K +S+
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 125
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 180
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 241 ELLKKISSESARNYIQSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 300 AHAYFAQYHDPDDEPV 315
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 117 RVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGS 175
+++ GV + CH ++HRDLKP+N L S + LK DFGL+ F + Y V +
Sbjct: 127 QLLRGVAH-CHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVVT 182
Query: 176 PYYIAPEVLL 185
+Y AP+VL+
Sbjct: 183 LWYRAPDVLM 192
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 120/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TG + A K +S+
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 135
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 190
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 251 ELLKKISSESARNYIQSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 120/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TG + A K +S+
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 149
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 204
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 264
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 265 ELLKKISSESARNYIQSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 324 AHAYFAQYHDPDDEPV 339
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 120/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TG + A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPYVVTRYYRAPEVIL 198
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPYVVTRYYRAPEVIL 198
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 117 RVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGS 175
+++ GV + CH ++HRDLKP+N L S + LK DFGL+ F + Y V +
Sbjct: 127 QLLRGVAH-CHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVVT 182
Query: 176 PYYIAPEVLL 185
+Y AP+VL+
Sbjct: 183 LWYRAPDVLM 192
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 120/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TG + A K +S+
Sbjct: 32 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 91
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 92 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 148
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 203
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 263
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 264 ELLKKISSESARNYIQSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 322
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 323 AHAYFAQYHDPDDEPV 338
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPYVVTRYYRAPEVIL 198
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 119/320 (37%), Gaps = 97/320 (30%)
Query: 30 DVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSI---------SKR-----KLVKDY 75
DV Y I + +G G +G+ TG Q A K I +KR K++K +
Sbjct: 52 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF 111
Query: 76 EKDDV-------RGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAV--------LRVIM 120
+ D++ R V ++ S ++ D + + H ++ + L ++
Sbjct: 112 KHDNIIAIKDILRPTVPYGEFKSVY--VVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLL 169
Query: 121 GVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFF-----EEGKVYREIVGS 175
+ H V+HRDLKP N L +EN LK DFG++ E E V +
Sbjct: 170 RGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 176 PYYIAPEVL--LQKMDQRVD---AAILKGEINFQRDPFP--------------------- 209
+Y APE++ L + Q +D + GE+ +R FP
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 286
Query: 210 ------------------------------SASSSAIELVHRMLTQDPKRRIIAAQVV-H 238
A A+ L+ RML +P RI AA + H
Sbjct: 287 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 346
Query: 239 PWLKESGEASDKPIDTAVIF 258
P+L + + D+P D A F
Sbjct: 347 PFLAKYHDPDDEP-DCAPPF 365
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 73/197 (37%), Gaps = 51/197 (25%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYL-SGQ 93
Y I LG G FG C ++ G + I K D + R E++V+++L +
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTD 72
Query: 94 PSILFDRIVARGHYSERAAAAVLRVIMGV-----------------------------VN 124
P+ F + + ++ ++G+ VN
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 125 VCHCRGVMHRDLKPENFLFTSWDE----------------NALLKATDFGLSVFFEEGKV 168
H + H DLKPEN LF D N +K DFG + + +E
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-- 190
Query: 169 YREIVGSPYYIAPEVLL 185
+ +V + +Y APEV+L
Sbjct: 191 HSTLVSTRHYRAPEVIL 207
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 120/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK FGL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILGFGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MEPEVVTRYYRAPEVIL 198
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L + + SD+PI A K + +
Sbjct: 281 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEPIAEA---PFKFDMEL 337
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 338 DDLPKEKLKELIFEE 352
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPIDTAVIFRMKQNTAM 266
FP+A S A++L+ +MLT +P +RI Q + HP+L + + SD+PI A K + +
Sbjct: 281 FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDEPIAEA---PFKFDMEL 337
Query: 267 NKLKKLALKWHSYDE 281
+ L K LK ++E
Sbjct: 338 DDLPKEKLKELIFEE 352
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 120/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TG + A K +S+
Sbjct: 23 LNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 82
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 83 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 139
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 140 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 194
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 195 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 254
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 255 ELLKKISSESARNYIQSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 313
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 314 AHAYFAQYHDPDDEPV 329
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 120/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TG + A K +S+
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 149
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDE--MXGXVA 204
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 264
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 265 ELLKKISSESARNYIQSLAQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 324 AHAYFAQYHDPDDEPV 339
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MEPEVVTRYYRAPEVIL 198
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 30/169 (17%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ----------- 88
ELG G G+ + + +GL A K I +K ++ + E++V+
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFY 73
Query: 89 ---YLSGQPSIL--------FDRIVAR-GHYSERAAAAV-LRVIMGVVNVCHCRGVMHRD 135
Y G+ SI D+++ + G E+ V + VI G+ + +MHRD
Sbjct: 74 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 133
Query: 136 LKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
+KP N L S E +K DFG+S + ++ E VG+ Y++PE L
Sbjct: 134 VKPSNILVNSRGE---IKLCDFGVSGQLID-EMANEFVGTRSYMSPERL 178
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 117/314 (37%), Gaps = 94/314 (29%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + +GL+ A K +S+
Sbjct: 42 LNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYREL 101
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 102 RLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 158
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DFGL+ ++ V
Sbjct: 159 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTDDEMT--GYVA 213
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKGEINFQ-------------------- 204
+ +Y APE++L M + VD A +L G F
Sbjct: 214 TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPA 273
Query: 205 --------------------------RDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-VV 237
D F A+ A++L+ +ML D +RI A++ +
Sbjct: 274 SVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALA 333
Query: 238 HPWLKESGEASDKP 251
HP+ + + D+P
Sbjct: 334 HPYFSQYHDPDDEP 347
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
ER + + +++ G+ ++ H G++HRDLKP N + S + LK DFGL+ +
Sbjct: 126 ERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 169 YREIVGSPYYIAPEVLL 185
V + YY APEV+L
Sbjct: 182 MTPEVVTRYYRAPEVIL 198
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 120/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK D GL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDAGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 120/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK D GL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDGGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 120/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TGL+ A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK D GL+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDRGLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 73/185 (39%), Gaps = 52/185 (28%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVE--------------- 85
LG+G FG L TG +A K + K +++D DDV +
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD---DDVECTMTEKRILSLARNHPFLT 87
Query: 86 --------------VMQYLSG-------QPSILFDRIVARGHYSERAAAAVLRVIMGVVN 124
VM++++G Q S FD AR + +E I+ +
Sbjct: 88 QLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAE---------IISALM 138
Query: 125 VCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPYYIAPEV 183
H +G+++RDLK +N L D K DFG+ G G+P YIAPE+
Sbjct: 139 FLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEI 195
Query: 184 LLQKM 188
L + +
Sbjct: 196 LQEML 200
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 32/167 (19%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACK-SISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
Y +G+++G G FG YL T+ + G + A K K K + + + + ++MQ G
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKI---YKMMQGGVGI 67
Query: 94 PSILFDRIVARGHYSERAAAAVLRVIMGVVNVC-----------------------HCRG 130
P+I + A G Y+ + + + N C H +
Sbjct: 68 PTIRW--CGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 125
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY 177
+HRD+KP+NFL + L+ DFGL+ + + + ++ I PY
Sbjct: 126 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI---PY 169
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 55/256 (21%)
Query: 32 ELHYTIGK-ELGRGEFGITYLCTENSTGLQ----------------FACKSISKRKLVKD 74
E+H+ + LGRG FG + + TG Q AC ++ ++V
Sbjct: 72 EVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPL 131
Query: 75 YEKDDVRGEVEV-MQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
Y V + M+ L G L + +G E A L + + H R ++H
Sbjct: 132 YGAVREGPWVNIFMELLEG--GSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH 189
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIV------GSPYYIAPEVLL-Q 186
D+K +N L +S +A L DFG +V + + ++++ G+ ++APEV+L +
Sbjct: 190 GDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGR 247
Query: 187 KMDQRVDA--------AILKG---EINFQRDPF---------------PSASSSAIELVH 220
D +VD +L G F R P PS + + +
Sbjct: 248 SCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQ 307
Query: 221 RMLTQDPKRRIIAAQV 236
L ++P R+ AA++
Sbjct: 308 EGLRKEPIHRVSAAEL 323
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 32/167 (19%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACK-SISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
Y +G+++G G FG YL T+ + G + A K K K + + + + ++MQ G
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKI---YKMMQGGVGI 65
Query: 94 PSILFDRIVARGHYSERAAAAVLRVIMGVVNVC-----------------------HCRG 130
P+I + A G Y+ + + + N C H +
Sbjct: 66 PTIRW--CGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 123
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY 177
+HRD+KP+NFL + L+ DFGL+ + + + ++ I PY
Sbjct: 124 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI---PY 167
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 36/209 (17%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ----------- 88
ELG G G+ + + +GL A K I +K ++ + E++V+
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFY 132
Query: 89 ---YLSGQPSIL--------FDRIVAR-GHYSERAAAAV-LRVIMGVVNVCHCRGVMHRD 135
Y G+ SI D+++ + G E+ V + VI G+ + +MHRD
Sbjct: 133 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 192
Query: 136 LKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQRVDAA 195
+KP N L S E +K DFG+S + + VG+ Y++PE LQ V +
Sbjct: 193 VKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPE-RLQGTHYSVQSD 247
Query: 196 ILKG-----EINFQRDPFPSASSSAIELV 219
I E+ R P P + +EL+
Sbjct: 248 IWSMGLSLVEMAVGRYPIPPPDAKELELM 276
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 94/241 (39%), Gaps = 54/241 (22%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSIL--- 97
LG+G FG L T +A K + K +++D + + E V+ L G+P L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLA-LPGKPPFLTQL 86
Query: 98 ------FDR----------------IVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRD 135
DR I G + E A I + +G+++RD
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 146
Query: 136 LKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPYYIAPEVL-LQKMDQRVD 193
LK +N + D +K DFG+ +G + G+P YIAPE++ Q + VD
Sbjct: 147 LKLDNVML---DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVD 203
Query: 194 --------AAILKGEINFQRD--------------PFP-SASSSAIELVHRMLTQDPKRR 230
+L G+ F+ + +P S S A+ + ++T+ P +R
Sbjct: 204 WWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKR 263
Query: 231 I 231
+
Sbjct: 264 L 264
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 36/209 (17%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ----------- 88
ELG G G+ + + +GL A K I +K ++ + E++V+
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFY 97
Query: 89 ---YLSGQPSIL--------FDRIVAR-GHYSERAAAAV-LRVIMGVVNVCHCRGVMHRD 135
Y G+ SI D+++ + G E+ V + VI G+ + +MHRD
Sbjct: 98 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 157
Query: 136 LKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQRVDAA 195
+KP N L S E +K DFG+S + + VG+ Y++PE LQ V +
Sbjct: 158 VKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPE-RLQGTHYSVQSD 212
Query: 196 ILKG-----EINFQRDPFPSASSSAIELV 219
I E+ R P P + +EL+
Sbjct: 213 IWSMGLSLVEMAVGRYPIPPPDAKELELM 241
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 36/209 (17%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ----------- 88
ELG G G+ + + +GL A K I +K ++ + E++V+
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 89 ---YLSGQPSIL--------FDRIVAR-GHYSERAAAAV-LRVIMGVVNVCHCRGVMHRD 135
Y G+ SI D+++ + G E+ V + VI G+ + +MHRD
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 136 LKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQRVDAA 195
+KP N L S E +K DFG+S + + VG+ Y++PE LQ V +
Sbjct: 131 VKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPE-RLQGTHYSVQSD 185
Query: 196 ILKG-----EINFQRDPFPSASSSAIELV 219
I E+ R P P + +EL+
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 94/241 (39%), Gaps = 54/241 (22%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSIL--- 97
LG+G FG L T +A K + K +++D + + E V+ L G+P L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLA-LPGKPPFLTQL 407
Query: 98 ------FDR----------------IVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRD 135
DR I G + E A I + +G+++RD
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 467
