Query 043239
Match_columns 286
No_of_seqs 216 out of 1718
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 04:20:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043239.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043239hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2n_A D-isomer specific 2-hyd 100.0 5.2E-61 1.8E-65 443.5 27.1 272 13-286 37-315 (345)
2 4dgs_A Dehydrogenase; structur 100.0 6E-61 2.1E-65 442.3 21.9 270 13-286 39-310 (340)
3 3kb6_A D-lactate dehydrogenase 100.0 8.8E-61 3E-65 441.0 18.9 240 46-286 40-298 (334)
4 4e5n_A Thermostable phosphite 100.0 1.2E-59 4E-64 433.0 24.8 272 13-286 11-296 (330)
5 3jtm_A Formate dehydrogenase, 100.0 2E-59 6.7E-64 434.1 24.0 269 16-286 31-309 (351)
6 3k5p_A D-3-phosphoglycerate de 100.0 2E-58 6.9E-63 434.0 26.4 270 13-286 24-301 (416)
7 2pi1_A D-lactate dehydrogenase 100.0 3.9E-59 1.3E-63 430.0 17.5 264 18-286 16-298 (334)
8 1sc6_A PGDH, D-3-phosphoglycer 100.0 7.5E-58 2.6E-62 431.0 25.4 267 15-286 15-290 (404)
9 3hg7_A D-isomer specific 2-hyd 100.0 2.4E-58 8.1E-63 422.4 20.8 260 17-286 18-283 (324)
10 3gg9_A D-3-phosphoglycerate de 100.0 6.7E-58 2.3E-62 424.2 23.9 264 19-286 22-304 (352)
11 3evt_A Phosphoglycerate dehydr 100.0 1.2E-58 4.1E-63 424.8 17.1 236 46-286 38-280 (324)
12 4hy3_A Phosphoglycerate oxidor 100.0 1.8E-57 6.2E-62 422.3 20.4 266 14-286 45-318 (365)
13 2yq5_A D-isomer specific 2-hyd 100.0 3.4E-57 1.2E-61 417.7 18.5 244 42-286 39-302 (343)
14 2cuk_A Glycerate dehydrogenase 100.0 2E-55 6.9E-60 402.0 28.3 269 13-286 9-281 (311)
15 2nac_A NAD-dependent formate d 100.0 1.1E-55 3.8E-60 413.9 25.2 246 41-286 82-336 (393)
16 2j6i_A Formate dehydrogenase; 100.0 3.6E-56 1.2E-60 414.8 21.5 268 17-286 30-315 (364)
17 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 6.9E-56 2.4E-60 408.4 23.1 244 39-286 58-307 (335)
18 1j4a_A D-LDH, D-lactate dehydr 100.0 3.3E-56 1.1E-60 410.9 19.5 243 42-286 40-301 (333)
19 3ba1_A HPPR, hydroxyphenylpyru 100.0 1.7E-55 5.7E-60 405.7 24.0 270 13-286 32-303 (333)
20 3pp8_A Glyoxylate/hydroxypyruv 100.0 7.9E-56 2.7E-60 404.8 21.5 232 47-286 40-282 (315)
21 1gdh_A D-glycerate dehydrogena 100.0 4.9E-55 1.7E-59 400.9 26.5 271 14-286 11-290 (320)
22 1xdw_A NAD+-dependent (R)-2-hy 100.0 1.4E-55 4.8E-60 406.3 22.6 246 40-286 37-301 (331)
23 1wwk_A Phosphoglycerate dehydr 100.0 3E-55 1E-59 400.2 24.1 244 40-286 36-285 (307)
24 1dxy_A D-2-hydroxyisocaproate 100.0 7.1E-56 2.4E-60 408.5 18.7 243 42-286 38-299 (333)
25 1mx3_A CTBP1, C-terminal bindi 100.0 3.4E-54 1.2E-58 398.8 25.5 267 17-286 35-313 (347)
26 2ekl_A D-3-phosphoglycerate de 100.0 2.1E-54 7E-59 395.7 23.0 241 40-286 38-287 (313)
27 3oet_A Erythronate-4-phosphate 100.0 4.9E-54 1.7E-58 400.1 18.2 242 17-286 15-261 (381)
28 1qp8_A Formate dehydrogenase; 100.0 3.1E-53 1E-57 386.1 20.5 234 45-286 28-264 (303)
29 3gvx_A Glycerate dehydrogenase 100.0 6.5E-53 2.2E-57 381.1 21.0 227 44-285 30-258 (290)
30 2gcg_A Glyoxylate reductase/hy 100.0 5.3E-52 1.8E-56 382.4 24.1 270 15-286 19-299 (330)
31 2dbq_A Glyoxylate reductase; D 100.0 3.4E-52 1.2E-56 384.3 22.6 269 15-286 13-292 (334)
32 2d0i_A Dehydrogenase; structur 100.0 4E-52 1.4E-56 383.6 19.6 267 13-286 11-288 (333)
33 2w2k_A D-mandelate dehydrogena 100.0 3.7E-51 1.3E-55 379.2 22.6 265 17-286 19-308 (348)
34 1ygy_A PGDH, D-3-phosphoglycer 100.0 1.6E-50 5.4E-55 393.8 25.9 265 14-286 14-284 (529)
35 2o4c_A Erythronate-4-phosphate 100.0 1.1E-51 3.6E-56 385.1 16.5 220 46-286 35-258 (380)
36 1v8b_A Adenosylhomocysteinase; 100.0 5.1E-31 1.7E-35 251.6 -0.1 192 68-284 191-395 (479)
37 3d64_A Adenosylhomocysteinase; 100.0 5.7E-31 1.9E-35 252.1 -0.7 190 69-284 212-412 (494)
38 3d4o_A Dipicolinate synthase s 99.9 8.3E-28 2.8E-32 217.5 9.5 186 42-262 52-268 (293)
39 2rir_A Dipicolinate synthase, 99.9 2.9E-24 1E-28 194.7 9.5 173 42-239 54-250 (300)
40 3ce6_A Adenosylhomocysteinase; 99.8 1.4E-22 4.9E-27 194.5 0.1 196 69-285 209-418 (494)
41 2vhw_A Alanine dehydrogenase; 99.8 6.2E-21 2.1E-25 178.2 9.0 245 7-285 12-303 (377)
42 1x13_A NAD(P) transhydrogenase 99.7 4.6E-18 1.6E-22 159.9 5.1 224 8-242 20-301 (401)
43 3h9u_A Adenosylhomocysteinase; 99.7 4.6E-17 1.6E-21 153.1 8.8 179 48-248 122-312 (436)
44 1l7d_A Nicotinamide nucleotide 99.7 1.8E-16 6.2E-21 148.2 10.6 228 8-241 13-302 (384)
45 2eez_A Alanine dehydrogenase; 99.7 9.4E-17 3.2E-21 149.4 7.4 217 7-235 12-266 (369)
46 3n58_A Adenosylhomocysteinase; 99.6 2.6E-16 9.1E-21 147.9 8.9 150 77-247 191-347 (464)
47 4gbj_A 6-phosphogluconate dehy 99.6 4.6E-16 1.6E-20 140.7 8.0 128 149-276 6-138 (297)
48 3obb_A Probable 3-hydroxyisobu 99.6 1.4E-16 4.9E-21 144.3 4.1 128 149-276 4-138 (300)
49 1gtm_A Glutamate dehydrogenase 99.6 5.4E-17 1.9E-21 153.0 -3.2 130 143-283 206-341 (419)
50 3gvp_A Adenosylhomocysteinase 99.6 8.1E-15 2.8E-19 137.6 9.3 149 77-246 164-319 (435)
51 4dll_A 2-hydroxy-3-oxopropiona 99.5 6.5E-15 2.2E-19 134.3 5.2 122 145-266 28-155 (320)
52 3l6d_A Putative oxidoreductase 99.5 1.7E-14 5.7E-19 130.8 7.3 125 144-268 5-134 (306)
53 3qsg_A NAD-binding phosphogluc 99.5 4.3E-14 1.5E-18 128.5 9.4 139 126-266 2-150 (312)
54 3doj_A AT3G25530, dehydrogenas 99.5 3.1E-14 1E-18 129.2 6.8 124 143-266 16-146 (310)
55 3qha_A Putative oxidoreductase 99.5 5.3E-14 1.8E-18 126.8 8.2 118 148-267 15-137 (296)
56 4e21_A 6-phosphogluconate dehy 99.5 1.1E-13 3.9E-18 128.1 8.8 124 146-271 20-151 (358)
57 3pef_A 6-phosphogluconate dehy 99.4 1.2E-13 4.1E-18 123.7 8.2 118 149-266 2-126 (287)
58 3g0o_A 3-hydroxyisobutyrate de 99.4 6.8E-14 2.3E-18 126.4 4.8 120 148-267 7-134 (303)
59 3pdu_A 3-hydroxyisobutyrate de 99.4 1.2E-13 4.2E-18 123.7 6.1 117 149-265 2-125 (287)
60 4ezb_A Uncharacterized conserv 99.4 1.3E-12 4.4E-17 119.0 11.2 134 124-265 4-151 (317)
61 2h78_A Hibadh, 3-hydroxyisobut 99.4 5.5E-13 1.9E-17 120.1 6.3 115 149-263 4-125 (302)
62 4gwg_A 6-phosphogluconate dehy 99.3 8.2E-13 2.8E-17 126.7 7.2 120 148-268 4-136 (484)
63 2zyd_A 6-phosphogluconate dehy 99.3 2.1E-12 7.3E-17 123.9 7.6 120 146-266 13-144 (480)
64 1gpj_A Glutamyl-tRNA reductase 99.3 1E-13 3.5E-18 130.4 -3.1 164 69-237 80-268 (404)
65 2p4q_A 6-phosphogluconate dehy 99.3 7.4E-12 2.5E-16 120.6 8.8 117 149-266 11-140 (497)
66 3ggo_A Prephenate dehydrogenas 99.2 1.8E-11 6.2E-16 111.3 9.8 117 145-265 30-156 (314)
67 2d5c_A AROE, shikimate 5-dehyd 99.2 8.1E-12 2.8E-16 110.6 7.0 177 35-255 40-224 (263)
68 1vpd_A Tartronate semialdehyde 99.2 4.6E-12 1.6E-16 113.6 5.4 115 149-263 6-127 (299)
69 1yb4_A Tartronic semialdehyde 99.2 1.4E-11 5E-16 110.0 8.1 108 149-257 4-118 (295)
70 2pv7_A T-protein [includes: ch 99.2 8.4E-11 2.9E-15 105.9 12.1 108 124-248 4-112 (298)
71 3cky_A 2-hydroxymethyl glutara 99.2 1.3E-11 4.4E-16 110.8 6.7 109 149-257 5-120 (301)
72 2g5c_A Prephenate dehydrogenas 99.2 3.5E-11 1.2E-15 107.0 8.9 133 149-285 2-149 (281)
73 4dio_A NAD(P) transhydrogenase 99.2 1.4E-10 4.6E-15 108.5 12.7 97 145-242 187-321 (405)
74 2pgd_A 6-phosphogluconate dehy 99.2 4.1E-11 1.4E-15 115.1 9.1 116 149-265 3-131 (482)
75 2uyy_A N-PAC protein; long-cha 99.2 2.4E-11 8.3E-16 109.9 7.0 115 149-263 31-152 (316)
76 3dtt_A NADP oxidoreductase; st 99.2 9.3E-12 3.2E-16 109.1 4.0 93 142-237 13-126 (245)
77 2iz1_A 6-phosphogluconate dehy 99.2 2.1E-11 7.2E-16 116.9 6.7 116 149-265 6-133 (474)
78 2gf2_A Hibadh, 3-hydroxyisobut 99.2 2.2E-11 7.5E-16 109.0 6.3 106 149-254 1-113 (296)
79 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.2 2.8E-11 9.7E-16 116.1 6.9 116 149-265 2-133 (478)
80 2cvz_A Dehydrogenase, 3-hydrox 99.2 3.5E-11 1.2E-15 107.1 6.6 104 149-255 2-110 (289)
81 2hk9_A Shikimate dehydrogenase 99.2 1.3E-11 4.5E-16 110.1 3.7 179 34-255 50-237 (275)
82 4e12_A Diketoreductase; oxidor 99.1 1E-10 3.5E-15 104.6 8.0 112 149-263 5-146 (283)
83 1c1d_A L-phenylalanine dehydro 99.1 1E-10 3.6E-15 107.7 8.1 103 145-255 172-280 (355)
84 3p2y_A Alanine dehydrogenase/p 99.1 8.5E-11 2.9E-15 109.1 6.9 220 8-241 35-310 (381)
85 3ktd_A Prephenate dehydrogenas 99.1 5.1E-11 1.7E-15 109.5 4.4 130 148-282 8-152 (341)
86 3b1f_A Putative prephenate deh 99.1 1.7E-10 5.8E-15 103.0 7.3 102 148-251 6-117 (290)
87 1i36_A Conserved hypothetical 99.0 1.7E-10 5.8E-15 101.6 6.3 98 149-252 1-105 (264)
88 3ond_A Adenosylhomocysteinase; 99.0 4.1E-10 1.4E-14 107.4 7.8 142 77-238 209-355 (488)
89 1np3_A Ketol-acid reductoisome 99.0 2.7E-10 9.1E-15 104.6 5.8 89 145-235 13-107 (338)
90 2raf_A Putative dinucleotide-b 99.0 7.2E-10 2.5E-14 94.8 7.7 79 145-239 16-94 (209)
91 2yjz_A Metalloreductase steap4 98.5 4.5E-11 1.5E-15 101.9 0.0 90 146-240 17-110 (201)
92 3fr7_A Putative ketol-acid red 99.0 4.2E-10 1.4E-14 106.9 6.2 92 143-237 48-156 (525)
93 3d1l_A Putative NADP oxidoredu 99.0 1.6E-10 5.6E-15 101.9 3.2 98 143-242 5-109 (266)
94 2dpo_A L-gulonate 3-dehydrogen 99.0 3.3E-10 1.1E-14 103.2 5.2 113 148-263 6-148 (319)
95 3pid_A UDP-glucose 6-dehydroge 99.0 6E-10 2E-14 105.3 6.4 121 141-265 29-181 (432)
96 2q3e_A UDP-glucose 6-dehydroge 98.9 4.4E-10 1.5E-14 107.4 5.3 105 149-253 6-149 (467)
97 1zej_A HBD-9, 3-hydroxyacyl-CO 98.9 5.5E-10 1.9E-14 100.5 4.1 110 146-263 10-132 (293)
98 2f1k_A Prephenate dehydrogenas 98.9 1.4E-09 5E-14 96.3 6.4 99 149-250 1-106 (279)
99 3k6j_A Protein F01G10.3, confi 98.9 9.8E-10 3.4E-14 104.5 5.1 151 101-264 13-192 (460)
100 2izz_A Pyrroline-5-carboxylate 98.9 3.7E-09 1.3E-13 96.2 8.5 102 146-251 20-132 (322)
101 3oj0_A Glutr, glutamyl-tRNA re 98.9 1.5E-09 5.2E-14 87.0 5.3 85 148-238 21-113 (144)
102 4a7p_A UDP-glucose dehydrogena 98.9 9.7E-09 3.3E-13 97.5 11.6 103 149-252 9-146 (446)
103 3gg2_A Sugar dehydrogenase, UD 98.9 5.7E-09 1.9E-13 99.3 9.3 102 149-251 3-138 (450)
104 3gt0_A Pyrroline-5-carboxylate 98.8 1.7E-09 5.8E-14 94.5 4.7 99 149-251 3-111 (247)
105 1y81_A Conserved hypothetical 98.8 6.5E-09 2.2E-13 83.3 7.5 103 146-255 12-118 (138)
106 3c24_A Putative oxidoreductase 98.8 2.2E-09 7.5E-14 95.8 4.5 88 149-239 12-105 (286)
107 1f0y_A HCDH, L-3-hydroxyacyl-C 98.8 5.1E-09 1.7E-13 94.2 6.2 112 149-263 16-161 (302)
108 1leh_A Leucine dehydrogenase; 98.8 4.6E-09 1.6E-13 97.2 5.9 102 145-254 170-278 (364)
109 1mv8_A GMD, GDP-mannose 6-dehy 98.8 6.1E-09 2.1E-13 98.6 6.8 102 149-251 1-140 (436)
110 2rcy_A Pyrroline carboxylate r 98.8 8.6E-09 2.9E-13 90.4 7.2 99 148-252 4-106 (262)
111 3tri_A Pyrroline-5-carboxylate 98.8 6.9E-09 2.3E-13 92.6 6.1 100 148-251 3-112 (280)
112 2vns_A Metalloreductase steap3 98.8 3E-09 1E-13 91.2 3.6 90 147-241 27-121 (215)
113 2ahr_A Putative pyrroline carb 98.8 7.3E-09 2.5E-13 90.9 6.1 96 149-252 4-105 (259)
114 2i99_A MU-crystallin homolog; 98.8 5.1E-09 1.8E-13 94.9 5.0 105 147-260 134-248 (312)
115 1pjc_A Protein (L-alanine dehy 98.7 5.2E-08 1.8E-12 90.0 10.6 218 7-236 12-268 (361)
116 2duw_A Putative COA-binding pr 98.7 9.1E-09 3.1E-13 83.1 4.8 104 148-258 13-122 (145)
117 1yqg_A Pyrroline-5-carboxylate 98.7 8E-09 2.7E-13 90.6 3.6 95 149-252 1-103 (263)
118 1ks9_A KPA reductase;, 2-dehyd 98.7 2.9E-08 9.8E-13 87.9 7.1 87 149-237 1-99 (291)
119 3k96_A Glycerol-3-phosphate de 98.7 6E-08 2E-12 89.5 9.3 92 148-241 29-139 (356)
120 2dc1_A L-aspartate dehydrogena 98.7 7.4E-08 2.5E-12 83.6 9.3 99 149-255 1-104 (236)
121 1bg6_A N-(1-D-carboxylethyl)-L 98.7 3.1E-08 1.1E-12 90.5 7.1 101 149-252 5-125 (359)
122 2y0c_A BCEC, UDP-glucose dehyd 98.7 3.1E-08 1.1E-12 94.9 7.4 103 148-251 8-144 (478)
123 3g79_A NDP-N-acetyl-D-galactos 98.7 4.4E-08 1.5E-12 93.7 8.3 99 149-248 19-160 (478)
124 1x0v_A GPD-C, GPDH-C, glycerol 98.6 4.3E-08 1.5E-12 89.7 7.7 90 148-239 8-128 (354)
125 1dlj_A UDP-glucose dehydrogena 98.6 4.2E-08 1.4E-12 92.0 7.2 101 149-252 1-134 (402)
126 1yj8_A Glycerol-3-phosphate de 98.6 2.5E-08 8.5E-13 92.4 5.4 87 149-237 22-143 (375)
127 2o3j_A UDP-glucose 6-dehydroge 98.6 3.4E-08 1.2E-12 94.7 6.4 104 149-253 10-154 (481)
128 4huj_A Uncharacterized protein 98.6 3.3E-08 1.1E-12 84.9 5.6 87 148-238 23-116 (220)
129 1txg_A Glycerol-3-phosphate de 98.6 3E-08 1E-12 89.9 5.3 100 149-251 1-124 (335)
130 3ojo_A CAP5O; rossmann fold, c 98.6 5E-08 1.7E-12 92.2 6.9 106 146-251 9-145 (431)
131 3don_A Shikimate dehydrogenase 98.6 6.4E-08 2.2E-12 86.3 7.0 106 145-255 114-228 (277)
132 1evy_A Glycerol-3-phosphate de 98.6 1E-08 3.5E-13 94.5 1.8 89 150-239 17-128 (366)
133 2c2x_A Methylenetetrahydrofola 98.6 1.7E-07 5.9E-12 83.2 9.3 81 143-239 153-236 (281)
134 1edz_A 5,10-methylenetetrahydr 98.6 1E-07 3.5E-12 86.4 7.6 91 142-238 171-278 (320)
135 3dfu_A Uncharacterized protein 98.6 5.1E-08 1.7E-12 84.7 5.3 70 148-235 6-75 (232)
136 1b0a_A Protein (fold bifunctio 98.6 1.4E-07 4.8E-12 84.0 8.2 80 143-238 154-234 (288)
137 3mog_A Probable 3-hydroxybutyr 98.6 2.7E-08 9.1E-13 95.4 3.7 113 149-266 6-148 (483)
138 3l07_A Bifunctional protein fo 98.6 1.8E-07 6.1E-12 83.3 8.8 80 143-238 156-236 (285)
139 3p2o_A Bifunctional protein fo 98.5 1.9E-07 6.4E-12 83.2 8.7 80 143-238 155-235 (285)
140 3ngx_A Bifunctional protein fo 98.5 1.6E-07 5.5E-12 83.1 8.1 77 146-238 148-225 (276)
141 2egg_A AROE, shikimate 5-dehyd 98.5 9.8E-08 3.3E-12 85.9 6.9 106 145-255 138-258 (297)
142 4a26_A Putative C-1-tetrahydro 98.5 1.5E-07 5.2E-12 84.3 8.0 79 144-238 161-242 (300)
143 1z82_A Glycerol-3-phosphate de 98.5 4.1E-08 1.4E-12 89.5 4.4 96 148-250 14-127 (335)
144 1jay_A Coenzyme F420H2:NADP+ o 98.5 3E-08 1E-12 84.1 3.3 111 149-266 1-136 (212)
145 1a4i_A Methylenetetrahydrofola 98.5 3.1E-07 1.1E-11 82.3 9.6 81 143-239 160-241 (301)
146 2ew2_A 2-dehydropantoate 2-red 98.5 4.3E-08 1.5E-12 87.7 4.0 103 149-254 4-126 (316)
147 4a5o_A Bifunctional protein fo 98.5 2.4E-07 8.2E-12 82.5 8.6 80 143-238 156-236 (286)
148 1zcj_A Peroxisomal bifunctiona 98.5 8.8E-08 3E-12 91.4 5.8 112 148-263 37-175 (463)
149 3u62_A Shikimate dehydrogenase 98.5 1.8E-07 6E-12 82.4 6.3 100 146-252 107-214 (253)
150 1wdk_A Fatty oxidation complex 98.4 7.8E-08 2.7E-12 96.4 3.2 113 148-264 314-455 (715)
151 3phh_A Shikimate dehydrogenase 98.4 3E-07 1E-11 81.6 5.1 104 148-255 118-226 (269)
152 2wtb_A MFP2, fatty acid multif 98.4 2E-07 6.8E-12 93.6 4.3 112 149-264 313-453 (725)
153 1iuk_A Hypothetical protein TT 98.3 1.7E-06 5.9E-11 69.1 8.3 103 148-257 13-121 (140)
154 1vl6_A Malate oxidoreductase; 98.3 4E-06 1.4E-10 77.6 11.6 91 143-238 187-297 (388)
155 2i76_A Hypothetical protein; N 98.3 7.1E-08 2.4E-12 85.6 -0.4 82 149-238 3-92 (276)
156 3ulk_A Ketol-acid reductoisome 98.3 5.9E-07 2E-11 84.1 5.7 89 145-237 34-133 (491)
157 2d59_A Hypothetical protein PH 98.3 2.9E-06 1E-10 68.1 8.8 104 148-258 22-129 (144)
158 3hdj_A Probable ornithine cycl 98.3 2.4E-06 8.3E-11 77.4 8.9 83 148-238 121-216 (313)
159 3i83_A 2-dehydropantoate 2-red 98.2 3.8E-06 1.3E-10 75.9 9.8 104 149-255 3-124 (320)
160 2qyt_A 2-dehydropantoate 2-red 98.2 3.3E-07 1.1E-11 82.2 2.1 99 149-251 9-132 (317)
161 3ghy_A Ketopantoate reductase 98.2 8.1E-07 2.8E-11 80.9 4.3 105 148-255 3-142 (335)
162 2qrj_A Saccharopine dehydrogen 98.2 1.3E-06 4.3E-11 81.3 5.6 83 147-235 213-300 (394)
163 3hn2_A 2-dehydropantoate 2-red 98.2 5.9E-06 2E-10 74.4 9.6 104 149-256 3-123 (312)
164 3hwr_A 2-dehydropantoate 2-red 98.2 1.6E-06 5.4E-11 78.5 5.7 100 146-250 17-134 (318)
165 2z2v_A Hypothetical protein PH 98.2 9.1E-07 3.1E-11 81.8 4.1 103 146-255 14-127 (365)
166 1x7d_A Ornithine cyclodeaminas 98.2 2.9E-06 1E-10 78.0 7.0 87 147-237 128-228 (350)
167 3c85_A Putative glutathione-re 98.1 6.4E-07 2.2E-11 74.2 2.3 89 144-234 35-138 (183)
168 2g1u_A Hypothetical protein TM 98.1 4.6E-06 1.6E-10 67.2 7.0 94 143-238 14-121 (155)
169 4fgw_A Glycerol-3-phosphate de 98.1 5E-06 1.7E-10 77.4 7.0 86 150-237 36-153 (391)
170 3c7a_A Octopine dehydrogenase; 98.1 2.4E-06 8.2E-11 79.6 4.6 84 149-234 3-115 (404)
171 3ic5_A Putative saccharopine d 98.0 3.3E-06 1.1E-10 64.0 4.3 84 147-235 4-100 (118)
172 3o8q_A Shikimate 5-dehydrogena 98.0 2.4E-06 8.4E-11 76.2 3.9 105 145-254 123-238 (281)
173 2a9f_A Putative malic enzyme ( 98.0 2.3E-05 8E-10 72.6 10.5 119 93-239 156-293 (398)
174 1lss_A TRK system potassium up 98.0 4.2E-06 1.4E-10 65.4 4.8 85 148-234 4-102 (140)
175 3ado_A Lambda-crystallin; L-gu 98.0 4.2E-06 1.4E-10 76.0 5.4 115 148-265 6-150 (319)
176 3g17_A Similar to 2-dehydropan 98.0 1.1E-06 3.7E-11 78.6 0.8 88 149-238 3-99 (294)
177 1omo_A Alanine dehydrogenase; 98.0 1.3E-05 4.3E-10 72.8 7.8 83 147-237 124-219 (322)
178 1p77_A Shikimate 5-dehydrogena 98.0 2.4E-06 8.1E-11 75.7 2.8 105 145-252 116-231 (272)
179 2ewd_A Lactate dehydrogenase,; 98.0 5.8E-06 2E-10 74.7 5.3 100 148-249 4-135 (317)
180 3pwz_A Shikimate dehydrogenase 98.0 9.6E-06 3.3E-10 72.0 6.1 105 144-252 116-231 (272)
181 3fwz_A Inner membrane protein 97.9 3E-06 1E-10 67.2 2.6 84 148-233 7-103 (140)
182 4b4u_A Bifunctional protein fo 97.9 3.1E-05 1.1E-09 69.2 9.1 78 143-236 174-252 (303)
183 1nyt_A Shikimate 5-dehydrogena 97.9 1.5E-05 5.2E-10 70.4 6.8 105 145-254 116-231 (271)
184 2hmt_A YUAA protein; RCK, KTN, 97.9 8.2E-06 2.8E-10 63.9 3.8 91 146-238 4-107 (144)
185 3jyo_A Quinate/shikimate dehyd 97.9 3.1E-05 1.1E-09 69.0 7.8 104 145-252 124-245 (283)
186 2dvm_A Malic enzyme, 439AA lon 97.9 3.7E-05 1.3E-09 72.5 8.6 106 143-253 181-312 (439)
187 1pzg_A LDH, lactate dehydrogen 97.9 2.1E-05 7E-10 71.7 6.7 111 148-258 9-157 (331)
188 3uuw_A Putative oxidoreductase 97.8 3.2E-05 1.1E-09 69.2 7.3 103 148-255 6-119 (308)
189 3llv_A Exopolyphosphatase-rela 97.8 9.7E-06 3.3E-10 64.0 3.0 86 147-234 5-103 (141)
190 1hyh_A L-hicdh, L-2-hydroxyiso 97.8 1.3E-05 4.3E-10 72.2 4.0 61 149-210 2-80 (309)
191 3tnl_A Shikimate dehydrogenase 97.8 4.2E-05 1.5E-09 69.2 7.4 105 145-252 151-279 (315)
192 3vtf_A UDP-glucose 6-dehydroge 97.8 1.7E-05 5.7E-10 75.0 4.8 101 147-247 20-156 (444)
193 1tlt_A Putative oxidoreductase 97.8 8.2E-05 2.8E-09 66.9 8.9 103 149-256 6-119 (319)
194 3fbt_A Chorismate mutase and s 97.7 2.8E-05 9.6E-10 69.3 5.4 103 145-254 119-231 (282)
195 1nvt_A Shikimate 5'-dehydrogen 97.7 9.4E-06 3.2E-10 72.3 2.3 105 145-254 125-247 (287)
196 2hjr_A Malate dehydrogenase; m 97.7 6.3E-05 2.2E-09 68.4 7.4 108 149-258 15-156 (328)
197 4hkt_A Inositol 2-dehydrogenas 97.7 5.1E-05 1.7E-09 68.6 6.6 101 149-255 4-116 (331)
198 3qy9_A DHPR, dihydrodipicolina 97.7 9.7E-05 3.3E-09 64.4 8.1 81 149-237 4-85 (243)
199 3euw_A MYO-inositol dehydrogen 97.7 5.5E-05 1.9E-09 68.8 6.8 101 149-254 5-117 (344)
200 3db2_A Putative NADPH-dependen 97.7 5.4E-05 1.9E-09 69.1 6.6 100 149-253 6-117 (354)
201 1j5p_A Aspartate dehydrogenase 97.7 0.00019 6.5E-09 62.8 9.5 101 146-255 10-114 (253)
202 3ego_A Probable 2-dehydropanto 97.7 2.7E-05 9.4E-10 70.0 4.3 101 149-255 3-118 (307)
203 2ho3_A Oxidoreductase, GFO/IDH 97.7 6.6E-05 2.3E-09 67.7 6.7 101 149-254 2-114 (325)
204 1a5z_A L-lactate dehydrogenase 97.6 3.5E-05 1.2E-09 69.8 4.7 107 149-257 1-140 (319)
205 3q2i_A Dehydrogenase; rossmann 97.6 4.8E-05 1.6E-09 69.5 5.5 63 148-210 13-86 (354)
206 1t2d_A LDH-P, L-lactate dehydr 97.6 8.3E-05 2.8E-09 67.4 7.0 58 149-207 5-80 (322)
207 2glx_A 1,5-anhydro-D-fructose 97.6 6.6E-05 2.3E-09 67.7 6.3 102 149-255 1-115 (332)
208 3c1a_A Putative oxidoreductase 97.6 3.6E-05 1.2E-09 69.2 4.4 102 149-255 11-122 (315)
209 3evn_A Oxidoreductase, GFO/IDH 97.6 0.00023 7.9E-09 64.3 9.7 103 148-255 5-120 (329)
210 1guz_A Malate dehydrogenase; o 97.6 7.5E-05 2.6E-09 67.3 5.9 60 149-209 1-79 (310)
211 3e9m_A Oxidoreductase, GFO/IDH 97.6 0.00012 4.2E-09 66.1 7.3 103 148-255 5-120 (330)
212 2v6b_A L-LDH, L-lactate dehydr 97.6 5.4E-05 1.8E-09 68.1 4.8 107 149-257 1-138 (304)
213 3ezy_A Dehydrogenase; structur 97.6 0.00013 4.4E-09 66.3 7.4 101 149-254 3-116 (344)
214 1npy_A Hypothetical shikimate 97.6 0.00012 4E-09 64.9 6.7 102 147-255 118-231 (271)
215 1xea_A Oxidoreductase, GFO/IDH 97.5 0.00013 4.4E-09 65.7 6.9 102 149-255 3-116 (323)
216 1f06_A MESO-diaminopimelate D- 97.5 0.00025 8.5E-09 64.1 8.5 100 149-253 4-110 (320)
217 3ff4_A Uncharacterized protein 97.5 0.00017 5.9E-09 56.1 6.4 102 149-258 5-110 (122)
218 2nu8_A Succinyl-COA ligase [AD 97.5 0.00033 1.1E-08 62.5 9.1 105 148-256 7-118 (288)
219 3bio_A Oxidoreductase, GFO/IDH 97.5 0.00026 8.9E-09 63.5 8.4 101 148-254 9-118 (304)
220 3cea_A MYO-inositol 2-dehydrog 97.5 0.00013 4.5E-09 66.1 6.5 103 148-255 8-125 (346)
221 3abi_A Putative uncharacterize 97.5 0.00011 3.8E-09 67.5 5.9 63 147-210 15-88 (365)
222 3t4e_A Quinate/shikimate dehyd 97.5 0.00022 7.6E-09 64.4 7.7 104 145-252 145-273 (312)
223 3e18_A Oxidoreductase; dehydro 97.5 0.00017 5.9E-09 66.0 6.7 64 148-211 5-77 (359)
224 1id1_A Putative potassium chan 97.5 0.00029 1E-08 56.2 7.3 84 148-233 3-103 (153)
225 3rc1_A Sugar 3-ketoreductase; 97.4 0.00014 4.7E-09 66.5 5.9 103 148-255 27-142 (350)
226 3l4b_C TRKA K+ channel protien 97.4 8.1E-05 2.8E-09 63.2 3.6 64 149-212 1-78 (218)
227 1oi7_A Succinyl-COA synthetase 97.4 0.00056 1.9E-08 61.0 9.1 106 148-257 7-119 (288)
228 2p2s_A Putative oxidoreductase 97.4 0.00058 2E-08 61.7 9.2 63 149-211 5-78 (336)
229 2i6t_A Ubiquitin-conjugating e 97.4 0.00022 7.7E-09 64.1 6.3 113 148-262 14-156 (303)
230 3tum_A Shikimate dehydrogenase 97.4 0.00018 6E-09 63.7 5.5 107 145-252 122-241 (269)
231 3dfz_A SIRC, precorrin-2 dehyd 97.4 0.00013 4.3E-09 62.9 4.3 90 140-235 23-121 (223)
232 1lld_A L-lactate dehydrogenase 97.4 0.00016 5.6E-09 64.8 5.3 90 147-238 6-127 (319)
233 3ec7_A Putative dehydrogenase; 97.3 0.0003 1E-08 64.4 6.6 64 148-211 23-99 (357)
234 3e82_A Putative oxidoreductase 97.3 0.00037 1.3E-08 63.9 7.0 102 149-255 8-120 (364)
235 3fef_A Putative glucosidase LP 97.3 0.00014 4.8E-09 68.9 4.1 109 147-256 4-167 (450)
236 1ldn_A L-lactate dehydrogenase 97.3 0.00021 7.2E-09 64.5 5.0 63 148-210 6-85 (316)
237 3f4l_A Putative oxidoreductase 97.3 0.00049 1.7E-08 62.5 7.2 63 149-211 3-77 (345)
238 3m2t_A Probable dehydrogenase; 97.3 0.00041 1.4E-08 63.5 6.7 101 148-253 5-119 (359)
239 2axq_A Saccharopine dehydrogen 97.2 0.00021 7.2E-09 68.0 4.6 105 143-253 18-136 (467)
240 1y6j_A L-lactate dehydrogenase 97.2 0.00059 2E-08 61.7 7.4 114 148-262 7-154 (318)
241 2i6u_A Otcase, ornithine carba 97.2 0.01 3.6E-07 53.2 15.3 146 72-242 96-275 (307)
242 3zwc_A Peroxisomal bifunctiona 97.2 0.00034 1.2E-08 70.2 6.1 113 149-265 317-456 (742)
243 1ur5_A Malate dehydrogenase; o 97.2 0.00034 1.2E-08 62.9 5.6 59 149-208 3-79 (309)
244 2fp4_A Succinyl-COA ligase [GD 97.2 0.0011 3.7E-08 59.7 8.7 107 145-256 10-126 (305)
245 3gvi_A Malate dehydrogenase; N 97.2 0.00039 1.3E-08 63.1 5.8 110 147-258 6-149 (324)
246 3nep_X Malate dehydrogenase; h 97.2 0.00041 1.4E-08 62.7 5.8 110 149-258 1-143 (314)
247 3l9w_A Glutathione-regulated p 97.2 0.00014 4.8E-09 68.2 2.7 84 148-233 4-100 (413)
248 4f2g_A Otcase 1, ornithine car 97.2 0.0068 2.3E-07 54.4 13.5 131 89-242 118-274 (309)
249 3qvo_A NMRA family protein; st 97.2 0.00071 2.4E-08 57.7 6.7 92 146-239 21-128 (236)
250 1jw9_B Molybdopterin biosynthe 97.1 7.6E-05 2.6E-09 65.2 0.4 79 144-223 27-144 (249)
251 3r6d_A NAD-dependent epimerase 97.1 0.0012 4E-08 55.6 7.8 86 149-238 6-110 (221)
252 2ef0_A Ornithine carbamoyltran 97.1 0.0026 8.9E-08 57.0 10.3 154 63-243 95-272 (301)
253 3kux_A Putative oxidoreductase 97.1 0.00086 2.9E-08 61.1 7.4 101 149-254 8-119 (352)
254 3mz0_A Inositol 2-dehydrogenas 97.1 0.00022 7.6E-09 64.7 3.4 101 149-254 3-118 (344)
255 1obb_A Maltase, alpha-glucosid 97.1 0.00062 2.1E-08 64.9 6.4 110 148-258 3-174 (480)
256 3ohs_X Trans-1,2-dihydrobenzen 97.1 0.0011 3.6E-08 60.0 7.6 101 149-254 3-118 (334)
257 1dxh_A Ornithine carbamoyltran 97.1 0.0053 1.8E-07 55.8 12.1 149 62-236 94-275 (335)
258 1ydw_A AX110P-like protein; st 97.1 0.00076 2.6E-08 61.6 6.7 103 149-256 7-125 (362)
259 2vt3_A REX, redox-sensing tran 97.1 0.00051 1.8E-08 58.7 5.1 62 149-210 86-156 (215)
260 1oju_A MDH, malate dehydrogena 97.1 0.00068 2.3E-08 60.6 6.1 110 149-261 1-148 (294)
261 3p7m_A Malate dehydrogenase; p 97.0 0.00091 3.1E-08 60.5 6.7 109 147-258 4-147 (321)
262 3fhl_A Putative oxidoreductase 97.0 0.0013 4.5E-08 60.1 7.9 101 149-254 6-117 (362)
263 3g79_A NDP-N-acetyl-D-galactos 97.0 0.002 6.9E-08 61.4 9.2 98 145-245 350-458 (478)
264 1h6d_A Precursor form of gluco 97.0 0.00065 2.2E-08 63.9 5.7 103 148-255 83-203 (433)
265 1lc0_A Biliverdin reductase A; 97.0 0.0028 9.6E-08 56.3 9.6 101 149-255 8-118 (294)
266 4a8t_A Putrescine carbamoyltra 97.0 0.011 3.8E-07 53.7 13.4 133 89-242 136-302 (339)
267 2aef_A Calcium-gated potassium 97.0 0.0005 1.7E-08 58.8 4.1 84 148-234 9-105 (234)
268 3d0o_A L-LDH 1, L-lactate dehy 97.0 0.00072 2.5E-08 61.0 5.2 116 147-262 5-154 (317)
269 1u8x_X Maltose-6'-phosphate gl 97.0 0.00037 1.3E-08 66.4 3.4 111 148-258 28-194 (472)
270 1ff9_A Saccharopine reductase; 97.0 0.00049 1.7E-08 65.2 4.3 64 147-210 2-79 (450)
271 4a8p_A Putrescine carbamoyltra 97.0 0.0097 3.3E-07 54.4 12.6 133 89-242 114-280 (355)
272 3q2o_A Phosphoribosylaminoimid 97.0 0.0011 3.8E-08 61.1 6.5 61 145-205 11-81 (389)
273 1pvv_A Otcase, ornithine carba 96.9 0.0064 2.2E-07 54.8 11.1 154 62-242 95-281 (315)
274 3pqe_A L-LDH, L-lactate dehydr 96.9 0.00066 2.3E-08 61.6 4.6 91 147-237 4-124 (326)
275 4ep1_A Otcase, ornithine carba 96.9 0.0057 2E-07 55.6 10.7 131 89-242 143-304 (340)
276 1pg5_A Aspartate carbamoyltran 96.9 0.0053 1.8E-07 54.9 10.2 90 146-235 147-260 (299)
277 3dqp_A Oxidoreductase YLBE; al 96.9 0.003 1E-07 52.9 8.3 62 149-210 1-74 (219)
278 3gdo_A Uncharacterized oxidore 96.9 0.0014 4.7E-08 59.9 6.4 101 149-254 6-117 (358)
279 1vlv_A Otcase, ornithine carba 96.9 0.0059 2E-07 55.2 10.3 153 63-242 108-295 (325)
280 3i23_A Oxidoreductase, GFO/IDH 96.9 0.0025 8.4E-08 58.0 7.9 102 149-255 3-118 (349)
281 3vku_A L-LDH, L-lactate dehydr 96.8 0.0013 4.5E-08 59.7 5.9 92 146-237 7-127 (326)
282 1ez4_A Lactate dehydrogenase; 96.8 0.00082 2.8E-08 60.7 4.5 115 148-262 5-152 (318)
283 3r7f_A Aspartate carbamoyltran 96.8 0.0049 1.7E-07 55.3 9.3 124 89-235 110-250 (304)
284 4ew6_A D-galactose-1-dehydroge 96.8 0.0016 5.3E-08 59.0 6.3 62 147-209 24-91 (330)
285 1oth_A Protein (ornithine tran 96.8 0.021 7.1E-07 51.5 13.5 161 48-235 72-271 (321)
286 3dhn_A NAD-dependent epimerase 96.8 0.0032 1.1E-07 52.8 7.8 62 149-210 5-78 (227)
287 2nvw_A Galactose/lactose metab 96.8 0.0014 4.7E-08 62.6 5.9 102 147-253 38-165 (479)
288 3do5_A HOM, homoserine dehydro 96.8 0.0032 1.1E-07 57.1 8.1 106 149-255 3-136 (327)
289 3gd5_A Otcase, ornithine carba 96.8 0.008 2.7E-07 54.3 10.6 131 89-242 121-283 (323)
290 2nqt_A N-acetyl-gamma-glutamyl 96.8 0.0046 1.6E-07 56.6 9.0 91 149-246 10-121 (352)
291 4a7p_A UDP-glucose dehydrogena 96.8 0.0036 1.2E-07 59.1 8.4 98 143-245 317-430 (446)
292 3ldh_A Lactate dehydrogenase; 96.7 0.00055 1.9E-08 62.2 2.6 90 147-237 20-140 (330)
293 1duv_G Octase-1, ornithine tra 96.7 0.0066 2.3E-07 55.1 9.7 150 62-236 93-275 (333)
294 1xyg_A Putative N-acetyl-gamma 96.7 0.0067 2.3E-07 55.6 9.8 84 148-238 16-115 (359)
295 2ixa_A Alpha-N-acetylgalactosa 96.7 0.0016 5.4E-08 61.3 5.7 63 148-210 20-102 (444)
296 3o9z_A Lipopolysaccaride biosy 96.7 0.0025 8.6E-08 57.2 6.6 62 149-210 4-83 (312)
297 4fb5_A Probable oxidoreductase 96.7 0.0018 6E-08 59.2 5.6 64 148-211 25-106 (393)
298 1ml4_A Aspartate transcarbamoy 96.7 0.0043 1.5E-07 55.7 8.0 147 62-235 94-268 (308)
299 3moi_A Probable dehydrogenase; 96.7 0.0016 5.4E-08 60.1 5.3 62 149-210 3-75 (387)
300 2rir_A Dipicolinate synthase, 96.7 0.0078 2.7E-07 53.5 9.7 108 146-258 5-124 (300)
301 3gpi_A NAD-dependent epimerase 96.7 0.002 6.9E-08 56.2 5.7 62 147-208 2-72 (286)
302 2ozp_A N-acetyl-gamma-glutamyl 96.7 0.0066 2.3E-07 55.4 9.3 83 149-237 5-101 (345)
303 4f3y_A DHPR, dihydrodipicolina 96.7 0.0032 1.1E-07 55.6 6.9 61 148-208 7-82 (272)
304 2dt5_A AT-rich DNA-binding pro 96.7 0.0019 6.4E-08 55.0 5.3 62 148-210 80-151 (211)
305 3oa2_A WBPB; oxidoreductase, s 96.7 0.0027 9.3E-08 57.1 6.6 62 149-210 4-84 (318)
306 2yv1_A Succinyl-COA ligase [AD 96.7 0.003 1E-07 56.4 6.8 103 149-255 14-123 (294)
307 1zud_1 Adenylyltransferase THI 96.7 0.00098 3.4E-08 58.1 3.5 79 144-223 24-141 (251)
308 2zqz_A L-LDH, L-lactate dehydr 96.7 0.0012 4.1E-08 59.9 4.2 116 147-262 8-156 (326)
309 1hdo_A Biliverdin IX beta redu 96.7 0.0029 9.9E-08 52.0 6.2 63 148-210 3-78 (206)
310 3tpf_A Otcase, ornithine carba 96.6 0.013 4.5E-07 52.6 10.7 132 89-243 109-273 (307)
311 4fcc_A Glutamate dehydrogenase 96.6 0.01 3.5E-07 55.9 10.2 106 143-255 230-368 (450)
312 3orq_A N5-carboxyaminoimidazol 96.6 0.0034 1.2E-07 57.7 7.0 61 145-205 9-79 (377)
313 2we8_A Xanthine dehydrogenase; 96.6 0.0085 2.9E-07 55.5 9.6 97 147-258 203-302 (386)
314 3tl2_A Malate dehydrogenase; c 96.6 0.0019 6.5E-08 58.3 5.0 91 147-237 7-129 (315)
315 3e8x_A Putative NAD-dependent 96.6 0.002 6.8E-08 54.7 4.9 68 143-210 16-95 (236)
316 3ew7_A LMO0794 protein; Q8Y8U8 96.6 0.0029 9.9E-08 52.7 5.8 89 149-237 1-104 (221)
317 2yv2_A Succinyl-COA synthetase 96.6 0.0048 1.6E-07 55.2 7.3 104 148-255 13-124 (297)
318 3aog_A Glutamate dehydrogenase 96.6 0.015 5.3E-07 54.6 11.0 105 143-255 230-358 (440)
319 3sds_A Ornithine carbamoyltran 96.5 0.016 5.4E-07 53.0 10.7 136 89-235 139-308 (353)
320 3btv_A Galactose/lactose metab 96.5 0.0013 4.4E-08 61.9 3.5 63 148-210 20-100 (438)
321 3csu_A Protein (aspartate carb 96.5 0.01 3.5E-07 53.3 9.0 153 62-241 92-274 (310)
322 1lu9_A Methylene tetrahydromet 96.4 0.0033 1.1E-07 55.6 5.4 38 145-182 116-154 (287)
323 3h2s_A Putative NADH-flavin re 96.4 0.0041 1.4E-07 52.0 5.8 89 149-237 1-106 (224)
324 2xxj_A L-LDH, L-lactate dehydr 96.4 0.0019 6.6E-08 58.0 3.9 109 149-257 1-140 (310)
325 1s6y_A 6-phospho-beta-glucosid 96.4 0.0044 1.5E-07 58.6 6.5 111 148-258 7-175 (450)
326 3ijp_A DHPR, dihydrodipicolina 96.4 0.0093 3.2E-07 53.0 8.2 84 149-237 22-121 (288)
327 2tmg_A Protein (glutamate dehy 96.4 0.047 1.6E-06 51.0 13.2 105 143-255 204-333 (415)
328 1yqd_A Sinapyl alcohol dehydro 96.4 0.0016 5.5E-08 59.6 3.2 85 147-236 187-283 (366)
329 3grf_A Ornithine carbamoyltran 96.4 0.013 4.3E-07 53.2 9.0 138 89-242 118-293 (328)
330 4had_A Probable oxidoreductase 96.4 0.0019 6.5E-08 58.5 3.5 62 149-210 24-97 (350)
331 2pzm_A Putative nucleotide sug 96.4 0.0063 2.2E-07 54.3 6.9 66 144-209 16-98 (330)
332 1ys4_A Aspartate-semialdehyde 96.4 0.0053 1.8E-07 56.2 6.5 83 149-236 9-115 (354)
333 4amu_A Ornithine carbamoyltran 96.3 0.012 4.1E-07 54.0 8.7 124 89-235 144-300 (365)
334 2d4a_B Malate dehydrogenase; a 96.3 0.0022 7.5E-08 57.6 3.7 90 150-243 1-122 (308)
335 2bka_A CC3, TAT-interacting pr 96.3 0.0067 2.3E-07 51.3 6.5 65 146-210 16-95 (242)
336 3nv9_A Malic enzyme; rossmann 96.3 0.018 6E-07 54.3 9.7 121 93-239 187-331 (487)
337 3i6i_A Putative leucoanthocyan 96.3 0.0077 2.6E-07 54.1 7.3 35 147-181 9-44 (346)
338 4id9_A Short-chain dehydrogena 96.3 0.0047 1.6E-07 55.3 5.8 67 143-209 14-87 (347)
339 3v5n_A Oxidoreductase; structu 96.3 0.0061 2.1E-07 56.9 6.6 102 148-254 37-162 (417)
340 3ojo_A CAP5O; rossmann fold, c 96.3 0.017 5.8E-07 54.3 9.7 87 146-239 313-410 (431)
341 4ina_A Saccharopine dehydrogen 96.3 0.0016 5.6E-08 60.6 2.7 61 149-209 2-86 (405)
342 1js1_X Transcarbamylase; alpha 96.3 0.082 2.8E-06 47.7 13.7 139 82-243 123-286 (324)
343 1qyc_A Phenylcoumaran benzylic 96.2 0.011 3.8E-07 51.8 7.7 61 148-208 4-86 (308)
344 2w37_A Ornithine carbamoyltran 96.2 0.013 4.6E-07 53.5 8.3 148 62-236 116-296 (359)
345 1xgk_A Nitrogen metabolite rep 96.2 0.0031 1.1E-07 57.3 4.1 92 147-238 4-115 (352)
346 2ejw_A HDH, homoserine dehydro 96.2 0.0053 1.8E-07 55.7 5.6 99 149-252 4-116 (332)
347 3two_A Mannitol dehydrogenase; 96.2 0.005 1.7E-07 55.7 5.3 86 147-237 176-267 (348)
348 4g65_A TRK system potassium up 96.2 0.002 6.9E-08 61.1 2.7 63 147-209 2-78 (461)
349 1kyq_A Met8P, siroheme biosynt 96.2 0.0016 5.6E-08 57.5 2.0 41 141-181 6-46 (274)
350 2gas_A Isoflavone reductase; N 96.2 0.0099 3.4E-07 52.1 7.0 34 148-181 2-36 (307)
351 3k92_A NAD-GDH, NAD-specific g 96.2 0.023 7.9E-07 53.1 9.7 105 143-255 216-343 (424)
352 1y1p_A ARII, aldehyde reductas 96.2 0.0085 2.9E-07 53.2 6.6 64 145-208 8-92 (342)
353 4gmf_A Yersiniabactin biosynth 96.1 0.0023 8E-08 59.0 2.9 62 148-210 7-77 (372)
354 4gqa_A NAD binding oxidoreduct 96.1 0.0019 6.6E-08 59.9 2.4 63 149-211 27-108 (412)
355 3keo_A Redox-sensing transcrip 96.1 0.0066 2.2E-07 51.6 5.4 63 148-210 84-159 (212)
356 1b7g_O Protein (glyceraldehyde 96.1 0.011 3.9E-07 53.7 7.3 62 149-210 2-88 (340)
357 2czc_A Glyceraldehyde-3-phosph 96.1 0.0052 1.8E-07 55.7 5.0 63 149-211 3-91 (334)
358 2yfq_A Padgh, NAD-GDH, NAD-spe 96.1 0.022 7.4E-07 53.3 9.2 105 143-255 207-340 (421)
359 1mld_A Malate dehydrogenase; o 96.1 0.02 6.9E-07 51.4 8.8 94 149-244 1-124 (314)
360 3lk7_A UDP-N-acetylmuramoylala 96.1 0.0042 1.4E-07 58.6 4.4 110 145-254 6-139 (451)
361 3k31_A Enoyl-(acyl-carrier-pro 96.1 0.0072 2.5E-07 53.5 5.6 40 143-182 25-67 (296)
362 1zh8_A Oxidoreductase; TM0312, 96.1 0.0032 1.1E-07 57.0 3.4 63 148-210 18-93 (340)
363 4aj2_A L-lactate dehydrogenase 96.0 0.0065 2.2E-07 55.1 5.3 92 145-237 16-138 (331)
364 3dty_A Oxidoreductase, GFO/IDH 96.0 0.0023 7.8E-08 59.3 2.3 64 148-211 12-97 (398)
365 1dih_A Dihydrodipicolinate red 96.0 0.0093 3.2E-07 52.6 6.1 60 148-207 5-80 (273)
366 3dr3_A N-acetyl-gamma-glutamyl 96.0 0.0069 2.4E-07 55.1 5.3 87 149-240 5-111 (337)
367 3c8m_A Homoserine dehydrogenas 96.0 0.0084 2.9E-07 54.3 5.8 105 149-254 7-141 (331)
368 3rui_A Ubiquitin-like modifier 96.0 0.0095 3.2E-07 54.2 6.1 38 144-181 30-68 (340)
369 3aoe_E Glutamate dehydrogenase 96.0 0.044 1.5E-06 51.2 10.8 105 143-255 213-337 (419)
370 3u3x_A Oxidoreductase; structu 96.0 0.004 1.4E-07 57.0 3.6 63 148-210 26-99 (361)
371 4h31_A Otcase, ornithine carba 96.0 0.12 4E-06 47.4 13.3 127 88-235 142-300 (358)
372 2csu_A 457AA long hypothetical 96.0 0.018 6.2E-07 54.5 8.2 108 146-257 6-125 (457)
373 3m2p_A UDP-N-acetylglucosamine 95.9 0.012 4.1E-07 51.9 6.4 61 148-209 2-72 (311)
374 3oig_A Enoyl-[acyl-carrier-pro 95.9 0.013 4.6E-07 50.5 6.6 37 145-181 4-43 (266)
375 3fi9_A Malate dehydrogenase; s 95.9 0.0052 1.8E-07 56.1 4.0 63 146-208 6-85 (343)
376 2r6j_A Eugenol synthase 1; phe 95.9 0.015 5.1E-07 51.4 7.0 60 149-208 12-88 (318)
377 3c1o_A Eugenol synthase; pheny 95.9 0.015 5E-07 51.5 6.9 61 148-208 4-86 (321)
378 1vkn_A N-acetyl-gamma-glutamyl 95.9 0.048 1.6E-06 49.8 10.4 88 148-242 13-114 (351)
379 3rft_A Uronate dehydrogenase; 95.9 0.0083 2.8E-07 52.0 5.1 62 147-208 2-73 (267)
380 2q3e_A UDP-glucose 6-dehydroge 95.9 0.018 6E-07 54.6 7.7 91 146-238 327-445 (467)
381 3e48_A Putative nucleoside-dip 95.9 0.014 4.9E-07 50.7 6.6 61 149-209 1-75 (289)
382 3gg2_A Sugar dehydrogenase, UD 95.8 0.015 5E-07 55.0 6.9 93 143-238 313-421 (450)
383 3on5_A BH1974 protein; structu 95.8 0.012 4.2E-07 54.0 6.1 92 148-258 199-292 (362)
384 3ijr_A Oxidoreductase, short c 95.8 0.015 5.3E-07 51.2 6.7 40 143-182 42-82 (291)
385 3d6n_B Aspartate carbamoyltran 95.8 0.03 1E-06 49.8 8.5 86 146-235 144-251 (291)
386 1cf2_P Protein (glyceraldehyde 95.8 0.0025 8.7E-08 58.0 1.5 62 149-210 2-89 (337)
387 3eag_A UDP-N-acetylmuramate:L- 95.8 0.011 3.8E-07 53.2 5.7 108 147-254 3-135 (326)
388 2cdc_A Glucose dehydrogenase g 95.8 0.0037 1.3E-07 57.0 2.5 88 145-236 178-279 (366)
389 3h8v_A Ubiquitin-like modifier 95.8 0.0072 2.5E-07 53.9 4.3 38 144-181 32-70 (292)
390 1smk_A Malate dehydrogenase, g 95.8 0.014 4.8E-07 52.7 6.3 62 148-209 8-86 (326)
391 4h3v_A Oxidoreductase domain p 95.7 0.0026 8.9E-08 58.0 1.3 63 149-211 7-87 (390)
392 1cdo_A Alcohol dehydrogenase; 95.7 0.021 7.2E-07 52.1 7.4 85 147-236 192-295 (374)
393 1piw_A Hypothetical zinc-type 95.7 0.0057 1.9E-07 55.7 3.6 87 147-236 179-277 (360)
394 1pjq_A CYSG, siroheme synthase 95.7 0.0051 1.8E-07 58.2 3.3 71 141-212 5-84 (457)
395 2jhf_A Alcohol dehydrogenase E 95.7 0.021 7.2E-07 52.1 7.2 85 147-236 191-294 (374)
396 4e4t_A Phosphoribosylaminoimid 95.7 0.01 3.4E-07 55.5 5.2 61 145-205 32-102 (419)
397 3oqb_A Oxidoreductase; structu 95.7 0.016 5.6E-07 53.0 6.5 62 149-210 7-94 (383)
398 1uuf_A YAHK, zinc-type alcohol 95.7 0.005 1.7E-07 56.4 3.0 85 147-236 194-289 (369)
399 3uce_A Dehydrogenase; rossmann 95.7 0.012 4.2E-07 49.4 5.2 91 145-237 3-118 (223)
400 2zcu_A Uncharacterized oxidore 95.7 0.0052 1.8E-07 53.3 2.9 59 150-208 1-74 (286)
401 2hcy_A Alcohol dehydrogenase 1 95.7 0.0099 3.4E-07 53.7 4.8 85 147-236 169-270 (347)
402 4ekn_B Aspartate carbamoyltran 95.6 0.044 1.5E-06 49.1 8.9 90 146-237 149-266 (306)
403 1zq6_A Otcase, ornithine carba 95.6 0.23 7.9E-06 45.3 13.8 130 89-242 153-325 (359)
404 1dhr_A Dihydropteridine reduct 95.6 0.017 5.7E-07 49.2 5.9 39 146-184 5-44 (241)
405 1rjw_A ADH-HT, alcohol dehydro 95.6 0.0049 1.7E-07 55.7 2.6 85 147-236 164-262 (339)
406 1p0f_A NADP-dependent alcohol 95.6 0.024 8.1E-07 51.7 7.2 85 147-236 191-294 (373)
407 1qyd_A Pinoresinol-lariciresin 95.6 0.04 1.4E-06 48.3 8.5 61 148-208 4-85 (313)
408 2q1s_A Putative nucleotide sug 95.6 0.022 7.4E-07 51.8 7.0 66 145-210 29-110 (377)
409 4gx0_A TRKA domain protein; me 95.6 0.02 6.9E-07 55.3 7.1 78 149-228 349-435 (565)
410 3cps_A Glyceraldehyde 3-phosph 95.6 0.016 5.4E-07 53.1 5.9 83 149-236 18-139 (354)
411 1e3i_A Alcohol dehydrogenase, 95.6 0.03 1E-06 51.1 7.9 85 147-236 195-298 (376)
412 1v9l_A Glutamate dehydrogenase 95.6 0.058 2E-06 50.4 9.7 106 143-256 205-340 (421)
413 2fzw_A Alcohol dehydrogenase c 95.6 0.021 7.3E-07 52.0 6.7 85 147-236 190-293 (373)
414 2z1m_A GDP-D-mannose dehydrata 95.6 0.015 5.3E-07 51.5 5.6 63 147-209 2-85 (345)
415 2wm3_A NMRA-like family domain 95.6 0.015 5E-07 51.0 5.4 61 148-208 5-81 (299)
416 3orf_A Dihydropteridine reduct 95.5 0.014 4.8E-07 50.2 5.1 93 146-238 20-147 (251)
417 2d8a_A PH0655, probable L-thre 95.5 0.0065 2.2E-07 55.0 3.0 85 147-236 167-268 (348)
418 3ip3_A Oxidoreductase, putativ 95.5 0.012 4E-07 53.1 4.7 61 149-210 3-78 (337)
419 2o3j_A UDP-glucose 6-dehydroge 95.5 0.051 1.8E-06 51.6 9.4 98 145-245 332-455 (481)
420 1e3j_A NADP(H)-dependent ketos 95.5 0.016 5.4E-07 52.5 5.5 86 147-237 168-273 (352)
421 3slg_A PBGP3 protein; structur 95.5 0.013 4.6E-07 52.9 5.0 64 145-208 21-100 (372)
422 3e5r_O PP38, glyceraldehyde-3- 95.5 0.023 7.8E-07 51.7 6.5 29 149-177 4-33 (337)
423 3nrc_A Enoyl-[acyl-carrier-pro 95.5 0.033 1.1E-06 48.6 7.4 39 143-181 21-62 (280)
424 3oh8_A Nucleoside-diphosphate 95.5 0.018 6.3E-07 54.9 6.2 62 148-209 147-211 (516)
425 1ooe_A Dihydropteridine reduct 95.5 0.015 5.2E-07 49.3 5.0 38 147-184 2-40 (236)
426 3ruf_A WBGU; rossmann fold, UD 95.4 0.021 7.3E-07 51.0 6.2 63 146-208 23-109 (351)
427 2r00_A Aspartate-semialdehyde 95.4 0.011 3.8E-07 53.7 4.2 83 149-236 4-97 (336)
428 1hdg_O Holo-D-glyceraldehyde-3 95.4 0.0097 3.3E-07 54.0 3.8 29 149-177 1-32 (332)
429 1b8p_A Protein (malate dehydro 95.4 0.035 1.2E-06 50.1 7.5 61 148-208 5-92 (329)
430 1o6z_A MDH, malate dehydrogena 95.4 0.02 6.7E-07 51.2 5.6 109 149-257 1-143 (303)
431 3ius_A Uncharacterized conserv 95.3 0.01 3.5E-07 51.5 3.7 61 148-210 5-74 (286)
432 3cmc_O GAPDH, glyceraldehyde-3 95.3 0.014 4.6E-07 53.1 4.5 29 149-177 2-31 (334)
433 4gsl_A Ubiquitin-like modifier 95.3 0.02 6.8E-07 55.9 5.8 38 144-181 322-360 (615)
434 2a35_A Hypothetical protein PA 95.3 0.014 4.6E-07 48.3 4.1 62 147-210 4-76 (215)
435 2q1w_A Putative nucleotide sug 95.3 0.023 8E-07 50.6 6.0 66 144-209 17-99 (333)
436 3uko_A Alcohol dehydrogenase c 95.3 0.025 8.6E-07 51.7 6.3 85 147-236 193-296 (378)
437 1lnq_A MTHK channels, potassiu 95.3 0.01 3.4E-07 53.5 3.5 79 148-229 115-205 (336)
438 3ip1_A Alcohol dehydrogenase, 95.3 0.018 6.1E-07 53.3 5.3 87 146-236 212-319 (404)
439 3ay3_A NAD-dependent epimerase 95.3 0.018 6.2E-07 49.5 5.0 61 149-209 3-73 (267)
440 2c5a_A GDP-mannose-3', 5'-epim 95.3 0.028 9.6E-07 51.1 6.5 63 146-208 27-102 (379)
441 2dkn_A 3-alpha-hydroxysteroid 95.3 0.023 8E-07 48.1 5.6 60 149-208 2-71 (255)
442 1pqw_A Polyketide synthase; ro 95.3 0.0035 1.2E-07 51.8 0.3 85 147-237 38-139 (198)
443 1iz0_A Quinone oxidoreductase; 95.2 0.012 4E-07 52.1 3.7 83 147-236 125-219 (302)
444 1p9l_A Dihydrodipicolinate red 95.2 0.073 2.5E-06 46.1 8.7 50 149-208 1-54 (245)
445 3r3j_A Glutamate dehydrogenase 95.2 0.032 1.1E-06 52.5 6.8 105 143-255 234-373 (456)
446 1xq6_A Unknown protein; struct 95.2 0.015 5.2E-07 49.1 4.3 64 146-209 2-79 (253)
447 3t7c_A Carveol dehydrogenase; 95.2 0.058 2E-06 47.5 8.3 42 141-182 21-63 (299)
448 2ydy_A Methionine adenosyltran 95.2 0.023 7.9E-07 50.0 5.6 61 148-208 2-69 (315)
449 2y0c_A BCEC, UDP-glucose dehyd 95.2 0.057 2E-06 51.3 8.6 106 145-258 325-456 (478)
450 3vh1_A Ubiquitin-like modifier 95.2 0.029 9.7E-07 54.7 6.5 37 144-180 323-360 (598)
451 2x4g_A Nucleoside-diphosphate- 95.2 0.027 9.2E-07 50.0 5.9 61 148-208 13-86 (342)
452 2x0j_A Malate dehydrogenase; o 95.1 0.0076 2.6E-07 53.8 2.1 96 149-246 1-127 (294)
453 1u8f_O GAPDH, glyceraldehyde-3 95.1 0.021 7.3E-07 51.8 5.1 84 149-237 4-124 (335)
454 2cf5_A Atccad5, CAD, cinnamyl 95.1 0.0082 2.8E-07 54.6 2.3 85 147-236 180-276 (357)
455 3k5i_A Phosphoribosyl-aminoimi 95.1 0.028 9.5E-07 52.1 5.9 65 140-205 16-92 (403)
456 2ep5_A 350AA long hypothetical 95.1 0.034 1.2E-06 50.6 6.4 82 149-236 5-109 (350)
457 3mtj_A Homoserine dehydrogenas 95.1 0.012 4E-07 55.6 3.3 104 148-255 10-131 (444)
458 2dq4_A L-threonine 3-dehydroge 95.0 0.012 4E-07 53.2 3.1 85 147-236 164-263 (343)
459 1e6u_A GDP-fucose synthetase; 95.0 0.043 1.5E-06 48.3 6.7 62 147-210 2-66 (321)
460 2pk3_A GDP-6-deoxy-D-LYXO-4-he 95.0 0.031 1.1E-06 49.2 5.8 63 147-209 11-84 (321)
461 3r3s_A Oxidoreductase; structu 95.0 0.083 2.8E-06 46.5 8.6 37 144-180 45-82 (294)
462 1nvm_B Acetaldehyde dehydrogen 95.0 0.026 9E-07 50.6 5.3 60 149-208 5-80 (312)
463 3d4o_A Dipicolinate synthase s 95.0 0.11 3.9E-06 45.7 9.4 108 146-258 3-122 (293)
464 2a4k_A 3-oxoacyl-[acyl carrier 95.0 0.02 6.8E-07 49.7 4.3 38 145-182 3-41 (263)
465 3s2e_A Zinc-containing alcohol 94.9 0.0083 2.8E-07 54.0 1.9 84 147-235 166-263 (340)
466 1sb8_A WBPP; epimerase, 4-epim 94.9 0.034 1.2E-06 49.8 6.0 65 145-209 24-112 (352)
467 2yfk_A Aspartate/ornithine car 94.9 0.048 1.7E-06 50.8 7.0 90 146-235 186-331 (418)
468 3upl_A Oxidoreductase; rossman 94.9 0.02 6.9E-07 53.9 4.5 105 149-257 24-162 (446)
469 2p4h_X Vestitone reductase; NA 94.9 0.058 2E-06 47.3 7.3 60 148-207 1-82 (322)
470 3h5n_A MCCB protein; ubiquitin 94.9 0.025 8.6E-07 51.7 5.0 38 144-181 114-152 (353)
471 4b79_A PA4098, probable short- 94.9 0.039 1.3E-06 47.8 5.9 91 146-236 9-134 (242)
472 1rm4_O Glyceraldehyde 3-phosph 94.9 0.039 1.3E-06 50.1 6.2 28 149-176 2-32 (337)
473 1pl8_A Human sorbitol dehydrog 94.9 0.025 8.7E-07 51.2 5.0 85 147-236 171-274 (356)
474 1n2s_A DTDP-4-, DTDP-glucose o 94.9 0.049 1.7E-06 47.3 6.7 60 149-209 1-64 (299)
475 4b4o_A Epimerase family protei 94.9 0.027 9.2E-07 49.3 4.9 58 149-207 1-59 (298)
476 2jl1_A Triphenylmethane reduct 94.8 0.018 6E-07 49.9 3.6 60 149-208 1-75 (287)
477 3sxp_A ADP-L-glycero-D-mannohe 94.8 0.054 1.8E-06 48.7 7.0 39 144-182 6-47 (362)
478 3uog_A Alcohol dehydrogenase; 94.8 0.016 5.5E-07 52.7 3.4 84 147-236 189-288 (363)
479 2rh8_A Anthocyanidin reductase 94.8 0.069 2.3E-06 47.4 7.5 60 148-207 9-88 (338)
480 3ftp_A 3-oxoacyl-[acyl-carrier 94.8 0.0089 3.1E-07 52.2 1.6 42 141-182 21-63 (270)
481 3mw9_A GDH 1, glutamate dehydr 94.8 0.087 3E-06 50.1 8.4 101 145-255 241-366 (501)
482 2yyy_A Glyceraldehyde-3-phosph 94.8 0.052 1.8E-06 49.4 6.7 81 149-234 3-112 (343)
483 4ej6_A Putative zinc-binding d 94.8 0.017 5.8E-07 52.8 3.5 85 147-236 182-285 (370)
484 3tz6_A Aspartate-semialdehyde 94.7 0.025 8.5E-07 51.6 4.4 84 148-236 1-95 (344)
485 1ebf_A Homoserine dehydrogenas 94.7 0.032 1.1E-06 51.1 5.1 62 149-210 5-95 (358)
486 1db3_A GDP-mannose 4,6-dehydra 94.7 0.059 2E-06 48.4 6.9 35 148-182 1-36 (372)
487 4eye_A Probable oxidoreductase 94.7 0.017 5.8E-07 52.1 3.3 83 147-235 159-257 (342)
488 3sc6_A DTDP-4-dehydrorhamnose 94.7 0.041 1.4E-06 47.6 5.6 58 149-209 6-66 (287)
489 4fs3_A Enoyl-[acyl-carrier-pro 94.7 0.049 1.7E-06 47.1 6.0 38 145-182 3-43 (256)
490 1rkx_A CDP-glucose-4,6-dehydra 94.7 0.038 1.3E-06 49.6 5.5 63 146-208 7-89 (357)
491 1fjh_A 3alpha-hydroxysteroid d 94.6 0.036 1.2E-06 47.3 5.0 92 149-240 2-118 (257)
492 1vl0_A DTDP-4-dehydrorhamnose 94.6 0.058 2E-06 46.8 6.4 60 147-209 11-73 (292)
493 2bma_A Glutamate dehydrogenase 94.6 0.063 2.1E-06 50.8 6.9 106 143-255 247-386 (470)
494 2h6e_A ADH-4, D-arabinose 1-de 94.6 0.016 5.5E-07 52.2 2.8 84 147-235 170-269 (344)
495 3hhp_A Malate dehydrogenase; M 94.5 0.089 3E-06 47.2 7.6 95 149-246 1-127 (312)
496 3b1j_A Glyceraldehyde 3-phosph 94.5 0.022 7.5E-07 51.8 3.5 29 149-177 3-34 (339)
497 1t4b_A Aspartate-semialdehyde 94.5 0.072 2.5E-06 48.9 7.0 82 149-236 2-99 (367)
498 3enk_A UDP-glucose 4-epimerase 94.5 0.071 2.4E-06 47.3 6.8 63 147-209 4-88 (341)
499 2x5o_A UDP-N-acetylmuramoylala 94.5 0.13 4.6E-06 48.0 9.0 109 146-254 3-131 (439)
500 2v6g_A Progesterone 5-beta-red 94.5 0.056 1.9E-06 48.3 6.1 61 148-208 1-81 (364)
No 1
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=5.2e-61 Score=443.54 Aligned_cols=272 Identities=25% Similarity=0.405 Sum_probs=240.7
Q ss_pred CCCCCchhhhCCCcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccC-CCccEEEEcCCCCCcCChhHHhh
Q 043239 13 APGCFNPPLSERFTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLL-PALEIVVGSTAGIDHVDLQECRR 91 (286)
Q Consensus 13 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~d~id~~~~~~ 91 (286)
+++...+.|++.|++.......+. ..+.+.+.++++|++++++.+++++++++++ |+||||++.|+|+||||+++|++
T Consensus 37 ~~~~~~~~l~~~~~v~~~~~~~~~-~~~~l~~~~~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~~~G~D~id~~~a~~ 115 (345)
T 4g2n_A 37 FTPAIEAELRQRFDLEVNLEDTVL-TPSGIASRAHGAEVLFVTATEAITAEVIRKLQPGLKTIATLSVGYDHIDMAAARS 115 (345)
T ss_dssp CCHHHHHHHHHHSEEEECTTCCCC-CHHHHHHHTTTCSEEEECTTSCBCHHHHHHTTTTCCEEEESSSCCTTBCHHHHHH
T ss_pred CCHHHHHHHHccCCEEEecCCCCC-CHHHHHHHhcCCeEEEEeCCCCCCHHHHHhhcCCceEEEEcCCcccccCHHHHHh
Confidence 455567778888887654322222 2444556678999999987788999999997 79999999999999999999999
Q ss_pred cCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCC-CCCCcccCCCCEEEEEcCChHHHHHHHHhccC
Q 043239 92 RGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHG-AYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPF 170 (286)
Q Consensus 92 ~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~-~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~ 170 (286)
+||.|+|+|++++.+||||++++||++.|+++.+.+.+++|.|.... ....+.+++|++|||||+|.||+.+|+++++|
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~ 195 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF 195 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999997532 12358899999999999999999999999999
Q ss_pred CCEEEEECCCCCCC---CCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 043239 171 GCSIAYTSRKKKPG---VSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVH 247 (286)
Q Consensus 171 g~~V~~~~r~~~~~---~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~ 247 (286)
|++|++|||+..+. .+.....++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|++
T Consensus 196 G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~ 275 (345)
T 4g2n_A 196 GLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIE 275 (345)
T ss_dssp TCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHH
T ss_pred CCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHH
Confidence 99999999986432 233444699999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeeEEEeeccCCCCCCcCCcccccc--cccccccCC
Q 043239 248 FLVRGSLVELVLMCLRTSLMCQRSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 248 al~~~~i~ga~lDv~~~e~~~~~~~l~~~~--~~tph~~~~ 286 (286)
+|++|+|.||+||||+.|| +.+++|+..+ ++|||||++
T Consensus 276 aL~~g~i~gA~LDVf~~EP-~~~~pL~~~~nvilTPHia~~ 315 (345)
T 4g2n_A 276 ALRSKHLFAAGLDVFANEP-AIDPRYRSLDNIFLTPHIGSA 315 (345)
T ss_dssp HHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECCSCTTC
T ss_pred HHHhCCceEEEecCCCCCC-CCCchHHhCCCEEEcCccCcC
Confidence 9999999999999999999 7888888776 999999986
No 2
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=6e-61 Score=442.28 Aligned_cols=270 Identities=32% Similarity=0.492 Sum_probs=215.5
Q ss_pred CCCCCchhhhCCCcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhc
Q 043239 13 APGCFNPPLSERFTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRR 92 (286)
Q Consensus 13 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~ 92 (286)
+++...+.|++.|++..+. . ..+.++++.+. +++|++++++.+++++++++++|+||+|++.|+|+||||+++|+++
T Consensus 39 ~~~~~~~~L~~~~~v~~~~-~-~~~~~~~~~~~-~~~d~li~~~~~~i~~~~l~~~p~Lk~I~~~g~G~d~id~~~a~~~ 115 (340)
T 4dgs_A 39 MMPFVMDELQRNYSVHRLY-Q-AADRPALEAAL-PSIRAVATGGGAGLSNEWMEKLPSLGIIAINGVGTDKVDLARARRR 115 (340)
T ss_dssp CCHHHHHTHHHHSCCEETT-C-GGGHHHHHHHG-GGCCEEEEETTTCBCHHHHHHCSSCCEEEEESSCCTTBCHHHHHHT
T ss_pred CCHHHHHHHhcCCcEEEeC-C-CCCHHHHHHHh-CCcEEEEEcCCCCCCHHHHhhCCCCEEEEECCCCccccCHHHHHhC
Confidence 4555667788888877553 1 22334555554 8999999988889999999999999999999999999999999999
Q ss_pred CeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCC
Q 043239 93 GILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGC 172 (286)
Q Consensus 93 gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~ 172 (286)
||.|+|+|++++.+|||+++++||++.|+++.+.+.+++|.|.+...++.+.+++|++|||||+|.||+.+|++++++|+
T Consensus 116 gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~~G~ 195 (340)
T 4dgs_A 116 NIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEAFGM 195 (340)
T ss_dssp TCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHTTTC
T ss_pred CEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999985322346789999999999999999999999999999
Q ss_pred EEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 173 SIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 173 ~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
+|++|+|+.....+.....++++++++||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|+++|++|
T Consensus 196 ~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g 275 (340)
T 4dgs_A 196 SVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSG 275 (340)
T ss_dssp EEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------C
T ss_pred EEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcC
Confidence 99999998876555555679999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEeeccCCCCCCcCCcccccc--cccccccCC
Q 043239 253 SLVELVLMCLRTSLMCQRSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 253 ~i~ga~lDv~~~e~~~~~~~l~~~~--~~tph~~~~ 286 (286)
+|.||+||||+.||++.+ +|+..+ ++|||+|++
T Consensus 276 ~i~gA~LDVf~~EP~~~~-~L~~~~nvilTPHia~~ 310 (340)
T 4dgs_A 276 TIAGAGLDVFVNEPAIRS-EFHTTPNTVLMPHQGSA 310 (340)
T ss_dssp CSSEEEESCCSSSSSCCS-HHHHSSSEEECSSCSSC
T ss_pred CceEEEeCCcCCCCCCcc-chhhCCCEEEcCcCCcC
Confidence 999999999999998764 677665 999999986
No 3
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=8.8e-61 Score=441.01 Aligned_cols=240 Identities=25% Similarity=0.392 Sum_probs=219.5
Q ss_pred cCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHH
Q 043239 46 ASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSI 125 (286)
Q Consensus 46 ~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~ 125 (286)
++++|+++++..+++++++++++|+||+|++.|+|+||||+++|+++||.|+|+|++++.+||||+++++|++.|++..+
T Consensus 40 l~~ad~i~v~~~~~i~~~~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~ 119 (334)
T 3kb6_A 40 LKKAELISVFVYDKLTEELLSKMPRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRI 119 (334)
T ss_dssp HHHCSEEEECTTSCBCHHHHHTCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred hcCCCEEEEeCCCCCCHHHHhcCCCCcEEEECCcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhccccc
Confidence 35789999988889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC--CcccccCHHHhhcCCCEE
Q 043239 126 DRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV--SYPFYANVSGLAADSDVL 203 (286)
Q Consensus 126 ~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~--~~~~~~~l~e~l~~aDiV 203 (286)
++.++++.|.... ...+++++|+++||||+|.||+.+|+++++|||+|.+||+...... ....+.++++++++||+|
T Consensus 120 ~~~~~~~~~~~~~-~~~~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~l~ell~~sDiv 198 (334)
T 3kb6_A 120 EDRVKKLNFSQDS-EILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVI 198 (334)
T ss_dssp HHHHHTTCCCCCG-GGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEE
T ss_pred ccccccccccccc-ccccceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccchhhhhcCceecCHHHHHhhCCEE
Confidence 9999999987532 2357899999999999999999999999999999999998765421 223467999999999999
Q ss_pred EEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCCcCCc-----------
Q 043239 204 IVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMCQRSC----------- 272 (286)
Q Consensus 204 ~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~~~~~----------- 272 (286)
++|+|+|++|+++|+++.|++||+|++|||+|||++||++||++||++|+|+||+||||+.||++.+++
T Consensus 199 slh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~ 278 (334)
T 3kb6_A 199 SLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNL 278 (334)
T ss_dssp EECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHH
T ss_pred EEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999877663
Q ss_pred ----cc--ccccccccccCC
Q 043239 273 ----LH--WIMLCCLHMLLW 286 (286)
Q Consensus 273 ----l~--~~~~~tph~~~~ 286 (286)
|+ .+.++|||+||+
T Consensus 279 ~~~~L~~~~nvilTPHia~~ 298 (334)
T 3kb6_A 279 KILELACKDNVIITPHIAYY 298 (334)
T ss_dssp HHHHHHTSTTEEECCSCTTC
T ss_pred cchhhccCCCEEECCchhhC
Confidence 22 345999999986
No 4
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=1.2e-59 Score=433.02 Aligned_cols=272 Identities=23% Similarity=0.351 Sum_probs=240.5
Q ss_pred CCCCCchhhhCCCcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhc
Q 043239 13 APGCFNPPLSERFTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRR 92 (286)
Q Consensus 13 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~ 92 (286)
+++...+.|++.++++... .......+.+.+.++++|++++++..++++++++++|+||||++.|+|+||||+++|+++
T Consensus 11 ~~~~~~~~l~~~~~v~~~~-~~~~~~~~~~~~~~~~~d~~i~~~~~~i~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~ 89 (330)
T 4e5n_A 11 VHEEILQLLAPHCELITNQ-TDSTLTREEILRRCRDAQAMMAFMPDRVDADFLQACPELRVIGCALKGFDNFDVDACTAR 89 (330)
T ss_dssp CCHHHHHHHTTTCEEECCC-SSSCCCHHHHHHHHTTCSEEEECTTCCBCHHHHHHCTTCCEEEESSSCCTTBCHHHHHHT
T ss_pred CCHHHHHHHHhCCeEEEec-CCCCCCHHHHHHHhCCCeEEEEeCCCCCCHHHHhhCCCCcEEEECCCcccccCHHHHHhc
Confidence 4556677888888765433 222212444556678999999977789999999999999999999999999999999999
Q ss_pred CeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCC
Q 043239 93 GILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGC 172 (286)
Q Consensus 93 gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~ 172 (286)
||.|+|+|++++.+||||+++++|++.|+++.+++.+++|.|........+.+++|++|||||+|.||+.+|++++++|+
T Consensus 90 gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~ 169 (330)
T 4e5n_A 90 GVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQGWGA 169 (330)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTTSCC
T ss_pred CcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999974322335789999999999999999999999999999
Q ss_pred EEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 043239 173 SIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVH 247 (286)
Q Consensus 173 ~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~ 247 (286)
+|++|+|+..... +. ...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|++
T Consensus 170 ~V~~~d~~~~~~~~~~~~g~-~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~ 248 (330)
T 4e5n_A 170 TLQYHEAKALDTQTEQRLGL-RQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLA 248 (330)
T ss_dssp EEEEECSSCCCHHHHHHHTE-EECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHH
T ss_pred EEEEECCCCCcHhHHHhcCc-eeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHH
Confidence 9999999874321 22 24589999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeeEEEeeccCCC-------CCCcCCcccccc--cccccccCC
Q 043239 248 FLVRGSLVELVLMCLRTS-------LMCQRSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 248 al~~~~i~ga~lDv~~~e-------~~~~~~~l~~~~--~~tph~~~~ 286 (286)
+|++|+|.||+||||+.| |++.+++|+..+ ++|||+|++
T Consensus 249 aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~ 296 (330)
T 4e5n_A 249 ALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSA 296 (330)
T ss_dssp HHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTC
T ss_pred HHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCC
Confidence 999999999999999999 988888888765 999999986
No 5
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=2e-59 Score=434.13 Aligned_cols=269 Identities=21% Similarity=0.290 Sum_probs=235.3
Q ss_pred CCchhhhC-CCcEEecCCCCCCCchHHHHhccCCceEEEEeCC--CCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhc
Q 043239 16 CFNPPLSE-RFTLLDPLLHSADSTHSFLSRHASSVRAILCLGP--SPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRR 92 (286)
Q Consensus 16 ~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~--~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~ 92 (286)
.+.+.|++ .++++.+.+.. . ..+.+.+.++++|++++++. .++++++++++|+||+|++.|+|+||||+++|+++
T Consensus 31 ~~~~~L~~~g~ev~~~~~~~-~-~~~~~~~~~~~ad~li~~~~~~~~~~~~~l~~~p~Lk~i~~~g~G~d~id~~~a~~~ 108 (351)
T 3jtm_A 31 GIRDWLESQGHQYIVTDDKE-G-PDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHIDLQAAAAA 108 (351)
T ss_dssp GCHHHHHHTTCEEEEESCCS-S-TTSHHHHHTTTCSEEEECTTSCCCBCHHHHHHCSSCCEEEESSSCCTTBCHHHHHHT
T ss_pred HHHHHHHHCCCEEEEeCCCC-C-CHHHHHHHhCCCEEEEEccCCCCCCCHHHHhhCCCCeEEEEeCeeecccCHHHHHhc
Confidence 34556665 46766554222 1 23345567789999998542 46899999999999999999999999999999999
Q ss_pred CeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCC
Q 043239 93 GILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGC 172 (286)
Q Consensus 93 gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~ 172 (286)
||.|+|+|++++.+||||++++||++.|++..+++.+++|.|........+.+++|++|||||+|.||+.+|+++++||+
T Consensus 109 gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~G~ 188 (351)
T 3jtm_A 109 GLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGC 188 (351)
T ss_dssp TCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCC
T ss_pred CeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999974211124678999999999999999999999999999
Q ss_pred EEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 043239 173 SIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVH 247 (286)
Q Consensus 173 ~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~ 247 (286)
+|++|+|+..+.. +.....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|++
T Consensus 189 ~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~ 268 (351)
T 3jtm_A 189 NLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVD 268 (351)
T ss_dssp EEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHH
T ss_pred EEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHH
Confidence 9999999864421 34445699999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeeEEEeeccCCCCCCcCCcccccc--cccccccCC
Q 043239 248 FLVRGSLVELVLMCLRTSLMCQRSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 248 al~~~~i~ga~lDv~~~e~~~~~~~l~~~~--~~tph~~~~ 286 (286)
+|++|+|.||+||||+.||++.+++|+.++ ++|||+||+
T Consensus 269 aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~ 309 (351)
T 3jtm_A 269 AVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGT 309 (351)
T ss_dssp HHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGG
T ss_pred HHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCC
Confidence 999999999999999999999999887765 999999985
No 6
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=2e-58 Score=434.04 Aligned_cols=270 Identities=23% Similarity=0.270 Sum_probs=230.2
Q ss_pred CCCCCchhhhCC-CcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhh
Q 043239 13 APGCFNPPLSER-FTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRR 91 (286)
Q Consensus 13 ~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~ 91 (286)
+++...+.|++. |..+.+... .. .++.+.+.++++|++++++.+++++++++++|+||+|++.++|+||||+++|++
T Consensus 24 i~~~~~~~l~~~g~~~v~~~~~-~~-~~~~l~~~~~~~d~l~v~~~~~i~~~~l~~~p~Lk~I~~~~~G~d~IDl~~a~~ 101 (416)
T 3k5p_A 24 ISQTAVEYFKSSGYTNVTHLPK-AL-DKADLIKAISSAHIIGIRSRTQLTEEIFAAANRLIAVGCFSVGTNQVELKAARK 101 (416)
T ss_dssp CCHHHHHHHHHTTCCCEEECSS-CC-CHHHHHHHHTTCSEEEECSSCCBCHHHHHHCTTCCEEEECSSCCTTBCHHHHHH
T ss_pred CCHHHHHHHHHCCCcEEEECCC-CC-CHHHHHHHccCCEEEEEcCCCCCCHHHHHhCCCcEEEEECccccCccCHHHHHh
Confidence 334445566653 523333312 22 244455667899999888888999999999999999999999999999999999
Q ss_pred cCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCC
Q 043239 92 RGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFG 171 (286)
Q Consensus 92 ~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g 171 (286)
+||.|+|+|++++.+|||++++++|++.|+++.+.+.+++|.|.+.. ..+.+++|+++||||+|.||+.+|+++++||
T Consensus 102 ~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~--~~~~el~gktvGIIGlG~IG~~vA~~l~~~G 179 (416)
T 3k5p_A 102 RGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTA--IGSREVRGKTLGIVGYGNIGSQVGNLAESLG 179 (416)
T ss_dssp TTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCC--TTCCCSTTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred cCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccC--CCCccCCCCEEEEEeeCHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999998642 3478999999999999999999999999999
Q ss_pred CEEEEECCCCCCCC-CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHH
Q 043239 172 CSIAYTSRKKKPGV-SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLV 250 (286)
Q Consensus 172 ~~V~~~~r~~~~~~-~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~ 250 (286)
|+|++||++.+... ......++++++++||+|++|+|++++|+++|+++.|++||+|++|||+|||+++|+++|+++|+
T Consensus 180 ~~V~~yd~~~~~~~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~ 259 (416)
T 3k5p_A 180 MTVRYYDTSDKLQYGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQ 259 (416)
T ss_dssp CEEEEECTTCCCCBTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CEEEEECCcchhcccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHH
Confidence 99999999865443 33456799999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCeeEEEeeccCCCCCCcC----Ccccccc--cccccccCC
Q 043239 251 RGSLVELVLMCLRTSLMCQR----SCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 251 ~~~i~ga~lDv~~~e~~~~~----~~l~~~~--~~tph~~~~ 286 (286)
+|+|.||+||||+.||++.+ ++|+..+ ++|||+||+
T Consensus 260 ~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~ 301 (416)
T 3k5p_A 260 EGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGS 301 (416)
T ss_dssp TTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTC
T ss_pred cCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCC
Confidence 99999999999999998765 5565544 999999986
No 7
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=3.9e-59 Score=430.00 Aligned_cols=264 Identities=23% Similarity=0.347 Sum_probs=230.4
Q ss_pred chhhhCCCcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcCeEEE
Q 043239 18 NPPLSERFTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRGILVT 97 (286)
Q Consensus 18 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~ 97 (286)
.+++.+.+++..+. . ...+.+.+.++++|+++++...++++++++++|+||||++.|+|+||||+++|+++||.|+
T Consensus 16 ~~~~~~~~~~~~~~-~---~~~~e~~~~~~~~d~li~~~~~~i~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~ 91 (334)
T 2pi1_A 16 YQEALKDLSLKIYT-T---DVSKVPENELKKAELISVFVYDKLTEELLSKMPRLKLIHTRSVGFDHIDLDYCKKKGILVT 91 (334)
T ss_dssp HHHHTTTSEEEECS-S---CGGGSCHHHHHHCSEEEECTTSCBCHHHHTTCTTCCEEEESSSCCTTBCHHHHHHHTCEEE
T ss_pred HHHHhhcCCEEEEC-C---CCcHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEECCccccccCHHHHHHCCeEEE
Confidence 34555666554432 1 1223344455789999997778999999999999999999999999999999999999999
Q ss_pred ecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEE
Q 043239 98 NAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYT 177 (286)
Q Consensus 98 n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~ 177 (286)
|+|++++.+||||++++||++.|+++.+++.+++|.|.... ...+.+|+|++|||||+|.||+++|++++++|++|++|
T Consensus 92 n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~-~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~ 170 (334)
T 2pi1_A 92 HIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDS-EILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCY 170 (334)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCG-GGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred ECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCcccc-CccceeccCceEEEECcCHHHHHHHHHHHHCcCEEEEE
Confidence 99999999999999999999999999999999999997531 12578999999999999999999999999999999999
Q ss_pred CCCCCCCC--CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 178 SRKKKPGV--SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 178 ~r~~~~~~--~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
+|+..... ......++++++++||+|++|+|++++|+++++++.|++||+|++|||+|||+++|+++|+++|++|+|.
