BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043233
MMMFLAFSRSSLSLFFFVISIFSLSFWSFSTVVESHTAIDVCDSKHRPVSCPVKCFTTDP
VCGMDGVTYWCGCDEARCAGATVAKKGFCQVGDNGGTASLSAQALLLVHIVWLIIIGISV
LFGLF

High Scoring Gene Products

Symbol, full name Information P value
AT4G01575 protein from Arabidopsis thaliana 2.3e-16
AT3G61980 protein from Arabidopsis thaliana 4.7e-16

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043233
        (125 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2831620 - symbol:AT4G01575 "AT4G01575" species...   203  2.3e-16   1
TAIR|locus:2079547 - symbol:AT3G61980 "AT3G61980" species...   200  4.7e-16   1


>TAIR|locus:2831620 [details] [associations]
            symbol:AT4G01575 "AT4G01575" species:3702 "Arabidopsis
            thaliana" [GO:0004867 "serine-type endopeptidase inhibitor
            activity" evidence=ISS] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009507 "chloroplast" evidence=ISM]
            InterPro:IPR002350 SMART:SM00280 EMBL:CP002687 GO:GO:0006508
            GO:GO:0008233 UniGene:At.28284 UniGene:At.66612 IPI:IPI00548817
            RefSeq:NP_567214.1 ProteinModelPortal:F4JG23 SMR:F4JG23
            EnsemblPlants:AT4G01575.1 GeneID:828124 KEGG:ath:AT4G01575
            OMA:CGCADAL Uniprot:F4JG23
        Length = 144

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 39/86 (45%), Positives = 46/86 (53%)

Query:    40 DVCDSKHRPVSCPVKCFTTDPVCGMDGVTYWCGCDEARCAGATVAKKGFCQVGDNGGTAS 99
             + C+   +P SCPV+CF  DPVCG D VTYWCGC +A C G  V K+G C VG NG   S
Sbjct:    60 EFCEGIAKPASCPVQCFRPDPVCGEDSVTYWCGCADALCHGVRVVKQGACDVG-NGVGLS 118

Query:   100 LSAQAXXXXXXXXXXXXXXXXXFGLF 125
             +  QA                 FGLF
Sbjct:   119 VPGQALLLIHIVWMMLLGFSILFGLF 144


>TAIR|locus:2079547 [details] [associations]
            symbol:AT3G61980 "AT3G61980" species:3702 "Arabidopsis
            thaliana" [GO:0004867 "serine-type endopeptidase inhibitor
            activity" evidence=ISS] [GO:0008150 "biological_process"
            evidence=ND] [GO:0031225 "anchored to membrane" evidence=TAS]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0010200 "response
            to chitin" evidence=RCA] InterPro:IPR002350 SMART:SM00280
            GO:GO:0005886 EMBL:CP002686 GO:GO:0031225 GO:GO:0006508
            GO:GO:0008233 EMBL:AL138642 EMBL:AY065130 EMBL:AY114578
            IPI:IPI00518035 PIR:T47990 RefSeq:NP_567123.1 UniGene:At.28584
            ProteinModelPortal:Q9M267 SMR:Q9M267 EnsemblPlants:AT3G61980.1
            GeneID:825371 KEGG:ath:AT3G61980 TAIR:At3g61980 InParanoid:Q9M267
            OMA:DAACHGA PhylomeDB:Q9M267 ProtClustDB:CLSN2917490
            ArrayExpress:Q9M267 Genevestigator:Q9M267 Uniprot:Q9M267
        Length = 117

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 36/65 (55%), Positives = 40/65 (61%)

Query:    40 DVCDSKHRPVSCPVKCFTTDPVCGMDGVTYWCGCDEARCAGATVAKKGFCQVGDNGGTAS 99
             DVC        C + CF  DPVCG DGVTYWCGC +A C GA V KKG C  G N G+AS
Sbjct:    33 DVCPRVKDRGGCTINCFRADPVCGTDGVTYWCGCPDAACHGARVVKKGACDTG-NAGSAS 91

Query:   100 LSAQA 104
             +  QA
Sbjct:    92 VPGQA 96


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.135   0.462    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      125        81   0.00091  102 3  11 22  0.38    29
                                                     29  0.42    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  556 (59 KB)
  Total size of DFA:  115 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.33u 0.11s 8.44t   Elapsed:  00:00:00
  Total cpu time:  8.33u 0.11s 8.44t   Elapsed:  00:00:00
  Start:  Mon May 20 20:09:16 2013   End:  Mon May 20 20:09:16 2013

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