Query: 136 LKPENFLFTSWDENALLKATDFGLSV-FFEEGKVYREIVGSPYYIAPEVL-LQKMDQRVD 193
LK +N + D +K DFG+ +G + G+P YIAPE++ Q + VD
Sbjct: 468 LKLDNVML---DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVD 524
Query: 194 --------AAILKGEINFQRD--------------PFP-SASSSAIELVHRMLTQDPKRR 230
+L G+ F+ + +P S S A+ + ++T+ P +R
Sbjct: 525 WWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKR 584
Query: 231 I 231
+
Sbjct: 585 L 585
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 39/197 (19%)
Query: 31 VELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYL 90
V +HY +G+ +G G FG+ + T Q A K +R + +R E + L
Sbjct: 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLL 62
Query: 91 ---SGQPSILF--------------------DRIVARGH-YSERAAAAVLRVIMGVVNVC 126
+G P++ + D + G +S + A + ++ V
Sbjct: 63 AGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI 122
Query: 127 HCRGVMHRDLKPENFLFTSWD-ENA-LLKATDFGLSVFFEEGKV-----YRE---IVGSP 176
H + +++RD+KP+NFL + +NA ++ DFG+ F+ + YRE + G+
Sbjct: 123 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTA 182
Query: 177 YYIAPEVLLQKMDQRVD 193
Y++ L + R D
Sbjct: 183 RYMSINTHLGREQSRRD 199
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 39/197 (19%)
Query: 31 VELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYL 90
V +HY +G+ +G G FG+ + T Q A K +R + +R E + L
Sbjct: 7 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLL 61
Query: 91 ---SGQPSILF--------------------DRIVARGH-YSERAAAAVLRVIMGVVNVC 126
+G P++ + D + G +S + A + ++ V
Sbjct: 62 AGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI 121
Query: 127 HCRGVMHRDLKPENFLFTSWD-ENA-LLKATDFGLSVFFEEGKV-----YRE---IVGSP 176
H + +++RD+KP+NFL + +NA ++ DFG+ F+ + YRE + G+
Sbjct: 122 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTA 181
Query: 177 YYIAPEVLLQKMDQRVD 193
Y++ L + R D
Sbjct: 182 RYMSINTHLGREQSRRD 198
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFE-EGKVYREIVGSPYYIAPEVL 184
CH + V+HRDLKP+N L +E LK DFGL+ K Y V + +Y P++L
Sbjct: 116 CHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDIL 172
Query: 185 LQKMD 189
L D
Sbjct: 173 LGSTD 177
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 72/197 (36%), Gaps = 51/197 (25%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYL-SGQ 93
Y I LG G FG C ++ G + I K D + R E++V+++L +
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTD 72
Query: 94 PSILFDRIVARGHYSERAAAAVLRVIMGV-----------------------------VN 124
P+ F + + ++ ++G+ VN
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 125 VCHCRGVMHRDLKPENFLFTSWDE----------------NALLKATDFGLSVFFEEGKV 168
H + H DLKPEN LF D N +K DFG + + +E
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-- 190
Query: 169 YREIVGSPYYIAPEVLL 185
+ +V +Y APEV+L
Sbjct: 191 HSTLVXXRHYRAPEVIL 207
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 36/209 (17%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ----------- 88
ELG G G+ + + +GL A K I +K ++ + E++V+
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 89 ---YLSGQPSIL--------FDRIVAR-GHYSERAAAAV-LRVIMGVVNVCHCRGVMHRD 135
Y G+ SI D+++ + G E+ V + VI G+ + +MHRD
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 136 LKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQRVDAA 195
+KP N L S E +K DFG+S + + VG+ Y++PE LQ V +
Sbjct: 131 VKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPE-RLQGTHYSVQSD 185
Query: 196 ILKG-----EINFQRDPFPSASSSAIELV 219
I E+ R P P + +EL+
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 36/209 (17%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ----------- 88
ELG G G+ + + +GL A K I +K ++ + E++V+
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 89 ---YLSGQPSIL--------FDRIVAR-GHYSERAAAAV-LRVIMGVVNVCHCRGVMHRD 135
Y G+ SI D+++ + G E+ V + VI G+ + +MHRD
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 136 LKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQRVDAA 195
+KP N L S E +K DFG+S + + VG+ Y++PE LQ V +
Sbjct: 131 VKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPE-RLQGTHYSVQSD 185
Query: 196 ILKG-----EINFQRDPFPSASSSAIELV 219
I E+ R P P + +EL+
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 36/209 (17%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ----------- 88
ELG G G+ + + +GL A K I +K ++ + E++V+
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 89 ---YLSGQPSIL--------FDRIVAR-GHYSERAAAAV-LRVIMGVVNVCHCRGVMHRD 135
Y G+ SI D+++ + G E+ V + VI G+ + +MHRD
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 136 LKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQRVDAA 195
+KP N L S E +K DFG+S + + VG+ Y++PE LQ V +
Sbjct: 131 VKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPE-RLQGTHYSVQSD 185
Query: 196 ILKG-----EINFQRDPFPSASSSAIELV 219
I E+ R P P + +EL+
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 100/256 (39%), Gaps = 55/256 (21%)
Query: 32 ELHYTIGK-ELGRGEFGITYLCTENSTGLQ----------------FACKSISKRKLVKD 74
E+H+ + LGRG FG + + TG Q AC ++ ++V
Sbjct: 91 EVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPL 150
Query: 75 YEKDDVRGEVEV-MQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
Y V + M+ L G L + +G E A L + + H R ++H
Sbjct: 151 YGAVREGPWVNIFMELLEG--GSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH 208
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYRE------IVGSPYYIAPEVLL-Q 186
D+K +N L +S +A L DFG +V + + + I G+ ++APEV+L +
Sbjct: 209 GDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGR 266
Query: 187 KMDQRVDA--------AILKG---EINFQRDPF---------------PSASSSAIELVH 220
D +VD +L G F R P PS + + +
Sbjct: 267 SCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQ 326
Query: 221 RMLTQDPKRRIIAAQV 236
L ++P R+ AA++
Sbjct: 327 EGLRKEPIHRVSAAEL 342
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 62/182 (34%)
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G++HRDLKP N + +E++ L+ DFGL+ +E V + +Y APE++L
Sbjct: 148 HSAGIIHRDLKPSN---VAVNEDSELRILDFGLARQADEEMT--GYVATRWYRAPEIMLN 202
Query: 187 KM--DQRVD--------AAILKGEINF--------------------------------- 203
M +Q VD A +L+G+ F
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHAR 262
Query: 204 ----------QRD---PFPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASD 249
Q+D F A+ AI+L+ RML D +R+ AA+ + H + + + D
Sbjct: 263 TYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPED 322
Query: 250 KP 251
+P
Sbjct: 323 EP 324
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 38/221 (17%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ----------- 88
ELG G G+ + + +GL A K I +K ++ + E++V+
Sbjct: 32 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFY 89
Query: 89 ---YLSGQPSIL--------FDRIVAR-GHYSERAAAAV-LRVIMGVVNVCHCRGVMHRD 135
Y G+ SI D+++ + G E+ V + VI G+ + +MHRD
Sbjct: 90 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 149
Query: 136 LKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQRVDAA 195
+KP N L S E +K DFG+S + + VG+ Y++PE LQ V +
Sbjct: 150 VKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPE-RLQGTHYSVQSD 204
Query: 196 ILKG-----EINFQRDPFPSASSSA--IELVHRMLTQDPKR 229
I E+ R P S S S EL+ ++ + P +
Sbjct: 205 IWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPK 245
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 62/183 (33%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLL 185
H G++HRDLKP N + +E++ L+ DFGL+ +E V + +Y APE++L
Sbjct: 147 IHSAGIIHRDLKPSN---VAVNEDSELRILDFGLARQADEEMT--GYVATRWYRAPEIML 201
Query: 186 QKM--DQRVD--------AAILKGEINF-------------------------------- 203
M +Q VD A +L+G+ F
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHA 261
Query: 204 -----------QRD---PFPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEAS 248
Q+D F A+ AI+L+ RML D +R+ AA+ + H + + +
Sbjct: 262 RTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPE 321
Query: 249 DKP 251
D+P
Sbjct: 322 DEP 324
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 19/102 (18%)
Query: 97 LFDRIVARGHYSERAAAAVLRVIMGV---VNVCHCRGVMHRDLKPENFLFTSWDENALLK 153
L D + R +R L + + + V H +G+MHRDLKP N FT D ++K
Sbjct: 148 LKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDD---VVK 204
Query: 154 ATDFGLSVFFEEGKVYREI-------------VGSPYYIAPE 182
DFGL ++ + + + VG+ Y++PE
Sbjct: 205 VGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPE 246
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 62/182 (34%)
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G++HRDLKP N + +E+ L+ DFGL+ +E V + +Y APE++L
Sbjct: 140 HSAGIIHRDLKPSN---VAVNEDCELRILDFGLARQADEEMT--GYVATRWYRAPEIMLN 194
Query: 187 KM--DQRVD--------AAILKGEINF--------------------------------- 203
M +Q VD A +L+G+ F
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHAR 254
Query: 204 ----------QRD---PFPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASD 249
Q+D F A+ AI+L+ RML D +R+ AA+ + H + + + D
Sbjct: 255 TYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPED 314
Query: 250 KP 251
+P
Sbjct: 315 EP 316
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 30/169 (17%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ----------- 88
ELG G G+ + + +GL A K I +K ++ + E++V+
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 89 ---YLSGQPSIL--------FDRIVAR-GHYSERAAAAV-LRVIMGVVNVCHCRGVMHRD 135
Y G+ SI D+++ + G E+ V + VI G+ + +MHRD
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRD 130
Query: 136 LKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
+KP N L S E +K DFG+S + + VG+ Y++PE L
Sbjct: 131 VKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMSPERL 175
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASDKPI 252
FP + S A++L+ RMLT +P +RI + + HP+L++ + +D+P+
Sbjct: 299 FPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPV 344
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLF-TSWDENALLKATDFGLSVF----FEEGKVYREIV 173
I+ + H V+HRDLKP N L T+ D LK DFGL+ + E V
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLINTTCD----LKICDFGLARIADPEHDHTGFLTEXV 208
Query: 174 GSPYYIAPEVLLQ 186
+ +Y APE++L
Sbjct: 209 ATRWYRAPEIMLN 221
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPE 182
GV+HRD+KP N L DE +K DFG+S + K G Y+APE
Sbjct: 145 GVIHRDVKPSNILL---DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPE 194
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 29/187 (15%)
Query: 32 ELHY-TIGKELGRGEFGITYLCTENSTGLQ----------------FACKSISKRKLVKD 74
E+H+ T LGRG FG + + TG Q AC +S ++V
Sbjct: 70 EVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPL 129
Query: 75 YEKDDVRGEVEV-MQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
Y V + M+ L G L I G E A L + + H R ++H
Sbjct: 130 YGAVREGPWVNIFMELLEG--GSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 187
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIV------GSPYYIAPEVLLQK 187
D+K +N L +S A L DFG ++ + + + ++ G+ ++APEV++ K
Sbjct: 188 GDVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 245
Query: 188 -MDQRVD 193
D +VD
Sbjct: 246 PCDAKVD 252
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ H ++H DLKPEN L + +K DFG S +E +VY I S +Y
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSC-YEHQRVYXXI-QSRFY 265
Query: 179 IAPEVLL 185
APEV+L
Sbjct: 266 RAPEVIL 272
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 32/167 (19%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACK-SISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
Y +G+++G G FG YL ++G + A K K K + + + ++MQ G
Sbjct: 11 YRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKF---YKMMQGGVGI 67
Query: 94 PSILFDRIVARGHYSERAAAAVLRVIMGVVNVC-----------------------HCRG 130
PSI + A G Y+ + + + N C H +
Sbjct: 68 PSIKW--CGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 125
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY 177
+HRD+KP+NFL + L+ DFGL+ + + + ++ I PY
Sbjct: 126 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI---PY 169
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ H ++H DLKPEN L + +K DFG S +E +VY I S +Y
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSC-YEHQRVYTXI-QSRFY 265
Query: 179 IAPEVLL 185
APEV+L
Sbjct: 266 RAPEVIL 272
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
I+ ++ H ++H DLKPEN L + +K DFG S +E +VY I S +Y
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSC-YEHQRVYTXI-QSRFY 265
Query: 179 IAPEVLL 185
APEV+L
Sbjct: 266 RAPEVIL 272
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 119/316 (37%), Gaps = 96/316 (30%)
Query: 24 LGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKR-------------- 69
L +T +V Y +G G +G + TG + A K +S+
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 70 KLVKDYEKDDVRG---------------EVEVMQYLSGQPSILFDRIVARGHYSERAAAA 114
+L+K + ++V G +V ++ +L G + IV ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD---LNNIVKCQKLTDDHVQF 129
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVG 174
++ I+ + H ++HRDLKP N + +E+ LK DF L+ ++ V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFYLARHTDDEMT--GYVA 184
Query: 175 SPYYIAPEVLLQKM--DQRVD--------AAILKG------------------------- 199
+ +Y APE++L M +Q VD A +L G
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 200 ----------------------EINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQ-V 236
++NF + F A+ A++L+ +ML D +RI AAQ +
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 237 VHPWLKESGEASDKPI 252
H + + + D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 35/212 (16%)
Query: 64 KSISKRKLVKDY---EKDDVRGEVEVMQYLS-GQPSILFDRIVARGHYSERAAAAVLRVI 119
K ++ + +VK + E+ R +V +M++ G + + E VLR +
Sbjct: 62 KKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121
Query: 120 MGVVNVCHCRGVMHRDLKPENFL-FTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
+G +N G++HR++KP N + D ++ K TDFG + E+ + + + G+ Y
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEY 181
Query: 179 IAPEV----LLQKMDQRVDAAIL-------------KGEINFQRDPFPSASSSAIELVHR 221
+ P++ +L+K Q+ A + G + F+ PF + E++++
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR--PFEGPRRNK-EVMYK 238
Query: 222 MLTQDPKRRIIAAQVVHPWLKESGEASDKPID 253
++T P I Q +A + PID
Sbjct: 239 IITGKPSGAISGVQ----------KAENGPID 260
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 278 SYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
++DEL++G ++GS L K M AADID +GTIDY E
Sbjct: 41 TFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF 81
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 126 CHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS-VFFEEGKVYREIVGSPYYIAPEVL 184
CH ++HRDLKP+N L ++ LK DFGL+ F + V + +Y AP+VL
Sbjct: 124 CHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVL 180
Query: 185 L 185
+
Sbjct: 181 M 181
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 35/212 (16%)
Query: 64 KSISKRKLVKDY---EKDDVRGEVEVMQYLS-GQPSILFDRIVARGHYSERAAAAVLRVI 119
K ++ + +VK + E+ R +V +M++ G + + E VLR +
Sbjct: 62 KKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121
Query: 120 MGVVNVCHCRGVMHRDLKPENFL-FTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYY 178
+G +N G++HR++KP N + D ++ K TDFG + E+ + + + G+ Y
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEY 181
Query: 179 IAPEV----LLQKMDQRVDAAIL-------------KGEINFQRDPFPSASSSAIELVHR 221
+ P++ +L+K Q+ A + G + F+ PF + E++++
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR--PFEGPRRNK-EVMYK 238
Query: 222 MLTQDPKRRIIAAQVVHPWLKESGEASDKPID 253
++T P I Q +A + PID
Sbjct: 239 IITGKPSGAISGVQ----------KAENGPID 260
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 278 SYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
++DEL++G ++GS L K M AADID +GTIDY E