T Consensus 171 d~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~ 250 (334)
T 2pi1_A 171 DVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp CSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEE
T ss_pred CCCcchhhHhcCceecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCce
Confidence 99876431 1123457999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeccCCCCC---------------CcCCcccccc--cccccccCC
Q 043239 256 ELVLMCLRTSLM---------------CQRSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 256 ga~lDv~~~e~~---------------~~~~~l~~~~--~~tph~~~~ 286 (286)
||+||||+.||+ +.+++|+..+ ++|||+|++
T Consensus 251 gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilTPHia~~ 298 (334)
T 2pi1_A 251 GLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIAYY 298 (334)
T ss_dssp EEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTC
T ss_pred EEEeecCCCCCCccccccccccccccCccCChhhcCCCEEECCccccC
Confidence 999999999997 4566676554 999999986
No 8
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=7.5e-58 Score=430.96 Aligned_cols=267 Identities=21% Similarity=0.210 Sum_probs=224.8
Q ss_pred CCCchhhhCC-C-cEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhc
Q 043239 15 GCFNPPLSER-F-TLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRR 92 (286)
Q Consensus 15 ~~~~~~l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~ 92 (286)
+...+.|.+. + ++.... . ..+ ++.+.+.++++|++++++.+++++++++++|+||+|++.++|+||||+++|+++
T Consensus 15 ~~~~~~l~~~~~~~v~~~~-~-~~~-~~~l~~~~~~~d~l~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~iD~~~a~~~ 91 (404)
T 1sc6_A 15 QKALESLRAAGYTNIEFHK-G-ALD-DEQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGAFAIGTNQVDLDAAAKR 91 (404)
T ss_dssp HHHHHHHHHTTCCCEEECS-S-CCC-HHHHHHHTTSCSEEEECSSCCBCHHHHHHCSSCCEEEECSSCCTTBCHHHHHHT
T ss_pred HHHHHHHHhCCCcEEEEcC-C-CCC-HHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCcEEEECCcccCccCHHHHHhC
Confidence 3344556553 5 454332 1 222 344555678999998888889999999999999999999999999999999999
Q ss_pred CeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCC
Q 043239 93 GILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGC 172 (286)
Q Consensus 93 gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~ 172 (286)
||.|+|+|++++.+||||++++||++.|+++.+...+++|.|.+. ...+.+++|+++||||+|.||+.+|++++++||
T Consensus 92 GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~--~~~~~el~gktlGiIGlG~IG~~vA~~l~~~G~ 169 (404)
T 1sc6_A 92 GIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKL--AAGSFEARGKKLGIIGYGHIGTQLGILAESLGM 169 (404)
T ss_dssp TCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-------CCCSTTCEEEEECCSHHHHHHHHHHHHTTC
T ss_pred CCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCcccc--CCCccccCCCEEEEEeECHHHHHHHHHHHHCCC
Confidence 999999999999999999999999999999999999999999753 234789999999999999999999999999999
Q ss_pred EEEEECCCCCCCCC-cccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 043239 173 SIAYTSRKKKPGVS-YPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVR 251 (286)
Q Consensus 173 ~V~~~~r~~~~~~~-~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~ 251 (286)
+|++|||+.....+ .....++++++++||+|++|+|++++|+++++++.|++||+|++|||+|||+++|+++|+++|++
T Consensus 170 ~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~ 249 (404)
T 1sc6_A 170 YVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALAS 249 (404)
T ss_dssp EEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHT
T ss_pred EEEEEcCCchhccCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHc
Confidence 99999998765443 34456999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEeeccCCCCCCc----CCcccccc--cccccccCC
Q 043239 252 GSLVELVLMCLRTSLMCQ----RSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 252 ~~i~ga~lDv~~~e~~~~----~~~l~~~~--~~tph~~~~ 286 (286)
|+++||+||||+.||++. +++|+..+ ++|||+|++
T Consensus 250 g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~ 290 (404)
T 1sc6_A 250 KHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGS 290 (404)
T ss_dssp TSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCC
T ss_pred CCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCC
Confidence 999999999999999864 35666544 999999985
No 9
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=2.4e-58 Score=422.42 Aligned_cols=260 Identities=23% Similarity=0.318 Sum_probs=227.5
Q ss_pred Cchhh-hCCCcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcCeE
Q 043239 17 FNPPL-SERFTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRGIL 95 (286)
Q Consensus 17 ~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~ 95 (286)
..+.| .+.++.+.+... .+ .+...+.++++|+++++ ..+++++++++|+||||++.|+|+|+||.+++++ ||.
T Consensus 18 ~~~~L~~~~~p~~~~~~~-~~--~~~~~~~~~~ad~li~~--~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~-gI~ 91 (324)
T 3hg7_A 18 YERLLKAAHLPHLRILRA-DN--QSDAEKLIGEAHILMAE--PARAKPLLAKANKLSWFQSTYAGVDVLLDARCRR-DYQ 91 (324)
T ss_dssp HHHHHHHSCCTTEEEEEC-SS--HHHHHHHGGGCSEEEEC--HHHHGGGGGGCTTCCEEEESSSCCGGGSCTTSCC-SSE
T ss_pred HHHHHhhccCCCeEEEeC-CC--hhHHHHHhCCCEEEEEC--CCCCHHHHhhCCCceEEEECCCCCCccChHHHhC-CEE
Confidence 34556 555543333211 11 33445567899999984 3466889999999999999999999999988754 999
Q ss_pred EEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEE
Q 043239 96 VTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIA 175 (286)
Q Consensus 96 v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~ 175 (286)
|+|+|++++.+||||+++++|++.|+++.+.+.+++|.|... .+.+++|++|||||+|.||+++|+++++||++|+
T Consensus 92 v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~----~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~ 167 (324)
T 3hg7_A 92 LTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSH----PYQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVL 167 (324)
T ss_dssp EECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC----CCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred EEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCC----CCcccccceEEEEEECHHHHHHHHHHHhCCCEEE
Confidence 999999999999999999999999999999999999999853 4678999999999999999999999999999999
Q ss_pred EECCCCCCCCCc---ccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 176 YTSRKKKPGVSY---PFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 176 ~~~r~~~~~~~~---~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
+|+|+.+..... ....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|
T Consensus 168 ~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 247 (324)
T 3hg7_A 168 GVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTG 247 (324)
T ss_dssp EECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcC
Confidence 999987654432 23568999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEeeccCCCCCCcCCcccccc--cccccccCC
Q 043239 253 SLVELVLMCLRTSLMCQRSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 253 ~i~ga~lDv~~~e~~~~~~~l~~~~--~~tph~~~~ 286 (286)
+|+||+||||+.||++.+++|+..+ ++|||+||+
T Consensus 248 ~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~ 283 (324)
T 3hg7_A 248 KLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAY 283 (324)
T ss_dssp SSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSC
T ss_pred CceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccc
Confidence 9999999999999999999997665 999999986
No 10
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=6.7e-58 Score=424.21 Aligned_cols=264 Identities=23% Similarity=0.356 Sum_probs=233.4
Q ss_pred hhhhCCCcEEecCCCCCCCchHHHHhccCCceEEEE-eCCCCCCHHHhccCCCccEEEEcCCCC----CcCChhHHhhcC
Q 043239 19 PPLSERFTLLDPLLHSADSTHSFLSRHASSVRAILC-LGPSPLTSDTLSLLPALEIVVGSTAGI----DHVDLQECRRRG 93 (286)
Q Consensus 19 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~-~~~~~~~~~~l~~~~~Lk~i~~~~~G~----d~id~~~~~~~g 93 (286)
+.+. .+++..+. .... .++.+.+.++++|++++ +...++++++++++|+||+|++.|+|+ ||||+++|+++|
T Consensus 22 ~~l~-~~~v~~~~-~~~~-~~~~l~~~~~~ad~li~~~~~~~~~~~~l~~~~~Lk~I~~~g~G~~~~~d~id~~~a~~~g 98 (352)
T 3gg9_A 22 SLLQ-DHEVKVFN-NTVK-GVGQLAARVADVEALVLIRERTRVTRQLLDRLPKLKIISQTGRVSRDAGGHIDLEACTDKG 98 (352)
T ss_dssp GGGT-TSEEEECC-SCCC-SHHHHHHHTTTCSEEEECTTSSCBCHHHHTTCTTCCEEEESSCCCCSSSCSBCHHHHHHHT
T ss_pred hhhc-CceEEEec-CCCC-CHHHHHHHhcCCeEEEEeCCCCCCCHHHHhhCCCCeEEEEeCcccCCccCcccHHHHHhCC
Confidence 3444 47766554 2222 23445566789999998 456889999999999999999999999 999999999999
Q ss_pred eEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCC--------CCCCcccCCCCEEEEEcCChHHHHHHH
Q 043239 94 ILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHG--------AYPLGSTLGGKRVGIVGLGSIGSEVAK 165 (286)
Q Consensus 94 I~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~--------~~~~~~~l~g~~vgIiG~G~iG~~~A~ 165 (286)
|.|+|+|++ +.+||||+++++|++.|+++.+++.+++|.|.... ....+.+++|++|||||+|.||+++|+
T Consensus 99 I~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~ 177 (352)
T 3gg9_A 99 VVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAG 177 (352)
T ss_dssp CEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHH
T ss_pred eEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHH
Confidence 999999999 99999999999999999999999999999998642 113578999999999999999999999
Q ss_pred HhccCCCEEEEECCCCCCC----CCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccC
Q 043239 166 RLVPFGCSIAYTSRKKKPG----VSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALID 241 (286)
Q Consensus 166 ~l~~~g~~V~~~~r~~~~~----~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd 241 (286)
+++++|++|++|||+.... .++....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|
T Consensus 178 ~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd 257 (352)
T 3gg9_A 178 YGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVE 257 (352)
T ss_dssp HHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBC
T ss_pred HHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhc
Confidence 9999999999999975321 244445699999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCeeEEEeeccCCCCCCcCCcccccc--cccccccCC
Q 043239 242 EKELVHFLVRGSLVELVLMCLRTSLMCQRSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 242 ~~al~~al~~~~i~ga~lDv~~~e~~~~~~~l~~~~--~~tph~~~~ 286 (286)
+++|+++|++|+|.||+||||+.||++.+++|+..+ ++|||+|++
T Consensus 258 ~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~ 304 (352)
T 3gg9_A 258 ENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYV 304 (352)
T ss_dssp TTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTC
T ss_pred HHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEECCCCCCC
Confidence 999999999999999999999999999999888765 999999985
No 11
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=1.2e-58 Score=424.78 Aligned_cols=236 Identities=19% Similarity=0.264 Sum_probs=218.5
Q ss_pred cCCceEEEEeCCCCCCHHHh-ccCCCccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchH
Q 043239 46 ASSVRAILCLGPSPLTSDTL-SLLPALEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSS 124 (286)
Q Consensus 46 ~~~~d~i~~~~~~~~~~~~l-~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~ 124 (286)
++++|+++++. .++ ++++ +++|+||||++.|+|+|+||+++++++||.|+|+|++++.+||||+++++|++.|++..
T Consensus 38 ~~~ad~l~~~~-~~~-~~~l~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~ 115 (324)
T 3evt_A 38 YDQIEVMYGNH-PLL-KTILARPTNQLKFVQVISAGVDYLPLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHA 115 (324)
T ss_dssp GGGEEEEESCC-THH-HHHHHSTTCCCCEEECSSSCCTTSCHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred hCCcEEEEECC-cCh-HHHHHhhCCCceEEEECCccccccCHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhH
Confidence 46899998864 456 8999 78999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCCc---ccccCHHHhhcCC
Q 043239 125 I-DRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSY---PFYANVSGLAADS 200 (286)
Q Consensus 125 ~-~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~---~~~~~l~e~l~~a 200 (286)
+ .+.++++.|.... .+.+++|++|||||+|.||+.+|++++++|++|++|+|+.+..... ....++++++++|
T Consensus 116 ~~~~~~~~~~W~~~~---~~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~a 192 (324)
T 3evt_A 116 AWLNQRGARQWALPM---TTSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATA 192 (324)
T ss_dssp HHHHHTTTCCSSCSS---CCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHC
T ss_pred HHHHHHhcCCcccCC---CCccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhC
Confidence 9 9999999998541 4789999999999999999999999999999999999987665432 2346899999999
Q ss_pred CEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCCcCCcccccc--c
Q 043239 201 DVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMCQRSCLHWIM--L 278 (286)
Q Consensus 201 DiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~~~~~l~~~~--~ 278 (286)
|+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||+.||++.+++|+..+ +
T Consensus 193 DvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvi 272 (324)
T 3evt_A 193 NFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVL 272 (324)
T ss_dssp SEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEE
T ss_pred CEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998766 9
Q ss_pred ccccccCC
Q 043239 279 CCLHMLLW 286 (286)
Q Consensus 279 ~tph~~~~ 286 (286)
+|||+||+
T Consensus 273 lTPHia~~ 280 (324)
T 3evt_A 273 ITPHISGQ 280 (324)
T ss_dssp ECCSCTTC
T ss_pred EcCccccC
Confidence 99999985
No 12
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=1.8e-57 Score=422.26 Aligned_cols=266 Identities=18% Similarity=0.270 Sum_probs=227.4
Q ss_pred CCCCchhhhCCCcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEc-CCCCCcCChhHHhhc
Q 043239 14 PGCFNPPLSERFTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGS-TAGIDHVDLQECRRR 92 (286)
Q Consensus 14 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~-~~G~d~id~~~~~~~ 92 (286)
.+...+.|.+.++++... +.+.++++.+...++++++. ..++++++++++|+||+|++. ++|+||||+++|+++
T Consensus 45 ~~~~~~~L~~~~~v~~~~---~~~~~e~~~~~~~~~~~i~~--~~~i~~~~l~~~p~Lk~I~~~~~~G~d~iD~~~a~~~ 119 (365)
T 4hy3_A 45 SDEARAALHSKYEIVEAD---PENIAGLGDDILGRARYIIG--QPPLSAETLARMPALRSILNVESNLLNNMPYEVLFQR 119 (365)
T ss_dssp CHHHHHHHHHHSEEEECC---GGGGGGSCTTHHHHEEEEEE--CCCCCHHHHTTCTTCCEEECCSSSCCSCSCTTHHHHS
T ss_pred CHHHHHHHhCCcEEEECC---CCChHHHHHHhhCCeEEEEe--CCCCCHHHHhhCCCCeEEEEecccccCcccHHHHhcC
Confidence 344567788888887433 22223333344457788775 368999999999999999975 899999999999999
Q ss_pred CeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCC-CCCCcccCCCCEEEEEcCChHHHHHHHHhccCC
Q 043239 93 GILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHG-AYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFG 171 (286)
Q Consensus 93 gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~-~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g 171 (286)
||.|+|+|++++.+||||+++++|++.|++..+.+.+++|.|.... ....+.+++|++|||||+|.||+.+|+++++||
T Consensus 120 GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~fG 199 (365)
T 4hy3_A 120 GIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSGFR 199 (365)
T ss_dssp CCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTTSC
T ss_pred CeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhhCC
Confidence 9999999999999999999999999999999999999999854221 123578999999999999999999999999999
Q ss_pred CEEEEECCCCCCC----CCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 043239 172 CSIAYTSRKKKPG----VSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVH 247 (286)
Q Consensus 172 ~~V~~~~r~~~~~----~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~ 247 (286)
++|++||++.... .++ ...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|++
T Consensus 200 ~~V~~~d~~~~~~~~~~~g~-~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~ 278 (365)
T 4hy3_A 200 ARIRVFDPWLPRSMLEENGV-EPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMA 278 (365)
T ss_dssp CEEEEECSSSCHHHHHHTTC-EECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHH
T ss_pred CEEEEECCCCCHHHHhhcCe-eeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHH
Confidence 9999999985432 122 35699999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeeEEEeeccCCCCCCcCCcccccc--cccccccCC
Q 043239 248 FLVRGSLVELVLMCLRTSLMCQRSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 248 al~~~~i~ga~lDv~~~e~~~~~~~l~~~~--~~tph~~~~ 286 (286)
+|++|+|. |+||||+.||++.+++|+..+ ++|||+||+
T Consensus 279 aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~ 318 (365)
T 4hy3_A 279 AVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHRAGA 318 (365)
T ss_dssp HHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSCSSC
T ss_pred HHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCccccC
Confidence 99999998 899999999999999888766 999999986
No 13
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=3.4e-57 Score=417.74 Aligned_cols=244 Identities=18% Similarity=0.266 Sum_probs=217.4
Q ss_pred HHhccCCceEEEEeCCCCCCHH-HhccCC--CccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHH
Q 043239 42 LSRHASSVRAILCLGPSPLTSD-TLSLLP--ALEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDV 118 (286)
Q Consensus 42 ~~~~~~~~d~i~~~~~~~~~~~-~l~~~~--~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~ 118 (286)
+.+.++++|+++++..++++++ +++++| +||+|++.|+|+||||+++|+++||.|+|+|++++.+||||+++++|++
T Consensus 39 ~~~~~~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~ 118 (343)
T 2yq5_A 39 TVDLAEGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLRIVGFNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYL 118 (343)
T ss_dssp GGGGGTTCSEEEECCSSCBCCHHHHHHHHHTTCCEEEESSSCCTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCcEEEEcCCCCcCHHHHHHhccccCceEEEECceeecccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHH
Confidence 4466789999999877899999 999986 6999999999999999999999999999999999999999999999999
Q ss_pred HhcchHHHHHHH-cCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-CcccccCHHHh
Q 043239 119 LRRVSSIDRFVR-NGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-SYPFYANVSGL 196 (286)
Q Consensus 119 ~R~~~~~~~~~~-~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-~~~~~~~l~e~ 196 (286)
.|++..+.+.++ +|.|.... ...+++++|++|||||+|.||+.+|+++++||++|++|+|+.+... ......+++++
T Consensus 119 ~R~~~~~~~~~~~~g~~~w~~-~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~el 197 (343)
T 2yq5_A 119 LRKIGEFRYRMDHDHDFTWPS-NLISNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPEFEPFLTYTDFDTV 197 (343)
T ss_dssp HHTHHHHHHHHHHHCCCCCCG-GGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGGGTTTCEECCHHHH
T ss_pred HhchHHHHHHHHHcCCccccc-CCCccccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhhhhccccccCHHHH
Confidence 999999999999 88775421 2357899999999999999999999999999999999999876432 22334599999
Q ss_pred hcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCC--CCcC----
Q 043239 197 AADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSL--MCQR---- 270 (286)
Q Consensus 197 l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~--~~~~---- 270 (286)
+++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||+.|| ++.+
T Consensus 198 l~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~ 277 (343)
T 2yq5_A 198 LKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTD 277 (343)
T ss_dssp HHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCT
T ss_pred HhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 4444
Q ss_pred -------Ccccccc--cccccccCC
Q 043239 271 -------SCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 271 -------~~l~~~~--~~tph~~~~ 286 (286)
++|+..+ ++|||+|++
T Consensus 278 ~~l~~~~~pL~~~~nvilTPHia~~ 302 (343)
T 2yq5_A 278 SEIPEDYKTLAKMPNVVITPHSAFY 302 (343)
T ss_dssp TTSCHHHHHHTTCTTEEECSSCTTC
T ss_pred cccccchhHHhcCCCEEECCccccc
Confidence 2455444 999999986
No 14
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=2e-55 Score=401.96 Aligned_cols=269 Identities=29% Similarity=0.432 Sum_probs=237.1
Q ss_pred CCCCCchhhhCC-CcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhh
Q 043239 13 APGCFNPPLSER-FTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRR 91 (286)
Q Consensus 13 ~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~ 91 (286)
+++...+.+.+. +++.... .... ..+.+.+.++++|+++++...++++++++++|+||||++.|+|+||||++++++
T Consensus 9 ~~~~~~~~l~~~g~~v~~~~-~~~~-~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~ 86 (311)
T 2cuk_A 9 LPGKALDRLRERGLEVEVHR-GLFL-PKAELLKRVEGAVGLIPTVEDRIDAEVMDRAKGLKVIACYSVGVDHVDLEAARE 86 (311)
T ss_dssp CSSSTTHHHHHTTCEEEECC-SSCC-CHHHHHHHHTTCSEEECCTTSCBCHHHHHHSTTCCEEECSSSCCTTBCHHHHHT
T ss_pred CCHHHHHHHHhcCCeEEEec-CCCC-CHHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEECCcCccccCHHHHHh
Confidence 445567777776 7765433 2222 234455567899999987667899999999999999999999999999999999
Q ss_pred cCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCC-CCCCcccCCCCEEEEEcCChHHHHHHHHhccC
Q 043239 92 RGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHG-AYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPF 170 (286)
Q Consensus 92 ~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~-~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~ 170 (286)
+||.|+|+|++++.+||||++++||++.|+++.+++.+++|.|.... ....+.++.|++|||||+|.||+.+|++++++
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 166 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAF 166 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999996321 11247799999999999999999999999999
Q ss_pred CCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHH
Q 043239 171 GCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLV 250 (286)
Q Consensus 171 g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~ 250 (286)
|++|++|+|+.++.. . ...++++++++||+|++|+|.+++|+++++++.++.||+|+++||+|||+++|+++|.++|+
T Consensus 167 G~~V~~~d~~~~~~~-~-~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~ 244 (311)
T 2cuk_A 167 GMRVVYHARTPKPLP-Y-PFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR 244 (311)
T ss_dssp TCEEEEECSSCCSSS-S-CBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT
T ss_pred CCEEEEECCCCcccc-c-ccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh
Confidence 999999999876654 2 35689999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCeeEEEeeccCCCCCCcCCcccccc--cccccccCC
Q 043239 251 RGSLVELVLMCLRTSLMCQRSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 251 ~~~i~ga~lDv~~~e~~~~~~~l~~~~--~~tph~~~~ 286 (286)
|+|.||++|||+.||++.+++|+... ++|||++++
T Consensus 245 -g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~ 281 (311)
T 2cuk_A 245 -GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSA 281 (311)
T ss_dssp -TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTC
T ss_pred -CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCC
Confidence 99999999999999998888888765 999999985
No 15
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=1.1e-55 Score=413.89 Aligned_cols=246 Identities=24% Similarity=0.339 Sum_probs=222.1
Q ss_pred HHHhccCCceEEEEeC--CCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHH
Q 043239 41 FLSRHASSVRAILCLG--PSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDV 118 (286)
Q Consensus 41 ~~~~~~~~~d~i~~~~--~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~ 118 (286)
.+.+.+.++|++++.. ..++++++++++|+||+|++.++|+||||+++|+++||.|+|+|++++.+||||++++||++
T Consensus 82 ~l~~~l~~ad~li~~~~~~~~i~~~~l~~~p~Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~~g~~~~~VAE~al~liL~~ 161 (393)
T 2nac_A 82 VFERELVDADVVISQPFWPAYLTPERIAKAKNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSL 161 (393)
T ss_dssp HHHHHHTTCSEEEEBTTBCCCBCHHHHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHH
T ss_pred HHHHhccCCCEEEEcCccCCCCCHHHHhhCCCCcEEEEcCccccccCHHHHhcCCEEEEeCCCcccHHHHHHHHHHHHHH
Confidence 3445568999999853 35799999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCH
Q 043239 119 LRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANV 193 (286)
Q Consensus 119 ~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l 193 (286)
.|++..+++.+++|.|........+.+++|++|||||+|.||+.+|+++++||++|++|+++..+.. +.....++
T Consensus 162 ~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l 241 (393)
T 2nac_A 162 VRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATR 241 (393)
T ss_dssp HTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSH
T ss_pred HhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCH
Confidence 9999999999999999632111236789999999999999999999999999999999999865422 33334689
Q ss_pred HHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCCcCCcc
Q 043239 194 SGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMCQRSCL 273 (286)
Q Consensus 194 ~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~~~~~l 273 (286)
++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||+.||++.+++|
T Consensus 242 ~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~pL 321 (393)
T 2nac_A 242 EDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPW 321 (393)
T ss_dssp HHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGG
T ss_pred HHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cccc--cccccccCC
Q 043239 274 HWIM--LCCLHMLLW 286 (286)
Q Consensus 274 ~~~~--~~tph~~~~ 286 (286)
+..+ ++|||+|++
T Consensus 322 ~~~~nvilTPHia~~ 336 (393)
T 2nac_A 322 RTMPYNGMTPHISGT 336 (393)
T ss_dssp GTSTTBCCCCSCTTC
T ss_pred HcCCCEEECCCCCcC
Confidence 8765 999999985
No 16
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=3.6e-56 Score=414.81 Aligned_cols=268 Identities=21% Similarity=0.246 Sum_probs=229.9
Q ss_pred CchhhhC-CCcEEecCCCCCCCchHHHHhccCCceEEEEeC--CCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhc-
Q 043239 17 FNPPLSE-RFTLLDPLLHSADSTHSFLSRHASSVRAILCLG--PSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRR- 92 (286)
Q Consensus 17 ~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~--~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~- 92 (286)
..+.+.+ .+++..+. ..... .+.+.+.++++|+++++. ..++++++++++|+||+|++.++|+||||+++|+++
T Consensus 30 ~~~~l~~~~~~v~~~~-~~~~~-~~~~~~~~~~~d~~i~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~~ 107 (364)
T 2j6i_A 30 IANWLKDQGHELITTS-DKEGG-NSVLDQHIPDADIIITTPFHPAYITKERIDKAKKLKLVVVAGVGSDHIDLDYINQTG 107 (364)
T ss_dssp CHHHHHHTTCEEEEES-CCSST-TSHHHHHGGGCSEEEECTTSCCCBCHHHHHHCTTCCEEEESSSCCTTBCHHHHHHHT
T ss_pred HHHHHHhCCCEEEEcC-CCCCC-HHHHHHHhhCCeEEEecCcCCCCCCHHHHhhCCCCeEEEECCcccccccHHHHHhcC
Confidence 4455554 35655443 22112 233445668999998853 246899999999999999999999999999999999
Q ss_pred -CeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCC
Q 043239 93 -GILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFG 171 (286)
Q Consensus 93 -gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g 171 (286)
||.|+|+|++++.+||||++++||++.|+++.+++.+++|.|........+.+++|++|||||+|.||+.+|++++++|
T Consensus 108 ~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~G~IG~~vA~~l~~~G 187 (364)
T 2j6i_A 108 KKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAGRIGYRVLERLVPFN 187 (364)
T ss_dssp CCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGC
T ss_pred CCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEEEEECcCHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999996311012467899999999999999999999999999
Q ss_pred CE-EEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHH
Q 043239 172 CS-IAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKEL 245 (286)
Q Consensus 172 ~~-V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al 245 (286)
++ |++|+|+..+.. +.....++++++++||+|++|+|.+++|+++++++.|+.||+|++|||+|||+++|+++|
T Consensus 188 ~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL 267 (364)
T 2j6i_A 188 PKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDV 267 (364)
T ss_dssp CSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHH
T ss_pred CcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHH
Confidence 97 999998775421 333346899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeeEEEeeccCCCCCCcCCcccc-------cccccccccCC
Q 043239 246 VHFLVRGSLVELVLMCLRTSLMCQRSCLHW-------IMLCCLHMLLW 286 (286)
Q Consensus 246 ~~al~~~~i~ga~lDv~~~e~~~~~~~l~~-------~~~~tph~~~~ 286 (286)
+++|++|+|.||+||||+.||++.+++|+. +.++|||+|++
T Consensus 268 ~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia~~ 315 (364)
T 2j6i_A 268 AAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSGT 315 (364)
T ss_dssp HHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCGGG
T ss_pred HHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccCcC
Confidence 999999999999999999999999888764 46999999985
No 17
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.9e-56 Score=408.38 Aligned_cols=244 Identities=24% Similarity=0.377 Sum_probs=221.5
Q ss_pred hHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHH
Q 043239 39 HSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDV 118 (286)
Q Consensus 39 ~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~ 118 (286)
.+.+.+.++++|+++++..+++++++++++|+||||++.|+|+|+||+++++++||.|+|+|++++.+||||+++++|++
T Consensus 58 ~~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~ 137 (335)
T 2g76_A 58 KEELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCL 137 (335)
T ss_dssp HHHHHHHGGGCSEEEECSSSCBCHHHHHHCSSCCEEEESSSSCTTBCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCceEEEEcCCCCCCHHHHhhCCCCcEEEECCCCcchhChHHHHhCCeEEEECCCccchHHHHHHHHHHHHH
Confidence 33444566899999998777899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC----CCcccccCHH
Q 043239 119 LRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG----VSYPFYANVS 194 (286)
Q Consensus 119 ~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~----~~~~~~~~l~ 194 (286)
.|+++.+++.+++|.|.+. ...+.++.|++|||||+|.||+.+|++++++|++|++|||+..+. .+.. ..+++
T Consensus 138 ~R~~~~~~~~~~~g~W~~~--~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~ 214 (335)
T 2g76_A 138 ARQIPQATASMKDGKWERK--KFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQ-QLPLE 214 (335)
T ss_dssp HHTHHHHHHHHHTTCCCTG--GGCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCE-ECCHH
T ss_pred HhchHHHHHHHHcCCCCcc--CCCCcCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCce-eCCHH
Confidence 9999999999999999743 124678999999999999999999999999999999999976542 1222 35899
Q ss_pred HhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCCcCCccc
Q 043239 195 GLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMCQRSCLH 274 (286)
Q Consensus 195 e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~~~~~l~ 274 (286)
+++++||+|++|+|.+++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||+.|| +.+++|+
T Consensus 215 ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP-~~~~~L~ 293 (335)
T 2g76_A 215 EIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRDRALV 293 (335)
T ss_dssp HHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSS-CSCCHHH
T ss_pred HHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCC-CCCchHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 4567777
Q ss_pred ccc--cccccccCC
Q 043239 275 WIM--LCCLHMLLW 286 (286)
Q Consensus 275 ~~~--~~tph~~~~ 286 (286)
..+ ++|||+|++
T Consensus 294 ~~~nvilTPH~~~~ 307 (335)
T 2g76_A 294 DHENVISCPHLGAS 307 (335)
T ss_dssp HSTTEEECSSCTTC
T ss_pred hCCCEEECCcCCCC
Confidence 554 999999986
No 18
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=3.3e-56 Score=410.86 Aligned_cols=243 Identities=19% Similarity=0.259 Sum_probs=218.0
Q ss_pred HHhccCCceEEEEeCCCCCCHHHhccCCC--ccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHH
Q 043239 42 LSRHASSVRAILCLGPSPLTSDTLSLLPA--LEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDVL 119 (286)
Q Consensus 42 ~~~~~~~~d~i~~~~~~~~~~~~l~~~~~--Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~ 119 (286)
+.+.++++|+++++..+++++++++++|+ ||||++.|+|+||||+++++++||.|+|+|++++.+||||++++||++.
T Consensus 40 ~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~ 119 (333)
T 1j4a_A 40 TVALAKGADGVVVYQQLDYIAETLQALADNGITKMSLRNVGVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARIL 119 (333)
T ss_dssp TGGGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCcEEEEcCCCCCCHHHHHhccccCCeEEEECCcccccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHH
Confidence 44556899999997777899999999998 9999999999999999999999999999999999999999999999999
Q ss_pred hcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC--CcccccCHHHhh
Q 043239 120 RRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV--SYPFYANVSGLA 197 (286)
Q Consensus 120 R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~--~~~~~~~l~e~l 197 (286)
|++..+++.+++|.|... ...+.++.|++|||||+|.||+.+|++++++|++|++|+++.++.. ......++++++
T Consensus 120 R~~~~~~~~~~~g~w~~~--~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~l~ell 197 (333)
T 1j4a_A 120 RQDKAMDEKVARHDLRWA--PTIGREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLY 197 (333)
T ss_dssp HTHHHHHHHHHTTBCCCT--TCCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHH
T ss_pred cCHHHHHHHHHcCCCccC--CcccccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchhHHhhCeecCCHHHHH
Confidence 999999999999999643 2357899999999999999999999999999999999999875421 122234899999
Q ss_pred cCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCC--CCcCC----
Q 043239 198 ADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSL--MCQRS---- 271 (286)
Q Consensus 198 ~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~--~~~~~---- 271 (286)
++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||+.|| ++.++
T Consensus 198 ~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~ 277 (333)
T 1j4a_A 198 KQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKE 277 (333)
T ss_dssp HHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSC
T ss_pred hhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCcccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 34433
Q ss_pred -------cccc--cccccccccCC
Q 043239 272 -------CLHW--IMLCCLHMLLW 286 (286)
Q Consensus 272 -------~l~~--~~~~tph~~~~ 286 (286)
+|+. +.++|||+|++
T Consensus 278 ~~~p~~~~L~~~~nvilTPHia~~ 301 (333)
T 1j4a_A 278 FPDARLADLIARPNVLVTPKTAFY 301 (333)
T ss_dssp CSCHHHHHHHHCTTEEECSSCTTC
T ss_pred CCccchhhHHhCCCEEECCccccC
Confidence 3554 44999999986
No 19
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=1.7e-55 Score=405.65 Aligned_cols=270 Identities=39% Similarity=0.651 Sum_probs=238.7
Q ss_pred CCCCCchhhhCCCcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhc
Q 043239 13 APGCFNPPLSERFTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRR 92 (286)
Q Consensus 13 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~ 92 (286)
+++...+.+.+.+++..+. . ....++++.+.++++|++++++..++++++++++|+||+|++.|+|+||||+++++++
T Consensus 32 ~~~~~~~~l~~~~~~~~~~-~-~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~p~Lk~I~~~~~G~d~id~~~~~~~ 109 (333)
T 3ba1_A 32 MSTYLEQELDKRFKLFRYW-T-QPAQRDFLALQAESIRAVVGNSNAGADAELIDALPKLEIVSSFSVGLDKVDLIKCEEK 109 (333)
T ss_dssp CCHHHHHHHHHHSEEEEGG-G-CSSHHHHHHHHTTTEEEEEECSSSCBCHHHHHHCTTCCEEEESSSCCTTBCHHHHHHH
T ss_pred CCHHHHHHHHhcCCEEEec-C-CCChHHHHHHHhCCCEEEEEcCCCCCCHHHHhhCCCCcEEEEcCccccccCHHHHHhC
Confidence 3444556677777765543 1 1234555666678999999877778999999999999999999999999999999999
Q ss_pred CeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCC
Q 043239 93 GILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGC 172 (286)
Q Consensus 93 gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~ 172 (286)
||.|+|+|++++.+||||++++||++.|++..+.+.+++|.|... ....+.++.|++|||||+|.||+.+|++++++|+
T Consensus 110 gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~-~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~ 188 (333)
T 3ba1_A 110 GVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFG-DFKLTTKFSGKRVGIIGLGRIGLAVAERAEAFDC 188 (333)
T ss_dssp TCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGC-CCCCCCCCTTCCEEEECCSHHHHHHHHHHHTTTC
T ss_pred CcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCcc-ccccccccCCCEEEEECCCHHHHHHHHHHHHCCC
Confidence 999999999999999999999999999999999999999999642 2235789999999999999999999999999999
Q ss_pred EEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 173 SIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 173 ~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
+|++|+|+.+...+.....++++++++||+|++|+|.+++++++++++.++.||+|++|||+|||.++|+++|+++|++|
T Consensus 189 ~V~~~dr~~~~~~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g 268 (333)
T 3ba1_A 189 PISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEG 268 (333)
T ss_dssp CEEEECSSCCTTCCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEEECCCchhccCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcC
Confidence 99999998876555555678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEeeccCCCCCCcCCcccccc--cccccccCC
Q 043239 253 SLVELVLMCLRTSLMCQRSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 253 ~i~ga~lDv~~~e~~~~~~~l~~~~--~~tph~~~~ 286 (286)
+++||++|||+.||.+. ++|+..+ ++|||+|++
T Consensus 269 ~i~ga~lDv~~~EP~~~-~~L~~~~nviltPH~~~~ 303 (333)
T 3ba1_A 269 RLGGAGLDVFEREPEVP-EKLFGLENVVLLPHVGSG 303 (333)
T ss_dssp SSCEEEESCCTTTTCCC-GGGGGCTTEEECSSCTTC
T ss_pred CCeEEEEecCCCCCCCc-chhhcCCCEEECCcCCCC
Confidence 99999999999999766 6676655 999999985
No 20
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=7.9e-56 Score=404.83 Aligned_cols=232 Identities=22% Similarity=0.256 Sum_probs=212.7
Q ss_pred CCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcC-C-hhH---HhhcCeEEEecCCCC-CcChHHHHHHHHHHHHh
Q 043239 47 SSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHV-D-LQE---CRRRGILVTNAGNAF-SEDGADYVVGLLVDVLR 120 (286)
Q Consensus 47 ~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~i-d-~~~---~~~~gI~v~n~~~~~-~~~vAE~~l~~~L~~~R 120 (286)
+++|+++++. .+++++++ |+||||++.|+|+||| | +++ +.++||.|+|+++.. +.+||||+++++|++.|
T Consensus 40 ~~ad~~i~~~---~~~~~l~~-~~Lk~I~~~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R 115 (315)
T 3pp8_A 40 NPADYALVWQ---PPVEMLAG-RRLKAVFVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFR 115 (315)
T ss_dssp SCCSEEEESS---CCHHHHTT-CCCSEEEESSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHT
T ss_pred cCcEEEEECC---CCHHHhCC-CCceEEEECCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHh
Confidence 5899999964 57999999 9999999999999999 7 876 788999999998764 79999999999999999
Q ss_pred cchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCCccc---ccCHHHhh
Q 043239 121 RVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPF---YANVSGLA 197 (286)
Q Consensus 121 ~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~---~~~l~e~l 197 (286)
+++.+++.+++|.|... .+++++|++|||||+|.||+.+|++++++|++|++|+|+.+...+... ..++++++
T Consensus 116 ~~~~~~~~~~~g~W~~~----~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell 191 (315)
T 3pp8_A 116 RFDDYQALKNQALWKPL----PEYTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFL 191 (315)
T ss_dssp THHHHHHHHHTTCCCCC----CCCCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHH
T ss_pred CChHHHHHHHhcccCCC----CCCCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHH
Confidence 99999999999999853 467899999999999999999999999999999999998876554332 26899999
Q ss_pred cCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCCcCCcccccc
Q 043239 198 ADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMCQRSCLHWIM 277 (286)
Q Consensus 198 ~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~~~~~l~~~~ 277 (286)
++||+|++|+|++++|+++++++.|++||+|++|||+|||+++|+++|+++|++|+|.||+||||+.||++.+++|+..+
T Consensus 192 ~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~ 271 (315)
T 3pp8_A 192 NQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHP 271 (315)
T ss_dssp HTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCT
T ss_pred hhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998665
Q ss_pred --cccccccCC
Q 043239 278 --LCCLHMLLW 286 (286)
Q Consensus 278 --~~tph~~~~ 286 (286)
++|||+|++
T Consensus 272 nvilTPHia~~ 282 (315)
T 3pp8_A 272 RVAMTPHIAAV 282 (315)
T ss_dssp TEEECSSCSSC
T ss_pred CEEECCCCCcc
Confidence 999999986
No 21
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=4.9e-55 Score=400.94 Aligned_cols=271 Identities=23% Similarity=0.328 Sum_probs=234.0
Q ss_pred CCCCchhhhCCCcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCC-ccEEEEcCCCCCcCChhHHhhc
Q 043239 14 PGCFNPPLSERFTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPA-LEIVVGSTAGIDHVDLQECRRR 92 (286)
Q Consensus 14 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~-Lk~i~~~~~G~d~id~~~~~~~ 92 (286)
++...+.+.+.+++.........+ .+.+.+.++++|+++++..+++++++++++|+ ||||++.|+|+||||+++++++
T Consensus 11 ~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~Lk~I~~~~~G~d~id~~~~~~~ 89 (320)
T 1gdh_A 11 PEAAMARARESYDVIAHGDDPKIT-IDEMIETAKSVDALLITLNEKCRKEVIDRIPENIKCISTYSIGFDHIDLDACKAR 89 (320)
T ss_dssp CHHHHHHHHTTSEEEECCSTTCCC-HHHHHHHHTTCSEEEEETTSCBCHHHHHHSCTTCCEEEEESSCCTTBCHHHHHHT
T ss_pred CHHHHHHHHhcCCEEEecCCCCCC-HHHHHHHhcCCEEEEECCCCCCCHHHHHhCCccceEEEECCcccccccHHHHHhC
Confidence 334456677767754332111122 34455567899999998767899999999999 9999999999999999999999
Q ss_pred CeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCC-CCCCcccCCCCEEEEEcCChHHHHHHHHhccCC
Q 043239 93 GILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHG-AYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFG 171 (286)
Q Consensus 93 gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~-~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g 171 (286)
||.|+|+|++++.+||||++++||++.|+++.+++.+++|.|.... ....+.++.|++|||||+|.||+++|++++++|
T Consensus 90 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G 169 (320)
T 1gdh_A 90 GIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFD 169 (320)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTTT
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999999999999999996321 123577999999999999999999999999999
Q ss_pred CEEEEECC-CCCCC----CCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHH
Q 043239 172 CSIAYTSR-KKKPG----VSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELV 246 (286)
Q Consensus 172 ~~V~~~~r-~~~~~----~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~ 246 (286)
++|++||+ +.++. .+.....++++++++||+|++|+|.+++|+++++++.++.||+|++|||+|||+++|+++|.
T Consensus 170 ~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~ 249 (320)
T 1gdh_A 170 MDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVV 249 (320)
T ss_dssp CEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHH
T ss_pred CEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHH
Confidence 99999999 76542 13333348999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeeEEEeeccCCCCCCcCCcccccc--cccccccCC
Q 043239 247 HFLVRGSLVELVLMCLRTSLMCQRSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 247 ~al~~~~i~ga~lDv~~~e~~~~~~~l~~~~--~~tph~~~~ 286 (286)
++|++|+|.||+||||+.|| +.+++|+... ++|||++++
T Consensus 250 ~aL~~g~i~gA~lDv~~~eP-~~~~~L~~~~nviltPH~~~~ 290 (320)
T 1gdh_A 250 AALEAGRLAYAGFDVFAGEP-NINEGYYDLPNTFLFPHIGSA 290 (320)
T ss_dssp HHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECSSCTTC
T ss_pred HHHHhCCCcEEEEeCCCCCC-CCCChhhhCCCEEECCcCCcC
Confidence 99999999999999999999 7777787655 999999985
No 22
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=1.4e-55 Score=406.33 Aligned_cols=246 Identities=17% Similarity=0.256 Sum_probs=220.3
Q ss_pred HHHHhccCCceEEEEeCCCCCCHHHhccCCC--ccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHH
Q 043239 40 SFLSRHASSVRAILCLGPSPLTSDTLSLLPA--LEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVD 117 (286)
Q Consensus 40 ~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~--Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~ 117 (286)
+.+.+.++++|+++++...++++++++++|+ ||+|++.|+|+||||+++++++||.|+|+|++++.+||||++++||+
T Consensus 37 ~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~ 116 (331)
T 1xdw_A 37 KETAEMAAGFDAVILRGNCFANKQNLDIYKKLGVKYILTRTAGTDHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMM 116 (331)
T ss_dssp HHHHHTTTTCSEEEECTTCCBCHHHHHHHHHHTCCEEEESSSCCTTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEeCCCCCCHHHHhhCcccCceEEEEccccccccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHH
Confidence 3455567899999998778899999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-CcccccCHHHh
Q 043239 118 VLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-SYPFYANVSGL 196 (286)
Q Consensus 118 ~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-~~~~~~~l~e~ 196 (286)
+.|+++.+++.+++|.|.... ...+.++.|++|||||+|.||+.+|++++++|++|++|+|+..+.. ......+++++
T Consensus 117 ~~R~~~~~~~~~~~g~w~~~~-~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~el 195 (331)
T 1xdw_A 117 LLRHTAYTTSRTAKKNFKVDA-FMFSKEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKGIEDYCTQVSLDEV 195 (331)
T ss_dssp HHTTHHHHHHHHTTTCCCCCS-TTCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSCTTTCEECCHHHH
T ss_pred HHhCHHHHHHHHHcCCCcccc-CcCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHHHHhccccCCHHHH
Confidence 999999999999999986311 1357889999999999999999999999999999999999876532 11234589999
Q ss_pred hcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCC--CcC----
Q 043239 197 AADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLM--CQR---- 270 (286)
Q Consensus 197 l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~--~~~---- 270 (286)
+++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||+.||+ +.+
T Consensus 196 l~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~ 275 (331)
T 1xdw_A 196 LEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQ 275 (331)
T ss_dssp HHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTS
T ss_pred HhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCCCccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999985 222
Q ss_pred ---C----ccccc---ccccccccCC
Q 043239 271 ---S----CLHWI---MLCCLHMLLW 286 (286)
Q Consensus 271 ---~----~l~~~---~~~tph~~~~ 286 (286)
+ +|+.. .++|||+|++
T Consensus 276 ~~~~~~~~~L~~~~~nvilTPHia~~ 301 (331)
T 1xdw_A 276 KLENPLFEKLVDLYPRVLITPHLGSY 301 (331)
T ss_dssp CCSSHHHHHHHHTTTTEEECCSCTTC
T ss_pred ccCccchHHHHhCCCCEEEcCccccC
Confidence 2 46544 5999999986
No 23
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=3e-55 Score=400.19 Aligned_cols=244 Identities=27% Similarity=0.436 Sum_probs=223.7
Q ss_pred HHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHH
Q 043239 40 SFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDVL 119 (286)
Q Consensus 40 ~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~ 119 (286)
+.+.+.++++|++++++..++++++++++|+||||++.|+|+||||+++++++||.|+|+|++++.+||||+++++|++.
T Consensus 36 ~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~ 115 (307)
T 1wwk_A 36 DRLVELVKDVEAIIVRSKPKVTRRVIESAPKLKVIARAGVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVA 115 (307)
T ss_dssp HHHHHHSTTCSEEEESSCSCBCHHHHTTCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCEEEEEcCCCCCCHHHHhhCCCCeEEEECCccccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHH
Confidence 34455678999999876667999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC----CCcccccCHHH
Q 043239 120 RRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG----VSYPFYANVSG 195 (286)
Q Consensus 120 R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~----~~~~~~~~l~e 195 (286)
|+++.+++.+++|.|.+. ...+.++.|++|||||+|.||+.+|++++++|++|++|+|+.++. .+.. ..++++
T Consensus 116 R~~~~~~~~~~~g~w~~~--~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~e 192 (307)
T 1wwk_A 116 RKIAFADRKMREGVWAKK--EAMGIELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNEERAKEVNGK-FVDLET 192 (307)
T ss_dssp TTHHHHHHHHTTTCCCTT--TCCBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCE-ECCHHH
T ss_pred hCHHHHHHHHHcCCCCcc--CcCCcccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCChhhHhhcCcc-ccCHHH
Confidence 999999999999999742 135789999999999999999999999999999999999987642 1232 358999
Q ss_pred hhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCCcCCcccc
Q 043239 196 LAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMCQRSCLHW 275 (286)
Q Consensus 196 ~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~~~~~l~~ 275 (286)
++++||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|+++|++|+|.||+||||+.||++.+++|+.
T Consensus 193 ll~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~ 272 (307)
T 1wwk_A 193 LLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTK 272 (307)
T ss_dssp HHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGG
T ss_pred HHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888886
Q ss_pred cc--cccccccCC
Q 043239 276 IM--LCCLHMLLW 286 (286)
Q Consensus 276 ~~--~~tph~~~~ 286 (286)
.+ ++|||++++
T Consensus 273 ~~nviltPh~~~~ 285 (307)
T 1wwk_A 273 FDNVVLTPHIGAS 285 (307)
T ss_dssp CTTEEECSSCTTC
T ss_pred CCCEEECCccccC
Confidence 55 999999985
No 24
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=7.1e-56 Score=408.51 Aligned_cols=243 Identities=20% Similarity=0.294 Sum_probs=217.9
Q ss_pred HHhccCCceEEEEeCCCCCCHHHhccCCC--ccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHH
Q 043239 42 LSRHASSVRAILCLGPSPLTSDTLSLLPA--LEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDVL 119 (286)
Q Consensus 42 ~~~~~~~~d~i~~~~~~~~~~~~l~~~~~--Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~ 119 (286)
+.+.++++|++++++.+++++++++++|+ ||+|++.|+|+||||+++++++||.|+|+|++++.+||||++++||++.
T Consensus 38 ~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~ 117 (333)
T 1dxy_A 38 TVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRNVGTDNIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLL 117 (333)
T ss_dssp GGGGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEEcCCCCCCHHHHHhCcccCceEEEEcCcccCccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHh
Confidence 44556899999997777899999999998 9999999999999999999999999999999999999999999999999
Q ss_pred hcchHHHHHHHcCCCCC-CCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-CcccccCHHHhh
Q 043239 120 RRVSSIDRFVRNGLWPD-HGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-SYPFYANVSGLA 197 (286)
Q Consensus 120 R~~~~~~~~~~~~~w~~-~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-~~~~~~~l~e~l 197 (286)
|+++.+++.+++|.|.. . ...+.++.|++|||||+|.||+.+|++++++|++|++|+|+..+.. ......++++++
T Consensus 118 R~~~~~~~~~~~g~w~~~~--~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell 195 (333)
T 1dxy_A 118 RNMGKVQAQLQAGDYEKAG--TFIGKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLF 195 (333)
T ss_dssp TTHHHHHHHHHTTCHHHHT--CCCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHH
T ss_pred hhHHHHHHHHHcCCccccc--CCCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchhhHhccccCCHHHHH
Confidence 99999999999999842 1 1257789999999999999999999999999999999999876532 112345899999
Q ss_pred cCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCC--Cc------
Q 043239 198 ADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLM--CQ------ 269 (286)
Q Consensus 198 ~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~--~~------ 269 (286)
++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||+.||. +.
T Consensus 196 ~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~ 275 (333)
T 1dxy_A 196 KQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGS 275 (333)
T ss_dssp HHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSS
T ss_pred hcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999983 21
Q ss_pred -C----Ccccc--cccccccccCC
Q 043239 270 -R----SCLHW--IMLCCLHMLLW 286 (286)
Q Consensus 270 -~----~~l~~--~~~~tph~~~~ 286 (286)
+ ++|+. +.++|||+|++
T Consensus 276 ~~~~~~~pL~~~~nvi~TPHia~~ 299 (333)
T 1dxy_A 276 FKDPLWDELLGMPNVVLSPHIAYY 299 (333)
T ss_dssp CCCHHHHHHHTCTTEEECSSCTTC
T ss_pred cCccchhHHhcCCCEEECCccccC
Confidence 1 34554 44999999986
No 25
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=3.4e-54 Score=398.81 Aligned_cols=267 Identities=25% Similarity=0.371 Sum_probs=229.0
Q ss_pred CchhhhCCCcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcCeEE
Q 043239 17 FNPPLSERFTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRGILV 96 (286)
Q Consensus 17 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v 96 (286)
..+.+...+++..+. . .+.+++..+...++|+++++...++++++++++|+||+|++.++|+|+||+++++++||.|
T Consensus 35 ~~~~l~~~~~~~~~~-~--~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~V 111 (347)
T 1mx3_A 35 EMPILKDVATVAFCD-A--QSTQEIHEKVLNEAVGALMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAV 111 (347)
T ss_dssp THHHHTTTCEEEECC-C--SSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTCSSCCEEEESSSCCTTBCHHHHHHTTCEE
T ss_pred hHHHhhccceEEecC-C--CCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhCCCCCEEEEcccccCcccHHHHHhCCceE
Confidence 356677767666554 2 2233333333357788888777789999999999999999999999999999999999999
Q ss_pred EecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCC----CCC-cccCCCCEEEEEcCChHHHHHHHHhccCC
Q 043239 97 TNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGA----YPL-GSTLGGKRVGIVGLGSIGSEVAKRLVPFG 171 (286)
Q Consensus 97 ~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~----~~~-~~~l~g~~vgIiG~G~iG~~~A~~l~~~g 171 (286)
+|+|++++.+||||++++||++.|++..+++.+++|.|..... ... +.++.|++|||||+|.||+.+|++++++|
T Consensus 112 ~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G 191 (347)
T 1mx3_A 112 CNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFG 191 (347)
T ss_dssp ECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHHHHTTT
T ss_pred EECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeECHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999999999999963210 011 26899999999999999999999999999
Q ss_pred CEEEEECCCCCCCC----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 043239 172 CSIAYTSRKKKPGV----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVH 247 (286)
Q Consensus 172 ~~V~~~~r~~~~~~----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~ 247 (286)
++|++||++..+.. +.....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|++
T Consensus 192 ~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~ 271 (347)
T 1mx3_A 192 FNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQ 271 (347)
T ss_dssp CEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHH
T ss_pred CEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHH
Confidence 99999998765421 23334589999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeeEEEeeccCCCCCC-cCCcccc--cccccccccCC
Q 043239 248 FLVRGSLVELVLMCLRTSLMC-QRSCLHW--IMLCCLHMLLW 286 (286)
Q Consensus 248 al~~~~i~ga~lDv~~~e~~~-~~~~l~~--~~~~tph~~~~ 286 (286)
+|++|+|.||++|||+.||++ ..++|+. +.++|||+|++
T Consensus 272 aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~ 313 (347)
T 1mx3_A 272 ALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWY 313 (347)
T ss_dssp HHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTC
T ss_pred HHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHH
Confidence 999999999999999999986 3566664 44999999985
No 26
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=2.1e-54 Score=395.70 Aligned_cols=241 Identities=19% Similarity=0.301 Sum_probs=220.2
Q ss_pred HHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHH
Q 043239 40 SFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDVL 119 (286)
Q Consensus 40 ~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~ 119 (286)
+.+.+.++++|++++++..++++++++++|+||||++.|+|+||||+++++++||.|+|+|++++.+||||++++||++.
T Consensus 38 ~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~ 117 (313)
T 2ekl_A 38 EELLNIIGNYDIIVVRSRTKVTKDVIEKGKKLKIIARAGIGLDNIDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAA 117 (313)
T ss_dssp HHHHHHGGGCSEEEECSSSCBCHHHHHHCTTCCEEEECSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEEcCCCCCccCHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHH
Confidence 34455668999999876678999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC----CCcccccCHHH
Q 043239 120 RRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG----VSYPFYANVSG 195 (286)
Q Consensus 120 R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~----~~~~~~~~l~e 195 (286)
|+++.+++.+++|.|.. ..+.++.|++|||||+|.||+.+|++++++|++|++|+|+.++. .+.. ..++++
T Consensus 118 R~~~~~~~~~~~g~w~~----~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~e 192 (313)
T 2ekl_A 118 RKMYTSMALAKSGIFKK----IEGLELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREKAEKINAK-AVSLEE 192 (313)
T ss_dssp HTHHHHHHHHHTTCCCC----CCCCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCE-ECCHHH
T ss_pred hCHHHHHHHHHcCCCCC----CCCCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhHHHhcCce-ecCHHH
Confidence 99999999999999962 35778999999999999999999999999999999999987642 1333 358999
Q ss_pred hhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCCcCC---c
Q 043239 196 LAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMCQRS---C 272 (286)
Q Consensus 196 ~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~~~~---~ 272 (286)
++++||+|++|+|.+++|+++++++.++.||+|+++||+|||+++|+++|.++|++|+|.||+||||+.||++ ++ +
T Consensus 193 ll~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~-~~~~~~ 271 (313)
T 2ekl_A 193 LLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPK-EEWELE 271 (313)
T ss_dssp HHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCC-SHHHHH
T ss_pred HHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCC-Ccccch
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988 44 6
Q ss_pred ccccc--cccccccCC
Q 043239 273 LHWIM--LCCLHMLLW 286 (286)
Q Consensus 273 l~~~~--~~tph~~~~ 286 (286)
|+..+ ++|||+|++
T Consensus 272 L~~~~nviltPH~~~~ 287 (313)
T 2ekl_A 272 LLKHERVIVTTHIGAQ 287 (313)
T ss_dssp HHHSTTEEECCSCTTC
T ss_pred HhhCCCEEECCccCcC
Confidence 66544 999999985
No 27
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=4.9e-54 Score=400.11 Aligned_cols=242 Identities=21% Similarity=0.264 Sum_probs=209.4
Q ss_pred CchhhhCCCcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcCeEE
Q 043239 17 FNPPLSERFTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRGILV 96 (286)
Q Consensus 17 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v 96 (286)
..+.+.+..++..+. ..+. .. +.++++|++++++.+++++++++ .++||||++.++|+||||+++++++||.|
T Consensus 15 ~~~~~~~~~~v~~~~-~~~~-~~----~~l~~ad~li~~~~~~v~~~ll~-~~~Lk~I~~~~~G~D~iD~~~~~~~gI~v 87 (381)
T 3oet_A 15 ARELFSRLGEVKAVP-GRPI-PV----EELNHADALMVRSVTKVNESLLS-GTPINFVGTATAGTDHVDEAWLKQAGIGF 87 (381)
T ss_dssp HHHHHTTSSEEEEEC-C----CH----HHHTTCSEEEECTTSCBSHHHHT-TSCCCEEEESSSCCTTBCHHHHHHTTCEE
T ss_pred HHHHHhhCCcEEEeC-CCCC-CH----HHHCCCEEEEECCCCCCCHHHHc-CCCCEEEEEccccccccCHHHHHhCCEEE
Confidence 344555555555443 2111 12 23579999999887889999999 57799999999999999999999999999
Q ss_pred EecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEE
Q 043239 97 TNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAY 176 (286)
Q Consensus 97 ~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~ 176 (286)
+|+|++++.+||||+++++|++.|+. +.+++|++|||||+|.||+.+|++++++|++|++
T Consensus 88 ~n~pg~~~~~VAE~~l~~lL~l~r~~--------------------g~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~ 147 (381)
T 3oet_A 88 SAAPGCNAIAVVEYVFSALLMLAERD--------------------GFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLL 147 (381)
T ss_dssp ECCTTTTHHHHHHHHHHHHHHHHHHT--------------------TCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEE
T ss_pred EECCCcCcchhHHHHHHHHHHHHHhc--------------------CCccCCCEEEEEeECHHHHHHHHHHHHCCCEEEE
Confidence 99999999999999999999999872 3468999999999999999999999999999999
Q ss_pred ECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChh----hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 177 TSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEE----THHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 177 ~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~----t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
||++.........+.++++++++||+|++|+|++++ |+++++++.|+.||+|++|||+|||+++|+++|+++|++|
T Consensus 148 ~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g 227 (381)
T 3oet_A 148 CDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAG 227 (381)
T ss_dssp ECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred ECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 998654332333467999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred CeeEEEeeccCCCCCCcCCcccccc-cccccccCC
Q 043239 253 SLVELVLMCLRTSLMCQRSCLHWIM-LCCLHMLLW 286 (286)
Q Consensus 253 ~i~ga~lDv~~~e~~~~~~~l~~~~-~~tph~~~~ 286 (286)
++.||+||||+.||++.+. |+... ++|||||||
T Consensus 228 ~i~gA~LDV~e~EP~~~~~-L~~~~~i~TPHiag~ 261 (381)
T 3oet_A 228 QPLSVVLDVWEGEPDLNVA-LLEAVDIGTSHIAGY 261 (381)
T ss_dssp CCEEEEESCCTTTTSCCHH-HHHHSSEECSSCTTC
T ss_pred CCeEEEeeccccCCCCcch-hhhCCEEECCccCcC
Confidence 9999999999999987665 44444 899999996
No 28
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=3.1e-53 Score=386.13 Aligned_cols=234 Identities=18% Similarity=0.304 Sum_probs=213.5
Q ss_pred ccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchH
Q 043239 45 HASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSS 124 (286)
Q Consensus 45 ~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~ 124 (286)
.++++|+++++. .+.++++++|+||||++.|+|+||||++++ ++||.|+|+|++++.+||||++++||++.|+++.
T Consensus 28 ~~~~~d~~i~~~---~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~ 103 (303)
T 1qp8_A 28 DLGNVEAALVSR---ITAEELAKMPRLKFIQVVTAGLDHLPWESI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQ 103 (303)
T ss_dssp CCTTBCCCCBSC---CCHHHHHHCTTCCCEEBSSSCCTTSCCTTS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHH
T ss_pred hhCCCEEEEECC---CCHHHHhhCCCCcEEEECCcCcccccHHHH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHH
Confidence 457899998854 467999999999999999999999999885 7999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEE
Q 043239 125 IDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLI 204 (286)
Q Consensus 125 ~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~ 204 (286)
+++.+++|.|... ....++.|++|||||+|.||+.+|++++++|++|++|+|+.+ ..+.....++++++++||+|+
T Consensus 104 ~~~~~~~g~w~~~---~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~-~~~~~~~~~l~ell~~aDvV~ 179 (303)
T 1qp8_A 104 YGEKMKRGDYGRD---VEIPLIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-EGPWRFTNSLEEALREARAAV 179 (303)
T ss_dssp HHHHHHTTCCCCC---SCCCCCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC-CSSSCCBSCSHHHHTTCSEEE
T ss_pred HHHHHHcCCCCCC---CCCCCCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-ccCcccCCCHHHHHhhCCEEE
Confidence 9999999999743 124589999999999999999999999999999999999876 223344568999999999999
Q ss_pred EeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeecc-CCCCCCcCCcccccc--cccc
Q 043239 205 VCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCL-RTSLMCQRSCLHWIM--LCCL 281 (286)
Q Consensus 205 ~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~-~~e~~~~~~~l~~~~--~~tp 281 (286)
+|+|++++|+++++++.++.||+|++|||+|||+++|+++|+++|++|+|.||++||| +.||++.+++|+..+ ++||
T Consensus 180 l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltP 259 (303)
T 1qp8_A 180 CALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATP 259 (303)
T ss_dssp ECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECC
T ss_pred EeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999 889988888887655 9999
Q ss_pred cccCC
Q 043239 282 HMLLW 286 (286)
Q Consensus 282 h~~~~ 286 (286)
|+|++
T Consensus 260 H~~~~ 264 (303)
T 1qp8_A 260 WVAGG 264 (303)
T ss_dssp SCSSS
T ss_pred CcCCC
Confidence 99984
No 29
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=6.5e-53 Score=381.11 Aligned_cols=227 Identities=21% Similarity=0.284 Sum_probs=204.4
Q ss_pred hccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcch
Q 043239 44 RHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVS 123 (286)
Q Consensus 44 ~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~ 123 (286)
+.++++|+++++ ...+ ++|+||||++.|+|+|+||++++++++|.++|. +.++.+||||++++||++.|++.
