BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043233
(125 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O00468|AGRIN_HUMAN Agrin OS=Homo sapiens GN=AGRN PE=1 SV=5
Length = 2067
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 43 DSKHRPVSCPVKCFTT--DPVCGMDGVTYWCGCD--EARCA---GATVAKKGFCQ 90
DS+ P C C + PVCG DGVTY C+ +ARC G VA +G C+
Sbjct: 697 DSEDGPCVCDFSCQSVPGSPVCGSDGVTYSTECELKKARCESQRGLYVAAQGACR 751
Score = 32.7 bits (73), Expect = 0.59, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 47 RPVSCPVKCFTTDPVCGMDGVTYWCGCDEARCAGA 81
RP SCP + PVCG DGVTY C R A
Sbjct: 345 RPESCPAR---QAPVCGDDGVTYENDCVMGRSGAA 376
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 59 DPVCGMDGVTYWCGCDEARCAGA-----TVAKKGFC 89
DPVCG DGVTY C+ A VA+KG C
Sbjct: 499 DPVCGSDGVTYGSACELEATACTLGREIQVARKGPC 534
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 60 PVCGMDGVTYWCGCD--EARCAGATV---AKKGFCQ 90
PVCG DGVTY C+ EA C T A+ G C+
Sbjct: 630 PVCGSDGVTYGSACELREAACLQQTQIEEARAGPCE 665
Score = 28.9 bits (63), Expect = 10.0, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 41 VCDSKHRPVSCPVKCFT-TDPVCGMDGVTYWCGC 73
+C+++ CP +C PVCG DG TY C
Sbjct: 545 LCEAETGRCVCPSECVALAQPVCGSDGHTYPSEC 578
>sp|P25304|AGRIN_RAT Agrin OS=Rattus norvegicus GN=Agrn PE=1 SV=2
Length = 1959
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 43 DSKHRPVSCPVKCFTT--DPVCGMDGVTYWCGCD--EARCAGAT---VAKKGFCQ 90
DS+ P C C + PVCG DGVTY CD +ARC VA +G C+
Sbjct: 592 DSEDGPCVCDFSCQSVPRSPVCGSDGVTYGTECDLKKARCESQQELYVAAQGACR 646
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 10/53 (18%)
Query: 47 RPVSCPVKCFTTDPVCGMDGVTYWCGCDEARCAGATVA------KKGFCQVGD 93
RP +CP + P+CG DGVTY C +R GAT + G CQ D
Sbjct: 240 RPENCPAQ---HTPICGDDGVTYENDCVMSRI-GATRGLLLQKVRSGQCQTRD 288
Score = 29.6 bits (65), Expect = 5.0, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 41 VCDSKHRPVSCPVKCFTT---DPVCGMDGVTYWCGCDEARCAGA-----TVAKKGFC 89
VC K+ C + + DPVCG DGVTY C+ A VA++G C
Sbjct: 373 VCTVKNGKAECECQRVCSGIYDPVCGSDGVTYGSVCELESMACTLGREIQVARRGPC 429
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 8/57 (14%)
Query: 41 VCDSKHRPVSCPVKCF-TTDPVCGMDGVTYWCGCDEARCAGAT------VAKKGFCQ 90
+C+ + CP +C + PVCG DG TY C E T VA G CQ
Sbjct: 440 LCEVETGRCVCPSECVESAQPVCGSDGHTYASEC-ELHVHACTHQISLYVASAGHCQ 495
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Query: 60 PVCGMDGVTYWCGCD--EARC 78
PVCG DGVTY C+ EA C
Sbjct: 525 PVCGSDGVTYLSACELREAAC 545
>sp|A2ASQ1|AGRIN_MOUSE Agrin OS=Mus musculus GN=Agrn PE=1 SV=1
Length = 1950
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 43 DSKHRPVSCPVKCFTT--DPVCGMDGVTYWCGC--DEARCAGAT---VAKKGFCQ 90
DS+ P C C + PVCG DGVTY C +ARC VA +G C+
Sbjct: 592 DSEDGPCVCDFSCQSVLKSPVCGSDGVTYSTECHLKKARCEARQELYVAAQGACR 646
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 47 RPVSCPVKCFTTDPVCGMDGVTYWCGCDEARCAGA-----TVAKKGFCQVGD 93
RP +CP + P+CG DGVTY C +R A + G CQ D
Sbjct: 240 RPENCPAQ---HTPICGDDGVTYENDCVMSRIGAARGLLLQKVRSGQCQTRD 288
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 8/57 (14%)
Query: 41 VCDSKHRPVSCPVKCF-TTDPVCGMDGVTYWCGCDEARCAGAT------VAKKGFCQ 90
+C+ + CP +C + PVCG DG TY C E T VA G CQ
Sbjct: 440 LCEVETGRCVCPSECVESAQPVCGSDGHTYASEC-ELHVHACTHQISLYVASAGHCQ 495
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Query: 60 PVCGMDGVTYWCGCD--EARC 78
PVCG DGVTY C+ EA C
Sbjct: 525 PVCGSDGVTYLSACELREAAC 545
Score = 28.9 bits (63), Expect = 9.1, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 59 DPVCGMDGVTYWCGCDEARCAGA-----TVAKKGFC 89
DPVCG DGVTY C+ A VA++G C
Sbjct: 394 DPVCGSDGVTYGSVCELESMACTLGREIRVARRGPC 429