Sbjct: 28 TFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF 68
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWD----------ENALLKATDFG 158
E ++LR I V H ++HRDLKP+N L ++ EN + +DFG
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 159 LSVFFEEGK-VYREIVGSPY----YIAPEVLLQKMDQRVDAAI-------------LKG- 199
L + G+ +R + +P + APE+L + +R+ +I KG
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
Query: 200 ---------EINFQRDPFP----------SASSSAIELVHRMLTQDPKRRIIAAQVV-HP 239
E N R F S + A +L+ +M+ DP +R A +V+ HP
Sbjct: 252 HPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
Query: 240 --WLK 242
W K
Sbjct: 312 LFWPK 316
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 51/185 (27%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWD----------ENALLKATDFG 158
E ++LR I V H ++HRDLKP+N L ++ EN + +DFG
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 159 LSVFFEEGK-VYREIVGSPY----YIAPEVLLQKMDQRVDAAI-------------LKG- 199
L + G+ +R + +P + APE+L + +R+ +I KG
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
Query: 200 ---------EINFQRDPFP----------SASSSAIELVHRMLTQDPKRRIIAAQVV-HP 239
E N R F S + A +L+ +M+ DP +R A +V+ HP
Sbjct: 252 HPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
Query: 240 --WLK 242
W K
Sbjct: 312 LFWPK 316
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 85/210 (40%), Gaps = 38/210 (18%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQ----------- 88
ELG G G+ +GL A K I +K ++ + E++V+
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFY 80
Query: 89 ---YLSGQPSILFDRIVARGHYSE--RAAAAVLRVIMGVVNVCHCRG---------VMHR 134
Y G+ SI + + G + + A + I+G V++ RG +MHR
Sbjct: 81 GAFYSDGEISICMEHMDG-GSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHR 139
Query: 135 DLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQRVDA 194
D+KP N L S E +K DFG+S + + VG+ Y+APE LQ V +
Sbjct: 140 DVKPSNILVNSRGE---IKLCDFGVSGQLID-SMANSFVGTRSYMAPE-RLQGTHYSVQS 194
Query: 195 AILKG-----EINFQRDPFPSASSSAIELV 219
I E+ R P P + +E +
Sbjct: 195 DIWSMGLSLVELAVGRYPIPPPDAKELEAI 224
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 29/187 (15%)
Query: 32 ELHY-TIGKELGRGEFGITYLCTENSTGLQ----------------FACKSISKRKLVKD 74
E+H+ T +GRG FG + + TG Q AC +S ++V
Sbjct: 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPL 115
Query: 75 YEKDDVRGEVEV-MQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
Y V + M+ L G L I G E A L + + H R ++H
Sbjct: 116 YGAVREGPWVNIFMELLEG--GSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 173
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIV------GSPYYIAPEVLLQK 187
D+K +N L +S A L DFG ++ + + + ++ G+ ++APEV++ K
Sbjct: 174 GDVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 188 -MDQRVD 193
D +VD
Sbjct: 232 PCDAKVD 238
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPE 182
V H G+ HRD+KP+N L S D LK DFG + + + S +Y APE
Sbjct: 154 VGFIHSLGICHRDIKPQNLLVNSKDNT--LKLCDFGSAKKLIPSEPSVAXICSRFYRAPE 211
Query: 183 VLL 185
++L
Sbjct: 212 LML 214
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 29/187 (15%)
Query: 32 ELHY-TIGKELGRGEFGITYLCTENSTGLQ----------------FACKSISKRKLVKD 74
E+H+ T +GRG FG + + TG Q AC +S ++V
Sbjct: 72 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPL 131
Query: 75 YEKDDVRGEVEV-MQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMH 133
Y V + M+ L G L I G E A L + + H R ++H
Sbjct: 132 YGAVREGPWVNIFMELLEG--GSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 189
Query: 134 RDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIV------GSPYYIAPEVLLQK 187
D+K +N L +S A L DFG ++ + + + ++ G+ ++APEV++ K
Sbjct: 190 GDVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 188 -MDQRVD 193
D +VD
Sbjct: 248 PCDAKVD 254
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 29/153 (18%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISK------------------RKLVKDY 75
+Y I +GRG +G YL + +T A K +++ +L DY
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 76 E--------KDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCH 127
DD+ E+ L S L +E +L ++ N H
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH 146
Query: 128 CRGVMHRDLKPENFLFTSWDENALLKATDFGLS 160
G++HRDLKP N L +++ +K DFGL+
Sbjct: 147 ESGIIHRDLKPANCLL---NQDCSVKVCDFGLA 176
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 208 FPSASSSAIELVHRMLTQDPKRRIIAAQVV-HPWLKE 243
+PS S I L+ ML +P +RI Q + HP+LK+
Sbjct: 331 YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYREIVGS 175
++ V+ H G++H DLKP NFL + +LK DFG++ + V VG+
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGT 219
Query: 176 PYYIAPEVL 184
Y+ PE +
Sbjct: 220 VNYMPPEAI 228
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYREIVGS 175
++ V+ H G++H DLKP NFL + +LK DFG++ + V VG+
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGT 219
Query: 176 PYYIAPEVL 184
Y+ PE +
Sbjct: 220 VNYMPPEAI 228
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYREIVGS 175
++ V+ H G++H DLKP NFL + +LK DFG++ + V VG+
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGA 219
Query: 176 PYYIAPEVL 184
Y+ PE +
Sbjct: 220 VNYMPPEAI 228
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGL---SVFFEEGKVYREIVGSPYYI 179
+N H +HRD+K N L DE K +DFGL S F + + IVG+ Y+
Sbjct: 146 INFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYM 202
Query: 180 APEVLLQKMDQRVD 193
APE L ++ + D
Sbjct: 203 APEALRGEITPKSD 216
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 69/182 (37%), Gaps = 62/182 (34%)
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
H G++HRDLKP N + +E+ LK DFGL+ + V + +Y APEV+L
Sbjct: 145 HAAGIIHRDLKPGNL---AVNEDCELKILDFGLAR--QADSEMXGXVVTRWYRAPEVILN 199
Query: 187 KM--DQRVD--------------------------------------------------A 194
M Q VD
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 259
Query: 195 AILKGEINFQRDPFPS----ASSSAIELVHRMLTQDPKRRIIAAQ-VVHPWLKESGEASD 249
+KG ++ F S AS A+ L+ +ML D ++R+ A + + HP+ + + D
Sbjct: 260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTED 319
Query: 250 KP 251
+P
Sbjct: 320 EP 321
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGL---SVFFEEGKVYREIVGSPYYI 179
+N H +HRD+K N L DE K +DFGL S F + + IVG+ Y+
Sbjct: 146 INFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYM 202
Query: 180 APEVLLQKMDQRVD 193
APE L ++ + D
Sbjct: 203 APEALRGEITPKSD 216
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 75/197 (38%), Gaps = 33/197 (16%)
Query: 13 HPAARQLHDAILGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLV 72
+P RQL + E + + ++LG G +G Y TG A K + +
Sbjct: 9 NPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL 68
Query: 73 KDYEKDDVRGEVEVMQYLSGQPSILF-----------------------DRIVARGH-YS 108
++ K E+ +MQ + + D I R +
Sbjct: 69 QEIIK-----EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLT 123
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV 168
E A +L+ + + H +HRD+K N L + K DFG++ +
Sbjct: 124 EDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNT---EGHAKLADFGVAGQLTDXMA 180
Query: 169 YRE-IVGSPYYIAPEVL 184
R ++G+P+++APEV+
Sbjct: 181 KRNXVIGTPFWMAPEVI 197
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYREIVGS 175
++ V+ H G++H DLKP NFL + +LK DFG++ + V VG+
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQVGT 191
Query: 176 PYYIAPEVL 184
Y+ PE +
Sbjct: 192 VNYMPPEAI 200
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYREIVGS 175
++ V+ H G++H DLKP NFL + +LK DFG++ + V VG+
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGT 191
Query: 176 PYYIAPEVL 184
Y+ PE +
Sbjct: 192 VNYMPPEAI 200
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYREIVGS 175
++ V+ H G++H DLKP NFL + +LK DFG++ + V VG+
Sbjct: 117 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGT 172
Query: 176 PYYIAPEVL 184
Y+ PE +
Sbjct: 173 VNYMPPEAI 181
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGL---SVFFEEGKVYREIVGSPYYI 179
+N H +HRD+K N L DE K +DFGL S F + + IVG+ Y+
Sbjct: 140 INFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYM 196
Query: 180 APEVLLQKMDQRVD 193
APE L ++ + D
Sbjct: 197 APEALRGEITPKSD 210
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 107 YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG 166
++++ A+L + +++ HC DLKPEN L + +A +K DFG S + G
Sbjct: 162 FAQQMCTALLFLATPELSIIHC------DLKPENILLCNPKRSA-IKIVDFGSSC--QLG 212
Query: 167 KVYREIVGSPYYIAPEVLL 185
+ + + S +Y +PEVLL
Sbjct: 213 QRIYQXIQSRFYRSPEVLL 231
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 107 YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG 166
++++ A+L + +++ HC DLKPEN L + +A +K DFG S + G
Sbjct: 143 FAQQMCTALLFLATPELSIIHC------DLKPENILLCNPKRSA-IKIVDFGSSC--QLG 193
Query: 167 KVYREIVGSPYYIAPEVLL 185
+ + + S +Y +PEVLL
Sbjct: 194 QRIYQXIQSRFYRSPEVLL 212
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYREIVGS 175
++ V+ H G++H DLKP NFL + +LK DFG++ + V VG+
Sbjct: 120 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGT 175
Query: 176 PYYIAPEVL 184
Y+ PE +
Sbjct: 176 VNYMPPEAI 184
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS 160
+ R I+ ++ H +G++HRDLKP N DE+ +K DFGL+
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLA 163
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYREIVGS 175
++ V+ H G++H DLKP NFL + +LK DFG++ + V VG+
Sbjct: 116 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGT 171
Query: 176 PYYIAPEVL 184
Y+ PE +
Sbjct: 172 VNYMPPEAI 180
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS 160
+ R I+ ++ H +G++HRDLKP N DE+ +K DFGL+
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLA 163
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 75/199 (37%), Gaps = 53/199 (26%)
Query: 35 YTIGKELGRGEFGITYLCTENSTG-LQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
Y I LG G FG C ++ G + A K I K V+ Y K+ R E+ V++ ++ +
Sbjct: 35 YEIVSTLGEGTFGRVVQCVDHRRGGARVALKII---KNVEKY-KEAARLEINVLEKINEK 90
Query: 94 PS-------ILFDRIVARGH-----------------------YSERAAAAVLRVIMGVV 123
+FD GH Y + + V
Sbjct: 91 DPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAV 150
Query: 124 NVCHCRGVMHRDLKPENFLFTSWD----------------ENALLKATDFGLSVFFEEGK 167
H + H DLKPEN LF + D ++ ++ DFG + F E
Sbjct: 151 KFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEH- 209
Query: 168 VYREIVGSPYYIAPEVLLQ 186
+ IV + +Y APEV+L+
Sbjct: 210 -HSTIVSTRHYRAPEVILE 227
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK-----VY 169
V+++++ + H ++HRD+K N L T + +LK DFGL+ F K Y
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 170 REIVGSPYYIAPEVLLQKMD 189
V + +Y PE+LL + D
Sbjct: 187 XNRVVTLWYRPPELLLGERD 206
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK-----VY 169
V+++++ + H ++HRD+K N L T + +LK DFGL+ F K Y
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 170 REIVGSPYYIAPEVLLQKMD 189
V + +Y PE+LL + D
Sbjct: 187 XNRVVTLWYRPPELLLGERD 206
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK-----VY 169
V+++++ + H ++HRD+K N L T + +LK DFGL+ F K Y
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 170 REIVGSPYYIAPEVLLQKMD 189
V + +Y PE+LL + D
Sbjct: 187 XNRVVTLWYRPPELLLGERD 206
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK-----VY 169
V+++++ + H ++HRD+K N L T + +LK DFGL+ F K Y
Sbjct: 129 VMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRY 185
Query: 170 REIVGSPYYIAPEVLLQKMD 189
V + +Y PE+LL + D
Sbjct: 186 XNRVVTLWYRPPELLLGERD 205
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 107 YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG 166
++++ A+L + +++ HC DLKPEN L + A +K DFG S + G
Sbjct: 162 FAQQMCTALLFLATPELSIIHC------DLKPENILLCNPKRXA-IKIVDFGSSC--QLG 212
Query: 167 KVYREIVGSPYYIAPEVLL 185
+ + + S +Y +PEVLL
Sbjct: 213 QRIYQXIQSRFYRSPEVLL 231
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 74/195 (37%), Gaps = 59/195 (30%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS--G 92
+ + + G+G FG L E STG+ A K + + ++ E+++MQ L+
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRN-------RELQIMQDLAVLH 77
Query: 93 QPSI-----------------LFDRIV-----------ARGHYSERAAAA---------- 114
P+I ++ +V R +Y + A
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQ 137
Query: 115 VLRVI----MGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYR 170
++R I + VNVCH RD+KP N L D LK DFG + +
Sbjct: 138 LIRSIGCLHLPSVNVCH------RDIKPHNVLVNEAD--GTLKLCDFGSAKKLSPSEPNV 189
Query: 171 EIVGSPYYIAPEVLL 185
+ S YY APE++
Sbjct: 190 AYICSRYYRAPELIF 204
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 43/206 (20%)
Query: 19 LHDAILGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVK----- 73
H A G Y+D Y + ++LG G F +L + A K + K+
Sbjct: 7 FHPAFKGEPYKDAR--YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED 64
Query: 74 -----------DYEKDDVRGEVEVMQYL--------SGQPSILFDRIVARG------HYS 108
D K+D G +++ L +G ++ ++ Y
Sbjct: 65 EIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE 124
Query: 109 ERAAAAVL------RVIMGVVNVCHCRGVMHRDLKPENFLFTSWD--ENAL-LKATDFGL 159
R + ++++G+ + G++H D+KPEN L D EN + +K D G
Sbjct: 125 HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGN 184
Query: 160 SVFFEEGKVYREIVGSPYYIAPEVLL 185
+ +++E Y + + Y +PEVLL
Sbjct: 185 ACWYDEH--YTNSIQTREYRSPEVLL 208
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 82/209 (39%), Gaps = 51/209 (24%)
Query: 16 ARQLHDAILGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSI--------- 66
+ +H LG Y D+ K LG G G+ + +N + A K I
Sbjct: 1 SMNIHGFDLGSRYMDL-------KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVK 53
Query: 67 ---SKRKLVKDYEKDDVRGEVEVMQYLSGQPSILFD-----------------------R 100
+ K+++ + D++ V+V + L S L D
Sbjct: 54 HALREIKIIRRLDHDNI---VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLAN 110
Query: 101 IVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS 160
++ +G E A + ++ + H V+HRDLKP N + E+ +LK DFGL+
Sbjct: 111 VLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--EDLVLKIGDFGLA 168
Query: 161 VFFEEGKVYR----EIVGSPYYIAPEVLL 185
+ ++ E + + +Y +P +LL
Sbjct: 169 RIMDPHYSHKGHLSEGLVTKWYRSPRLLL 197
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLS---VFFEEGKVYREIVGSPYYIAPEV 183
H R ++HRD+K N L DEN + K TDFG+S ++ + + G+ YI PE
Sbjct: 156 HTRAIIHRDVKSINILL---DENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEY 212
Query: 184 LLQ 186
++
Sbjct: 213 FIK 215
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 86/232 (37%), Gaps = 63/232 (27%)
Query: 48 ITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHY 107
I Y CTE Q+ + L + E+ D +L +P L + +
Sbjct: 81 IRYFCTEKDRQFQYIAIELCAATLQEYVEQKD-------FAHLGLEPITLLQQTTS---- 129
Query: 108 SERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKA--TDFGLSVFFEE 165
G+ ++ H ++HRDLKP N L + + + +KA +DFGL
Sbjct: 130 -------------GLAHL-HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175
Query: 166 GKVYRE----IVGSPYYIAPEVLLQKMDQR----VD------------------------ 193
G+ + G+ +IAPE+L + + VD
Sbjct: 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ 235
Query: 194 --AAILKGEINFQ-RDPFPSASSSAIELVHRMLTQDPKRRIIAAQVV-HPWL 241
A IL G + P A EL+ +M+ DP++R A V+ HP+
Sbjct: 236 RQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 43/205 (20%)
Query: 20 HDAILGRTYEDVELHYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVK------ 73
H A G Y+D Y + ++LG G F +L + A K + K+
Sbjct: 8 HPAFKGEPYKDAR--YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDE 65
Query: 74 ----------DYEKDDVRGEVEVMQYL--------SGQPSILFDRIVARG------HYSE 109
D K+D G +++ L +G ++ ++ Y
Sbjct: 66 IKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEH 125
Query: 110 RAAAAVL------RVIMGVVNVCHCRGVMHRDLKPENFLFTSWD--ENAL-LKATDFGLS 160