T Consensus 30 ~~~~~ad~li~~-~~~~------~~~~Lk~I~~~~~G~d~id~~~~~~~~~~~~~~-~~~~~~vAE~~~~~~L~~~R~~~ 101 (290)
T 3gvx_A 30 PDYYDAEAQVIK-DRYV------LGKRTKMIQAISAGVDHIDVNGIPENVVLCSNA-GAYSISVAEHAFALLLAHAKNIL 101 (290)
T ss_dssp TSCCCCSEEEES-SCCC------CCSSCCEEEECSSCCTTSCGGGSCTTSEEECCH-HHHHHHHHHHHHHHHHHHHTTHH
T ss_pred cchhhhhhhhhh-hhhh------hhhhhHHHHHHhcCCceeecCCCccceEEeecC-CcceeeHHHHHHHHHHHHHHhhh
Confidence 345799999983 3332 789999999999999999999999877766664 77899999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEE
Q 043239 124 SIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVL 203 (286)
Q Consensus 124 ~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV 203 (286)
.+++.+++|.|.+. ..+++.|++|||||+|.||+++|++++++|++|++|+|+.++........++++++++||+|
T Consensus 102 ~~~~~~~~g~w~~~----~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~~aDiV 177 (290)
T 3gvx_A 102 ENNELMKAGIFRQS----PTTLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNVDVISESPADLFRQSDFV 177 (290)
T ss_dssp HHHHHHHTTCCCCC----CCCCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTCSEECSSHHHHHHHCSEE
T ss_pred hhhhHhhhcccccC----CceeeecchheeeccCchhHHHHHHHHhhCcEEEEEeccccccccccccCChHHHhhccCeE
Confidence 99999999999854 23689999999999999999999999999999999999887665555556999999999999
Q ss_pred EEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCCcCCcccccc--cccc
Q 043239 204 IVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMCQRSCLHWIM--LCCL 281 (286)
Q Consensus 204 ~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~~~~~l~~~~--~~tp 281 (286)
++|+|++++|+++++++.++.||+|++|||+|||+++|+++|+++|++|++.||+||||+.||+ ++|+..+ ++||
T Consensus 178 ~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~---~pL~~~~nvilTP 254 (290)
T 3gvx_A 178 LIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPE---ITETNLRNAILSP 254 (290)
T ss_dssp EECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTS---CCSCCCSSEEECC
T ss_pred EEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcc---cchhhhhhhhcCc
Confidence 9999999999999999999999999999999999999999999999999999999999999998 5555544 9999
Q ss_pred cccC
Q 043239 282 HMLL 285 (286)
Q Consensus 282 h~~~ 285 (286)
|+||
T Consensus 255 Hiag 258 (290)
T 3gvx_A 255 HVAG 258 (290)
T ss_dssp SCSS
T ss_pred cccC
Confidence 9993
No 30
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=5.3e-52 Score=382.43 Aligned_cols=270 Identities=25% Similarity=0.378 Sum_probs=232.8
Q ss_pred CCCchhhhCC--CcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccC-CCccEEEEcCCCCCcCChhHHhh
Q 043239 15 GCFNPPLSER--FTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLL-PALEIVVGSTAGIDHVDLQECRR 91 (286)
Q Consensus 15 ~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~d~id~~~~~~ 91 (286)
+...+.+.+. +++..+......+ .+.+.+.++++|++++++..++++++++++ |+||||++.++|+||||++++++
T Consensus 19 ~~~~~~l~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~Lk~I~~~~~G~d~id~~~~~~ 97 (330)
T 2gcg_A 19 AEGRVALARAADCEVEQWDSDEPIP-AKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKK 97 (330)
T ss_dssp HHHHHHHHHCTTEEEEECCSSSCCC-HHHHHHHHTTCSEEEECTTSCBCHHHHHHHCTTCCEEEESSSCCTTBCHHHHHH
T ss_pred HHHHHHHHhcCCceEEEecCCCCCC-HHHHHHHhcCCeEEEECCCCCCCHHHHHhcCCCceEEEECCcccccccHHHHHh
Confidence 3345566665 5654433111222 344455668999999877778999999999 99999999999999999999999
Q ss_pred cCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCC-CCCCcccCCCCEEEEEcCChHHHHHHHHhccC
Q 043239 92 RGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHG-AYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPF 170 (286)
Q Consensus 92 ~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~-~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~ 170 (286)
+||.|+|+|++++.+||||+++++|++.|++..+++.+++|.|.... ....+.++.|++|||||+|.||+.+|++++++
T Consensus 98 ~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~ 177 (330)
T 2gcg_A 98 RGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPF 177 (330)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGGG
T ss_pred CCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999997421 12347899999999999999999999999999
Q ss_pred CCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHH
Q 043239 171 GCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKEL 245 (286)
Q Consensus 171 g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al 245 (286)
|++|++|+++..... +.. ..++++++++||+|++|+|.+++++++++++.++.||+|++|||+|||+++|+++|
T Consensus 178 G~~V~~~d~~~~~~~~~~~~g~~-~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL 256 (330)
T 2gcg_A 178 GVQRFLYTGRQPRPEEAAEFQAE-FVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDL 256 (330)
T ss_dssp TCCEEEEESSSCCHHHHHTTTCE-ECCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHH
T ss_pred CCEEEEECCCCcchhHHHhcCce-eCCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHH
Confidence 999999998765321 222 23899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeeEEEeeccCCCCCCcCCcccccc--cccccccCC
Q 043239 246 VHFLVRGSLVELVLMCLRTSLMCQRSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 246 ~~al~~~~i~ga~lDv~~~e~~~~~~~l~~~~--~~tph~~~~ 286 (286)
.++|+++++.|+++|||++||++.+++|+... ++|||+|++
T Consensus 257 ~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~ 299 (330)
T 2gcg_A 257 YQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSA 299 (330)
T ss_dssp HHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTC
T ss_pred HHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCC
Confidence 99999999999999999999998888887655 999999985
No 31
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=3.4e-52 Score=384.28 Aligned_cols=269 Identities=28% Similarity=0.418 Sum_probs=231.9
Q ss_pred CCCchhhhCCCcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcCe
Q 043239 15 GCFNPPLSERFTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRGI 94 (286)
Q Consensus 15 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI 94 (286)
+...+.+.+.+++..+....+. ..+.+.+.++++|+++++...++++++++++|+||||++.|+|+||||+++++++||
T Consensus 13 ~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~gi 91 (334)
T 2dbq_A 13 EVGIKMLEDEFEVEVWGDEKEI-PREILLKKVKEVDALVTMLSERIDKEVFENAPKLRIVANYAVGYDNIDIEEATKRGI 91 (334)
T ss_dssp HHHHHHHHTTSEEEECCCSSCC-CHHHHHHHTTSCSEEEECTTSCBCHHHHHTCTTCCEEEESSSCCTTBCHHHHHHTTC
T ss_pred HHHHHHHHhcCCEEEecCCCCC-CHHHHHHHhcCcEEEEEcCCCCCCHHHHhhCCCceEEEECCcccccccHHHHHhCCC
Confidence 3345667777776544311112 234455567899999997777899999999999999999999999999999999999
Q ss_pred EEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCC----CCC-CCCCcccCCCCEEEEEcCChHHHHHHHHhcc
Q 043239 95 LVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWP----DHG-AYPLGSTLGGKRVGIVGLGSIGSEVAKRLVP 169 (286)
Q Consensus 95 ~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~----~~~-~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~ 169 (286)
.|+|+|++++.+||||++++||++.|+++.+++.+++|.|. ... ....+.++.|++|||||+|.||+.+|+++++
T Consensus 92 ~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~ 171 (334)
T 2dbq_A 92 YVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKG 171 (334)
T ss_dssp EEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHHHHH
T ss_pred EEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999995 211 1124678999999999999999999999999
Q ss_pred CCCEEEEECCCCCCCC----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHH
Q 043239 170 FGCSIAYTSRKKKPGV----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKEL 245 (286)
Q Consensus 170 ~g~~V~~~~r~~~~~~----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al 245 (286)
+|++|++|+|+.+... +. ...++++++++||+|++|+|.+++++++++++.++.||+|++|||+|||.++|+++|
T Consensus 172 ~G~~V~~~d~~~~~~~~~~~g~-~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL 250 (334)
T 2dbq_A 172 FNMRILYYSRTRKEEVERELNA-EFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNAL 250 (334)
T ss_dssp TTCEEEEECSSCCHHHHHHHCC-EECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHH
T ss_pred CCCEEEEECCCcchhhHhhcCc-ccCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHH
Confidence 9999999999876511 22 245899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeeEEEeeccCCCCCCcCCcccccc--cccccccCC
Q 043239 246 VHFLVRGSLVELVLMCLRTSLMCQRSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 246 ~~al~~~~i~ga~lDv~~~e~~~~~~~l~~~~--~~tph~~~~ 286 (286)
.++|++|+|.||++|||+.|| +.+++|+..+ ++|||+|++
T Consensus 251 ~~aL~~~~i~ga~lDv~~~EP-~~~~~L~~~~~vi~tPh~~~~ 292 (334)
T 2dbq_A 251 VKALKEGWIAGAGLDVFEEEP-YYNEELFKLDNVVLTPHIGSA 292 (334)
T ss_dssp HHHHHHTSSSEEEESCCSSSS-CCCHHHHHCTTEEECSSCTTC
T ss_pred HHHHHhCCeeEEEecCCCCCC-CCCchhhcCCCEEECCccCCC
Confidence 999999999999999999998 6666676655 999999985
No 32
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=4e-52 Score=383.60 Aligned_cols=267 Identities=29% Similarity=0.480 Sum_probs=230.4
Q ss_pred CCCCCchhhhCCCcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhc
Q 043239 13 APGCFNPPLSERFTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRR 92 (286)
Q Consensus 13 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~ 92 (286)
+++...+.+.+.+++..+. .. ..+.+.+.++++|++++++..++++++++++|+||+|++.++|+|+||+++++++
T Consensus 11 ~~~~~~~~l~~~~~~~~~~---~~-~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id~~~~~~~ 86 (333)
T 2d0i_A 11 MKREALEELKKYADVEIIL---YP-SGEELKGVIGRFDGIIVSPTTKITREVLENAERLKVISCHSAGYDNIDLEEATKR 86 (333)
T ss_dssp CCHHHHHHHHTTSEEEECC---SC-CHHHHHHHGGGCSEEEECTTSCBCHHHHTTCTTCCEEEESSSCCTTBCHHHHHHT
T ss_pred CCHHHHHHHHhcCCEEEeC---CC-CHHHHHHHhcCCEEEEECCCCCCCHHHHhhCCCceEEEECCcccccccHHHHHhC
Confidence 3444566777777654432 12 2334455668999999877778999999999999999999999999999999999
Q ss_pred CeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCc----ccCCCCEEEEEcCChHHHHHHHHhc
Q 043239 93 GILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLG----STLGGKRVGIVGLGSIGSEVAKRLV 168 (286)
Q Consensus 93 gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~----~~l~g~~vgIiG~G~iG~~~A~~l~ 168 (286)
||.|+|+|++++.+||||++++||++.|++..+++.+++|.|........+ .++.|++|||||+|.||+.+|++++
T Consensus 87 gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~ 166 (333)
T 2d0i_A 87 GIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIGKAIARRLI 166 (333)
T ss_dssp TCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECCSHHHHHHHHHHG
T ss_pred CcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCcccccCCcccCCCCcCEEEEEccCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999631001134 7899999999999999999999999
Q ss_pred cCCCEEEEECCCCCCCC----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHH
Q 043239 169 PFGCSIAYTSRKKKPGV----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKE 244 (286)
Q Consensus 169 ~~g~~V~~~~r~~~~~~----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~a 244 (286)
++|++|++|+|+.+... +.. ..++++++++||+|++|+|.+++++++++++.++.||+| +|||+|||.++|+++
T Consensus 167 ~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~~a 244 (333)
T 2d0i_A 167 PFGVKLYYWSRHRKVNVEKELKAR-YMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDEKA 244 (333)
T ss_dssp GGTCEEEEECSSCCHHHHHHHTEE-ECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCHHH
T ss_pred HCCCEEEEECCCcchhhhhhcCce-ecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCHHH
Confidence 99999999999876421 222 348999999999999999999999999999899999999 999999999999999
Q ss_pred HHHHHHhCCeeEEEeeccCCCCCCcCCccccc---ccccccccCC
Q 043239 245 LVHFLVRGSLVELVLMCLRTSLMCQRSCLHWI---MLCCLHMLLW 286 (286)
Q Consensus 245 l~~al~~~~i~ga~lDv~~~e~~~~~~~l~~~---~~~tph~~~~ 286 (286)
|+++|++++|.||++|||+.||++ +++|+.. .++|||+|++
T Consensus 245 L~~aL~~~~i~gaglDv~~~EP~~-~~~L~~~~~nviltPh~~~~ 288 (333)
T 2d0i_A 245 VTEAIKQGKLKGYATDVFEKEPVR-EHELFKYEWETVLTPHYAGL 288 (333)
T ss_dssp HHHHHHTTCBCEEEESCCSSSSCS-CCGGGGCTTTEEECCSCTTC
T ss_pred HHHHHHcCCceEEEecCCCCCCCC-CchHHcCCCCEEEcCccCCC
Confidence 999999999999999999999987 6777654 4999999985
No 33
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=3.7e-51 Score=379.21 Aligned_cols=265 Identities=23% Similarity=0.314 Sum_probs=225.4
Q ss_pred CchhhhCCCcEEecCCCCCCCchHHHHhccC-----CceEEEEe------CCCCCCHHHhccCC-CccEEEEcCCCCCcC
Q 043239 17 FNPPLSERFTLLDPLLHSADSTHSFLSRHAS-----SVRAILCL------GPSPLTSDTLSLLP-ALEIVVGSTAGIDHV 84 (286)
Q Consensus 17 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~i~~~------~~~~~~~~~l~~~~-~Lk~i~~~~~G~d~i 84 (286)
..+.|.+.+++..+. . .+.+++.+ .++ ++|++++. ...++++++++++| +||+|++.++|+|||
T Consensus 19 ~~~~l~~~~~~~~~~-~--~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Lk~I~~~~~G~d~i 94 (348)
T 2w2k_A 19 LWSDFQQKFEVIPAN-L--TTHDGFKQ-ALREKRYGDFEAIIKLAVENGTESYPWNADLISHLPSSLKVFAAAGAGFDWL 94 (348)
T ss_dssp HHHHHHHHSEEEECC-C--CCHHHHHH-HHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHTTSCTTCCEEEESSSCCTTB
T ss_pred HHHHHHhcceEEecC-C--CCHHHHHH-HhhhcccCCeEEEEEcccccccccCCCCHHHHHhcccCceEEEECCcccccc
Confidence 355666677775543 2 22344443 334 88998864 23579999999998 699999999999999
Q ss_pred ChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCC---CCCCC--CCCCcccCCCCEEEEEcCChH
Q 043239 85 DLQECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGL---WPDHG--AYPLGSTLGGKRVGIVGLGSI 159 (286)
Q Consensus 85 d~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~---w~~~~--~~~~~~~l~g~~vgIiG~G~i 159 (286)
|+++|+++||.|+|+|++++.+||||++++||++.|+++.+++.+++|. |.... ....+.++.|++|||||+|.|
T Consensus 95 d~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~l~g~~vgIIG~G~I 174 (348)
T 2w2k_A 95 DLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIGKSAHNPRGHVLGAVGLGAI 174 (348)
T ss_dssp CHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTCCCSTTCEEEEECCSHH
T ss_pred CHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccccccccccCcCCCCCEEEEEEECHH
Confidence 9999999999999999999999999999999999999999999999999 93210 012467899999999999999
Q ss_pred HHHHHHHhc-cCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEE
Q 043239 160 GSEVAKRLV-PFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIIN 233 (286)
Q Consensus 160 G~~~A~~l~-~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn 233 (286)
|+.+|++++ ++|++|++|||+..... +.....++++++++||+|++|+|.+++++++++++.++.||+|++|||
T Consensus 175 G~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin 254 (348)
T 2w2k_A 175 QKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVN 254 (348)
T ss_dssp HHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEE
T ss_pred HHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEE
Confidence 999999999 99999999999875421 333335899999999999999999999999999999999999999999
Q ss_pred cCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCCcCCcccccc--cccccccCC
Q 043239 234 VGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMCQRSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 234 ~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~~~~~l~~~~--~~tph~~~~ 286 (286)
+|||+++|+++|.++|++|+|.||++|||+.|| ..+.+|+..+ ++|||+|++
T Consensus 255 ~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP-~~~~~L~~~~nviltPH~~~~ 308 (348)
T 2w2k_A 255 TARGPVISQDALIAALKSGKLLSAGLDVHEFEP-QVSKELIEMKHVTLTTHIGGV 308 (348)
T ss_dssp CSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTT-SCCHHHHTSSSEEECCSCTTC
T ss_pred CCCCchhCHHHHHHHHHhCCceEEEeccCCCCC-CCCchhhcCCCEEEcCcCCCC
Confidence 999999999999999999999999999999998 4455565544 999999985
No 34
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=1.6e-50 Score=393.79 Aligned_cols=265 Identities=25% Similarity=0.346 Sum_probs=231.0
Q ss_pred CCCCchhhhCCCcEEecCCCCCCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcC
Q 043239 14 PGCFNPPLSERFTLLDPLLHSADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRG 93 (286)
Q Consensus 14 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~g 93 (286)
++...+.|.+.+++.... ..+ .+.+.+.+.++|++++++.+++++++++++|+||||++.|+|+||||+++|+++|
T Consensus 14 ~~~~~~~l~~~~~v~~~~---~~~-~~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~g 89 (529)
T 1ygy_A 14 APSTVAALGDQVEVRWVD---GPD-RDKLLAAVPEADALLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVDVDAATARG 89 (529)
T ss_dssp CGGGGTTSCSSSEEEECC---TTS-HHHHHHHGGGCSEEEECSSSCBCHHHHHTCTTCCEEEESSSCCTTBCHHHHHHTT
T ss_pred CHHHHHHHhcCceEEEcC---CCC-HHHHHHHhcCCEEEEEcCCCCCCHHHHhhCCCCcEEEECCcCcCccCHhHHHhCC
Confidence 344455566666654433 122 3344556789999999877889999999999999999999999999999999999
Q ss_pred eEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCE
Q 043239 94 ILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCS 173 (286)
Q Consensus 94 I~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~ 173 (286)
|.|+|+|++++.+||||++++||++.|+++++++.+++|.|.+. ...+.+++|++|||||+|.||+++|++|+++|++
T Consensus 90 i~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~--~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~ 167 (529)
T 1ygy_A 90 VLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRS--SFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAY 167 (529)
T ss_dssp CEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGG--GCCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCE
T ss_pred eEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCccc--CcCccccCCCEEEEEeeCHHHHHHHHHHHhCCCE
Confidence 99999999999999999999999999999999999999999753 2357899999999999999999999999999999
Q ss_pred EEEECCCCCCCC----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 043239 174 IAYTSRKKKPGV----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFL 249 (286)
Q Consensus 174 V~~~~r~~~~~~----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al 249 (286)
|++||++..... +.. ..++++++++||+|++|+|.++++.++++++.++.||+|+++||+|||+++|+.+|+++|
T Consensus 168 V~~~d~~~~~~~a~~~g~~-~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al 246 (529)
T 1ygy_A 168 VVAYDPYVSPARAAQLGIE-LLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAI 246 (529)
T ss_dssp EEEECTTSCHHHHHHHTCE-ECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHH
T ss_pred EEEECCCCChhHHHhcCcE-EcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHH
Confidence 999999764211 333 248999999999999999999999999999899999999999999999999999999999
Q ss_pred HhCCeeEEEeeccCCCCCCcCCcccccc--cccccccCC
Q 043239 250 VRGSLVELVLMCLRTSLMCQRSCLHWIM--LCCLHMLLW 286 (286)
Q Consensus 250 ~~~~i~ga~lDv~~~e~~~~~~~l~~~~--~~tph~~~~ 286 (286)
++|++.||++|||+.||++ +++|+... ++|||++++
T Consensus 247 ~~g~i~ga~lDv~~~eP~~-~~~L~~~~~vilTPh~~~~ 284 (529)
T 1ygy_A 247 TGGHVRAAGLDVFATEPCT-DSPLFELAQVVVTPHLGAS 284 (529)
T ss_dssp HTSSEEEEEESSCSSSSCS-CCGGGGCTTEEECSSCSSC
T ss_pred HcCCccEEEEeeccCCCCC-CchHHhCCCEEEccccCCC
Confidence 9999999999999999974 66677655 999999964
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.1e-51 Score=385.14 Aligned_cols=220 Identities=21% Similarity=0.347 Sum_probs=200.3
Q ss_pred cCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHH
Q 043239 46 ASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSI 125 (286)
Q Consensus 46 ~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~ 125 (286)
++++|++++++.+++++++++ +|+||||++.++|+||||+++++++||.|+|+|++++.+||||+++++|++.|+.
T Consensus 35 l~~ad~li~~~~~~~~~~~l~-~~~Lk~I~~~~~G~D~iD~~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~--- 110 (380)
T 2o4c_A 35 LAEVDVLLVRSVTEVSRAALA-GSPVRFVGTCTIGTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVR--- 110 (380)
T ss_dssp TTTCSEEEECTTSCBCHHHHT-TSCCCEEEECSSCSTTBCHHHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHH---
T ss_pred HCCcEEEEEcCCCCCCHHHhc-CCCceEEEEcCcccchhhHHHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhh---
Confidence 479999999877889999999 8999999999999999999999999999999999999999999999999999872
Q ss_pred HHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEE
Q 043239 126 DRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIV 205 (286)
Q Consensus 126 ~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~ 205 (286)
+.++.|++|||||+|+||+.+|++|+++|++|++||++...........++++++++||+|++
T Consensus 111 -----------------~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~g~~~~~l~ell~~aDvV~l 173 (380)
T 2o4c_A 111 -----------------GADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISL 173 (380)
T ss_dssp -----------------TCCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHHSTTSCCCCHHHHHHHCSEEEE
T ss_pred -----------------hcccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhhccCcccCCHHHHHHhCCEEEE
Confidence 236899999999999999999999999999999999865432111235789999999999999
Q ss_pred eccCChh----hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCCcCCcccccccccc
Q 043239 206 CCALTEE----THHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMCQRSCLHWIMLCCL 281 (286)
Q Consensus 206 ~lp~~~~----t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~~~~~l~~~~~~tp 281 (286)
|+|++++ |+++++++.|+.||+|++|||+|||+++|+++|+++|++|+|.+|+||||+.||.+.+..+..+.++||
T Consensus 174 ~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~~nvi~TP 253 (380)
T 2o4c_A 174 HTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQADPELAARCLIATP 253 (380)
T ss_dssp CCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHTTCSEECS
T ss_pred eccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCCchhhccCCEEEcc
Confidence 9999999 999999999999999999999999999999999999999999999999999999766655554559999
Q ss_pred cccCC
Q 043239 282 HMLLW 286 (286)
Q Consensus 282 h~~~~ 286 (286)
|||||
T Consensus 254 Hiag~ 258 (380)
T 2o4c_A 254 HIAGY 258 (380)
T ss_dssp SCTTC
T ss_pred ccCcC
Confidence 99986
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=99.96 E-value=5.1e-31 Score=251.61 Aligned_cols=192 Identities=15% Similarity=0.161 Sum_probs=164.8
Q ss_pred CCCccEEE-EcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccC
Q 043239 68 LPALEIVV-GSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTL 146 (286)
Q Consensus 68 ~~~Lk~i~-~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l 146 (286)
+|+++.|+ .+++|+|++ ++++++||.++|+++++. +||| +++|++..+...++.| |.+ ..+.++
T Consensus 191 ~~~l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r----~~~~~l 255 (479)
T 1v8b_A 191 AKKIIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMR----ATDFLI 255 (479)
T ss_dssp HTTCCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHH----HHCCCC
T ss_pred hcCeEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhh----cccccc
Confidence 47899998 889999998 889999999999999999 9999 3467887777777777 853 245679
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC-----CCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG-----VSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
.|++|||||+|.||+.+|++++++|++|++++++.... .++ ...++++++++||+|++|+ .+.++|+++.
T Consensus 256 ~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~-~~~~l~ell~~aDiVi~~~----~t~~lI~~~~ 330 (479)
T 1v8b_A 256 SGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGF-NVVTLDEIVDKGDFFITCT----GNVDVIKLEH 330 (479)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTC-EECCHHHHTTTCSEEEECC----SSSSSBCHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCC-EecCHHHHHhcCCEEEECC----ChhhhcCHHH
Confidence 99999999999999999999999999999999987542 233 3568999999999999995 5789999999
Q ss_pred HhcCCCCcEEEEcCCCcc-cCHHHHHH--HHHhCCeeEEEeeccCCCCCCcCCccccc----cccccccc
Q 043239 222 MTALGKEGVIINVGRGAL-IDEKELVH--FLVRGSLVELVLMCLRTSLMCQRSCLHWI----MLCCLHML 284 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~-vd~~al~~--al~~~~i~ga~lDv~~~e~~~~~~~l~~~----~~~tph~~ 284 (286)
|+.||+|++|||+|||++ ||+++|.+ +|++|+|+ +++|||+. +..++++.. .++| |+|
T Consensus 331 l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~pl---p~~~~l~~l~~~nvv~t-H~a 395 (479)
T 1v8b_A 331 LLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRITL---PNGNKIIVLARGRLLNL-GCA 395 (479)
T ss_dssp HTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEEEC---TTSCEEEEEGGGSBHHH-HSS
T ss_pred HhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEEEC---CCCCeeeEecCCCEEEE-ecc
Confidence 999999999999999999 99999999 99999998 89999843 334555544 4888 998
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=99.96 E-value=5.7e-31 Score=252.12 Aligned_cols=190 Identities=16% Similarity=0.190 Sum_probs=158.9
Q ss_pred CCccEEE-EcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCC
Q 043239 69 PALEIVV-GSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLG 147 (286)
Q Consensus 69 ~~Lk~i~-~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~ 147 (286)
|+++.|+ .+++|+|++ ++++++||.++|+++++. +|||+. +|++......+..| |.+ ..+.++.
T Consensus 212 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~l-------~r~~~~~~~~l~~g-w~~----~~g~~L~ 276 (494)
T 3d64_A 212 AHIKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKSK-------FDNLYGCRESLVDG-IKR----ATDVMIA 276 (494)
T ss_dssp TTCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHH-------HHHHHHHHTTHHHH-HHH----HHCCCCT
T ss_pred hCcEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHHH-------HhhhHhhhhhhhhh-hhh----ccccccC
Confidence 7999998 889999998 789999999999999999 999954 46665554445555 643 2456899
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC-----CCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHH
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG-----VSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVM 222 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l 222 (286)
|++|||||+|.||+.+|++++++|++|++++++..+. .++ ...++++++++||+|++|+ .++++|+++.|
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~-~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l 351 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGY-RVVTMEYAADKADIFVTAT----GNYHVINHDHM 351 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTC-EECCHHHHTTTCSEEEECS----SSSCSBCHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCC-EeCCHHHHHhcCCEEEECC----CcccccCHHHH
Confidence 9999999999999999999999999999999987542 133 3468999999999999997 47899999999
Q ss_pred hcCCCCcEEEEcCCCcc-cCHHHHHHHHHhCCeeEEEeeccCCCCCCcCCccccc----cccccccc
Q 043239 223 TALGKEGVIINVGRGAL-IDEKELVHFLVRGSLVELVLMCLRTSLMCQRSCLHWI----MLCCLHML 284 (286)
Q Consensus 223 ~~mk~g~ilvn~srg~~-vd~~al~~al~~~~i~ga~lDv~~~e~~~~~~~l~~~----~~~tph~~ 284 (286)
+.||+|++|||+|||++ ||+++| ++|++|+|+ +++|+ +|++..++++.. .++| |+|
T Consensus 352 ~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv---~plp~~~pL~~l~~~nvv~t-H~a 412 (494)
T 3d64_A 352 KAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDH---IIFPDGKRVILLAEGRLVNL-GCA 412 (494)
T ss_dssp HHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEE---EECTTSCEEEEEGGGSBHHH-HTS
T ss_pred hhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEE---EECCCCCchhhcCCCCEEEE-eCc
Confidence 99999999999999999 699999 999999997 44554 466666666654 4889 998
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.94 E-value=8.3e-28 Score=217.47 Aligned_cols=186 Identities=18% Similarity=0.220 Sum_probs=150.9
Q ss_pred HHhccCCceEEEEe----------------CCCCCCHHHhccCCCccEEEEcCCCCCcCCh-hHHhhcCeEEEecC----
Q 043239 42 LSRHASSVRAILCL----------------GPSPLTSDTLSLLPALEIVVGSTAGIDHVDL-QECRRRGILVTNAG---- 100 (286)
Q Consensus 42 ~~~~~~~~d~i~~~----------------~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~-~~~~~~gI~v~n~~---- 100 (286)
+.+.++++|+++++ ...++++++++.+|+||+|+ +|+|++|+ ++++++||.|+|++
T Consensus 52 ~~~~~~~~d~ii~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~l~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~ 128 (293)
T 3d4o_A 52 DEVDWNTVDAILLPISGTNEAGKVDTIFSNESIVLTEEMIEKTPNHCVVY---SGISNTYLNQCMKKTNRTLVKLMERDD 128 (293)
T ss_dssp GGCCGGGCSEEECCTTCCCTTCBCCBSSCSCCCBCCHHHHHTSCTTCEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHH
T ss_pred hHHHHhcCCEEEeccccccCCceeecccccCCccchHHHHHhCCCCCEEE---ecCCCHHHHHHHHHcCCeEEEecCCce
Confidence 44556789999985 23468999999999999997 89999998 89999999999998
Q ss_pred --CCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEEC
Q 043239 101 --NAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTS 178 (286)
Q Consensus 101 --~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~ 178 (286)
++++.+|||++++++|.. .+.++.|++|||||+|.||+.+|++++++|++|++++
T Consensus 129 ~~~~~~~svae~a~~~~l~~-----------------------~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d 185 (293)
T 3d4o_A 129 IAIYNSIPTAEGTIMMAIQH-----------------------TDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGA 185 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----------------------CSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred eeeeccHhHHHHHHHHHHHh-----------------------cCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEE
Confidence 789999999999998862 1346899999999999999999999999999999999
Q ss_pred CCCCCCC-----Cccc--ccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHH
Q 043239 179 RKKKPGV-----SYPF--YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGAL-IDEKELVHFLV 250 (286)
Q Consensus 179 r~~~~~~-----~~~~--~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~-vd~~al~~al~ 250 (286)
|+.++.. +... ..+++++++++|+|++|+|. ++++++.++.||+++++||++||.. ++. +..+
T Consensus 186 r~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~~~~~----~~a~ 256 (293)
T 3d4o_A 186 RESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPA-----LVVTANVLAEMPSHTFVIDLASKPGGTDF----RYAE 256 (293)
T ss_dssp SSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS-----CCBCHHHHHHSCTTCEEEECSSTTCSBCH----HHHH
T ss_pred CCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCCh-----HHhCHHHHHhcCCCCEEEEecCCCCCCCH----HHHH
Confidence 9865421 2221 25788999999999999985 6888899999999999999999754 333 3333
Q ss_pred hCCeeEEEeecc
Q 043239 251 RGSLVELVLMCL 262 (286)
Q Consensus 251 ~~~i~ga~lDv~ 262 (286)
..++.....|-+
T Consensus 257 ~~Gv~~~~~~~l 268 (293)
T 3d4o_A 257 KRGIKALLVPGL 268 (293)
T ss_dssp HHTCEEEECCCH
T ss_pred HCCCEEEECCCC
Confidence 334544444444
No 39
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.90 E-value=2.9e-24 Score=194.73 Aligned_cols=173 Identities=15% Similarity=0.205 Sum_probs=136.8
Q ss_pred HHhccCCceEEEEe----C----------CCC--CCHHHhccCCCccEEEEcCCCCCcCC-hhHHhhcCeEEEecCCCCC
Q 043239 42 LSRHASSVRAILCL----G----------PSP--LTSDTLSLLPALEIVVGSTAGIDHVD-LQECRRRGILVTNAGNAFS 104 (286)
Q Consensus 42 ~~~~~~~~d~i~~~----~----------~~~--~~~~~l~~~~~Lk~i~~~~~G~d~id-~~~~~~~gI~v~n~~~~~~ 104 (286)
+.+.++++|+++++ . ..+ +++++++.+|++|+|+ +|+|++| +++++++||.|+|+|+++
T Consensus 54 ~~~~~~~~d~ii~~~~~~~~~~~i~s~~a~~~~~~~~~~l~~~~~l~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~- 129 (300)
T 2rir_A 54 DEIPFQQIDSIILPVSATTGEGVVSTVFSNEEVVLKQDHLDRTPAHCVIF---SGISNAYLENIAAQAKRKLVKLFERD- 129 (300)
T ss_dssp GGSCGGGCSEEECCSSCEETTTEECBSSCSSCEECCHHHHHTSCTTCEEE---ESSCCHHHHHHHHHTTCCEEEGGGSH-
T ss_pred hHHHHhcCCEEEeccccccCCcccccccccCCccchHHHHhhcCCCCEEE---EecCCHHHHHHHHHCCCEEEeecCCC-
Confidence 34556789999872 1 345 7899999999999998 8999999 899999999999999864
Q ss_pred cChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC
Q 043239 105 EDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG 184 (286)
Q Consensus 105 ~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~ 184 (286)
++ ++.|+++.+ +|.|... ....+.++.|+++||||+|.||+.+|++++++|++|++++|+.++.
T Consensus 130 -~v---------~~~r~~~~~-----~g~~~~~-~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~ 193 (300)
T 2rir_A 130 -DI---------AIYNSIPTV-----EGTIMLA-IQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHL 193 (300)
T ss_dssp -HH---------HHHHHHHHH-----HHHHHHH-HHTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred -ce---------EEEcCccHH-----HHHHHHH-HHhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 22 334555444 2334210 0014568999999999999999999999999999999999986532
Q ss_pred C-----Ccc--cccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcc
Q 043239 185 V-----SYP--FYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGAL 239 (286)
Q Consensus 185 ~-----~~~--~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~ 239 (286)
. +.. ...++++++++||+|++|+|. ++++++.++.||+|+++||++||..
T Consensus 194 ~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 194 ARITEMGLVPFHTDELKEHVKDIDICINTIPS-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp HHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred HHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 1 222 135789999999999999996 5888899999999999999999854
No 40
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.84 E-value=1.4e-22 Score=194.46 Aligned_cols=196 Identities=16% Similarity=0.155 Sum_probs=147.3
Q ss_pred CCccEE-EEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCC
Q 043239 69 PALEIV-VGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLG 147 (286)
Q Consensus 69 ~~Lk~i-~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~ 147 (286)
++++-+ -.+++|+|++ .++.++||.++|+++++. +|||+.+ |++.........+ |.+. .+..+.
T Consensus 209 ~~i~GvveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~~~-------r~l~~~~~s~~~g-~~r~----~~~~l~ 273 (494)
T 3ce6_A 209 ESVKGVTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKSKF-------DNKYGTRHSLIDG-INRG----TDALIG 273 (494)
T ss_dssp HHCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHTT-------HHHHHHHHHHHHH-HHHH----HCCCCT
T ss_pred cCeEEEEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHHHH-------hhhhhhhhhhhHH-HHhc----cCCCCC
Confidence 344444 4779999998 778899999999999998 9999543 4443332222222 3211 233588
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC-----CCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHH
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG-----VSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVM 222 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l 222 (286)
|++|+|+|+|.||+.+|++++++|++|+++++++.+. .++. ..+++++++++|+|+.|++ +.++++++.+
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~~l~e~l~~aDvVi~atg----t~~~i~~~~l 348 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VVTVEEAIGDADIVVTATG----NKDIIMLEHI 348 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCHHHHGGGCSEEEECSS----SSCSBCHHHH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-EecHHHHHhCCCEEEECCC----CHHHHHHHHH
Confidence 9999999999999999999999999999999987542 2333 4578899999999999975 5568888899
Q ss_pred hcCCCCcEEEEcCCCcc-cCHHHHHH-HHHhCCeeEEEeeccCCCCCCcCCcc--ccccc----ccccccC
Q 043239 223 TALGKEGVIINVGRGAL-IDEKELVH-FLVRGSLVELVLMCLRTSLMCQRSCL--HWIML----CCLHMLL 285 (286)
Q Consensus 223 ~~mk~g~ilvn~srg~~-vd~~al~~-al~~~~i~ga~lDv~~~e~~~~~~~l--~~~~~----~tph~~~ 285 (286)
+.||+|++++|+||+.. +|..+|.. +|+++.|. +.+|+++.++...+..+ ..+.+ +|||+++
T Consensus 349 ~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~~~~l~LL~~grlvnL~~~TPH~a~ 418 (494)
T 3ce6_A 349 KAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSF 418 (494)
T ss_dssp HHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTTCCEEEEEGGGSCHHHHHSCCSCHH
T ss_pred HhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCcchHHHHHhCCCEEeccCCCCCccc
Confidence 99999999999999998 99999998 88888887 56798865331121111 11122 8999864
No 41
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.83 E-value=6.2e-21 Score=178.23 Aligned_cols=245 Identities=11% Similarity=0.085 Sum_probs=171.4
Q ss_pred hhcccCCCCCCchhhhC-CCcEEecCCCC----CCCchHHH----------HhccCCceEEEEeCCCCCCHHHhccCCCc
Q 043239 7 DAYRRGAPGCFNPPLSE-RFTLLDPLLHS----ADSTHSFL----------SRHASSVRAILCLGPSPLTSDTLSLLPAL 71 (286)
Q Consensus 7 ~~~~~~~~~~~~~~l~~-~~~~~~~~~~~----~~~~~~~~----------~~~~~~~d~i~~~~~~~~~~~~l~~~~~L 71 (286)
.-+|-.+.|...++|.+ .++++ +.... .-+-+++. .+.++++|+|+. ...++++++....++.
T Consensus 12 ~E~Rv~ltP~~v~~L~~~G~~V~-ve~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~~adii~~-vk~p~~~e~~~l~~~~ 89 (377)
T 2vhw_A 12 NEFRVAITPAGVAELTRRGHEVL-IQAGAGEGSAITDADFKAAGAQLVGTADQVWADADLLLK-VKEPIAAEYGRLRHGQ 89 (377)
T ss_dssp TCCCCSCCHHHHHHHHHTTCEEE-EETTTTGGGTCCHHHHHHHTCEEESCHHHHHHHCSEEEC-SSCCCGGGGGGCCTTC
T ss_pred CCcccCcCHHHHHHHHhCCCEEE-EeCCCCcCCCCCHHHHHHCCCEEecCHHHHhccCCEEEE-eCCCChHHHhhcCCCC
Confidence 34555667777777765 45554 32111 11123332 133446898764 3456777777777888
Q ss_pred cEEEEcCCCCCcCChhHHhhcCeEEE----------ecCCCCCcChHHHHHHHHHHHH-hcchHHHHHHHcCCCCCCCCC
Q 043239 72 EIVVGSTAGIDHVDLQECRRRGILVT----------NAGNAFSEDGADYVVGLLVDVL-RRVSSIDRFVRNGLWPDHGAY 140 (286)
Q Consensus 72 k~i~~~~~G~d~id~~~~~~~gI~v~----------n~~~~~~~~vAE~~l~~~L~~~-R~~~~~~~~~~~~~w~~~~~~ 140 (286)
.++.....++|...++.+.++||++. |.|.+ .++||++..+++.+. |++.. ...|.|....
T Consensus 90 ~l~~~~~~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~--s~~ae~ag~~a~~~a~r~l~~----~~~g~~~~~~-- 161 (377)
T 2vhw_A 90 ILFTFLHLAASRACTDALLDSGTTSIAYETVQTADGALPLL--APMSEVAGRLAAQVGAYHLMR----TQGGRGVLMG-- 161 (377)
T ss_dssp EEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTT--HHHHHHHHHHHHHHHHHHTSG----GGTSCCCCTT--
T ss_pred EEEEEecccCCHHHHHHHHHcCCeEEEeeeccccCCCcccc--CchHHHHHHHHHHHHHHHHHH----hcCCCccccc--
Confidence 88888788888888999999999997 44544 477799985554444 77633 3344433211
Q ss_pred CCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------Ccc------cccCHHHhhcCCCEEEEec-
Q 043239 141 PLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------SYP------FYANVSGLAADSDVLIVCC- 207 (286)
Q Consensus 141 ~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~~~------~~~~l~e~l~~aDiV~~~l- 207 (286)
...++.|++|+|+|+|.||+.+++.++++|++|+++|++.++.. +.. ...+++++++++|+|+.++
T Consensus 162 -~~~~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~ 240 (377)
T 2vhw_A 162 -GVPGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVL 240 (377)
T ss_dssp -CBTTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred -CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCC
Confidence 12368999999999999999999999999999999999765421 211 1346778889999999977
Q ss_pred -cCChhhhhcccHHHHhcCCCCcEEEEcC--CCcccCHHHHHHHHHhCCeeEEEeeccCC-CCCCcCCcccccc----cc
Q 043239 208 -ALTEETHHMINKDVMTALGKEGVIINVG--RGALIDEKELVHFLVRGSLVELVLMCLRT-SLMCQRSCLHWIM----LC 279 (286)
Q Consensus 208 -p~~~~t~~~i~~~~l~~mk~g~ilvn~s--rg~~vd~~al~~al~~~~i~ga~lDv~~~-e~~~~~~~l~~~~----~~ 279 (286)
|.+ ++..++.++.++.||+|++|||+| +|+ ||+. ||.+.+.+++... .+
T Consensus 241 ~p~~-~t~~li~~~~l~~mk~g~~iV~va~~~Gg----------------------v~e~~ep~~~~~~~~~~~~v~i~~ 297 (377)
T 2vhw_A 241 VPGA-KAPKLVSNSLVAHMKPGAVLVDIAIDQGG----------------------CFEGSRPTTYDHPTFAVHDTLFYC 297 (377)
T ss_dssp CTTS-CCCCCBCHHHHTTSCTTCEEEEGGGGTTC----------------------SBTTCCCBCSSSCEEEETTEEEEC
T ss_pred cCCC-CCcceecHHHHhcCCCCcEEEEEecCCCC----------------------ccccccCCCCCCCEEEECCEEEEe
Confidence 444 678889999999999999999998 332 6777 7766666555443 39
Q ss_pred cccccC
Q 043239 280 CLHMLL 285 (286)
Q Consensus 280 tph~~~ 285 (286)
|||+++
T Consensus 298 ~phl~~ 303 (377)
T 2vhw_A 298 VANMPA 303 (377)
T ss_dssp BTTGGG
T ss_pred cCCcch
Confidence 999986
No 42
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.70 E-value=4.6e-18 Score=159.95 Aligned_cols=224 Identities=15% Similarity=0.164 Sum_probs=147.8
Q ss_pred hcccCCCCCCchhhhC-CCcEEecCCCCC----CCchHHHH---------hccCCceEEEEeCCCCCCHHHhccC-CCcc
Q 043239 8 AYRRGAPGCFNPPLSE-RFTLLDPLLHSA----DSTHSFLS---------RHASSVRAILCLGPSPLTSDTLSLL-PALE 72 (286)
Q Consensus 8 ~~~~~~~~~~~~~l~~-~~~~~~~~~~~~----~~~~~~~~---------~~~~~~d~i~~~~~~~~~~~~l~~~-~~Lk 72 (286)
-+|-...|....+|.+ .+.+.... ..+ -+-+++.+ +..+ +|+|+.. .. .+++.++.+ |+++
T Consensus 20 E~Rv~ltP~~v~~L~~~G~~V~ve~-~ag~~~gf~d~~y~~aGa~i~~~~~~~~-adiil~v-k~-p~~~~i~~l~~~~~ 95 (401)
T 1x13_A 20 ETRVAATPKTVEQLLKLGFTVAVES-GAGQLASFDDKAFVQAGAEIVEGNSVWQ-SEIILKV-NA-PLDDEIALLNPGTT 95 (401)
T ss_dssp CCCCSCCHHHHHHHHHTTCEEEEET-TTTGGGTCCHHHHHHHTCEEECGGGGGS-SSEEECS-SC-CCHHHHTTCCTTCE
T ss_pred CeeeCCCHHHHHHHHHCCCEEEEEE-CCCcccCCChHHHHHCCCEEeccHHHhc-CCeEEEe-CC-CCHHHHHHhcCCCc
Confidence 3455566666677755 45543321 111 11133321 1333 8988763 22 357778887 7899
Q ss_pred EEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHH--HHHHHcCCC--CCCCC---CCCccc
Q 043239 73 IVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSI--DRFVRNGLW--PDHGA---YPLGST 145 (286)
Q Consensus 73 ~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~--~~~~~~~~w--~~~~~---~~~~~~ 145 (286)
+|+..+.|+|+++++++.++||++.+. +.|+|++.++.|.+++.+... ...++.+.| .+... ...+ +
T Consensus 96 li~~~~~~~d~~~~~al~~~gI~v~~~-----e~v~~~~~a~~l~~l~~~a~~ag~~av~~~~~~~~~~~~~~~~~~g-~ 169 (401)
T 1x13_A 96 LVSFIWPAQNPELMQKLAERNVTVMAM-----DSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAG-K 169 (401)
T ss_dssp EEECCCGGGCHHHHHHHHHTTCEEEEG-----GGCCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHCSSCSSCEEETTE-E
T ss_pred EEEEecCCCCHHHHHHHHHCCCEEEEe-----ehhhhhhhhcccchHHHHHHHHHHHHHHHHHHhcccccCCceeecc-C
Confidence 999999999999999999999999753 344444444433333332221 112222222 11100 0012 5
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Ccccc---------------------------cCH
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFY---------------------------ANV 193 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~---------------------------~~l 193 (286)
+.|++|+|+|+|.||..+++.++.+|++|+++|++..... +.... .++
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 7899999999999999999999999999999999875421 22111 036
Q ss_pred HHhhcCCCEEEEe--ccCChhhhhcccHHHHhcCCCCcEEEEcC--CCcccCH
Q 043239 194 SGLAADSDVLIVC--CALTEETHHMINKDVMTALGKEGVIINVG--RGALIDE 242 (286)
Q Consensus 194 ~e~l~~aDiV~~~--lp~~~~t~~~i~~~~l~~mk~g~ilvn~s--rg~~vd~ 242 (286)
.++++++|+|+.+ +|.. .+..+++++.++.||+|++|||+| ||+.+++
T Consensus 250 ~e~~~~aDvVI~~~~~pg~-~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 250 AAQAKEVDIIVTTALIPGK-PAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp HHHHHHCSEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred HHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 7888899999999 5532 356788899999999999999999 9888776
No 43
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.68 E-value=4.6e-17 Score=153.08 Aligned_cols=179 Identities=16% Similarity=0.164 Sum_probs=124.5
Q ss_pred CceEEEEeCCCCCCHHHhccCCCc----cEE-EEcCCCCCcCC-hhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhc
Q 043239 48 SVRAILCLGPSPLTSDTLSLLPAL----EIV-VGSTAGIDHVD-LQECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRR 121 (286)
Q Consensus 48 ~~d~i~~~~~~~~~~~~l~~~~~L----k~i-~~~~~G~d~id-~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~ 121 (286)
..++|+=- ...++.-+-.+.|++ +=+ =-+++|+..+. .....+.+|+|.|++. ++.++..-........
T Consensus 122 ~p~~ilDd-Ggdl~~~~h~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPVinvnd----svtk~~~Dn~~Gt~~s 196 (436)
T 3h9u_A 122 YPNMLLDD-GGDLTNYVLDECKELDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVND----SVTKSKFDNLYGCRES 196 (436)
T ss_dssp CCSEEEES-SSHHHHHHHHHC-CCTTTCCCEEECSHHHHHHHHHHHHHTCCCSCEEECTT----SHHHHTTHHHHHHHHH
T ss_pred CCceEecc-ccHHHHHHHHHhHHHHhhccceeeccCcChHHHHHHHHcCCCCCceEeech----hhhhhhhhccccchHH
Confidence 34555532 233444333444443 222 23456665542 3345678999999976 5555544444443333
Q ss_pred chHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC-----CCcccccCHHHh
Q 043239 122 VSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG-----VSYPFYANVSGL 196 (286)
Q Consensus 122 ~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~l~e~ 196 (286)
+...... . .+.++.|++|||+|+|.||+.+|++|+++|++|+++++++... .++ ...+++++
T Consensus 197 lldgi~r--a----------tg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~-~~~sL~ea 263 (436)
T 3h9u_A 197 LVDGIKR--A----------TDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGY-QVLLVEDV 263 (436)
T ss_dssp HHHHHHH--H----------HCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-EECCHHHH
T ss_pred HHHHHHH--h----------cCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCC-eecCHHHH
Confidence 3222211 1 2456899999999999999999999999999999999976432 122 34699999
Q ss_pred hcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHH
Q 043239 197 AADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGAL-IDEKELVHF 248 (286)
Q Consensus 197 l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~-vd~~al~~a 248 (286)
+++||+|+++ ..+.++|+++.|+.||+|++|||+|||.+ ||.++|.+.
T Consensus 264 l~~ADVVilt----~gt~~iI~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 264 VEEAHIFVTT----TGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp TTTCSEEEEC----SSCSCSBCTTTGGGCCTTEEEEECSSSGGGBCHHHHHHH
T ss_pred HhhCCEEEEC----CCCcCccCHHHHhhcCCCcEEEEeCCCCCccCHHHHHhh
Confidence 9999999974 45788999999999999999999999997 999999864
No 44
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.66 E-value=1.8e-16 Score=148.24 Aligned_cols=228 Identities=14% Similarity=0.173 Sum_probs=146.8
Q ss_pred hcccCCCCCCchhhhC-CCcEEecCCCC----CCCchHHH----------HhccCCceEEEEeCCCCC----CHHHhccC
Q 043239 8 AYRRGAPGCFNPPLSE-RFTLLDPLLHS----ADSTHSFL----------SRHASSVRAILCLGPSPL----TSDTLSLL 68 (286)
Q Consensus 8 ~~~~~~~~~~~~~l~~-~~~~~~~~~~~----~~~~~~~~----------~~~~~~~d~i~~~~~~~~----~~~~l~~~ 68 (286)
-+|-.+.|...++|.+ .+.+. +.... .-+-+++. .+.++++|+|+.. ..++ +++.++.+
T Consensus 13 E~Rv~l~P~~v~~L~~~G~~V~-ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~~adiil~v-~~p~~~~~~~~~i~~l 90 (384)
T 1l7d_A 13 EDRVAISPEVVKKLVGLGFEVI-VEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKV-QRPMTAEEGTDEVALI 90 (384)
T ss_dssp CCCCSCCHHHHHHHHHTTCEEE-EETTTTGGGTCCHHHHHHTTCEEESSHHHHHSSCSEEEEE-ECCCCGGGSCCGGGGS
T ss_pred CcccCCCHHHHHHHHhCCCEEE-EEcCCCccCCCCHHHHHHCCCEEecChhhhhcCCCEEEEe-cCcccccCCHHHHHhh
Confidence 3455566666677766 44443 32111 11113332 2445789998874 3455 68888988
Q ss_pred C-CccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCC--C-c-
Q 043239 69 P-ALEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYP--L-G- 143 (286)
Q Consensus 69 ~-~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~--~-~- 143 (286)
+ .+++++....+.|+.+++++.++||++++.. .....+++..+. +|+..+.+. ....+..+.|.....++ + +
T Consensus 91 ~~~~~~i~~~~~~~~~~~~~~~~~~gi~~~~~e-~~~~~~~~~~l~-~l~~~a~~a-g~~av~~~~~~~~~~~~~~~~~~ 167 (384)
T 1l7d_A 91 KEGAVLMCHLGALTNRPVVEALTKRKITAYAME-LMPRISRAQSMD-ILSSQSNLA-GYRAVIDGAYEFARAFPMMMTAA 167 (384)
T ss_dssp CTTCEEEEECCGGGCHHHHHHHHHTTCEEEEGG-GCCCSGGGGGGC-HHHHHHHHH-HHHHHHHHHHHCSSCSSCEEETT
T ss_pred ccCCEEEEEecccCCHHHHHHHHHCCCEEEEec-cccccccccccc-hhhHHHHHH-HHHHHHHHHHHhhhcccchhccC
Confidence 6 5899999999999999999999999999842 222222222222 222222221 11122222221000000 1 1
Q ss_pred ccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Ccccc--c-------------------------
Q 043239 144 STLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFY--A------------------------- 191 (286)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~--~------------------------- 191 (286)
.++.|++|+|+|+|.+|..+++.++.+|++|+++|++..+.. +.... .
T Consensus 168 ~~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~ 247 (384)
T 1l7d_A 168 GTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ 247 (384)
T ss_dssp EEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence 368999999999999999999999999999999999876421 21111 0
Q ss_pred --CHHHhhcCCCEEEEec--cCChhhhhcccHHHHhcCCCCcEEEEcC--CCcccC
Q 043239 192 --NVSGLAADSDVLIVCC--ALTEETHHMINKDVMTALGKEGVIINVG--RGALID 241 (286)
Q Consensus 192 --~l~e~l~~aDiV~~~l--p~~~~t~~~i~~~~l~~mk~g~ilvn~s--rg~~vd 241 (286)
.+.++++++|+|+.++ |.. .+..+++++.++.||+|+++||++ ||+.++
T Consensus 248 ~~~l~~~~~~aDvVi~~~~~pg~-~~~~li~~~~l~~mk~g~vivdva~~~gg~~~ 302 (384)
T 1l7d_A 248 AEAVLKELVKTDIAITTALIPGK-PAPVLITEEMVTKMKPGSVIIDLAVEAGGNCP 302 (384)
T ss_dssp HHHHHHHHTTCSEEEECCCCTTS-CCCCCSCHHHHTTSCTTCEEEETTGGGTCSST
T ss_pred HHHHHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCCEEEEEecCCCCCee
Confidence 1678889999999887 433 245678899999999999999999 876543
No 45
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.65 E-value=9.4e-17 Score=149.39 Aligned_cols=217 Identities=14% Similarity=0.107 Sum_probs=143.3
Q ss_pred hhcccCCCCCCchhhhC-CCcEEecCCCC----CCCchHHHH---------hccCCceEEEEeCCCCCCHHHhccC-CCc
Q 043239 7 DAYRRGAPGCFNPPLSE-RFTLLDPLLHS----ADSTHSFLS---------RHASSVRAILCLGPSPLTSDTLSLL-PAL 71 (286)
Q Consensus 7 ~~~~~~~~~~~~~~l~~-~~~~~~~~~~~----~~~~~~~~~---------~~~~~~d~i~~~~~~~~~~~~l~~~-~~L 71 (286)
.-+|-.+.|...++|.+ .++++ +.... .-+-+++.. +.+ ++|+|+.. ..++ ++.++.+ ++.
T Consensus 12 ~e~Rv~l~P~~v~~L~~~g~~v~-ve~~ag~~~~~~d~~y~~aga~i~~~~~~~-~ad~il~v-k~p~-~~~~~~l~~~~ 87 (369)
T 2eez_A 12 LENRVALTPGGVESLVRRGHTVL-VERGAGEGSGLSDAEYARAGAELVGREEAW-GAEMVVKV-KEPL-PEEYGFLREGL 87 (369)
T ss_dssp TCCCCSSCHHHHHHHHHTTCEEE-EETTTTGGGTCCHHHHHHHTCEEECHHHHT-TSSEEECS-SCCC-GGGGGGCCTTC
T ss_pred CCceeCcCHHHHHHHHhCCCEEE-EeCCCCccCCCCHHHHHHCCCEEeccccee-cCCEEEEE-CCCC-HHHHhhcCCCc
Confidence 35566677777777765 45553 32122 112233332 245 79998753 3444 4446665 789
Q ss_pred cEEEEcCCCCCcCChhHHhhcCeEEE---ecCCC-CC----cChHHHHH--HHHHHHHhcchHHHHHHHcCCCCCCCCCC
Q 043239 72 EIVVGSTAGIDHVDLQECRRRGILVT---NAGNA-FS----EDGADYVV--GLLVDVLRRVSSIDRFVRNGLWPDHGAYP 141 (286)
Q Consensus 72 k~i~~~~~G~d~id~~~~~~~gI~v~---n~~~~-~~----~~vAE~~l--~~~L~~~R~~~~~~~~~~~~~w~~~~~~~ 141 (286)
+++.....+.|..+++.+.++||++. +.+.. .. .++++.+- +.+ ...+.+..... .++.|..
T Consensus 88 ~~~~~~~~~~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~-~a~~~l~~~~~--g~~~~~~----- 159 (369)
T 2eez_A 88 ILFTYLHLAADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQ-VGAQFLEKPKG--GRGVLLG----- 159 (369)
T ss_dssp EEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHH-HHHHHTSGGGT--SCCCCTT-----
T ss_pred EEEEEecccCCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHH-HHHHHHHHhcC--CCceecC-----
Confidence 99999999999999999999999997 44442 12 34455444 333 33333333210 1112221
Q ss_pred CcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------Ccc------cccCHHHhhcCCCEEEEeccC
Q 043239 142 LGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------SYP------FYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 142 ~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~~~------~~~~l~e~l~~aDiV~~~lp~ 209 (286)
...++.+++|+|+|.|.||+.+++.++.+|++|++++++.++.. +.. ...+++++++++|+|+.|++.
T Consensus 160 ~~~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 160 GVPGVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp CBTBBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 12468999999999999999999999999999999998764321 111 124567788999999999986
Q ss_pred Ch-hhhhcccHHHHhcCCCCcEEEEcC
Q 043239 210 TE-ETHHMINKDVMTALGKEGVIINVG 235 (286)
Q Consensus 210 ~~-~t~~~i~~~~l~~mk~g~ilvn~s 235 (286)
.. .+..++.++.++.||+|+++||++
T Consensus 240 ~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ------CCSCHHHHTTSCTTCEEEECC
T ss_pred CccccchhHHHHHHHhhcCCCEEEEEe
Confidence 65 577788999999999999999998
No 46
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.64 E-value=2.6e-16 Score=147.88 Aligned_cols=150 Identities=16% Similarity=0.165 Sum_probs=113.6
Q ss_pred cCCCCCcCC-hhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEc
Q 043239 77 STAGIDHVD-LQECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVG 155 (286)
Q Consensus 77 ~~~G~d~id-~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG 155 (286)
+++|+-.+- ....-...+++.|+.+ ++..+-+-......+.+....... .+.++.|++++|+|
T Consensus 191 TtTGv~rL~~m~~~g~L~~PvinVnd----s~tK~~fDn~yG~~eslvdgI~Ra------------tg~~L~GKTVgVIG 254 (464)
T 3n58_A 191 TTTGVNRLYQLQKKGLLPFPAINVND----SVTKSKFDNKYGCKESLVDGIRRG------------TDVMMAGKVAVVCG 254 (464)
T ss_dssp SHHHHHHHHHHHHHTCCCSCEEECTT----SHHHHTTHHHHHHHHHHHHHHHHH------------HCCCCTTCEEEEEC
T ss_pred cccchHHHHHHHHcCCCCCCEEeecc----HhhhhhhhhhhcchHHHHHHHHHh------------cCCcccCCEEEEEC
Confidence 455555441 1222345688888654 777777766666655554433221 24569999999999
Q ss_pred CChHHHHHHHHhccCCCEEEEECCCCCCC-----CCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcE
Q 043239 156 LGSIGSEVAKRLVPFGCSIAYTSRKKKPG-----VSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGV 230 (286)
Q Consensus 156 ~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~i 230 (286)
+|.||+.+|++++++|++|+++++++... .++ ...++++++++||+|+++. .+.++|+++.|+.||+|++
T Consensus 255 ~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~-~vv~LeElL~~ADIVv~at----gt~~lI~~e~l~~MK~GAI 329 (464)
T 3n58_A 255 YGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGF-EVVTLDDAASTADIVVTTT----GNKDVITIDHMRKMKDMCI 329 (464)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTC-EECCHHHHGGGCSEEEECC----SSSSSBCHHHHHHSCTTEE
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCc-eeccHHHHHhhCCEEEECC----CCccccCHHHHhcCCCCeE
Confidence 99999999999999999999998865321 122 2468999999999999864 3688999999999999999
Q ss_pred EEEcCCCcc-cCHHHHHH
Q 043239 231 IINVGRGAL-IDEKELVH 247 (286)
Q Consensus 231 lvn~srg~~-vd~~al~~ 247 (286)
|||+|||.+ +|.++|.+
T Consensus 330 LINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 330 VGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp EEECSSSTTTBTCGGGTT
T ss_pred EEEcCCCCcccCHHHHHh
Confidence 999999998 99998874
No 47
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.62 E-value=4.6e-16 Score=140.72 Aligned_cols=128 Identities=13% Similarity=0.177 Sum_probs=107.0
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMT 223 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~ 223 (286)
++|||||+|.||..||++|.+.|++|++|||++++.. +.....++.|+++.||+|++|+|..+..+.++....+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 4899999999999999999999999999999987654 34557899999999999999999888888888888999
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCCcCCccccc
Q 043239 224 ALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMCQRSCLHWI 276 (286)
Q Consensus 224 ~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~~~~~l~~~ 276 (286)
.++++.++||+++..+-+.+.+.+.+.+.++......|+..++......+..+
T Consensus 86 ~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~~~a~~g~l~im 138 (297)
T 4gbj_A 86 KLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAKVGNIC 138 (297)
T ss_dssp HHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCCEEE
T ss_pred hcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCccccccccceee
Confidence 99999999999999999999999999999999888888887765555544433
No 48
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.62 E-value=1.4e-16 Score=144.26 Aligned_cols=128 Identities=12% Similarity=0.151 Sum_probs=111.0
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcccH--HH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMINK--DV 221 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~--~~ 221 (286)
++||+||+|.||..||++|.+.|++|++|||++++.. +.....++.|+++.||+|++|+|..++.+.++.. ..
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 5899999999999999999999999999999987543 5566789999999999999999999888887743 36
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCCcCCccccc
Q 043239 222 MTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMCQRSCLHWI 276 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~~~~~l~~~ 276 (286)
++.+++|.++||+|+.++-+.+.+.+.+++..+...-..|+...+.+.++.|..+
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsGg~~~A~~G~L~im 138 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFM 138 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHHTCEEEE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCCCHHHHHhCCEEEE
Confidence 8889999999999999999999999999999999888888888776666655444
No 49
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.57 E-value=5.4e-17 Score=152.98 Aligned_cols=130 Identities=18% Similarity=0.144 Sum_probs=97.7
Q ss_pred ccc-CCCCEEEEEcCChHHHHHHHHhcc-CCCEEEEECCCCCCCCCcccccCHHHhhcCCCE-EEEeccCChhhhhcccH
Q 043239 143 GST-LGGKRVGIVGLGSIGSEVAKRLVP-FGCSIAYTSRKKKPGVSYPFYANVSGLAADSDV-LIVCCALTEETHHMINK 219 (286)
Q Consensus 143 ~~~-l~g~~vgIiG~G~iG~~~A~~l~~-~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDi-V~~~lp~~~~t~~~i~~ 219 (286)
|.+ ++|++++|+|+|+||+.+|+++++ +|++|++++++....... ...+++++++.+|. .++ +|+ ++|++ ++.
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~~~~-~gvdl~~L~~~~d~~~~l-~~l-~~t~~-i~~ 281 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNP-DGLNADEVLKWKNEHGSV-KDF-PGATN-ITN 281 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEEEE-EEECHHHHHHHHHHHSSS-TTC-TTSEE-ECH
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCccccCc-cCCCHHHHHHHHHhcCEe-ecC-ccCee-eCH
Confidence 556 999999999999999999999999 999999885443211110 11266776664443 222 465 56777 788
Q ss_pred HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCCcC-Cccc--ccccccccc
Q 043239 220 DVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMCQR-SCLH--WIMLCCLHM 283 (286)
Q Consensus 220 ~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~~~-~~l~--~~~~~tph~ 283 (286)
+.|..||+ .++||++||.+||+++ +++|+.+.|.+++ .||++++ .+++ .+.++|||+
T Consensus 282 ~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~itPhi 341 (419)
T 1gtm_A 282 EELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGILQIPDF 341 (419)
T ss_dssp HHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCEEECHH
T ss_pred HHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEEEECch
Confidence 88899988 6999999999999999 6999999999887 6776543 3333 334999999
No 50
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.55 E-value=8.1e-15 Score=137.57 Aligned_cols=149 Identities=15% Similarity=0.264 Sum_probs=107.4
Q ss_pred cCCCCCcCC-hhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEc
Q 043239 77 STAGIDHVD-LQECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVG 155 (286)
Q Consensus 77 ~~~G~d~id-~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG 155 (286)
+++|+-.+- ....-+..++|.|..+ ++..+-+-........+...... . .+..+.|++++|+|
T Consensus 164 TttGv~rl~~~~~~g~L~~Pvi~vnd----s~tK~~fDn~yGt~~s~~~gi~r--a----------t~~~L~GktV~ViG 227 (435)
T 3gvp_A 164 SVTGVHRLYQLSKAGKLCVPAMNVND----SVTKQKFDNLYCCRESILDGLKR--T----------TDMMFGGKQVVVCG 227 (435)
T ss_dssp CHHHHHHHTCC--CCCCCSCEEECTT----CHHHHHHHTHHHHHHHHHHHHHH--H----------HCCCCTTCEEEEEC
T ss_pred cchhHHHHHHHHHcCCCCCCEEEecc----hhhhhhhhhhhhhHHHHHHHHHH--h----------hCceecCCEEEEEe
Confidence 455655441 2233356799998766 45555444443333322222111 1 23468999999999
Q ss_pred CChHHHHHHHHhccCCCEEEEECCCCCCC-----CCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcE
Q 043239 156 LGSIGSEVAKRLVPFGCSIAYTSRKKKPG-----VSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGV 230 (286)
Q Consensus 156 ~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~i 230 (286)
+|.||+.+|++++++|++|+++++++... .++ ...+++++++++|+|++| +.+.++|+++.|+.||+|++
T Consensus 228 ~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~-~v~~Leeal~~ADIVi~a----tgt~~lI~~e~l~~MK~gai 302 (435)
T 3gvp_A 228 YGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGF-RLVKLNEVIRQVDIVITC----TGNKNVVTREHLDRMKNSCI 302 (435)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-EECCHHHHTTTCSEEEEC----SSCSCSBCHHHHHHSCTTEE
T ss_pred eCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCC-EeccHHHHHhcCCEEEEC----CCCcccCCHHHHHhcCCCcE
Confidence 99999999999999999999999876321 122 246899999999999995 34788999999999999999
Q ss_pred EEEcCCCcc-cCHHHHH
Q 043239 231 IINVGRGAL-IDEKELV 246 (286)
Q Consensus 231 lvn~srg~~-vd~~al~ 246 (286)
|||+|||.+ +|.++|.
T Consensus 303 lINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 303 VCNMGHSNTEIDVASLR 319 (435)
T ss_dssp EEECSSTTTTBTGGGGC
T ss_pred EEEecCCCccCCHHHHH
Confidence 999999987 7777664
No 51
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.51 E-value=6.5e-15 Score=134.32 Aligned_cols=122 Identities=13% Similarity=0.180 Sum_probs=102.4
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC-----CCcccccCHHHhhcCCCEEEEeccCChhhhhcccH
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG-----VSYPFYANVSGLAADSDVLIVCCALTEETHHMINK 219 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~ 219 (286)
....++|||||+|.||..+|+.|...|++|++|||++++. .+.....++++++++||+|++|+|.....+.++..
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 107 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA 107 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence 3467899999999999999999999999999999987642 24455679999999999999999977677766643
Q ss_pred -HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCC
Q 043239 220 -DVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSL 266 (286)
Q Consensus 220 -~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~ 266 (286)
..++.+++|.++||++++.+.+.+.+.+.+.+..+......|+..++
T Consensus 108 ~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~ 155 (320)
T 4dll_A 108 QGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVSGGTV 155 (320)
T ss_dssp TCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECHHH
T ss_pred hhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHh
Confidence 56778999999999999999999999999999888776666766554
No 52
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.51 E-value=1.7e-14 Score=130.80 Aligned_cols=125 Identities=15% Similarity=0.104 Sum_probs=102.9
Q ss_pred ccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhccc
Q 043239 144 STLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMIN 218 (286)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~ 218 (286)
.++..++|||||+|.||..+|+.|...|++|++|||++++.. +.....++.+++++||+|++|+|....++.++.
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~ 84 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG 84 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc
Confidence 356678999999999999999999999999999999876432 344567999999999999999997777777775
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCC
Q 043239 219 KDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMC 268 (286)
Q Consensus 219 ~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~ 268 (286)
++.+..+++|.++||+++..+.+.+.+.+.+.+..+......|+...|..
T Consensus 85 ~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~ 134 (306)
T 3l6d_A 85 MPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNV 134 (306)
T ss_dssp STTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGT
T ss_pred ccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccc
Confidence 32345678999999999999999999999999888876666677655433
No 53
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.50 E-value=4.3e-14 Score=128.46 Aligned_cols=139 Identities=14% Similarity=0.137 Sum_probs=95.5
Q ss_pred HHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCC--CCC-----CCcccccCHHHhh
Q 043239 126 DRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKK--KPG-----VSYPFYANVSGLA 197 (286)
Q Consensus 126 ~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~--~~~-----~~~~~~~~l~e~l 197 (286)
+++.+++.|.+.+.++.......++|||||+|.||..+|+.|...|+ +|++|||+. +.. .+.....++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~ 81 (312)
T 3qsg_A 2 HHHHHHSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVA 81 (312)
T ss_dssp -----------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHH
T ss_pred CcccccccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHH
Confidence 34566777776544444444556899999999999999999999999 999999973 221 2444567899999
Q ss_pred cCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC--CeeEEEeeccCCCC
Q 043239 198 ADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRG--SLVELVLMCLRTSL 266 (286)
Q Consensus 198 ~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~--~i~ga~lDv~~~e~ 266 (286)
++||+|++|+|...... .+ ++..+.++++.+|||+++..+....++.+.+.+. .+......|+..++
T Consensus 82 ~~aDvVi~~vp~~~~~~-~~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~ 150 (312)
T 3qsg_A 82 GECDVIFSLVTAQAALE-VA-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVK 150 (312)
T ss_dssp HHCSEEEECSCTTTHHH-HH-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCST
T ss_pred hcCCEEEEecCchhHHH-HH-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCch
Confidence 99999999999766554 33 5678889999999999999999999999999886 66655556776544
No 54
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.48 E-value=3.1e-14 Score=129.23 Aligned_cols=124 Identities=10% Similarity=0.029 Sum_probs=101.9
Q ss_pred cccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcc
Q 043239 143 GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMI 217 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i 217 (286)
.+....++|||||+|.||..+|+.|...|++|++|||+.++.. +.....++.+++++||+|++|+|....++.++
T Consensus 16 ~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~ 95 (310)
T 3doj_A 16 PRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVV 95 (310)
T ss_dssp --CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred cccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHH
Confidence 3455668999999999999999999999999999999877542 34456789999999999999999766777665
Q ss_pred --cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCC
Q 043239 218 --NKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSL 266 (286)
Q Consensus 218 --~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~ 266 (286)
.++.++.+++|.++||+++..+...+.+.+.+.+..+......|+..++
T Consensus 96 ~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~pv~g~~~ 146 (310)
T 3doj_A 96 FDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKK 146 (310)
T ss_dssp HSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHH
T ss_pred hCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCCCCChh
Confidence 2456778999999999999999999999999998877766666665543
No 55
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.48 E-value=5.3e-14 Score=126.85 Aligned_cols=118 Identities=14% Similarity=0.148 Sum_probs=101.1
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHH
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVM 222 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l 222 (286)
.++|||||+|.||..+|+.|...|++|++|||++++.. +.....+++++++ ||+|++|+|....++.++ ++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 36899999999999999999999999999999987653 3445679999999 999999999777777776 6788
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCC
Q 043239 223 TALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLM 267 (286)
Q Consensus 223 ~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~ 267 (286)
+.++++.++||+++..+...+.+.+.+.+..+......|+..++.
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~ 137 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAA 137 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHH
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHH
Confidence 889999999999999999999999999988777666667766543
No 56
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.45 E-value=1.1e-13 Score=128.07 Aligned_cols=124 Identities=13% Similarity=0.190 Sum_probs=104.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC-----CCcccccCHHHhhcCC---CEEEEeccCChhhhhcc
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG-----VSYPFYANVSGLAADS---DVLIVCCALTEETHHMI 217 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~l~e~l~~a---DiV~~~lp~~~~t~~~i 217 (286)
+.+++|||||+|.||..+|+.|...|++|.+|||+.++. .+.....+++++++++ |+|++|+|.. .+..++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 467899999999999999999999999999999987642 2445567899999999 9999999976 777766
Q ss_pred cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCCcCC
Q 043239 218 NKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMCQRS 271 (286)
Q Consensus 218 ~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~~~~ 271 (286)
+..++.+++|.+|||++++...+...+.+.+.+..+......|+..++....+
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G 151 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERG 151 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHC
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcC
Confidence 56788899999999999999999999999999999988888888776544333
No 57
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.45 E-value=1.2e-13 Score=123.70 Aligned_cols=118 Identities=18% Similarity=0.196 Sum_probs=99.9
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhccc--HHH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMIN--KDV 221 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~--~~~ 221 (286)
++|||||+|.||..+|+.|...|++|++|||++++.. +.....++++++++||+|++|+|.....+.++. ++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 6899999999999999999999999999999877543 444567999999999999999997667777662 467
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCC
Q 043239 222 MTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSL 266 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~ 266 (286)
++.+++|.++||+++..+.+.+.+.+.+.+..+......|+..++
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~ 126 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKK 126 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHH
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEECCCcCCHH
Confidence 788999999999999999999999999998877766666665553
No 58
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.42 E-value=6.8e-14 Score=126.43 Aligned_cols=120 Identities=18% Similarity=0.145 Sum_probs=98.9
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cccc-ccCHHHhhcCCCEEEEeccCChhhhhccc--H
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPF-YANVSGLAADSDVLIVCCALTEETHHMIN--K 219 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~-~~~l~e~l~~aDiV~~~lp~~~~t~~~i~--~ 219 (286)
.++|||||+|.||..+|+.|...|++|++|||++++.. +... ..++++++++||+|++|+|.....+.++. +
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 46899999999999999999999999999999876432 3344 67889999999999999997666676653 4
Q ss_pred HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCC
Q 043239 220 DVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLM 267 (286)
Q Consensus 220 ~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~ 267 (286)
+.++.+++|.++||+++..+...+.+.+.+.+..+......|+..++.
T Consensus 87 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~ 134 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVSGGAVK 134 (303)
T ss_dssp CCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHH
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEeCCCCCChhh
Confidence 566789999999999999999999999999988777665666655543
No 59
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.42 E-value=1.2e-13 Score=123.69 Aligned_cols=117 Identities=16% Similarity=0.130 Sum_probs=98.1
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhccc--HHH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMIN--KDV 221 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~--~~~ 221 (286)
++|||||+|.||..+|+.|...|++|++|||++++.. +.....++++++++||+|++|+|..+.++.++. ++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 4799999999999999999999999999999887643 344567999999999999999997667776652 456
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCC
Q 043239 222 MTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTS 265 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e 265 (286)
++.+++|.++||++++.+...+.+.+.+.+..+......|+..+
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~ 125 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTK 125 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCH
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCccCCH
Confidence 77899999999999999999999999998887776555666554
No 60
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.39 E-value=1.3e-12 Score=119.02 Aligned_cols=134 Identities=10% Similarity=-0.003 Sum_probs=96.7
Q ss_pred HHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCC-CEEEEECCCCCCC------------CCcccc
Q 043239 124 SIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFG-CSIAYTSRKKKPG------------VSYPFY 190 (286)
Q Consensus 124 ~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g-~~V~~~~r~~~~~------------~~~~~~ 190 (286)
+++.+.+-..|.+.. ++ . --.++|||||+|.||..+|+.|...| ++|++|||+.+.. .+. .