>sp|P31696|AGRIN_CHICK Agrin OS=Gallus gallus GN=AGRN PE=1 SV=3
Length = 2081
Score = 33.1 bits (74), Expect = 0.52, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 41 VCDSKHRPVSCPVKCF-TTDPVCGMDGVTYWCGCD 74
+C+++ CP +C ++ PVCG DG TY C+
Sbjct: 547 ICEAETGRCVCPTECVPSSQPVCGTDGNTYGSECE 581
Score = 32.7 bits (73), Expect = 0.74, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 47 RPVSCPVKCFTTDPVCGMDGVTYWCGCDEARCA---GATVAK--KGFCQVGD 93
RP +CP K +PVCG DGVTY C R G + K G CQ D
Sbjct: 347 RPENCPSK---REPVCGDDGVTYASECVMGRTGAIRGLEIQKVRSGQCQHQD 395
>sp|P98158|LRP2_RAT Low-density lipoprotein receptor-related protein 2 OS=Rattus
norvegicus GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 32.3 bits (72), Expect = 0.79, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 42 CDSKHR-PVSCPVKCFTTDPVCGMDGVTYWCGCDEARCAGATVAKKGFCQVGDNGGTASL 100
CD+ PV+ P C C G Y+ + +C ++ +C+VG + G
Sbjct: 4369 CDAASELPVTMPPPC-----RCMHGGNCYFDENELPKCKCSSGYSGEYCEVGLSRGIPPG 4423
Query: 101 SAQALLLVHIVWLIIIGISVLFGLF 125
+ A+LL ++ +II+G VL GLF
Sbjct: 4424 TTMAVLLTFVI-VIIVGALVLVGLF 4447
>sp|P80424|LDTI_HIRME Leech-derived tryptase inhibitor C OS=Hirudo medicinalis PE=1
SV=1
Length = 46
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 59 DPVCGMDGVTYWCGCDEARCAGATVAKKGFCQVG 92
PVCG DG TY C ARC G ++ +G C G
Sbjct: 11 KPVCGSDGRTYANSCI-ARCNGVSIKSEGSCPTG 43
>sp|A2ARV4|LRP2_MOUSE Low-density lipoprotein receptor-related protein 2 OS=Mus musculus
GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 42 CDSKHR-PVSCPVKCFTTDPVCGMDGVTYWCGCDEARCAGATVAKKGFCQVGDNGGTASL 100
CD+ P++ P C C G Y+ D +C ++ +C++G + G
Sbjct: 4369 CDAASELPITMPSPC-----RCMHGGSCYFDENDLPKCKCSSGYSGEYCEIGLSRGIPPG 4423
Query: 101 SAQALLLVHIVWLIIIGISVLFGLF 125
+ ALLL +II+G VL G F
Sbjct: 4424 TTMALLLT-FAMVIIVGALVLVGFF 4447
>sp|Q6GMI0|HTR1A_DANRE Serine protease HTRA1A OS=Danio rerio GN=htra1a PE=2 SV=1
Length = 479
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 55 CFTTDPVCGMDGVTYWCGCDEARCA 79
C ++DPVCG DGV+Y C+ R +
Sbjct: 110 CKSSDPVCGSDGVSYRDICELKRVS 134
>sp|Q8HYW2|SO3A1_BOVIN Solute carrier organic anion transporter family member 3A1 OS=Bos
taurus GN=SLCO3A1 PE=2 SV=1
Length = 710
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 37 TAIDVCDSKHRPVSCPVKCFTTDPVCGMDGVTYWCGC 73
+A+D S ++ C FT PVCG DG+TY C
Sbjct: 463 SALDPYSSCNKNCECQTDSFT--PVCGADGITYLSAC 497
>sp|Q9H2Y9|SO5A1_HUMAN Solute carrier organic anion transporter family member 5A1 OS=Homo
sapiens GN=SLCO5A1 PE=2 SV=2
Length = 848
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 49 VSCPVKCFTTDPVCGMDGVTYWCGC 73
V+C K +PVCG DG+TY+ C
Sbjct: 557 VNCGCKIHEYEPVCGSDGITYFNPC 581
>sp|Q16270|IBP7_HUMAN Insulin-like growth factor-binding protein 7 OS=Homo sapiens
GN=IGFBP7 PE=1 SV=1
Length = 282
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 9/47 (19%)
Query: 55 CFTTDPVCGMDGVTYWCGCD--------EARCAGA-TVAKKGFCQVG 92
C + PVCG DG TY GC E+R A T KG C+ G
Sbjct: 113 CKSRYPVCGSDGTTYPSGCQLRAASQRAESRGEKAITQVSKGTCEQG 159
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.140 0.467
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,844,811
Number of Sequences: 539616
Number of extensions: 1466964
Number of successful extensions: 5006
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 4953
Number of HSP's gapped (non-prelim): 70
length of query: 125
length of database: 191,569,459
effective HSP length: 92
effective length of query: 33
effective length of database: 141,924,787
effective search space: 4683517971
effective search space used: 4683517971
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)