R + ++++G+ + G++H D+KPEN L D EN + +K D G +
Sbjct: 126 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185
Query: 161 VFFEEGKVYREIVGSPYYIAPEVLL 185
+++E Y + + Y +PEVLL
Sbjct: 186 CWYDEH--YTNSIQTREYRSPEVLL 208
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 115 VLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS 160
+ R I+ ++ H +G++HR+LKP N DE+ +K DFGL+
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFI---DESRNVKIGDFGLA 163
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 104 RGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFF 163
+G + A A++R I ++ H G HRD+KPEN L ++ D L+ DFG++
Sbjct: 128 QGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLV---DFGIASAT 184
Query: 164 EEGKVYR--EIVGSPYYIAPE 182
+ K+ + VG+ YY APE
Sbjct: 185 TDEKLTQLGNTVGTLYYXAPE 205
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGL---SVFFEEGKVYREIVGSPYYI 179
+N H +HRD+K N L DE K +DFGL S F + IVG+ Y
Sbjct: 137 INFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYX 193
Query: 180 APEVLLQKMDQRVD 193
APE L ++ + D
Sbjct: 194 APEALRGEITPKSD 207
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE-GKVYREIV--GSPYYIAPEV 183
H R ++HRD+K N L DEN + K TDFG+S E G+ + V G+ YI PE
Sbjct: 156 HTRAIIHRDVKSINILL---DENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEY 212
Query: 184 LLQ 186
++
Sbjct: 213 FIK 215
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVF---FEEGKVYREIVGSPYYI 179
++ H + ++HRDLK N E+ +K DFGL+ + + ++ GS ++
Sbjct: 121 MDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 177
Query: 180 APEVL 184
APEV+
Sbjct: 178 APEVI 182
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVF---FEEGKVYREIVGSPYYI 179
++ H + ++HRDLK N E+ +K DFGL+ + + ++ GS ++
Sbjct: 145 MDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 201
Query: 180 APEVL 184
APEV+
Sbjct: 202 APEVI 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVF---FEEGKVYREIVGSPYYI 179
++ H + ++HRDLK N E+ +K DFGL+ + + ++ GS ++
Sbjct: 144 MDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 200
Query: 180 APEVL 184
APEV+
Sbjct: 201 APEVI 205
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 34/168 (20%)
Query: 35 YTIGKELGRGEFGITYLCTENSTGLQFACK--SISKRKLVKDYEKDDVRGEVEVMQYLSG 92
+ +G+++G G FG YL T T + A K ++ + YE R ++Q +G
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYR----ILQGGTG 64
Query: 93 QPSILFDRIVARGHYSERAAAAVLRVIMGVVNVC-----------------------HCR 129
P++ + G Y+ + + + N C H +
Sbjct: 65 IPNVRW--FGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 122
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY 177
+HRD+KP+NFL + DFGL+ + + ++ I PY
Sbjct: 123 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHI---PY 167
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVF---FEEGKVYREIVGSPYYI 179
++ H + ++HRDLK N E+ +K DFGL+ + + ++ GS ++
Sbjct: 122 MDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 180 APEVL 184
APEV+
Sbjct: 179 APEVI 183
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVF---FEEGKVYREIVGSPYYI 179
++ H + ++HRDLK N E+ +K DFGL+ + + ++ GS ++
Sbjct: 122 MDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 180 APEVL 184
APEV+
Sbjct: 179 APEVI 183
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVF---FEEGKVYREIVGSPYYI 179
++ H + ++HRDLK N E+ +K DFGL+ + + ++ GS ++
Sbjct: 119 MDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 175
Query: 180 APEVL 184
APEV+
Sbjct: 176 APEVI 180
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVF---FEEGKVYREIVGSPYYI 179
++ H + ++HRDLK N E+ +K DFGL+ + + ++ GS ++
Sbjct: 117 MDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 180 APEVL 184
APEV+
Sbjct: 174 APEVI 178
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVF---FEEGKVYREIVGSPYYI 179
++ H + ++HRDLK N E+ +K DFGL+ + + ++ GS ++
Sbjct: 117 MDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 180 APEVL 184
APEV+
Sbjct: 174 APEVI 178
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSV---FFEEGKVYREIVGSPYYI 179
++ H + ++HRDLK N E+ +K DFGL+ + + ++ GS ++
Sbjct: 133 MDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 180 APEVL 184
APEV+
Sbjct: 190 APEVI 194
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSV---FFEEGKVYREIVGSPYYI 179
++ H + ++HRDLK N E+ +K DFGL+ + + ++ GS ++
Sbjct: 133 MDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 180 APEVL 184
APEV+
Sbjct: 190 APEVI 194
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 29/227 (12%)
Query: 86 VMQYLSGQPSILFDR--IVARGHYSERAAAAVLR-VIMGVVN----VCHCRGVMHRDLKP 138
+ +Y+ + FD V +Y+ V++ +I V+N + + + + HRD+KP
Sbjct: 121 IYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKP 180
Query: 139 ENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMD---QRVDA- 194
N L D+N +K +DFG S + + K+ + G+ ++ PE + +VD
Sbjct: 181 SNILM---DKNGRVKLSDFGESEYMVDKKI-KGSRGTYEFMPPEFFSNESSYNGAKVDIW 236
Query: 195 --AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEA----- 247
I + + PF S S +EL + + T++ + + ++P +
Sbjct: 237 SLGICLYVMFYNVVPF-SLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFL 295
Query: 248 SDKPIDTAVIFRMKQNTAMNKLKKLALK--W---HSYDELREGSAKL 289
S++ ID +F +++N A + ALK W + ++LRE S +L
Sbjct: 296 SNEDIDFLKLF-LRKNPAERITSEDALKHEWLADTNIEDLREFSKEL 341
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSV---FFEEGKVYREIVGSPYYI 179
++ H + ++HRDLK N E+ +K DFGL+ + + ++ GS ++
Sbjct: 145 MDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 201
Query: 180 APEVL 184
APEV+
Sbjct: 202 APEVI 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSV---FFEEGKVYREIVGSPYYI 179
++ H + ++HRDLK N E+ +K DFGL+ + + ++ GS ++
Sbjct: 137 MDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 193
Query: 180 APEVL 184
APEV+
Sbjct: 194 APEVI 198
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWD----------ENALLKATDFG 158
E ++LR I V H ++HRDLKP+N L ++ EN + +DFG
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 159 LSVFFEEGK-VYREIVGSPY----YIAPEVL 184
L + G+ +R + +P + APE+L
Sbjct: 174 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELL 204
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 26/168 (15%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKR------KLVKDYEKDDVRGEVEVMQYLSGQP 94
LG+G +GI Y + S ++ A K I +R L ++ ++QYL
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 95 SILFDRI----VARGHYS-------------ERAAAAVLRVIMGVVNVCHCRGVMHRDLK 137
F +I V G S E+ + I+ + H ++HRD+K
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 149
Query: 138 PENFLFTSWDENALLKATDFGLSVFFEE-GKVYREIVGSPYYIAPEVL 184
+N L ++ + +LK +DFG S G+ Y+APE++
Sbjct: 150 GDNVLINTY--SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEII 195
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 172 IVGSPYYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKRRI 231
I+G+P E L ++ +R K E + FP++S+ AI L+ RML +P +RI
Sbjct: 330 ILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRI 389
Query: 232 -IAAQVVHPWLKE 243
I + HP+ KE
Sbjct: 390 TINECLAHPFFKE 402
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLS 160
V H G++HRDLKP N L +++ +K DFGL+
Sbjct: 169 VKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLA 203
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 26/168 (15%)
Query: 41 LGRGEFGITYLCTENSTGLQFACKSISKR------KLVKDYEKDDVRGEVEVMQYLSGQP 94
LG+G +GI Y + S ++ A K I +R L ++ ++QYL
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 95 SILFDRI----VARGHYS-------------ERAAAAVLRVIMGVVNVCHCRGVMHRDLK 137
F +I V G S E+ + I+ + H ++HRD+K
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 135
Query: 138 PENFLFTSWDENALLKATDFGLSVFFEE-GKVYREIVGSPYYIAPEVL 184
+N L ++ + +LK +DFG S G+ Y+APE++
Sbjct: 136 GDNVLINTY--SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEII 181
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 109 ERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWD----------ENALLKATDFG 158
E ++LR I V H ++HRDLKP+N L ++ EN + +DFG
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 159 LSVFFEEGK-VYREIVGSPY----YIAPEVL 184
L + G+ +R + +P + APE+L
Sbjct: 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELL 204
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSV---FFEEGKVYREIVGSPYYI 179
++ H + ++HRDLK N E+ +K DFGL+ + + ++ GS ++
Sbjct: 117 MDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 173
Query: 180 APEVL 184
APEV+
Sbjct: 174 APEVI 178
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 130 GVMHRDLKPENFLFTSWDENAL--LKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
V+HRD+KP N L NAL +K DFG+S + + G Y+APE + +
Sbjct: 174 SVIHRDVKPSNVLI-----NALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPE 228
Query: 188 MDQR 191
++Q+
Sbjct: 229 LNQK 232
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 19/84 (22%)
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYRE--------------- 171
H ++HRDL N L EN + DFGL+ + K E
Sbjct: 125 HSMNIIHRDLNSHNCLVR---ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT 181
Query: 172 IVGSPYYIAPEVLL-QKMDQRVDA 194
+VG+PY++APE++ + D++VD
Sbjct: 182 VVGNPYWMAPEMINGRSYDEKVDV 205
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 32/169 (18%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAA-AVLRVIMGVVNVCHCRGVMHRDLKPENFLFT 144
VM+Y+ GQ R ++G A A A L I+ ++ H G+++ DLKPEN + T
Sbjct: 162 VMEYVGGQS---LKR--SKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT 216
Query: 145 SWDENALLKATDFG-LSVFFEEGKVYREIVGSPYYIAPEVL---------LQKMDQRVDA 194
LK D G +S G +Y G+P + APE++ + + + + A
Sbjct: 217 ----EEQLKLIDLGAVSRINSFGYLY----GTPGFQAPEIVRTGPTVATDIYTVGRTLAA 268
Query: 195 AILKGEINFQR--------DPFPSASSSAIELVHRMLTQDPKRRIIAAQ 235
L R DP S L+ R + DP++R A+
Sbjct: 269 LTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAE 317
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLL-QK 187
+ ++HRDLKP N L + +LK DFG + + + GS ++APEV
Sbjct: 125 KALIHRDLKPPNLLLVA--GGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSN 180
Query: 188 MDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
++ D I+ E+ +R PF A ++
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 215
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 41/220 (18%)
Query: 36 TIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS---- 91
T +E+G G+FG+ +L + + A K+I + + +DD E EVM LS
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKD-KVAIKTIKEGSM----SEDDFIEEAEVMMKLSHPKL 84
Query: 92 ---------GQPSILFDRIVARGHYS-----ERAAAAVLRVIMGVVNVCHCRG------V 131
P L + G S +R A ++ ++VC V
Sbjct: 85 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 144
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL-LQK 187
+HRDL N L EN ++K +DFG++ F + + Y G+ + + +PEV +
Sbjct: 145 IHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSR 200
Query: 188 MDQRVDA---AILKGEINFQRDPFPSASSSAIELVHRMLT 224
+ D +L E+ F P + S E+V + T
Sbjct: 201 YSSKSDVWSFGVLMWEV-FSEGKIPYENRSNSEVVEDIST 239
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLL-QK 187
+ ++HRDLKP N L + +LK DFG + + + GS ++APEV
Sbjct: 124 KALIHRDLKPPNLLLVA--GGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSN 179
Query: 188 MDQRVDA---AILKGEINFQRDPFPSASSSAIELV 219
++ D I+ E+ +R PF A ++
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 214
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 123/304 (40%), Gaps = 66/304 (21%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE 85
E H ++LG+G FG +C +++TG A K + S + ++D+E+ E+E
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-----EIE 63
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV--------------NVCH---- 127
+++ S+ D IV A L++IM + + H
Sbjct: 64 ILK------SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 128 ------CRGV--------MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVY---R 170
C+G+ +HRDL N L +EN +K DFGL+ + K + +
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENR-VKIGDFGLTKVLPQDKEFFKVK 174
Query: 171 EIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
E SP ++ APE L + G + ++ + S S RM+ D +
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 234
Query: 230 RIIAAQVVHPWLKESGEASDK---PIDTAVIFRMKQNTAMNK---LKKLALKWHSYDELR 283
++I ++ LK +G P + +I N +N+ + LAL+ D++R
Sbjct: 235 QMIVFHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR---VDQIR 290
Query: 284 EGSA 287
+ A
Sbjct: 291 DNMA 294
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 123/304 (40%), Gaps = 66/304 (21%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE 85
E H ++LG+G FG +C +++TG A K + S + ++D+E+ E+E
Sbjct: 10 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-----EIE 64
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV--------------NVCH---- 127
+++ S+ D IV A L++IM + + H
Sbjct: 65 ILK------SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 118
Query: 128 ------CRGV--------MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVY---R 170
C+G+ +HR+L N L +EN +K DFGL+ + K Y +
Sbjct: 119 QYTSQICKGMEYLGTKRYIHRNLATRNILVE--NENR-VKIGDFGLTKVLPQDKEYYKVK 175
Query: 171 EIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
E SP ++ APE L + G + ++ + S S RM+ D +
Sbjct: 176 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 235
Query: 230 RIIAAQVVHPWLKESGEASDK---PIDTAVIFRMKQNTAMNK---LKKLALKWHSYDELR 283
++I ++ LK +G P + +I N +N+ + LAL+ D++R
Sbjct: 236 QMIVFHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR---VDQIR 291
Query: 284 EGSA 287
+ A
Sbjct: 292 DNMA 295
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 114 AVLRVIMGVVNVCHCRGVMHRDLKPENFLFT-SWDENALLKATDFGLSVFFEEG----KV 168
++L I+ ++ H V+HRDLKP N L E +K D G + F
Sbjct: 132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191
Query: 169 YREIVGSPYYIAPEVLL 185
+V + +Y APE+LL
Sbjct: 192 LDPVVVTFWYRAPELLL 208
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 112 AAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYR 170
A + I V+ H + ++HRDLKP N + +K DFGL + +GK R
Sbjct: 138 ALELFEQITKGVDYIHSKKLIHRDLKPSNIFLV---DTKQVKIGDFGLVTSLKNDGKRTR 194
Query: 171 EIVGSPYYIAPE 182
G+ Y++PE
Sbjct: 195 S-KGTLRYMSPE 205
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 18/76 (23%)
Query: 127 HCRGVMHRDLKPENFLF------TSWDE----------NALLKATDFGLSVFFEEGKVYR 170
H + H DLKPEN LF T ++E N ++ DFG + F E +
Sbjct: 172 HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH--HT 229
Query: 171 EIVGSPYYIAPEVLLQ 186
IV + +Y PEV+L+
Sbjct: 230 TIVATRHYRPPEVILE 245
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 18/76 (23%)
Query: 127 HCRGVMHRDLKPENFLF------TSWDE----------NALLKATDFGLSVFFEEGKVYR 170
H + H DLKPEN LF T ++E N ++ DFG + F E +
Sbjct: 149 HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH--HT 206
Query: 171 EIVGSPYYIAPEVLLQ 186
IV + +Y PEV+L+
Sbjct: 207 TIVATRHYRPPEVILE 222
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 33/180 (18%)
Query: 40 ELGRGEFGITYLCTENSTGLQFACKSI-------SKRKLVKD----------------YE 76
ELGRG +G+ +G A K I +++L+ D Y
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 77 KDDVRGEVEV-MQYLSGQPSILFDRIVARGH-YSERAAAAVLRVIMGVVNVCHCR-GVMH 133
G+V + M+ + + +++ +G E + I+ + H + V+H
Sbjct: 74 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 133
Query: 134 RDLKPENFLFTSWDENAL--LKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQKMDQR 191
RD+KP N L NAL +K DFG+S + + G Y+APE + +++Q+
Sbjct: 134 RDVKPSNVLI-----NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQK 188
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 18/76 (23%)
Query: 127 HCRGVMHRDLKPENFLF------TSWDE----------NALLKATDFGLSVFFEEGKVYR 170
H + H DLKPEN LF T ++E N ++ DFG + F E +
Sbjct: 140 HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH--HT 197