T Consensus 4 ~~~~~~~~~~~~~~~--~~-~-~M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~ 77 (317)
T 4ezb_A 4 HHHHSSGVDLGTENL--YF-Q-SMMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--E 77 (317)
T ss_dssp -----------CCCH--HH-H-TSCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--E
T ss_pred ccccccccccCcccC--cc-c-ccCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--C
Confidence 344445555666431 11 1 12368999999999999999999999 9999999986311 122 4
Q ss_pred c-CHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCC
Q 043239 191 A-NVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTS 265 (286)
Q Consensus 191 ~-~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e 265 (286)
. ++.+++++||+|++|+|.......+ ++..+.++++.++||+++..+...+.+.+.+.+..+......|+.++
T Consensus 78 ~~s~~e~~~~aDvVi~avp~~~~~~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~ 151 (317)
T 4ezb_A 78 PLDDVAGIACADVVLSLVVGAATKAVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARV 151 (317)
T ss_dssp EESSGGGGGGCSEEEECCCGGGHHHHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCS
T ss_pred CCCHHHHHhcCCEEEEecCCHHHHHHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCc
Confidence 5 7889999999999999976655543 67788899999999999999999999999999877766555677643
No 61
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.36 E-value=5.5e-13 Score=120.12 Aligned_cols=115 Identities=12% Similarity=0.154 Sum_probs=94.7
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcccH--HH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMINK--DV 221 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~--~~ 221 (286)
++|+|||+|.||..+|+.|...|++|++|+|+.++.. +.....++++++++||+|++|+|....++.++.. +.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999999875432 4445678999999999999999977677766641 56
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccC
Q 043239 222 MTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLR 263 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~ 263 (286)
++.++++.++||++++.....+.+.+.+.+..+......++.
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~pv~~ 125 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSG 125 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEECCEES
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEEEccC
Confidence 778999999999999999998999999988766544334443
No 62
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.35 E-value=8.2e-13 Score=126.66 Aligned_cols=120 Identities=11% Similarity=0.118 Sum_probs=101.8
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC--------C--cccccCHHHhhc---CCCEEEEeccCChhhh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV--------S--YPFYANVSGLAA---DSDVLIVCCALTEETH 214 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~--------~--~~~~~~l~e~l~---~aDiV~~~lp~~~~t~ 214 (286)
.++|||||+|.||..+|++|...|++|.+|||+.++.. + .....+++++++ ++|+|++++|..+.++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 46899999999999999999999999999999876421 1 112478888876 5999999999887888
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCCCC
Q 043239 215 HMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSLMC 268 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~~~ 268 (286)
.++ ++..+.|++|.+|||++++...+...+.+.+.+..+......|+..++..
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA 136 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGA 136 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHH
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHH
Confidence 777 57888999999999999999999999999999999988888888766433
No 63
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.31 E-value=2.1e-12 Score=123.93 Aligned_cols=120 Identities=15% Similarity=0.192 Sum_probs=98.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC---------CcccccCHHHhhcC---CCEEEEeccCChhh
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV---------SYPFYANVSGLAAD---SDVLIVCCALTEET 213 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~---------~~~~~~~l~e~l~~---aDiV~~~lp~~~~t 213 (286)
.+.++|||||+|.||+.+|+.|...|++|.+|+|++++.. +.....++++++++ +|+|++++|..+.+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 92 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGT 92 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHH
Confidence 3456899999999999999999999999999999865421 33445788898877 99999999987788
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCC
Q 043239 214 HHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSL 266 (286)
Q Consensus 214 ~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~ 266 (286)
+.++ ++..+.+++|.+|||++.|...+...+.+.+.+..+......|+..+.
T Consensus 93 ~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~ 144 (480)
T 2zyd_A 93 DAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEE 144 (480)
T ss_dssp HHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHH
T ss_pred HHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHh
Confidence 8887 467788999999999999998888899999988777665566665443
No 64
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.29 E-value=1e-13 Score=130.41 Aligned_cols=164 Identities=21% Similarity=0.262 Sum_probs=123.1
Q ss_pred CCccEEEEcCCCCCcCChhHHh-----hcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCC-CCCCC
Q 043239 69 PALEIVVGSTAGIDHVDLQECR-----RRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDH-GAYPL 142 (286)
Q Consensus 69 ~~Lk~i~~~~~G~d~id~~~~~-----~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~-~~~~~ 142 (286)
+.+++|...++|+|++++.+.. ++++.+++.+|. ..+++++.+.+++.+.|++...... ..+.|... .....
T Consensus 80 ~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~~-~~~~~s~a~~av~~ 157 (404)
T 1gpj_A 80 EAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETRI-SEGAVSIGSAAVEL 157 (404)
T ss_dssp HHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSST-TCSCCSHHHHHHHH
T ss_pred hHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhhh-cCCCccHHHHHHHH
Confidence 5688999999999999998887 888999998887 5789999999999999987654322 22333210 00001
Q ss_pred c----ccCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC------Ccc--cccCHHHhhcCCCEEEEeccC
Q 043239 143 G----STLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV------SYP--FYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 143 ~----~~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~------~~~--~~~~l~e~l~~aDiV~~~lp~ 209 (286)
. .++.|++|+|+|+|.||+.+++.++.+|+ +|++++|+.++.. +.. ...++.+++.++|+|+.|+|.
T Consensus 158 a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~ 237 (404)
T 1gpj_A 158 AERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAA 237 (404)
T ss_dssp HHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred HHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCC
Confidence 1 14789999999999999999999999999 9999999875421 221 235778888999999999874
Q ss_pred ChhhhhcccHHHHhc--C----CCCcEEEEcCCC
Q 043239 210 TEETHHMINKDVMTA--L----GKEGVIINVGRG 237 (286)
Q Consensus 210 ~~~t~~~i~~~~l~~--m----k~g~ilvn~srg 237 (286)
+ ..+++++.+.. | +++.++||++..
T Consensus 238 ~---~~~~~~~~l~~~~lk~r~~~~~v~vdia~P 268 (404)
T 1gpj_A 238 P---HPVIHVDDVREALRKRDRRSPILIIDIANP 268 (404)
T ss_dssp S---SCCBCHHHHHHHHHHCSSCCCEEEEECCSS
T ss_pred C---CceecHHHHHHHHHhccCCCCEEEEEccCC
Confidence 3 55677777776 4 356788998753
No 65
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.27 E-value=7.4e-12 Score=120.62 Aligned_cols=117 Identities=13% Similarity=0.175 Sum_probs=97.5
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC----------CCcccccCHHHhhcC---CCEEEEeccCChhhhh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG----------VSYPFYANVSGLAAD---SDVLIVCCALTEETHH 215 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~----------~~~~~~~~l~e~l~~---aDiV~~~lp~~~~t~~ 215 (286)
.+|||||+|.||+.+|+.|...|++|.+|+|++++. .+.....+++++++. +|+|++++|..+.++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~ 90 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDA 90 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHHH
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHHH
Confidence 489999999999999999999999999999987542 123345788898877 9999999998778888
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCC
Q 043239 216 MINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSL 266 (286)
Q Consensus 216 ~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~ 266 (286)
++ ++..+.+++|.+|||++.+...+...+.+.+.+..+......|+..+.
T Consensus 91 vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~ 140 (497)
T 2p4q_A 91 LI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEE 140 (497)
T ss_dssp HH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHH
T ss_pred HH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChh
Confidence 77 567788999999999999998888999999988777665556666553
No 66
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.25 E-value=1.8e-11 Score=111.32 Aligned_cols=117 Identities=17% Similarity=0.134 Sum_probs=88.0
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCC-----Cc--ccccCHHH-hhcCCCEEEEeccCChhhh
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGV-----SY--PFYANVSG-LAADSDVLIVCCALTEETH 214 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~-----~~--~~~~~l~e-~l~~aDiV~~~lp~~~~t~ 214 (286)
+...++|||||+|.||+++|+.|+..|+ +|++|||+.+... +. ....++++ ++++||+|++|+|.. .+.
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~-~~~ 108 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFR 108 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGG-GHH
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHH-HHH
Confidence 3456899999999999999999999999 9999999875421 22 23467888 899999999999965 344
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCC
Q 043239 215 HMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTS 265 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e 265 (286)
.++ ++..+.++++++++|++.......+++.+.+.. ++.+ +-.++..|
T Consensus 109 ~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~-~hPm~G~e 156 (314)
T 3ggo_A 109 EIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVG-GHPIAGTE 156 (314)
T ss_dssp HHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEEC-EEECCCCC
T ss_pred HHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC-CEEe-cCcccCCc
Confidence 444 567788999999999987765556677776654 3322 24566555
No 67
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.24 E-value=8.1e-12 Score=110.56 Aligned_cols=177 Identities=15% Similarity=0.153 Sum_probs=121.4
Q ss_pred CCCchHHHHhccCCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHHHH
Q 043239 35 ADSTHSFLSRHASSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVVGL 114 (286)
Q Consensus 35 ~~~~~~~~~~~~~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l~~ 114 (286)
++++.+.+......+.++.+ +.+++++++..+++++-++....|+|.++. +.|-.+ ++|... .++
T Consensus 40 ~~~l~~~i~~l~~~~~G~~v--t~P~k~~i~~~~~~l~~~a~~~gavn~i~~----~~g~~~----g~ntd~-----~g~ 104 (263)
T 2d5c_A 40 LEALPGRLKEVRRAFRGVNL--TLPLKEAALAHLDWVSPEAQRIGAVNTVLQ----VEGRLF----GFNTDA-----PGF 104 (263)
T ss_dssp GGGHHHHHHHHHHHCSEEEE--CTTCTTGGGGGCSEECHHHHHHTCCCEEEE----ETTEEE----EECCHH-----HHH
T ss_pred HHHHHHHHHhccccCceEEE--cccCHHHHHHHHHHHhHHHHHhCCCCcEEc----cCCeEE----EeCCCH-----HHH
Confidence 34445554443222455555 356788899999999988889999999865 334222 233322 244
Q ss_pred HHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------Ccc
Q 043239 115 LVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------SYP 188 (286)
Q Consensus 115 ~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~~~ 188 (286)
+.++.|. +.++.| +++|||+|.||+++++.|...|++|.+++|+.++.. +..
T Consensus 105 ~~~l~~~---------------------~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~ 162 (263)
T 2d5c_A 105 LEALKAG---------------------GIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR 162 (263)
T ss_dssp HHHHHHT---------------------TCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE
T ss_pred HHHHHHh---------------------CCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc
Confidence 4443321 225788 999999999999999999999999999999865422 112
Q ss_pred cccCHHHhhcCCCEEEEeccCCh--hhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 189 FYANVSGLAADSDVLIVCCALTE--ETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 189 ~~~~l~e~l~~aDiV~~~lp~~~--~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
..+++++ +++|+|++|+|... .+...+. .+.+++|.+++|++.+. .++ .+.+++++..+.
T Consensus 163 -~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~---~~~l~~g~~viD~~~~p-~~t-~l~~~a~~~g~~ 224 (263)
T 2d5c_A 163 -AVPLEKA-REARLLVNATRVGLEDPSASPLP---AELFPEEGAAVDLVYRP-LWT-RFLREAKAKGLK 224 (263)
T ss_dssp -ECCGGGG-GGCSEEEECSSTTTTCTTCCSSC---GGGSCSSSEEEESCCSS-SSC-HHHHHHHHTTCE
T ss_pred -hhhHhhc-cCCCEEEEccCCCCCCCCCCCCC---HHHcCCCCEEEEeecCC-ccc-HHHHHHHHCcCE
Confidence 4577888 99999999999763 2223443 46689999999999874 344 477877776554
No 68
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.24 E-value=4.6e-12 Score=113.58 Aligned_cols=115 Identities=18% Similarity=0.258 Sum_probs=91.9
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhccc--HHH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMIN--KDV 221 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~--~~~ 221 (286)
++|+|||+|.||..+++.|...|++|.+|+|+.+... +.....+++++++++|+|++|+|.......++. ++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 5899999999999999999999999999999865421 344457888999999999999997666666663 356
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccC
Q 043239 222 MTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLR 263 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~ 263 (286)
.+.++++.++||+++|...+.+.+.+.+.+..+......++.
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~ 127 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSG 127 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEES
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCC
Confidence 677899999999999988788899999987655543333343
No 69
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.23 E-value=1.4e-11 Score=110.03 Aligned_cols=108 Identities=15% Similarity=0.168 Sum_probs=88.1
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcccH--HH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMINK--DV 221 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~--~~ 221 (286)
++|+|||+|.||+.+|+.|...|++|.+|+ +.+... +.....+++++++++|+|++|+|....+..++.. +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 589999999999999999999999999999 765532 3344578899999999999999976666666532 45
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEE
Q 043239 222 MTALGKEGVIINVGRGALIDEKELVHFLVRGSLVEL 257 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga 257 (286)
.+.++++.++|+++++...+.+.+.+.+.+..+...
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 118 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYL 118 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 567899999999999988888899999987655533
No 70
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.21 E-value=8.4e-11 Score=105.93 Aligned_cols=108 Identities=18% Similarity=0.178 Sum_probs=77.2
Q ss_pred HHHHHHHcCCCCCCCCCCCcccCCCCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCE
Q 043239 124 SIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDV 202 (286)
Q Consensus 124 ~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDi 202 (286)
++..+++...|.... + ..++|+||| +|.||+.+|+.|+..|++|.+++|+.+ .+..+++++||+
T Consensus 4 ~~~~~~~~~~~~~~~--~-----~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~--------~~~~~~~~~aDv 68 (298)
T 2pv7_A 4 ESYANENQFGFKTIN--S-----DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW--------AVAESILANADV 68 (298)
T ss_dssp ---------CCCCSC--T-----TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG--------GGHHHHHTTCSE
T ss_pred hHHhhhhccCccccC--C-----CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc--------cCHHHHhcCCCE
Confidence 444566677786421 1 246899999 999999999999999999999998753 267788999999
Q ss_pred EEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHH
Q 043239 203 LIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHF 248 (286)
Q Consensus 203 V~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~a 248 (286)
|++|+|.. .+..++ ++..+.++++++++|+++......+.+.+.
T Consensus 69 Vilavp~~-~~~~vl-~~l~~~l~~~~iv~~~~svk~~~~~~~~~~ 112 (298)
T 2pv7_A 69 VIVSVPIN-LTLETI-ERLKPYLTENMLLADLTSVKREPLAKMLEV 112 (298)
T ss_dssp EEECSCGG-GHHHHH-HHHGGGCCTTSEEEECCSCCHHHHHHHHHH
T ss_pred EEEeCCHH-HHHHHH-HHHHhhcCCCcEEEECCCCCcHHHHHHHHh
Confidence 99999954 466666 356677999999999987765444555444
No 71
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.21 E-value=1.3e-11 Score=110.77 Aligned_cols=109 Identities=17% Similarity=0.221 Sum_probs=89.8
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC-----CCcccccCHHHhhcCCCEEEEeccCChhhhhccc--HHH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG-----VSYPFYANVSGLAADSDVLIVCCALTEETHHMIN--KDV 221 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~--~~~ 221 (286)
++|+|||+|.||+.+++.|...|++|.+|+|+++.. .+.....+++++++++|+|++|+|....++.++. ++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 689999999999999999999999999999976532 1344456888999999999999997766777764 356
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEE
Q 043239 222 MTALGKEGVIINVGRGALIDEKELVHFLVRGSLVEL 257 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga 257 (286)
.+.++++.++|++++|...+.+.+.+.+.+..+...
T Consensus 85 ~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~ 120 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYV 120 (301)
T ss_dssp HHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 678899999999999987788889998887655443
No 72
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.20 E-value=3.5e-11 Score=107.04 Aligned_cols=133 Identities=14% Similarity=0.080 Sum_probs=93.4
Q ss_pred CEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCC-----Ccc--cccCHHHhhc-CCCEEEEeccCChhhhhccc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGV-----SYP--FYANVSGLAA-DSDVLIVCCALTEETHHMIN 218 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~-----~~~--~~~~l~e~l~-~aDiV~~~lp~~~~t~~~i~ 218 (286)
++|+|||+|.||+.+|+.|...|+ +|++++|+.+... +.. ...+++++++ +||+|++|+|.. .+..++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~ 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIAK 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHHH
Confidence 589999999999999999999998 9999999765321 222 2457888899 999999999954 4555553
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCC---CCcCCcc-cc-cccccccccC
Q 043239 219 KDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTSL---MCQRSCL-HW-IMLCCLHMLL 285 (286)
Q Consensus 219 ~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~---~~~~~~l-~~-~~~~tph~~~ 285 (286)
+..+.++++.+++|++++.....+.+.+.+.++ +-+ ...++..+. ......+ .. ..+++||.++
T Consensus 81 -~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~-~v~-~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~ 149 (281)
T 2g5c_A 81 -KLSYILSEDATVTDQGSVKGKLVYDLENILGKR-FVG-GHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKT 149 (281)
T ss_dssp -HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGG-EEC-EEEECCCSCCSGGGCCSSTTTTCEEEECCCSSS
T ss_pred -HHHhhCCCCcEEEECCCCcHHHHHHHHHhcccc-cee-eccccCCccCChhhhhhHHhCCCCEEEecCCCC
Confidence 566779999999999988876677788888764 211 134444432 1111111 22 2488888653
No 73
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.19 E-value=1.4e-10 Score=108.53 Aligned_cols=97 Identities=15% Similarity=0.307 Sum_probs=79.1
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Ccc-----------------c------------c
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYP-----------------F------------Y 190 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~-----------------~------------~ 190 (286)
.+.+.+|+|+|+|.||..+++.++++|++|+++|++..... +.. . .
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence 47899999999999999999999999999999999875411 111 0 1
Q ss_pred cCHHHhhcCCCEEEEec--cCChhhhhcccHHHHhcCCCCcEEEEcC--CCcccCH
Q 043239 191 ANVSGLAADSDVLIVCC--ALTEETHHMINKDVMTALGKEGVIINVG--RGALIDE 242 (286)
Q Consensus 191 ~~l~e~l~~aDiV~~~l--p~~~~t~~~i~~~~l~~mk~g~ilvn~s--rg~~vd~ 242 (286)
.++.++++++|+|+.++ |.. ....+++++.++.||+|++|||+| +|+.++.
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~ 321 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNIEG 321 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTT
T ss_pred hHHHHHhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCccc
Confidence 26788899999999885 533 356788999999999999999999 8877654
No 74
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.18 E-value=4.1e-11 Score=115.06 Aligned_cols=116 Identities=11% Similarity=0.138 Sum_probs=95.0
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC----------CCcccccCHHHhhc---CCCEEEEeccCChhhhh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG----------VSYPFYANVSGLAA---DSDVLIVCCALTEETHH 215 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~----------~~~~~~~~l~e~l~---~aDiV~~~lp~~~~t~~ 215 (286)
++|||||+|.||+.+|..|...|++|.+|+|+.++. .+.....+++++++ ++|+|++++|....+..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 579999999999999999999999999999986532 22334568888874 89999999997777777
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCC
Q 043239 216 MINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTS 265 (286)
Q Consensus 216 ~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e 265 (286)
++ ++..+.+++|.+|||++.|...+...+.+.+.+..+......|+..+
T Consensus 83 vl-~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~ 131 (482)
T 2pgd_A 83 FI-EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGE 131 (482)
T ss_dssp HH-HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHH
T ss_pred HH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCCh
Confidence 77 46778899999999999999888888888898876666666666554
No 75
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.18 E-value=2.4e-11 Score=109.94 Aligned_cols=115 Identities=15% Similarity=0.235 Sum_probs=90.6
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcccH--HH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMINK--DV 221 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~--~~ 221 (286)
++|+|||+|.||..+|+.|...|++|.+|+|+.+... +.....++.++++++|+|++|+|....+..++.. ..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999999876532 3334568889999999999999976666665533 23
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccC
Q 043239 222 MTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLR 263 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~ 263 (286)
++.++++.++||++++.....+.+.+.+....+......++.
T Consensus 111 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g 152 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSG 152 (316)
T ss_dssp GGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEES
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccC
Confidence 567899999999999888788888998876555544334443
No 76
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.18 E-value=9.3e-12 Score=109.09 Aligned_cols=93 Identities=14% Similarity=0.280 Sum_probs=68.0
Q ss_pred CcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCC--------------C------CCcccccCHHHhhcCCC
Q 043239 142 LGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKP--------------G------VSYPFYANVSGLAADSD 201 (286)
Q Consensus 142 ~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~--------------~------~~~~~~~~l~e~l~~aD 201 (286)
...++.+++|||||+|.||+.+|+.|...|++|++|+|++++ . .+.....++.+++++||
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD 92 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAE 92 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCS
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCC
Confidence 456799999999999999999999999999999999998764 0 02233567889999999
Q ss_pred EEEEeccCChhhhhcccHHH-HhcCCCCcEEEEcCCC
Q 043239 202 VLIVCCALTEETHHMINKDV-MTALGKEGVIINVGRG 237 (286)
Q Consensus 202 iV~~~lp~~~~t~~~i~~~~-l~~mk~g~ilvn~srg 237 (286)
+|++|+|..... ..+. +. .+.+ ++.++||++.|
T Consensus 93 vVilavp~~~~~-~~~~-~i~~~~l-~g~ivi~~s~~ 126 (245)
T 3dtt_A 93 LVVNATEGASSI-AALT-AAGAENL-AGKILVDIANP 126 (245)
T ss_dssp EEEECSCGGGHH-HHHH-HHCHHHH-TTSEEEECCCC
T ss_pred EEEEccCcHHHH-HHHH-Hhhhhhc-CCCEEEECCCC
Confidence 999999965443 3332 23 3344 79999999943
No 77
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.18 E-value=2.1e-11 Score=116.86 Aligned_cols=116 Identities=15% Similarity=0.199 Sum_probs=95.6
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC---------CcccccCHHHhhcC---CCEEEEeccCChhhhhc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV---------SYPFYANVSGLAAD---SDVLIVCCALTEETHHM 216 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~---------~~~~~~~l~e~l~~---aDiV~~~lp~~~~t~~~ 216 (286)
++|||||+|.||+.+|+.|...|++|.+|+|+.++.. +.....++++++++ +|+|++|+|....+..+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 5899999999999999999999999999999865421 23345788898876 99999999987777777
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCC
Q 043239 217 INKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTS 265 (286)
Q Consensus 217 i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e 265 (286)
+ ++..+.+++|.+|||++.+...+...+.+.+.+..+......|+..+
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~ 133 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGE 133 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHH
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCCh
Confidence 7 46778899999999999998888888999888766766666666544
No 78
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.17 E-value=2.2e-11 Score=108.98 Aligned_cols=106 Identities=17% Similarity=0.229 Sum_probs=84.8
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC-----CCcccccCHHHhhcCCCEEEEeccCChhhhhcccH--HH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG-----VSYPFYANVSGLAADSDVLIVCCALTEETHHMINK--DV 221 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~--~~ 221 (286)
++|+|||+|.||+.+|+.|...|++|.+|+|+.++. .+.....+++++++++|+|++|+|....++.++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 479999999999999999999999999999987542 23444568889999999999999977677766543 24
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCe
Q 043239 222 MTALGKEGVIINVGRGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i 254 (286)
++.++++.++|+++..++.+...+.+.+.+...
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~ 113 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGA 113 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 567899999999888887777778777776433
No 79
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.16 E-value=2.8e-11 Score=116.08 Aligned_cols=116 Identities=18% Similarity=0.271 Sum_probs=94.6
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------C-------cccccCHHHhhc---CCCEEEEeccCChh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------S-------YPFYANVSGLAA---DSDVLIVCCALTEE 212 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~-------~~~~~~l~e~l~---~aDiV~~~lp~~~~ 212 (286)
++|||||+|.||+.+|+.|...|++|.+|+|+.++.. + .....+++++++ .+|+|++++|....
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 4799999999999999999999999999999765321 2 234568888877 49999999998777
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCC
Q 043239 213 THHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTS 265 (286)
Q Consensus 213 t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e 265 (286)
++.++ ++..+.+++|.+|||++.|...+...+.+.+.+..+......|+..+
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~ 133 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGE 133 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHH
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCH
Confidence 77777 46777899999999999998888888999998876766556666554
No 80
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.15 E-value=3.5e-11 Score=107.11 Aligned_cols=104 Identities=16% Similarity=0.203 Sum_probs=84.6
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMT 223 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~ 223 (286)
++|+|||+|.||..+|+.|.. |++|.+|+|+.++.. +..... ++++++++|+|++|+|....+..++ ++..+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~ 78 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVA-EALYP 78 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHH-HHHTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHH-HHHHh
Confidence 479999999999999999999 999999999875432 222233 6778889999999999665566655 45667
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 224 ALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 224 ~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
.++++.++||++++...+.+.+.+.+.+..+.
T Consensus 79 ~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 110 (289)
T 2cvz_A 79 YLREGTYWVDATSGEPEASRRLAERLREKGVT 110 (289)
T ss_dssp TCCTTEEEEECSCCCHHHHHHHHHHHHTTTEE
T ss_pred hCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 88999999999999888889999999876554
No 81
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.15 E-value=1.3e-11 Score=110.09 Aligned_cols=179 Identities=14% Similarity=0.198 Sum_probs=118.8
Q ss_pred CCCCchHHHHhcc-CCceEEEEeCCCCCCHHHhccCCCccEEEEcCCCCCcCChhHHhhcCeEEEecCCCCCcChHHHHH
Q 043239 34 SADSTHSFLSRHA-SSVRAILCLGPSPLTSDTLSLLPALEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGADYVV 112 (286)
Q Consensus 34 ~~~~~~~~~~~~~-~~~d~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~l 112 (286)
.++++.+.+.... .+.+++.+. .+..++++..++.+.-.+....++|.++. +.|-.+ ++|... .
T Consensus 50 ~~~~l~~~i~~l~~~~~~G~nvt--iP~k~~i~~~ld~l~~~A~~~gavnti~~----~~g~~~----g~nTd~-----~ 114 (275)
T 2hk9_A 50 NPEELKKAFEGFKALKVKGINVT--VPFKEEIIPLLDYVEDTAKEIGAVNTVKF----ENGKAY----GYNTDW-----I 114 (275)
T ss_dssp CGGGHHHHHHHHHHHTCCEEEEC--TTSTTTTGGGCSEECHHHHHHTCCCEEEE----ETTEEE----EECCHH-----H
T ss_pred CHHHHHHHHHHHHhCCCCEEEEC--ccCHHHHHHHHHHhhHHHHHhCCcceEEe----eCCEEE----eecCCH-----H
Confidence 3444555554321 256788773 56677888888888877777788887754 334222 233322 2
Q ss_pred HHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------C
Q 043239 113 GLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------S 186 (286)
Q Consensus 113 ~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~ 186 (286)
+++.++.+. +.++.|++++|||+|.||+++++.|...|++|++++|+.++.. +
T Consensus 115 G~~~~l~~~---------------------~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g 173 (275)
T 2hk9_A 115 GFLKSLKSL---------------------IPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFP 173 (275)
T ss_dssp HHHHHHHHH---------------------CTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSC
T ss_pred HHHHHHHHh---------------------CCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcC
Confidence 444443321 1246789999999999999999999999999999999864321 2
Q ss_pred cccccCHHHhhcCCCEEEEeccCChh--hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 187 YPFYANVSGLAADSDVLIVCCALTEE--THHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 187 ~~~~~~l~e~l~~aDiV~~~lp~~~~--t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
.....++.++++++|+|++++|.... +...++ ++.++++.+++|++. . ...+++..++.++.
T Consensus 174 ~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i~---~~~l~~g~~viDv~~---~-~t~ll~~a~~~g~~ 237 (275)
T 2hk9_A 174 LEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFN---YDLIKKDHVVVDIIY---K-ETKLLKKAKEKGAK 237 (275)
T ss_dssp EEECSCGGGTGGGCSEEEECSSTTSSTTCCCSSC---GGGCCTTSEEEESSS---S-CCHHHHHHHHTTCE
T ss_pred CeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCCC---HHHcCCCCEEEEcCC---C-hHHHHHHHHHCcCE
Confidence 22334788889999999999996642 222343 456899999999988 2 33355555554443
No 82
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.12 E-value=1e-10 Score=104.59 Aligned_cols=112 Identities=14% Similarity=0.159 Sum_probs=87.2
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCC------------------------------cccccCHHHhhc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVS------------------------------YPFYANVSGLAA 198 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~------------------------------~~~~~~l~e~l~ 198 (286)
++|+|||+|.||..+|+.+...|++|++||++.+.... .....+++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 68999999999999999999999999999998753210 123468888999
Q ss_pred CCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccC
Q 043239 199 DSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLR 263 (286)
Q Consensus 199 ~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~ 263 (286)
+||+|+.++|.+.+....+.++..+.+++++++++.+.+ +....+.+++.. .-+.+++..+.
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~-~~~~ig~h~~~ 146 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGR-GDKFLALHFAN 146 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSC-GGGEEEEEECS
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCC-CcceEEEccCC
Confidence 999999999988766666667788889999999965444 356677777754 33456677664
No 83
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.11 E-value=1e-10 Score=107.70 Aligned_cols=103 Identities=18% Similarity=0.315 Sum_probs=86.2
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC-----CCcccccCHHHhhc-CCCEEEEeccCChhhhhccc
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG-----VSYPFYANVSGLAA-DSDVLIVCCALTEETHHMIN 218 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~l~e~l~-~aDiV~~~lp~~~~t~~~i~ 218 (286)
++.|++|+|+|+|++|+.+|++++.+|++|+++|++.... .+.. ..+.++++. +||+++-| ++.++|+
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~-~v~~~ell~~~~DIliP~-----A~~~~I~ 245 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHT-AVALEDVLSTPCDVFAPC-----AMGGVIT 245 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCGGGGGGCCCSEEEEC-----SCSCCBC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCE-EeChHHhhcCccceecHh-----HHHhhcC
Confidence 6899999999999999999999999999999999764321 1222 336778887 89999754 4788999
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 219 KDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 219 ~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
++.++.|| ..+++|.+++.++++++ .++|+++++.
T Consensus 246 ~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl 280 (355)
T 1c1d_A 246 TEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL 280 (355)
T ss_dssp HHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE
T ss_pred HHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE
Confidence 99999998 68999999999999777 6999999875
No 84
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.10 E-value=8.5e-11 Score=109.10 Aligned_cols=220 Identities=10% Similarity=0.051 Sum_probs=129.0
Q ss_pred hcccCCCCCCchhhhC-CCcEEecCCCCC----CCchHHHH------hccCCceEEEEeCCCCCCHHHhccCCC-ccEEE
Q 043239 8 AYRRGAPGCFNPPLSE-RFTLLDPLLHSA----DSTHSFLS------RHASSVRAILCLGPSPLTSDTLSLLPA-LEIVV 75 (286)
Q Consensus 8 ~~~~~~~~~~~~~l~~-~~~~~~~~~~~~----~~~~~~~~------~~~~~~d~i~~~~~~~~~~~~l~~~~~-Lk~i~ 75 (286)
-.|-.+.|...+.|.+ .+++ .+....+ -+-+++.+ +.++ +|+|+.- ...+++.++.+.. -.++.
T Consensus 35 E~RValtP~~v~~L~~~G~~V-~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~-adiIlkV--k~p~~~e~~~l~~g~~l~~ 110 (381)
T 3p2y_A 35 ERRVALVPKVVEKLSARGLEV-VVESAAGAGALFSDADYERAGATIGDPWP-ADVVVKV--NPPTSDEISQLKPGSVLIG 110 (381)
T ss_dssp CCCCSSCHHHHHHHHHTTCEE-EECTTTTGGGTCCHHHHHHTTCEESCCTT-SSEEECS--SCCCHHHHTTSCTTCEEEE
T ss_pred CceecCCHHHHHHHHhCCCEE-EEeCCCCccCCCChHHHHHCCCEEeeeec-CCEEEEe--CCCChhHHhhccCCCEEEE
Confidence 4455666666777765 4444 3443322 11133322 1222 6777642 2345666666654 34444
Q ss_pred EcCCCCCcCChhHHhhcCeEEEec---CCCC-Cc------ChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCccc
Q 043239 76 GSTAGIDHVDLQECRRRGILVTNA---GNAF-SE------DGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGST 145 (286)
Q Consensus 76 ~~~~G~d~id~~~~~~~gI~v~n~---~~~~-~~------~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~ 145 (286)
..-.-.|.=-+..+.++||+..-. |... +. +++|.+ .++-....... -+....- .......
T Consensus 111 ~lh~~~~~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iA------Gy~Av~~aa~~--l~~~~~~-l~~~~~~ 181 (381)
T 3p2y_A 111 FLAPRTQPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVA------GYKAVLLGASL--STRFVPM-LTTAAGT 181 (381)
T ss_dssp CCCTTTCHHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHH------HHHHHHHHHHH--CSSCSSC-EECSSCE
T ss_pred EeccccCHHHHHHHHHCCCeEEEeeccccccccccceeecchhHHH------HHHHHHHHHHH--hhhhhhh-hhcccCC
Confidence 333333322346788999998642 3211 11 122221 11111111111 1111100 0001235
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Ccc-------------------------cccCHHH
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYP-------------------------FYANVSG 195 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~-------------------------~~~~l~e 195 (286)
+.+++|+|+|+|.||..+|+.++++|++|+++|++..+.. +.. ...++.+
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 7899999999999999999999999999999999875421 111 0135778
Q ss_pred hhcCCCEEEEec--cCChhhhhcccHHHHhcCCCCcEEEEcC--CCcccC
Q 043239 196 LAADSDVLIVCC--ALTEETHHMINKDVMTALGKEGVIINVG--RGALID 241 (286)
Q Consensus 196 ~l~~aDiV~~~l--p~~~~t~~~i~~~~l~~mk~g~ilvn~s--rg~~vd 241 (286)
.++++|+|+.++ |. ..+..+++++.++.||+|++|||+| +|+.+.
T Consensus 262 ~l~~aDIVI~tv~iPg-~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e 310 (381)
T 3p2y_A 262 AITKFDIVITTALVPG-RPAPRLVTAAAATGMQPGSVVVDLAGETGGNCE 310 (381)
T ss_dssp HHTTCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBT
T ss_pred HHhcCCEEEECCCCCC-cccceeecHHHHhcCCCCcEEEEEeCCCCCccc
Confidence 999999999875 53 2356688999999999999999998 777665
No 85
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.08 E-value=5.1e-11 Score=109.53 Aligned_cols=130 Identities=12% Similarity=0.100 Sum_probs=86.9
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcC----CCEEEEeccCChhhhhccc
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAAD----SDVLIVCCALTEETHHMIN 218 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~----aDiV~~~lp~~~~t~~~i~ 218 (286)
-++|||||+|.||+++|+.|+..|++|++|||+++... +.....++++++++ ||+|++|+|. ..+..++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl- 85 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLL- 85 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHH-
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHH-
Confidence 35799999999999999999999999999999875422 33445688887764 7999999994 4566666
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEE-eeccCCC-CCC--cCCcccc--ccccccc
Q 043239 219 KDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELV-LMCLRTS-LMC--QRSCLHW--IMLCCLH 282 (286)
Q Consensus 219 ~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~-lDv~~~e-~~~--~~~~l~~--~~~~tph 282 (286)
++... ++++++++|++..+....+++.+.+. ..+..+ -.++..| ..+ ....|.. ..++||+
T Consensus 86 ~~l~~-~~~~~iv~Dv~Svk~~i~~~~~~~~~--~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~ 152 (341)
T 3ktd_A 86 DAVHT-HAPNNGFTDVVSVKTAVYDAVKARNM--QHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFD 152 (341)
T ss_dssp HHHHH-HCTTCCEEECCSCSHHHHHHHHHTTC--GGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCG
T ss_pred HHHHc-cCCCCEEEEcCCCChHHHHHHHHhCC--CCcEecCCccccccccchhhhhhHHhcCCeEEEEeC
Confidence 33434 58999999998766443444444432 122222 4666655 222 1222221 3488886
No 86
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.07 E-value=1.7e-10 Score=103.03 Aligned_cols=102 Identities=23% Similarity=0.237 Sum_probs=79.5
Q ss_pred CCEEEEEcCChHHHHHHHHhccC--CCEEEEECCCCCCCC-----Cc--ccccCHHHhhcCCCEEEEeccCChhhhhccc
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPF--GCSIAYTSRKKKPGV-----SY--PFYANVSGLAADSDVLIVCCALTEETHHMIN 218 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~--g~~V~~~~r~~~~~~-----~~--~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~ 218 (286)
-++|+|||+|.||+.+|+.|... |++|++++++.+... +. ....+++++++++|+|++|+|.. ....++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~- 83 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIK-KTIDFI- 83 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHH-HHHHHH-
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHH-HHHHHH-
Confidence 36899999999999999999876 679999999765321 22 13457778889999999999954 335555
Q ss_pred HHHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHh
Q 043239 219 KDVMTA-LGKEGVIINVGRGALIDEKELVHFLVR 251 (286)
Q Consensus 219 ~~~l~~-mk~g~ilvn~srg~~vd~~al~~al~~ 251 (286)
++..+. ++++.+++|+++......+.+.+.+.+
T Consensus 84 ~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~ 117 (290)
T 3b1f_A 84 KILADLDLKEDVIITDAGSTKYEIVRAAEYYLKD 117 (290)
T ss_dssp HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTT
T ss_pred HHHHhcCCCCCCEEEECCCCchHHHHHHHHhccc
Confidence 346677 899999999998877667788888775
No 87
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.05 E-value=1.7e-10 Score=101.56 Aligned_cols=98 Identities=12% Similarity=0.156 Sum_probs=77.5
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCC--CCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRK--KKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~--~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
++|+|||+|.||..+|+.|...|++|+++++. .+... +.. .+++++++++|+|++|+|.......+ .+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~ 76 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAA--RRA 76 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHH--HHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHH--HHH
Confidence 48999999999999999999999999998873 21111 222 67788899999999999976555543 456
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 222 MTALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
.+.+++ ++||++.+.+.+.+.+.+.+.+.
T Consensus 77 ~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 77 GRHVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp HTTCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred HHhcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 677877 99999988887788888888764
No 88
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.01 E-value=4.1e-10 Score=107.41 Aligned_cols=142 Identities=15% Similarity=0.198 Sum_probs=97.7
Q ss_pred cCCCCCcCC-hhHHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEc
Q 043239 77 STAGIDHVD-LQECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVG 155 (286)
Q Consensus 77 ~~~G~d~id-~~~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG 155 (286)
+++|+..+- .....+..|++.|..+ ++..+.+-........+.... ++. .+.++.|++++|+|
T Consensus 209 TttGv~rL~~~~~~g~L~iPvinvnD----s~tK~~fDn~yGt~~sl~dgi--~r~----------tg~~L~GKtVvVtG 272 (488)
T 3ond_A 209 TTTGVKRLYQMQANGTLLFPAINVND----SVTKSKFDNLYGCRHSLPDGL--MRA----------TDVMIAGKVAVVAG 272 (488)
T ss_dssp SHHHHHHHHHHHHTTCCCSCEEECTT----SHHHHTTHHHHHHHHHHHHHH--HHH----------HCCCCTTCEEEEEC
T ss_pred ccccHHHHHHHHHcCCCCCceecccc----hhhhhHhhhhccccHHHHHHH--HHH----------cCCcccCCEEEEEC
Confidence 456666542 1223356799999866 444432222222222111111 111 23458999999999
Q ss_pred CChHHHHHHHHhccCCCEEEEECCCCCCCC----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEE
Q 043239 156 LGSIGSEVAKRLVPFGCSIAYTSRKKKPGV----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVI 231 (286)
Q Consensus 156 ~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~il 231 (286)
+|.||+.+|++|+++|++|+++++++.... ......++++++..+|+|+.+. .+.++++.+.+..||+++++
T Consensus 273 aGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~at----G~~~vl~~e~l~~mk~gaiV 348 (488)
T 3ond_A 273 YGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTT----GNKDIIMLDHMKKMKNNAIV 348 (488)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECS----SCSCSBCHHHHTTSCTTEEE
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCC----CChhhhhHHHHHhcCCCeEE
Confidence 999999999999999999999998764321 1123467889999999998764 35678888899999999999
Q ss_pred EEcCCCc
Q 043239 232 INVGRGA 238 (286)
Q Consensus 232 vn~srg~ 238 (286)
+|+|++.
T Consensus 349 vNaG~~~ 355 (488)
T 3ond_A 349 CNIGHFD 355 (488)
T ss_dssp EESSSTT
T ss_pred EEcCCCC
Confidence 9999983
No 89
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.00 E-value=2.7e-10 Score=104.55 Aligned_cols=89 Identities=20% Similarity=0.261 Sum_probs=72.0
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC------CCcccccCHHHhhcCCCEEEEeccCChhhhhccc
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG------VSYPFYANVSGLAADSDVLIVCCALTEETHHMIN 218 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~------~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~ 218 (286)
.+.+++|+|||+|.||+++|+.|+..|++|++++++.+.. .+.... ++++++++||+|++|+|... ...++.
T Consensus 13 ~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~~-~~~v~~ 90 (338)
T 1np3_A 13 IIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDEF-QGRLYK 90 (338)
T ss_dssp HHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHHH-HHHHHH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcHH-HHHHHH
Confidence 4788999999999999999999999999999999986541 133333 88899999999999999543 355554
Q ss_pred HHHHhcCCCCcEEEEcC
Q 043239 219 KDVMTALGKEGVIINVG 235 (286)
Q Consensus 219 ~~~l~~mk~g~ilvn~s 235 (286)
++..+.+++++++++++
T Consensus 91 ~~i~~~l~~~~ivi~~~ 107 (338)
T 1np3_A 91 EEIEPNLKKGATLAFAH 107 (338)
T ss_dssp HHTGGGCCTTCEEEESC
T ss_pred HHHHhhCCCCCEEEEcC
Confidence 46667899999999884
No 90
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.99 E-value=7.2e-10 Score=94.77 Aligned_cols=79 Identities=14% Similarity=0.299 Sum_probs=63.4
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhc
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTA 224 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~ 224 (286)
++.+++|+|||+|.||+.+|+.|...|++|++++|+.+ .+++||+|++++| .+.+..++. +..+.
T Consensus 16 ~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-------------~~~~aD~vi~av~-~~~~~~v~~-~l~~~ 80 (209)
T 2raf_A 16 YFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-------------ATTLGEIVIMAVP-YPALAALAK-QYATQ 80 (209)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-------------CSSCCSEEEECSC-HHHHHHHHH-HTHHH
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-------------HhccCCEEEEcCC-cHHHHHHHH-HHHHh
Confidence 47788999999999999999999999999999998754 5678999999999 566666653 34456
Q ss_pred CCCCcEEEEcCCCcc
Q 043239 225 LGKEGVIINVGRGAL 239 (286)
Q Consensus 225 mk~g~ilvn~srg~~ 239 (286)
++ +.++|++++|-.
T Consensus 81 ~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 81 LK-GKIVVDITNPLN 94 (209)
T ss_dssp HT-TSEEEECCCCBC
T ss_pred cC-CCEEEEECCCCC
Confidence 77 999999999754
No 91
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.54 E-value=4.5e-11 Score=101.89 Aligned_cols=90 Identities=20% Similarity=0.283 Sum_probs=71.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
+.+++|+|||+|.||+.+|+.|.+.|++|.+++|+.+... +.. ..++.++++++|+|++++|.. .+..++ +
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~-~~~~~~~~~~aDvVilav~~~-~~~~v~--~- 91 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAE-VLCYSEAASRSDVIVLAVHRE-HYDFLA--E- 91 (201)
Confidence 6788999999999999999999999999999999865211 222 237778899999999999964 566665 2
Q ss_pred HhcCCCCcEEEEcCCCccc
Q 043239 222 MTALGKEGVIINVGRGALI 240 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~v 240 (286)
+..++++.++||+++|-..
T Consensus 92 l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 92 LADSLKGRVLIDVSNNQKM 110 (201)
Confidence 3446789999999999753
No 92
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.98 E-value=4.2e-10 Score=106.85 Aligned_cols=92 Identities=15% Similarity=0.328 Sum_probs=72.2
Q ss_pred cccCCC-CEEEEEcCChHHHHHHHHhccC------CCEEEEECCCCCCC------CCccc----ccCHHHhhcCCCEEEE
Q 043239 143 GSTLGG-KRVGIVGLGSIGSEVAKRLVPF------GCSIAYTSRKKKPG------VSYPF----YANVSGLAADSDVLIV 205 (286)
Q Consensus 143 ~~~l~g-~~vgIiG~G~iG~~~A~~l~~~------g~~V~~~~r~~~~~------~~~~~----~~~l~e~l~~aDiV~~ 205 (286)
...|+| ++|||||+|+||.++|+.|+.. |++|++..++..+. .++.. ..++.+++++||+|++
T Consensus 48 ~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVIL 127 (525)
T 3fr7_A 48 PEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLL 127 (525)
T ss_dssp HHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEE
T ss_pred hHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEE
Confidence 356899 9999999999999999999988 99987665543321 23332 2588999999999999
Q ss_pred eccCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 043239 206 CCALTEETHHMINKDVMTALGKEGVIINVGRG 237 (286)
Q Consensus 206 ~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg 237 (286)
++|..... .++. +.++.||+|++ |..+.|
T Consensus 128 aVP~~~~~-eVl~-eI~p~LK~GaI-Ls~AaG 156 (525)
T 3fr7_A 128 LISDAAQA-DNYE-KIFSHMKPNSI-LGLSHG 156 (525)
T ss_dssp CSCHHHHH-HHHH-HHHHHSCTTCE-EEESSS
T ss_pred CCChHHHH-HHHH-HHHHhcCCCCe-EEEeCC
Confidence 99976554 4665 78999999998 466667
No 93
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.98 E-value=1.6e-10 Score=101.86 Aligned_cols=98 Identities=11% Similarity=0.261 Sum_probs=76.3
Q ss_pred cccCCCCEEEEEcCChHHHHHHHHhccCCCE-EEEECCCCCCCC------CcccccCHHHhhcCCCEEEEeccCChhhhh
Q 043239 143 GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCS-IAYTSRKKKPGV------SYPFYANVSGLAADSDVLIVCCALTEETHH 215 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~-V~~~~r~~~~~~------~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~ 215 (286)
.+++.+++|+|||+|.||+.+++.|...|++ |.+++|+.+... +.....+++++++++|+|++++|.. ....
T Consensus 5 ~~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~~ 83 (266)
T 3d1l_A 5 KRSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFAE 83 (266)
T ss_dssp --CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHHH
T ss_pred hcCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHHH
Confidence 3456678999999999999999999988998 899999865422 3334568888899999999999954 3454
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCH
Q 043239 216 MINKDVMTALGKEGVIINVGRGALIDE 242 (286)
Q Consensus 216 ~i~~~~l~~mk~g~ilvn~srg~~vd~ 242 (286)
++ ++..+.++++.++|+++.|...+.
T Consensus 84 v~-~~l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 84 LL-QGIVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp HH-HHHHTTCCTTCEEEECCTTSCGGG
T ss_pred HH-HHHHhhcCCCcEEEECCCCCchHH
Confidence 44 455667889999999999876543
No 94
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.97 E-value=3.3e-10 Score=103.19 Aligned_cols=113 Identities=13% Similarity=0.076 Sum_probs=84.6
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC----------------C--------------cccccCHHHhh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV----------------S--------------YPFYANVSGLA 197 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----------------~--------------~~~~~~l~e~l 197 (286)
-++|+|||+|.||..+|..+...|++|++||++++... + .....++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 36899999999999999999999999999999865311 1 12356888999
Q ss_pred cCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccC
Q 043239 198 ADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLR 263 (286)
Q Consensus 198 ~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~ 263 (286)
++||+|+.|+|...+....+-++..+.++++++|++.+.+ +....+.+.+.. .-+..+..-+.
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~-~~r~ig~Hp~~ 148 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVN 148 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECS
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCC-CCCeEEeecCC
Confidence 9999999999987666555556777889999999876555 445566666643 33445555554
No 95
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.96 E-value=6e-10 Score=105.27 Aligned_cols=121 Identities=10% Similarity=0.078 Sum_probs=87.2
Q ss_pred CCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----------------------CcccccCHHHhh
Q 043239 141 PLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----------------------SYPFYANVSGLA 197 (286)
Q Consensus 141 ~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----------------------~~~~~~~l~e~l 197 (286)
.++++..-++|+|||+|.||..+|..|.. |++|++||+++++.. ......++.+++
T Consensus 29 ~~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~ 107 (432)
T 3pid_A 29 QMGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAY 107 (432)
T ss_dssp ------CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHH
T ss_pred ccccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHH
Confidence 35677778899999999999999999998 999999999875321 122346788999
Q ss_pred cCCCEEEEeccCChhh-------hhcc--cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCC
Q 043239 198 ADSDVLIVCCALTEET-------HHMI--NKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTS 265 (286)
Q Consensus 198 ~~aDiV~~~lp~~~~t-------~~~i--~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e 265 (286)
++||+|++|+|...+. ..+. -+...+ +++|+++|+.|+-.+-..+.+.+.+.+..+. ...+|..|
T Consensus 108 ~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v~--~sPe~~~~ 181 (432)
T 3pid_A 108 RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNVI--FSPEFLRE 181 (432)
T ss_dssp TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCEE--ECCCCCCT
T ss_pred hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccEe--ecCccCCc
Confidence 9999999999964211 1111 245666 8999999999999988899999988776543 24444433
No 96
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.95 E-value=4.4e-10 Score=107.44 Aligned_cols=105 Identities=9% Similarity=0.178 Sum_probs=81.5
Q ss_pred CEEEEEcCChHHHHHHHHhccC--CCEEEEECCCCCCCC------------------------CcccccCHHHhhcCCCE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF--GCSIAYTSRKKKPGV------------------------SYPFYANVSGLAADSDV 202 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~--g~~V~~~~r~~~~~~------------------------~~~~~~~l~e~l~~aDi 202 (286)
++|+|||+|.||..+|..|... |++|++||++.++.. +.....++.+++++||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 5899999999999999999988 899999999764311 11223577888999999
Q ss_pred EEEeccCChhhhhc-------------ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCC
Q 043239 203 LIVCCALTEETHHM-------------INKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGS 253 (286)
Q Consensus 203 V~~~lp~~~~t~~~-------------i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~ 253 (286)
|++|+|......++ ..+...+.|++|.++||.|+..+-..+.+.+.+.+..
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~ 149 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANT 149 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhC
Confidence 99999854432221 1234567789999999999988888888999888864
No 97
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.91 E-value=5.5e-10 Score=100.54 Aligned_cols=110 Identities=13% Similarity=0.142 Sum_probs=79.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------------CcccccCHHHhhcCCCEEEEeccCChhh
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------------SYPFYANVSGLAADSDVLIVCCALTEET 213 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------------~~~~~~~l~e~l~~aDiV~~~lp~~~~t 213 (286)
-+.++|||||+|.||..||+.+. .|++|++||++++... +.....++++ +++||+|+.|+|...+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v 87 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT 87 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence 35789999999999999999999 9999999999875432 1223456766 89999999999998887
Q ss_pred hhcccHHHHhcCCCCcEEE-EcCCCcccCHHHHHHHHHhCCeeEEEeeccC
Q 043239 214 HHMINKDVMTALGKEGVII-NVGRGALIDEKELVHFLVRGSLVELVLMCLR 263 (286)
Q Consensus 214 ~~~i~~~~l~~mk~g~ilv-n~srg~~vd~~al~~al~~~~i~ga~lDv~~ 263 (286)
+..+-.+ +..+ ++++++ |+|.-++ ..+.+.+. ..-+..++-.|.
T Consensus 88 k~~l~~~-l~~~-~~~IlasntSti~~---~~~a~~~~-~~~r~~G~Hf~~ 132 (293)
T 1zej_A 88 KVEVLRE-VERL-TNAPLCSNTSVISV---DDIAERLD-SPSRFLGVHWMN 132 (293)
T ss_dssp HHHHHHH-HHTT-CCSCEEECCSSSCH---HHHHTTSS-CGGGEEEEEECS
T ss_pred HHHHHHH-HhcC-CCCEEEEECCCcCH---HHHHHHhh-cccceEeEEecC
Confidence 6666444 5556 998885 7777554 34444442 233456666666
No 98
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=98.90 E-value=1.4e-09 Score=96.33 Aligned_cols=99 Identities=17% Similarity=0.287 Sum_probs=76.2
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cc--ccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SY--PFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~--~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
++|+|||+|.||+.+|+.|...|++|++++|+.+... +. ....+++++ +++|+|++++|. ..+..++ ++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~-~~~~~~~-~~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPI-QLILPTL-EKL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCH-HHHHHHH-HHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCH-HHHHHHH-HHH
Confidence 4899999999999999999999999999999765321 22 124578888 899999999994 4455555 356
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHH
Q 043239 222 MTALGKEGVIINVGRGALIDEKELVHFLV 250 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~vd~~al~~al~ 250 (286)
.+.++++.++||++.......+.+.+.+.
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~ 106 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQLWS 106 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHHHST
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHHHhC
Confidence 67789999999997776665666655543
No 99
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.89 E-value=9.8e-10 Score=104.53 Aligned_cols=151 Identities=11% Similarity=0.085 Sum_probs=100.6
Q ss_pred CCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCC---CCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEE
Q 043239 101 NAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGA---YPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYT 177 (286)
Q Consensus 101 ~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~---~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~ 177 (286)
+.|-..|.|.+.+++|...|. .++|..... +.....-.=++|+|||+|.||..+|..+...|++|++|
T Consensus 13 ~~~~~~~~~~~~~~~~~a~~~---------~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~ 83 (460)
T 3k6j_A 13 GENLYFQGSEVRSYLMEAHSL---------AGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLV 83 (460)
T ss_dssp SGGGGGCBCHHHHHHHHTTCC---------TTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccchhhhhHHHHHHHHhHHHh---------hccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEE
Confidence 445556777777777773322 345653211 11111122368999999999999999999999999999
Q ss_pred CCCCCCC-------------CC-------------cccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEE
Q 043239 178 SRKKKPG-------------VS-------------YPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVI 231 (286)
Q Consensus 178 ~r~~~~~-------------~~-------------~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~il 231 (286)
|++.++. .+ .....+++ .+++||+|+.++|...+.+..+-++..+.++++++|
T Consensus 84 D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIl 162 (460)
T 3k6j_A 84 VRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKSTCIF 162 (460)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEE
T ss_pred ECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEE
Confidence 9987621 01 11245664 689999999999987776655556777889999999
Q ss_pred EEcCCCcccCHHHHHHHHHhCCeeEEEeeccCC
Q 043239 232 INVGRGALIDEKELVHFLVRGSLVELVLMCLRT 264 (286)
Q Consensus 232 vn~srg~~vd~~al~~al~~~~i~ga~lDv~~~ 264 (286)
++.+.+ +....+.+.+.. .-+.+++..|.+
T Consensus 163 asnTSs--l~i~~ia~~~~~-p~r~iG~HffnP 192 (460)
T 3k6j_A 163 GTNTSS--LDLNEISSVLRD-PSNLVGIHFFNP 192 (460)
T ss_dssp EECCSS--SCHHHHHTTSSS-GGGEEEEECCSS
T ss_pred EecCCC--hhHHHHHHhccC-CcceEEEEecch
Confidence 654333 344566655543 345677787773
No 100
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.88 E-value=3.7e-09 Score=96.16 Aligned_cols=102 Identities=15% Similarity=0.233 Sum_probs=77.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCC----CEEEEECCCCC--CCC-----CcccccCHHHhhcCCCEEEEeccCChhhh
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFG----CSIAYTSRKKK--PGV-----SYPFYANVSGLAADSDVLIVCCALTEETH 214 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g----~~V~~~~r~~~--~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~ 214 (286)
...++|+|||+|.||..+|..|...| ++|++|+|+.+ ... +.....+..+++++||+|++|+| .....
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~ 98 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIP 98 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHH
Confidence 34568999999999999999999988 78999999875 221 34445678889999999999999 45566
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 043239 215 HMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVR 251 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~ 251 (286)
.++ ++..+.++++.++|+++.|-. .+.+.+.+.+
T Consensus 99 ~vl-~~l~~~l~~~~ivvs~s~gi~--~~~l~~~l~~ 132 (322)
T 2izz_A 99 FIL-DEIGADIEDRHIVVSCAAGVT--ISSIEKKLSA 132 (322)
T ss_dssp HHH-HHHGGGCCTTCEEEECCTTCC--HHHHHHHHHT
T ss_pred HHH-HHHHhhcCCCCEEEEeCCCCC--HHHHHHHHhh
Confidence 555 356667889999999977643 4556666664
No 101
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.88 E-value=1.5e-09 Score=86.96 Aligned_cols=85 Identities=19% Similarity=0.334 Sum_probs=68.9
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------Cc--ccccCHHHhhcCCCEEEEeccCChhhhhcccH
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------SY--PFYANVSGLAADSDVLIVCCALTEETHHMINK 219 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~~--~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~ 219 (286)
+++|+|||.|.||+.+++.|...|++|.+++|+.++.. +. ....++.++++++|+|++++|.. ..++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~---~~~~~~ 97 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSK---TPIVEE 97 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCS---SCSBCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCC---CcEeeH
Confidence 78999999999999999999999999999999876432 11 23568889999999999999865 334544
Q ss_pred HHHhcCCCCcEEEEcCCCc
Q 043239 220 DVMTALGKEGVIINVGRGA 238 (286)
Q Consensus 220 ~~l~~mk~g~ilvn~srg~ 238 (286)
..+++|.+++|++...
T Consensus 98 ---~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 98 ---RSLMPGKLFIDLGNPP 113 (144)
T ss_dssp ---GGCCTTCEEEECCSSC
T ss_pred ---HHcCCCCEEEEccCCc
Confidence 4578999999998754
No 102
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.88 E-value=9.7e-09 Score=97.52 Aligned_cols=103 Identities=14% Similarity=0.268 Sum_probs=81.9
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC----C---------------------cccccCHHHhhcCCCEE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV----S---------------------YPFYANVSGLAADSDVL 203 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----~---------------------~~~~~~l~e~l~~aDiV 203 (286)
-+|+|||+|.||..+|..|...|++|++||+++++.. + .....++.+++++||+|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvv 88 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAV 88 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEE
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEE
Confidence 3899999999999999999999999999999887521 1 12346788999999999
Q ss_pred EEeccCChh----------hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 204 IVCCALTEE----------THHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 204 ~~~lp~~~~----------t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
++|+|.... .+..+ +...+.+++|.++|+.|+-.+-..+.+.+.+.+.
T Consensus 89 ii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 89 FIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV 146 (446)
T ss_dssp EECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH
T ss_pred EEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh
Confidence 999885431 33333 4577889999999999987777778888877764
No 103
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.86 E-value=5.7e-09 Score=99.30 Aligned_cols=102 Identities=10% Similarity=0.195 Sum_probs=79.8
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-------------------------CcccccCHHHhhcCCCEE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-------------------------SYPFYANVSGLAADSDVL 203 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-------------------------~~~~~~~l~e~l~~aDiV 203 (286)
++|+|||+|.||..+|..|...|++|++||+++++.. ......++++++++||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 6899999999999999999999999999999864311 112346788889999999
Q ss_pred EEeccCCh---------hhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 043239 204 IVCCALTE---------ETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVR 251 (286)
Q Consensus 204 ~~~lp~~~---------~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~ 251 (286)
++|+|... ....++ +...+.+++|.++|+.|.-.+-..+.+.+.+.+
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99998543 333333 456778999999999997666666777776665
No 104
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.84 E-value=1.7e-09 Score=94.52 Aligned_cols=99 Identities=13% Similarity=0.283 Sum_probs=74.8
Q ss_pred CEEEEEcCChHHHHHHHHhccCCC----EEEEECCCCCCCC------CcccccCHHHhhcCCCEEEEeccCChhhhhccc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGC----SIAYTSRKKKPGV------SYPFYANVSGLAADSDVLIVCCALTEETHHMIN 218 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~----~V~~~~r~~~~~~------~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~ 218 (286)
++|+|||+|.||+.+++.|...|+ +|.+|+|++++.. +.....++.++++++|+|++|+|. .....++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~-~~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKP-DLYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCT-TTHHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCH-HHHHHHH-
Confidence 589999999999999999999998 9999999876432 344567889999999999999973 3445555
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 043239 219 KDVMTALGKEGVIINVGRGALIDEKELVHFLVR 251 (286)
Q Consensus 219 ~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~ 251 (286)
++..+.++++.++|++..|- ..+.+.+.+..
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~ 111 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGK--SIESTENAFNK 111 (247)
T ss_dssp ---CCSSCTTCEEEECSCCS--CHHHHHHHHCS
T ss_pred HHHHhhcCCCCEEEEecCCC--CHHHHHHHhCC
Confidence 45666788999999776553 34566666644
No 105
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.83 E-value=6.5e-09 Score=83.28 Aligned_cols=103 Identities=17% Similarity=0.282 Sum_probs=81.6
Q ss_pred CCCCEEEEEcC----ChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 146 LGGKRVGIVGL----GSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 146 l~g~~vgIiG~----G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
+.-++|+|||+ |.||..+++.|...|++|+.++++.++..+...+.|++|+....|++++++| .+....++. +.
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~~-~~ 89 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVAK-EA 89 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSC-HHHHHHHHH-HH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHHH-HH
Confidence 45678999999 9999999999999999999999886555566677899999999999999999 466666664 34
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 222 MTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
.+ +..+.++++.+. ..+++.+++++.+++
T Consensus 90 ~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 90 VE-AGFKKLWFQPGA----ESEEIRRFLEKAGVE 118 (138)
T ss_dssp HH-TTCCEEEECTTS----CCHHHHHHHHHHTCE
T ss_pred HH-cCCCEEEEcCcc----HHHHHHHHHHHCCCE
Confidence 44 566778887754 267888888887776
No 106
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.81 E-value=2.2e-09 Score=95.80 Aligned_cols=88 Identities=15% Similarity=0.294 Sum_probs=70.2
Q ss_pred CEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHH
Q 043239 149 KRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVM 222 (286)
Q Consensus 149 ~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l 222 (286)
++|+|||+ |.||+.+|+.|...|++|++|+|+.+... +.. ..++.+++++||+|++++|... +..++ ++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~-~~~~~~~~~~aDvVi~av~~~~-~~~v~-~~l~ 88 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIP-LTDGDGWIDEADVVVLALPDNI-IEKVA-EDIV 88 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCC-CCCSSGGGGTCSEEEECSCHHH-HHHHH-HHHG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCC-cCCHHHHhcCCCEEEEcCCchH-HHHHH-HHHH
Confidence 58999999 99999999999999999999999765321 222 2367788899999999999543 55555 4566
Q ss_pred hcCCCCcEEEEcCCCcc
Q 043239 223 TALGKEGVIINVGRGAL 239 (286)
Q Consensus 223 ~~mk~g~ilvn~srg~~ 239 (286)
+.++++.++|+++.|..
T Consensus 89 ~~l~~~~ivv~~s~~~~ 105 (286)
T 3c24_A 89 PRVRPGTIVLILDAAAP 105 (286)
T ss_dssp GGSCTTCEEEESCSHHH
T ss_pred HhCCCCCEEEECCCCch
Confidence 77899999999988863
No 107
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.79 E-value=5.1e-09 Score=94.19 Aligned_cols=112 Identities=10% Similarity=0.127 Sum_probs=78.3
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC----------------C------------------cccccCHH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV----------------S------------------YPFYANVS 194 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----------------~------------------~~~~~~l~ 194 (286)
++|+|||+|.||..+|..|...|++|++||++.+... + .....+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 5899999999999999999999999999999854311 0 11245777
Q ss_pred HhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccC
Q 043239 195 GLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLR 263 (286)
Q Consensus 195 e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~ 263 (286)
+.+++||+|++++|...+....+-++..+.++++++++..+.+ +....+.+.+.. .-+.++...+.
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~--i~~~~l~~~~~~-~~~~~g~h~~~ 161 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSS--LQITSIANATTR-QDRFAGLHFFN 161 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSS--SCHHHHHTTSSC-GGGEEEEEECS
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCC--CCHHHHHHhcCC-cccEEEEecCC
Confidence 7899999999999976554444445566678899988865444 334455555432 11234555554
No 108
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.79 E-value=4.6e-09 Score=97.20 Aligned_cols=102 Identities=20% Similarity=0.291 Sum_probs=80.5
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------CcccccCHHHhhc-CCCEEEEeccCChhhhhcc
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------SYPFYANVSGLAA-DSDVLIVCCALTEETHHMI 217 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~~~~~~~l~e~l~-~aDiV~~~lp~~~~t~~~i 217 (286)
++.|++|+|+|+|+||+.+|++|..+|++|+++|++.+... +.. ..+.++++. +||+++.|. +.++|
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~-~v~~~~ll~~~~DIvip~a-----~~~~I 243 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD-AVAPNAIYGVTCDIFAPCA-----LGAVL 243 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE-ECCGGGTTTCCCSEEEECS-----CSCCB
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEChHHHhccCCcEeeccc-----hHHHh
Confidence 58999999999999999999999999999999998764322 222 335566665 899998874 56688
Q ss_pred cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCe
Q 043239 218 NKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 218 ~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i 254 (286)
+.+.++.|+ ..++++.+++.+.+++ ..+.|+++++
T Consensus 244 ~~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi 278 (364)
T 1leh_A 244 NDFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGI 278 (364)
T ss_dssp STTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTC
T ss_pred CHHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCC
Confidence 888888884 4688999999987755 5577777766
No 109
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.79 E-value=6.1e-09 Score=98.62 Aligned_cols=102 Identities=15% Similarity=0.184 Sum_probs=78.1
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------------------------C-cccccCHHHhhcCCCEE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------------------------S-YPFYANVSGLAADSDVL 203 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------------------------~-~~~~~~l~e~l~~aDiV 203 (286)
++|+|||+|.||..+|..|...|++|+++|+++++.. + .....++++++++||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 4899999999999999999999999999998764311 1 22345777889999999
Q ss_pred EEeccCChh---------hhhcccHHHHhcCCC---CcEEEEcCCCcccC-HHHHHHHHHh
Q 043239 204 IVCCALTEE---------THHMINKDVMTALGK---EGVIINVGRGALID-EKELVHFLVR 251 (286)
Q Consensus 204 ~~~lp~~~~---------t~~~i~~~~l~~mk~---g~ilvn~srg~~vd-~~al~~al~~ 251 (286)
++|+|.... ....+ ++..+.+++ +.++|+.|+..+-. .+.+.+.+.+
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999986543 33333 455666888 99999998777655 6667777766
No 110
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.78 E-value=8.6e-09 Score=90.38 Aligned_cols=99 Identities=18% Similarity=0.369 Sum_probs=71.8
Q ss_pred CCEEEEEcCChHHHHHHHHhccCC----CEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFG----CSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMT 223 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g----~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~ 223 (286)
.++|+|||+|.||+.+|+.|...| ++|.+|+|+.+. .+.....+..++++++|+|++|+|. .....++. +..+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-~g~~~~~~~~~~~~~~D~vi~~v~~-~~~~~v~~-~l~~ 80 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-TTLNYMSSNEELARHCDIIVCAVKP-DIAGSVLN-NIKP 80 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-SSSEECSCHHHHHHHCSEEEECSCT-TTHHHHHH-HSGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-CceEEeCCHHHHHhcCCEEEEEeCH-HHHHHHHH-HHHH
Confidence 468999999999999999999888 689999998776 4444556888999999999999994 45555543 3445
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 224 ALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 224 ~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
.++ +.++|....| ++.+.+.+.+..+
T Consensus 81 ~l~-~~~vv~~~~g--i~~~~l~~~~~~~ 106 (262)
T 2rcy_A 81 YLS-SKLLISICGG--LNIGKLEEMVGSE 106 (262)
T ss_dssp GCT-TCEEEECCSS--CCHHHHHHHHCTT
T ss_pred hcC-CCEEEEECCC--CCHHHHHHHhCCC
Confidence 564 4555555444 2334666666553
No 111
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.77 E-value=6.9e-09 Score=92.64 Aligned_cols=100 Identities=13% Similarity=0.194 Sum_probs=77.5
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCC---EEEEECCCCCCCC------CcccccCHHHhhcCCCEEEEeccCChhhhhccc
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGC---SIAYTSRKKKPGV------SYPFYANVSGLAADSDVLIVCCALTEETHHMIN 218 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~---~V~~~~r~~~~~~------~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~ 218 (286)
.++|||||+|+||+.+++.|...|+ +|.+|+|+.++.. +.....+..+++++||+|++++|. .....++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl- 80 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVC- 80 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHH-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHH-
Confidence 4689999999999999999999998 8999999876422 444456888999999999999984 4445554
Q ss_pred HHHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHh
Q 043239 219 KDVMTA-LGKEGVIINVGRGALIDEKELVHFLVR 251 (286)
Q Consensus 219 ~~~l~~-mk~g~ilvn~srg~~vd~~al~~al~~ 251 (286)
++..+. ++++.++|+++-|- ..+.+.+.+..
T Consensus 81 ~~l~~~~l~~~~iiiS~~agi--~~~~l~~~l~~ 112 (280)
T 3tri_A 81 EELKDILSETKILVISLAVGV--TTPLIEKWLGK 112 (280)
T ss_dssp HHHHHHHHTTTCEEEECCTTC--CHHHHHHHHTC
T ss_pred HHHHhhccCCCeEEEEecCCC--CHHHHHHHcCC
Confidence 345555 78888999887664 35677777765
No 112
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.76 E-value=3e-09 Score=91.23 Aligned_cols=90 Identities=19% Similarity=0.278 Sum_probs=68.2
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
.+++|+|||+|.||+.+++.|...|++|.+++|+.+... +... .++.++++++|+|++++|. .....++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~-~~~~~~~~~~DvVi~av~~-~~~~~v~~--- 101 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQV-TFQEEAVSSPEVIFVAVFR-EHYSSLCS--- 101 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEE-EEHHHHTTSCSEEEECSCG-GGSGGGGG---
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCce-ecHHHHHhCCCEEEECCCh-HHHHHHHH---
Confidence 457899999999999999999999999999999765321 2222 3788889999999999994 44555553
Q ss_pred HhcCCCCcEEEEcCCCcccC
Q 043239 222 MTALGKEGVIINVGRGALID 241 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~vd 241 (286)
+..+.++.++||+++|...+
T Consensus 102 l~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 102 LSDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp GHHHHTTCEEEECCCCCHHH
T ss_pred HHHhcCCCEEEEeCCCcccc
Confidence 32233789999999997554
No 113
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.76 E-value=7.3e-09 Score=90.85 Aligned_cols=96 Identities=19% Similarity=0.311 Sum_probs=73.7
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVM 222 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l 222 (286)
++|+|||+|.||+.+++.|...|++|.+|+|+.++.. +.....+++++++++|+|++|+| ..... +.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~-----~v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFE-----TVL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHH-----HHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHH-----HHH
Confidence 5899999999999999999999999999999865421 34445688899999999999998 33333 445
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 223 TALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 223 ~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
..+++|.++|+++.|-- .+.+.+.+..+
T Consensus 78 ~~l~~~~~vv~~~~~~~--~~~l~~~~~~~ 105 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGIS--LQRLATFVGQD 105 (259)
T ss_dssp TTSCCCSCEEECCTTCC--HHHHHHHHCTT
T ss_pred HHhccCCEEEEeCCCCC--HHHHHHhcCCC
Confidence 55678999999976643 34566666543
No 114
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.75 E-value=5.1e-09 Score=94.92 Aligned_cols=105 Identities=17% Similarity=0.135 Sum_probs=78.2
Q ss_pred CCCEEEEEcCChHHHHHHHHhccC-CC-EEEEECCCCCCCC------C--cccccCHHHhhcCCCEEEEeccCChhhhhc
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPF-GC-SIAYTSRKKKPGV------S--YPFYANVSGLAADSDVLIVCCALTEETHHM 216 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~-g~-~V~~~~r~~~~~~------~--~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~ 216 (286)
..++|||||+|.||+.+++.|... |+ +|.+|+|+.++.. + .....+++++++++|+|++|+|. ...+
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~---~~~v 210 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLA---TEPI 210 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCC---SSCC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCC---CCcc
Confidence 456999999999999999998764 77 8999999875432 2 33467899999999999999985 3556
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEee
Q 043239 217 INKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLM 260 (286)
Q Consensus 217 i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lD 260 (286)
+.. +.+++|.++++++....-. ..+.+.+.+... ..+|
T Consensus 211 ~~~---~~l~~g~~vi~~g~~~p~~-~el~~~~~~~g~--~~vD 248 (312)
T 2i99_A 211 LFG---EWVKPGAHINAVGASRPDW-RELDDELMKEAV--LYVD 248 (312)
T ss_dssp BCG---GGSCTTCEEEECCCCSTTC-CSBCHHHHHHSE--EEES
T ss_pred cCH---HHcCCCcEEEeCCCCCCCc-eeccHHHHhcCE--EEEC
Confidence 654 5789999999998776533 445544444333 3566
No 115
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.72 E-value=5.2e-08 Score=90.04 Aligned_cols=218 Identities=14% Similarity=0.113 Sum_probs=129.3
Q ss_pred hhcccCCCCCCchhhhC-CCcEEecCCCCC----CCchHHH----------HhccCCceEEEEeCCCCCCHHHhccCCCc
Q 043239 7 DAYRRGAPGCFNPPLSE-RFTLLDPLLHSA----DSTHSFL----------SRHASSVRAILCLGPSPLTSDTLSLLPAL 71 (286)
Q Consensus 7 ~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~----~~~~~~~----------~~~~~~~d~i~~~~~~~~~~~~l~~~~~L 71 (286)
.-+|-...|...++|.+ .+++. +....+ -+-+++. .+.+ ++|+|+.. ..+...+.....+++
T Consensus 12 ~E~Rv~~~P~~v~~l~~~g~~v~-ve~~ag~~~~f~d~~y~~aga~i~~~~~~~~-~ad~i~~v-ksP~~~~~~~~~~g~ 88 (361)
T 1pjc_A 12 QEFRVGLSPSSVRTLVEAGHTVF-IETQAGIGAGFADQDYVQAGAQVVPSAKDAW-SREMVVKV-KEPLPAEYDLMQKDQ 88 (361)
T ss_dssp TCCCCSCCHHHHHHHHTTTCEEE-EETTTTGGGTCCHHHHHHHTCEEESSHHHHH-TSSEEECS-SCCCGGGGGGCCTTC
T ss_pred CCCeeCcCHHHHHHHHhCCCEEE-EeCCCCccCCCCHHHHHHCCCEEECCHHHHh-cCCeEEEE-CCCCHHHHHhhcCCC
Confidence 34555667777777765 45553 322222 1112222 1223 68887752 334433333334566
Q ss_pred cEEEEcCCCCCcCChhHHhhcCeEEEec---CCCC-----CcChHHHHH--HHHHHHHhcchHHHHHHHcCCCCCCCCC-
Q 043239 72 EIVVGSTAGIDHVDLQECRRRGILVTNA---GNAF-----SEDGADYVV--GLLVDVLRRVSSIDRFVRNGLWPDHGAY- 140 (286)
Q Consensus 72 k~i~~~~~G~d~id~~~~~~~gI~v~n~---~~~~-----~~~vAE~~l--~~~L~~~R~~~~~~~~~~~~~w~~~~~~- 140 (286)
..+......++.-.++.+.++|+...|. |.-. -.++++.+- +.+++. .++... ..|. +..
T Consensus 89 ~~~~y~~~~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~gA-~nt~~~----~~g~----G~~l 159 (361)
T 1pjc_A 89 LLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGA-RFLERQ----QGGR----GVLL 159 (361)
T ss_dssp EEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHH-HHTSGG----GTSC----CCCT
T ss_pred EEEEEeccccCHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHHH-HHHhhc----cCCC----ceec
Confidence 5665555555543456778889888753 4321 133444333 344433 222211 1111 000
Q ss_pred CCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cccc-------ccCHHHhhcCCCEEEEecc
Q 043239 141 PLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPF-------YANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 141 ~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~-------~~~l~e~l~~aDiV~~~lp 208 (286)
..-..+.+++|+|+|.|.+|+.+++.++.+|++|++++|+.++.. +... ..++.+.+.++|+|+.+++
T Consensus 160 ~~l~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~ 239 (361)
T 1pjc_A 160 GGVPGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVL 239 (361)
T ss_dssp TCBTTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCC
T ss_pred cCCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCC
Confidence 001247789999999999999999999999999999999865422 1111 1245667789999999986
Q ss_pred CCh-hhhhcccHHHHhcCCCCcEEEEcCC
Q 043239 209 LTE-ETHHMINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 209 ~~~-~t~~~i~~~~l~~mk~g~ilvn~sr 236 (286)
... ....++.++.++.|+++++++|++-
T Consensus 240 ~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 240 VPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred cCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 532 2344567888999999999999973
No 116
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.71 E-value=9.1e-09 Score=83.06 Aligned_cols=104 Identities=16% Similarity=0.232 Sum_probs=81.6
Q ss_pred CCEEEEEcC----ChHHHHHHHHhccCCCEEEEECCCC--CCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 148 GKRVGIVGL----GSIGSEVAKRLVPFGCSIAYTSRKK--KPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 148 g~~vgIiG~----G~iG~~~A~~l~~~g~~V~~~~r~~--~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
-++|+|||+ |.||..+++.|...|++|+.++++. +...+...+.+++++....|++++++| .+....++. +.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~-~~ 90 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQ-EA 90 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHH-HH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHH-HH
Confidence 468999999 8999999999999999999998876 444566667889998889999999999 466666664 34
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEE
Q 043239 222 MTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELV 258 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~ 258 (286)
.+ ...+.++++.+.- ++++.+++++.+++..+
T Consensus 91 ~~-~g~~~i~i~~~~~----~~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 91 IA-IGAKTLWLQLGVI----NEQAAVLAREAGLSVVM 122 (145)
T ss_dssp HH-HTCCEEECCTTCC----CHHHHHHHHTTTCEEEC
T ss_pred HH-cCCCEEEEcCChH----HHHHHHHHHHcCCEEEc
Confidence 43 5567788876422 78889999988887543
No 117
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.68 E-value=8e-09 Score=90.64 Aligned_cols=95 Identities=21% Similarity=0.270 Sum_probs=70.0
Q ss_pred CEEEEEcCChHHHHHHHHhccCC-CEEEEECCCCCCCC------CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFG-CSIAYTSRKKKPGV------SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g-~~V~~~~r~~~~~~------~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
++|+|||+|.||+.+|+.|...| ++|.+|+|+.++.. +.....++.+++ ++|+|++++| ......++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~---- 74 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAAC---- 74 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHH----
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHH----
Confidence 48999999999999999999889 99999999865421 333345677778 9999999999 54544443
Q ss_pred HhcCC-CCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 222 MTALG-KEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 222 l~~mk-~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
..+. ++.++|+++.|-- .+.+.+.+..+
T Consensus 75 -~~l~~~~~ivv~~~~g~~--~~~l~~~~~~~ 103 (263)
T 1yqg_A 75 -KNIRTNGALVLSVAAGLS--VGTLSRYLGGT 103 (263)
T ss_dssp -TTCCCTTCEEEECCTTCC--HHHHHHHTTSC
T ss_pred -HHhccCCCEEEEecCCCC--HHHHHHHcCCC
Confidence 2332 2889999965533 36677776653
No 118
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.67 E-value=2.9e-08 Score=87.92 Aligned_cols=87 Identities=21% Similarity=0.260 Sum_probs=66.5
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----C--cc-----cccCHHHhhcCCCEEEEeccCChhhhhc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----S--YP-----FYANVSGLAADSDVLIVCCALTEETHHM 216 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~--~~-----~~~~l~e~l~~aDiV~~~lp~~~~t~~~ 216 (286)
++|+|||+|.||..+|..|...|++|++|+|+.+... + .. ...+..+.++++|+|++++|.. .+..+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~-~~~~v 79 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW-QVSDA 79 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG-GHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH-hHHHH
Confidence 4799999999999999999999999999999876432 1 00 0122346778999999999964 45555
Q ss_pred ccHHHHhcCCCCcEEEEcCCC
Q 043239 217 INKDVMTALGKEGVIINVGRG 237 (286)
Q Consensus 217 i~~~~l~~mk~g~ilvn~srg 237 (286)
+ ++..+.+++++++|++..|
T Consensus 80 ~-~~l~~~l~~~~~vv~~~~g 99 (291)
T 1ks9_A 80 V-KSLASTLPVTTPILLIHNG 99 (291)
T ss_dssp H-HHHHTTSCTTSCEEEECSS
T ss_pred H-HHHHhhCCCCCEEEEecCC
Confidence 4 4566778899999998765
No 119
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.66 E-value=6e-08 Score=89.53 Aligned_cols=92 Identities=15% Similarity=0.157 Sum_probs=72.7
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-------------C------cccccCHHHhhcCCCEEEEecc
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-------------S------YPFYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-------------~------~~~~~~l~e~l~~aDiV~~~lp 208 (286)
.++|+|||.|.||..+|..|...|++|.+|+|+++... + .....++.++++++|+|++++|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp 108 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVP 108 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCC
Confidence 46899999999999999999999999999999754211 0 1224688899999999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccC
Q 043239 209 LTEETHHMINKDVMTALGKEGVIINVGRGALID 241 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd 241 (286)
. ...+.++ ++..+.++++.++|+++.|-..+
T Consensus 109 ~-~~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 109 S-FAFHEVI-TRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCCSCBTT
T ss_pred H-HHHHHHH-HHHHHhcCCCCEEEEEeCCCCcC
Confidence 4 4555554 45677789999999998875544
No 120
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.66 E-value=7.4e-08 Score=83.57 Aligned_cols=99 Identities=18% Similarity=0.211 Sum_probs=75.4
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEE-EEECCCCCCCCCcccccCHHHhh-cCCCEEEEeccCChhhhhcccHHHHhcCC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSI-AYTSRKKKPGVSYPFYANVSGLA-ADSDVLIVCCALTEETHHMINKDVMTALG 226 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V-~~~~r~~~~~~~~~~~~~l~e~l-~~aDiV~~~lp~~~~t~~~i~~~~l~~mk 226 (286)
++|||||+|.||+.+++.+...|+++ .++|++.+ ... .+.++++++ .++|+|++|+|.... . +.....++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~-~~~--~~~~~~~l~~~~~DvVv~~~~~~~~-~----~~~~~~l~ 72 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE-HEK--MVRGIDEFLQREMDVAVEAASQQAV-K----DYAEKILK 72 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-CTT--EESSHHHHTTSCCSEEEECSCHHHH-H----HHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc-hhh--hcCCHHHHhcCCCCEEEECCCHHHH-H----HHHHHHHH
Confidence 47999999999999999998889987 68998753 222 567899999 699999999984322 2 22344567
Q ss_pred CCcEEEEcCCCcccCH---HHHHHHHHhCCee
Q 043239 227 KEGVIINVGRGALIDE---KELVHFLVRGSLV 255 (286)
Q Consensus 227 ~g~ilvn~srg~~vd~---~al~~al~~~~i~ 255 (286)
.|..+|+.+.+..-+. +.|.++.++.+..
T Consensus 73 ~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~ 104 (236)
T 2dc1_A 73 AGIDLIVLSTGAFADRDFLSRVREVCRKTGRR 104 (236)
T ss_dssp TTCEEEESCGGGGGSHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEECcccCChHHHHHHHHHHHHhcCCe
Confidence 8999999988887666 6777777765543
No 121
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.66 E-value=3.1e-08 Score=90.55 Aligned_cols=101 Identities=18% Similarity=0.204 Sum_probs=75.3
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------Cc--------------ccccCHHHhhcCCCEEEEecc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------SY--------------PFYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~~--------------~~~~~l~e~l~~aDiV~~~lp 208 (286)
++|+|||+|.||..+|..|...|++|.+++|+++... +. ....+++++++++|+|++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 6899999999999999999999999999999754311 10 134578888899999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 209 LTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
... ...++ ++..+.+++++++|++ .|.......+.+.+.+.
T Consensus 85 ~~~-~~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~~ 125 (359)
T 1bg6_A 85 AIH-HASIA-ANIASYISEGQLIILN-PGATGGALEFRKILREN 125 (359)
T ss_dssp GGG-HHHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHHT
T ss_pred chH-HHHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHhc
Confidence 554 34444 5567778999999999 44223444456666553
No 122
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.66 E-value=3.1e-08 Score=94.88 Aligned_cols=103 Identities=13% Similarity=0.156 Sum_probs=75.9
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------------C-------------cccccCHHHhhcCCCE
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------------S-------------YPFYANVSGLAADSDV 202 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------------~-------------~~~~~~l~e~l~~aDi 202 (286)
.++|+|||+|.||..+|..|...|++|++||++.++.. + .....++++.+++||+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 46999999999999999999999999999998754311 1 1123467788899999
Q ss_pred EEEeccCC---------hhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 043239 203 LIVCCALT---------EETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVR 251 (286)
Q Consensus 203 V~~~lp~~---------~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~ 251 (286)
|++|+|.. ...+..+ +...+.++++.++|+.|.-.+-..+.+.+.+.+
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 99999853 3344433 456677999999999985444445555555543
No 123
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.65 E-value=4.4e-08 Score=93.68 Aligned_cols=99 Identities=12% Similarity=0.105 Sum_probs=75.7
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CC-EEEEECCCCC----CCC----C---c--------------------ccccCHHH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GC-SIAYTSRKKK----PGV----S---Y--------------------PFYANVSG 195 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~-~V~~~~r~~~----~~~----~---~--------------------~~~~~l~e 195 (286)
++|+|||+|.||..+|..|... |+ +|++||++.+ +.. + . ....+ .+
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd-~e 97 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD-FS 97 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-GG
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-HH
Confidence 5899999999999999999999 99 9999999887 210 0 0 11233 57
Q ss_pred hhcCCCEEEEeccCCh--------hhhhcc--cHHHHhcCCCCcEEEEcCCCcccCHHHHHHH
Q 043239 196 LAADSDVLIVCCALTE--------ETHHMI--NKDVMTALGKEGVIINVGRGALIDEKELVHF 248 (286)
Q Consensus 196 ~l~~aDiV~~~lp~~~--------~t~~~i--~~~~l~~mk~g~ilvn~srg~~vd~~al~~a 248 (286)
.+++||+|++|+|... +...+. .+...+.+++|.++|+.|+-.+-..+.+.+.
T Consensus 98 a~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ 160 (478)
T 3g79_A 98 RISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQ 160 (478)
T ss_dssp GGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHH
T ss_pred HHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHH
Confidence 7899999999999642 222222 2457788999999999998888777777753
No 124
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.64 E-value=4.3e-08 Score=89.72 Aligned_cols=90 Identities=21% Similarity=0.185 Sum_probs=69.9
Q ss_pred CCEEEEEcCChHHHHHHHHhccCC-------CEEEEECCCCC-----CCC-------------------CcccccCHHHh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFG-------CSIAYTSRKKK-----PGV-------------------SYPFYANVSGL 196 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g-------~~V~~~~r~~~-----~~~-------------------~~~~~~~l~e~ 196 (286)
.++|+|||+|.||..+|..|...| ++|.+|+|+.+ ... ......+++++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 368999999999999999999888 89999999876 110 01223578888
Q ss_pred hcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcc
Q 043239 197 AADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGAL 239 (286)
Q Consensus 197 l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~ 239 (286)
+++||+|++++|. .....++ ++..+.+++++++|+++.|-.
T Consensus 88 ~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 88 AEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred HcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 9999999999994 4555554 355667889999999988754
No 125
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.63 E-value=4.2e-08 Score=91.98 Aligned_cols=101 Identities=10% Similarity=0.103 Sum_probs=76.8
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cc------------------ccccCHHHhhcCCCEEEE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SY------------------PFYANVSGLAADSDVLIV 205 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~------------------~~~~~l~e~l~~aDiV~~ 205 (286)
++|+|||+|.||..+|..|.. |++|++++++.++.. +. ....++.+.+++||+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 489999999999999999999 999999999764321 11 223467788899999999
Q ss_pred eccCCh----------hhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 206 CCALTE----------ETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 206 ~lp~~~----------~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
|+|... .....+ +...+ ++++.++|+.|.-.+-..+.+.+.+.+.
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~ 134 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD 134 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS
T ss_pred ecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC
Confidence 999653 234333 34556 8999999998877776777787776554
No 126
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.62 E-value=2.5e-08 Score=92.39 Aligned_cols=87 Identities=14% Similarity=0.208 Sum_probs=68.1
Q ss_pred CEEEEEcCChHHHHHHHHhccCC-------CEEEEECCCCC-----CCC-------------------CcccccCHHHhh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFG-------CSIAYTSRKKK-----PGV-------------------SYPFYANVSGLA 197 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g-------~~V~~~~r~~~-----~~~-------------------~~~~~~~l~e~l 197 (286)
++|+|||+|.||..+|..|...| ++|++|+|+.+ ... +.....++.+++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998888 89999999876 210 112235677888
Q ss_pred cCCCEEEEeccCChhhhhcccHHHHh----cCCCCcEEEEcCCC
Q 043239 198 ADSDVLIVCCALTEETHHMINKDVMT----ALGKEGVIINVGRG 237 (286)
Q Consensus 198 ~~aDiV~~~lp~~~~t~~~i~~~~l~----~mk~g~ilvn~srg 237 (286)
+++|+|++++|. .....++ ++..+ .+++++++|+++.|
T Consensus 102 ~~aDvVilav~~-~~~~~vl-~~i~~~~~~~l~~~~ivvs~~~G 143 (375)
T 1yj8_A 102 NDADLLIFIVPC-QYLESVL-ASIKESESIKIASHAKAISLTKG 143 (375)
T ss_dssp TTCSEEEECCCH-HHHHHHH-HHHTC---CCCCTTCEEEECCCS
T ss_pred cCCCEEEEcCCH-HHHHHHH-HHHhhhhhccCCCCCEEEEeCCc
Confidence 999999999993 5555554 34555 68889999999887
No 127
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.62 E-value=3.4e-08 Score=94.67 Aligned_cols=104 Identities=10% Similarity=0.188 Sum_probs=78.2
Q ss_pred CEEEEEcCChHHHHHHHHhccC--CCEEEEECCCCCCCC------------C------------cccccCHHHhhcCCCE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF--GCSIAYTSRKKKPGV------------S------------YPFYANVSGLAADSDV 202 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~--g~~V~~~~r~~~~~~------------~------------~~~~~~l~e~l~~aDi 202 (286)
++|+|||+|.||..+|..|... |++|++||++.++.. + .....++.+.+++||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5899999999999999999887 789999998754311 0 1123466788899999
Q ss_pred EEEeccCChh--------------hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh-CC
Q 043239 203 LIVCCALTEE--------------THHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVR-GS 253 (286)
Q Consensus 203 V~~~lp~~~~--------------t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~-~~ 253 (286)
|++|+|.... .... -+...+.+++|.++|+.|.-.+-..+.+.+.+.+ .+
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~-~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~ 154 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESV-SRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQK 154 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHH-HHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC
T ss_pred EEEecCCccccccccccCCCcHHHHHHH-HHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhC
Confidence 9999985421 2222 2456778999999999987777667778888877 44
No 128
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.61 E-value=3.3e-08 Score=84.92 Aligned_cols=87 Identities=18% Similarity=0.226 Sum_probs=63.1
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEE-ECCCCCCCC------CcccccCHHHhhcCCCEEEEeccCChhhhhcccHH
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAY-TSRKKKPGV------SYPFYANVSGLAADSDVLIVCCALTEETHHMINKD 220 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~-~~r~~~~~~------~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~ 220 (286)
-++|+|||+|.||..+|+.|...|++|.+ ++|+.++.. +.....+..+.++++|+|++++|. .....++. +
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~-~~~~~v~~-~ 100 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY-DSIADIVT-Q 100 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG-GGHHHHHT-T
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh-HHHHHHHH-H
Confidence 36899999999999999999999999988 999876543 222234555668999999999983 23333322 1
Q ss_pred HHhcCCCCcEEEEcCCCc
Q 043239 221 VMTALGKEGVIINVGRGA 238 (286)
Q Consensus 221 ~l~~mk~g~ilvn~srg~ 238 (286)
... .++.++|+++.|-
T Consensus 101 l~~--~~~~ivi~~~~g~ 116 (220)
T 4huj_A 101 VSD--WGGQIVVDASNAI 116 (220)
T ss_dssp CSC--CTTCEEEECCCCB
T ss_pred hhc--cCCCEEEEcCCCC
Confidence 112 2578999998664
No 129
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.61 E-value=3e-08 Score=89.87 Aligned_cols=100 Identities=13% Similarity=0.131 Sum_probs=72.8
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECC--CCCCC-----CCc-----------cccc--CHHHhhcCCCEEEEecc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSR--KKKPG-----VSY-----------PFYA--NVSGLAADSDVLIVCCA 208 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r--~~~~~-----~~~-----------~~~~--~l~e~l~~aDiV~~~lp 208 (286)
++|+|||+|.||..+|..|...|++|++++| +.+.. .+. .... ++.+.++++|+|++++|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 4799999999999999999998999999999 65321 111 1223 67788899999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCc---c-cCHHHHHHHHHh
Q 043239 209 LTEETHHMINKDVMTALGKEGVIINVGRGA---L-IDEKELVHFLVR 251 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~mk~g~ilvn~srg~---~-vd~~al~~al~~ 251 (286)
.. ....++ ++..+ ++++.++|+++.|- . -..+.+.+.+.+
T Consensus 81 ~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 81 TD-GVLPVM-SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp GG-GHHHHH-HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred hH-HHHHHH-HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 54 455444 34556 88999999998774 1 122445555554
No 130
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.60 E-value=5e-08 Score=92.17 Aligned_cols=106 Identities=17% Similarity=0.205 Sum_probs=76.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC----Cc--ccccCHHHh---------------hcCCCEEE
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV----SY--PFYANVSGL---------------AADSDVLI 204 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----~~--~~~~~l~e~---------------l~~aDiV~ 204 (286)
-+|.++.|||+|.||..+|.+|...|++|++||+++++.. +. .....++|+ +++||+|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 4688999999999999999999999999999999876432 10 011122222 45799999
Q ss_pred EeccCChhh--------hhcc--cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 043239 205 VCCALTEET--------HHMI--NKDVMTALGKEGVIINVGRGALIDEKELVHFLVR 251 (286)
Q Consensus 205 ~~lp~~~~t--------~~~i--~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~ 251 (286)
+|+|..... ..+. .+...+.|++|.++|+.|+-.+-..+.+.+.+.+
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e 145 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIE 145 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHH
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHH
Confidence 999954321 1222 2457788999999999998888888888776533
No 131
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.59 E-value=6.4e-08 Score=86.31 Aligned_cols=106 Identities=10% Similarity=0.125 Sum_probs=76.1
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCCCc------ccccCHHHhhcCCCEEEEeccCC--hhhhh
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGVSY------PFYANVSGLAADSDVLIVCCALT--EETHH 215 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~~~------~~~~~l~e~l~~aDiV~~~lp~~--~~t~~ 215 (286)
++.|+++.|+|.|.+|++++..|...|+ +|++++|+.++.... ....++.+.++++|+|++++|.. +....
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~ 193 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDS 193 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcC
Confidence 4788999999999999999999999999 899999998664321 12345667788999999999864 22221
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 216 MINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 216 ~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
.+. .+.++++.+++|+..... .+ .++++.++.++.
T Consensus 194 ~l~---~~~l~~~~~V~D~vY~P~-~T-~ll~~A~~~G~~ 228 (277)
T 3don_A 194 VIS---LNRLASHTLVSDIVYNPY-KT-PILIEAEQRGNP 228 (277)
T ss_dssp SSC---CTTCCSSCEEEESCCSSS-SC-HHHHHHHHTTCC
T ss_pred CCC---HHHcCCCCEEEEecCCCC-CC-HHHHHHHHCcCE
Confidence 232 355789999999987643 34 466666665543
No 132
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.59 E-value=1e-08 Score=94.50 Aligned_cols=89 Identities=10% Similarity=0.159 Sum_probs=68.5
Q ss_pred EEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-------------------CcccccCHHHhhcCCCEEEEeccCC
Q 043239 150 RVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-------------------SYPFYANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 150 ~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-------------------~~~~~~~l~e~l~~aDiV~~~lp~~ 210 (286)
+|+|||+|.||..+|..|...|++|.+|+|+.+... +.....++.++++++|+|++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 899999999999999999999999999999754211 112235788889999999999994
Q ss_pred hhhhhcccHH---HHhcCCC-CcEEEEcCCCcc
Q 043239 211 EETHHMINKD---VMTALGK-EGVIINVGRGAL 239 (286)
Q Consensus 211 ~~t~~~i~~~---~l~~mk~-g~ilvn~srg~~ 239 (286)
.....++... ..+.+++ +.++|+++.|-.
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~ 128 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIE 128 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCC
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCC
Confidence 5555555321 5556778 899999987743
No 133
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.58 E-value=1.7e-07 Score=83.17 Aligned_cols=81 Identities=16% Similarity=0.382 Sum_probs=68.0
Q ss_pred cccCCCCEEEEEcCChH-HHHHHHHhccC--CCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccH
Q 043239 143 GSTLGGKRVGIVGLGSI-GSEVAKRLVPF--GCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINK 219 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~i-G~~~A~~l~~~--g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~ 219 (286)
+.+++|+++.|||.|.| |+.+|+.|... |.+|++..++. .++.+.+++||+|+.+++. .+++.+
T Consensus 153 ~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t---------~~L~~~~~~ADIVI~Avg~----p~~I~~ 219 (281)
T 2c2x_A 153 DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT---------RDLPALTRQADIVVAAVGV----AHLLTA 219 (281)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC---------SCHHHHHTTCSEEEECSCC----TTCBCG
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch---------hHHHHHHhhCCEEEECCCC----CcccCH
Confidence 34689999999999985 99999999999 89999887543 5899999999999999873 336777
Q ss_pred HHHhcCCCCcEEEEcCCCcc
Q 043239 220 DVMTALGKEGVIINVGRGAL 239 (286)
Q Consensus 220 ~~l~~mk~g~ilvn~srg~~ 239 (286)
++ +|+|+++||+|.-.+
T Consensus 220 ~~---vk~GavVIDVgi~r~ 236 (281)
T 2c2x_A 220 DM---VRPGAAVIDVGVSRT 236 (281)
T ss_dssp GG---SCTTCEEEECCEEEE
T ss_pred HH---cCCCcEEEEccCCCC
Confidence 66 589999999986654
No 134
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.56 E-value=1e-07 Score=86.43 Aligned_cols=91 Identities=21% Similarity=0.240 Sum_probs=70.5
Q ss_pred CcccCCCCEEEEEcCChH-HHHHHHHhccCCCEEEEECCCCCC----CC----Cccc------c--cCHHHhhcCCCEEE
Q 043239 142 LGSTLGGKRVGIVGLGSI-GSEVAKRLVPFGCSIAYTSRKKKP----GV----SYPF------Y--ANVSGLAADSDVLI 204 (286)
Q Consensus 142 ~~~~l~g~~vgIiG~G~i-G~~~A~~l~~~g~~V~~~~r~~~~----~~----~~~~------~--~~l~e~l~~aDiV~ 204 (286)
.+.++.|+++.|||.|.| |+.+|+.|...|.+|++.+|+... .. .... . .++.+.+++||+|+
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVI 250 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVI 250 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEE
Confidence 466799999999999986 999999999999999999887221 11 1111 1 57889999999999
Q ss_pred EeccCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 043239 205 VCCALTEETHHMINKDVMTALGKEGVIINVGRGA 238 (286)
Q Consensus 205 ~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~ 238 (286)
.+++. ...+|..+. +|+|+++||+|...
T Consensus 251 sAtg~---p~~vI~~e~---vk~GavVIDVgi~r 278 (320)
T 1edz_A 251 TGVPS---ENYKFPTEY---IKEGAVCINFACTK 278 (320)
T ss_dssp ECCCC---TTCCBCTTT---SCTTEEEEECSSSC
T ss_pred ECCCC---CcceeCHHH---cCCCeEEEEcCCCc
Confidence 99873 233477666 58999999998654
No 135
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.56 E-value=5.1e-08 Score=84.67 Aligned_cols=70 Identities=16% Similarity=0.213 Sum_probs=58.3
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCC
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGK 227 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~ 227 (286)
.++|+|||+|.||.++|+.|+..|++|.+|++. ++ +++|| ++++|.. ....++ ++..+.+++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~-------------~~-~~~aD--ilavP~~-ai~~vl-~~l~~~l~~ 67 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP-------------ED-IRDFE--LVVIDAH-GVEGYV-EKLSAFARR 67 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG-------------GG-GGGCS--EEEECSS-CHHHHH-HHHHTTCCT
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH-------------HH-hccCC--EEEEcHH-HHHHHH-HHHHHhcCC
Confidence 468999999999999999999999999999983 22 57899 7889975 556555 456677899
Q ss_pred CcEEEEcC
Q 043239 228 EGVIINVG 235 (286)
Q Consensus 228 g~ilvn~s 235 (286)
|++++|++
T Consensus 68 g~ivvd~s 75 (232)
T 3dfu_A 68 GQMFLHTS 75 (232)
T ss_dssp TCEEEECC
T ss_pred CCEEEEEC
Confidence 99999985
No 136
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.56 E-value=1.4e-07 Score=84.05 Aligned_cols=80 Identities=23% Similarity=0.369 Sum_probs=67.4
Q ss_pred cccCCCCEEEEEcCCh-HHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 143 GSTLGGKRVGIVGLGS-IGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~-iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
+.+++|+++.|||.|. +|+.+|+.|...|++|++.++.. .++.+.+++||+|+.+++. .+++..++
T Consensus 154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------~~L~~~~~~ADIVI~Avg~----p~lI~~~~ 220 (288)
T 1b0a_A 154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT---------KNLRHHVENADLLIVAVGK----PGFIPGDW 220 (288)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC---------SCHHHHHHHCSEEEECSCC----TTCBCTTT
T ss_pred CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHhccCCEEEECCCC----cCcCCHHH
Confidence 3468999999999997 59999999999999999887532 5799999999999999883 33677666
Q ss_pred HhcCCCCcEEEEcCCCc
Q 043239 222 MTALGKEGVIINVGRGA 238 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~ 238 (286)
+|+|+++||+|.-.
T Consensus 221 ---vk~GavVIDVgi~r 234 (288)
T 1b0a_A 221 ---IKEGAIVIDVGINR 234 (288)
T ss_dssp ---SCTTCEEEECCCEE
T ss_pred ---cCCCcEEEEccCCc
Confidence 58999999999654
No 137
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.56 E-value=2.7e-08 Score=95.44 Aligned_cols=113 Identities=11% Similarity=0.114 Sum_probs=81.7
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC----------------Cc-------------ccccCHHHhhcC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV----------------SY-------------PFYANVSGLAAD 199 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----------------~~-------------~~~~~l~e~l~~ 199 (286)
++|||||+|.||..+|..+...|++|++||++.+... +. ....+++ .+++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~~ 84 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALAA 84 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-HhcC
Confidence 5899999999999999999999999999999875321 10 1234554 6889
Q ss_pred CCEEEEeccCChhhhhcccHHHHhcCCCCcEEE-EcCCCcccCHHHHHHHHHhCCeeEEEeeccCCCC
Q 043239 200 SDVLIVCCALTEETHHMINKDVMTALGKEGVII-NVGRGALIDEKELVHFLVRGSLVELVLMCLRTSL 266 (286)
Q Consensus 200 aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilv-n~srg~~vd~~al~~al~~~~i~ga~lDv~~~e~ 266 (286)
||+|+.++|...+....+-++..+.++++++|+ |+|.-+ ...+.+.+. ..-+.+++..|.+.+
T Consensus 85 aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~---i~~ia~~~~-~p~~~ig~hf~~Pa~ 148 (483)
T 3mog_A 85 ADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSIS---ITAIAAEIK-NPERVAGLHFFNPAP 148 (483)
T ss_dssp CSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSC---HHHHTTTSS-SGGGEEEEEECSSTT
T ss_pred CCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCC---HHHHHHHcc-CccceEEeeecChhh
Confidence 999999999876665445566777899999984 666544 345555553 234556777776443
No 138
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.56 E-value=1.8e-07 Score=83.29 Aligned_cols=80 Identities=23% Similarity=0.385 Sum_probs=67.2
Q ss_pred cccCCCCEEEEEcCCh-HHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 143 GSTLGGKRVGIVGLGS-IGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~-iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
+.+++|+++.|||.|. +|+.+|+.|...|++|++..++ ..++++.+++||+|+.+++. .+++..+.
T Consensus 156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~---------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 222 (285)
T 3l07_A 156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF---------TTDLKSHTTKADILIVAVGK----PNFITADM 222 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSSHHHHHTTCSEEEECCCC----TTCBCGGG
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC---------chhHHHhcccCCEEEECCCC----CCCCCHHH
Confidence 3468999999999988 6999999999999999988764 24789999999999999873 44576654
Q ss_pred HhcCCCCcEEEEcCCCc
Q 043239 222 MTALGKEGVIINVGRGA 238 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~ 238 (286)
+|+|+++||++.-.
T Consensus 223 ---vk~GavVIDvgi~~ 236 (285)
T 3l07_A 223 ---VKEGAVVIDVGINH 236 (285)
T ss_dssp ---SCTTCEEEECCCEE
T ss_pred ---cCCCcEEEEecccC
Confidence 59999999998544
No 139
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.55 E-value=1.9e-07 Score=83.16 Aligned_cols=80 Identities=21% Similarity=0.388 Sum_probs=67.5
Q ss_pred cccCCCCEEEEEcCCh-HHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 143 GSTLGGKRVGIVGLGS-IGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~-iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
+.+++|+++.|||.|. +|+.+|..|...|++|++..++ ..++++.+++||+|+.+++. .+++..+.
T Consensus 155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~---------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 221 (285)
T 3p2o_A 155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK---------TKDLSLYTRQADLIIVAAGC----VNLLRSDM 221 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSCHHHHHTTCSEEEECSSC----TTCBCGGG
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC---------chhHHHHhhcCCEEEECCCC----CCcCCHHH
Confidence 3468999999999988 6999999999999999998764 24789999999999999873 44676655
Q ss_pred HhcCCCCcEEEEcCCCc
Q 043239 222 MTALGKEGVIINVGRGA 238 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~ 238 (286)
+|+|+++||++.-.
T Consensus 222 ---vk~GavVIDVgi~~ 235 (285)
T 3p2o_A 222 ---VKEGVIVVDVGINR 235 (285)
T ss_dssp ---SCTTEEEEECCCEE
T ss_pred ---cCCCeEEEEeccCc
Confidence 59999999998544
No 140
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.54 E-value=1.6e-07 Score=83.13 Aligned_cols=77 Identities=17% Similarity=0.327 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCCh-HHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhc
Q 043239 146 LGGKRVGIVGLGS-IGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTA 224 (286)
Q Consensus 146 l~g~~vgIiG~G~-iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~ 224 (286)
++|+++.|||.|. +|+.+|+.|...|++|+++.+. ..++++.+++||+|+.+++. .+++.++.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~---------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~--- 211 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK---------TKDIGSMTRSSKIVVVAVGR----PGFLNREM--- 211 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSCHHHHHHHSSEEEECSSC----TTCBCGGG---
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC---------cccHHHhhccCCEEEECCCC----CccccHhh---
Confidence 7899999999986 8999999999999999998763 35799999999999999874 34677655
Q ss_pred CCCCcEEEEcCCCc
Q 043239 225 LGKEGVIINVGRGA 238 (286)
Q Consensus 225 mk~g~ilvn~srg~ 238 (286)
+|+|+++||++.-.
T Consensus 212 vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 212 VTPGSVVIDVGINY 225 (276)
T ss_dssp CCTTCEEEECCCEE
T ss_pred ccCCcEEEEeccCc
Confidence 59999999998543
No 141
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.54 E-value=9.8e-08 Score=85.92 Aligned_cols=106 Identities=15% Similarity=0.194 Sum_probs=76.8
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC------Cc---cc--ccCHHHhhcCCCEEEEeccCChh
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV------SY---PF--YANVSGLAADSDVLIVCCALTEE 212 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~------~~---~~--~~~l~e~l~~aDiV~~~lp~~~~ 212 (286)
++.+++++|+|.|.+|++++..|...|+ +|++++|+.++.. +. .. ..++.+.+.++|+|++++|....
T Consensus 138 ~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~ 217 (297)
T 2egg_A 138 TLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMH 217 (297)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCS
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCC
Confidence 4678999999999999999999999998 9999999865421 11 11 13566778899999999986542
Q ss_pred hh--h-cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 213 TH--H-MINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 213 t~--~-~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
.. . .+. ...++++.+++|++.. +..+. |+++.++.++.
T Consensus 218 ~~~~~~~i~---~~~l~~~~~v~D~~y~-P~~T~-ll~~A~~~G~~ 258 (297)
T 2egg_A 218 PRVEVQPLS---LERLRPGVIVSDIIYN-PLETK-WLKEAKARGAR 258 (297)
T ss_dssp SCCSCCSSC---CTTCCTTCEEEECCCS-SSSCH-HHHHHHHTTCE
T ss_pred CCCCCCCCC---HHHcCCCCEEEEcCCC-CCCCH-HHHHHHHCcCE
Confidence 11 1 122 2457899999999885 34443 76766766554
No 142
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.54 E-value=1.5e-07 Score=84.30 Aligned_cols=79 Identities=15% Similarity=0.314 Sum_probs=66.2
Q ss_pred ccCCCCEEEEEcCCh-HHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHH--HhhcCCCEEEEeccCChhhhhcccHH
Q 043239 144 STLGGKRVGIVGLGS-IGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVS--GLAADSDVLIVCCALTEETHHMINKD 220 (286)
Q Consensus 144 ~~l~g~~vgIiG~G~-iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~--e~l~~aDiV~~~lp~~~~t~~~i~~~ 220 (286)
.+++|+++.|||.|. +|+.+|+.|...|++|+++++.. .+++ +.+++||+|+.+++. .+++..+
T Consensus 161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T---------~~l~l~~~~~~ADIVI~Avg~----p~~I~~~ 227 (300)
T 4a26_A 161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT---------STEDMIDYLRTADIVIAAMGQ----PGYVKGE 227 (300)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS---------CHHHHHHHHHTCSEEEECSCC----TTCBCGG
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC---------CCchhhhhhccCCEEEECCCC----CCCCcHH
Confidence 468999999999988 79999999999999999998732 2567 999999999999984 3467665
Q ss_pred HHhcCCCCcEEEEcCCCc
Q 043239 221 VMTALGKEGVIINVGRGA 238 (286)
Q Consensus 221 ~l~~mk~g~ilvn~srg~ 238 (286)
. +|+|+++||++.-.
T Consensus 228 ~---vk~GavVIDvgi~~ 242 (300)
T 4a26_A 228 W---IKEGAAVVDVGTTP 242 (300)
T ss_dssp G---SCTTCEEEECCCEE
T ss_pred h---cCCCcEEEEEeccC
Confidence 5 59999999998543
No 143
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.54 E-value=4.1e-08 Score=89.47 Aligned_cols=96 Identities=18% Similarity=0.269 Sum_probs=69.1
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----C-----------cccccCHHHhhcCCCEEEEeccCCh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----S-----------YPFYANVSGLAADSDVLIVCCALTE 211 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~-----------~~~~~~l~e~l~~aDiV~~~lp~~~ 211 (286)
-++|+|||+|.||..+|..|...|++|.+|+|+.++.. + .....++.+ ++.+|+|++++|. .
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~-~ 91 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPV-Q 91 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCG-G
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCH-H
Confidence 35899999999999999999999999999999754321 1 233457778 8899999999993 5
Q ss_pred hhhhcccHHHHhcCC-CCcEEEEcCCC-cccCHHHHHHHHH
Q 043239 212 ETHHMINKDVMTALG-KEGVIINVGRG-ALIDEKELVHFLV 250 (286)
Q Consensus 212 ~t~~~i~~~~l~~mk-~g~ilvn~srg-~~vd~~al~~al~ 250 (286)
.++.++ ..++ ++.++|+++.| +.-..+.+.+.+.
T Consensus 92 ~~~~v~-----~~l~~~~~~vv~~~nGi~~~~~~~l~~~~~ 127 (335)
T 1z82_A 92 YIREHL-----LRLPVKPSMVLNLSKGIEIKTGKRVSEIVE 127 (335)
T ss_dssp GHHHHH-----TTCSSCCSEEEECCCCCCTTTCCCHHHHHH
T ss_pred HHHHHH-----HHhCcCCCEEEEEeCCCCCCccCcHHHHHH
Confidence 555443 3343 78899999877 3222233444443
No 144
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.54 E-value=3e-08 Score=84.12 Aligned_cols=111 Identities=20% Similarity=0.232 Sum_probs=78.4
Q ss_pred CEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCC------C-----c-ccccCHHHhhcCCCEEEEeccCChhhhh
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------S-----Y-PFYANVSGLAADSDVLIVCCALTEETHH 215 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~-----~-~~~~~l~e~l~~aDiV~~~lp~~~~t~~ 215 (286)
++|+|+| .|.||+.+++.|...|++|.+++|+.++.. + . ....++.++++++|+|++++|. .....
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~-~~~~~ 79 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPW-EHAID 79 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCH-HHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCCh-hhHHH
Confidence 4799999 999999999999999999999998764321 1 0 1135677889999999999983 34444
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccC------------HHHHHHHHHhCCeeEEEeeccCCCC
Q 043239 216 MINKDVMTALGKEGVIINVGRGALID------------EKELVHFLVRGSLVELVLMCLRTSL 266 (286)
Q Consensus 216 ~i~~~~l~~mk~g~ilvn~srg~~vd------------~~al~~al~~~~i~ga~lDv~~~e~ 266 (286)
++. +..+.++ +.++|++++|--.+ .+.+.+.+... ..++++.+.+
T Consensus 80 ~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~~----~~v~~~~~~~ 136 (212)
T 1jay_A 80 TAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESE----KVVSALHTIP 136 (212)
T ss_dssp HHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTCS----CEEECCTTCC
T ss_pred HHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCCC----eEEEEccchH
Confidence 442 3334454 89999999875432 56777776532 2456665543
No 145
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.53 E-value=3.1e-07 Score=82.29 Aligned_cols=81 Identities=17% Similarity=0.343 Sum_probs=68.2
Q ss_pred cccCCCCEEEEEcCCh-HHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 143 GSTLGGKRVGIVGLGS-IGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~-iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
+.++.|+++.|||.|. +|+.+|+.|...|++|++.++. ..++.+.+++||+|+.+++. .++|..++
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~---------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 226 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK---------TAHLDEEVNKGDILVVATGQ----PEMVKGEW 226 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSSHHHHHTTCSEEEECCCC----TTCBCGGG
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC---------cccHHHHhccCCEEEECCCC----cccCCHHH
Confidence 4469999999999996 6999999999999999998753 35899999999999999874 34677766
Q ss_pred HhcCCCCcEEEEcCCCcc
Q 043239 222 MTALGKEGVIINVGRGAL 239 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~ 239 (286)
+|+|+++||+|.-.+
T Consensus 227 ---vk~GavVIDVgi~~~ 241 (301)
T 1a4i_A 227 ---IKPGAIVIDCGINYV 241 (301)
T ss_dssp ---SCTTCEEEECCCBC-
T ss_pred ---cCCCcEEEEccCCCc
Confidence 589999999997654
No 146
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.53 E-value=4.3e-08 Score=87.73 Aligned_cols=103 Identities=14% Similarity=0.202 Sum_probs=72.9
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cccc------------ccCHHHhhc---CCCEEEEecc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPF------------YANVSGLAA---DSDVLIVCCA 208 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~------------~~~l~e~l~---~aDiV~~~lp 208 (286)
++|+|||+|.||..+|..|...|++|++++|+.+... +... ..+..++.+ ++|+|++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 5899999999999999999999999999999764321 1100 113334444 8999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCe
Q 043239 209 LTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i 254 (286)
. .....++ ++..+.++++.++|+++.|- -..+.+.+.+.+.++
T Consensus 84 ~-~~~~~v~-~~l~~~l~~~~~iv~~~~g~-~~~~~l~~~~~~~~v 126 (316)
T 2ew2_A 84 A-QQLDAMF-KAIQPMITEKTYVLCLLNGL-GHEDVLEKYVPKENI 126 (316)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCSSS-CTHHHHTTTSCGGGE
T ss_pred c-ccHHHHH-HHHHHhcCCCCEEEEecCCC-CcHHHHHHHcCCccE
Confidence 4 4555554 45667788999999998753 234556666655444
No 147
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.52 E-value=2.4e-07 Score=82.45 Aligned_cols=80 Identities=21% Similarity=0.421 Sum_probs=66.8
Q ss_pred cccCCCCEEEEEcCCh-HHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 143 GSTLGGKRVGIVGLGS-IGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~-iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
+.+++|+++.|||.|. +|+.+|..|...|++|++..+. ..++++.+++||+|+.+++. .+++..+.
T Consensus 156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~---------T~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 222 (286)
T 4a5o_A 156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF---------TRDLADHVSRADLVVVAAGK----PGLVKGEW 222 (286)
T ss_dssp TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT---------CSCHHHHHHTCSEEEECCCC----TTCBCGGG
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC---------CcCHHHHhccCCEEEECCCC----CCCCCHHH
Confidence 3468999999999987 7999999999999999988653 24789999999999999873 44677655
Q ss_pred HhcCCCCcEEEEcCCCc
Q 043239 222 MTALGKEGVIINVGRGA 238 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~ 238 (286)
+|+|+++||++.-.
T Consensus 223 ---vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 223 ---IKEGAIVIDVGINR 236 (286)
T ss_dssp ---SCTTCEEEECCSCS
T ss_pred ---cCCCeEEEEecccc
Confidence 59999999998543
No 148
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.50 E-value=8.8e-08 Score=91.40 Aligned_cols=112 Identities=13% Similarity=0.177 Sum_probs=78.0
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCC---------------------------cccccCHHHhhcCC
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVS---------------------------YPFYANVSGLAADS 200 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~---------------------------~~~~~~l~e~l~~a 200 (286)
-++|+|||+|.||..+|..+...|++|+++|++.+.... .....++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 468999999999999999999999999999987642110 0113455 567899
Q ss_pred CEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccC
Q 043239 201 DVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLR 263 (286)
Q Consensus 201 DiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~ 263 (286)
|+|+.++|...+....+-++..+.++++++|++ +..+ +....+.+.+.. .-+.+++..|.
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~s-nTs~-~~~~~la~~~~~-~~~~ig~hf~~ 175 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCT-NTSA-LNVDDIASSTDR-PQLVIGTHFFS 175 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEE-CCSS-SCHHHHHTTSSC-GGGEEEEEECS
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEe-CCCC-cCHHHHHHHhcC-CcceEEeecCC
Confidence 999999997654444444556677899999887 3333 334466665542 23345666664
No 149
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.47 E-value=1.8e-07 Score=82.39 Aligned_cols=100 Identities=16% Similarity=0.145 Sum_probs=74.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCCC------cccccCHHHhhcCCCEEEEeccCChhh-hhcc
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGVS------YPFYANVSGLAADSDVLIVCCALTEET-HHMI 217 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~~------~~~~~~l~e~l~~aDiV~~~lp~~~~t-~~~i 217 (286)
+.| +++|||.|.+|++++..|...|+ +|++++|+.++... .....++.+.++++|+|++++|..-.. ...+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~~~i 185 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEELPV 185 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCCCSC
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCCCCC
Confidence 578 99999999999999999999999 89999998764321 123467778899999999999864211 1234
Q ss_pred cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 218 NKDVMTALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 218 ~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
..+. ++++.+++|+..+ .+.-+.++.+.|
T Consensus 186 ~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 186 SDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp CHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 4433 5789999999888 455555555555
No 150
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.42 E-value=7.8e-08 Score=96.42 Aligned_cols=113 Identities=12% Similarity=0.111 Sum_probs=80.1
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC----------------C-------------cccccCHHHhhc
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV----------------S-------------YPFYANVSGLAA 198 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----------------~-------------~~~~~~l~e~l~ 198 (286)
=++|+|||+|.||..+|..+...|++|++||++.+... + .....++ +.++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 392 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFG 392 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGG
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHC
Confidence 35799999999999999999999999999999865321 1 1123455 6789
Q ss_pred CCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCC
Q 043239 199 DSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRT 264 (286)
Q Consensus 199 ~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~ 264 (286)
+||+|+.++|...+....+-++..+.++++++|++.+.+ +....+.+.+. ..-+.+++..|.+
T Consensus 393 ~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~-~~~~~ig~hf~~P 455 (715)
T 1wdk_A 393 NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST--ISISLLAKALK-RPENFVGMHFFNP 455 (715)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SCHHHHGGGCS-CGGGEEEEECCSS
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC--CCHHHHHHHhc-CccceEEEEccCC
Confidence 999999999987766555556677789999998754433 33345555553 2223466777763
No 151
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.36 E-value=3e-07 Score=81.59 Aligned_cols=104 Identities=13% Similarity=0.070 Sum_probs=74.3
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCCc----ccccCHHHhhcCCCEEEEeccCChhhhhcccHHHH-
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSY----PFYANVSGLAADSDVLIVCCALTEETHHMINKDVM- 222 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~----~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l- 222 (286)
++++.|+|.|.+|++++..|...|.+|++++|+.++.... ....+++++ .++|+|++++|..-.....+..+.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~~~~~l-~~~DiVInaTp~Gm~~~~~l~~~~l~ 196 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPK-SAFDLIINATSASLHNELPLNKEVLK 196 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEESSCCS-SCCSEEEECCTTCCCCSCSSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEecHHHh-ccCCEEEEcccCCCCCCCCCChHHHH
Confidence 7899999999999999999999999999999998764311 011133333 3899999999976432234555532
Q ss_pred hcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 223 TALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 223 ~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
+.++++.+++|+.... .+. ++++.++.++.
T Consensus 197 ~~l~~~~~v~D~vY~P--~T~-ll~~A~~~G~~ 226 (269)
T 3phh_A 197 GYFKEGKLAYDLAYGF--LTP-FLSLAKELKTP 226 (269)
T ss_dssp HHHHHCSEEEESCCSS--CCH-HHHHHHHTTCC
T ss_pred hhCCCCCEEEEeCCCC--chH-HHHHHHHCcCE
Confidence 3577899999999875 555 66555555443
No 152
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.35 E-value=2e-07 Score=93.57 Aligned_cols=112 Identities=15% Similarity=0.072 Sum_probs=78.4
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC----------------C-------------cccccCHHHhhcC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV----------------S-------------YPFYANVSGLAAD 199 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----------------~-------------~~~~~~l~e~l~~ 199 (286)
++|+|||+|.||..+|..+...|++|++||++.+... + .....++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 5799999999999999999999999999999764211 1 1123455 57899
Q ss_pred CCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCC
Q 043239 200 SDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRT 264 (286)
Q Consensus 200 aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~ 264 (286)
||+|+.++|...+....+-++..+.++++++|++.+.+ +....+.+.+.. .-+.+++..|.+
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~-p~~~iG~hf~~P 453 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTST--IDLNKIGERTKS-QDRIVGAHFFSP 453 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHTTTCSC-TTTEEEEEECSS
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCC--CCHHHHHHHhcC-CCCEEEecCCCC
Confidence 99999999987665555545677789999988654333 333455555432 223456666763
No 153
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.32 E-value=1.7e-06 Score=69.14 Aligned_cols=103 Identities=16% Similarity=0.141 Sum_probs=77.0
Q ss_pred CCEEEEEcC----ChHHHHHHHHhccCCCEEEEECCC--CCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 148 GKRVGIVGL----GSIGSEVAKRLVPFGCSIAYTSRK--KKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 148 g~~vgIiG~----G~iG~~~A~~l~~~g~~V~~~~r~--~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
-++|+|||. |.+|..+++.|...|++|+..++. .+...+...+.+++|+-...|++++++|. +....++. +.
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~~-~~ 90 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPP-SALMDHLP-EV 90 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTHH-HH
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHHH-HH
Confidence 458999999 899999999999999997777776 33344566678899988889999999995 56666664 33
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEE
Q 043239 222 MTALGKEGVIINVGRGALIDEKELVHFLVRGSLVEL 257 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga 257 (286)
.+ ...+.++++.+.. ++.+.+..++.+++..
T Consensus 91 ~~-~gi~~i~~~~g~~----~~~~~~~a~~~Gir~v 121 (140)
T 1iuk_A 91 LA-LRPGLVWLQSGIR----HPEFEKALKEAGIPVV 121 (140)
T ss_dssp HH-HCCSCEEECTTCC----CHHHHHHHHHTTCCEE
T ss_pred HH-cCCCEEEEcCCcC----HHHHHHHHHHcCCEEE
Confidence 33 2334666665432 5888888888877644
No 154
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=98.31 E-value=4e-06 Score=77.58 Aligned_cols=91 Identities=14% Similarity=0.288 Sum_probs=74.8
Q ss_pred cccCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCC----CCCC----C-----------CcccccCHHHhhcCCCE
Q 043239 143 GSTLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRK----KKPG----V-----------SYPFYANVSGLAADSDV 202 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~----~~~~----~-----------~~~~~~~l~e~l~~aDi 202 (286)
++++.+.+|.|+|.|.+|..+|+.|.+.|. +|+++||+ ..+. . ......+|.|+++++|+
T Consensus 187 g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADV 266 (388)
T 1vl6_A 187 EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADF 266 (388)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSE
T ss_pred CCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCE
Confidence 446889999999999999999999999999 89999998 4331 1 11124579999999999
Q ss_pred EEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 043239 203 LIVCCALTEETHHMINKDVMTALGKEGVIINVGRGA 238 (286)
Q Consensus 203 V~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~ 238 (286)
++-+. ..+++.+++++.|+++++++.+|+..
T Consensus 267 lIG~S-----ap~l~t~emVk~Ma~~pIIfalSNPt 297 (388)
T 1vl6_A 267 FIGVS-----RGNILKPEWIKKMSRKPVIFALANPV 297 (388)
T ss_dssp EEECS-----CSSCSCHHHHTTSCSSCEEEECCSSS
T ss_pred EEEeC-----CCCccCHHHHHhcCCCCEEEEcCCCC
Confidence 88763 13899999999999999999999764
No 155
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=98.30 E-value=7.1e-08 Score=85.64 Aligned_cols=82 Identities=17% Similarity=0.061 Sum_probs=55.3
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEE-EEECCCCCCCC------CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSI-AYTSRKKKPGV------SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V-~~~~r~~~~~~------~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
++|||||+|.||+.+++.|... ++| .+|+|+.+... +. ...+++++++++|+|++++|... . .+.
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~-~-----~~v 74 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRY-I-----KTV 74 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTT-H-----HHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHH-H-----HHH
Confidence 4799999999999999999887 888 58998765321 22 45577788889999999999643 2 233
Q ss_pred HhcC-CCCcEEEEcCCCc
Q 043239 222 MTAL-GKEGVIINVGRGA 238 (286)
Q Consensus 222 l~~m-k~g~ilvn~srg~ 238 (286)
+..+ +++.++||++.+-
T Consensus 75 ~~~l~~~~~ivi~~s~~~ 92 (276)
T 2i76_A 75 ANHLNLGDAVLVHCSGFL 92 (276)
T ss_dssp HTTTCCSSCCEEECCSSS
T ss_pred HHHhccCCCEEEECCCCC
Confidence 3444 6788999998553
No 156
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.30 E-value=5.9e-07 Score=84.09 Aligned_cols=89 Identities=21% Similarity=0.326 Sum_probs=70.0
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCC---C--------CCCcccccCHHHhhcCCCEEEEeccCChhh
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKK---P--------GVSYPFYANVSGLAADSDVLIVCCALTEET 213 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~---~--------~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t 213 (286)
-|+||+|+|||+|+-|.+-|..|+..|.+|.+--|... . ..++. ..+..|+++.||+|++.+|+..+.
T Consensus 34 ~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~-v~~~~eA~~~ADvV~~L~PD~~q~ 112 (491)
T 3ulk_A 34 YLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFK-VGTYEELIPQADLVINLTPDKQHS 112 (491)
T ss_dssp GGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCE-EEEHHHHGGGCSEEEECSCGGGHH
T ss_pred HHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCE-ecCHHHHHHhCCEEEEeCChhhHH
Confidence 48999999999999999999999999999987655221 1 12333 458999999999999999975444
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCC
Q 043239 214 HHMINKDVMTALGKEGVIINVGRG 237 (286)
Q Consensus 214 ~~~i~~~~l~~mk~g~ilvn~srg 237 (286)
. +. ++..++||+|+.+. .|.|
T Consensus 113 ~-vy-~~I~p~lk~G~~L~-faHG 133 (491)
T 3ulk_A 113 D-VV-RTVQPLMKDGAALG-YSHG 133 (491)
T ss_dssp H-HH-HHHGGGSCTTCEEE-ESSC
T ss_pred H-HH-HHHHhhCCCCCEEE-ecCc
Confidence 3 44 56999999999865 4555
No 157
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.28 E-value=2.9e-06 Score=68.10 Aligned_cols=104 Identities=15% Similarity=0.169 Sum_probs=77.1
Q ss_pred CCEEEEEcC----ChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHh
Q 043239 148 GKRVGIVGL----GSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMT 223 (286)
Q Consensus 148 g~~vgIiG~----G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~ 223 (286)
-++|+|||. |.+|..+++.|+..|++|+..++......+...+.+++++....|++++++|. +....++. +..+
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv~-~~~~ 99 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYVE-QAIK 99 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCH-HHHHHHHH-HHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeECCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHHH-HHHH
Confidence 579999999 79999999999999999877777654444566678999998889999999995 55555553 3333
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEE
Q 043239 224 ALGKEGVIINVGRGALIDEKELVHFLVRGSLVELV 258 (286)
Q Consensus 224 ~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~ 258 (286)
...+.+++..+ . .++.+.+.+++.+++..+
T Consensus 100 -~gi~~i~~~~g--~--~~~~l~~~a~~~Gi~vvG 129 (144)
T 2d59_A 100 -KGAKVVWFQYN--T--YNREASKKADEAGLIIVA 129 (144)
T ss_dssp -HTCSEEEECTT--C--CCHHHHHHHHHTTCEEEE
T ss_pred -cCCCEEEECCC--c--hHHHHHHHHHHcCCEEEc
Confidence 23345665533 2 378888988888777544
No 158
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.26 E-value=2.4e-06 Score=77.35 Aligned_cols=83 Identities=19% Similarity=0.290 Sum_probs=64.6
Q ss_pred CCEEEEEcCChHHHHHHHHhcc-CCC-EEEEECCCCCCCC---------Cc--ccccCHHHhhcCCCEEEEeccCChhhh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVP-FGC-SIAYTSRKKKPGV---------SY--PFYANVSGLAADSDVLIVCCALTEETH 214 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~-~g~-~V~~~~r~~~~~~---------~~--~~~~~l~e~l~~aDiV~~~lp~~~~t~ 214 (286)
.++++|||.|.||+.+++.|.. ++. +|.+|||+ +... +. ... ++++++++||+|++|+|.. .
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~---~ 195 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRST---T 195 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCS---S
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCC---C
Confidence 5699999999999999999875 344 79999999 3211 11 224 8999999999999999864 4
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCc
Q 043239 215 HMINKDVMTALGKEGVIINVGRGA 238 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~ilvn~srg~ 238 (286)
.++.. +.+++|+.++++|...
T Consensus 196 pvl~~---~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 196 PLFAG---QALRAGAFVGAIGSSL 216 (313)
T ss_dssp CSSCG---GGCCTTCEEEECCCSS
T ss_pred cccCH---HHcCCCcEEEECCCCC
Confidence 56653 4589999999998653
No 159
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.24 E-value=3.8e-06 Score=75.93 Aligned_cols=104 Identities=17% Similarity=0.253 Sum_probs=74.9
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC------------CC------cccccCHHHhhcCCCEEEEeccCC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG------------VS------YPFYANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~------------~~------~~~~~~l~e~l~~aDiV~~~lp~~ 210 (286)
++|+|||.|.||..+|..|...|++|.+|+|+.... .+ .....+++++.+.+|+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~~ 82 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKVV 82 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCCC
Confidence 689999999999999999999999999999975210 00 112346667666899999999954
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 211 EETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 211 ~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
++..++ +...+.+++++++|.+..|= -.++.+.+.+...++.
T Consensus 83 -~~~~~l-~~l~~~l~~~t~Iv~~~nGi-~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 83 -EGADRV-GLLRDAVAPDTGIVLISNGI-DIEPEVAAAFPDNEVI 124 (320)
T ss_dssp -TTCCHH-HHHTTSCCTTCEEEEECSSS-SCSHHHHHHSTTSCEE
T ss_pred -ChHHHH-HHHHhhcCCCCEEEEeCCCC-ChHHHHHHHCCCCcEE
Confidence 344433 45566788899999998772 2246677777655543
No 160
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=98.22 E-value=3.3e-07 Score=82.20 Aligned_cols=99 Identities=13% Similarity=0.247 Sum_probs=69.0
Q ss_pred CEEEEEcCChHHHHHHHHhccC-----C-CEEEEECCCCCCC------CCcccc-------------cCHHHhhcCCCEE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-----G-CSIAYTSRKKKPG------VSYPFY-------------ANVSGLAADSDVL 203 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-----g-~~V~~~~r~~~~~------~~~~~~-------------~~l~e~l~~aDiV 203 (286)
++|+|||+|.||..+|..|... | ++|++|+| .+.. .+.... .+..+.+..+|+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 5899999999999999999988 8 99999998 3321 121111 1233567899999
Q ss_pred EEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 043239 204 IVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVR 251 (286)
Q Consensus 204 ~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~ 251 (286)
++++|... ...++ +...+.++++.++|++..| +-..+.+.+.+.+
T Consensus 88 il~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~~ 132 (317)
T 2qyt_A 88 LFCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG-ADIAERMRTYLPD 132 (317)
T ss_dssp EECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS-SSHHHHHTTTSCT
T ss_pred EEecCccc-HHHHH-HHHHhhcCCCCEEEEccCC-CCcHHHHHHHCCC
Confidence 99999654 44444 3455667788999999776 2223555555544
No 161
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.20 E-value=8.1e-07 Score=80.94 Aligned_cols=105 Identities=16% Similarity=0.244 Sum_probs=74.8
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC----CCc-------------ccccCHHHhhcCCCEEEEeccCC
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG----VSY-------------PFYANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~----~~~-------------~~~~~l~e~l~~aDiV~~~lp~~ 210 (286)
.++|+|||+|.||..+|..|...|++|.+++|+.... .+. ....++++ +..+|+|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~- 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA- 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc-
Confidence 4689999999999999999999999999999852110 111 11246666 5899999999985
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCCCc------------------ccCHHHHHHHHHhCCee
Q 043239 211 EETHHMINKDVMTALGKEGVIINVGRGA------------------LIDEKELVHFLVRGSLV 255 (286)
Q Consensus 211 ~~t~~~i~~~~l~~mk~g~ilvn~srg~------------------~vd~~al~~al~~~~i~ 255 (286)
.++..++ ++..+.+++++++|.+..|= +-.++.+.+.+...++.
T Consensus 81 ~~~~~~~-~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~ 142 (335)
T 3ghy_A 81 PALESVA-AGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVL 142 (335)
T ss_dssp HHHHHHH-GGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEE
T ss_pred hhHHHHH-HHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEE
Confidence 4555444 34455678899999998882 23345666777555543
No 162
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=98.20 E-value=1.3e-06 Score=81.27 Aligned_cols=83 Identities=20% Similarity=0.276 Sum_probs=69.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHhccCCC---EEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHH
Q 043239 147 GGKRVGIVGL-GSIGSEVAKRLVPFGC---SIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVM 222 (286)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~A~~l~~~g~---~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l 222 (286)
...+|.|||. |..|...++.+.++|+ .|.++|++.... +.. + +.+.++|+||.++........++.++.+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~-g~~----~-~~i~~aDivIn~vlig~~aP~Lvt~e~v 286 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSR-GGP----F-DEIPQADIFINCIYLSKPIAPFTNMEKL 286 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTT-CSC----C-THHHHSSEEEECCCCCSSCCCSCCHHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccccc-CCc----h-hhHhhCCEEEECcCcCCCCCcccCHHHH
Confidence 4668999999 9999999999999998 899999875222 211 1 3466999999999986667789999999
Q ss_pred hcC-CCCcEEEEcC
Q 043239 223 TAL-GKEGVIINVG 235 (286)
Q Consensus 223 ~~m-k~g~ilvn~s 235 (286)
+.| |+|++|||+|
T Consensus 287 ~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 287 NNPNRRLRTVVDVS 300 (394)
T ss_dssp CCTTCCCCEEEETT
T ss_pred hcCcCCCeEEEEEe
Confidence 999 9999999997
No 163
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.18 E-value=5.9e-06 Score=74.40 Aligned_cols=104 Identities=15% Similarity=0.194 Sum_probs=73.1
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC---CC--------------cccccCHHHhhcCCCEEEEeccCCh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG---VS--------------YPFYANVSGLAADSDVLIVCCALTE 211 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~---~~--------------~~~~~~l~e~l~~aDiV~~~lp~~~ 211 (286)
++|+|||.|.||..+|..|...|++|++|+|+.... .+ .....+.++ ++.+|+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~~- 80 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRDYEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKTF- 80 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTTHHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCGG-
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCcHHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCCC-
Confidence 589999999999999999999999999999975210 01 011235544 67899999999843
Q ss_pred hhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeE
Q 043239 212 ETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVE 256 (286)
Q Consensus 212 ~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~g 256 (286)
++..++ +...+.+++++++|.+..|= -..+.+.+.+...++.+
T Consensus 81 ~~~~~l-~~l~~~l~~~~~iv~l~nGi-~~~~~l~~~~~~~~v~~ 123 (312)
T 3hn2_A 81 ANSRYE-ELIRPLVEEGTQILTLQNGL-GNEEALATLFGAERIIG 123 (312)
T ss_dssp GGGGHH-HHHGGGCCTTCEEEECCSSS-SHHHHHHHHTCGGGEEE
T ss_pred CcHHHH-HHHHhhcCCCCEEEEecCCC-CcHHHHHHHCCCCcEEE
Confidence 344443 45566788999999998772 22456667776555543
No 164
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.18 E-value=1.6e-06 Score=78.50 Aligned_cols=100 Identities=19% Similarity=0.333 Sum_probs=69.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----C-------------cccccCHHHhhcCCCEEEEec
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----S-------------YPFYANVSGLAADSDVLIVCC 207 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~-------------~~~~~~l~e~l~~aDiV~~~l 207 (286)
...++|+|||.|.||..+|..|...|++|.+| ++.+... + .....++++ ++.+|+|++++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilav 94 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCV 94 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEc
Confidence 34679999999999999999999999999999 6543211 1 111244544 58899999999
Q ss_pred cCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHH
Q 043239 208 ALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLV 250 (286)
Q Consensus 208 p~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~ 250 (286)
|.. ++..++ ++..+.+++++++|.+..|=- .++.+.+.+.
T Consensus 95 k~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi~-~~~~l~~~~~ 134 (318)
T 3hwr_A 95 KST-DTQSAA-LAMKPALAKSALVLSLQNGVE-NADTLRSLLE 134 (318)
T ss_dssp CGG-GHHHHH-HHHTTTSCTTCEEEEECSSSS-HHHHHHHHCC
T ss_pred ccc-cHHHHH-HHHHHhcCCCCEEEEeCCCCC-cHHHHHHHcC
Confidence 954 555554 455667889999999977732 2245555553
No 165
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.17 E-value=9.1e-07 Score=81.83 Aligned_cols=103 Identities=13% Similarity=0.039 Sum_probs=73.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC----Cc-------ccccCHHHhhcCCCEEEEeccCChhhh
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV----SY-------PFYANVSGLAADSDVLIVCCALTEETH 214 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----~~-------~~~~~l~e~l~~aDiV~~~lp~~~~t~ 214 (286)
-.+++|+|+|+|.||+.+++.|... .+|.+++|+.++.. .. ....++.++++++|+|++|+|.....
T Consensus 14 ~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~~- 91 (365)
T 2z2v_A 14 GRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGF- 91 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHHH-
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhhH-
Confidence 3578999999999999999999988 89999999876421 11 11346778899999999998844221
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 215 HMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
. + ....++.|..++|++.- .-+..+|.+..++.++.
T Consensus 92 ~-v---~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~~ 127 (365)
T 2z2v_A 92 K-S---IKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQVT 127 (365)
T ss_dssp H-H---HHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTCE
T ss_pred H-H---HHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCCE
Confidence 1 2 23345788899999853 33445677777766654
No 166
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.15 E-value=2.9e-06 Score=77.99 Aligned_cols=87 Identities=14% Similarity=0.131 Sum_probs=66.1
Q ss_pred CCCEEEEEcCChHHHHHHHHhcc-CC-CEEEEECCCCCCCC----------C--cccccCHHHhhcCCCEEEEeccCChh
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVP-FG-CSIAYTSRKKKPGV----------S--YPFYANVSGLAADSDVLIVCCALTEE 212 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~-~g-~~V~~~~r~~~~~~----------~--~~~~~~l~e~l~~aDiV~~~lp~~~~ 212 (286)
..++++|||+|.||+.+++.+.. .+ .+|.+|+|+.++.. + ...+.+++++++++|+|++|+|.. .
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~-~ 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADK-A 206 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCS-S
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCC-C
Confidence 35699999999999999988753 34 48999999865421 2 223578999999999999999965 2
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCC
Q 043239 213 THHMINKDVMTALGKEGVIINVGRG 237 (286)
Q Consensus 213 t~~~i~~~~l~~mk~g~ilvn~srg 237 (286)
...++.. +.+++|..++++|..
T Consensus 207 ~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 207 YATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp EEEEECG---GGCCTTCEEEECSCC
T ss_pred CCceecH---HHcCCCCEEEECCCC
Confidence 3445543 467899999999864
No 167
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.15 E-value=6.4e-07 Score=74.16 Aligned_cols=89 Identities=12% Similarity=0.189 Sum_probs=62.8
Q ss_pred ccCCCCEEEEEcCChHHHHHHHHhccC-CCEEEEECCCCCCCC-----Cccc----ccC---HHHh--hcCCCEEEEecc
Q 043239 144 STLGGKRVGIVGLGSIGSEVAKRLVPF-GCSIAYTSRKKKPGV-----SYPF----YAN---VSGL--AADSDVLIVCCA 208 (286)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~A~~l~~~-g~~V~~~~r~~~~~~-----~~~~----~~~---l~e~--l~~aDiV~~~lp 208 (286)
.++.+++|+|+|+|.||+.+|+.|... |++|++++++++... +... ..+ +.++ +.++|+|++++|
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 357788999999999999999999998 999999998765321 2211 112 3444 678999999998
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEc
Q 043239 209 LTEETHHMINKDVMTALGKEGVIINV 234 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~mk~g~ilvn~ 234 (286)
..+.+..++ ..+..+.+...+|..
T Consensus 115 ~~~~~~~~~--~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 115 HHQGNQTAL--EQLQRRNYKGQIAAI 138 (183)
T ss_dssp SHHHHHHHH--HHHHHTTCCSEEEEE
T ss_pred ChHHHHHHH--HHHHHHCCCCEEEEE
Confidence 655444433 345556666666554
No 168
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.13 E-value=4.6e-06 Score=67.21 Aligned_cols=94 Identities=14% Similarity=0.055 Sum_probs=61.3
Q ss_pred cccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------Cccc----ccC---HHHh-hcCCCEEEEecc
Q 043239 143 GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------SYPF----YAN---VSGL-AADSDVLIVCCA 208 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~~~~----~~~---l~e~-l~~aDiV~~~lp 208 (286)
.....+++|.|+|+|.+|+.+++.|+..|++|++++++++... +... ..+ +.+. +.++|+|++++|
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN 93 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence 4457788999999999999999999999999999998765421 1111 112 3333 678999999998
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 043239 209 LTEETHHMINKDVMTALGKEGVIINVGRGA 238 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~mk~g~ilvn~srg~ 238 (286)
.......+ ......+.+...+|-..++.
T Consensus 94 ~~~~~~~~--~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 94 DDSTNFFI--SMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp CHHHHHHH--HHHHHHTSCCSEEEEECSSG
T ss_pred CcHHHHHH--HHHHHHHCCCCeEEEEECCH
Confidence 54333222 23444445555555555554
No 169
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.08 E-value=5e-06 Score=77.38 Aligned_cols=86 Identities=12% Similarity=0.132 Sum_probs=66.4
Q ss_pred EEEEEcCChHHHHHHHHhccCCC--------EEEEECCCCCCCC------------------C------cccccCHHHhh
Q 043239 150 RVGIVGLGSIGSEVAKRLVPFGC--------SIAYTSRKKKPGV------------------S------YPFYANVSGLA 197 (286)
Q Consensus 150 ~vgIiG~G~iG~~~A~~l~~~g~--------~V~~~~r~~~~~~------------------~------~~~~~~l~e~l 197 (286)
+|+|||.|.+|.++|..|...|. +|..|.|.++... + .....++++++
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 89999999999999999987553 5999988654210 1 12346899999
Q ss_pred cCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 043239 198 ADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRG 237 (286)
Q Consensus 198 ~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg 237 (286)
++||+|++++| ++..+.++ ++..+.++++..+|+++.|
T Consensus 116 ~~ad~ii~avP-s~~~r~~l-~~l~~~~~~~~~iv~~~KG 153 (391)
T 4fgw_A 116 KDVDIIVFNIP-HQFLPRIC-SQLKGHVDSHVRAISCLKG 153 (391)
T ss_dssp TTCSEEEECSC-GGGHHHHH-HHHTTTSCTTCEEEECCCS
T ss_pred hcCCEEEEECC-hhhhHHHH-HHhccccCCCceeEEeccc
Confidence 99999999999 45555554 4556678899999999988
No 170
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.06 E-value=2.4e-06 Score=79.64 Aligned_cols=84 Identities=10% Similarity=0.107 Sum_probs=62.3
Q ss_pred CEEEEEcCChHHHHHHHHhcc-CCCEEEEEC---CCCCC------CCC---------c----------ccccCHHHhhcC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVP-FGCSIAYTS---RKKKP------GVS---------Y----------PFYANVSGLAAD 199 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~-~g~~V~~~~---r~~~~------~~~---------~----------~~~~~l~e~l~~ 199 (286)
++|+|||.|.||..+|..|.. .|++|.+|+ |+.+. ..+ . ....+++++++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 589999999999999999987 599999999 64221 001 1 023467888899
Q ss_pred CCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEc
Q 043239 200 SDVLIVCCALTEETHHMINKDVMTALGKEGVIINV 234 (286)
Q Consensus 200 aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~ 234 (286)
+|+|++++|.. ....++ ++..+.++++++||+.
T Consensus 83 aD~Vilav~~~-~~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAF-AHEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGG-GHHHHH-HHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchH-HHHHHH-HHHHhhCCCCcEEEEc
Confidence 99999999954 344443 4455677889999985
No 171
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.05 E-value=3.3e-06 Score=64.00 Aligned_cols=84 Identities=15% Similarity=0.108 Sum_probs=58.3
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCC-CEEEEECCCCCCCC-----Cc-------ccccCHHHhhcCCCEEEEeccCChhh
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFG-CSIAYTSRKKKPGV-----SY-------PFYANVSGLAADSDVLIVCCALTEET 213 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g-~~V~~~~r~~~~~~-----~~-------~~~~~l~e~l~~aDiV~~~lp~~~~t 213 (286)
.+++|+|+|.|.||+.+++.|...| ++|.+++|+.++.. +. ....++.++++++|+|+.++|... +
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~-~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL-T 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG-H
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh-h
Confidence 4679999999999999999999999 89999998764321 11 112345677889999999987432 2
Q ss_pred hhcccHHHHhcCCCCcEEEEcC
Q 043239 214 HHMINKDVMTALGKEGVIINVG 235 (286)
Q Consensus 214 ~~~i~~~~l~~mk~g~ilvn~s 235 (286)
..++. ...+.|..+++++
T Consensus 83 ~~~~~----~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 PIIAK----AAKAAGAHYFDLT 100 (118)
T ss_dssp HHHHH----HHHHTTCEEECCC
T ss_pred HHHHH----HHHHhCCCEEEec
Confidence 22221 1134677777775
No 172
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.04 E-value=2.4e-06 Score=76.18 Aligned_cols=105 Identities=17% Similarity=0.141 Sum_probs=73.7
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCCC----c-----ccccCHHHhhcCCCEEEEeccCChhhh
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGVS----Y-----PFYANVSGLAADSDVLIVCCALTEETH 214 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~~----~-----~~~~~l~e~l~~aDiV~~~lp~~~~t~ 214 (286)
++.|+++.|+|.|.+|++++..|...|+ +|++++|+.++... . ....+++++.+++|+|++++|......
T Consensus 123 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~~~ 202 (281)
T 3o8q_A 123 LLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDGE 202 (281)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC---
T ss_pred CccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCCCC
Confidence 4789999999999999999999999997 99999998754321 0 112355565578999999998753221
Q ss_pred -hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCe
Q 043239 215 -HMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 215 -~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i 254 (286)
..+.. +.++++.+++|+.-.. ..+. ++++.++.++
T Consensus 203 ~~~l~~---~~l~~~~~V~DlvY~P-~~T~-ll~~A~~~G~ 238 (281)
T 3o8q_A 203 LPAIDP---VIFSSRSVCYDMMYGK-GYTV-FNQWARQHGC 238 (281)
T ss_dssp -CSCCG---GGEEEEEEEEESCCCS-SCCH-HHHHHHHTTC
T ss_pred CCCCCH---HHhCcCCEEEEecCCC-ccCH-HHHHHHHCCC
Confidence 12332 3467899999998764 4444 4455555443
No 173
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=98.03 E-value=2.3e-05 Score=72.60 Aligned_cols=119 Identities=14% Similarity=0.193 Sum_probs=89.5
Q ss_pred CeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCC
Q 043239 93 GILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGC 172 (286)
Q Consensus 93 gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~ 172 (286)
+|++.|. +. .-+|=-+++.+++.+|- .|+.+...+|.|+|.|..|..+|+.+.++|.
T Consensus 156 ~ipvf~D-Di--qGTa~V~lAall~al~l--------------------~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga 212 (398)
T 2a9f_A 156 HIPVFHD-DQ--HGTAIVVLAAIFNSLKL--------------------LKKSLDEVSIVVNGGGSAGLSITRKLLAAGA 212 (398)
T ss_dssp SSCEEEH-HH--HHHHHHHHHHHHHHHHT--------------------TTCCTTSCEEEEECCSHHHHHHHHHHHHHTC
T ss_pred Ccceecc-hh--hhHHHHHHHHHHHHHHH--------------------hCCCCCccEEEEECCCHHHHHHHHHHHHcCC
Confidence 5888873 22 23444566666665552 3457889999999999999999999999999
Q ss_pred -EEEEECCCC-------CCCCCc-----------ccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEE
Q 043239 173 -SIAYTSRKK-------KPGVSY-----------PFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIIN 233 (286)
Q Consensus 173 -~V~~~~r~~-------~~~~~~-----------~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn 233 (286)
+|+++|++. ...... ....+|.|+++.+|+++-+- ..+++.+++++.|+++++++.
T Consensus 213 ~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~S-----apgl~T~EmVk~Ma~~pIIfa 287 (398)
T 2a9f_A 213 TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIGVS-----APGVLKAEWISKMAARPVIFA 287 (398)
T ss_dssp CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEECC-----STTCCCHHHHHTSCSSCEEEE
T ss_pred CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEecC-----CCCCCCHHHHHhhCCCCEEEE
Confidence 899999863 111111 11346999999999987652 368999999999999999999
Q ss_pred cCCCcc
Q 043239 234 VGRGAL 239 (286)
Q Consensus 234 ~srg~~ 239 (286)
+|+...