Query: 171 EIVGSPYYIAPEVLLQ 186
IV + +Y PEV+L+
Sbjct: 198 TIVATRHYRPPEVILE 213
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 31/154 (20%)
Query: 34 HYTIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLSGQ 93
+Y I +GRG +G YL + + A K ++ R + + E+ ++ L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVN-RMFEDLIDCKRILREITILNRLKSD 87
Query: 94 PSI-LFDRIVARG--------------------------HYSERAAAAVLRVIMGVVNVC 126
I L D I+ +E+ +L ++
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFI 147
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLS 160
H G++HRDLKP N L +++ +K DFGL+
Sbjct: 148 HESGIIHRDLKPANCLL---NQDCSVKICDFGLA 178
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 75/187 (40%), Gaps = 40/187 (21%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVM 87
E H +LG+G FG LC ++TG A K + D ++D R E++++
Sbjct: 6 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQR-EIQIL 62
Query: 88 Q--------------YLSGQPSI-LFDRIVARGHYSE-----RAAAAVLRVIMGVVNVCH 127
+ Y G+P + L + G + RA R+++ +C
Sbjct: 63 KALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 122
Query: 128 ------CRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYREIVGSP-Y 177
R +HRDL N L S A +K DFGL+ K V RE SP +
Sbjct: 123 GMEYLGSRRCVHRDLAARNILVES---EAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF 179
Query: 178 YIAPEVL 184
+ APE L
Sbjct: 180 WYAPESL 186
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 41/220 (18%)
Query: 36 TIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS---- 91
T +E+G G+FG+ +L + + A K+I + + ++D E EVM LS
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKD-KVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKL 65
Query: 92 ---------GQPSILFDRIVARGHYS-----ERAAAAVLRVIMGVVNVCHCRG------V 131
P L + G S +R A ++ ++VC V
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 125
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL-LQK 187
+HRDL N L EN ++K +DFG++ F + + Y G+ + + +PEV +
Sbjct: 126 IHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSR 181
Query: 188 MDQRVDA---AILKGEINFQRDPFPSASSSAIELVHRMLT 224
+ D +L E+ F P + S E+V + T
Sbjct: 182 YSSKSDVWSFGVLMWEV-FSEGKIPYENRSNSEVVEDIST 220
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 27/85 (31%)
Query: 261 KQNTAMNKLKKLALK---------------------------WHSYDELREGSAKLGSTL 293
KQ +A NK KK AL+ +++EL+ G ++G+ L
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 294 TGFNAKQYMQAADIDGNGTIDYIEL 318
QAAD+D +GTIDY E
Sbjct: 61 KESEILDLXQAADVDNSGTIDYKEF 85
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 123/306 (40%), Gaps = 66/306 (21%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE 85
E H ++LG+G FG +C +++TG A K + S + ++D+E+ E+E
Sbjct: 13 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-----EIE 67
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV--------------NVCH---- 127
+++ S+ D IV A L++IM + + H
Sbjct: 68 ILK------SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 121
Query: 128 ------CRGV--------MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYR 170
C+G+ +HRDL N L +EN +K DFGL+ + K +
Sbjct: 122 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENR-VKIGDFGLTKVLPQDKEXXKVK 178
Query: 171 EIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
E SP ++ APE L + G + ++ + S S RM+ D +
Sbjct: 179 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 238
Query: 230 RIIAAQVVHPWLKESGEASDK---PIDTAVIFRMKQNTAMNK---LKKLALKWHSYDELR 283
++I ++ LK +G P + +I N +N+ + LAL+ D++R
Sbjct: 239 QMIVFHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR---VDQIR 294
Query: 284 EGSAKL 289
+ A L
Sbjct: 295 DNMAGL 300
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 116 LRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGS 175
LR + + H +G++H D+KP N K DFGL V G
Sbjct: 163 LRDTLLALAHLHSQGLVHLDVKPANIFL---GPRGRCKLGDFGLLVELGTAGAGEVQEGD 219
Query: 176 PYYIAPEVL 184
P Y+APE+L
Sbjct: 220 PRYMAPELL 228
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 111/281 (39%), Gaps = 64/281 (22%)
Query: 14 PAARQLH-DAILGRTYEDV------ELHYTIGKELGRGEFGITYLC----TENSTGLQFA 62
P L+ +G +ED E H ++LG+G FG +C +++TG A
Sbjct: 15 PTTENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVA 74
Query: 63 CKSI--SKRKLVKDYEKDDVRGEVEVMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIM 120
K + S + ++D+E+ E+E+++ S+ D IV A L++IM
Sbjct: 75 VKKLQHSTEEHLRDFER-----EIEILK------SLQHDNIVKYKGVCYSAGRRNLKLIM 123
Query: 121 GVV--------------NVCH----------CRGV--------MHRDLKPENFLFTSWDE 148
+ + H C+G+ +HRDL N L +E
Sbjct: 124 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE--NE 181
Query: 149 NALLKATDFGLSVFFEEGK---VYREIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQ 204
N +K DFGL+ + K +E SP ++ APE L + G + ++
Sbjct: 182 NR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 240
Query: 205 RDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESG 245
+ S S RM+ D + ++I ++ LK +G
Sbjct: 241 LFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE-LLKNNG 280
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 131 VMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVL-----L 185
++HRD+KP N L D + +K DFG+S + G Y+APE +
Sbjct: 147 IIHRDIKPSNILL---DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASR 203
Query: 186 QKMDQRVDA---AILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
Q D R D I E+ R P+P +S + + +++ DP +
Sbjct: 204 QGYDVRSDVWSLGITLYELATGRFPYPKW-NSVFDQLTQVVKGDPPQ 249
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 66/304 (21%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE 85
E H ++LG+G FG +C +++TG A K + S + ++D+E+ E+E
Sbjct: 14 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-----EIE 68
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV--------------NVCH---- 127
+++ S+ D IV A L++IM + + H
Sbjct: 69 ILK------SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 122
Query: 128 ------CRGV--------MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYR 170
C+G+ +HRDL N L +EN +K DFGL+ + K +
Sbjct: 123 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENR-VKIGDFGLTKVLPQDKEXXKVK 179
Query: 171 EIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
E SP ++ APE L + G + ++ + S S RM+ D +
Sbjct: 180 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 239
Query: 230 RIIAAQVVHPWLKESGEASDK---PIDTAVIFRMKQNTAMNK---LKKLALKWHSYDELR 283
++I ++ LK +G P + +I N +N+ + LAL+ D++R
Sbjct: 240 QMIVFHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR---VDQIR 295
Query: 284 EGSA 287
+ A
Sbjct: 296 DNMA 299
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 34.3 bits (77), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 66/304 (21%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE 85
E H ++LG+G FG +C +++TG A K + S + ++D+E+ E+E
Sbjct: 16 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-----EIE 70
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV--------------NVCH---- 127
+++ S+ D IV A L++IM + + H
Sbjct: 71 ILK------SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 124
Query: 128 ------CRGV--------MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYR 170
C+G+ +HRDL N L +EN +K DFGL+ + K +
Sbjct: 125 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENR-VKIGDFGLTKVLPQDKEXXKVK 181
Query: 171 EIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
E SP ++ APE L + G + ++ + S S RM+ D +
Sbjct: 182 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 241
Query: 230 RIIAAQVVHPWLKESGEASDK---PIDTAVIFRMKQNTAMNK---LKKLALKWHSYDELR 283
++I ++ LK +G P + +I N +N+ + LAL+ D++R
Sbjct: 242 QMIVFHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR---VDQIR 297
Query: 284 EGSA 287
+ A
Sbjct: 298 DNMA 301
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 34.3 bits (77), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 66/304 (21%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE 85
E H ++LG+G FG +C +++TG A K + S + ++D+E+ E+E
Sbjct: 12 ERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-----EIE 66
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV--------------NVCH---- 127
+++ S+ D IV A L++IM + + H
Sbjct: 67 ILK------SLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLL 120
Query: 128 ------CRGV--------MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYR 170
C+G+ +HRDL N L +EN +K DFGL+ + K +
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENR-VKIGDFGLTKVLPQDKEXXKVK 177
Query: 171 EIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
E SP ++ APE L + G + ++ + S S RM+ D +
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 237
Query: 230 RIIAAQVVHPWLKESGEASDK---PIDTAVIFRMKQNTAMNK---LKKLALKWHSYDELR 283
++I ++ LK +G P + +I N +N+ + LAL+ D++R
Sbjct: 238 QMIVFHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR---VDQIR 293
Query: 284 EGSA 287
+ A
Sbjct: 294 DNMA 297
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 66/304 (21%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE 85
E H ++LG+G FG +C +++TG A K + S + ++D+E+ E+E
Sbjct: 15 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-----EIE 69
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV--------------NVCH---- 127
+++ S+ D IV A L++IM + + H
Sbjct: 70 ILK------SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 123
Query: 128 ------CRGV--------MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYR 170
C+G+ +HRDL N L +EN +K DFGL+ + K +
Sbjct: 124 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENR-VKIGDFGLTKVLPQDKEXXKVK 180
Query: 171 EIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
E SP ++ APE L + G + ++ + S S RM+ D +
Sbjct: 181 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 240
Query: 230 RIIAAQVVHPWLKESGEASDK---PIDTAVIFRMKQNTAMNK---LKKLALKWHSYDELR 283
++I ++ LK +G P + +I N +N+ + LAL+ D++R
Sbjct: 241 QMIVFHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR---VDQIR 296
Query: 284 EGSA 287
+ A
Sbjct: 297 DNMA 300
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 66/304 (21%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE 85
E H ++LG+G FG +C +++TG A K + S + ++D+E+ E+E
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-----EIE 63
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV--------------NVCH---- 127
+++ S+ D IV A L++IM + + H
Sbjct: 64 ILK------SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 128 ------CRGV--------MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYR 170
C+G+ +HRDL N L +EN +K DFGL+ + K +
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENR-VKIGDFGLTKVLPQDKEXXKVK 174
Query: 171 EIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
E SP ++ APE L + G + ++ + S S RM+ D +
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 234
Query: 230 RIIAAQVVHPWLKESGEASDK---PIDTAVIFRMKQNTAMNK---LKKLALKWHSYDELR 283
++I ++ LK +G P + +I N +N+ + LAL+ D++R
Sbjct: 235 QMIVFHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR---VDQIR 290
Query: 284 EGSA 287
+ A
Sbjct: 291 DNMA 294
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 34.3 bits (77), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 130 GVMHRDLKPENFLFTSWDENAL--LKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLLQK 187
V+HRD+KP N L NAL +K DFG+S + + G Y APE + +
Sbjct: 157 SVIHRDVKPSNVLI-----NALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPE 211
Query: 188 MDQR 191
++Q+
Sbjct: 212 LNQK 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 66/304 (21%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE 85
E H ++LG+G FG +C +++TG A K + S + ++D+E+ E+E
Sbjct: 27 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-----EIE 81
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV--------------NVCH---- 127
+++ S+ D IV A L++IM + + H
Sbjct: 82 ILK------SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 135
Query: 128 ------CRGV--------MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYR 170
C+G+ +HRDL N L +EN +K DFGL+ + K +
Sbjct: 136 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENR-VKIGDFGLTKVLPQDKEXXKVK 192
Query: 171 EIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
E SP ++ APE L + G + ++ + S S RM+ D +
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 252
Query: 230 RIIAAQVVHPWLKESGEASDK---PIDTAVIFRMKQNTAMNK---LKKLALKWHSYDELR 283
++I ++ LK +G P + +I N +N+ + LAL+ D++R
Sbjct: 253 QMIVFHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR---VDQIR 308
Query: 284 EGSA 287
+ A
Sbjct: 309 DNMA 312
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 66/304 (21%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE 85
E H ++LG+G FG +C +++TG A K + S + ++D+E+ E+E
Sbjct: 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-----EIE 63
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV--------------NVCH---- 127
+++ S+ D IV A L++IM + + H
Sbjct: 64 ILK------SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 128 ------CRGV--------MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYR 170
C+G+ +HRDL N L +EN +K DFGL+ + K +
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENR-VKIGDFGLTKVLPQDKEXXKVK 174
Query: 171 EIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
E SP ++ APE L + G + ++ + S S RM+ D +
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 234
Query: 230 RIIAAQVVHPWLKESGEASDK---PIDTAVIFRMKQNTAMNK---LKKLALKWHSYDELR 283
++I ++ LK +G P + +I N +N+ + LAL+ D++R
Sbjct: 235 QMIVFHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR---VDQIR 290
Query: 284 EGSA 287
+ A
Sbjct: 291 DNMA 294
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 66/304 (21%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE 85
E H ++LG+G FG +C +++TG A K + S + ++D+E+ E+E
Sbjct: 12 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-----EIE 66
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV--------------NVCH---- 127
+++ S+ D IV A L++IM + + H
Sbjct: 67 ILK------SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLL 120
Query: 128 ------CRGV--------MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYR 170
C+G+ +HRDL N L +EN +K DFGL+ + K +
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENR-VKIGDFGLTKVLPQDKEXXKVK 177
Query: 171 EIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
E SP ++ APE L + G + ++ + S S RM+ D +
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 237
Query: 230 RIIAAQVVHPWLKESGEASDK---PIDTAVIFRMKQNTAMNK---LKKLALKWHSYDELR 283
++I ++ LK +G P + +I N +N+ + LAL+ D++R
Sbjct: 238 QMIVFHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR---VDQIR 293
Query: 284 EGSA 287
+ A
Sbjct: 294 DNMA 297
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 66/304 (21%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE 85
E H ++LG+G FG +C +++TG A K + S + ++D+E+ E+E
Sbjct: 12 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-----EIE 66
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV--------------NVCH---- 127
+++ S+ D IV A L++IM + + H
Sbjct: 67 ILK------SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 120
Query: 128 ------CRGV--------MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYR 170
C+G+ +HRDL N L +EN +K DFGL+ + K +
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENR-VKIGDFGLTKVLPQDKEXXKVK 177
Query: 171 EIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
E SP ++ APE L + G + ++ + S S RM+ D +
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 237
Query: 230 RIIAAQVVHPWLKESGEASDK---PIDTAVIFRMKQNTAMNK---LKKLALKWHSYDELR 283
++I ++ LK +G P + +I N +N+ + LAL+ D++R
Sbjct: 238 QMIVFHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR---VDQIR 293
Query: 284 EGSA 287
+ A
Sbjct: 294 DNMA 297
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTS 145
VM+Y + D + + +A ++I G+ H +G++H+D+KP N L T+
Sbjct: 86 VMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGL-EYLHSQGIVHKDIKPGNLLLTT 144
Query: 146 WDENALLKATDFGLSVF---FEEGKVYREIVGSPYYIAPEV 183
LK + G++ F R GSP + PE+
Sbjct: 145 ---GGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEI 182
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 66/304 (21%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE 85
E H ++LG+G FG +C +++TG A K + S + ++D+E+ E+E
Sbjct: 8 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-----EIE 62
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV--------------NVCH---- 127
+++ S+ D IV A L++IM + + H
Sbjct: 63 ILK------SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 116
Query: 128 ------CRGV--------MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYR 170
C+G+ +HRDL N L +EN +K DFGL+ + K +
Sbjct: 117 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENR-VKIGDFGLTKVLPQDKEXXKVK 173
Query: 171 EIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
E SP ++ APE L + G + ++ + S S RM+ D +
Sbjct: 174 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 233
Query: 230 RIIAAQVVHPWLKESGEASDK---PIDTAVIFRMKQNTAMNK---LKKLALKWHSYDELR 283
++I ++ LK +G P + +I N +N+ + LAL+ D++R
Sbjct: 234 QMIVFHLIE-LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR---VDQIR 289
Query: 284 EGSA 287
+ A
Sbjct: 290 DNMA 293
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 18/180 (10%)
Query: 105 GHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFE 164
G ++ +LR I + +HRDL N L S N + K +DFGLS F E
Sbjct: 111 GQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNS---NLVCKVSDFGLSRFLE 167
Query: 165 EGK---VYREIVGSPY---YIAPEVL-LQKMDQRVDA---AILKGEI-NFQRDPFPSASS 213
E Y +G + APE + +K DA I+ E+ +F P+ S+
Sbjct: 168 ENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 227
Query: 214 ----SAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQNTAMNKL 269
+AIE +R+ + ++ W K+ P + + +M +N A K+
Sbjct: 228 QDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPASLKI 287
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 41/220 (18%)
Query: 36 TIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS---- 91
T +E+G G+FG+ +L + + A K+I + + ++D E EVM LS
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKD-KVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKL 67
Query: 92 ---------GQPSILFDRIVARGHYS-----ERAAAAVLRVIMGVVNVCHCRG------V 131
P L + G S +R A ++ ++VC V
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 127
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL-LQK 187
+HRDL N L EN ++K +DFG++ F + + Y G+ + + +PEV +
Sbjct: 128 IHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSR 183
Query: 188 MDQRVDA---AILKGEINFQRDPFPSASSSAIELVHRMLT 224
+ D +L E+ F P + S E+V + T
Sbjct: 184 YSSKSDVWSFGVLMWEV-FSEGKIPYENRSNSEVVEDIST 222
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 123 VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVF---FEEGKVYREIVGSPYYI 179
++ H + ++HRD+K N E +K DFGL+ + + + GS ++
Sbjct: 145 MDYLHAKNIIHRDMKSNNIFL---HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWM 201
Query: 180 APEVL 184
APEV+
Sbjct: 202 APEVI 206
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 57/256 (22%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE 85
E H ++LG+G FG +C +++TG A K + S + ++D+E+ E+E
Sbjct: 7 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-----EIE 61
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV--------------NVCH---- 127
+++ S+ D IV A L++IM + + H
Sbjct: 62 ILK------SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 115
Query: 128 ------CRGV--------MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYR 170
C+G+ +HRDL N L +EN +K DFGL+ + K +
Sbjct: 116 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENR-VKIGDFGLTKVLPQDKEXXKVK 172
Query: 171 EIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
E SP ++ APE L + G + ++ + S S RM+ D +
Sbjct: 173 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 232
Query: 230 RIIAAQVVHPWLKESG 245
++I ++ LK +G
Sbjct: 233 QMIVFHLIE-LLKNNG 247
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 41/220 (18%)
Query: 36 TIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS---- 91
T +E+G G+FG+ +L + + A K+I + + ++D E EVM LS
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKD-KVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKL 64
Query: 92 ---------GQPSILFDRIVARGHYS-----ERAAAAVLRVIMGVVNVCHCRG------V 131
P L + G S +R A ++ ++VC V
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASV 124
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL-LQK 187
+HRDL N L EN ++K +DFG++ F + + Y G+ + + +PEV +
Sbjct: 125 IHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSR 180
Query: 188 MDQRVDA---AILKGEINFQRDPFPSASSSAIELVHRMLT 224
+ D +L E+ F P + S E+V + T
Sbjct: 181 YSSKSDVWSFGVLMWEV-FSEGKIPYENRSNSEVVEDIST 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 57/256 (22%)
Query: 32 ELHYTIGKELGRGEFGITYLC----TENSTGLQFACKSI--SKRKLVKDYEKDDVRGEVE 85
E H ++LG+G FG +C +++TG A K + S + ++D+E+ E+E
Sbjct: 27 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-----EIE 81
Query: 86 VMQYLSGQPSILFDRIVARGHYSERAAAAVLRVIMGVV--------------NVCH---- 127
+++ S+ D IV A L++IM + + H
Sbjct: 82 ILK------SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 135
Query: 128 ------CRGV--------MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK---VYR 170
C+G+ +HRDL N L +EN +K DFGL+ + K +
Sbjct: 136 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENR-VKIGDFGLTKVLPQDKEXXKVK 192
Query: 171 EIVGSP-YYIAPEVLLQKMDQRVDAAILKGEINFQRDPFPSASSSAIELVHRMLTQDPKR 229
E SP ++ APE L + G + ++ + S S RM+ D +
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 252
Query: 230 RIIAAQVVHPWLKESG 245
++I ++ LK +G
Sbjct: 253 QMIVFHLIE-LLKNNG 267
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 41/220 (18%)
Query: 36 TIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS---- 91
T +E+G G+FG+ +L + + A K+I + + ++D E EVM LS
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKD-KVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKL 64
Query: 92 ---------GQPSILFDRIVARGHYS-----ERAAAAVLRVIMGVVNVCHCRG------V 131
P L + G S +R A ++ ++VC V
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 124
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL-LQK 187
+HRDL N L EN ++K +DFG++ F + + Y G+ + + +PEV +
Sbjct: 125 IHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSR 180
Query: 188 MDQRVDA---AILKGEINFQRDPFPSASSSAIELVHRMLT 224
+ D +L E+ F P + S E+V + T
Sbjct: 181 YSSKSDVWSFGVLMWEV-FSEGKIPYENRSNSEVVEDIST 219
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 41/220 (18%)
Query: 36 TIGKELGRGEFGITYLCTENSTGLQFACKSISKRKLVKDYEKDDVRGEVEVMQYLS---- 91
T +E+G G+FG+ +L + + A K+I + + ++D E EVM LS
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKD-KVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKL 62
Query: 92 ---------GQPSILFDRIVARGHYS-----ERAAAAVLRVIMGVVNVCHCRG------V 131
P L + G S +R A ++ ++VC V
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 122
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL-LQK 187
+HRDL N L EN ++K +DFG++ F + + Y G+ + + +PEV +
Sbjct: 123 IHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSR 178
Query: 188 MDQRVDA---AILKGEINFQRDPFPSASSSAIELVHRMLT 224
+ D +L E+ F P + S E+V + T
Sbjct: 179 YSSKSDVWSFGVLMWEV-FSEGKIPYENRSNSEVVEDIST 217
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 131 VMHRDLKPENFLFTSWDENALL--KATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
++HRDL+ N S DENA + K DFGLS + ++G+ ++APE +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWMAPETI 198
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 132 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLA 187
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 230
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEE 165
+HRDL N L S N + K +DFGLS F EE
Sbjct: 140 VHRDLAARNILVNS---NLVCKVSDFGLSRFLEE 170
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 131 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLA 186
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 229
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 55/144 (38%), Gaps = 36/144 (25%)
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKV------------------ 168
H G++HRD+KP NFL+ + L DFGL+ + K+
Sbjct: 134 HQFGIVHRDVKPSNFLYNRRLKKYAL--VDFGLAQGTHDTKIELLKFVQSEAQQERCSQN 191
Query: 169 -------YREIV----GSPYYIAPEVLLQKMDQRVDAAILKGEINF-----QRDPFPSAS 212
R+ V G+P + APEVL + +Q + + F R PF AS
Sbjct: 192 KCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251
Query: 213 SSAIELVHRMLTQDPKRRIIAAQV 236
L M + + I AA+
Sbjct: 252 DDLTALAQIMTIRGSRETIQAAKT 275
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 65/172 (37%), Gaps = 29/172 (16%)
Query: 20 HDAILGRTYEDVELHYTIGKELGRGEFGITYL-CTENSTGLQFACKSISKRKL-VKDYEK 77
+ A+L T E T K +G GEFG Y + S+G + +I K + ++
Sbjct: 31 NQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQR 90
Query: 78 DDVRGEVEVMQYLSGQPSILFDRIVAR------------------------GHYSERAAA 113
D GE +M S I + ++++ G +S
Sbjct: 91 VDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLV 150
Query: 114 AVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE 165
+LR I + +HRDL N L S N + K +DFGLS E+
Sbjct: 151 GMLRGIAAGMKYLANMNYVHRDLAARNILVNS---NLVCKVSDFGLSRVLED 199
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 130 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 228
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 132 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 187
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 230
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 130 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 228
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 130 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 228
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 132 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 187
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 230
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 130 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 228
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 130 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 228
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 135 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 233
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 135 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 233
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 130 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 228
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 143 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 198
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 199 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 241
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 135 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 233
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 118 VIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY 177
+++G+ +V H GV+HRDL P N L +N + DF L+ V +
Sbjct: 143 ILLGL-HVLHEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADANKTHYVTHRW 198
Query: 178 YIAPEVLLQ 186
Y APE+++Q
Sbjct: 199 YRAPELVMQ 207
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 209 PSASSSAIELVHRMLTQDPKRRIIAAQVV-HPWLK 242
P+A A++L+ +ML +P+RRI Q + HP+ +
Sbjct: 287 PTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 118 VIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY 177
+++G+ +V H GV+HRDL P N L +N + DF L+ V +
Sbjct: 143 ILLGL-HVLHEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADANKTHYVTHRW 198
Query: 178 YIAPEVLLQ 186
Y APE+++Q
Sbjct: 199 YRAPELVMQ 207
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 209 PSASSSAIELVHRMLTQDPKRRIIAAQVV-HPWLK 242
P+A A++L+ +ML +P+RRI Q + HP+ +
Sbjct: 287 PTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 134 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 189
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 190 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 232
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 276 WHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
+ S ELR LG LT +Q ++ AD+DG+G ++Y E
Sbjct: 20 YISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 112 AAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGL-SVFFEEGKVYR 170
A + I V+ H + +++RDLKP N + +K DFGL + +GK R
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFLV---DTKQVKIGDFGLVTSLKNDGKRXR 180
Query: 171 EIVGSPYYIAPE 182
G+ Y++PE
Sbjct: 181 S-KGTLRYMSPE 191
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 135 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 233
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 278 SYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
S ELR LG LT +Q ++ AD+DG+G ++Y E
Sbjct: 27 SASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 67
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 131 VMHRDLKPENFLFTSWDENA-----LLKATDFGLSVFFEEGKVYREIVGSPYYIAPEVLL 185
++HRDLK N L EN +LK TDFGL+ + G+ ++APEV+
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR-TTKMSAAGAYAWMAPEVIR 187
Query: 186 QKM 188
M
Sbjct: 188 ASM 190
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 105 GHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFE 164
G ++ +LR I + G +HRDL N L S N + K +DFGLS E
Sbjct: 119 GQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLE 175
Query: 165 E 165
+
Sbjct: 176 D 176
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 276 WHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
+ S ELR LG LT +Q ++ AD+DG+G ++Y E
Sbjct: 99 YISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 141
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYR 170
A+ + + M +V + HRDLK +N L +N D GL+V +
Sbjct: 135 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTI 191
Query: 171 EI-----VGSPYYIAPEVL 184
+I VG+ Y+APEVL
Sbjct: 192 DIAPNHRVGTKRYMAPEVL 210
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYR 170
A+ + + M +V + HRDLK +N L +N D GL+V +
Sbjct: 148 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTI 204
Query: 171 EI-----VGSPYYIAPEVL 184
+I VG+ Y+APEVL
Sbjct: 205 DIAPNHRVGTKRYMAPEVL 223
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 105 GHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFE 164
G ++ +LR I + +HRDL N L S N + K +DFGLS F E
Sbjct: 130 GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNS---NLVCKVSDFGLSRFLE 186
Query: 165 E 165
+
Sbjct: 187 D 187
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYR 170
A+ + + M +V + HRDLK +N L +N D GL+V +
Sbjct: 115 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTI 171
Query: 171 EI-----VGSPYYIAPEVL 184
+I VG+ Y+APEVL
Sbjct: 172 DIAPNHRVGTKRYMAPEVL 190
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT Q ++ ADIDG+G ++Y E
Sbjct: 105 ELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEF 142
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYR 170
A+ + + M +V + HRDLK +N L +N D GL+V +
Sbjct: 112 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTI 168
Query: 171 EI-----VGSPYYIAPEVL 184
+I VG+ Y+APEVL
Sbjct: 169 DIAPNHRVGTKRYMAPEVL 187
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G + G+ + + APE L