T Consensus 288 lsNPt~ 293 (398)
T 2a9f_A 288 MANPIP 293 (398)
T ss_dssp CCSSSC
T ss_pred CCCCCc
Confidence 998753
No 174
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.03 E-value=4.2e-06 Score=65.37 Aligned_cols=85 Identities=20% Similarity=0.263 Sum_probs=57.4
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------Cccc----ccCHH---Hh-hcCCCEEEEeccCChhh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------SYPF----YANVS---GL-AADSDVLIVCCALTEET 213 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~~~~----~~~l~---e~-l~~aDiV~~~lp~~~~t 213 (286)
+++|+|+|+|.+|+.+++.|...|++|++++++.+... +... ..+.+ +. +.++|+|++++|.....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 57999999999999999999999999999998754321 2111 11222 22 57899999998854332
Q ss_pred hhcccHHHHhcCCCCcEEEEc
Q 043239 214 HHMINKDVMTALGKEGVIINV 234 (286)
Q Consensus 214 ~~~i~~~~l~~mk~g~ilvn~ 234 (286)
. .-......++++.+++-+
T Consensus 84 ~--~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 84 L--MSSLLAKSYGINKTIARI 102 (140)
T ss_dssp H--HHHHHHHHTTCCCEEEEC
T ss_pred H--HHHHHHHHcCCCEEEEEe
Confidence 2 223445567777766644
No 175
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.03 E-value=4.2e-06 Score=75.97 Aligned_cols=115 Identities=13% Similarity=0.076 Sum_probs=84.3
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC--------------------C----------cccccCHHHhh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV--------------------S----------YPFYANVSGLA 197 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~--------------------~----------~~~~~~l~e~l 197 (286)
-.+|+|||.|.||..+|..+...|++|+.+|++++... + .....++.+.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 35899999999999999999999999999998764210 0 11246788899
Q ss_pred cCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCC
Q 043239 198 ADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTS 265 (286)
Q Consensus 198 ~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e 265 (286)
++||+|+=++|..-+.+.-+-++.=+.++++++|-.-+.+ +.-..+.+.+.. .=+..++=.|.+.
T Consensus 86 ~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~~-p~r~ig~HffNP~ 150 (319)
T 3ado_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVNPP 150 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECSST
T ss_pred ccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhccC-CCcEEEecCCCCc
Confidence 9999999999988887766666777778999987544333 556677776643 3344556566554
No 176
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=97.99 E-value=1.1e-06 Score=78.64 Aligned_cols=88 Identities=18% Similarity=0.178 Sum_probs=64.2
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cc---ccccCHHHhh-cCCCEEEEeccCChhhhhcccH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SY---PFYANVSGLA-ADSDVLIVCCALTEETHHMINK 219 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~---~~~~~l~e~l-~~aDiV~~~lp~~~~t~~~i~~ 219 (286)
++|+|||.|.||..+|..|...|++|.+++|+.+... +. ....+..+.+ ..+|+|++++|.. ++..++ +
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~-~~~~~l-~ 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH-QLDAVI-P 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG-GHHHHG-G
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc-CHHHHH-H
Confidence 5899999999999999999988999999999854211 11 0112334444 7899999999843 455554 3
Q ss_pred HHHhcCCCCcEEEEcCCCc
Q 043239 220 DVMTALGKEGVIINVGRGA 238 (286)
Q Consensus 220 ~~l~~mk~g~ilvn~srg~ 238 (286)
+..+.+++++++|.+..|=
T Consensus 81 ~l~~~l~~~~~iv~~~nGi 99 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNGY 99 (294)
T ss_dssp GHHHHEEEEEEEEECCSSC
T ss_pred HHHHhhCCCCEEEEeccCc
Confidence 4555677888999998884
No 177
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.99 E-value=1.3e-05 Score=72.83 Aligned_cols=83 Identities=14% Similarity=0.171 Sum_probs=64.3
Q ss_pred CCCEEEEEcCChHHHHHHHHhcc-CC-CEEEEECCCCCCCC-----------CcccccCHHHhhcCCCEEEEeccCChhh
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVP-FG-CSIAYTSRKKKPGV-----------SYPFYANVSGLAADSDVLIVCCALTEET 213 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~-~g-~~V~~~~r~~~~~~-----------~~~~~~~l~e~l~~aDiV~~~lp~~~~t 213 (286)
..++++|||+|.+|+.+++.|.. .+ .+|.+|+|+.++.. ... +.++++++ ++|+|++|+|..
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~--- 198 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSR--- 198 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCS---
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCC---
Confidence 35699999999999999998876 34 47999999876532 123 67889999 999999999864
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCC
Q 043239 214 HHMINKDVMTALGKEGVIINVGRG 237 (286)
Q Consensus 214 ~~~i~~~~l~~mk~g~ilvn~srg 237 (286)
..++.. ..+++|..+++++.-
T Consensus 199 ~pv~~~---~~l~~G~~V~~ig~~ 219 (322)
T 1omo_A 199 KPVVKA---EWVEEGTHINAIGAD 219 (322)
T ss_dssp SCCBCG---GGCCTTCEEEECSCC
T ss_pred CceecH---HHcCCCeEEEECCCC
Confidence 345543 467899999999643
No 178
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.99 E-value=2.4e-06 Score=75.73 Aligned_cols=105 Identities=12% Similarity=0.075 Sum_probs=69.3
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCCc---------ccccCHHHhhc-CCCEEEEeccCChhhh
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSY---------PFYANVSGLAA-DSDVLIVCCALTEETH 214 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~---------~~~~~l~e~l~-~aDiV~~~lp~~~~t~ 214 (286)
++.+++++|+|.|.+|++++..|...|.+|++++|+.++.... ....+++++.+ ++|+|++++|......
T Consensus 116 ~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~~~~ 195 (272)
T 1p77_A 116 LRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLSGG 195 (272)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC-----
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCCCCC
Confidence 4678999999999999999999999999999999986542210 01223444434 8999999998654321
Q ss_pred -hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 215 -HMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 215 -~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
.-+..+. ++++.+++|+......++.-+..+-+.|
T Consensus 196 ~~~i~~~~---l~~~~~v~D~~y~p~~~t~ll~~a~~~G 231 (272)
T 1p77_A 196 TASVDAEI---LKLGSAFYDMQYAKGTDTPFIALCKSLG 231 (272)
T ss_dssp --CCCHHH---HHHCSCEEESCCCTTSCCHHHHHHHHTT
T ss_pred CCCCCHHH---cCCCCEEEEeeCCCCcCCHHHHHHHHcC
Confidence 0133333 3578899999886654355443343433
No 179
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.97 E-value=5.8e-06 Score=74.75 Aligned_cols=100 Identities=11% Similarity=0.134 Sum_probs=68.5
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCCC-----------------cccccCHHHhhcCCCEEEEeccC
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGVS-----------------YPFYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~~-----------------~~~~~~l~e~l~~aDiV~~~lp~ 209 (286)
.++|+|||.|.||..+|..|...|+ +|..+|++.+.... .....++ +.+++||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4689999999999999999998888 99999998653221 1112456 678999999999842
Q ss_pred Ch-----------hhhhc---ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 043239 210 TE-----------ETHHM---INKDVMTALGKEGVIINVGRGALIDEKELVHFL 249 (286)
Q Consensus 210 ~~-----------~t~~~---i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al 249 (286)
.. .+..+ +-++.-+ ..+++++++++.+.-+....+.+..
T Consensus 83 p~~~g~~r~d~~~~~~~i~~~i~~~i~~-~~~~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 83 PGRPKDDRSELLFGNARILDSVAEGVKK-YCPNAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp SSCCSSCGGGGHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHhhHHHHHHHHHHHHH-HCCCcEEEEeCChHHHHHHHHHHhh
Confidence 11 11111 1122222 2468999999887666666666654
No 180
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.95 E-value=9.6e-06 Score=71.96 Aligned_cols=105 Identities=13% Similarity=0.141 Sum_probs=71.9
Q ss_pred ccCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCCC------c--ccccCHHHhh-cCCCEEEEeccCChhh
Q 043239 144 STLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGVS------Y--PFYANVSGLA-ADSDVLIVCCALTEET 213 (286)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~~------~--~~~~~l~e~l-~~aDiV~~~lp~~~~t 213 (286)
.++.|+++.|+|.|.+|++++..|...|+ +|++++|+.++... . ....+++++- .++|+|++++|..-..
T Consensus 116 ~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~~ 195 (272)
T 3pwz_A 116 EPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLTA 195 (272)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGGT
T ss_pred CCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCCC
Confidence 35789999999999999999999999996 99999998754321 0 1122344433 7899999999864321
Q ss_pred h-hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 214 H-HMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 214 ~-~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
. ..+.. +.++++.+++|+.-.. ..+.-|..|-+.|
T Consensus 196 ~~~~i~~---~~l~~~~~V~DlvY~P-~~T~ll~~A~~~G 231 (272)
T 3pwz_A 196 DLPPLPA---DVLGEAALAYELAYGK-GLTPFLRLAREQG 231 (272)
T ss_dssp CCCCCCG---GGGTTCSEEEESSCSC-CSCHHHHHHHHHS
T ss_pred CCCCCCH---HHhCcCCEEEEeecCC-CCCHHHHHHHHCC
Confidence 1 12333 3468999999997653 4455344444444
No 181
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.95 E-value=3e-06 Score=67.23 Aligned_cols=84 Identities=17% Similarity=0.131 Sum_probs=57.9
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cccc----ccC---HHHh-hcCCCEEEEeccCChhhh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPF----YAN---VSGL-AADSDVLIVCCALTEETH 214 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~----~~~---l~e~-l~~aDiV~~~lp~~~~t~ 214 (286)
..++.|+|+|.+|+.+|+.|...|++|++++++++... +... ..+ +.++ +.++|+|++++|....+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 35799999999999999999999999999999875421 2211 112 2222 578999999999765554
Q ss_pred hcccHHHHhcCCCCcEEEE
Q 043239 215 HMINKDVMTALGKEGVIIN 233 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~ilvn 233 (286)
.++ ..+..+.++..+|-
T Consensus 87 ~~~--~~a~~~~~~~~iia 103 (140)
T 3fwz_A 87 EIV--ASARAKNPDIEIIA 103 (140)
T ss_dssp HHH--HHHHHHCSSSEEEE
T ss_pred HHH--HHHHHHCCCCeEEE
Confidence 333 24444556655553
No 182
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.93 E-value=3.1e-05 Score=69.21 Aligned_cols=78 Identities=19% Similarity=0.397 Sum_probs=64.4
Q ss_pred cccCCCCEEEEEcCCh-HHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 143 GSTLGGKRVGIVGLGS-IGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~-iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
+.++.||++.|||-++ +|+++|..|...|+.|+..... ..++.+.+++||+|+.++. ..+++..+.
T Consensus 174 ~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~---------T~dl~~~~~~ADIvV~A~G----~p~~i~~d~ 240 (303)
T 4b4u_A 174 NIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSR---------TQNLPELVKQADIIVGAVG----KAELIQKDW 240 (303)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSSHHHHHHTCSEEEECSC----STTCBCGGG
T ss_pred CCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCC---------CCCHHHHhhcCCeEEeccC----CCCcccccc
Confidence 3469999999999776 6999999999999999876532 2479999999999999875 345777654
Q ss_pred HhcCCCCcEEEEcCC
Q 043239 222 MTALGKEGVIINVGR 236 (286)
Q Consensus 222 l~~mk~g~ilvn~sr 236 (286)
+|+|+++||+|-
T Consensus 241 ---vk~GavVIDVGi 252 (303)
T 4b4u_A 241 ---IKQGAVVVDAGF 252 (303)
T ss_dssp ---SCTTCEEEECCC
T ss_pred ---ccCCCEEEEece
Confidence 689999999974
No 183
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.92 E-value=1.5e-05 Score=70.42 Aligned_cols=105 Identities=12% Similarity=0.117 Sum_probs=70.6
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------Cc---ccccCHHHhh-cCCCEEEEeccCChhhh
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------SY---PFYANVSGLA-ADSDVLIVCCALTEETH 214 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~~---~~~~~l~e~l-~~aDiV~~~lp~~~~t~ 214 (286)
++.|+++.|+|.|.+|+++++.|...|.+|++++|+.++.. +. ....+++++. .++|+|+.++|......
T Consensus 116 ~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~~ 195 (271)
T 1nyt_A 116 IRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISGD 195 (271)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGTC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCCC
Confidence 36789999999999999999999999999999999865421 00 0112333433 58999999998654311
Q ss_pred -hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCe
Q 043239 215 -HMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 215 -~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i 254 (286)
.-+.. ..++++.+++|+.... ..+. +.++.++..+
T Consensus 196 ~~~i~~---~~l~~~~~v~D~~y~p-~~t~-~~~~a~~~G~ 231 (271)
T 1nyt_A 196 IPAIPS---SLIHPGIYCYDMFYQK-GKTP-FLAWCEQRGS 231 (271)
T ss_dssp CCCCCG---GGCCTTCEEEESCCCS-SCCH-HHHHHHHTTC
T ss_pred CCCCCH---HHcCCCCEEEEeccCC-cCCH-HHHHHHHcCC
Confidence 01222 2367899999998764 3333 4454454443
No 184
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.87 E-value=8.2e-06 Score=63.89 Aligned_cols=91 Identities=14% Similarity=0.210 Sum_probs=57.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC-----CCccc----ccC---HHHh-hcCCCEEEEeccCChh
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG-----VSYPF----YAN---VSGL-AADSDVLIVCCALTEE 212 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-----~~~~~----~~~---l~e~-l~~aDiV~~~lp~~~~ 212 (286)
+.+++|+|+|+|.+|+.+++.|...|++|++++++.+.. .+... ..+ +.++ +.++|+|+.+++...+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 567789999999999999999999999999998865321 11111 112 2333 6789999999986423
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCCc
Q 043239 213 THHMINKDVMTALGKEGVIINVGRGA 238 (286)
Q Consensus 213 t~~~i~~~~l~~mk~g~ilvn~srg~ 238 (286)
....+ ......+.+. .+|-.+++.
T Consensus 84 ~~~~~-~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 84 ASTLT-TLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp HHHHH-HHHHHHTTCS-EEEEECCSH
T ss_pred HHHHH-HHHHHHcCCC-eEEEEeCCH
Confidence 22122 2344556665 455444443
No 185
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.86 E-value=3.1e-05 Score=69.02 Aligned_cols=104 Identities=18% Similarity=0.183 Sum_probs=74.5
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCCC-------------ccc--ccCHHHhhcCCCEEEEecc
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGVS-------------YPF--YANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~~-------------~~~--~~~l~e~l~~aDiV~~~lp 208 (286)
++.|+++.|+|.|.+|++++..|...|. +|++++|+.++... ... ..++.+.++++|+|+.++|
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSS
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCC
Confidence 4789999999999999999999999999 79999998764320 111 2378888899999999998
Q ss_pred CChhhh--hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 209 LTEETH--HMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 209 ~~~~t~--~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
..-... ..+. .+.++++.+++|+.-.. ..+.-|.+|-+.|
T Consensus 204 ~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P-~~T~ll~~A~~~G 245 (283)
T 3jyo_A 204 MGMPAHPGTAFD---VSCLTKDHWVGDVVYMP-IETELLKAARALG 245 (283)
T ss_dssp TTSTTSCSCSSC---GGGCCTTCEEEECCCSS-SSCHHHHHHHHHT
T ss_pred CCCCCCCCCCCC---HHHhCCCCEEEEecCCC-CCCHHHHHHHHCc
Confidence 642211 1233 34578899999997654 3444444554444
No 186
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.86 E-value=3.7e-05 Score=72.49 Aligned_cols=106 Identities=14% Similarity=0.220 Sum_probs=77.8
Q ss_pred cccCCCCEEEEEcCChHHHHHHHHhccCCC---EEEEEC----CC--CCCC------CCc-----c------cccCHHHh
Q 043239 143 GSTLGGKRVGIVGLGSIGSEVAKRLVPFGC---SIAYTS----RK--KKPG------VSY-----P------FYANVSGL 196 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~---~V~~~~----r~--~~~~------~~~-----~------~~~~l~e~ 196 (286)
+.++.++++.|+|.|..|+.+++.|...|. +|+++| |+ ..+. ... . ...++.+.
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~ 260 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEA 260 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHH
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHH
Confidence 345788999999999999999999999998 799999 76 2211 110 0 13468889
Q ss_pred hcCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCC
Q 043239 197 AADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGS 253 (286)
Q Consensus 197 l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~ 253 (286)
++++|+|+.+.|.. .+++.++.++.|+++++++|++... .+.-+.+|.+.|.
T Consensus 261 l~~aDVlInaT~~~---~G~~~~e~v~~m~~~~iVfDLynP~--~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 261 LKDADVLISFTRPG---PGVIKPQWIEKMNEDAIVFPLANPV--PEILPEEAKKAGA 312 (439)
T ss_dssp HTTCSEEEECSCCC---SSSSCHHHHTTSCTTCEEEECCSSS--CSSCHHHHHHHTC
T ss_pred hccCCEEEEcCCCc---cCCCChHHHHhcCCCCEEEECCCCC--CcchHHHHHHcCC
Confidence 99999999998742 1456667788899999999996543 4444555555554
No 187
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.85 E-value=2.1e-05 Score=71.73 Aligned_cols=111 Identities=14% Similarity=0.082 Sum_probs=70.6
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCCC-----------------cccccCHHHhhcCCCEEEEec--
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGVS-----------------YPFYANVSGLAADSDVLIVCC-- 207 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~~-----------------~~~~~~l~e~l~~aDiV~~~l-- 207 (286)
.++|+|||.|.+|..+|..|...|+ +|..||++.+.... .....++++.+++||+|++++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~ 88 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL 88 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence 4689999999999999999998887 99999998753210 111367888899999999998
Q ss_pred cCChhh------hhc-------ccHHH---HhcCCCCcEEEEcCCCcccCHHHHHHHH--HhCCeeEEE
Q 043239 208 ALTEET------HHM-------INKDV---MTALGKEGVIINVGRGALIDEKELVHFL--VRGSLVELV 258 (286)
Q Consensus 208 p~~~~t------~~~-------i~~~~---l~~mk~g~ilvn~srg~~vd~~al~~al--~~~~i~ga~ 258 (286)
|..+.. +.- +-++. +....|.+++++++...=+....+.+.- ...++.|.+
T Consensus 89 p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~~t~~~~~~~~~~~~rviG~g 157 (331)
T 1pzg_A 89 TKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVMCEASGVPTNMICGMA 157 (331)
T ss_dssp SSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECC
T ss_pred CCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHHHHHHHHHhcCCChhcEEecc
Confidence 543221 110 01122 2223578999998655433333333332 233555543
No 188
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.82 E-value=3.2e-05 Score=69.19 Aligned_cols=103 Identities=17% Similarity=0.208 Sum_probs=70.7
Q ss_pred CCEEEEEcCChHHHH-HHHHhcc-CCCEEE-EECCCCCCCC------CcccccCHHHhhcCCCEEEEeccCChhhhhccc
Q 043239 148 GKRVGIVGLGSIGSE-VAKRLVP-FGCSIA-YTSRKKKPGV------SYPFYANVSGLAADSDVLIVCCALTEETHHMIN 218 (286)
Q Consensus 148 g~~vgIiG~G~iG~~-~A~~l~~-~g~~V~-~~~r~~~~~~------~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~ 218 (286)
..+|||||+|.||+. +++.+.. -+++++ +++++.++.. +...+.++++++++.|+|++|+|........
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~-- 83 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYEII-- 83 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHHHH--
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHHHH--
Confidence 368999999999996 8888876 467876 7898776432 3334789999999999999999954332221
Q ss_pred HHHHhcCCCCc-EEEE-cCCCcccCHHHHHHHHHhCCee
Q 043239 219 KDVMTALGKEG-VIIN-VGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 219 ~~~l~~mk~g~-ilvn-~srg~~vd~~al~~al~~~~i~ 255 (286)
... ++.|. +++. ...-++-+.+.|.++.++.++.
T Consensus 84 ~~a---l~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~ 119 (308)
T 3uuw_A 84 KIL---LNLGVHVYVDKPLASTVSQGEELIELSTKKNLN 119 (308)
T ss_dssp HHH---HHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCC
T ss_pred HHH---HHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCE
Confidence 223 33443 5554 2344556677788877776544
No 189
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.79 E-value=9.7e-06 Score=63.96 Aligned_cols=86 Identities=12% Similarity=0.125 Sum_probs=55.3
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Ccc----cccC---HHHh-hcCCCEEEEeccCChhh
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYP----FYAN---VSGL-AADSDVLIVCCALTEET 213 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~----~~~~---l~e~-l~~aDiV~~~lp~~~~t 213 (286)
.++++.|+|+|.+|+.+|+.|...|++|++++++++... +.. ...+ +.++ +.++|+|++++|..+.+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n 84 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFN 84 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHH
Confidence 457899999999999999999999999999998765321 111 0112 2222 46899999998843332
Q ss_pred hhcccHHHHhcCCCCcEEEEc
Q 043239 214 HHMINKDVMTALGKEGVIINV 234 (286)
Q Consensus 214 ~~~i~~~~l~~mk~g~ilvn~ 234 (286)
. .-......+....+++-+
T Consensus 85 ~--~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 85 L--KILKALRSVSDVYAIVRV 103 (141)
T ss_dssp H--HHHHHHHHHCCCCEEEEE
T ss_pred H--HHHHHHHHhCCceEEEEE
Confidence 2 223344444444454433
No 190
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.78 E-value=1.3e-05 Score=72.20 Aligned_cols=61 Identities=25% Similarity=0.403 Sum_probs=47.9
Q ss_pred CEEEEEcCChHHHHHHHHhccCC--CEEEEECCCCCCCC---------------Cccc-ccCHHHhhcCCCEEEEeccCC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFG--CSIAYTSRKKKPGV---------------SYPF-YANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g--~~V~~~~r~~~~~~---------------~~~~-~~~l~e~l~~aDiV~~~lp~~ 210 (286)
++|+|||.|.||..+|..|...| .+|..+|++.+... .... ..++ +.+++||+|++++|..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 58999999999999999998878 68999999764321 0111 2456 6789999999999854
No 191
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.78 E-value=4.2e-05 Score=69.20 Aligned_cols=105 Identities=15% Similarity=0.136 Sum_probs=70.7
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCC---CCC----------C--c--cccc---CHHHhhcCCCEE
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKK---PGV----------S--Y--PFYA---NVSGLAADSDVL 203 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~---~~~----------~--~--~~~~---~l~e~l~~aDiV 203 (286)
++.|+++.|+|.|.+|++++..|...|+ +|++++|+.+ +.. + . .... ++.+.+.++|+|
T Consensus 151 ~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI 230 (315)
T 3tnl_A 151 DIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF 230 (315)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred CccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence 5789999999999999999999999999 8999999832 211 0 0 1122 245677899999
Q ss_pred EEeccCChhhh---hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 204 IVCCALTEETH---HMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 204 ~~~lp~~~~t~---~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
|.++|..-... ..+. ....++++.+++|+.-... .+.=|.+|-+.|
T Consensus 231 INaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P~-~T~ll~~A~~~G 279 (315)
T 3tnl_A 231 TNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKPT-KTRLLEIAEEQG 279 (315)
T ss_dssp EECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSSS-SCHHHHHHHHTT
T ss_pred EECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCCC-CCHHHHHHHHCC
Confidence 99998542111 1121 2334688999999976543 444444444433
No 192
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.78 E-value=1.7e-05 Score=75.03 Aligned_cols=101 Identities=12% Similarity=0.103 Sum_probs=70.7
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC------------CC-------------cccccCHHHhhcCCC
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG------------VS-------------YPFYANVSGLAADSD 201 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~------------~~-------------~~~~~~l~e~l~~aD 201 (286)
+-.+|+|||+|-+|..+|..|...|++|+++|.++++. .+ .....+.++.+++||
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad 99 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATD 99 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCC
Confidence 45689999999999999999999999999999775431 01 112357788899999
Q ss_pred EEEEeccCChh------hhhcc--cHHHHhcCC---CCcEEEEcCCCcccCHHHHHH
Q 043239 202 VLIVCCALTEE------THHMI--NKDVMTALG---KEGVIINVGRGALIDEKELVH 247 (286)
Q Consensus 202 iV~~~lp~~~~------t~~~i--~~~~l~~mk---~g~ilvn~srg~~vd~~al~~ 247 (286)
++++|+|.... ...+. .+...+.|+ +|.++|.-|+-.+=.++.+..
T Consensus 100 ~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~ 156 (444)
T 3vtf_A 100 ATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVA 156 (444)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHH
T ss_pred ceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHH
Confidence 99999983211 11111 122334454 678999999887766655543
No 193
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.75 E-value=8.2e-05 Score=66.85 Aligned_cols=103 Identities=25% Similarity=0.312 Sum_probs=70.4
Q ss_pred CEEEEEcCChHHHH-HHHHhcc-CCCEEE-EECCCCCCCC------CcccccCHHHhhcCCCEEEEeccCChhhhhcccH
Q 043239 149 KRVGIVGLGSIGSE-VAKRLVP-FGCSIA-YTSRKKKPGV------SYPFYANVSGLAADSDVLIVCCALTEETHHMINK 219 (286)
Q Consensus 149 ~~vgIiG~G~iG~~-~A~~l~~-~g~~V~-~~~r~~~~~~------~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~ 219 (286)
.+|||||+|.||+. +++.+.. -+++++ +++++.+... +...+.+++++..++|+|++++|.......
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~~~---- 81 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFDV---- 81 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHHH----
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHHHH----
Confidence 58999999999997 8888765 367765 8898876532 233456777776789999999995433221
Q ss_pred HHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhCCeeE
Q 043239 220 DVMTALGKEG-VIINV-GRGALIDEKELVHFLVRGSLVE 256 (286)
Q Consensus 220 ~~l~~mk~g~-ilvn~-srg~~vd~~al~~al~~~~i~g 256 (286)
....++.|. +++.- ...++-+.+.|.++.++.++..
T Consensus 82 -~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~ 119 (319)
T 1tlt_A 82 -VSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTL 119 (319)
T ss_dssp -HHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCE
T ss_pred -HHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 222344564 66653 3345566778888888876653
No 194
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.74 E-value=2.8e-05 Score=69.30 Aligned_cols=103 Identities=15% Similarity=0.241 Sum_probs=70.6
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC----Cc--ccccCHHHhhcCCCEEEEeccCC--hhhh-
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV----SY--PFYANVSGLAADSDVLIVCCALT--EETH- 214 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~----~~--~~~~~l~e~l~~aDiV~~~lp~~--~~t~- 214 (286)
++.|+++.|+|.|.+|++++..|...|+ +|++++|+.++.. .. ..+.++.+ + ++|+||+++|.. +...
T Consensus 119 ~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~~ 196 (282)
T 3fbt_A 119 EIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEGE 196 (282)
T ss_dssp CCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTTC
T ss_pred CccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCcc
Confidence 4789999999999999999999999998 8999999876532 11 11233444 4 899999999864 2111
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCe
Q 043239 215 HMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i 254 (286)
..+..+. ++++.+++|+.-.. ..+. |+++.++.++
T Consensus 197 ~pi~~~~---l~~~~~v~DlvY~P-~~T~-ll~~A~~~G~ 231 (282)
T 3fbt_A 197 SPVDKEV---VAKFSSAVDLIYNP-VETL-FLKYARESGV 231 (282)
T ss_dssp CSSCHHH---HTTCSEEEESCCSS-SSCH-HHHHHHHTTC
T ss_pred CCCCHHH---cCCCCEEEEEeeCC-CCCH-HHHHHHHCcC
Confidence 1244444 46889999997544 2333 4444444443
No 195
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.74 E-value=9.4e-06 Score=72.33 Aligned_cols=105 Identities=14% Similarity=0.149 Sum_probs=71.6
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCCcc---------------cccCHHHhhcCCCEEEEeccC
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYP---------------FYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~---------------~~~~l~e~l~~aDiV~~~lp~ 209 (286)
++.|+++.|+|.|.||+++|+.|...| +|++++|+.++..... ...++.+.+.++|+|+++.|.
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~ 203 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI 203 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCC
Confidence 367899999999999999999999999 9999999764321100 112224567889999999886
Q ss_pred Chhhh---hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCe
Q 043239 210 TEETH---HMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 210 ~~~t~---~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i 254 (286)
..... ..+. ..+.++++.+++|+.... ..+ .+++..++.++
T Consensus 204 ~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~p-~~t-~ll~~a~~~G~ 247 (287)
T 1nvt_A 204 GMYPNIDVEPIV--KAEKLREDMVVMDLIYNP-LET-VLLKEAKKVNA 247 (287)
T ss_dssp TCTTCCSSCCSS--CSTTCCSSSEEEECCCSS-SSC-HHHHHHHTTTC
T ss_pred CCCCCCCCCCCC--CHHHcCCCCEEEEeeeCC-ccC-HHHHHHHHCCC
Confidence 53211 0120 134678999999998743 333 35555555544
No 196
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.70 E-value=6.3e-05 Score=68.39 Aligned_cols=108 Identities=15% Similarity=0.092 Sum_probs=68.1
Q ss_pred CEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCCC-----------------cccccCHHHhhcCCCEEEEec--c
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGVS-----------------YPFYANVSGLAADSDVLIVCC--A 208 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~~-----------------~~~~~~l~e~l~~aDiV~~~l--p 208 (286)
++|+|||.|.||..+|..+...|+ +|..+|++.+...+ .....++ +.+++||+|++++ |
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg~p 93 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAGVP 93 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 689999999999999999998898 99999998754221 1112466 7789999999998 4
Q ss_pred CChh---------hhhcc---cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHH--HhCCeeEEE
Q 043239 209 LTEE---------THHMI---NKDVMTALGKEGVIINVGRGALIDEKELVHFL--VRGSLVELV 258 (286)
Q Consensus 209 ~~~~---------t~~~i---~~~~l~~mk~g~ilvn~srg~~vd~~al~~al--~~~~i~ga~ 258 (286)
..+. +..++ .++.-+. .|++++++++...-+....+.+.- ...++.|.+
T Consensus 94 ~k~g~tr~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP~~~~t~~~~~~~~~~~~rviG~~ 156 (328)
T 2hjr_A 94 RKPNMTRSDLLTVNAKIVGSVAENVGKY-CPNAFVICITNPLDAMVYYFKEKSGIPANKVCGMS 156 (328)
T ss_dssp CCTTCCSGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEESC
T ss_pred CCCCCchhhHHhhhHHHHHHHHHHHHHH-CCCeEEEEecCchHHHHHHHHHhcCCChhhEEEeC
Confidence 3211 11111 1222222 478999888654322233332322 345666653
No 197
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.70 E-value=5.1e-05 Score=68.62 Aligned_cols=101 Identities=12% Similarity=0.181 Sum_probs=67.0
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEEE-EECCCCCCCC------CcccccCHHHhhc--CCCEEEEeccCChhhhhccc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSIA-YTSRKKKPGV------SYPFYANVSGLAA--DSDVLIVCCALTEETHHMIN 218 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V~-~~~r~~~~~~------~~~~~~~l~e~l~--~aDiV~~~lp~~~~t~~~i~ 218 (286)
.+|||||+|.||+.+++.+... +++++ ++|++.+... +.. +.+++++++ +.|+|++|+|........
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~~-- 80 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTHADLI-- 80 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGHHHHH--
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhHHHHH--
Confidence 5899999999999999999875 77876 6888765421 334 789999998 799999999854332221
Q ss_pred HHHHhcCCCC-cEEEEcC-CCcccCHHHHHHHHHhCCee
Q 043239 219 KDVMTALGKE-GVIINVG-RGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 219 ~~~l~~mk~g-~ilvn~s-rg~~vd~~al~~al~~~~i~ 255 (286)
... ++.| .+++.-- .-++-+.+.|.++.++.++.
T Consensus 81 ~~a---l~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (331)
T 4hkt_A 81 ERF---ARAGKAIFCEKPIDLDAERVRACLKVVSDTKAK 116 (331)
T ss_dssp HHH---HHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred HHH---HHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCe
Confidence 222 2333 2444322 33445556666666665543
No 198
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.70 E-value=9.7e-05 Score=64.39 Aligned_cols=81 Identities=16% Similarity=0.237 Sum_probs=56.5
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEE-EECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIA-YTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGK 227 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~-~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~ 227 (286)
++|+|+|+|.||+.+++.+...+.++. +++++.....++..+.++++++ ++|+++-+.+. ..+. +.+. ++.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~dl~~l~-~~DVvIDft~p-~a~~-----~~~~-l~~ 75 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVK-GADVAIDFSNP-NLLF-----PLLD-EDF 75 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC--CCSCBCSCTTTCT-TCSEEEECSCH-HHHH-----HHHT-SCC
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccccCCCceeCCHHHHh-CCCEEEEeCCh-HHHH-----HHHH-Hhc
Confidence 589999999999999999987765765 4788776555566678888888 99998744321 1222 2333 677
Q ss_pred CcEEEEcCCC
Q 043239 228 EGVIINVGRG 237 (286)
Q Consensus 228 g~ilvn~srg 237 (286)
|.-+|....|
T Consensus 76 g~~vVigTTG 85 (243)
T 3qy9_A 76 HLPLVVATTG 85 (243)
T ss_dssp CCCEEECCCS
T ss_pred CCceEeCCCC
Confidence 7666655566
No 199
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.69 E-value=5.5e-05 Score=68.76 Aligned_cols=101 Identities=11% Similarity=0.088 Sum_probs=66.5
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEEE-EECCCCCCC------CCcccccCHHHhhc--CCCEEEEeccCChhhhhccc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSIA-YTSRKKKPG------VSYPFYANVSGLAA--DSDVLIVCCALTEETHHMIN 218 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V~-~~~r~~~~~------~~~~~~~~l~e~l~--~aDiV~~~lp~~~~t~~~i~ 218 (286)
.+|||||+|.||+.+++.+... +++++ +++++.+.. .+...+.+++++++ +.|+|++|+|........
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~-- 82 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVDLI-- 82 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHHHH--
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHHHH--
Confidence 5899999999999999999876 67766 788876542 13445789999998 899999999854332221
Q ss_pred HHHHhcCCCC-cEEEEcC-CCcccCHHHHHHHHHhCCe
Q 043239 219 KDVMTALGKE-GVIINVG-RGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 219 ~~~l~~mk~g-~ilvn~s-rg~~vd~~al~~al~~~~i 254 (286)
...+ +.| .+++.-- .-.+-+.+.|.++.++.++
T Consensus 83 ~~al---~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~ 117 (344)
T 3euw_A 83 TRAV---ERGIPALCEKPIDLDIEMVRACKEKIGDGAS 117 (344)
T ss_dssp HHHH---HTTCCEEECSCSCSCHHHHHHHHHHHGGGGG
T ss_pred HHHH---HcCCcEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 2222 233 3554432 2333455556665555444
No 200
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.68 E-value=5.4e-05 Score=69.12 Aligned_cols=100 Identities=12% Similarity=0.135 Sum_probs=65.7
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEEE-EECCCCCCCC------CcccccCHHHhh--cCCCEEEEeccCChhhhhccc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSIA-YTSRKKKPGV------SYPFYANVSGLA--ADSDVLIVCCALTEETHHMIN 218 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V~-~~~r~~~~~~------~~~~~~~l~e~l--~~aDiV~~~lp~~~~t~~~i~ 218 (286)
.+|||||+|.||+.+++.++.. +++++ ++|++.+... +...+.++++++ .+.|+|++|+|........
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~-- 83 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAEVI-- 83 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHHHH--
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHHHH--
Confidence 5899999999999999999987 77865 7888765432 344578999999 5699999999965433221
Q ss_pred HHHHhcCCCCc-EEEEcC-CCcccCHHHHHHHHHhCC
Q 043239 219 KDVMTALGKEG-VIINVG-RGALIDEKELVHFLVRGS 253 (286)
Q Consensus 219 ~~~l~~mk~g~-ilvn~s-rg~~vd~~al~~al~~~~ 253 (286)
... ++.|. +++.-- .-++-+.+.|.++.++.+
T Consensus 84 ~~a---l~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~ 117 (354)
T 3db2_A 84 EQC---ARSGKHIYVEKPISVSLDHAQRIDQVIKETG 117 (354)
T ss_dssp HHH---HHTTCEEEEESSSCSSHHHHHHHHHHHHHHC
T ss_pred HHH---HHcCCEEEEccCCCCCHHHHHHHHHHHHHcC
Confidence 122 33332 444432 233344555555555433
No 201
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.67 E-value=0.00019 Score=62.79 Aligned_cols=101 Identities=15% Similarity=0.182 Sum_probs=71.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCCEE-EEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhc
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGCSI-AYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTA 224 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~~V-~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~ 224 (286)
-+.++|+++|+|.||+.+++. . ++++ .+|+ ......+.....+++++++++|+|+=|.+ .+ -+.+.....
T Consensus 10 ~~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~-~k~gelgv~a~~d~d~lla~pD~VVe~A~-~~----av~e~~~~i 80 (253)
T 1j5p_A 10 HHHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD-RISKDIPGVVRLDEFQVPSDVSTVVECAS-PE----AVKEYSLQI 80 (253)
T ss_dssp -CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC-SSCCCCSSSEECSSCCCCTTCCEEEECSC-HH----HHHHHHHHH
T ss_pred cccceEEEECcCHHHHHHHhc--C-CcEEEEEEe-ccccccCceeeCCHHHHhhCCCEEEECCC-HH----HHHHHHHHH
Confidence 357899999999999999998 3 7775 4666 21111144446789999889999977753 22 233345666
Q ss_pred CCCCcEEEEcCCCcccCH---HHHHHHHHhCCee
Q 043239 225 LGKEGVIINVGRGALIDE---KELVHFLVRGSLV 255 (286)
Q Consensus 225 mk~g~ilvn~srg~~vd~---~al~~al~~~~i~ 255 (286)
|+.|.-+|-+|-|.+.|. +.|.++.++|+-+
T Consensus 81 L~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~ 114 (253)
T 1j5p_A 81 LKNPVNYIIISTSAFADEVFRERFFSELKNSPAR 114 (253)
T ss_dssp TTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCE
T ss_pred HHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCe
Confidence 889999999999988887 5666677776654
No 202
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.66 E-value=2.7e-05 Score=69.96 Aligned_cols=101 Identities=21% Similarity=0.375 Sum_probs=63.9
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Ccccc---------cCH-HHhhcCCCEEEEeccCChhh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFY---------ANV-SGLAADSDVLIVCCALTEET 213 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~---------~~l-~e~l~~aDiV~~~lp~~~~t 213 (286)
++|+|||.|.||..+|..|. .|.+|.+++|+.+... +.... .+. .+....+|+|++++|.. ++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~-~~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQH-QL 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGG-GH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHH-HH
Confidence 68999999999999999999 8999999999864311 11100 000 24567899999999843 34
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 214 HHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 214 ~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
..++ +.+..+.++. +|.+..|=- .++.+.+.+...++.
T Consensus 81 ~~~l--~~l~~~~~~~-ivs~~nGi~-~~e~l~~~~~~~~vl 118 (307)
T 3ego_A 81 QSVF--SSLERIGKTN-ILFLQNGMG-HIHDLKDWHVGHSIY 118 (307)
T ss_dssp HHHH--HHTTSSCCCE-EEECCSSSH-HHHHHHTCCCSCEEE
T ss_pred HHHH--HHhhcCCCCe-EEEecCCcc-HHHHHHHhCCCCcEE
Confidence 4333 2233345566 888877732 223344444444443
No 203
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.65 E-value=6.6e-05 Score=67.66 Aligned_cols=101 Identities=13% Similarity=0.180 Sum_probs=63.5
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEEE-EECCCCCCCC------Cc-ccccCHHHhh-cCCCEEEEeccCChhhhhccc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSIA-YTSRKKKPGV------SY-PFYANVSGLA-ADSDVLIVCCALTEETHHMIN 218 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V~-~~~r~~~~~~------~~-~~~~~l~e~l-~~aDiV~~~lp~~~~t~~~i~ 218 (286)
.+|||||+|.||+.+++.+... +++++ +++++.++.. +. ..+.++++++ .+.|+|++++|...... +
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~-~-- 78 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLHFA-Q-- 78 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGHHH-H--
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHHHH-H--
Confidence 4899999999999999999876 56764 7888765321 22 3467899999 78999999998543211 1
Q ss_pred HHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhCCe
Q 043239 219 KDVMTALGKEG-VIINV-GRGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 219 ~~~l~~mk~g~-ilvn~-srg~~vd~~al~~al~~~~i 254 (286)
....++.|. +++.- ..-++-+.+.|.++.++.++
T Consensus 79 --~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~ 114 (325)
T 2ho3_A 79 --AKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNC 114 (325)
T ss_dssp --HHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTC
T ss_pred --HHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHcCC
Confidence 112233343 45442 12233444555555555443
No 204
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.65 E-value=3.5e-05 Score=69.78 Aligned_cols=107 Identities=20% Similarity=0.275 Sum_probs=67.4
Q ss_pred CEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCCC--------------cc-cccCHHHhhcCCCEEEEeccCCh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGVS--------------YP-FYANVSGLAADSDVLIVCCALTE 211 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~~--------------~~-~~~~l~e~l~~aDiV~~~lp~~~ 211 (286)
++|+|||.|.||..+|..|...|+ +|..+|++.+.... .. ...+ .+.+++||+|++++|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 489999999999999999998888 99999997543211 01 1124 356789999999998543
Q ss_pred hh---h--------hcccHHHHhcC---CCCcEEEEcCCCcccCHHHHHHHH--HhCCeeEE
Q 043239 212 ET---H--------HMINKDVMTAL---GKEGVIINVGRGALIDEKELVHFL--VRGSLVEL 257 (286)
Q Consensus 212 ~t---~--------~~i~~~~l~~m---k~g~ilvn~srg~~vd~~al~~al--~~~~i~ga 257 (286)
.. + .++ ++.+..+ .|++++|+++.+.-+.+..+.+.. ...++.|.
T Consensus 80 ~~g~~r~dl~~~n~~i~-~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~~~~~~~~~~rviG~ 140 (319)
T 1a5z_A 80 KPGETRLQLLGRNARVM-KEIARNVSKYAPDSIVIVVTNPVDVLTYFFLKESGMDPRKVFGS 140 (319)
T ss_dssp CSSCCHHHHHHHHHHHH-HHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred CCCCCHHHHHHHHHHHH-HHHHHHHHhhCCCeEEEEeCCcHHHHHHHHHHHhCCChhhEEee
Confidence 10 0 111 2222222 578888888665433333333332 34456554
No 205
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.64 E-value=4.8e-05 Score=69.48 Aligned_cols=63 Identities=17% Similarity=0.168 Sum_probs=51.2
Q ss_pred CCEEEEEcCChHHHHHHHHhccC--CCEEE-EECCCCCCCC------CcccccCHHHhhc--CCCEEEEeccCC
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPF--GCSIA-YTSRKKKPGV------SYPFYANVSGLAA--DSDVLIVCCALT 210 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~--g~~V~-~~~r~~~~~~------~~~~~~~l~e~l~--~aDiV~~~lp~~ 210 (286)
..+|||||+|.||+..++.+... +++++ ++|++.++.. +...+.+++++++ +.|+|++|+|..
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 86 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSG 86 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGG
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcH
Confidence 46899999999999999999876 77865 7888765432 3445789999997 799999999954
No 206
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.63 E-value=8.3e-05 Score=67.44 Aligned_cols=58 Identities=22% Similarity=0.200 Sum_probs=46.7
Q ss_pred CEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC---------------C--cccccCHHHhhcCCCEEEEec
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV---------------S--YPFYANVSGLAADSDVLIVCC 207 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~---------------~--~~~~~~l~e~l~~aDiV~~~l 207 (286)
++|+|||.|.||..+|..+...|+ +|..+|++.+... . .....+. +.+++||+|++++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 589999999999999999998888 8999998765321 1 1112566 7789999999998
No 207
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.63 E-value=6.6e-05 Score=67.70 Aligned_cols=102 Identities=20% Similarity=0.238 Sum_probs=65.4
Q ss_pred CEEEEEcCChHHHHH-HHHhccCCCEEE-EECCCCCCCC------Cc-ccccCHHHhhc--CCCEEEEeccCChhhhhcc
Q 043239 149 KRVGIVGLGSIGSEV-AKRLVPFGCSIA-YTSRKKKPGV------SY-PFYANVSGLAA--DSDVLIVCCALTEETHHMI 217 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~-A~~l~~~g~~V~-~~~r~~~~~~------~~-~~~~~l~e~l~--~aDiV~~~lp~~~~t~~~i 217 (286)
.+|||||+|.||+.+ ++.+...+++++ +++++.++.. +. ..+.+++++++ ++|+|++++|......
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~--- 77 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHRE--- 77 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHH---
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHH---
Confidence 379999999999998 777766678865 7888765421 22 24678999987 4999999998443221
Q ss_pred cHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhCCee
Q 043239 218 NKDVMTALGKEG-VIINV-GRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 218 ~~~~l~~mk~g~-ilvn~-srg~~vd~~al~~al~~~~i~ 255 (286)
.....++.|. +++.- ...+.-+.+.|.++.++.++.
T Consensus 78 --~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~ 115 (332)
T 2glx_A 78 --QTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVV 115 (332)
T ss_dssp --HHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCC
T ss_pred --HHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCE
Confidence 1222344554 55542 223444556666666655444
No 208
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.62 E-value=3.6e-05 Score=69.18 Aligned_cols=102 Identities=10% Similarity=0.206 Sum_probs=68.6
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEE-EEECCCCCCCC----CcccccCHHHhhc--CCCEEEEeccCChhhhhcccHH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSI-AYTSRKKKPGV----SYPFYANVSGLAA--DSDVLIVCCALTEETHHMINKD 220 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V-~~~~r~~~~~~----~~~~~~~l~e~l~--~aDiV~~~lp~~~~t~~~i~~~ 220 (286)
.+|||||+|.||+.+++.+... ++++ .+++++.++.. ....+.+++++++ ++|+|++++|...... -
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~-----~ 85 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPGCVIESDWRSVVSAPEVEAVIIATPPATHAE-----I 85 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTTCEEESSTHHHHTCTTCCEEEEESCGGGHHH-----H
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhhCcccCCHHHHhhCCCCCEEEEeCChHHHHH-----H
Confidence 5899999999999999999875 5675 47888764322 1234678899985 7999999998543222 1
Q ss_pred HHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhCCee
Q 043239 221 VMTALGKEG-VIINV-GRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 221 ~l~~mk~g~-ilvn~-srg~~vd~~al~~al~~~~i~ 255 (286)
....++.|. +++.- ..-++-+.+.|.++.++.++.
T Consensus 86 ~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 122 (315)
T 3c1a_A 86 TLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVM 122 (315)
T ss_dssp HHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCE
Confidence 223345564 66662 233455667788877765554
No 209
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.61 E-value=0.00023 Score=64.27 Aligned_cols=103 Identities=16% Similarity=0.158 Sum_probs=65.6
Q ss_pred CCEEEEEcCChHHHHHHHHhccC-CCEEE-EECCCCCCCC------Cc-ccccCHHHhhc--CCCEEEEeccCChhhhhc
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPF-GCSIA-YTSRKKKPGV------SY-PFYANVSGLAA--DSDVLIVCCALTEETHHM 216 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~-g~~V~-~~~r~~~~~~------~~-~~~~~l~e~l~--~aDiV~~~lp~~~~t~~~ 216 (286)
-.+|||||+|.||+.+++.++.. +++++ +++++.++.. +. ..+.+++++++ +.|+|++++|.......
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~- 83 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKV- 83 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHHH-
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHH-
Confidence 35899999999999999988765 45654 6788876543 22 24689999998 79999999985433221
Q ss_pred ccHHHHhcCCCC-cEEEEcC-CCcccCHHHHHHHHHhCCee
Q 043239 217 INKDVMTALGKE-GVIINVG-RGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 217 i~~~~l~~mk~g-~ilvn~s-rg~~vd~~al~~al~~~~i~ 255 (286)
....++.| .+++.-- .-++-+.+.|.++.++.++.
T Consensus 84 ----~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~ 120 (329)
T 3evn_A 84 ----AKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLF 120 (329)
T ss_dssp ----HHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCC
T ss_pred ----HHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCE
Confidence 11223333 2444322 23344555566666555443
No 210
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.58 E-value=7.5e-05 Score=67.27 Aligned_cols=60 Identities=18% Similarity=0.316 Sum_probs=46.7
Q ss_pred CEEEEEcCChHHHHHHHHhcc--CCCEEEEECCCCCCCCC-----------------cccccCHHHhhcCCCEEEEeccC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVP--FGCSIAYTSRKKKPGVS-----------------YPFYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~--~g~~V~~~~r~~~~~~~-----------------~~~~~~l~e~l~~aDiV~~~lp~ 209 (286)
++|+|||.|.||..+|..|.. .|.+|..+|++.+...+ .....+.++ +++||+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 489999999999999999986 47899999998653210 111246666 8999999999974
No 211
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.57 E-value=0.00012 Score=66.15 Aligned_cols=103 Identities=15% Similarity=0.131 Sum_probs=67.9
Q ss_pred CCEEEEEcCChHHHHHHHHhccC-CCEEE-EECCCCCCCC------Cc-ccccCHHHhhc--CCCEEEEeccCChhhhhc
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPF-GCSIA-YTSRKKKPGV------SY-PFYANVSGLAA--DSDVLIVCCALTEETHHM 216 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~-g~~V~-~~~r~~~~~~------~~-~~~~~l~e~l~--~aDiV~~~lp~~~~t~~~ 216 (286)
..+|||||+|.||+.+++.++.. +++|+ +++++.++.. +. ..+.+++++++ +.|+|++++|........
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 84 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHYSAA 84 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHHHHH
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHHHHH
Confidence 35899999999999999999875 66776 6788765422 33 35789999997 799999999955332211
Q ss_pred ccHHHHhcCCCC-cEEEEcC-CCcccCHHHHHHHHHhCCee
Q 043239 217 INKDVMTALGKE-GVIINVG-RGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 217 i~~~~l~~mk~g-~ilvn~s-rg~~vd~~al~~al~~~~i~ 255 (286)
... ++.| .+++.-- .-++-+.+.|.++.++.++.
T Consensus 85 --~~a---l~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~ 120 (330)
T 3e9m_A 85 --KLA---LSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVF 120 (330)
T ss_dssp --HHH---HHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCC
T ss_pred --HHH---HHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 222 2333 3454432 33445556666666665543
No 212
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.57 E-value=5.4e-05 Score=68.07 Aligned_cols=107 Identities=17% Similarity=0.258 Sum_probs=68.1
Q ss_pred CEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCC--------C------ccc-ccCHHHhhcCCCEEEEeccCCh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGV--------S------YPF-YANVSGLAADSDVLIVCCALTE 211 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~--------~------~~~-~~~l~e~l~~aDiV~~~lp~~~ 211 (286)
++|+|||.|.||..+|..|...|+ +|..+|++.+... . ... ..+ .+.+++||+|+++++...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVILTAGANQ 79 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEECC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEEcCCCCC
Confidence 489999999999999999998898 9999998764211 0 011 123 357899999999985322
Q ss_pred h-----------hhhcccHH---HHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEE
Q 043239 212 E-----------THHMINKD---VMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVEL 257 (286)
Q Consensus 212 ~-----------t~~~i~~~---~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga 257 (286)
. +..++ ++ .+....|++++++++.+.-+....+.+.....++.|.
T Consensus 80 ~~g~~r~dl~~~n~~i~-~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 80 KPGESRLDLLEKNADIF-RELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp --------CHHHHHHHH-HHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCCcHHHHHHhHHHHH-HHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 1 11111 11 2222358899999877654545555555555566544
No 213
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.57 E-value=0.00013 Score=66.30 Aligned_cols=101 Identities=17% Similarity=0.267 Sum_probs=66.3
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEEE-EECCCCCCCC------Cc-ccccCHHHhhc--CCCEEEEeccCChhhhhcc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSIA-YTSRKKKPGV------SY-PFYANVSGLAA--DSDVLIVCCALTEETHHMI 217 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V~-~~~r~~~~~~------~~-~~~~~l~e~l~--~aDiV~~~lp~~~~t~~~i 217 (286)
.+|||||+|.||+.+++.+... +++++ ++|++.+... +. ..+.+++++++ ++|+|++|+|........
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~- 81 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSELV- 81 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHH-
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcchHHHH-
Confidence 4899999999999999999875 67765 6888765432 22 25789999998 799999999854332211
Q ss_pred cHHHHhcCCCCc-EEEEcC-CCcccCHHHHHHHHHhCCe
Q 043239 218 NKDVMTALGKEG-VIINVG-RGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 218 ~~~~l~~mk~g~-ilvn~s-rg~~vd~~al~~al~~~~i 254 (286)
... ++.|. +++.-- .-++-+.+.|.++.++.++
T Consensus 82 -~~a---l~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~ 116 (344)
T 3ezy_A 82 -IAC---AKAKKHVFCEKPLSLNLADVDRMIEETKKADV 116 (344)
T ss_dssp -HHH---HHTTCEEEEESCSCSCHHHHHHHHHHHHHHTC
T ss_pred -HHH---HhcCCeEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 222 33343 555432 3344455666666655443
No 214
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.56 E-value=0.00012 Score=64.87 Aligned_cols=102 Identities=14% Similarity=0.257 Sum_probs=69.4
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC------CcccccCHHHhhcCCCEEEEeccCChhhh-----
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV------SYPFYANVSGLAADSDVLIVCCALTEETH----- 214 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~------~~~~~~~l~e~l~~aDiV~~~lp~~~~t~----- 214 (286)
.++++.|+|.|.+|++++..|...|+ +|++++|+.++.. +.....++. +.++|+|++++|......
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm~~~~~~~~ 195 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGMKGGKEEMD 195 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTCTTSTTTTS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCccCccccCC
Confidence 46789999999999999999999998 7999999865432 111111222 468999999999653211
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 215 HMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
..+..+. ++++.+++|+.-.. .++ .|+++.++.++.
T Consensus 196 ~~~~~~~---l~~~~~v~DlvY~P-~~T-~ll~~A~~~G~~ 231 (271)
T 1npy_A 196 LAFPKAF---IDNASVAFDVVAMP-VET-PFIRYAQARGKQ 231 (271)
T ss_dssp CSSCHHH---HHHCSEEEECCCSS-SSC-HHHHHHHHTTCE
T ss_pred CCCCHHH---cCCCCEEEEeecCC-CCC-HHHHHHHHCCCE
Confidence 1133333 35688999998744 344 566666665554
No 215
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.54 E-value=0.00013 Score=65.72 Aligned_cols=102 Identities=11% Similarity=0.132 Sum_probs=65.6
Q ss_pred CEEEEEcCChHHH-HHHHHhccC-CCEEEEECCCCCCCC------Cccc-ccCHHHhh-cCCCEEEEeccCChhhhhccc
Q 043239 149 KRVGIVGLGSIGS-EVAKRLVPF-GCSIAYTSRKKKPGV------SYPF-YANVSGLA-ADSDVLIVCCALTEETHHMIN 218 (286)
Q Consensus 149 ~~vgIiG~G~iG~-~~A~~l~~~-g~~V~~~~r~~~~~~------~~~~-~~~l~e~l-~~aDiV~~~lp~~~~t~~~i~ 218 (286)
.+|||||+|.||+ .+++.+... ++++++++++.++.. +... +.+..+++ .++|+|++++|...... +
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~-~-- 79 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHST-L-- 79 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHHH-H--
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHHH-H--
Confidence 4899999999999 499988765 678778998765421 2222 33445556 68999999998432211 1
Q ss_pred HHHHhcCCCC-cEEEEc-CCCcccCHHHHHHHHHhCCee
Q 043239 219 KDVMTALGKE-GVIINV-GRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 219 ~~~l~~mk~g-~ilvn~-srg~~vd~~al~~al~~~~i~ 255 (286)
....++.| .+++.- ..-++-+.+.|.++.++.++.
T Consensus 80 --~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (323)
T 1xea_A 80 --AAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 116 (323)
T ss_dssp --HHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred --HHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCe
Confidence 12234445 366653 223445667788887776655
No 216
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.52 E-value=0.00025 Score=64.12 Aligned_cols=100 Identities=19% Similarity=0.233 Sum_probs=66.1
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEE-EEECCCCCCCC--CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSI-AYTSRKKKPGV--SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTA 224 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V-~~~~r~~~~~~--~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~ 224 (286)
.+|+|||+|+||+.+++.+... ++++ .+++++..... +...+.++++++.++|+|++++|..... +.....
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~~~~gv~~~~d~~~ll~~~DvViiatp~~~h~-----~~~~~a 78 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTKTPVFDVADVDKHADDVDVLFLCMGSATDI-----PEQAPK 78 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSSSCEEEGGGGGGTTTTCSEEEECSCTTTHH-----HHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHhhcCCCceeCCHHHHhcCCCEEEEcCCcHHHH-----HHHHHH
Confidence 4899999999999999999876 5675 47787754421 2223467888888899999999854221 223445
Q ss_pred CCCCcEEEEcCCCcc--cCH-HHHHHHHHhCC
Q 043239 225 LGKEGVIINVGRGAL--IDE-KELVHFLVRGS 253 (286)
Q Consensus 225 mk~g~ilvn~srg~~--vd~-~al~~al~~~~ 253 (286)
++.|.-+|...-..+ -+. +.|.++.+++.
T Consensus 79 l~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 79 FAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp HTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 666776665544332 223 45666666654
No 217
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.52 E-value=0.00017 Score=56.12 Aligned_cols=102 Identities=20% Similarity=0.256 Sum_probs=75.8
Q ss_pred CEEEEEcC----ChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhc
Q 043239 149 KRVGIVGL----GSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTA 224 (286)
Q Consensus 149 ~~vgIiG~----G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~ 224 (286)
++|+|||. |..|..+.+.|+..|++|+-.++......+...+.++.++-. -|++++++|. +.+..++.+ ...
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~-vDlavi~~p~-~~v~~~v~e-~~~- 80 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEG-VDTVTLYINP-QNQLSEYNY-ILS- 80 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTT-CCEEEECSCH-HHHGGGHHH-HHH-
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCC-CCEEEEEeCH-HHHHHHHHH-HHh-
Confidence 58999997 568999999999999999999988766667667788888877 9999999983 455555543 322
Q ss_pred CCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEE
Q 043239 225 LGKEGVIINVGRGALIDEKELVHFLVRGSLVELV 258 (286)
Q Consensus 225 mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~ 258 (286)
+...+++++.+. .++++.+.+++..++-..
T Consensus 81 ~g~k~v~~~~G~----~~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 81 LKPKRVIFNPGT----ENEELEEILSENGIEPVI 110 (122)
T ss_dssp HCCSEEEECTTC----CCHHHHHHHHHTTCEEEE
T ss_pred cCCCEEEECCCC----ChHHHHHHHHHcCCeEEC
Confidence 334466665432 357888888888887543
No 218
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.51 E-value=0.00033 Score=62.45 Aligned_cols=105 Identities=17% Similarity=0.253 Sum_probs=70.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHhccCCCEEE-EECCCCC--CCCCcccccCHHHhhc--CCCEEEEeccCChhhhhcccHHH
Q 043239 148 GKRVGIVGL-GSIGSEVAKRLVPFGCSIA-YTSRKKK--PGVSYPFYANVSGLAA--DSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 148 g~~vgIiG~-G~iG~~~A~~l~~~g~~V~-~~~r~~~--~~~~~~~~~~l~e~l~--~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
..+|+|+|+ |.||+.+++.+...|++++ .+++... ...+...+.+++++.. ..|++++++|.. .....+. +.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~~~~G~~vy~sl~el~~~~~~D~viI~tP~~-~~~~~~~-ea 84 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAP-FCKDSIL-EA 84 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCGG-GHHHHHH-HH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccceeCCeeccCCHHHHhhcCCCCEEEEecCHH-HHHHHHH-HH
Confidence 468999999 9999999999998888854 5676532 2234556789999988 899999999843 3333332 23
Q ss_pred HhcCCCCcEEEEcCCCc-ccCHHHHHHHHHhCCeeE
Q 043239 222 MTALGKEGVIINVGRGA-LIDEKELVHFLVRGSLVE 256 (286)
Q Consensus 222 l~~mk~g~ilvn~srg~-~vd~~al~~al~~~~i~g 256 (286)
++. .. ..+|..+.|- .-+.+.|.++.++..++-
T Consensus 85 ~~~-Gi-~~iVi~t~G~~~~~~~~l~~~A~~~gv~l 118 (288)
T 2nu8_A 85 IDA-GI-KLIITITEGIPTLDMLTVKVKLDEAGVRM 118 (288)
T ss_dssp HHT-TC-SEEEECCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred HHC-CC-CEEEEECCCCCHHHHHHHHHHHHHcCCEE
Confidence 321 22 2345555553 334568888888877653
No 219
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.51 E-value=0.00026 Score=63.51 Aligned_cols=101 Identities=21% Similarity=0.200 Sum_probs=63.3
Q ss_pred CCEEEEEcCChHHHHHHHHhccC-CCEEE-EECCCCCCCC--Cc--ccccCHHHhhcCCCEEEEeccCChhhhhcccHHH
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPF-GCSIA-YTSRKKKPGV--SY--PFYANVSGLAADSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~-g~~V~-~~~r~~~~~~--~~--~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
-.+|||||+|.||+.+++.++.. ++++. ++++++++.. +. ..+.++.+. .++|+|++|+|..... +..
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~~g~~~~~~~~l~~~-~~~DvViiatp~~~h~-----~~~ 82 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPFELQPFRVVSDIEQL-ESVDVALVCSPSREVE-----RTA 82 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-------CCTTSCEESSGGGS-SSCCEEEECSCHHHHH-----HHH
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHcCCCcCCHHHHHhC-CCCCEEEECCCchhhH-----HHH
Confidence 35899999999999999998864 67876 6888776542 21 124455555 7899999999843222 223
Q ss_pred HhcCCCCcEEEEcCC--C-cccCHHHHHHHHHhCCe
Q 043239 222 MTALGKEGVIINVGR--G-ALIDEKELVHFLVRGSL 254 (286)
Q Consensus 222 l~~mk~g~ilvn~sr--g-~~vd~~al~~al~~~~i 254 (286)
...++.|.-+++..- + .+.+.+.|.++.++.+.
T Consensus 83 ~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~ 118 (304)
T 3bio_A 83 LEILKKGICTADSFDIHDGILALRRSLGDAAGKSGA 118 (304)
T ss_dssp HHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCC
Confidence 344566777776532 2 33455677777776553
No 220
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.50 E-value=0.00013 Score=66.10 Aligned_cols=103 Identities=17% Similarity=0.224 Sum_probs=66.7
Q ss_pred CCEEEEEcCChHHHHHHHHhc-c-CCCEE-EEECCCCCCC------CCc-ccccCHHHhhc--CCCEEEEeccCChhhhh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLV-P-FGCSI-AYTSRKKKPG------VSY-PFYANVSGLAA--DSDVLIVCCALTEETHH 215 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~-~-~g~~V-~~~~r~~~~~------~~~-~~~~~l~e~l~--~aDiV~~~lp~~~~t~~ 215 (286)
-.+|||||+|.||+.+++.++ . -++++ .+++++.++. .+. ..+.+++++++ ++|+|++++|......
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~- 86 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPE- 86 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHHH-
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHHH-
Confidence 358999999999999999987 5 47775 5788876542 133 34678999986 6999999998543222
Q ss_pred cccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhC-Cee
Q 043239 216 MINKDVMTALGKEG-VIINV-GRGALIDEKELVHFLVRG-SLV 255 (286)
Q Consensus 216 ~i~~~~l~~mk~g~-ilvn~-srg~~vd~~al~~al~~~-~i~ 255 (286)
.....++.|. +++.- ....+-+.+.|.++.++. ++.
T Consensus 87 ----~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~ 125 (346)
T 3cea_A 87 ----MTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQI 125 (346)
T ss_dssp ----HHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSC
T ss_pred ----HHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCe
Confidence 1223344564 44432 122333445677777766 554
No 221
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.50 E-value=0.00011 Score=67.53 Aligned_cols=63 Identities=14% Similarity=0.129 Sum_probs=47.8
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----------CcccccCHHHhhcCCCEEEEeccCC
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----------SYPFYANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----------~~~~~~~l~e~l~~aDiV~~~lp~~ 210 (286)
+.++|+|+|.|.+|+.+|+.|+. ..+|.+.+++.+... ......++.++++++|+|++++|..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred CccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 45689999999999999999986 578988887654321 1112345778899999999999854
No 222
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.49 E-value=0.00022 Score=64.36 Aligned_cols=104 Identities=18% Similarity=0.203 Sum_probs=70.8
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCC---CC----------Cc----ccccCH---HHhhcCCCEE
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKP---GV----------SY----PFYANV---SGLAADSDVL 203 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~---~~----------~~----~~~~~l---~e~l~~aDiV 203 (286)
++.|+++.|+|.|.+|++++..|...|. +|++++|+.+. .. +. ....++ .+.+.++|+|
T Consensus 145 ~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI 224 (312)
T 3t4e_A 145 DMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL 224 (312)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred CcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence 4789999999999999999999999998 89999998332 11 00 112343 5668899999
Q ss_pred EEeccCChh--hh-hcc-cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 204 IVCCALTEE--TH-HMI-NKDVMTALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 204 ~~~lp~~~~--t~-~~i-~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
|.++|..-. .. .++ + ...++++.+++|+--.. ..+.=|..|-+.|
T Consensus 225 INaTp~Gm~~~~~~~~~~~---~~~l~~~~~v~D~vY~P-~~T~ll~~A~~~G 273 (312)
T 3t4e_A 225 TNGTKVGMKPLENESLIGD---VSLLRPELLVTECVYNP-HMTKLLQQAQQAG 273 (312)
T ss_dssp EECSSTTSTTSTTCCSCCC---GGGSCTTCEEEECCCSS-SSCHHHHHHHHTT
T ss_pred EECCcCCCCCCCCCcccCC---HHHcCCCCEEEEeccCC-CCCHHHHHHHHCC
Confidence 999986521 11 111 2 23467899999997654 3444444444443
No 223
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.46 E-value=0.00017 Score=66.05 Aligned_cols=64 Identities=14% Similarity=0.166 Sum_probs=50.9
Q ss_pred CCEEEEEcCChHHHHHHHHhccC-CCEEE-EECCCCCCC-----CCcccccCHHHhhc--CCCEEEEeccCCh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPF-GCSIA-YTSRKKKPG-----VSYPFYANVSGLAA--DSDVLIVCCALTE 211 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~-g~~V~-~~~r~~~~~-----~~~~~~~~l~e~l~--~aDiV~~~lp~~~ 211 (286)
..+|||||+|.||+..++.+... ++++. +++++.++. .+...+.+++++++ +.|+|++|+|...
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDS 77 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGG
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 35899999999999999999876 67875 678876542 24456789999997 7899999998543
No 224
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.45 E-value=0.00029 Score=56.23 Aligned_cols=84 Identities=6% Similarity=-0.010 Sum_probs=55.3
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCC----C-----CCCcc-------cccCHHHh-hcCCCEEEEeccCC
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKK----P-----GVSYP-------FYANVSGL-AADSDVLIVCCALT 210 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~----~-----~~~~~-------~~~~l~e~-l~~aDiV~~~lp~~ 210 (286)
++++.|+|+|.+|+.+++.|...|++|++.+++.. . ..+.. ....+.++ +.++|.|+++++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 46799999999999999999999999999998641 0 11111 11234454 78999999998865
Q ss_pred hhhhhcccHHHHhcCCCCcEEEE
Q 043239 211 EETHHMINKDVMTALGKEGVIIN 233 (286)
Q Consensus 211 ~~t~~~i~~~~l~~mk~g~ilvn 233 (286)
+.+. .-......+.+...+|.
T Consensus 83 ~~n~--~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 83 ADNA--FVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp HHHH--HHHHHHHHHTSSSCEEE
T ss_pred HHHH--HHHHHHHHHCCCCEEEE
Confidence 3332 22334445534333443
No 225
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.45 E-value=0.00014 Score=66.51 Aligned_cols=103 Identities=16% Similarity=0.105 Sum_probs=66.1
Q ss_pred CCEEEEEcCChHHH-HHHHHhccC-CCEEE-EECCCCCCCC------CcccccCHHHhhc--CCCEEEEeccCChhhhhc
Q 043239 148 GKRVGIVGLGSIGS-EVAKRLVPF-GCSIA-YTSRKKKPGV------SYPFYANVSGLAA--DSDVLIVCCALTEETHHM 216 (286)
Q Consensus 148 g~~vgIiG~G~iG~-~~A~~l~~~-g~~V~-~~~r~~~~~~------~~~~~~~l~e~l~--~aDiV~~~lp~~~~t~~~ 216 (286)
..+|||||+|.||+ .+++.+... +++|+ +++++.++.. +...+.+++++++ +.|+|++|+|........
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 106 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHAEWI 106 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHHHHH
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHHHHH
Confidence 46899999999999 789988876 77875 7788765432 3444689999996 589999999854332211
Q ss_pred ccHHHHhcCCCC-cEEEEcC-CCcccCHHHHHHHHHhCCee
Q 043239 217 INKDVMTALGKE-GVIINVG-RGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 217 i~~~~l~~mk~g-~ilvn~s-rg~~vd~~al~~al~~~~i~ 255 (286)
... ++.| .+++.-- .-.+-+.++|.++.++.++.
T Consensus 107 --~~a---l~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~ 142 (350)
T 3rc1_A 107 --DRA---LRAGKHVLAEKPLTTDRPQAERLFAVARERGLL 142 (350)
T ss_dssp --HHH---HHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred --HHH---HHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence 222 2333 2444432 23445556666666554443
No 226
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.41 E-value=8.1e-05 Score=63.17 Aligned_cols=64 Identities=11% Similarity=0.140 Sum_probs=48.0
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------Ccc-------cccCHHHh-hcCCCEEEEeccCChh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------SYP-------FYANVSGL-AADSDVLIVCCALTEE 212 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~~~-------~~~~l~e~-l~~aDiV~~~lp~~~~ 212 (286)
++|.|+|+|.+|+.+|+.|...|++|++++++++... +.. ....+.++ +.++|+|++++|....
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~ 78 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEV 78 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHH
Confidence 4799999999999999999999999999998765321 111 11224443 6789999999886543
No 227
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.40 E-value=0.00056 Score=60.99 Aligned_cols=106 Identities=19% Similarity=0.244 Sum_probs=72.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHhccCCCEEE-EECCCC--CCCCCcccccCHHHhhc--CCCEEEEeccCChhhhhcccHHH
Q 043239 148 GKRVGIVGL-GSIGSEVAKRLVPFGCSIA-YTSRKK--KPGVSYPFYANVSGLAA--DSDVLIVCCALTEETHHMINKDV 221 (286)
Q Consensus 148 g~~vgIiG~-G~iG~~~A~~l~~~g~~V~-~~~r~~--~~~~~~~~~~~l~e~l~--~aDiV~~~lp~~~~t~~~i~~~~ 221 (286)
..+|+|+|+ |++|+.+++.++..|++++ ..++.. ....+...+.+++++.. ..|++++++|. +.+...+. +.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~-~~~~~~~~-ea 84 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVLGVPVYDTVKEAVAHHEVDASIIFVPA-PAAADAAL-EA 84 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHSCCSEEEECCCH-HHHHHHHH-HH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCceECCEEeeCCHHHHhhcCCCCEEEEecCH-HHHHHHHH-HH
Confidence 468999998 9999999999998899854 667654 22235556789999988 89999999983 33444443 22
Q ss_pred HhcCCCCcEEEEcCCC-cccCHHHHHHHHHhCCeeEE
Q 043239 222 MTALGKEGVIINVGRG-ALIDEKELVHFLVRGSLVEL 257 (286)
Q Consensus 222 l~~mk~g~ilvn~srg-~~vd~~al~~al~~~~i~ga 257 (286)
.+ ..-. .+|..+.| ..-+++.+.++.++..++-.
T Consensus 85 ~~-~Gi~-~vVi~t~G~~~~~~~~l~~~a~~~gi~vi 119 (288)
T 1oi7_A 85 AH-AGIP-LIVLITEGIPTLDMVRAVEEIKALGSRLI 119 (288)
T ss_dssp HH-TTCS-EEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HH-CCCC-EEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 22 1222 24555555 33456688888888776533
No 228
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.39 E-value=0.00058 Score=61.69 Aligned_cols=63 Identities=17% Similarity=0.296 Sum_probs=49.4
Q ss_pred CEEEEEcCChHHH-HHHHHhccCCCEE-EEECCCCCCCC-------CcccccCHHHhhc--CCCEEEEeccCCh
Q 043239 149 KRVGIVGLGSIGS-EVAKRLVPFGCSI-AYTSRKKKPGV-------SYPFYANVSGLAA--DSDVLIVCCALTE 211 (286)
Q Consensus 149 ~~vgIiG~G~iG~-~~A~~l~~~g~~V-~~~~r~~~~~~-------~~~~~~~l~e~l~--~aDiV~~~lp~~~ 211 (286)
.+|||||+|.+|. .+++.++..++++ .++|++.++.. +...+.+++++++ +.|+|++++|...
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 78 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCD 78 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGG
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhh
Confidence 5899999999996 6777776668886 57898877642 2345789999997 5899999998543
No 229
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.38 E-value=0.00022 Score=64.06 Aligned_cols=113 Identities=12% Similarity=0.117 Sum_probs=67.4
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCC-----------CcccccCHHHhhcCCCEEEEeccCCh---
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGV-----------SYPFYANVSGLAADSDVLIVCCALTE--- 211 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~-----------~~~~~~~l~e~l~~aDiV~~~lp~~~--- 211 (286)
.++|+|||.|.||..+|..+...|. +|..+|.+.+... ......++ +.+++||+|+++.....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~ 92 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQ 92 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----C
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCC
Confidence 3689999999999999999987787 8999998775211 11122466 67899999999863211
Q ss_pred -------hhhhcc---cHHHHhcCCCCcEEEEcCCCcccCHHHHHHH--HHhCCeeEE--Eeecc
Q 043239 212 -------ETHHMI---NKDVMTALGKEGVIINVGRGALIDEKELVHF--LVRGSLVEL--VLMCL 262 (286)
Q Consensus 212 -------~t~~~i---~~~~l~~mk~g~ilvn~srg~~vd~~al~~a--l~~~~i~ga--~lDv~ 262 (286)
.+..++ -++.-+. .|.+++++++...-+-...+.+. +...++.|. .||+.
T Consensus 93 tR~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~sNP~~~~t~~~~~~~~~p~~rviG~gt~Ld~~ 156 (303)
T 2i6t_A 93 SYLDVVQSNVDMFRALVPALGHY-SQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGIGCNLDSQ 156 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcCChHHHHHHHHHHhcCCCHHHeeCCCCCchHH
Confidence 111111 1222222 48899999877433333333332 223456555 34653
No 230
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.38 E-value=0.00018 Score=63.69 Aligned_cols=107 Identities=18% Similarity=0.142 Sum_probs=75.7
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCCC----------cccccCHHHhhcCCCEEEEeccCChhh
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGVS----------YPFYANVSGLAADSDVLIVCCALTEET 213 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~~----------~~~~~~l~e~l~~aDiV~~~lp~~~~t 213 (286)
++.++++.|+|.|-.+++++..|...|. +|++++|+.++... ........+.++++|+|+.+.|..-..
T Consensus 122 ~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm~~ 201 (269)
T 3tum_A 122 EPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGMGT 201 (269)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTCST
T ss_pred CcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCccccCC
Confidence 4678999999999999999999999997 79999998765321 111122223467899999999865322
Q ss_pred --hhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhC
Q 043239 214 --HHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRG 252 (286)
Q Consensus 214 --~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~ 252 (286)
..-+....++.++++.++.|+--.. ..+.=|..|-+.|
T Consensus 202 ~~~~p~~~~~~~~l~~~~~v~D~vY~P-~~T~ll~~A~~~G 241 (269)
T 3tum_A 202 RAELPLSAALLATLQPDTLVADVVTSP-EITPLLNRARQVG 241 (269)
T ss_dssp TCCCSSCHHHHHTCCTTSEEEECCCSS-SSCHHHHHHHHHT
T ss_pred CCCCCCChHHHhccCCCcEEEEEccCC-CCCHHHHHHHHCc
Confidence 1235667788899999999997554 3444444554444
No 231
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.37 E-value=0.00013 Score=62.86 Aligned_cols=90 Identities=17% Similarity=0.224 Sum_probs=59.0
Q ss_pred CCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------C-ccc-ccC-HHHhhcCCCEEEEeccCC
Q 043239 140 YPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------S-YPF-YAN-VSGLAADSDVLIVCCALT 210 (286)
Q Consensus 140 ~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~-~~~-~~~-l~e~l~~aDiV~~~lp~~ 210 (286)
++..-++.|++|.|||.|.+|...++.|...|.+|+++++...+.. + ... ..+ .++.+.++|+|+.+.. .