Sbjct: 128 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLA 183
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ---VYELLEKD 226
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYR 170
A+ + + M +V + HRDLK +N L +N D GL+V +
Sbjct: 110 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTI 166
Query: 171 EI-----VGSPYYIAPEVL 184
+I VG+ Y+APEVL
Sbjct: 167 DIAPNHRVGTKRYMAPEVL 185
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 111 AAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYR 170
A+ + + M +V + HRDLK +N L +N D GL+V +
Sbjct: 109 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTI 165
Query: 171 EI-----VGSPYYIAPEVL 184
+I VG+ Y+APEVL
Sbjct: 166 DIAPNHRVGTKRYMAPEVL 184
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 276 WHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
+ S ELR LG LT Q ++ ADIDG+G ++Y E
Sbjct: 100 YISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEF 142
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 17/128 (13%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPID-----TAVI 257
F +D + ++ + V R L Q+P + + E D ID T +
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNP-----TEAELQDMINEVDADGDGTIDFPEFLTMMA 73
Query: 258 FRMKQNTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGN 310
+MK + +++ K + S ELR LG LT + ++ ADIDG+
Sbjct: 74 RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 133
Query: 311 GTIDYIEL 318
G ++Y E
Sbjct: 134 GQVNYEEF 141
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 114 AVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE 165
+LR I + G +HRDL N L S N + K +DFGLS E+
Sbjct: 151 GMLRGIASGMKYLSDMGAVHRDLAARNILINS---NLVCKVSDFGLSRVLED 199
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 29/149 (19%)
Query: 36 TIGKELGRGEFGITY---LCTENSTGLQFAC----------KSISKRKLVKDYEKDDVRG 82
+G+++GRG FG + L +N+ +C K + + +++K Y ++
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 83 EVEVMQYLSGQPSILFDRIVARGHYSE--RAAAAVLRV--IMGVVN-------VCHCRGV 131
+ V QP + +V G + R A LRV ++ +V +
Sbjct: 177 LIGVCT--QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS 160
+HRDL N L T E +LK +DFG+S
Sbjct: 235 IHRDLAARNCLVT---EKNVLKISDFGMS 260
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE 165
G +HRDL N L S N + K +DFGLS E+
Sbjct: 155 GYVHRDLAARNILINS---NLVCKVSDFGLSRVLED 187
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ ADIDG+G I+Y E
Sbjct: 29 ELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 66
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 29/149 (19%)
Query: 36 TIGKELGRGEFGITY---LCTENSTGLQFAC----------KSISKRKLVKDYEKDDVRG 82
+G+++GRG FG + L +N+ +C K + + +++K Y ++
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 83 EVEVMQYLSGQPSILFDRIVARGHYSE--RAAAAVLRV--IMGVVN-------VCHCRGV 131
+ V QP + +V G + R A LRV ++ +V +
Sbjct: 177 LIGVCT--QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLS 160
+HRDL N L T E +LK +DFG+S
Sbjct: 235 IHRDLAARNCLVT---EKNVLKISDFGMS 260
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE 165
G +HRDL N L S N + K +DFGLS E+
Sbjct: 138 GYVHRDLAARNILINS---NLVCKVSDFGLSRVLED 170
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 105 GHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFE 164
G ++ +LR I + G +HRDL N L S N + K +DFGLS E
Sbjct: 140 GQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNS---NLVCKVSDFGLSRVIE 196
Query: 165 E 165
+
Sbjct: 197 D 197
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE 165
G +HRDL N L S N + K +DFGLS E+
Sbjct: 138 GYVHRDLAARNILINS---NLVCKVSDFGLSRVLED 170
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ AD+DG+G I+Y E
Sbjct: 25 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 10/66 (15%)
Query: 127 HCRGVMHRDLKPENFLFTSWDENALLKATDFGL---SVFFEEGK---VYREIVGSPYYIA 180
H +G++H+DLK +N + +N + TDFGL S + G+ R G ++A
Sbjct: 147 HAKGILHKDLKSKNVFY----DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLA 202
Query: 181 PEVLLQ 186
PE++ Q
Sbjct: 203 PEIIRQ 208
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 113 AAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE 165
+LR I + G +HRDL N L S N + K +DFGLS E+
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLED 199
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 17/128 (13%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPID-----TAVI 257
F +D + ++ + V R L Q+P + + E D ID T +
Sbjct: 319 FDKDGDGTITTKELGTVMRSLGQNP-----TEAELQDMINEVDADGDGTIDFPEFLTMMA 373
Query: 258 FRMKQNTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGN 310
+MK + +++ K + S ELR LG LT + ++ ADIDG+
Sbjct: 374 RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 433
Query: 311 GTIDYIEL 318
G ++Y E
Sbjct: 434 GQVNYEEF 441
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 113 AAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE 165
+LR I + G +HRDL N L S N + K +DFGLS E+
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLED 199
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 9/124 (7%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G + +MK
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKD 78
Query: 263 NTAMNKLKKLALKWHSYD--------ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTID 314
+ KLK+ A + D ELR LG LT + ++ AD+DG+G ++
Sbjct: 79 TDSEEKLKE-AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVN 137
Query: 315 YIEL 318
Y E
Sbjct: 138 YEEF 141
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 113 AAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE 165
+LR I + G +HRDL N L S N + K +DFGLS E+
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLED 199
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 113 AAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE 165
+LR I + G +HRDL N L S N + K +DFGLS E+
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLED 199
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE 165
G +HRDL N L D N + K +DFGLS E+
Sbjct: 171 GYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLED 203
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 113 AAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE 165
+LR I + G +HRDL N L S N + K +DFGLS E+
Sbjct: 148 VGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLED 197
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 113 AAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE 165
+LR I + G +HRDL N L S N + K +DFGLS E+
Sbjct: 150 VGMLRGIASGMKYLSDMGFVHRDLAARNILINS---NLVCKVSDFGLSRVLED 199
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE 165
G +HRDL N L D N + K +DFGLS E+
Sbjct: 171 GYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLED 203
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HR+L N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 334 KNFIHRNLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 389
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 390 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 432
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 40/156 (25%)
Query: 115 VLRVIMGV---VNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEG----- 166
+L +++G+ + H +G HRDLKP N L + L+ + EG
Sbjct: 136 ILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQAL 195
Query: 167 --KVYREIVGSPYYIAPEVLLQK----MDQRVDA--------AILKGE----INFQR--- 205
+ + + Y APE+ + +D+R D A++ GE + FQ+
Sbjct: 196 TLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS 255
Query: 206 -----------DPFPSASSSAIELVHRMLTQDPKRR 230
P SS+ +L++ M+T DP +R
Sbjct: 256 VALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQR 291
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 131 VMHRDLKPENFLFTSWDENALL--KATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
++HRDL+ N S DENA + K DFG S + ++G+ ++APE +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNFQWMAPETI 198
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 113 AAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEE 165
+LR I + G +HRDL N L S N + K +DFGLS E+
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLED 199
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 276 WHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
+ S ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 100 YISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HR+L N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 337 KNFIHRNLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 392
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 393 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 435
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 30 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 67
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 31.2 bits (69), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 283 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 342
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 343 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 402
Query: 316 IEL 318
E
Sbjct: 403 EEF 405
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 23 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 286 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 345
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 346 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 405
Query: 316 IEL 318
E
Sbjct: 406 EEF 408
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 286 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 345
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 346 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 405
Query: 316 IEL 318
E
Sbjct: 406 EEF 408
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 26 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 379
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 380 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 439
Query: 316 IEL 318
E
Sbjct: 440 EEF 442
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 29 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 66
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 321 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 380
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 381 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 440
Query: 316 IEL 318
E
Sbjct: 441 EEF 443
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 379
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 380 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 439
Query: 316 IEL 318
E
Sbjct: 440 EEF 442
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 27 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 50 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 87
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNY 139
Query: 316 IEL 318
E
Sbjct: 140 EEF 142
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 79 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNY 138
Query: 316 IEL 318
E
Sbjct: 139 EEF 141
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ AD+DG+G I+Y E
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEF 142
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 26 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HR+L N L EN L+K DFGLS G Y G+ + + APE L
Sbjct: 376 KNFIHRNLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 431
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 432 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 474
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 16 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 75
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 76 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 135
Query: 316 IEL 318
E
Sbjct: 136 EEF 138
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 15 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 74
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 75 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 134
Query: 316 IEL 318
E
Sbjct: 135 EEF 137
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 131 VMHRDLKPENFLFTSWDENALL--KATDFGLSVFFEEGKVYREIVGSPYYIAPEVL 184
++HRDL+ N S DENA + K DF LS + ++G+ ++APE +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLGNFQWMAPETI 198
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 18 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 77
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 78 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 137
Query: 316 IEL 318
E
Sbjct: 138 EEF 140
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 276 WHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
+ S ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 99 YISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 17 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 76
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 77 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 136
Query: 316 IEL 318
E
Sbjct: 137 EEF 139
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ AD+DG+G I+Y E
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 142
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 79 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 138
Query: 316 IEL 318
E
Sbjct: 139 EEF 141
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 17/128 (13%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPID-----TAVI 257
F +D + ++ + V R L Q+P + + E D ID T +
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNP-----TEAELQDMINEVDADGDGTIDFPEFLTMMA 374
Query: 258 FRMKQNTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGN 310
+MK + +++ K + S ELR LG LT + ++ ADIDG+
Sbjct: 375 RKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 434
Query: 311 GTIDYIEL 318
G ++Y E
Sbjct: 435 GQVNYEEF 442
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 17/128 (13%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPID-----TAVI 257
F +D + ++ + V R L Q+P + + E D ID T +
Sbjct: 319 FDKDGDGTITTKELGTVMRSLGQNP-----TEAELQDMINEVDADGDGTIDFPEFLTMMA 373
Query: 258 FRMKQNTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGN 310
+MK + +++ K + S ELR LG LT + ++ ADIDG+
Sbjct: 374 RKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 433
Query: 311 GTIDYIEL 318
G ++Y E
Sbjct: 434 GQVNYEEF 441
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 17 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 76
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 77 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 136
Query: 316 IEL 318
E
Sbjct: 137 EEF 139
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 104 ELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ ADIDG+G I+Y E
Sbjct: 104 ELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 141
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 30.8 bits (68), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ ADIDG+G I+Y E
Sbjct: 104 ELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 141
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 276 WHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
+ S ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 100 YISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 25 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 84
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 85 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 144
Query: 316 IEL 318
E
Sbjct: 145 EEF 147
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 79 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 138