T Consensus 23 ~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~-d 101 (223)
T 3dfz_A 23 YTVMLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATN-D 101 (223)
T ss_dssp CEEEECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCC-C
T ss_pred cccEEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCC-C
Confidence 4566789999999999999999999999999999999988654210 1 110 011 1245678999887754 3
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcC
Q 043239 211 EETHHMINKDVMTALGKEGVIINVG 235 (286)
Q Consensus 211 ~~t~~~i~~~~l~~mk~g~ilvn~s 235 (286)
++.. .......+ -.++||+.
T Consensus 102 ~~~N----~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 102 QAVN----KFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp THHH----HHHHHHSC-TTCEEEC-
T ss_pred HHHH----HHHHHHHh-CCCEEEEe
Confidence 3332 23333334 34556654
No 232
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.37 E-value=0.00016 Score=64.81 Aligned_cols=90 Identities=12% Similarity=0.252 Sum_probs=59.2
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCC--------Cc------c-cc-cCHHHhhcCCCEEEEecc
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGV--------SY------P-FY-ANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~--------~~------~-~~-~~l~e~l~~aDiV~~~lp 208 (286)
..++|+|||.|.||..+|..|...|+ +|..++++.+... +. . .. .+ .+.+++||+|+++++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~aD~Vii~v~ 84 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD-PEICRDADMVVITAG 84 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC-GGGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCC-HHHhCCCCEEEECCC
Confidence 34799999999999999999998898 9999998753211 00 0 01 13 356789999999985
Q ss_pred CChhh---h--------hc---ccHHHHhcCCCCcEEEEcCCCc
Q 043239 209 LTEET---H--------HM---INKDVMTALGKEGVIINVGRGA 238 (286)
Q Consensus 209 ~~~~t---~--------~~---i~~~~l~~mk~g~ilvn~srg~ 238 (286)
..... + .+ +-+..-+ ..+++++++++.|-
T Consensus 85 ~~~~~g~~r~~~~~~n~~~~~~~~~~i~~-~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 85 PRQKPGQSRLELVGATVNILKAIMPNLVK-VAPNAIYMLITNPV 127 (319)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHH-HCTTSEEEECCSSH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCceEEEecCch
Confidence 32110 0 01 1122222 36788999987764
No 233
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.33 E-value=0.0003 Score=64.38 Aligned_cols=64 Identities=25% Similarity=0.379 Sum_probs=50.5
Q ss_pred CCEEEEEcCChHHHHHHHHhc-c-CCCEEE-EECCCCCCCC------C--cccccCHHHhhc--CCCEEEEeccCCh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLV-P-FGCSIA-YTSRKKKPGV------S--YPFYANVSGLAA--DSDVLIVCCALTE 211 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~-~-~g~~V~-~~~r~~~~~~------~--~~~~~~l~e~l~--~aDiV~~~lp~~~ 211 (286)
..+|||||+|.||+..++.+. . -+++++ ++|++.++.. + ...+.+++++++ +.|+|++|+|...
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 99 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEA 99 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHH
Confidence 468999999999999999988 4 367865 7898876532 3 345789999987 4899999998543
No 234
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.31 E-value=0.00037 Score=63.95 Aligned_cols=102 Identities=16% Similarity=0.248 Sum_probs=64.0
Q ss_pred CEEEEEcCChHHHH-HHHHhccC-CCEEE-EECCCCCCC----CCcccccCHHHhhc--CCCEEEEeccCChhhhhcccH
Q 043239 149 KRVGIVGLGSIGSE-VAKRLVPF-GCSIA-YTSRKKKPG----VSYPFYANVSGLAA--DSDVLIVCCALTEETHHMINK 219 (286)
Q Consensus 149 ~~vgIiG~G~iG~~-~A~~l~~~-g~~V~-~~~r~~~~~----~~~~~~~~l~e~l~--~aDiV~~~lp~~~~t~~~i~~ 219 (286)
.+|||||+|.||+. .++.++.. +++|+ +++++.++. .+...+.+++++++ +.|+|++|+|.......
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~---- 83 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPL---- 83 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHHH----
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHHH----
Confidence 58999999999997 77777765 67875 678876532 13445789999998 78999999985433221
Q ss_pred HHHhcCCCCc-EEEEcC-CCcccCHHHHHHHHHhCCee
Q 043239 220 DVMTALGKEG-VIINVG-RGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 220 ~~l~~mk~g~-ilvn~s-rg~~vd~~al~~al~~~~i~ 255 (286)
....++.|. +++.-- .-.+-+.+.|.++.++.++.
T Consensus 84 -~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~ 120 (364)
T 3e82_A 84 -ARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRL 120 (364)
T ss_dssp -HHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCe
Confidence 122233343 333221 22334455566666555443
No 235
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.30 E-value=0.00014 Score=68.89 Aligned_cols=109 Identities=13% Similarity=0.151 Sum_probs=72.7
Q ss_pred CCCEEEEEcCChH--HHHHHHHhcc----CCCEEEEECCCCCCCC--------------CcccccCHHHhhcCCCEEEEe
Q 043239 147 GGKRVGIVGLGSI--GSEVAKRLVP----FGCSIAYTSRKKKPGV--------------SYPFYANVSGLAADSDVLIVC 206 (286)
Q Consensus 147 ~g~~vgIiG~G~i--G~~~A~~l~~----~g~~V~~~~r~~~~~~--------------~~~~~~~l~e~l~~aDiV~~~ 206 (286)
++++|+|||.|.+ |..++..+.. .| +|..||+..+... ......++++++++||+|+++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 4579999999997 5788877653 46 9999998764311 122346899999999999999
Q ss_pred ccCC-----------hhhhhcccH------------------------HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 043239 207 CALT-----------EETHHMINK------------------------DVMTALGKEGVIINVGRGALIDEKELVHFLVR 251 (286)
Q Consensus 207 lp~~-----------~~t~~~i~~------------------------~~l~~mk~g~ilvn~srg~~vd~~al~~al~~ 251 (286)
++.. +...++... +.+....|.+++||++..--+-+.++.+.+..
T Consensus 83 irvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k~~p~ 162 (450)
T 3fef_A 83 ILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKVFPG 162 (450)
T ss_dssp CCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHCTT
T ss_pred cccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHHCCC
Confidence 9643 222333111 12223368999999988876666666665444
Q ss_pred CCeeE
Q 043239 252 GSLVE 256 (286)
Q Consensus 252 ~~i~g 256 (286)
.++.|
T Consensus 163 ~rviG 167 (450)
T 3fef_A 163 IKAIG 167 (450)
T ss_dssp CEEEE
T ss_pred CCEEE
Confidence 44444
No 236
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.29 E-value=0.00021 Score=64.52 Aligned_cols=63 Identities=19% Similarity=0.400 Sum_probs=46.3
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCCC---------------cccccCHHHhhcCCCEEEEeccCC
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGVS---------------YPFYANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~~---------------~~~~~~l~e~l~~aDiV~~~lp~~ 210 (286)
.++|+|||.|.||.++|..++..|. +|..+|++.+...+ .....+..+.+++||+|+++.|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 4699999999999999999987664 89999987642210 000123456789999999997643
No 237
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.26 E-value=0.00049 Score=62.54 Aligned_cols=63 Identities=17% Similarity=0.287 Sum_probs=46.5
Q ss_pred CEEEEEcCChHHHH-HHH-Hhcc-CCCEEE-EECCCCCCCC------CcccccCHHHhhcC--CCEEEEeccCCh
Q 043239 149 KRVGIVGLGSIGSE-VAK-RLVP-FGCSIA-YTSRKKKPGV------SYPFYANVSGLAAD--SDVLIVCCALTE 211 (286)
Q Consensus 149 ~~vgIiG~G~iG~~-~A~-~l~~-~g~~V~-~~~r~~~~~~------~~~~~~~l~e~l~~--aDiV~~~lp~~~ 211 (286)
.+|||||+|.||+. .+. .+.. -+++++ +++++.++.. +...+.++++++++ .|+|++|+|...
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 77 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADS 77 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGG
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHH
Confidence 48999999999996 555 3343 367876 7888765432 23356899999976 899999998543
No 238
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.26 E-value=0.00041 Score=63.53 Aligned_cols=101 Identities=17% Similarity=0.231 Sum_probs=63.8
Q ss_pred CCEEEEEcCChHHHH-HHHHhccC-CCEEE-EECCCCCCCC-------CcccccCHHHhhcCC--CEEEEeccCChhhhh
Q 043239 148 GKRVGIVGLGSIGSE-VAKRLVPF-GCSIA-YTSRKKKPGV-------SYPFYANVSGLAADS--DVLIVCCALTEETHH 215 (286)
Q Consensus 148 g~~vgIiG~G~iG~~-~A~~l~~~-g~~V~-~~~r~~~~~~-------~~~~~~~l~e~l~~a--DiV~~~lp~~~~t~~ 215 (286)
..+|||||+|.||+. +++.+... +++++ ++|++.++.. ....+.++++++++. |+|++|+|......
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~- 83 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHFE- 83 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHHH-
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHHH-
Confidence 358999999999995 88888776 67875 7888765421 234568999999754 99999998432221
Q ss_pred cccHHHHhcCCCC-cEEEEcC-CCcccCHHHHHHHHHhCC
Q 043239 216 MINKDVMTALGKE-GVIINVG-RGALIDEKELVHFLVRGS 253 (286)
Q Consensus 216 ~i~~~~l~~mk~g-~ilvn~s-rg~~vd~~al~~al~~~~ 253 (286)
+-... ++.| .+|+.-- .-++-+.++|.++.++.+
T Consensus 84 -~~~~a---l~aGkhVl~EKPla~~~~e~~~l~~~a~~~g 119 (359)
T 3m2t_A 84 -MGLLA---MSKGVNVFVEKPPCATLEELETLIDAARRSD 119 (359)
T ss_dssp -HHHHH---HHTTCEEEECSCSCSSHHHHHHHHHHHHHHT
T ss_pred -HHHHH---HHCCCeEEEECCCcCCHHHHHHHHHHHHHcC
Confidence 11222 3344 3454421 223345556666555533
No 239
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.24 E-value=0.00021 Score=68.04 Aligned_cols=105 Identities=18% Similarity=0.177 Sum_probs=65.0
Q ss_pred cccCCCCEEEEEcCChHHHHHHHHhccC-CCEEEEECCCCCCCC------Ccc-------cccCHHHhhcCCCEEEEecc
Q 043239 143 GSTLGGKRVGIVGLGSIGSEVAKRLVPF-GCSIAYTSRKKKPGV------SYP-------FYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~A~~l~~~-g~~V~~~~r~~~~~~------~~~-------~~~~l~e~l~~aDiV~~~lp 208 (286)
+..+.+++|+|+|.|.+|+.+++.|... |++|.+++|+.++.. +.. ...++.++++++|+|++++|
T Consensus 18 ~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp 97 (467)
T 2axq_A 18 EGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIP 97 (467)
T ss_dssp -----CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSC
T ss_pred ccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCc
Confidence 4567899999999999999999999987 789999999764321 111 11245677889999999998
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCC
Q 043239 209 LTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGS 253 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~ 253 (286)
..... . +.. ..+++|..+++++--.. +...|.++.++.+
T Consensus 98 ~~~~~-~-v~~---a~l~~g~~vvd~~~~~p-~~~~Ll~~Ak~aG 136 (467)
T 2axq_A 98 YTFHP-N-VVK---SAIRTKTDVVTSSYISP-ALRELEPEIVKAG 136 (467)
T ss_dssp GGGHH-H-HHH---HHHHHTCEEEECSCCCH-HHHHHHHHHHHHT
T ss_pred hhhhH-H-HHH---HHHhcCCEEEEeecCCH-HHHHHHHHHHHcC
Confidence 54221 1 112 22345667777653111 2345555544433
No 240
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.23 E-value=0.00059 Score=61.67 Aligned_cols=114 Identities=21% Similarity=0.255 Sum_probs=67.7
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCCC-------c-------ccccCHHHhhcCCCEEEEeccCCh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGVS-------Y-------PFYANVSGLAADSDVLIVCCALTE 211 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~~-------~-------~~~~~l~e~l~~aDiV~~~lp~~~ 211 (286)
.++|+|||.|.+|.+++..|...|. +|..+|...++..+ . ....+-.+.+++||+|+++.+...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 3689999999999999999998887 89999987654331 0 011123567899999999987432
Q ss_pred hhhhc-------cc----HH---HHhcCCCCcEEEEcCCCcccCHHHHHHH--HHhCCeeEE--Eeecc
Q 043239 212 ETHHM-------IN----KD---VMTALGKEGVIINVGRGALIDEKELVHF--LVRGSLVEL--VLMCL 262 (286)
Q Consensus 212 ~t~~~-------i~----~~---~l~~mk~g~ilvn~srg~~vd~~al~~a--l~~~~i~ga--~lDv~ 262 (286)
..+. .+ ++ .+....|++++++++..-=+....+.+. +...++-|. .||+.
T Consensus 87 -k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~k~s~~p~~rviG~gt~Ld~~ 154 (318)
T 1y6j_A 87 -KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGSGTVLDSI 154 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHHHHHHHTCCTTTEEECTTHHHHH
T ss_pred -CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHcCCCHHHEeccCCchHHH
Confidence 1111 00 11 1222268999999754333333344333 344466665 36744
No 241
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=97.22 E-value=0.01 Score=53.19 Aligned_cols=146 Identities=19% Similarity=0.184 Sum_probs=95.9
Q ss_pred cEEEEcCCCCCcCChhH-HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCE
Q 043239 72 EIVVGSTAGIDHVDLQE-CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKR 150 (286)
Q Consensus 72 k~i~~~~~G~d~id~~~-~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~ 150 (286)
-.|..+... +=.+.. ++-.+|+|.|..+...-++ .+|+=++.+.++. | .+.|.+
T Consensus 96 D~iviR~~~--~~~~~~lA~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~---------g------------~l~gl~ 150 (307)
T 2i6u_A 96 DAIVWRTFG--QERLDAMASVATVPVINALSDEFHPC--QVLADLQTIAERK---------G------------ALRGLR 150 (307)
T ss_dssp EEEEEECSS--HHHHHHHHHHCSSCEEESCCSSCCHH--HHHHHHHHHHHHH---------S------------CCTTCE
T ss_pred CEEEEecCC--hhHHHHHHhhCCCCEEcCCCCCcCcc--HHHHHHHHHHHHh---------C------------CcCCeE
Confidence 455555432 222333 3445799999766433333 3444444433321 1 378999
Q ss_pred EEEEcCC--hHHHHHHHHhccCCCEEEEECCCCCCCC--------------C--cccccCHHHhhcCCCEEEEecc-C--
Q 043239 151 VGIVGLG--SIGSEVAKRLVPFGCSIAYTSRKKKPGV--------------S--YPFYANVSGLAADSDVLIVCCA-L-- 209 (286)
Q Consensus 151 vgIiG~G--~iG~~~A~~l~~~g~~V~~~~r~~~~~~--------------~--~~~~~~l~e~l~~aDiV~~~lp-~-- 209 (286)
|+++|=| ++..+++..+..+|++|.+..+..-... + +....+++|+++++|+|.+-.= .
T Consensus 151 va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~~w~smg 230 (307)
T 2i6u_A 151 LSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMG 230 (307)
T ss_dssp EEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTT
T ss_pred EEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEecceecCC
Confidence 9999985 9999999999999999998887553322 1 2236789999999999988321 0
Q ss_pred ----Ch-----hhhhcccHHHHhcCCCCcEEEEcC---CCcccCH
Q 043239 210 ----TE-----ETHHMINKDVMTALGKEGVIINVG---RGALIDE 242 (286)
Q Consensus 210 ----~~-----~t~~~i~~~~l~~mk~g~ilvn~s---rg~~vd~ 242 (286)
.+ -....++++.++.+|++++|.-+. ||.=|+.
T Consensus 231 ~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lP~~Rg~EI~~ 275 (307)
T 2i6u_A 231 QENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCLPAHRGDEITD 275 (307)
T ss_dssp CTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCH
T ss_pred cccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCCCCCCCcccCH
Confidence 00 023557889999999999999996 4544443
No 242
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.22 E-value=0.00034 Score=70.16 Aligned_cols=113 Identities=11% Similarity=0.151 Sum_probs=82.6
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC--------------------C-------cccccCHHHhhcCCC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV--------------------S-------YPFYANVSGLAADSD 201 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~--------------------~-------~~~~~~l~e~l~~aD 201 (286)
++|||||.|.||..+|..+...|++|+.+|++++... . .....+. +.+++||
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~aD 395 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTVD 395 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCG-GGGGSCS
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcH-HHHhhCC
Confidence 6899999999999999999999999999998764211 0 0112333 4578999
Q ss_pred EEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEEeeccCCC
Q 043239 202 VLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELVLMCLRTS 265 (286)
Q Consensus 202 iV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~lDv~~~e 265 (286)
+|+=++|..-+.+.-+-++.-+.++++++|-.-. +-+.-..|.+.++ +.=+.+++=.|.+.
T Consensus 396 lVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNT--Ssl~i~~ia~~~~-~p~r~ig~HFfnP~ 456 (742)
T 3zwc_A 396 LVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNT--SALNVDDIASSTD-RPQLVIGTHFFSPA 456 (742)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECC--SSSCHHHHHTTSS-CGGGEEEEECCSST
T ss_pred EEEEeccccHHHHHHHHHHHhhcCCCCceEEecC--CcCChHHHHhhcC-CccccccccccCCC
Confidence 9999999888877777677777789999876443 3355666766653 34456677777554
No 243
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.22 E-value=0.00034 Score=62.94 Aligned_cols=59 Identities=25% Similarity=0.277 Sum_probs=46.3
Q ss_pred CEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC---------------C--cccccCHHHhhcCCCEEEEecc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV---------------S--YPFYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~---------------~--~~~~~~l~e~l~~aDiV~~~lp 208 (286)
++|+|||.|.||..++..+...|+ +|..+|++.++.. . .....+. +.+++||+|+++.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g 79 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSG 79 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCC
Confidence 589999999999999999998886 8999998764321 0 1112466 67899999999975
No 244
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.20 E-value=0.0011 Score=59.66 Aligned_cols=107 Identities=16% Similarity=0.240 Sum_probs=74.6
Q ss_pred cCCCCEEEEE-cC-ChHHHHHHHHhccCCCEEE-EECCCCC--CCCCcccccCHHHhhc--CCCEEEEeccCChhhhhcc
Q 043239 145 TLGGKRVGIV-GL-GSIGSEVAKRLVPFGCSIA-YTSRKKK--PGVSYPFYANVSGLAA--DSDVLIVCCALTEETHHMI 217 (286)
Q Consensus 145 ~l~g~~vgIi-G~-G~iG~~~A~~l~~~g~~V~-~~~r~~~--~~~~~~~~~~l~e~l~--~aDiV~~~lp~~~~t~~~i 217 (286)
-+..++++|| |+ |++|+.+++.++..|++++ ..++... ...+...+.+++|+.+ ..|++++++|. +....++
T Consensus 10 l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~vD~avI~vP~-~~~~~~~ 88 (305)
T 2fp4_A 10 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVIYVPP-PFAAAAI 88 (305)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCH-HHHHHHH
T ss_pred HhCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcceECCeeeechHHHhhhcCCCCEEEEecCH-HHHHHHH
Confidence 3566788999 99 9999999999999999854 5666542 2335556789999988 89999999994 3334444
Q ss_pred cHHHHhcCCCC-cEEEEcCCCcc-cCHHHHHHHHHhC-CeeE
Q 043239 218 NKDVMTALGKE-GVIINVGRGAL-IDEKELVHFLVRG-SLVE 256 (286)
Q Consensus 218 ~~~~l~~mk~g-~ilvn~srg~~-vd~~al~~al~~~-~i~g 256 (286)
.+ ..+ .| ..+|+.+.|-. -++..+.+.+++. .++-
T Consensus 89 ~e-~i~---~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~l 126 (305)
T 2fp4_A 89 NE-AID---AEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRL 126 (305)
T ss_dssp HH-HHH---TTCSEEEECCCCCCHHHHHHHHHHHTTCSSCEE
T ss_pred HH-HHH---CCCCEEEEECCCCChHHHHHHHHHHHhcCCcEE
Confidence 32 322 22 24566777642 3455888888887 6653
No 245
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.20 E-value=0.00039 Score=63.12 Aligned_cols=110 Identities=15% Similarity=0.164 Sum_probs=68.3
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC---------------Ccc--cccCHHHhhcCCCEEEEecc
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV---------------SYP--FYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~---------------~~~--~~~~l~e~l~~aDiV~~~lp 208 (286)
..++|+|||.|.||..+|..|...|+ +|..+|+..++.. ... ...+. +.+++||+|+++.+
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaag 84 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTAG 84 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECCS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEccC
Confidence 46799999999999999999988888 9999999876421 111 12344 78999999999864
Q ss_pred CChhhhhc-----c--c----HH---HHhcCCCCcEEEEcCCCcccCHHHHHHH--HHhCCeeEEE
Q 043239 209 LTEETHHM-----I--N----KD---VMTALGKEGVIINVGRGALIDEKELVHF--LVRGSLVELV 258 (286)
Q Consensus 209 ~~~~t~~~-----i--~----~~---~l~~mk~g~ilvn~srg~~vd~~al~~a--l~~~~i~ga~ 258 (286)
.. ...++ + | ++ .+....|++++++++..-=+....+.+. +...++.|.+
T Consensus 85 ~p-~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPvd~~t~~~~k~sg~p~~rviG~~ 149 (324)
T 3gvi_A 85 VP-RKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMVWALQKFSGLPAHKVVGMA 149 (324)
T ss_dssp CC-CC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECC
T ss_pred cC-CCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCcHHHHHHHHHhcCCCHHHEEeec
Confidence 22 11111 1 1 11 1222358899999975433333333332 1223455554
No 246
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.19 E-value=0.00041 Score=62.69 Aligned_cols=110 Identities=16% Similarity=0.210 Sum_probs=67.4
Q ss_pred CEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCC---------------Ccccc-cCHHHhhcCCCEEEEeccCC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGV---------------SYPFY-ANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~---------------~~~~~-~~l~e~l~~aDiV~~~lp~~ 210 (286)
++|+|+|.|.||.++|..+...|. +|..+|++.++.. ..... .+..+.+++||+|+++.+..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 589999999999999999987776 8999999875422 01111 24567899999999987543
Q ss_pred hh-----------hhhcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHH--HHhCCeeEEE
Q 043239 211 EE-----------THHMINK--DVMTALGKEGVIINVGRGALIDEKELVHF--LVRGSLVELV 258 (286)
Q Consensus 211 ~~-----------t~~~i~~--~~l~~mk~g~ilvn~srg~~vd~~al~~a--l~~~~i~ga~ 258 (286)
.. +..++.. +.+....|.+++++++..-=+....+.+. +...++.|.+
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~~k~~g~p~~rviG~~ 143 (314)
T 3nep_X 81 RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPLDVMTYVAYEASGFPTNRVMGMA 143 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSHHHHHHHHHHHHTCCGGGEEECC
T ss_pred CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCchhHHHHHHHHhcCCChHHEEeec
Confidence 21 1111110 12333468899999975432333333332 1134555554
No 247
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.18 E-value=0.00014 Score=68.20 Aligned_cols=84 Identities=19% Similarity=0.203 Sum_probs=58.5
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Ccc-------cccCHHHh-hcCCCEEEEeccCChhhh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYP-------FYANVSGL-AADSDVLIVCCALTEETH 214 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~-------~~~~l~e~-l~~aDiV~~~lp~~~~t~ 214 (286)
+.+|.|+|+|.+|+.+++.|...|++|++.+++++... +.. ....|.++ +.++|+|+++++....+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 45799999999999999999999999999998765421 211 11224444 688999999998654443
Q ss_pred hcccHHHHhcCCCCcEEEE
Q 043239 215 HMINKDVMTALGKEGVIIN 233 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~ilvn 233 (286)
.+ ......+.+...+|-
T Consensus 84 ~i--~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 84 QL--TEMVKEHFPHLQIIA 100 (413)
T ss_dssp HH--HHHHHHHCTTCEEEE
T ss_pred HH--HHHHHHhCCCCeEEE
Confidence 33 345555667655543
No 248
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.16 E-value=0.0068 Score=54.43 Aligned_cols=131 Identities=11% Similarity=0.140 Sum_probs=87.7
Q ss_pred HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEc-CChHHHHHHHHh
Q 043239 89 CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVG-LGSIGSEVAKRL 167 (286)
Q Consensus 89 ~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG-~G~iG~~~A~~l 167 (286)
++..+|+|.|..+...-++ .+|+=++.+.++. | .+.|.+|+++| .+++..+++..+
T Consensus 118 A~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~---------g------------~l~glkva~vGD~~~va~Sl~~~~ 174 (309)
T 4f2g_A 118 AENSRVPVINGLTNEYHPC--QVLADIFTYYEHR---------G------------PIRGKTVAWVGDANNMLYTWIQAA 174 (309)
T ss_dssp HHTCSSCEEEEECSSCCHH--HHHHHHHHHHHHH---------S------------CCTTCEEEEESCCCHHHHHHHHHH
T ss_pred HHhCCCCEEECCCCccCcH--HHHHHHHHHHHHh---------C------------CCCCCEEEEECCCcchHHHHHHHH
Confidence 3455799999876443333 3333333333221 1 37899999999 578899999999
Q ss_pred ccCCCEEEEECCCCCCCC----------CcccccCHHHhhcCCCEEEEec----cCCh--------hhhhcccHHHHhcC
Q 043239 168 VPFGCSIAYTSRKKKPGV----------SYPFYANVSGLAADSDVLIVCC----ALTE--------ETHHMINKDVMTAL 225 (286)
Q Consensus 168 ~~~g~~V~~~~r~~~~~~----------~~~~~~~l~e~l~~aDiV~~~l----p~~~--------~t~~~i~~~~l~~m 225 (286)
..+|++|.+..+..-... .+....+++|+++++|+|.+-. .... -....++.+.++.+
T Consensus 175 ~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a 254 (309)
T 4f2g_A 175 RILDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEEMMSHA 254 (309)
T ss_dssp HHHTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC------------CCSGGGGCBCHHHHTTS
T ss_pred HHcCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHHHHHhc
Confidence 999999998876432211 1223579999999999998743 1100 02355789999999
Q ss_pred CCCcEEEEcC---CCcccCH
Q 043239 226 GKEGVIINVG---RGALIDE 242 (286)
Q Consensus 226 k~g~ilvn~s---rg~~vd~ 242 (286)
|++++|.-+. ||.=|+.
T Consensus 255 ~~~ai~mH~lP~~Rg~EI~~ 274 (309)
T 4f2g_A 255 NSDALFMHCLPAHRGEEVTA 274 (309)
T ss_dssp CTTCEEEECSSCCBTTTBCH
T ss_pred CCCeEEECCCCCCCCceecH
Confidence 9999999986 5644443
No 249
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.15 E-value=0.00071 Score=57.73 Aligned_cols=92 Identities=16% Similarity=0.066 Sum_probs=62.1
Q ss_pred CCCCEEEEEc-CChHHHHHHHHhccCC-CEEEEECCCCCCCCC-----c-------ccccCHHHhhcCCCEEEEeccCCh
Q 043239 146 LGGKRVGIVG-LGSIGSEVAKRLVPFG-CSIAYTSRKKKPGVS-----Y-------PFYANVSGLAADSDVLIVCCALTE 211 (286)
Q Consensus 146 l~g~~vgIiG-~G~iG~~~A~~l~~~g-~~V~~~~r~~~~~~~-----~-------~~~~~l~e~l~~aDiV~~~lp~~~ 211 (286)
...++|.|.| .|.||+.+++.|...| ++|.+.+|+.++... . ....+++++++.+|+|+.+.....
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~ 100 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED 100 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence 3457899999 7999999999999999 899999987654321 1 112356678899999998876432
Q ss_pred hhhhcccHHHHhcCCC-C-cEEEEcCCCcc
Q 043239 212 ETHHMINKDVMTALGK-E-GVIINVGRGAL 239 (286)
Q Consensus 212 ~t~~~i~~~~l~~mk~-g-~ilvn~srg~~ 239 (286)
.. ...+..++.|+. + ..||++|....
T Consensus 101 ~~--~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 101 LD--IQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp HH--HHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred hh--HHHHHHHHHHHHcCCCEEEEEeccee
Confidence 21 112344555532 2 46888876443
No 250
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.14 E-value=7.6e-05 Score=65.16 Aligned_cols=79 Identities=22% Similarity=0.349 Sum_probs=56.3
Q ss_pred ccCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCC-------------------CCC-----------Ccc--c-
Q 043239 144 STLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKK-------------------PGV-----------SYP--F- 189 (286)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~-------------------~~~-----------~~~--~- 189 (286)
..|.+++|.|+|+|.+|..+|+.|...|. ++.++|+..- +.. ... .
T Consensus 27 ~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 27 EALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 106 (249)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 35889999999999999999999999998 8999998751 100 000 0
Q ss_pred ---c--cCHHHhhcCCCEEEEeccCChhhhhcccHHHHh
Q 043239 190 ---Y--ANVSGLAADSDVLIVCCALTEETHHMINKDVMT 223 (286)
Q Consensus 190 ---~--~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~ 223 (286)
. .+++++++++|+|+.+++ +.+++..+++....
T Consensus 107 ~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~ 144 (249)
T 1jw9_B 107 NALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFA 144 (249)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHH
T ss_pred eccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHH
Confidence 1 134567788899888875 56677666655443
No 251
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.13 E-value=0.0012 Score=55.58 Aligned_cols=86 Identities=16% Similarity=0.212 Sum_probs=59.3
Q ss_pred CEEEEEc-CChHHHHHHHHhc-cCCCEEEEECCCCC-CCC-------Cc-------ccccCHHHhhcCCCEEEEeccCCh
Q 043239 149 KRVGIVG-LGSIGSEVAKRLV-PFGCSIAYTSRKKK-PGV-------SY-------PFYANVSGLAADSDVLIVCCALTE 211 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~-~~g~~V~~~~r~~~-~~~-------~~-------~~~~~l~e~l~~aDiV~~~lp~~~ 211 (286)
++|.|.| .|.||+.+++.|. ..|++|.+.+|+.+ ... .. ....+++++++.+|+|+.+....
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~- 84 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES- 84 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC-
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC-
Confidence 5699999 6999999999999 89999999998765 321 11 11245667889999999887643
Q ss_pred hhhhcccHHHHhcCCC-C-cEEEEcCCCc
Q 043239 212 ETHHMINKDVMTALGK-E-GVIINVGRGA 238 (286)
Q Consensus 212 ~t~~~i~~~~l~~mk~-g-~ilvn~srg~ 238 (286)
... .+..++.|+. + ..||++|...
T Consensus 85 n~~---~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 85 GSD---MASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp HHH---HHHHHHHHHHTTCCEEEEEEETT
T ss_pred Chh---HHHHHHHHHhcCCCeEEEEeece
Confidence 111 3445555532 2 3677776443
No 252
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=97.13 E-value=0.0026 Score=56.98 Aligned_cols=154 Identities=17% Similarity=0.138 Sum_probs=100.1
Q ss_pred HHhccCCCccEEEEcCCCCCcCChhH-HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCC
Q 043239 63 DTLSLLPALEIVVGSTAGIDHVDLQE-CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYP 141 (286)
Q Consensus 63 ~~l~~~~~Lk~i~~~~~G~d~id~~~-~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~ 141 (286)
.+++++. -.|..+... +=.+.. ++-.+|+|.|..+...-++ .+|+=++.+.++. |
T Consensus 95 rvls~~~--D~iviR~~~--~~~~~~la~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~---------g--------- 150 (301)
T 2ef0_A 95 KNLERFV--EGIAARVFR--HETVEALARHAKVPVVNALSDRAHPL--QALADLLTLKEVF---------G--------- 150 (301)
T ss_dssp HHHTTTC--SEEEEECSS--HHHHHHHHHHCSSCEEEEECSSCCHH--HHHHHHHHHHHHH---------S---------
T ss_pred HHHHHhC--CEEEEecCC--hHHHHHHHHHCCCCEEeCCCCccCch--HHHHHHHHHHHHh---------C---------
Confidence 4444443 445544332 222333 3445799999765433333 3444444433321 1
Q ss_pred CcccCCCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCCC-------cccccCHHHhhcCCCEEEEecc----C
Q 043239 142 LGSTLGGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGVS-------YPFYANVSGLAADSDVLIVCCA----L 209 (286)
Q Consensus 142 ~~~~l~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~-------~~~~~~l~e~l~~aDiV~~~lp----~ 209 (286)
.+.|.+|+++|= +++..+++..+..+|++|.+..+..-.... +....+++|+++++|+|.+-.= .
T Consensus 151 ---~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~ 227 (301)
T 2ef0_A 151 ---GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQ 227 (301)
T ss_dssp ---CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC----
T ss_pred ---CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCc
Confidence 378999999996 899999999999999999988875543321 3346799999999999987321 0
Q ss_pred ----Ch--h--hhhcccHHHHhcCCCCcEEEEcC---CCcccCHH
Q 043239 210 ----TE--E--THHMINKDVMTALGKEGVIINVG---RGALIDEK 243 (286)
Q Consensus 210 ----~~--~--t~~~i~~~~l~~mk~g~ilvn~s---rg~~vd~~ 243 (286)
.. . ....++++.++.+|++++|.-+. ||.=|+.+
T Consensus 228 ~~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~~e 272 (301)
T 2ef0_A 228 EAEREKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETTEE 272 (301)
T ss_dssp ----CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCHH
T ss_pred ccchhHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccCHH
Confidence 00 0 23557899999999999999997 56545544
No 253
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.13 E-value=0.00086 Score=61.07 Aligned_cols=101 Identities=18% Similarity=0.208 Sum_probs=64.0
Q ss_pred CEEEEEcCChHHHH-HHHHhccC-CCEEE-EECCCCCCC----CCcccccCHHHhhcC--CCEEEEeccCChhhhhcccH
Q 043239 149 KRVGIVGLGSIGSE-VAKRLVPF-GCSIA-YTSRKKKPG----VSYPFYANVSGLAAD--SDVLIVCCALTEETHHMINK 219 (286)
Q Consensus 149 ~~vgIiG~G~iG~~-~A~~l~~~-g~~V~-~~~r~~~~~----~~~~~~~~l~e~l~~--aDiV~~~lp~~~~t~~~i~~ 219 (286)
.+|||||+|.||+. .++.+... +++|. +++++.++. .+...+.++++++++ .|+|++|+|........
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~--- 84 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLA--- 84 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEECSCTTTHHHHH---
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHH---
Confidence 58999999999997 78877765 67865 678776432 134457899999976 89999999865432221
Q ss_pred HHHhcCCCCc-EEEEcC-CCcccCHHHHHHHHHhCCe
Q 043239 220 DVMTALGKEG-VIINVG-RGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 220 ~~l~~mk~g~-ilvn~s-rg~~vd~~al~~al~~~~i 254 (286)
...++.|. +++.-- .-.+-+.+.|.++.++.++
T Consensus 85 --~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~ 119 (352)
T 3kux_A 85 --QSALAAGKHVVVDKPFTVTLSQANALKEHADDAGL 119 (352)
T ss_dssp --HHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTC
T ss_pred --HHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCC
Confidence 12233332 444322 2233445555555555444
No 254
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.13 E-value=0.00022 Score=64.73 Aligned_cols=101 Identities=21% Similarity=0.267 Sum_probs=64.6
Q ss_pred CEEEEEcCChHHHHHHHHhc-c-CCCEEE-EECCCCCCCC------C--cccccCHHHhhcC--CCEEEEeccCChhhhh
Q 043239 149 KRVGIVGLGSIGSEVAKRLV-P-FGCSIA-YTSRKKKPGV------S--YPFYANVSGLAAD--SDVLIVCCALTEETHH 215 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~-~-~g~~V~-~~~r~~~~~~------~--~~~~~~l~e~l~~--aDiV~~~lp~~~~t~~ 215 (286)
.+|||||+|.||+..++.+. . -+++++ +++++.+... + ...+.++++++++ .|+|++|+|.......
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 82 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHESS 82 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhHHHH
Confidence 48999999999999999998 5 467765 6888765421 3 3457899999976 8999999985433221
Q ss_pred cccHHHHhcCCCCc-EEEEcC-CCcccCHHHHHHHHHhCCe
Q 043239 216 MINKDVMTALGKEG-VIINVG-RGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 216 ~i~~~~l~~mk~g~-ilvn~s-rg~~vd~~al~~al~~~~i 254 (286)
. .. .++.|. +++.-- .-.+-+.+.|.++.++.+.
T Consensus 83 ~--~~---al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~ 118 (344)
T 3mz0_A 83 V--LK---AIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGK 118 (344)
T ss_dssp H--HH---HHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSS
T ss_pred H--HH---HHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCC
Confidence 1 12 233342 444322 2234455556665555443
No 255
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=97.11 E-value=0.00062 Score=64.93 Aligned_cols=110 Identities=15% Similarity=0.203 Sum_probs=72.5
Q ss_pred CCEEEEEcCChH--HHHHHHHhcc---C-CCEEEEECCCCCCCC-----------------CcccccCHHHhhcCCCEEE
Q 043239 148 GKRVGIVGLGSI--GSEVAKRLVP---F-GCSIAYTSRKKKPGV-----------------SYPFYANVSGLAADSDVLI 204 (286)
Q Consensus 148 g~~vgIiG~G~i--G~~~A~~l~~---~-g~~V~~~~r~~~~~~-----------------~~~~~~~l~e~l~~aDiV~ 204 (286)
.++|+|||.|.| |.++|..|.. + |.+|..||++.+... ......++++.+++||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 468999999997 4655666642 3 789999999775311 1122357888999999999
Q ss_pred EeccCCh-----------hhhhccc-------------------------HH---HHhcCCCCcEEEEcCCCcccCHHHH
Q 043239 205 VCCALTE-----------ETHHMIN-------------------------KD---VMTALGKEGVIINVGRGALIDEKEL 245 (286)
Q Consensus 205 ~~lp~~~-----------~t~~~i~-------------------------~~---~l~~mk~g~ilvn~srg~~vd~~al 245 (286)
+++|... .-.+++. .+ .+....|+++++|++..--+-+.++
T Consensus 83 iaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~~~ 162 (480)
T 1obb_A 83 NTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLV 162 (480)
T ss_dssp ECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH
T ss_pred ECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 9997411 0001100 11 2333468999999988876666777
Q ss_pred HHHHHhCCeeEEE
Q 043239 246 VHFLVRGSLVELV 258 (286)
Q Consensus 246 ~~al~~~~i~ga~ 258 (286)
.+ +...++-|.+
T Consensus 163 ~k-~p~~rviG~c 174 (480)
T 1obb_A 163 TR-TVPIKAVGFC 174 (480)
T ss_dssp HH-HSCSEEEEEC
T ss_pred HH-CCCCcEEecC
Confidence 65 6666776664
No 256
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.10 E-value=0.0011 Score=59.97 Aligned_cols=101 Identities=20% Similarity=0.174 Sum_probs=64.8
Q ss_pred CEEEEEcCChHHHHHHHHhccCC---CEE-EEECCCCCCCC------Cc-ccccCHHHhhc--CCCEEEEeccCChhhhh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFG---CSI-AYTSRKKKPGV------SY-PFYANVSGLAA--DSDVLIVCCALTEETHH 215 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g---~~V-~~~~r~~~~~~------~~-~~~~~l~e~l~--~aDiV~~~lp~~~~t~~ 215 (286)
.++||||+|.||+..++.++..+ +++ .+++++.++.. +. ..+.+++++++ +.|+|++++|......
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~- 81 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKA- 81 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGHHH-
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHH-
Confidence 48999999999999999998654 455 46788765432 22 35789999997 5999999998543322
Q ss_pred cccHHHHhcCCCC-cEEEEc-CCCcccCHHHHHHHHHhCCe
Q 043239 216 MINKDVMTALGKE-GVIINV-GRGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 216 ~i~~~~l~~mk~g-~ilvn~-srg~~vd~~al~~al~~~~i 254 (286)
+.... ++.| .+++.- -.-++-+.+.|.++.++.++
T Consensus 82 -~~~~a---l~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~ 118 (334)
T 3ohs_X 82 -AVMLC---LAAGKAVLCEKPMGVNAAEVREMVTEARSRGL 118 (334)
T ss_dssp -HHHHH---HHTTCEEEEESSSSSSHHHHHHHHHHHHHTTC
T ss_pred -HHHHH---HhcCCEEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 11222 3333 244442 12344555666666665544
No 257
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=97.09 E-value=0.0053 Score=55.76 Aligned_cols=149 Identities=10% Similarity=0.032 Sum_probs=96.4
Q ss_pred HHHhccCCCccEEEEcCCCCCcCChhH-HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCC
Q 043239 62 SDTLSLLPALEIVVGSTAGIDHVDLQE-CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAY 140 (286)
Q Consensus 62 ~~~l~~~~~Lk~i~~~~~G~d~id~~~-~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~ 140 (286)
..++.++. -.|..+.. .+=.+.. ++-.+|+|.|..+...-++ .+|+=++.+.++
T Consensus 94 arvLs~~~--D~IviR~~--~~~~~~~lA~~s~vPVINa~~~~~HPt--Q~LaDl~Ti~e~------------------- 148 (335)
T 1dxh_A 94 ARVLGRMY--DAIEYRGF--KQEIVEELAKFAGVPVFNGLTDEYHPT--QMLADVLTMREH------------------- 148 (335)
T ss_dssp HHHHHHHC--SEEEEECS--CHHHHHHHHHHSSSCEEEEECSSCCHH--HHHHHHHHHHHT-------------------
T ss_pred HHHHHhhC--CEEEEecC--ChhHHHHHHHhCCCCEEcCCCCCCCcH--HHHHHHHHHHHH-------------------
Confidence 34444443 44555543 2322333 3445799999765333332 334444443332
Q ss_pred CCcccCCCCEEEEEcCC--hHHHHHHHHhccCCCEEEEECCCCCCCC--------------C--cccccCHHHhhcCCCE
Q 043239 141 PLGSTLGGKRVGIVGLG--SIGSEVAKRLVPFGCSIAYTSRKKKPGV--------------S--YPFYANVSGLAADSDV 202 (286)
Q Consensus 141 ~~~~~l~g~~vgIiG~G--~iG~~~A~~l~~~g~~V~~~~r~~~~~~--------------~--~~~~~~l~e~l~~aDi 202 (286)
.|..+.|.+|+++|=| +++.+++..+..+|++|.+..+..-... + +....+++|+++++|+
T Consensus 149 -~g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDv 227 (335)
T 1dxh_A 149 -SDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDF 227 (335)
T ss_dssp -CSSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSE
T ss_pred -cCCCcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCE
Confidence 1224789999999986 9999999999999999998887543222 1 2235789999999999
Q ss_pred EEEecc----C----Chh-----hhhcccHHHHhcC-CCCcEEEEcCC
Q 043239 203 LIVCCA----L----TEE-----THHMINKDVMTAL-GKEGVIINVGR 236 (286)
Q Consensus 203 V~~~lp----~----~~~-----t~~~i~~~~l~~m-k~g~ilvn~sr 236 (286)
|.+-.= . ..+ ...-++.+.++.+ ||+++|.-+.-
T Consensus 228 vytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP 275 (335)
T 1dxh_A 228 VHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLP 275 (335)
T ss_dssp EEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECSC
T ss_pred EEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCCC
Confidence 987322 0 011 2356789999999 99999999853
No 258
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.09 E-value=0.00076 Score=61.60 Aligned_cols=103 Identities=15% Similarity=0.161 Sum_probs=69.3
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEE-EEECCCCCCCC------C----cccccCHHHhhc--CCCEEEEeccCChhhh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSI-AYTSRKKKPGV------S----YPFYANVSGLAA--DSDVLIVCCALTEETH 214 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V-~~~~r~~~~~~------~----~~~~~~l~e~l~--~aDiV~~~lp~~~~t~ 214 (286)
.+|||||+|.||+.+++.+... ++++ .+++++.++.. + ...+.+++++++ +.|+|++++|......
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 86 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHVE 86 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHHH
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHHHH
Confidence 5899999999999999998865 5676 47888765321 2 234678999986 5999999998442211
Q ss_pred hcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhCCeeE
Q 043239 215 HMINKDVMTALGKEG-VIINV-GRGALIDEKELVHFLVRGSLVE 256 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~-ilvn~-srg~~vd~~al~~al~~~~i~g 256 (286)
-....++.|. +++.- -.-++-+.+.|.++.++.++..
T Consensus 87 -----~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~ 125 (362)
T 1ydw_A 87 -----WAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQI 125 (362)
T ss_dssp -----HHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCE
T ss_pred -----HHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEE
Confidence 2223455665 55543 1234456678888888776653
No 259
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.09 E-value=0.00051 Score=58.66 Aligned_cols=62 Identities=13% Similarity=0.112 Sum_probs=43.3
Q ss_pred CEEEEEcCChHHHHHHHH--hccCCCEEE-EECCCCCCCC----C--cccccCHHHhhcCCCEEEEeccCC
Q 043239 149 KRVGIVGLGSIGSEVAKR--LVPFGCSIA-YTSRKKKPGV----S--YPFYANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~--l~~~g~~V~-~~~r~~~~~~----~--~~~~~~l~e~l~~aDiV~~~lp~~ 210 (286)
.+++|+|+|.+|+.+++. ....|+++. ++|.++++.. + +....++++++++.|++++++|..
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs~ 156 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPAV 156 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCch
Confidence 479999999999999994 345578765 6777766543 2 123567889887779999999843
No 260
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.09 E-value=0.00068 Score=60.64 Aligned_cols=110 Identities=21% Similarity=0.223 Sum_probs=70.3
Q ss_pred CEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCC---------------C--cccccCHHHhhcCCCEEEEeccC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGV---------------S--YPFYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~---------------~--~~~~~~l~e~l~~aDiV~~~lp~ 209 (286)
++|+|+|.|.+|.++|..|...|. +|..+|++.+... . .....+ .+.+++||+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 589999999999999999988787 8999998764321 0 111235 7889999999998653
Q ss_pred Chh---hh--------hcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHH----HhCCeeEEE--eec
Q 043239 210 TEE---TH--------HMINK--DVMTALGKEGVIINVGRGALIDEKELVHFL----VRGSLVELV--LMC 261 (286)
Q Consensus 210 ~~~---t~--------~~i~~--~~l~~mk~g~ilvn~srg~~vd~~al~~al----~~~~i~ga~--lDv 261 (286)
... ++ .++.. +.+....|++++++++ .++|.-..+-.- ...++.|.+ ||.
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~t~~~~k~~g~p~~rviG~gt~LD~ 148 (294)
T 1oju_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMTYIMWKESGKPRNEVFGMGNQLDS 148 (294)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHHHHHHHHSCCCTTSEEECSHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHHHHHHHHhcCCCHHHEeecccccHH
Confidence 211 11 11110 1233447889999997 555544333221 134566653 664
No 261
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.05 E-value=0.00091 Score=60.54 Aligned_cols=109 Identities=18% Similarity=0.236 Sum_probs=67.3
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC---------------Ccccc-cCHHHhhcCCCEEEEeccC
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV---------------SYPFY-ANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~---------------~~~~~-~~l~e~l~~aDiV~~~lp~ 209 (286)
..++|+|||.|.||.++|..+...|+ +|..+|+..+... ..... .+-.+.+++||+|+++.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGV 83 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCc
Confidence 35799999999999999999987777 9999999875421 11111 1224789999999998643
Q ss_pred Chhhhhc-----c--c----HH---HHhcCCCCcEEEEcCCCcccCHHH--HHHH--HHhCCeeEEE
Q 043239 210 TEETHHM-----I--N----KD---VMTALGKEGVIINVGRGALIDEKE--LVHF--LVRGSLVELV 258 (286)
Q Consensus 210 ~~~t~~~-----i--~----~~---~l~~mk~g~ilvn~srg~~vd~~a--l~~a--l~~~~i~ga~ 258 (286)
. ...++ + | ++ .+....|++++++++. ++|.-. +.+. +...++.|.+
T Consensus 84 p-~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN--Pvd~~t~~~~k~sg~p~~rviG~~ 147 (321)
T 3p7m_A 84 P-RKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN--PLDIMVNMLQKFSGVPDNKIVGMA 147 (321)
T ss_dssp C-CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS--SHHHHHHHHHHHHCCCGGGEEEEC
T ss_pred C-CCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC--chHHHHHHHHHhcCCCHHHEEeec
Confidence 2 11111 1 1 11 1222358899999954 444433 3332 2224566654
No 262
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.05 E-value=0.0013 Score=60.09 Aligned_cols=101 Identities=15% Similarity=0.172 Sum_probs=63.5
Q ss_pred CEEEEEcCChHHHH-HHHHhccC-CCEEE-EECCCCCCCC----CcccccCHHHhhcC--CCEEEEeccCChhhhhcccH
Q 043239 149 KRVGIVGLGSIGSE-VAKRLVPF-GCSIA-YTSRKKKPGV----SYPFYANVSGLAAD--SDVLIVCCALTEETHHMINK 219 (286)
Q Consensus 149 ~~vgIiG~G~iG~~-~A~~l~~~-g~~V~-~~~r~~~~~~----~~~~~~~l~e~l~~--aDiV~~~lp~~~~t~~~i~~ 219 (286)
.+|||||+|.||+. .+..++.. +++|+ +++++.++.. +...+.++++++++ .|+|++|+|....... ..
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~--~~ 83 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYEY--AG 83 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTCTTSEEESCSHHHHTCTTCCEEEECSCGGGHHHH--HH
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHH--HH
Confidence 58999999999997 77777665 67775 6788765422 23456899999977 8999999985433221 12
Q ss_pred HHHhcCCCC-cEEEEcC-CCcccCHHHHHHHHHhCCe
Q 043239 220 DVMTALGKE-GVIINVG-RGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 220 ~~l~~mk~g-~ilvn~s-rg~~vd~~al~~al~~~~i 254 (286)
.. ++.| .+++.-- .-++-+.+.|.++.++.++
T Consensus 84 ~a---l~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~ 117 (362)
T 3fhl_A 84 MA---LEAGKNVVVEKPFTSTTKQGEELIALAKKKGL 117 (362)
T ss_dssp HH---HHTTCEEEEESSCCSSHHHHHHHHHHHHHHTC
T ss_pred HH---HHCCCeEEEecCCCCCHHHHHHHHHHHHHcCC
Confidence 22 3333 3444322 2234455556655554333
No 263
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=97.04 E-value=0.002 Score=61.42 Aligned_cols=98 Identities=14% Similarity=0.192 Sum_probs=70.9
Q ss_pred cCCCCEEEEEcCC----------hHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhh
Q 043239 145 TLGGKRVGIVGLG----------SIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETH 214 (286)
Q Consensus 145 ~l~g~~vgIiG~G----------~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~ 214 (286)
.+.|++|+|+|+- .-...+++.|...|.+|.+||+............++++.++++|.|++++. .++-+
T Consensus 350 ~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~ad~vvi~t~-~~~f~ 428 (478)
T 3g79_A 350 KMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNYPGVEISDNLEEVVRNADAIVVLAG-HSAYS 428 (478)
T ss_dssp CSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCCBTTBCEESCHHHHHTTCSEEEECSC-CHHHH
T ss_pred CCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCcccccCcceecCHHHHHhcCCEEEEecC-CHHHH
Confidence 4689999999975 347889999999999999999977643333345789999999999999875 34444
Q ss_pred hcccHHHHhcCC-CCcEEEEcCCCcccCHHHH
Q 043239 215 HMINKDVMTALG-KEGVIINVGRGALIDEKEL 245 (286)
Q Consensus 215 ~~i~~~~l~~mk-~g~ilvn~srg~~vd~~al 245 (286)
.+--....+.|+ +..+|+|. |+- .|.+.+
T Consensus 429 ~~d~~~~~~~~~~~~~~i~D~-rn~-~~~~~~ 458 (478)
T 3g79_A 429 SLKADWAKKVSAKANPVIIDG-RNV-IEPDEF 458 (478)
T ss_dssp SCCHHHHHHHHCCSSCEEEES-SSC-SCHHHH
T ss_pred hhhHHHHHHHhccCCCEEEEC-CCC-CCHHHH
Confidence 332234556677 47899996 554 554433
No 264
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.03 E-value=0.00065 Score=63.88 Aligned_cols=103 Identities=15% Similarity=0.143 Sum_probs=65.3
Q ss_pred CCEEEEEcCChHHH-HHHHHhccC-CCEE-EEECCCCCCCC------Ccc-----cccCHHHhhc--CCCEEEEeccCCh
Q 043239 148 GKRVGIVGLGSIGS-EVAKRLVPF-GCSI-AYTSRKKKPGV------SYP-----FYANVSGLAA--DSDVLIVCCALTE 211 (286)
Q Consensus 148 g~~vgIiG~G~iG~-~~A~~l~~~-g~~V-~~~~r~~~~~~------~~~-----~~~~l~e~l~--~aDiV~~~lp~~~ 211 (286)
-.+|||||+|.||+ .+++.+... ++++ .+++++.+... +.. .+.+++++++ +.|+|++++|...
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~ 162 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSL 162 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGG
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchh
Confidence 45899999999997 899998875 5675 47888765321 222 3678999987 7999999998543
Q ss_pred hhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhCCee
Q 043239 212 ETHHMINKDVMTALGKEG-VIINV-GRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 212 ~t~~~i~~~~l~~mk~g~-ilvn~-srg~~vd~~al~~al~~~~i~ 255 (286)
.... ....++.|. +++.- ..-++-+.+.|.++.++.++.
T Consensus 163 h~~~-----~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~ 203 (433)
T 1h6d_A 163 HAEF-----AIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKK 203 (433)
T ss_dssp HHHH-----HHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCC
T ss_pred HHHH-----HHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCe
Confidence 3221 222344453 55542 122334455666666654443
No 265
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.02 E-value=0.0028 Score=56.32 Aligned_cols=101 Identities=17% Similarity=0.206 Sum_probs=64.4
Q ss_pred CEEEEEcCChHHHHHHHHhcc----CCCEEE-EECCCCCCCC-CcccccCHHHhhc--CCCEEEEeccCChhhhhcccHH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVP----FGCSIA-YTSRKKKPGV-SYPFYANVSGLAA--DSDVLIVCCALTEETHHMINKD 220 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~----~g~~V~-~~~r~~~~~~-~~~~~~~l~e~l~--~aDiV~~~lp~~~~t~~~i~~~ 220 (286)
.+|||||+|.||+..++.+.. -+++++ +++++..... +.. +.+++++++ +.|+|++++|...... +
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H~~--~--- 81 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGSLDEVR-QISLEDALRSQEIDVAYICSESSSHED--Y--- 81 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCEETTEE-BCCHHHHHHCSSEEEEEECSCGGGHHH--H---
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHHHHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhHHH--H---
Confidence 589999999999999998875 356665 6777542211 222 478999987 6899999998543222 1
Q ss_pred HHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHhCCee
Q 043239 221 VMTALGKEG-VIINV-GRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 221 ~l~~mk~g~-ilvn~-srg~~vd~~al~~al~~~~i~ 255 (286)
....++.|. +++.- ..-.+-+.+.|.++.++.+..
T Consensus 82 ~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 118 (294)
T 1lc0_A 82 IRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV 118 (294)
T ss_dssp HHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence 223334443 66663 222444557777777665544
No 266
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=97.00 E-value=0.011 Score=53.68 Aligned_cols=133 Identities=17% Similarity=0.175 Sum_probs=88.3
Q ss_pred HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcC-ChHHHHHHHHh
Q 043239 89 CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGL-GSIGSEVAKRL 167 (286)
Q Consensus 89 ~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~-G~iG~~~A~~l 167 (286)
++..+|+|.|..+...-++ .+|+=++.+.++. +.|..+.|.+|+++|= +++..+++..+
T Consensus 136 A~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~------------------~~G~~l~glkva~vGD~~rva~Sl~~~~ 195 (339)
T 4a8t_A 136 ANCATIPVINGMSDYNHPT--QELGDLCTMVEHL------------------PEGKKLEDCKVVFVGDATQVCFSLGLIT 195 (339)
T ss_dssp HHHCSSCEEECCCSSCCHH--HHHHHHHHHHHTC------------------CTTCCGGGCEEEEESSCCHHHHHHHHHH
T ss_pred HHhCCCCEEECCCCCcCcH--HHHHHHHHHHHHh------------------hcCCCCCCCEEEEECCCchhHHHHHHHH
Confidence 4556899999876433232 3344344433331 0132588999999994 78999999999
Q ss_pred ccCCCEEEEECCCCCCCC--------------C--cccccCHHHhhcCCCEEEEec----cCC----hh----h--hhcc
Q 043239 168 VPFGCSIAYTSRKKKPGV--------------S--YPFYANVSGLAADSDVLIVCC----ALT----EE----T--HHMI 217 (286)
Q Consensus 168 ~~~g~~V~~~~r~~~~~~--------------~--~~~~~~l~e~l~~aDiV~~~l----p~~----~~----t--~~~i 217 (286)
..+|++|.+..+..-... + +....+++ +++++|+|.+-+ ... .+ . ...+
T Consensus 196 ~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~w~smg~~~~~~~er~~~~~~~y~v 274 (339)
T 4a8t_A 196 TKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQV 274 (339)
T ss_dssp HHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECCSSCCTTSCCCHHHHHHHHTTTTCB
T ss_pred HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecCcccCCchhhhhHHHHHHhcccccc
Confidence 999999998887543322 1 22357888 999999998632 110 11 1 2557
Q ss_pred cHHHHhcCCCCcEEEEcC---CCcccCH
Q 043239 218 NKDVMTALGKEGVIINVG---RGALIDE 242 (286)
Q Consensus 218 ~~~~l~~mk~g~ilvn~s---rg~~vd~ 242 (286)
+.+.++.+|++++|.-+. ||.=|+.
T Consensus 275 t~ell~~ak~dai~mHcLPa~Rg~EIt~ 302 (339)
T 4a8t_A 275 NQEMMDRAGANCKFMHCLPATRGEEVTD 302 (339)
T ss_dssp CHHHHHHHCTTCEEEECSCCCBTTTBCH
T ss_pred CHHHHHhcCCCcEEECCCCCCCCCeeCH
Confidence 888999999999999986 5654443
No 267
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.98 E-value=0.0005 Score=58.78 Aligned_cols=84 Identities=13% Similarity=0.085 Sum_probs=56.3
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC----CCccc----c---cCHHHh-hcCCCEEEEeccCChhhhh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG----VSYPF----Y---ANVSGL-AADSDVLIVCCALTEETHH 215 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~----~~~~~----~---~~l~e~-l~~aDiV~~~lp~~~~t~~ 215 (286)
.+++.|+|+|.+|+.+++.|...|+ |++.+++++.. .+... . ..++++ +.++|.|++++|....+.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~- 86 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETI- 86 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHHH-
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHHH-
Confidence 4689999999999999999999999 99999876532 11111 1 233344 788999999988543332
Q ss_pred cccHHHHhcCCCC-cEEEEc
Q 043239 216 MINKDVMTALGKE-GVIINV 234 (286)
Q Consensus 216 ~i~~~~l~~mk~g-~ilvn~ 234 (286)
.-......+.++ .+++.+
T Consensus 87 -~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 87 -HCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp -HHHHHHHHHCSSSEEEEEC
T ss_pred -HHHHHHHHHCCCCeEEEEE
Confidence 223445556666 445544
No 268
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.97 E-value=0.00072 Score=61.03 Aligned_cols=116 Identities=16% Similarity=0.238 Sum_probs=70.6
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCC---------------CcccccCHHHhhcCCCEEEEeccC
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGV---------------SYPFYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~---------------~~~~~~~l~e~l~~aDiV~~~lp~ 209 (286)
..++|+|||.|.+|.+++..|...|. +|..+|...++.. ......+..+.+++||+|+++.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~ 84 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGA 84 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCC
Confidence 34699999999999999999887674 8999998653211 001112446779999999999864
Q ss_pred Chhh---h--------hcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHH--HHhCCeeEE--Eeecc
Q 043239 210 TEET---H--------HMINK--DVMTALGKEGVIINVGRGALIDEKELVHF--LVRGSLVEL--VLMCL 262 (286)
Q Consensus 210 ~~~t---~--------~~i~~--~~l~~mk~g~ilvn~srg~~vd~~al~~a--l~~~~i~ga--~lDv~ 262 (286)
.... + .++.. +.+....|++++++++..-=+....+.+. +...++.|. .||..
T Consensus 85 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~k~~~~p~~rviG~gt~lD~~ 154 (317)
T 3d0o_A 85 AQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGSGTILDSA 154 (317)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHhCCCHHHEEecCccccHH
Confidence 3211 0 11110 12223378999999864433333444443 334466555 25643
No 269
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.97 E-value=0.00037 Score=66.41 Aligned_cols=111 Identities=12% Similarity=0.098 Sum_probs=72.3
Q ss_pred CCEEEEEcCChH-HHHHHHHhccC-----CCEEEEECCCCCCCC---------------C--cccccCHHHhhcCCCEEE
Q 043239 148 GKRVGIVGLGSI-GSEVAKRLVPF-----GCSIAYTSRKKKPGV---------------S--YPFYANVSGLAADSDVLI 204 (286)
Q Consensus 148 g~~vgIiG~G~i-G~~~A~~l~~~-----g~~V~~~~r~~~~~~---------------~--~~~~~~l~e~l~~aDiV~ 204 (286)
.++|+|||.|.. |.++|..|... +.+|..||+..+... . .....++++.+++||+|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 469999999998 66677666544 568999999775311 1 112357888999999999
Q ss_pred EeccCChh---hh----------------------------hccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHh
Q 043239 205 VCCALTEE---TH----------------------------HMIN--KDVMTALGKEGVIINVGRGALIDEKELVHFLVR 251 (286)
Q Consensus 205 ~~lp~~~~---t~----------------------------~~i~--~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~ 251 (286)
+++|.... ++ .++. .+.+....|+++++|++..--+-+.++.+....
T Consensus 108 iaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~~p~ 187 (472)
T 1u8x_X 108 AHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPN 187 (472)
T ss_dssp ECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHSTT
T ss_pred EcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhCCC
Confidence 99986321 11 1110 012233468999999988766666666665544
Q ss_pred CCeeEEE
Q 043239 252 GSLVELV 258 (286)
Q Consensus 252 ~~i~ga~ 258 (286)
.++.|.+
T Consensus 188 ~rViG~c 194 (472)
T 1u8x_X 188 SKILNIC 194 (472)
T ss_dssp CCEEECC
T ss_pred CCEEEeC
Confidence 4666654
No 270
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.97 E-value=0.00049 Score=65.17 Aligned_cols=64 Identities=19% Similarity=0.181 Sum_probs=48.4
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------C-cc----cc---cCHHHhhcCCCEEEEeccCC
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------S-YP----FY---ANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~-~~----~~---~~l~e~l~~aDiV~~~lp~~ 210 (286)
.+++|+|+|.|.||+.+++.|...|++|.+++|+.++.. + .. .. .++.++++++|+|+.+.|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 367999999999999999999999999999998754311 1 10 11 24557788999999999864
No 271
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=96.96 E-value=0.0097 Score=54.40 Aligned_cols=133 Identities=17% Similarity=0.183 Sum_probs=88.3
Q ss_pred HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEc-CChHHHHHHHHh
Q 043239 89 CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVG-LGSIGSEVAKRL 167 (286)
Q Consensus 89 ~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG-~G~iG~~~A~~l 167 (286)
+...+|+|.|..+...-++ .+|+=++.+.++. +.|..+.|.+|+++| .+++..+++..+
T Consensus 114 A~~~~vPVINag~~~~HPt--QaLaDl~TI~E~~------------------~~G~~l~glkva~vGD~~rva~Sl~~~~ 173 (355)
T 4a8p_A 114 ANCATIPVINGMSDYNHPT--QELGDLCTMVEHL------------------PEGKKLEDCKVVFVGDATQVCFSLGLIT 173 (355)
T ss_dssp HHHCSSCEEECCCSSCCHH--HHHHHHHHHHHTC------------------CTTCCGGGCEEEEESCCCHHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHh------------------hcCCCCCCCEEEEECCCchhHHHHHHHH
Confidence 4556899999876333232 3344344433331 013248899999999 478999999999
Q ss_pred ccCCCEEEEECCCCCCCC--------------C--cccccCHHHhhcCCCEEEEec----cCC----hh-----h-hhcc
Q 043239 168 VPFGCSIAYTSRKKKPGV--------------S--YPFYANVSGLAADSDVLIVCC----ALT----EE-----T-HHMI 217 (286)
Q Consensus 168 ~~~g~~V~~~~r~~~~~~--------------~--~~~~~~l~e~l~~aDiV~~~l----p~~----~~-----t-~~~i 217 (286)
..+|++|.+..+..-... + +....+++ +++++|+|.+-+ ... .+ . ...+
T Consensus 174 ~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~w~smgq~~~~~~er~~~~~~~y~v 252 (355)
T 4a8p_A 174 TKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQV 252 (355)
T ss_dssp HHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECCSSEETTEECCHHHHHHHHTTTTCB
T ss_pred HHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecccccCcchhhhhHHHHHHhcccccc
Confidence 999999998887543322 1 22357888 999999998622 110 11 1 2557
Q ss_pred cHHHHhcCCCCcEEEEcC---CCcccCH
Q 043239 218 NKDVMTALGKEGVIINVG---RGALIDE 242 (286)
Q Consensus 218 ~~~~l~~mk~g~ilvn~s---rg~~vd~ 242 (286)
+.+.++.+|++++|.-+. ||.=|+.
T Consensus 253 t~ell~~ak~dai~MHcLPa~Rg~EIt~ 280 (355)
T 4a8p_A 253 NQEMMDRAGANCKFMHCLPATRGEEVTD 280 (355)
T ss_dssp CHHHHHHHCTTCEEEECSCCCBTTTBCH
T ss_pred CHHHHHhcCCCcEEECCCCCCCCCeeCH
Confidence 888999999999999986 5644443
No 272
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.95 E-value=0.0011 Score=61.12 Aligned_cols=61 Identities=31% Similarity=0.415 Sum_probs=46.9
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-C---c---cccc---CHHHhhcCCCEEEE
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-S---Y---PFYA---NVSGLAADSDVLIV 205 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-~---~---~~~~---~l~e~l~~aDiV~~ 205 (286)
-+.|++|+|+|.|.+|+.+++.++.+|++|+++|+.+.... . . ..+. .+.++++++|+|+.
T Consensus 11 ~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 11 ILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeee
Confidence 47899999999999999999999999999999987654321 1 0 0122 36678889999854
No 273
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=96.94 E-value=0.0064 Score=54.79 Aligned_cols=154 Identities=16% Similarity=0.239 Sum_probs=99.3
Q ss_pred HHHhccCCCccEEEEcCCCCCcCChhH-HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCC
Q 043239 62 SDTLSLLPALEIVVGSTAGIDHVDLQE-CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAY 140 (286)
Q Consensus 62 ~~~l~~~~~Lk~i~~~~~G~d~id~~~-~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~ 140 (286)
..+++++. -.|..+... +=.+.. ++-.+|+|.|..+...-++ .+|+=++.+.++. |
T Consensus 95 arvls~~~--D~iviR~~~--~~~~~~lA~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~---------g-------- 151 (315)
T 1pvv_A 95 ARVLSRYV--DAIMARVYD--HKDVEDLAKYATVPVINGLSDFSHPC--QALADYMTIWEKK---------G-------- 151 (315)
T ss_dssp HHHHTTTC--SEEEEECSS--HHHHHHHHHHCSSCEEEEECSSCCHH--HHHHHHHHHHHHH---------S--------
T ss_pred HHHHHHhC--cEEEEecCc--hHHHHHHHHhCCCCEEcCCCCCCCcH--HHHHHHHHHHHHh---------C--------
Confidence 34445543 455555432 222333 3445799999755433332 3444444433321 1
Q ss_pred CCcccCCCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCC--------------C--cccccCHHHhhcCCCEE
Q 043239 141 PLGSTLGGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGV--------------S--YPFYANVSGLAADSDVL 203 (286)
Q Consensus 141 ~~~~~l~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~--------------~--~~~~~~l~e~l~~aDiV 203 (286)
.+.|.+|+++|= +++..+++..+..+|++|.+..+..-... + +....+++|+++++|+|
T Consensus 152 ----~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvv 227 (315)
T 1pvv_A 152 ----TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVI 227 (315)
T ss_dssp ----CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEE
T ss_pred ----CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEE
Confidence 378999999996 89999999999999999998887543322 1 22357899999999999
Q ss_pred EEeccC-------Chh-----hhhcccHHHHhcCCCCcEEEEcC---CCcccCH
Q 043239 204 IVCCAL-------TEE-----THHMINKDVMTALGKEGVIINVG---RGALIDE 242 (286)
Q Consensus 204 ~~~lp~-------~~~-----t~~~i~~~~l~~mk~g~ilvn~s---rg~~vd~ 242 (286)
.+-.=. .++ ....++.+.++.+|++++|.-+. ||.=|+.
T Consensus 228 y~~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~lP~~Rg~EI~~ 281 (315)
T 1pvv_A 228 YTDVWASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVTD 281 (315)
T ss_dssp EECCCCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBCH
T ss_pred EEcceeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCCCCCCCCccCH
Confidence 883210 111 23567899999999999999996 4554443
No 274
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.93 E-value=0.00066 Score=61.61 Aligned_cols=91 Identities=20% Similarity=0.339 Sum_probs=59.7
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCC---------------CcccccCHHHhhcCCCEEEEeccC
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGV---------------SYPFYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~---------------~~~~~~~l~e~l~~aDiV~~~lp~ 209 (286)
..++|+|||.|.||.++|..|...|. +|..+|+..++.. ......+..+.+++||+|+++.+.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~ 83 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGA 83 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEeccc
Confidence 35699999999999999999988776 8999998654321 011112234678999999998753
Q ss_pred Chh---hh-hcc--c----HH---HHhcCCCCcEEEEcCCC
Q 043239 210 TEE---TH-HMI--N----KD---VMTALGKEGVIINVGRG 237 (286)
Q Consensus 210 ~~~---t~-~~i--~----~~---~l~~mk~g~ilvn~srg 237 (286)
... ++ .++ + ++ .+....|.+++++++..
T Consensus 84 p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNP 124 (326)
T 3pqe_A 84 NQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNP 124 (326)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCh
Confidence 211 11 111 1 11 23334678999999754
No 275
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=96.92 E-value=0.0057 Score=55.58 Aligned_cols=131 Identities=13% Similarity=0.113 Sum_probs=88.2
Q ss_pred HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcC-ChHHHHHHHHh
Q 043239 89 CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGL-GSIGSEVAKRL 167 (286)
Q Consensus 89 ~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~-G~iG~~~A~~l 167 (286)
++..+|+|.|..+...-++ .+|+=++.+.++. | .+.|.+|+++|= +++..+++..+
T Consensus 143 A~~~~vPVINag~~~~HPt--QaLaDl~TI~E~~--------------------G-~l~glkva~vGD~~nva~Sl~~~~ 199 (340)
T 4ep1_A 143 AKESSIPVINGLTDDHHPC--QALADLMTIYEET--------------------N-TFKGIKLAYVGDGNNVCHSLLLAS 199 (340)
T ss_dssp HHHCSSCEEEEECSSCCHH--HHHHHHHHHHHHH--------------------S-CCTTCEEEEESCCCHHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHh--------------------C-CCCCCEEEEECCCchhHHHHHHHH
Confidence 4456799999765333222 3333333333321 1 278999999995 67899999999
Q ss_pred ccCCCEEEEECCCCCCCC--------------C--cccccCHHHhhcCCCEEEEeccCC------hh-----hhhcccHH
Q 043239 168 VPFGCSIAYTSRKKKPGV--------------S--YPFYANVSGLAADSDVLIVCCALT------EE-----THHMINKD 220 (286)
Q Consensus 168 ~~~g~~V~~~~r~~~~~~--------------~--~~~~~~l~e~l~~aDiV~~~lp~~------~~-----t~~~i~~~ 220 (286)
..+|++|.+..+..-... + +....+++|+++++|+|.+-.=.. ++ ....++.+
T Consensus 200 ~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~w~smg~e~~~~~~~~~~~y~vt~e 279 (340)
T 4ep1_A 200 AKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVWMSMGQEGEEEKYTLFQPYQINKE 279 (340)
T ss_dssp HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECCC------CHHHHHHHHGGGCBCHH
T ss_pred HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecCccCCCCCchHHHHHHhccccCCHH
Confidence 999999998887543322 1 223578999999999997643211 00 13457899
Q ss_pred HHhcCCCCcEEEEcC---CCcccCH
Q 043239 221 VMTALGKEGVIINVG---RGALIDE 242 (286)
Q Consensus 221 ~l~~mk~g~ilvn~s---rg~~vd~ 242 (286)
.++.+|++++|.-+. ||.=|+.
T Consensus 280 ll~~ak~dai~MHcLPa~Rg~EIt~ 304 (340)
T 4ep1_A 280 LVKHAKQTYHFLHCLPAHREEEVTG 304 (340)
T ss_dssp HHTTSCTTCEEEECSCCCBTTTBCH
T ss_pred HHHhcCCCcEEECCCCCCCCceeCH
Confidence 999999999999997 6754443
No 276
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=96.91 E-value=0.0053 Score=54.93 Aligned_cols=90 Identities=17% Similarity=0.166 Sum_probs=69.7
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHhccC-CCEEEEECCCCCCCC-------C--cccccCHHHhhcCCCEEEEeccCCh-
Q 043239 146 LGGKRVGIVGL---GSIGSEVAKRLVPF-GCSIAYTSRKKKPGV-------S--YPFYANVSGLAADSDVLIVCCALTE- 211 (286)
Q Consensus 146 l~g~~vgIiG~---G~iG~~~A~~l~~~-g~~V~~~~r~~~~~~-------~--~~~~~~l~e~l~~aDiV~~~lp~~~- 211 (286)
+.|.+|+++|= |++..+++..+..+ |++|.+..+..-... + +....+++|+++++|+|.+-.--.+
T Consensus 147 l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~er 226 (299)
T 1pg5_A 147 IDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKER 226 (299)
T ss_dssp STTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTT
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCccccc
Confidence 78999999997 69999999999999 999998886443221 2 2235789999999999977543221
Q ss_pred -----h-h----hhcccHHHHhcCCCCcEEEEcC
Q 043239 212 -----E-T----HHMINKDVMTALGKEGVIINVG 235 (286)
Q Consensus 212 -----~-t----~~~i~~~~l~~mk~g~ilvn~s 235 (286)
+ . ...++.+.++.+|++++|.-+.
T Consensus 227 ~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 260 (299)
T 1pg5_A 227 FVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPL 260 (299)
T ss_dssp SSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCS
T ss_pred ccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCC
Confidence 1 1 3557889999999999999886
No 277
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.91 E-value=0.003 Score=52.92 Aligned_cols=62 Identities=19% Similarity=0.204 Sum_probs=48.2
Q ss_pred CEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCCC----------ccc-ccCHHHhhcCCCEEEEeccCC
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGVS----------YPF-YANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~----------~~~-~~~l~e~l~~aDiV~~~lp~~ 210 (286)
|+|.|.| .|.||+.+++.|.+.|++|.+.+|+..+... ... ..++.++++++|+|+.+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence 4789999 8999999999999999999999998754321 112 234566788999999887654
No 278
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.88 E-value=0.0014 Score=59.90 Aligned_cols=101 Identities=15% Similarity=0.173 Sum_probs=63.8
Q ss_pred CEEEEEcCChHHHH-HHHHhccC-CCEEE-EECCCCCCC----CCcccccCHHHhhc--CCCEEEEeccCChhhhhcccH
Q 043239 149 KRVGIVGLGSIGSE-VAKRLVPF-GCSIA-YTSRKKKPG----VSYPFYANVSGLAA--DSDVLIVCCALTEETHHMINK 219 (286)
Q Consensus 149 ~~vgIiG~G~iG~~-~A~~l~~~-g~~V~-~~~r~~~~~----~~~~~~~~l~e~l~--~aDiV~~~lp~~~~t~~~i~~ 219 (286)
.+|||||+|.||+. .++.++.. +++|+ +++++.++. .+...+.+++++++ +.|+|++|+|........