Query: 316 IEL 318
E
Sbjct: 139 EEF 141
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
Query: 316 IEL 318
E
Sbjct: 140 EEF 142
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 9/124 (7%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 263 NTAMNKLKKLALKWHSYD--------ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTID 314
+ ++++ A + D ELR LG LT + ++ ADIDG+G ++
Sbjct: 79 TDSEEEIRE-AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 137
Query: 315 YIEL 318
Y E
Sbjct: 138 YEEF 141
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 20 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 79
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 80 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
Query: 316 IEL 318
E
Sbjct: 140 EEF 142
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 17 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 76
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 77 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 136
Query: 316 IEL 318
E
Sbjct: 137 EEF 139
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 276 WHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
+ S ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 101 YISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 143
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 17/128 (13%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPID-----TAVI 257
F +D + ++ + V R L Q+P + + E D ID T +
Sbjct: 319 FDKDGDGTITTKELGTVMRSLGQNP-----TEAELQDMINEVDADGDGTIDFPEFLTMMA 373
Query: 258 FRMKQNTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGN 310
+MK + +++ K + S ELR LG LT + ++ ADIDG+
Sbjct: 374 RKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 433
Query: 311 GTIDYIEL 318
G ++Y E
Sbjct: 434 GQVNYEEF 441
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 276 WHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
+ S ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 103 YISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 145
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 320 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKY 379
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ ADIDG+G ++Y
Sbjct: 380 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 439
Query: 316 IEL 318
E
Sbjct: 440 EEF 442
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTSW--DENALLKATDFGLSVFFEEGKV-----YRE 171
++ + H + +++RD+KPENFL + ++ DFGL+ + + + YRE
Sbjct: 106 LLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYRE 165
Query: 172 ---IVGSPYYIAPEVLLQKMDQRVD 193
+ G+ Y++ L K R D
Sbjct: 166 HKSLTGTARYMSINTHLGKEQSRRD 190
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 36/220 (16%)
Query: 36 TIGKELGRGEFGITYLCTENSTGLQFACKSISKRKL-VKDYEKDD-VRGEVE---VMQYL 90
T+ +LG G+FG Y L A K++ + + V+++ K+ V E++ ++Q L
Sbjct: 14 TMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 91 S----GQPSILFDRIVARGHY-------SERAAAAVLRVIMGV-----VNVCHCRGVMHR 134
P + + G+ + + +AV+ + M + + +HR
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 135 DLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL-LQKMDQ 190
DL N L EN L+K DFGLS G G+ + + APE L K
Sbjct: 134 DLAARNCLV---GENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 191 RVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
+ D +L EI + P+P S V+ +L +D
Sbjct: 190 KSDVWAFGVLLWEIATYGMSPYPGIDPSQ---VYELLEKD 226
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 9/124 (7%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 263 NTAMNKLKKLALKWHSYD--------ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTID 314
+ ++++ A + D ELR LG LT + ++ ADIDG+G ++
Sbjct: 79 TDSEEEIRE-AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 137
Query: 315 YIEL 318
Y E
Sbjct: 138 YEEF 141
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 102 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 139
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G G+ + + APE L
Sbjct: 128 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 183
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ---VYELLEKD 226
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 278 SYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
S ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 393 SAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 433
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 107 YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLF--TSWDENALLKATDFGLSVFFE 164
+S + + ++ + H + +++RD+KPENFL ++ DFGL+ +
Sbjct: 102 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYI 161
Query: 165 EGKV-----YRE---IVGSPYYIAPEVLLQKMDQRVD 193
+ + YRE + G+ Y++ L K R D
Sbjct: 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRD 198
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR +LG L+ + ++AAD DG+G ++Y E
Sbjct: 104 ELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEF 141
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 9/124 (7%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G D P ++ R +
Sbjct: 16 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG-TIDFPEFLNLMARKMK 74
Query: 263 NTAMNKLKKLALKWHSYD--------ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTID 314
+T + K A + D ELR LG LT + ++ AD+DG+G ++
Sbjct: 75 DTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVN 134
Query: 315 YIEL 318
Y E
Sbjct: 135 YEEF 138
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ ADIDG+G ++Y E
Sbjct: 405 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 442
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 12/96 (12%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+ +HRDL N L EN ++K DFGLS G Y G+ + + APE L
Sbjct: 149 KNFIHRDLAARNCLV---GENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 204
Query: 186 Q-----KMDQRVDAAILKGEINFQRDPFPSASSSAI 216
K D +L + P+P S +
Sbjct: 205 YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 240
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 9/124 (7%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G D P ++ R +
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG-TIDFPEFLNLMARKMK 77
Query: 263 NTAMNKLKKLALKWHSYD--------ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTID 314
+T + K A + D ELR LG LT + ++ AD+DG+G ++
Sbjct: 78 DTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVN 137
Query: 315 YIEL 318
Y E
Sbjct: 138 YEEF 141
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G G+ + + APE L
Sbjct: 131 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 186
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 229
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVL- 184
+ +HRDL N L EN L+K DFGLS G G+ + + APE L
Sbjct: 135 KNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 190
Query: 185 LQKMDQRVDA---AILKGEI-NFQRDPFPSASSSAIELVHRMLTQD 226
K + D +L EI + P+P S V+ +L +D
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKD 233
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 105 GHYSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFE 164
G ++ +LR I + +HR L N L S N + K +DFGLS F E
Sbjct: 104 GQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNS---NLVCKVSDFGLSRFLE 160
Query: 165 E 165
+
Sbjct: 161 D 161
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Query: 130 GVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYR---------EIVGSPYYIA 180
+ HRDL N L + + +DFGLS+ ++ R VG+ Y+A
Sbjct: 140 AISHRDLNSRNVLVKN---DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMA 196
Query: 181 PEVLLQKMDQRVDAAILK 198
PEVL ++ R + LK
Sbjct: 197 PEVLEGAVNLRDXESALK 214
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + Y G+ + + APE L
Sbjct: 385 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 437
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
ELR LG LT + ++ +DIDG+G ++Y E
Sbjct: 105 ELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEF 142
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + Y G+ + + APE L
Sbjct: 302 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 354
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + Y G+ + + APE L
Sbjct: 302 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 354
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + Y G+ + + APE L
Sbjct: 302 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 354
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 280 DELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
DE R+G AKLG L A+ + D +G+GT+D E
Sbjct: 57 DEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + Y G+ + + APE L
Sbjct: 136 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 188
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + Y G+ + + APE L
Sbjct: 136 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 188
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + Y G+ + + APE L
Sbjct: 136 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 188
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + Y G+ + + APE L
Sbjct: 136 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 188
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + Y G+ + + APE L
Sbjct: 136 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 188
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 281 ELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+LR LG LT + ++ ADIDG+G ++Y
Sbjct: 28 DLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 62
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + Y G+ + + APE L
Sbjct: 133 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 185
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + Y G+ + + APE L
Sbjct: 136 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 188
>pdb|4FGW|A Chain A, Structure Of Glycerol-3-phosphate Dehydrogenase, Gpd1,
From Sacharomyces Cerevisiae
pdb|4FGW|B Chain B, Structure Of Glycerol-3-phosphate Dehydrogenase, Gpd1,
From Sacharomyces Cerevisiae
Length = 391
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 210 SASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQNTAMNKL 269
++ A E +L + +I + VH WL+ G D P+ AV + N M L
Sbjct: 320 TSGKDAWECEKELLNGQSAQGLITCKEVHEWLETCGSVEDFPLFEAVYQIVYNNYPMKNL 379
Query: 270 KKL 272
+
Sbjct: 380 PDM 382
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + Y G+ + + APE L
Sbjct: 129 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 181
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 203 FQRDPFPSASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQ 262
F +D + ++ + V R L Q+P + + +G T + +MK
Sbjct: 19 FDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD 78
Query: 263 NTAMNKLK-------KLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDY 315
+ +++ K + S ELR LG LT + ++ A+IDG+G ++Y
Sbjct: 79 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNY 138
Query: 316 IEL 318
E
Sbjct: 139 EEF 141
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + Y G+ + + APE L
Sbjct: 127 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 179
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + Y G+ + + APE L
Sbjct: 125 VHRDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 177
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 10/81 (12%)
Query: 123 VNVCHCRGVMHRDLKPENFLF--TSWDENALLKATDFGLSVFFEEGKV-----YRE---I 172
+ H + +++RD+KPENFL + DFGL+ + + + YRE +
Sbjct: 113 MEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSL 172
Query: 173 VGSPYYIAPEVLLQKMDQRVD 193
G+ Y++ L K R D
Sbjct: 173 TGTARYMSINTHLGKEQSRRD 193
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 276 WHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
+ S ELR LG LT + ++ A+IDG+G ++Y E
Sbjct: 94 YISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEF 136
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 276 WHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
+ S D +RE A+L TL+ + + D DG+GT+D+ E
Sbjct: 107 YISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 149
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 24/90 (26%)
Query: 119 IMGVVNVCHCRGVMHRDLKPENFLFTS-WDENAL---------------------LKATD 156
I+ +N + H DLKPEN L + E +L +K D
Sbjct: 146 ILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLID 205
Query: 157 FGLSVFFEEGKVYREIVGSPYYIAPEVLLQ 186
FG + F + + I+ + Y APEV+L
Sbjct: 206 FGCATF--KSDYHGSIINTRQYRAPEVILN 233
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK-VYREIVGSPY-YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + R+ P + APE L
Sbjct: 133 VHRDLRAANILV---GENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAAL 185
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK-VYREIVGSPY-YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + R+ P + APE L
Sbjct: 136 VHRDLRAANILV---GENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAAL 188
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGK-VYREIVGSPY-YIAPEVLL 185
+HRDL+ N L EN + K DFGL+ E+ + R+ P + APE L
Sbjct: 126 VHRDLRAANILV---GENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAAL 178
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 107 YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFL 142
+S + + ++ + H + +++RD+KPENFL
Sbjct: 123 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFL 158
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 12/52 (23%)
Query: 129 RGVMHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPYYIA 180
R +HRDL N L EN ++K DFGLS R I + YY A
Sbjct: 193 RKFVHRDLATRNCLV---GENMVVKIADFGLS---------RNIYSADYYKA 232
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 107 YSERAAAAVLRVIMGVVNVCHCRGVMHRDLKPENFL 142
+S + + ++ + H + +++RD+KPENFL
Sbjct: 102 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFL 137
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 276 WHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
+ S D +RE A+L TL+ + + D DG+GT+D+ E
Sbjct: 19 YISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 278 SYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
+ DELR A LG L ++ AD+D +G ++Y E
Sbjct: 24 TVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 132 MHRDLKPENFLFTSWDENALLKATDFGLSVFFEEGKVYREIVGSPY---YIAPEVLL 185
+HRDL N L EN + K DFGL+ E+ + Y G+ + + APE L
Sbjct: 136 VHRDLAAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 188
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 265 AMNKLKKLALKWHSYDELREGSAKLGSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
++K KK +K D LR LG LT + + D DG+GT+DY E
Sbjct: 15 VLDKEKKGVIK---VDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 10/119 (8%)
Query: 210 SASSSAIELVHRMLTQDPKRRIIAAQVVHPWLKESGEASDKPIDTAVIFRMKQNTAMNKL 269
S S+ + V RML Q+P + + SG ++ MK ++
Sbjct: 35 SISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSE 94
Query: 270 KKLALKWHSYDELREGSAKL----------GSTLTGFNAKQYMQAADIDGNGTIDYIEL 318
++L+ + +D+ +G L G T+T + ++ M+ D + +G IDY E
Sbjct: 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,460,756
Number of Sequences: 62578
Number of extensions: 389285
Number of successful extensions: 3247
Number of sequences better than 100.0: 926
Number of HSP's better than 100.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 282
Number of HSP's that attempted gapping in prelim test: 1436
Number of HSP's gapped (non-prelim): 1364
length of query: 318
length of database: 14,973,337
effective HSP length: 99
effective length of query: 219
effective length of database: 8,778,115
effective search space: 1922407185
effective search space used: 1922407185
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)