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~--- 82 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYEHT--- 82 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHHHHH---
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcHHHHHHH---
Confidence 58999999999997 78877765 67765 678776432 13445789999997 689999999965432221
Q ss_pred HHHhcCCCCc-EEEEcC-CCcccCHHHHHHHHHhCCe
Q 043239 220 DVMTALGKEG-VIINVG-RGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 220 ~~l~~mk~g~-ilvn~s-rg~~vd~~al~~al~~~~i 254 (286)
...++.|. +++.-- .-.+-+.+.|.++.++.++
T Consensus 83 --~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~ 117 (358)
T 3gdo_A 83 --MACIQAGKHVVMEKPMTATAEEGETLKRAADEKGV 117 (358)
T ss_dssp --HHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTC
T ss_pred --HHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCC
Confidence 22233332 444321 2234455556665555433
No 279
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=96.86 E-value=0.0059 Score=55.22 Aligned_cols=153 Identities=14% Similarity=0.158 Sum_probs=97.9
Q ss_pred HHhccCCCccEEEEcCCCCCcCChhH-HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCC
Q 043239 63 DTLSLLPALEIVVGSTAGIDHVDLQE-CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYP 141 (286)
Q Consensus 63 ~~l~~~~~Lk~i~~~~~G~d~id~~~-~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~ 141 (286)
.+++++. -.|..+... +=.+.. ++-.+|+|.|..+...-++ .+|+=++.+.++. |
T Consensus 108 rvLs~~~--D~iviR~~~--~~~~~~lA~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~---------g--------- 163 (325)
T 1vlv_A 108 RVLGRMV--DAIMFRGYK--QETVEKLAEYSGVPVYNGLTDEFHPT--QALADLMTIEENF---------G--------- 163 (325)
T ss_dssp HHHHTTC--SEEEEESSC--HHHHHHHHHHHCSCEEESCCSSCCHH--HHHHHHHHHHHHH---------S---------
T ss_pred HHHHHhC--CEEEEECCC--hHHHHHHHHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHh---------C---------
Confidence 4444543 445555432 222333 3344799999765433332 3444444433321 1
Q ss_pred CcccCCCCEEEEEcCC--hHHHHHHHHhccCCCEEEEECCCCCCCC--------------C--cccccCHHHhhcCCCEE
Q 043239 142 LGSTLGGKRVGIVGLG--SIGSEVAKRLVPFGCSIAYTSRKKKPGV--------------S--YPFYANVSGLAADSDVL 203 (286)
Q Consensus 142 ~~~~l~g~~vgIiG~G--~iG~~~A~~l~~~g~~V~~~~r~~~~~~--------------~--~~~~~~l~e~l~~aDiV 203 (286)
.+.|.+|+++|=| ++..+++..+..+|++|.+..+..-... + +....+++|+++++|+|
T Consensus 164 ---~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvv 240 (325)
T 1vlv_A 164 ---RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVV 240 (325)
T ss_dssp ---CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEE
T ss_pred ---CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEE
Confidence 3789999999985 9999999999999999998887543222 1 22367899999999999
Q ss_pred EEeccC-------Chh-----hhhcccHHHHhcC-CCCcEEEEcC---CCcccCH
Q 043239 204 IVCCAL-------TEE-----THHMINKDVMTAL-GKEGVIINVG---RGALIDE 242 (286)
Q Consensus 204 ~~~lp~-------~~~-----t~~~i~~~~l~~m-k~g~ilvn~s---rg~~vd~ 242 (286)
.+-.=. .++ ....++++.++.+ |++++|.-+. ||.=|+.
T Consensus 241 yt~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~LP~~Rg~EI~~ 295 (325)
T 1vlv_A 241 YTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTY 295 (325)
T ss_dssp EECCCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBCH
T ss_pred EeccccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCCCCCCCcccCH
Confidence 873210 011 2356789999999 9999999996 4544443
No 280
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.86 E-value=0.0025 Score=57.96 Aligned_cols=102 Identities=15% Similarity=0.202 Sum_probs=63.1
Q ss_pred CEEEEEcCChHHH-HHHHHhccC-CCEEE-EECCCCCCC-------CCcccccCHHHhhcC--CCEEEEeccCChhhhhc
Q 043239 149 KRVGIVGLGSIGS-EVAKRLVPF-GCSIA-YTSRKKKPG-------VSYPFYANVSGLAAD--SDVLIVCCALTEETHHM 216 (286)
Q Consensus 149 ~~vgIiG~G~iG~-~~A~~l~~~-g~~V~-~~~r~~~~~-------~~~~~~~~l~e~l~~--aDiV~~~lp~~~~t~~~ 216 (286)
.+|||||+|.||+ ..+..++.. +++|+ +++++.... .+...+.++++++++ .|+|++++|.......
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~- 81 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTHYDL- 81 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGHHHH-
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHHHHH-
Confidence 4899999999999 577777665 67875 778772111 133456899999976 8999999985433221
Q ss_pred ccHHHHhcCCCC-cEEEEcC-CCcccCHHHHHHHHHhCCee
Q 043239 217 INKDVMTALGKE-GVIINVG-RGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 217 i~~~~l~~mk~g-~ilvn~s-rg~~vd~~al~~al~~~~i~ 255 (286)
.... ++.| .+++.-- .-++-+.+.|.++.++.++.
T Consensus 82 -~~~a---l~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~ 118 (349)
T 3i23_A 82 -AKQA---ILAGKSVIVEKPFCDTLEHAEELFALGQEKGVV 118 (349)
T ss_dssp -HHHH---HHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred -HHHH---HHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCe
Confidence 1222 3344 3444322 22344555666666665543
No 281
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.85 E-value=0.0013 Score=59.66 Aligned_cols=92 Identities=22% Similarity=0.318 Sum_probs=59.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCC--------------CcccccCHHHhhcCCCEEEEeccC
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGV--------------SYPFYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~--------------~~~~~~~l~e~l~~aDiV~~~lp~ 209 (286)
-.+++|+|+|.|.||.++|..|...|. ++..+|+..++.. ......+..+.+++||+|+++...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 356799999999999999999987776 8999998654221 111123445789999999998643
Q ss_pred Chh---hh-hcc--c----HH---HHhcCCCCcEEEEcCCC
Q 043239 210 TEE---TH-HMI--N----KD---VMTALGKEGVIINVGRG 237 (286)
Q Consensus 210 ~~~---t~-~~i--~----~~---~l~~mk~g~ilvn~srg 237 (286)
... ++ .++ | ++ .+....|.+++++++..
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNP 127 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 127 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECSSS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCc
Confidence 211 11 111 1 11 23334678999999643
No 282
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.85 E-value=0.00082 Score=60.74 Aligned_cols=115 Identities=15% Similarity=0.219 Sum_probs=69.5
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCC--------------CcccccCHHHhhcCCCEEEEeccCCh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGV--------------SYPFYANVSGLAADSDVLIVCCALTE 211 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~--------------~~~~~~~l~e~l~~aDiV~~~lp~~~ 211 (286)
.++|+|||.|.+|.+++..|...+. ++..+|...++.. ......+..+.+++||+|+++.+...
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~ 84 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQ 84 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCC
Confidence 3699999999999999999987665 8999998654321 01111244677999999999976432
Q ss_pred hh-----------hhcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHH--HHhCCeeEE--Eeecc
Q 043239 212 ET-----------HHMINK--DVMTALGKEGVIINVGRGALIDEKELVHF--LVRGSLVEL--VLMCL 262 (286)
Q Consensus 212 ~t-----------~~~i~~--~~l~~mk~g~ilvn~srg~~vd~~al~~a--l~~~~i~ga--~lDv~ 262 (286)
.. ..++.. +.+....|.+++++++..-=+....+.+. +...++-|. .||..
T Consensus 85 ~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~gt~LD~~ 152 (318)
T 1ez4_A 85 KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGSGTSLDSS 152 (318)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEeccccchHH
Confidence 11 011110 12223378999999854433333444443 334466555 25643
No 283
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.83 E-value=0.0049 Score=55.27 Aligned_cols=124 Identities=15% Similarity=0.195 Sum_probs=84.5
Q ss_pred HhhcCeEEEecC-CCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCC---hHHHHHH
Q 043239 89 CRRRGILVTNAG-NAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLG---SIGSEVA 164 (286)
Q Consensus 89 ~~~~gI~v~n~~-~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G---~iG~~~A 164 (286)
++..+|+|.|.. +...-++ .+|+=++.+.++. | .+.|.+|+++|=| ++..+++
T Consensus 110 a~~~~vPVINagdg~~~HPt--QaLaDl~Ti~e~~--------------------g-~l~glkva~vGD~~~~rva~Sl~ 166 (304)
T 3r7f_A 110 VSQVNIPILNAGDGCGQHPT--QSLLDLMTIYEEF--------------------N-TFKGLTVSIHGDIKHSRVARSNA 166 (304)
T ss_dssp HHHCSSCEEESCCTTSCCHH--HHHHHHHHHHHHH--------------------S-CCTTCEEEEESCCTTCHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCcCcH--HHHHHHHHHHHHh--------------------C-CCCCCEEEEEcCCCCcchHHHHH
Confidence 344689999986 3333333 2333333333221 1 3789999999975 6999999
Q ss_pred HHhccCCCEEEEECCCCCCCC--CcccccCHHHhhcCCCEEEEeccCC----------h-hhhhcccHHHHhcCCCCcEE
Q 043239 165 KRLVPFGCSIAYTSRKKKPGV--SYPFYANVSGLAADSDVLIVCCALT----------E-ETHHMINKDVMTALGKEGVI 231 (286)
Q Consensus 165 ~~l~~~g~~V~~~~r~~~~~~--~~~~~~~l~e~l~~aDiV~~~lp~~----------~-~t~~~i~~~~l~~mk~g~il 231 (286)
..+..+|++|.+..+..-... ......+++|+++++|+|.+-.--. + .....++.+.++.+|++++|
T Consensus 167 ~~~~~~G~~v~~~~P~~~~~~~~~~g~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~ 246 (304)
T 3r7f_A 167 EVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEAVESSDVVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKRHAII 246 (304)
T ss_dssp HHHHHTTCEEEEESCGGGSCTTCSSCEECCHHHHHHHCSEEEECCCCTTTCCSSCCSTTHHHHHSBCHHHHTTSCTTCEE
T ss_pred HHHHHcCCEEEEECCCccCcchhhcCccCCHHHHhCCCCEEEeccchhhccccchhHHHHhCCCccCHHHHhhcCCCCEE
Confidence 999999999998876432221 1224568999999999998742110 1 12355788999999999999
Q ss_pred EEcC
Q 043239 232 INVG 235 (286)
Q Consensus 232 vn~s 235 (286)
.-+.
T Consensus 247 mHcl 250 (304)
T 3r7f_A 247 MHPA 250 (304)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 9886
No 284
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.83 E-value=0.0016 Score=58.98 Aligned_cols=62 Identities=16% Similarity=0.249 Sum_probs=48.7
Q ss_pred CCCEEEEEcCChHHH-HHHHHhccC-CCEEE-EECCCCCCCCCcccccCHHHhhcC---CCEEEEeccC
Q 043239 147 GGKRVGIVGLGSIGS-EVAKRLVPF-GCSIA-YTSRKKKPGVSYPFYANVSGLAAD---SDVLIVCCAL 209 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~-~~A~~l~~~-g~~V~-~~~r~~~~~~~~~~~~~l~e~l~~---aDiV~~~lp~ 209 (286)
+..+|||||+|.||+ ..++.++.. +++|+ +++++.+. .+...+.++++++++ .|+|++++|.
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~-~g~~~~~~~~~ll~~~~~vD~V~i~tp~ 91 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV-EGVNSYTTIEAMLDAEPSIDAVSLCMPP 91 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC-TTSEEESSHHHHHHHCTTCCEEEECSCH
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh-cCCCccCCHHHHHhCCCCCCEEEEeCCc
Confidence 346999999999999 788888875 67765 67777654 345567899999865 8999999984
No 285
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=96.82 E-value=0.021 Score=51.54 Aligned_cols=161 Identities=14% Similarity=0.134 Sum_probs=101.0
Q ss_pred CceEEEEeCC-CCC--------CHHHhccCCCccEEEEcCCCCCcCChhH-HhhcCeEEEecCCCCCcChHHHHHHHHHH
Q 043239 48 SVRAILCLGP-SPL--------TSDTLSLLPALEIVVGSTAGIDHVDLQE-CRRRGILVTNAGNAFSEDGADYVVGLLVD 117 (286)
Q Consensus 48 ~~d~i~~~~~-~~~--------~~~~l~~~~~Lk~i~~~~~G~d~id~~~-~~~~gI~v~n~~~~~~~~vAE~~l~~~L~ 117 (286)
+.+++..... ..+ +..+++++. -.|..+..+ +=.+.. ++..+|+|.|..+...-++ .+|+=++.
T Consensus 72 Gg~~i~l~~~~ss~~kgEsl~DTarvls~~~--D~iviR~~~--~~~~~~lA~~~~vPVINa~~~~~HPt--QaLaDl~T 145 (321)
T 1oth_A 72 GGHPCFLTTQDIHLGVNESLTDTARVLSSMA--DAVLARVYK--QSDLDTLAKEASIPIINGLSDLYHPI--QILADYLT 145 (321)
T ss_dssp TCEEEEEETTTSCBTTTBCHHHHHHHHHHHC--SEEEEECSC--HHHHHHHHHHCSSCEEESCCSSCCHH--HHHHHHHH
T ss_pred CCeEEEECCCcCcCCCCCCHHHHHHHHHHhC--CEEEEeCCC--hhHHHHHHHhCCCCEEcCCCCCCCcH--HHHHHHHH
Confidence 6777765321 111 234444443 345444332 222233 3445799999766433333 34444444
Q ss_pred HHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCC-hHHHHHHHHhccCCCEEEEECCCCCCCC-----------
Q 043239 118 VLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLG-SIGSEVAKRLVPFGCSIAYTSRKKKPGV----------- 185 (286)
Q Consensus 118 ~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G-~iG~~~A~~l~~~g~~V~~~~r~~~~~~----------- 185 (286)
+.++. | .+.|.+|+++|=| ++..+++..+..+|++|.+..+..-...
T Consensus 146 i~e~~---------g------------~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a 204 (321)
T 1oth_A 146 LQEHY---------S------------SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYA 204 (321)
T ss_dssp HHHHH---------S------------CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHH
T ss_pred HHHHh---------C------------CcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHH
Confidence 33321 1 3789999999974 5889999999999999998887554321
Q ss_pred ---C--cccccCHHHhhcCCCEEEEec----cCChh--------hhhcccHHHHhcCCCCcEEEEcC
Q 043239 186 ---S--YPFYANVSGLAADSDVLIVCC----ALTEE--------THHMINKDVMTALGKEGVIINVG 235 (286)
Q Consensus 186 ---~--~~~~~~l~e~l~~aDiV~~~l----p~~~~--------t~~~i~~~~l~~mk~g~ilvn~s 235 (286)
+ +....+++|+++++|+|.+-+ ....+ ....++.+.++.+|++++|.-+.
T Consensus 205 ~~~G~~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~l 271 (321)
T 1oth_A 205 KENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCL 271 (321)
T ss_dssp HHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECS
T ss_pred HHcCCeEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCC
Confidence 1 233678999999999998832 21111 11457899999999999999996
No 286
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.81 E-value=0.0032 Score=52.79 Aligned_cols=62 Identities=16% Similarity=0.230 Sum_probs=48.2
Q ss_pred CEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCCC-----------cccccCHHHhhcCCCEEEEeccCC
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGVS-----------YPFYANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~-----------~~~~~~l~e~l~~aDiV~~~lp~~ 210 (286)
++|.|.| .|.+|+.+++.|...|++|.+.+|+..+... .....++.++++++|+|+.+....
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~ 78 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG 78 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence 6899999 6999999999999999999999998664321 111235667889999998886543
No 287
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.80 E-value=0.0014 Score=62.58 Aligned_cols=102 Identities=17% Similarity=0.222 Sum_probs=66.6
Q ss_pred CCCEEEEEcC----ChHHHHHHHHhccC--CCEEE-EECCCCCCCC------Cc---ccccCHHHhhc--CCCEEEEecc
Q 043239 147 GGKRVGIVGL----GSIGSEVAKRLVPF--GCSIA-YTSRKKKPGV------SY---PFYANVSGLAA--DSDVLIVCCA 208 (286)
Q Consensus 147 ~g~~vgIiG~----G~iG~~~A~~l~~~--g~~V~-~~~r~~~~~~------~~---~~~~~l~e~l~--~aDiV~~~lp 208 (286)
.-.+|||||+ |.||...++.|+.. +++|+ ++|++.+... +. ..+.+++++++ +.|+|++|+|
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp 117 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVK 117 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSC
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCC
Confidence 3468999999 99999999999876 67764 7888765321 22 25789999996 6899999998
Q ss_pred CChhhhhcccHHHHhcCCCC-------cEEEEc-CCCcccCHHHHHHHHHhCC
Q 043239 209 LTEETHHMINKDVMTALGKE-------GVIINV-GRGALIDEKELVHFLVRGS 253 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~mk~g-------~ilvn~-srg~~vd~~al~~al~~~~ 253 (286)
...... + ....++.| .+++.- ..-.+-+.++|.++.++.+
T Consensus 118 ~~~H~~--~---~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g 165 (479)
T 2nvw_A 118 VPEHYE--V---VKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRA 165 (479)
T ss_dssp HHHHHH--H---HHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCT
T ss_pred cHHHHH--H---HHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcC
Confidence 443222 1 12223334 466664 1223445566666666554
No 288
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.80 E-value=0.0032 Score=57.09 Aligned_cols=106 Identities=19% Similarity=0.257 Sum_probs=68.6
Q ss_pred CEEEEEcCChHHHHHHHHhccC---------CCEEE-EECCCCCCCCC-------------ccccc--CHHHhhc--CCC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF---------GCSIA-YTSRKKKPGVS-------------YPFYA--NVSGLAA--DSD 201 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~---------g~~V~-~~~r~~~~~~~-------------~~~~~--~l~e~l~--~aD 201 (286)
.+|||+|+|.||+.+++.+... +.+|. +++++...... ...+. +++++++ +.|
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iD 82 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYD 82 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCS
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCC
Confidence 4899999999999999998764 66765 56665432111 11233 8889885 489
Q ss_pred EEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCccc-CHHHHHHHHHhCCee
Q 043239 202 VLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALI-DEKELVHFLVRGSLV 255 (286)
Q Consensus 202 iV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~v-d~~al~~al~~~~i~ 255 (286)
+|+.|+|....... ..+.....|+.|.-+|-..-+.+. ..+.|.+..++.+..
T Consensus 83 vVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~ 136 (327)
T 3do5_A 83 VLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVR 136 (327)
T ss_dssp EEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCc
Confidence 99999985432111 122345567788877766555443 566777777776654
No 289
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=96.80 E-value=0.008 Score=54.28 Aligned_cols=131 Identities=20% Similarity=0.230 Sum_probs=87.8
Q ss_pred HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcC-ChHHHHHHHHh
Q 043239 89 CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGL-GSIGSEVAKRL 167 (286)
Q Consensus 89 ~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~-G~iG~~~A~~l 167 (286)
++..+|+|.|..+...-++ .+|+=++.+.++. | .+.|.+|+++|= +++..+++..+
T Consensus 121 A~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~---------g------------~l~glkva~vGD~~rva~Sl~~~~ 177 (323)
T 3gd5_A 121 AHYAGIPVINALTDHEHPC--QVVADLLTIRENF---------G------------RLAGLKLAYVGDGNNVAHSLLLGC 177 (323)
T ss_dssp HHHHCSCEEEEECSSCCHH--HHHHHHHHHHHHH---------S------------CCTTCEEEEESCCCHHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHh---------C------------CCCCCEEEEECCCCcHHHHHHHHH
Confidence 3455899999766333332 3333333333321 1 378999999994 78999999999
Q ss_pred ccCCCEEEEECCCCCCCC--------------C--cccccCHHHhhcCCCEEEEeccCC--hh----------hhhcccH
Q 043239 168 VPFGCSIAYTSRKKKPGV--------------S--YPFYANVSGLAADSDVLIVCCALT--EE----------THHMINK 219 (286)
Q Consensus 168 ~~~g~~V~~~~r~~~~~~--------------~--~~~~~~l~e~l~~aDiV~~~lp~~--~~----------t~~~i~~ 219 (286)
..+|++|.+..+..-... + +....+++|+++++|+|.+-.=-. .+ ....++.
T Consensus 178 ~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~wqs~g~~~~~~~~~~~~~~y~vt~ 257 (323)
T 3gd5_A 178 AKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDVWTSMGQEAETQHRLQLFEQYQINA 257 (323)
T ss_dssp HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCCC---------CCHHHHTTCCBCH
T ss_pred HHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEeceecCCCcccchHHHHHhhccCCCH
Confidence 999999998887543322 1 224578999999999997642111 00 1245789
Q ss_pred HHHhcCCCCcEEEEcC---CCcccCH
Q 043239 220 DVMTALGKEGVIINVG---RGALIDE 242 (286)
Q Consensus 220 ~~l~~mk~g~ilvn~s---rg~~vd~ 242 (286)
+.++.+|++++|.-+. ||.=|+.
T Consensus 258 ell~~ak~dai~mHclPa~Rg~EI~~ 283 (323)
T 3gd5_A 258 ALLNCAAAEAIVLHCLPAHRGEEITD 283 (323)
T ss_dssp HHHHTSCTTCEEEECSCCCBTTTBCH
T ss_pred HHHhhcCCCcEEECCCCCCCCceeCH
Confidence 9999999999999985 6644443
No 290
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.78 E-value=0.0046 Score=56.63 Aligned_cols=91 Identities=14% Similarity=0.235 Sum_probs=58.7
Q ss_pred CEEEEEc-CChHHHHHHHHhccCC-----C-EEEEEC-CC-CCCCC-----Ccc-----cc--cCHHHhhcCCCEEEEec
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVPFG-----C-SIAYTS-RK-KKPGV-----SYP-----FY--ANVSGLAADSDVLIVCC 207 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~~g-----~-~V~~~~-r~-~~~~~-----~~~-----~~--~~l~e~l~~aDiV~~~l 207 (286)
++|+|+| .|.+|+.+.+.|...+ . ++.... ++ ..+.. ... .. .+. +.+.++|+|+.|+
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~-~~~~~~DvVf~al 88 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEA-AVLGGHDAVFLAL 88 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCH-HHHTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCH-HHhcCCCEEEECC
Confidence 6899999 9999999999998876 3 666553 22 21110 000 11 132 3466899999999
Q ss_pred cCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHH
Q 043239 208 ALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELV 246 (286)
Q Consensus 208 p~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~ 246 (286)
|... .++..+.++.|..+||.|..--.+..+.+
T Consensus 89 g~~~------s~~~~~~~~~G~~vIDlSa~~R~~~~~~~ 121 (352)
T 2nqt_A 89 PHGH------SAVLAQQLSPETLIIDCGADFRLTDAAVW 121 (352)
T ss_dssp TTSC------CHHHHHHSCTTSEEEECSSTTTCSCHHHH
T ss_pred CCcc------hHHHHHHHhCCCEEEEECCCccCCcchhh
Confidence 8542 34444444678999999866555444443
No 291
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.76 E-value=0.0036 Score=59.15 Aligned_cols=98 Identities=20% Similarity=0.340 Sum_probs=70.1
Q ss_pred cccCCCCEEEEEcCC----------hHHHHHHHHhccCCCEEEEECCCCCCC-----CCcccccCHHHhhcCCCEEEEec
Q 043239 143 GSTLGGKRVGIVGLG----------SIGSEVAKRLVPFGCSIAYTSRKKKPG-----VSYPFYANVSGLAADSDVLIVCC 207 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G----------~iG~~~A~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~l~e~l~~aDiV~~~l 207 (286)
+..+.|++|+|+|+. .-...+++.|...|.+|.+||+..... .+.....++++.++++|.|++++
T Consensus 317 ~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t 396 (446)
T 4a7p_A 317 GGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQASKMLTDVEFVENPYAAADGADALVIVT 396 (446)
T ss_dssp TSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHHGGGCSSCCBCSCHHHHHTTBSEEEECS
T ss_pred cccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhHHHhcCCceEecChhHHhcCCCEEEEee
Confidence 345789999999997 678999999999999999999876321 13334568899999999999987
Q ss_pred cCChhhhhcccH-HHHhcCCCCcEEEEcCCCcccCHHHH
Q 043239 208 ALTEETHHMINK-DVMTALGKEGVIINVGRGALIDEKEL 245 (286)
Q Consensus 208 p~~~~t~~~i~~-~~l~~mk~g~ilvn~srg~~vd~~al 245 (286)
.- ++-+. ++- ...+.|+. .+++|. |+ +.+.+.+
T Consensus 397 ~~-~~f~~-~d~~~~~~~~~~-~~i~D~-r~-~~~~~~~ 430 (446)
T 4a7p_A 397 EW-DAFRA-LDLTRIKNSLKS-PVLVDL-RN-IYPPAEL 430 (446)
T ss_dssp CC-TTTTS-CCHHHHHTTBSS-CBEECS-SC-CSCHHHH
T ss_pred CC-HHhhc-CCHHHHHHhcCC-CEEEEC-CC-CCCHHHH
Confidence 53 33333 333 34555654 678986 54 3565444
No 292
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.75 E-value=0.00055 Score=62.20 Aligned_cols=90 Identities=11% Similarity=0.078 Sum_probs=59.4
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCCC----------------cccccCHHHhhcCCCEEEEecc
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGVS----------------YPFYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~~----------------~~~~~~l~e~l~~aDiV~~~lp 208 (286)
..++|+|+|.|.||..+|..+...|+ +|..+|...+...+ .....+.++ +++||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 56899999999999999999988776 89999986542210 011235554 899999999854
Q ss_pred CChh---hh-hcc--c----HH---HHhcCCCCcEEEEcCCC
Q 043239 209 LTEE---TH-HMI--N----KD---VMTALGKEGVIINVGRG 237 (286)
Q Consensus 209 ~~~~---t~-~~i--~----~~---~l~~mk~g~ilvn~srg 237 (286)
.... ++ .++ | ++ .+....|++++++++..
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNP 140 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPEL 140 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCc
Confidence 3210 11 111 1 11 22333789999999754
No 293
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=96.74 E-value=0.0066 Score=55.07 Aligned_cols=150 Identities=9% Similarity=0.028 Sum_probs=96.4
Q ss_pred HHHhccCCCccEEEEcCCCCCcCChhH-HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCC
Q 043239 62 SDTLSLLPALEIVVGSTAGIDHVDLQE-CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAY 140 (286)
Q Consensus 62 ~~~l~~~~~Lk~i~~~~~G~d~id~~~-~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~ 140 (286)
..++.++. -.|..+... +=.+.. ++-.+|+|.|..+...-++ .+|+=++.+.+++
T Consensus 93 arvLs~~~--D~IviR~~~--~~~~~~lA~~~~vPVINa~~~~~HPt--Q~LaDl~Ti~e~~------------------ 148 (333)
T 1duv_G 93 ARVLGRMY--DGIQYRGYG--QEIVETLAEYASVPVWNGLTNEFHPT--QLLADLLTMQEHL------------------ 148 (333)
T ss_dssp HHHHTTTC--SEEEEECSC--HHHHHHHHHHHSSCEEESCCSSCCHH--HHHHHHHHHHHHS------------------
T ss_pred HHHHHHhC--CEEEEEcCC--chHHHHHHHhCCCCeEcCCCCCCCch--HHHHHHHHHHHHh------------------
Confidence 34444543 455555432 222333 3344799999765333333 3444444433331
Q ss_pred CCcccCCCCEEEEEcCC--hHHHHHHHHhccCCCEEEEECCCCCCCC--------------C--cccccCHHHhhcCCCE
Q 043239 141 PLGSTLGGKRVGIVGLG--SIGSEVAKRLVPFGCSIAYTSRKKKPGV--------------S--YPFYANVSGLAADSDV 202 (286)
Q Consensus 141 ~~~~~l~g~~vgIiG~G--~iG~~~A~~l~~~g~~V~~~~r~~~~~~--------------~--~~~~~~l~e~l~~aDi 202 (286)
.|..+.|.+|+++|=| +++.+++..+..+|++|.+..+..-... + +....+++|+++++|+
T Consensus 149 -~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDv 227 (333)
T 1duv_G 149 -PGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADF 227 (333)
T ss_dssp -TTCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSE
T ss_pred -cCCCCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCE
Confidence 1224789999999986 9999999999999999998887543221 1 2236789999999999
Q ss_pred EEEecc----CC---hh------hhhcccHHHHhcC-CCCcEEEEcCC
Q 043239 203 LIVCCA----LT---EE------THHMINKDVMTAL-GKEGVIINVGR 236 (286)
Q Consensus 203 V~~~lp----~~---~~------t~~~i~~~~l~~m-k~g~ilvn~sr 236 (286)
|.+-.= .. .. ....++.+.++.+ |++++|.-+.-
T Consensus 228 vytd~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP 275 (333)
T 1duv_G 228 IYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLP 275 (333)
T ss_dssp EEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECSC
T ss_pred EEeCCccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCCC
Confidence 987322 00 11 2356789999999 99999999853
No 294
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.74 E-value=0.0067 Score=55.65 Aligned_cols=84 Identities=17% Similarity=0.326 Sum_probs=54.8
Q ss_pred CCEEEEEc-CChHHHHHHHHhccCCC-EEEEECCCCCCCCC-------cc-------cccCHHHhhcCCCEEEEeccCCh
Q 043239 148 GKRVGIVG-LGSIGSEVAKRLVPFGC-SIAYTSRKKKPGVS-------YP-------FYANVSGLAADSDVLIVCCALTE 211 (286)
Q Consensus 148 g~~vgIiG-~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~~-------~~-------~~~~l~e~l~~aDiV~~~lp~~~ 211 (286)
..+|+|+| +|.+|+.+++.|..... ++............ +. ...+ ++.++++|+|+.|+|...
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~~ 94 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHGT 94 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTTT
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCchh
Confidence 46899999 99999999999987653 77665443222110 00 1122 456678999999998543
Q ss_pred hhhhcccHHHHhcCCCCcEEEEcCCCc
Q 043239 212 ETHHMINKDVMTALGKEGVIINVGRGA 238 (286)
Q Consensus 212 ~t~~~i~~~~l~~mk~g~ilvn~srg~ 238 (286)
. .+.....+.|..+||.|..-
T Consensus 95 s------~~~a~~~~aG~~VId~sa~~ 115 (359)
T 1xyg_A 95 T------QEIIKELPTALKIVDLSADF 115 (359)
T ss_dssp H------HHHHHTSCTTCEEEECSSTT
T ss_pred H------HHHHHHHhCCCEEEECCccc
Confidence 2 22222237789999997543
No 295
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.73 E-value=0.0016 Score=61.34 Aligned_cols=63 Identities=10% Similarity=0.186 Sum_probs=48.4
Q ss_pred CCEEEEEcCChHHHHHHHHhccC-CCEEE-EECCCCCCCC---------C---ccccc----CHHHhhc--CCCEEEEec
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPF-GCSIA-YTSRKKKPGV---------S---YPFYA----NVSGLAA--DSDVLIVCC 207 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~-g~~V~-~~~r~~~~~~---------~---~~~~~----~l~e~l~--~aDiV~~~l 207 (286)
..+|||||+|.||+..++.+... +++|+ ++|++.++.. + ...+. +++++++ +.|+|++++
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~t 99 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSS 99 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECC
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcC
Confidence 35899999999999999988875 67764 7788765321 1 23456 8999997 589999999
Q ss_pred cCC
Q 043239 208 ALT 210 (286)
Q Consensus 208 p~~ 210 (286)
|..
T Consensus 100 p~~ 102 (444)
T 2ixa_A 100 PWE 102 (444)
T ss_dssp CGG
T ss_pred CcH
Confidence 854
No 296
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.70 E-value=0.0025 Score=57.17 Aligned_cols=62 Identities=18% Similarity=0.305 Sum_probs=48.9
Q ss_pred CEEEEEcC-ChHHHHHHHHhccCCCEEE-EECCCCCCCC------CcccccCHHHhh----------cCCCEEEEeccCC
Q 043239 149 KRVGIVGL-GSIGSEVAKRLVPFGCSIA-YTSRKKKPGV------SYPFYANVSGLA----------ADSDVLIVCCALT 210 (286)
Q Consensus 149 ~~vgIiG~-G~iG~~~A~~l~~~g~~V~-~~~r~~~~~~------~~~~~~~l~e~l----------~~aDiV~~~lp~~ 210 (286)
.++||||+ |.||+..++.++..+.+++ ++|++.+... ....+.++++++ .+.|+|++|+|..
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~ 83 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNH 83 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGG
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCch
Confidence 58999999 7899999999998888764 7788776521 233467888887 5799999999854
No 297
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.70 E-value=0.0018 Score=59.20 Aligned_cols=64 Identities=19% Similarity=0.173 Sum_probs=46.4
Q ss_pred CCEEEEEcCChHHHHHHHHhccC--------CCEEE-EECCCCCCCC------Cc-ccccCHHHhhcC--CCEEEEeccC
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPF--------GCSIA-YTSRKKKPGV------SY-PFYANVSGLAAD--SDVLIVCCAL 209 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~--------g~~V~-~~~r~~~~~~------~~-~~~~~l~e~l~~--aDiV~~~lp~ 209 (286)
--+|||||+|.||+.-++.++.. +++|+ ++|++.+... +. ..+.++++++++ .|+|++|+|.
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP~ 104 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTPN 104 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSCG
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCCh
Confidence 34899999999999888776643 46765 6788876643 22 356899999964 7999999995
Q ss_pred Ch
Q 043239 210 TE 211 (286)
Q Consensus 210 ~~ 211 (286)
.-
T Consensus 105 ~~ 106 (393)
T 4fb5_A 105 QF 106 (393)
T ss_dssp GG
T ss_pred HH
Confidence 43
No 298
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=96.69 E-value=0.0043 Score=55.72 Aligned_cols=147 Identities=16% Similarity=0.147 Sum_probs=94.2
Q ss_pred HHHhccCCCccEEEEcCCCCCcCChhHH-hhcCeEEEecCC-CCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCC
Q 043239 62 SDTLSLLPALEIVVGSTAGIDHVDLQEC-RRRGILVTNAGN-AFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGA 139 (286)
Q Consensus 62 ~~~l~~~~~Lk~i~~~~~G~d~id~~~~-~~~gI~v~n~~~-~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~ 139 (286)
..+++++. -.|..+... +=.+..+ +-.+|+|.|... ...-++ .+|+=++.+.++
T Consensus 94 arvls~~~--D~iviR~~~--~~~~~~la~~~~vPVINag~g~~~HPt--Q~LaDl~Ti~e~------------------ 149 (308)
T 1ml4_A 94 IKTVEQYC--DVIVIRHPK--EGAARLAAEVAEVPVINAGDGSNQHPT--QTLLDLYTIKKE------------------ 149 (308)
T ss_dssp HHHHTTTC--SEEEEEESS--TTHHHHHHHTCSSCEEEEEETTSCCHH--HHHHHHHHHHHH------------------
T ss_pred HHHHHHhC--cEEEEecCC--hhHHHHHHHhCCCCEEeCccCCccCcH--HHHHHHHHHHHH------------------
Confidence 45556553 444444332 2233333 445799999753 333333 233333333322
Q ss_pred CCCcccCCCCEEEEEcC---ChHHHHHHHHhccCCCEEEEECCCCCCCC----------C--cccccCHHHhhcCCCEEE
Q 043239 140 YPLGSTLGGKRVGIVGL---GSIGSEVAKRLVPFGCSIAYTSRKKKPGV----------S--YPFYANVSGLAADSDVLI 204 (286)
Q Consensus 140 ~~~~~~l~g~~vgIiG~---G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----------~--~~~~~~l~e~l~~aDiV~ 204 (286)
.| .+.|.+|+++|= |++..+++..+..+|++|.+..+..-... + +....+++|+++++|+|.
T Consensus 150 --~g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy 226 (308)
T 1ml4_A 150 --FG-RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLY 226 (308)
T ss_dssp --SS-CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEE
T ss_pred --hC-CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEE
Confidence 11 378999999997 58999999999999999998887543222 1 123478999999999998
Q ss_pred EeccCC------hhh-----hhcccHHHHhcCCCCcEEEEcC
Q 043239 205 VCCALT------EET-----HHMINKDVMTALGKEGVIINVG 235 (286)
Q Consensus 205 ~~lp~~------~~t-----~~~i~~~~l~~mk~g~ilvn~s 235 (286)
+-.=-. ++- ...++.+.++.+|++++|.-+.
T Consensus 227 t~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 268 (308)
T 1ml4_A 227 VTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPL 268 (308)
T ss_dssp ECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCS
T ss_pred ECCccccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCC
Confidence 743211 111 2456888889999999999885
No 299
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.69 E-value=0.0016 Score=60.15 Aligned_cols=62 Identities=18% Similarity=0.282 Sum_probs=48.8
Q ss_pred CEEEEEcCC-hHHHHHHHHhccC-CCEEE-EECCCCCCCC------CcccccCHHHhhcC--CCEEEEeccCC
Q 043239 149 KRVGIVGLG-SIGSEVAKRLVPF-GCSIA-YTSRKKKPGV------SYPFYANVSGLAAD--SDVLIVCCALT 210 (286)
Q Consensus 149 ~~vgIiG~G-~iG~~~A~~l~~~-g~~V~-~~~r~~~~~~------~~~~~~~l~e~l~~--aDiV~~~lp~~ 210 (286)
.+|||||+| .||..++..+... +++++ +++++.++.. ++..+.++++++++ .|+|++++|..
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~ 75 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQ 75 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGG
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcH
Confidence 589999999 9999999998875 56765 6788765421 34457899999975 99999999854
No 300
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.69 E-value=0.0078 Score=53.54 Aligned_cols=108 Identities=14% Similarity=0.101 Sum_probs=76.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCC--CCCcccccCHHHhhcCCCEEEEeccCCh----------hh
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKP--GVSYPFYANVSGLAADSDVLIVCCALTE----------ET 213 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~--~~~~~~~~~l~e~l~~aDiV~~~lp~~~----------~t 213 (286)
++|++|.++|........++.|...|++|.+...+... ..+.....++.+.++++|+|+...|... .+
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a~~ 84 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFSNE 84 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSCSS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccccccccceeccchHHHHhcCCEEEeccccccCCcccccccccC
Confidence 67889999999999999999999999999877533222 1233334556778899999987444221 12
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEE
Q 043239 214 HHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELV 258 (286)
Q Consensus 214 ~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~ 258 (286)
...++++.++.++++.+++ ++ +|..++.+++.+.+|....
T Consensus 85 ~~~~~~~~l~~~~~l~~i~-~g----~~~~d~~~~~~~~gi~v~~ 124 (300)
T 2rir_A 85 EVVLKQDHLDRTPAHCVIF-SG----ISNAYLENIAAQAKRKLVK 124 (300)
T ss_dssp CEECCHHHHHTSCTTCEEE-ES----SCCHHHHHHHHHTTCCEEE
T ss_pred CccchHHHHhhcCCCCEEE-Ee----cCCHHHHHHHHHCCCEEEe
Confidence 2236788999999988877 32 3777877888888776443
No 301
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.69 E-value=0.002 Score=56.23 Aligned_cols=62 Identities=23% Similarity=0.381 Sum_probs=47.1
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-Cc-------ccccCHHHhhcC-CCEEEEecc
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-SY-------PFYANVSGLAAD-SDVLIVCCA 208 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-~~-------~~~~~l~e~l~~-aDiV~~~lp 208 (286)
.+++|.|.|.|.+|+.+++.|.+.|++|++.+|+..... +. ....++.++++. +|+|+.+..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 357899999999999999999999999999998865432 11 112345566766 999987753
No 302
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.68 E-value=0.0066 Score=55.38 Aligned_cols=83 Identities=13% Similarity=0.185 Sum_probs=53.6
Q ss_pred CEEEEEc-CChHHHHHHHHhccCCC-EEEEECCCCCCCC----------C--cccccCHHHhhcCCCEEEEeccCChhhh
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV----------S--YPFYANVSGLAADSDVLIVCCALTEETH 214 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~----------~--~~~~~~l~e~l~~aDiV~~~lp~~~~t~ 214 (286)
++|+|+| .|.+|+.+.+.|..... ++....+...... + .....++++ +.++|+|+.|+|.... .
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~s-~ 82 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGVF-A 82 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTHH-H
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHHH-H
Confidence 5899999 79999999999987654 7665544322211 0 011234444 5789999999986533 2
Q ss_pred hcccHHHHhcCCCCcEEEEcCCC
Q 043239 215 HMINKDVMTALGKEGVIINVGRG 237 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~ilvn~srg 237 (286)
... .. .++.|..+|+.|..
T Consensus 83 ~~a-~~---~~~aG~~VId~Sa~ 101 (345)
T 2ozp_A 83 REF-DR---YSALAPVLVDLSAD 101 (345)
T ss_dssp HTH-HH---HHTTCSEEEECSST
T ss_pred HHH-HH---HHHCCCEEEEcCcc
Confidence 222 22 24678899999754
No 303
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.68 E-value=0.0032 Score=55.65 Aligned_cols=61 Identities=16% Similarity=0.329 Sum_probs=46.4
Q ss_pred CCEEEEEc-CChHHHHHHHHhcc-CCCEEEE-ECCCCCCCC------------CcccccCHHHhhcCCCEEEEecc
Q 043239 148 GKRVGIVG-LGSIGSEVAKRLVP-FGCSIAY-TSRKKKPGV------------SYPFYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 148 g~~vgIiG-~G~iG~~~A~~l~~-~g~~V~~-~~r~~~~~~------------~~~~~~~l~e~l~~aDiV~~~lp 208 (286)
..+|+|+| +|.||+.+++.+.. -++++.+ ++++..... +.....++++++.++|+|+-+.+
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~ 82 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTL 82 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSC
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCC
Confidence 36899999 99999999998875 4678764 687643211 23346799999999999988764
No 304
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.68 E-value=0.0019 Score=54.97 Aligned_cols=62 Identities=11% Similarity=0.142 Sum_probs=45.6
Q ss_pred CCEEEEEcCChHHHHHHHH--hccCCCEEE-EECCCCCCCC----C--cccccCHHHhhc-CCCEEEEeccCC
Q 043239 148 GKRVGIVGLGSIGSEVAKR--LVPFGCSIA-YTSRKKKPGV----S--YPFYANVSGLAA-DSDVLIVCCALT 210 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~--l~~~g~~V~-~~~r~~~~~~----~--~~~~~~l~e~l~-~aDiV~~~lp~~ 210 (286)
.++++|+|+|.+|+.+++. ... |++++ ++|.++++.. + .....+++++++ +.|+|++|+|..
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps~ 151 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPRE 151 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCch
Confidence 3589999999999999996 334 78765 5676665432 2 123567888886 589999999854
No 305
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.67 E-value=0.0027 Score=57.11 Aligned_cols=62 Identities=15% Similarity=0.288 Sum_probs=48.6
Q ss_pred CEEEEEcC-ChHHHHHHHHhccCCCEEE-EECCCCCCCC------CcccccCHHHhh-----------cCCCEEEEeccC
Q 043239 149 KRVGIVGL-GSIGSEVAKRLVPFGCSIA-YTSRKKKPGV------SYPFYANVSGLA-----------ADSDVLIVCCAL 209 (286)
Q Consensus 149 ~~vgIiG~-G~iG~~~A~~l~~~g~~V~-~~~r~~~~~~------~~~~~~~l~e~l-----------~~aDiV~~~lp~ 209 (286)
.++||||+ |.||...++.++..+.+++ ++|++.+... ....+.++++++ .+.|+|++++|.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPN 83 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCG
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCc
Confidence 58999999 7899999999998888764 6788765421 233467888887 568999999985
Q ss_pred C
Q 043239 210 T 210 (286)
Q Consensus 210 ~ 210 (286)
.
T Consensus 84 ~ 84 (318)
T 3oa2_A 84 Y 84 (318)
T ss_dssp G
T ss_pred H
Confidence 4
No 306
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.67 E-value=0.003 Score=56.36 Aligned_cols=103 Identities=16% Similarity=0.262 Sum_probs=68.6
Q ss_pred CEEEEEcC-ChHHHHHHHHhccCCCE-EEEECCCCC--CCCCcccccCHHHhhc--CCCEEEEeccCChhhhhcccHHHH
Q 043239 149 KRVGIVGL-GSIGSEVAKRLVPFGCS-IAYTSRKKK--PGVSYPFYANVSGLAA--DSDVLIVCCALTEETHHMINKDVM 222 (286)
Q Consensus 149 ~~vgIiG~-G~iG~~~A~~l~~~g~~-V~~~~r~~~--~~~~~~~~~~l~e~l~--~aDiV~~~lp~~~~t~~~i~~~~l 222 (286)
.+++|+|. |.+|+.+++.+...|++ |...++... ...+...+.+++++.. ..|++++++|. +.....+. +..
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~ii~vp~-~~~~~~v~-ea~ 91 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANASVIFVPA-PFAKDAVF-EAI 91 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCH-HHHHHHHH-HHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCEEEEccCH-HHHHHHHH-HHH
Confidence 45788898 99999999999988987 345565431 1235556789999988 89999999983 33343332 233
Q ss_pred hcCCCCcEEEEcCCC-cccCHHHHHHHHHhCCee
Q 043239 223 TALGKEGVIINVGRG-ALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 223 ~~mk~g~ilvn~srg-~~vd~~al~~al~~~~i~ 255 (286)
+ .... .+|..+.| +.-+.+.+.++.++..++
T Consensus 92 ~-~Gi~-~vVi~t~G~~~~~~~~l~~~A~~~gi~ 123 (294)
T 2yv1_A 92 D-AGIE-LIVVITEHIPVHDTMEFVNYAEDVGVK 123 (294)
T ss_dssp H-TTCS-EEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred H-CCCC-EEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 2 2222 24445544 334567888888887765
No 307
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.66 E-value=0.00098 Score=58.12 Aligned_cols=79 Identities=22% Similarity=0.316 Sum_probs=55.8
Q ss_pred ccCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCC------CC------------------------Cc--cc-
Q 043239 144 STLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKP------GV------------------------SY--PF- 189 (286)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~------~~------------------------~~--~~- 189 (286)
..|.+++|.|+|+|.+|..+++.|...|. ++.++|+..-. .. .. ..
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 45889999999999999999999999998 78888754311 00 00 00
Q ss_pred -----ccCHHHhhcCCCEEEEeccCChhhhhcccHHHHh
Q 043239 190 -----YANVSGLAADSDVLIVCCALTEETHHMINKDVMT 223 (286)
Q Consensus 190 -----~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~ 223 (286)
..++.++++++|+|+.++. +.+++..+++....
T Consensus 104 ~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~ 141 (251)
T 1zud_1 104 QQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVA 141 (251)
T ss_dssp CSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHH
T ss_pred eccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHH
Confidence 0134567788999988875 56677777665544
No 308
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.66 E-value=0.0012 Score=59.87 Aligned_cols=116 Identities=18% Similarity=0.227 Sum_probs=69.4
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCC--------------CcccccCHHHhhcCCCEEEEeccCC
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGV--------------SYPFYANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~--------------~~~~~~~l~e~l~~aDiV~~~lp~~ 210 (286)
..++|+|||.|.+|.+++..+...+. ++..+|...++.. ......+..+.+++||+|+++.+..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~ 87 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 44799999999999999999887665 8999998653321 0111124467799999999997643
Q ss_pred hhh-----------hhcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHH--HHhCCeeEE--Eeecc
Q 043239 211 EET-----------HHMINK--DVMTALGKEGVIINVGRGALIDEKELVHF--LVRGSLVEL--VLMCL 262 (286)
Q Consensus 211 ~~t-----------~~~i~~--~~l~~mk~g~ilvn~srg~~vd~~al~~a--l~~~~i~ga--~lDv~ 262 (286)
... ..++.. +.+....|.+++++++..-=+....+.+. +...++.|. .||..
T Consensus 88 ~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~gt~LD~~ 156 (326)
T 2zqz_A 88 QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGSGTSLDTA 156 (326)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEEccccchHH
Confidence 221 011100 11222368899999854433333334343 333466555 25643
No 309
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.65 E-value=0.0029 Score=51.96 Aligned_cols=63 Identities=22% Similarity=0.224 Sum_probs=48.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCC-----Ccc-------cccCHHHhhcCCCEEEEeccCC
Q 043239 148 GKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYP-------FYANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 148 g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~-------~~~~l~e~l~~aDiV~~~lp~~ 210 (286)
+++|.|.|. |.+|+.+++.|...|++|.+.+|+..... ... ...++.++++.+|+|+.+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~ 78 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence 479999997 99999999999999999999988765322 111 1234567788999998887643
No 310
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=96.64 E-value=0.013 Score=52.55 Aligned_cols=132 Identities=19% Similarity=0.190 Sum_probs=89.2
Q ss_pred HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCC-CCEEEEEc-CChHHHHHHHH
Q 043239 89 CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLG-GKRVGIVG-LGSIGSEVAKR 166 (286)
Q Consensus 89 ~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~-g~~vgIiG-~G~iG~~~A~~ 166 (286)
++..+|+|.|..+...-++ .+|+=++.+.++ .| .+. |.+|+++| .+++..+++..
T Consensus 109 A~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~--------------------~g-~l~~gl~va~vGD~~~va~Sl~~~ 165 (307)
T 3tpf_A 109 ARYSKAPVINALSELYHPT--QVLGDLFTIKEW--------------------NK-MQNGIAKVAFIGDSNNMCNSWLIT 165 (307)
T ss_dssp HHHCSSCEEEEECSSCCHH--HHHHHHHHHHHT--------------------TC-CGGGCCEEEEESCSSHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCcCcH--HHHHHHHHHHHH--------------------hC-CCCCCCEEEEEcCCCccHHHHHHH
Confidence 3456799999766433332 333333333332 11 377 99999999 46889999999
Q ss_pred hccCCCEEEEECCCCCCCC----------------CcccccCHHHhhcCCCEEEEec--cCCh--h--------hhhccc
Q 043239 167 LVPFGCSIAYTSRKKKPGV----------------SYPFYANVSGLAADSDVLIVCC--ALTE--E--------THHMIN 218 (286)
Q Consensus 167 l~~~g~~V~~~~r~~~~~~----------------~~~~~~~l~e~l~~aDiV~~~l--p~~~--~--------t~~~i~ 218 (286)
+..+|++|.+..+..-... .+....+++|+++++|+|.+-. +-.+ + ....++
T Consensus 166 ~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~ 245 (307)
T 3tpf_A 166 AAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDTWVSMGEENEKERKIKEFEGFMID 245 (307)
T ss_dssp HHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTGGGGHHHHHHHTGGGCBC
T ss_pred HHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecCcccCCchhhHHHHHHHhcccccC
Confidence 9999999998887543222 1123479999999999997754 0111 1 135578
Q ss_pred HHHHhcCCCCcEEEEcC---CCcccCHH
Q 043239 219 KDVMTALGKEGVIINVG---RGALIDEK 243 (286)
Q Consensus 219 ~~~l~~mk~g~ilvn~s---rg~~vd~~ 243 (286)
.+.++.+|++++|.-+. ||.=|+.+
T Consensus 246 ~e~l~~a~~~ai~mH~lPa~Rg~EI~~e 273 (307)
T 3tpf_A 246 EKAMSVANKDAILLHCLPAYRGYEVSEE 273 (307)
T ss_dssp HHHHHHSCTTCEEEECSCCCBTTTBCHH
T ss_pred HHHHHhcCCCcEEECCCCCCCCceeCHH
Confidence 99999999999999986 66555543
No 311
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.62 E-value=0.01 Score=55.90 Aligned_cols=106 Identities=15% Similarity=0.271 Sum_probs=71.4
Q ss_pred cccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCC---CCCcc---------------------------cccC
Q 043239 143 GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKP---GVSYP---------------------------FYAN 192 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~---~~~~~---------------------------~~~~ 192 (286)
+.++.|++|.|=|+|++|..+|+.|...|.+|++.+-+.-. ..+.. ...+
T Consensus 230 ~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~ 309 (450)
T 4fcc_A 230 GMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLE 309 (450)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEE
T ss_pred CCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEec
Confidence 34689999999999999999999999999998765422100 00000 0001
Q ss_pred HHHhh-cCCCEEEEeccCChhhhhcccHHHHhcCCCC--cEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 193 VSGLA-ADSDVLIVCCALTEETHHMINKDVMTALGKE--GVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 193 l~e~l-~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g--~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
-++++ ..|||.+=|. +.+.|+.+..+.++.. .++++-+.+.+..+ + .+.|.+++|.
T Consensus 310 ~~~i~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~e-A-~~iL~~rGIl 368 (450)
T 4fcc_A 310 GQQPWSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPTTIE-A-TELFQQAGVL 368 (450)
T ss_dssp TCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBCHH-H-HHHHHHTTCE
T ss_pred CcccccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCCCHH-H-HHHHHHCCCE
Confidence 11222 3699887764 5678998888888653 47888888886544 3 3677777775
No 312
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.61 E-value=0.0034 Score=57.70 Aligned_cols=61 Identities=20% Similarity=0.290 Sum_probs=46.4
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCC----------cccccCHHHhhcCCCEEEE
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVS----------YPFYANVSGLAADSDVLIV 205 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~l~e~l~~aDiV~~ 205 (286)
.+.+++|+|+|.|.+|+.+++.++.+|++|+++++.+..... ......+.++++++|+|+.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 467999999999999999999999999999999876543210 0011235667888998754
No 313
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=96.61 E-value=0.0085 Score=55.53 Aligned_cols=97 Identities=12% Similarity=0.083 Sum_probs=65.0
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHh---
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMT--- 223 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~--- 223 (286)
.-.++.|+|.|.+|+++++.++.+|++|+++|..++-... +-+..+|-++...|. ..+.. +.
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~~~--------~~fp~a~~~~~~~p~-----~~~~~--~~~~~ 267 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFATT--------ARFPTADEVVVDWPH-----RYLAA--QAEAG 267 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTSCT--------TTCSSSSEEEESCHH-----HHHHH--HHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhccc--------ccCCCceEEEeCChH-----HHHHh--hcccc
Confidence 3458999999999999999999999999999876543211 123455545444331 11111 11
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEE
Q 043239 224 ALGKEGVIINVGRGALIDEKELVHFLVRGSLVELV 258 (286)
Q Consensus 224 ~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~ 258 (286)
.+.+++.+|=+.++.-.|...|..+|+.....+.+
T Consensus 268 ~~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~YIG 302 (386)
T 2we8_A 268 AIDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIG 302 (386)
T ss_dssp CCCTTCEEEECCCCHHHHHHHHHHHTTSSCCSEEE
T ss_pred CCCCCcEEEEEECChHhHHHHHHHHhcCCCCCEEE
Confidence 15667777778888888888888888776444444
No 314
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.59 E-value=0.0019 Score=58.30 Aligned_cols=91 Identities=16% Similarity=0.254 Sum_probs=59.3
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCC--CCCC---------------Ccc-cccCHHHhhcCCCEEEEec
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKK--KPGV---------------SYP-FYANVSGLAADSDVLIVCC 207 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~--~~~~---------------~~~-~~~~l~e~l~~aDiV~~~l 207 (286)
..++|+|+|.|.||..+|..+...|+ +|..+|+++ .... ... ...+-.+.+++||+|+++.
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVITA 86 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEeC
Confidence 46799999999999999999998898 999999983 2111 001 1112246789999999986
Q ss_pred cCChh---hh-hcc------cHH---HHhcCCCCcEEEEcCCC
Q 043239 208 ALTEE---TH-HMI------NKD---VMTALGKEGVIINVGRG 237 (286)
Q Consensus 208 p~~~~---t~-~~i------~~~---~l~~mk~g~ilvn~srg 237 (286)
..... ++ .++ -++ .+....|++++++++..
T Consensus 87 g~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNP 129 (315)
T 3tl2_A 87 GIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNP 129 (315)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCCh
Confidence 42211 11 111 111 12223688999999754
No 315
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.59 E-value=0.002 Score=54.68 Aligned_cols=68 Identities=19% Similarity=0.208 Sum_probs=50.1
Q ss_pred cccCCCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cc-c-----cccCHHHhhcCCCEEEEeccCC
Q 043239 143 GSTLGGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SY-P-----FYANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 143 ~~~l~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~-~-----~~~~l~e~l~~aDiV~~~lp~~ 210 (286)
...+.||+|.|.|. |.||+.+++.|.+.|++|.+.+|+.++.. +. . ...++.+.+..+|+|+.+....
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 35689999999997 99999999999999999999998865421 11 1 1156677889999998887643
No 316
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.59 E-value=0.0029 Score=52.65 Aligned_cols=89 Identities=15% Similarity=0.261 Sum_probs=57.7
Q ss_pred CEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCC----Cccc-ccCH----HHhhcCCCEEEEeccCChhhhh---
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGV----SYPF-YANV----SGLAADSDVLIVCCALTEETHH--- 215 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----~~~~-~~~l----~e~l~~aDiV~~~lp~~~~t~~--- 215 (286)
|+|.|.| .|.||+.+++.|.+.|++|.+.+|+.++.. +... ..++ .+.+..+|+|+.+.........
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~ 80 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHV 80 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCCccccchHH
Confidence 5799999 599999999999999999999999764321 1110 0111 1678899999988765432211
Q ss_pred cccHHHHhcCCCC--cEEEEcCCC
Q 043239 216 MINKDVMTALGKE--GVIINVGRG 237 (286)
Q Consensus 216 ~i~~~~l~~mk~g--~ilvn~srg 237 (286)
......++.|+.. ..+|.+|..
T Consensus 81 ~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 81 TSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp HHHHHHHHHHCSCCSSEEEEECCC
T ss_pred HHHHHHHHHHHhcCCceEEEEecc
Confidence 1123455555443 567777654
No 317
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=96.55 E-value=0.0048 Score=55.17 Aligned_cols=104 Identities=20% Similarity=0.296 Sum_probs=68.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHhccCCCE-EEEECCCC--CCCCCcccccCHHHhhc--C-CCEEEEeccCChhhhhcccHH
Q 043239 148 GKRVGIVGL-GSIGSEVAKRLVPFGCS-IAYTSRKK--KPGVSYPFYANVSGLAA--D-SDVLIVCCALTEETHHMINKD 220 (286)
Q Consensus 148 g~~vgIiG~-G~iG~~~A~~l~~~g~~-V~~~~r~~--~~~~~~~~~~~l~e~l~--~-aDiV~~~lp~~~~t~~~i~~~ 220 (286)
..++.|+|. |.+|+.+++.+...|++ |..+++.. ....+...+.+++++.. . .|++++++|. +.+...+. +
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~~DvaIi~vp~-~~~~~~v~-e 90 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGSEVHGVPVYDSVKEALAEHPEINTSIVFVPA-PFAPDAVY-E 90 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHCTTCCEEEECCCG-GGHHHHHH-H
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCCEEEEecCH-HHHHHHHH-H
Confidence 345777798 99999999999988997 34566543 12235556789999887 5 9999999984 33444432 2
Q ss_pred HHhcCCCCcEEEEcCCC-cccCHHHHHHHHHhCCee
Q 043239 221 VMTALGKEGVIINVGRG-ALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 221 ~l~~mk~g~ilvn~srg-~~vd~~al~~al~~~~i~ 255 (286)
..+ .... .+|..+.| ..-+.+.+.++.++..++
T Consensus 91 a~~-~Gi~-~vVi~t~G~~~~~~~~l~~~A~~~gi~ 124 (297)
T 2yv2_A 91 AVD-AGIR-LVVVITEGIPVHDTMRFVNYARQKGAT 124 (297)
T ss_dssp HHH-TTCS-EEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHH-CCCC-EEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 322 2222 24445544 224567888888887765
No 318
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.55 E-value=0.015 Score=54.57 Aligned_cols=105 Identities=14% Similarity=0.252 Sum_probs=71.5
Q ss_pred cccCCCCEEEEEcCChHHHHHHHHhccCCCEEE-EECCCCCC--CC------------------Cc--ccccCHHHhh-c
Q 043239 143 GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIA-YTSRKKKP--GV------------------SY--PFYANVSGLA-A 198 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~-~~~r~~~~--~~------------------~~--~~~~~l~e~l-~ 198 (286)
|.++.|++|+|.|+|++|+.+|+.|...|.+|+ +.|++..- .. ++ ....+.++++ .
T Consensus 230 g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~ 309 (440)
T 3aog_A 230 GLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGL 309 (440)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTC
T ss_pred CCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcC
Confidence 456899999999999999999999999999987 55553210 00 00 0122445655 3
Q ss_pred CCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 199 DSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 199 ~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
.||+++-|.. .+.++.+....++ -.+++-.+.+.+. .+ -.+.|.+++|.
T Consensus 310 ~~DIlvPcA~-----~n~i~~~na~~l~-ak~VvEgAN~p~t-~e-A~~iL~~~GI~ 358 (440)
T 3aog_A 310 PVEFLVPAAL-----EKQITEQNAWRIR-ARIVAEGANGPTT-PA-ADDILLEKGVL 358 (440)
T ss_dssp CCSEEEECSS-----SSCBCTTTGGGCC-CSEEECCSSSCBC-HH-HHHHHHHHTCE
T ss_pred CCcEEEecCC-----cCccchhhHHHcC-CcEEEecCccccC-HH-HHHHHHHCCCE
Confidence 6999988753 4567777777774 4677888888864 33 34566666664
No 319
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=96.54 E-value=0.016 Score=52.97 Aligned_cols=136 Identities=13% Similarity=0.122 Sum_probs=85.1
Q ss_pred HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCC-CCCCCCcccCCCCEEEEEcCC-hHHHHHHHH
Q 043239 89 CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPD-HGAYPLGSTLGGKRVGIVGLG-SIGSEVAKR 166 (286)
Q Consensus 89 ~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~-~~~~~~~~~l~g~~vgIiG~G-~iG~~~A~~ 166 (286)
++..+|+|.|..+...-++ .+|+=++.+.+++ |.... .........+.|.+|+++|=+ ++..+++..
T Consensus 139 A~~s~vPVINag~d~~HPt--QaLaDl~TI~E~~---------G~~~~~~~~~~~~~~l~glkva~vGD~~nva~Sl~~~ 207 (353)
T 3sds_A 139 AKHSSVPVINALCDTFHPL--QAIADFLTIHESF---------ASQSATHGTHPSSLGLEGLKIAWVGDANNVLFDLAIA 207 (353)
T ss_dssp HHHCSSCEEEEECSSCCHH--HHHHHHHHHHHHT---------C--------CTTCCSCTTCEEEEESCCCHHHHHHHHH
T ss_pred HhhCCCCEEECCCCCCCcH--HHHHHHHHHHHHh---------CCCcccccccccccccCCCEEEEECCCchHHHHHHHH
Confidence 4556899999864332222 3343344433332 11100 000112345899999999954 688888889
Q ss_pred hccCCCEEEEECCCCCCCC------------------CcccccCHHHhhcCCCEEEEec--cCChh----------hhhc
Q 043239 167 LVPFGCSIAYTSRKKKPGV------------------SYPFYANVSGLAADSDVLIVCC--ALTEE----------THHM 216 (286)
Q Consensus 167 l~~~g~~V~~~~r~~~~~~------------------~~~~~~~l~e~l~~aDiV~~~l--p~~~~----------t~~~ 216 (286)
+..+|++|.+..+..-... .+....+++|+++++|+|++-. +..++ ....
T Consensus 208 l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvytd~w~smg~E~~~~~r~~~~~~y~ 287 (353)
T 3sds_A 208 ATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVTDTWISMGQETEKIKRLEAFKDFK 287 (353)
T ss_dssp HHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEECCC--------CHHHHHHTTTCC
T ss_pred HHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEeCCccCCchhhHHHHHHHHhhCce
Confidence 9999999998887543211 1224579999999999998632 21111 1245
Q ss_pred ccHHHHhc--CCCCcEEEEcC
Q 043239 217 INKDVMTA--LGKEGVIINVG 235 (286)
Q Consensus 217 i~~~~l~~--mk~g~ilvn~s 235 (286)
++.+.++. +|++++|.-+.
T Consensus 288 vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 288 VTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp BCHHHHHHHTCCTTCEEEECS
T ss_pred ecHHHHhhcccCCCcEEECCC
Confidence 78999998 89999999986
No 320
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.52 E-value=0.0013 Score=61.89 Aligned_cols=63 Identities=21% Similarity=0.329 Sum_probs=49.2
Q ss_pred CCEEEEEcC----ChHHHHHHHHhccC--CCEE-EEECCCCCCCC------Cc---ccccCHHHhhc--CCCEEEEeccC
Q 043239 148 GKRVGIVGL----GSIGSEVAKRLVPF--GCSI-AYTSRKKKPGV------SY---PFYANVSGLAA--DSDVLIVCCAL 209 (286)
Q Consensus 148 g~~vgIiG~----G~iG~~~A~~l~~~--g~~V-~~~~r~~~~~~------~~---~~~~~l~e~l~--~aDiV~~~lp~ 209 (286)
-.+|||||+ |.||...++.++.. +++| .+++++.++.. +. ..+.+++++++ +.|+|++|+|.
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 99 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQV 99 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCH
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCc
Confidence 358999999 99999999999886 6776 47888765321 22 25689999996 58999999984
Q ss_pred C
Q 043239 210 T 210 (286)
Q Consensus 210 ~ 210 (286)
.
T Consensus 100 ~ 100 (438)
T 3btv_A 100 A 100 (438)
T ss_dssp H
T ss_pred H
Confidence 4
No 321
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=96.48 E-value=0.01 Score=53.30 Aligned_cols=153 Identities=14% Similarity=0.164 Sum_probs=95.3
Q ss_pred HHHhccCCCccEEEEcCCCCCcCChhHHh-hc-CeEEEecCC-CCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCC
Q 043239 62 SDTLSLLPALEIVVGSTAGIDHVDLQECR-RR-GILVTNAGN-AFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHG 138 (286)
Q Consensus 62 ~~~l~~~~~Lk~i~~~~~G~d~id~~~~~-~~-gI~v~n~~~-~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~ 138 (286)
..+++++. -.|..+... +=.+..+. -. +|+|.|... ...-++ .+|+=++.+.++. |
T Consensus 92 arvls~~~--D~iviR~~~--~~~~~~la~~~~~vPVINag~G~~~HPt--QaLaDl~Ti~e~~---------g------ 150 (310)
T 3csu_A 92 ISVISTYV--DAIVMRHPQ--EGAARLATEFSGNVPVLNAGDGSNQHPT--QTLLDLFTIQETQ---------G------ 150 (310)
T ss_dssp HHHHTTTC--SEEEEEESS--TTHHHHHHHHCTTCCEEEEEETTSCCHH--HHHHHHHHHHHHH---------S------
T ss_pred HHHHHHhC--CEEEEECCC--hhHHHHHHHhcCCCCEEcCccCCCCCch--HHHHHHHHHHHHh---------C------
Confidence 34555553 445444332 22334333 44 699999753 333333 2333333333321 1
Q ss_pred CCCCcccCCCCEEEEEcC---ChHHHHHHHHhccC-CCEEEEECCCCCCCC----------C--cccccCHHHhhcCCCE
Q 043239 139 AYPLGSTLGGKRVGIVGL---GSIGSEVAKRLVPF-GCSIAYTSRKKKPGV----------S--YPFYANVSGLAADSDV 202 (286)
Q Consensus 139 ~~~~~~~l~g~~vgIiG~---G~iG~~~A~~l~~~-g~~V~~~~r~~~~~~----------~--~~~~~~l~e~l~~aDi 202 (286)
.+.|.+|+++|= |++..+++..+..+ |++|.+..+..-... + +....+++|+++++|+
T Consensus 151 ------~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDv 224 (310)
T 3csu_A 151 ------RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDI 224 (310)
T ss_dssp ------CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSE
T ss_pred ------CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCE
Confidence 378999999997 59999999999999 999998887543222 2 1234789999999999
Q ss_pred EEEeccCCh----h------hhhcccHHHHhcCCCCcEEEEcC-CCcccC
Q 043239 203 LIVCCALTE----E------THHMINKDVMTALGKEGVIINVG-RGALID 241 (286)
Q Consensus 203 V~~~lp~~~----~------t~~~i~~~~l~~mk~g~ilvn~s-rg~~vd 241 (286)
|.+-.--.+ + ....++.+.++.+|++++|.-+. ||.=|+
T Consensus 225 vyt~~~q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lPrg~EI~ 274 (310)
T 3csu_A 225 LYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIA 274 (310)
T ss_dssp EEECC-----------------CCBCGGGGTTCCTTCEEECCSCCSSSBC
T ss_pred EEECCccccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCCCCCCeec
Confidence 977532111 1 13556888899999999999886 544333
No 322
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.44 E-value=0.0033 Score=55.57 Aligned_cols=38 Identities=24% Similarity=0.400 Sum_probs=34.3
Q ss_pred cCCCCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCC
Q 043239 145 TLGGKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKK 182 (286)
Q Consensus 145 ~l~g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~ 182 (286)
++.|+++.|+| .|.+|+.+++.|...|++|++.+|+.+
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~ 154 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLD 154 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHH
Confidence 36789999999 999999999999999999999998753
No 323
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.43 E-value=0.0041 Score=51.97 Aligned_cols=89 Identities=10% Similarity=0.156 Sum_probs=57.7
Q ss_pred CEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cccc-ccCH----HHhhcCCCEEEEeccCC-----hh
Q 043239 149 KRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPF-YANV----SGLAADSDVLIVCCALT-----EE 212 (286)
Q Consensus 149 ~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~-~~~l----~e~l~~aDiV~~~lp~~-----~~ 212 (286)
|+|.|.|. |.||+.+++.|.+.|++|.+.+|+..+.. +... ..++ .+.+..+|+|+.+.... ..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~ 80 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGY 80 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcchhh
Confidence 47899997 99999999999999999999998754321 1110 1111 16788999998887542 11
Q ss_pred hhhcccHHHHhcCCC-CcEEEEcCCC
Q 043239 213 THHMINKDVMTALGK-EGVIINVGRG 237 (286)
Q Consensus 213 t~~~i~~~~l~~mk~-g~ilvn~srg 237 (286)
..-......++.|+. |..||.+|..
T Consensus 81 ~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 81 LHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp HHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 111112445666643 4677877653
No 324
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.43 E-value=0.0019 Score=58.03 Aligned_cols=109 Identities=17% Similarity=0.248 Sum_probs=65.2
Q ss_pred CEEEEEcCChHHHHHHHHhccCC--CEEEEECCCCCCCC--------------CcccccCHHHhhcCCCEEEEeccCChh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFG--CSIAYTSRKKKPGV--------------SYPFYANVSGLAADSDVLIVCCALTEE 212 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g--~~V~~~~r~~~~~~--------------~~~~~~~l~e~l~~aDiV~~~lp~~~~ 212 (286)
++|+|||.|.+|.+++..|...+ -++..+|...++.. ......+-.+.+++||+|+++.+....
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 58999999999999999998766 48999998753221 011111336779999999998764321
Q ss_pred -----------hhhcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHH--HHhCCeeEE
Q 043239 213 -----------THHMINK--DVMTALGKEGVIINVGRGALIDEKELVHF--LVRGSLVEL 257 (286)
Q Consensus 213 -----------t~~~i~~--~~l~~mk~g~ilvn~srg~~vd~~al~~a--l~~~~i~ga 257 (286)
+..++.. +.+....|.+++++++..-=+....+.+. +...++-|.
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 140 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQVAYALSGLPPGRVVGS 140 (310)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCGGGEEEC
T ss_pred CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCchHHHHHHHHHHcCCCHHHEEec
Confidence 0111100 11222368899999854433333333333 333355444
No 325
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=96.42 E-value=0.0044 Score=58.62 Aligned_cols=111 Identities=13% Similarity=0.110 Sum_probs=72.5
Q ss_pred CCEEEEEcCChH-HHHHHHHhcc----C-CCEEEEECCCC--CCCC---------------C--cccccCHHHhhcCCCE
Q 043239 148 GKRVGIVGLGSI-GSEVAKRLVP----F-GCSIAYTSRKK--KPGV---------------S--YPFYANVSGLAADSDV 202 (286)
Q Consensus 148 g~~vgIiG~G~i-G~~~A~~l~~----~-g~~V~~~~r~~--~~~~---------------~--~~~~~~l~e~l~~aDi 202 (286)
.++|+|||.|.. |.+++..|.. + +.+|..||+.. ++.. . .....++.+.+++||+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~ 86 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 86 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCE
Confidence 468999999999 8887666554 3 55899999987 4211 1 1123578889999999
Q ss_pred EEEeccCChh---hh----------------------------hccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 043239 203 LIVCCALTEE---TH----------------------------HMIN--KDVMTALGKEGVIINVGRGALIDEKELVHFL 249 (286)
Q Consensus 203 V~~~lp~~~~---t~----------------------------~~i~--~~~l~~mk~g~ilvn~srg~~vd~~al~~al 249 (286)
|++++|.... ++ .++. .+.+....|+++++|++..--+-+.++.+..
T Consensus 87 VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~~k~~ 166 (450)
T 1s6y_A 87 VTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYT 166 (450)
T ss_dssp EEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHC
T ss_pred EEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhC
Confidence 9999985321 11 0110 0122334689999999888766667776665
Q ss_pred HhCCeeEEE
Q 043239 250 VRGSLVELV 258 (286)
Q Consensus 250 ~~~~i~ga~ 258 (286)
...++-|.+
T Consensus 167 p~~rViG~c 175 (450)
T 1s6y_A 167 KQEKVVGLC 175 (450)
T ss_dssp CCCCEEECC
T ss_pred CCCCEEEeC
Confidence 343565553
No 326
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.41 E-value=0.0093 Score=53.04 Aligned_cols=84 Identities=14% Similarity=0.117 Sum_probs=54.9
Q ss_pred CEEEEEc-CChHHHHHHHHhcc-CCCEEE-EECCCCCCC-------------CCcccccCHHHhhcCCCEEEEeccCChh
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVP-FGCSIA-YTSRKKKPG-------------VSYPFYANVSGLAADSDVLIVCCALTEE 212 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~-~g~~V~-~~~r~~~~~-------------~~~~~~~~l~e~l~~aDiV~~~lp~~~~ 212 (286)
.+|+|+| +|+||+.+++.+.. -++++. +++++.... .++....++++++.++|+|+-+.+. ..
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~p-~a 100 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQP-QA 100 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSCH-HH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCCH-HH
Confidence 5899999 99999999998764 477865 567764321 1233467999999999999876531 11
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCC
Q 043239 213 THHMINKDVMTALGKEGVIINVGRG 237 (286)
Q Consensus 213 t~~~i~~~~l~~mk~g~ilvn~srg 237 (286)
+.. .....++.|.-+|-...|
T Consensus 101 ~~~----~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 101 SVL----YANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp HHH----HHHHHHHHTCEEEECCCC
T ss_pred HHH----HHHHHHHcCCCEEEECCC
Confidence 221 122223456556655556
No 327
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=96.40 E-value=0.047 Score=50.96 Aligned_cols=105 Identities=17% Similarity=0.271 Sum_probs=72.2
Q ss_pred cccCCCCEEEEEcCChHHHHHHHHhcc-CCCEEE-EECCCCC---C-----------------CCCc--ccccCHHHhh-
Q 043239 143 GSTLGGKRVGIVGLGSIGSEVAKRLVP-FGCSIA-YTSRKKK---P-----------------GVSY--PFYANVSGLA- 197 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~A~~l~~-~g~~V~-~~~r~~~---~-----------------~~~~--~~~~~l~e~l- 197 (286)
|.++.|++|.|.|+|++|+..|+.|.. .|.+|+ +.|.+.. + ..++ ....+.++++
T Consensus 204 g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~ 283 (415)
T 2tmg_A 204 GIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLE 283 (415)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTT
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhc
Confidence 457899999999999999999999998 999987 5554311 0 0000 0112445655
Q ss_pred cCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 198 ADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 198 ~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
..||+++-|.. .+.++.+....++ -.+++-.+.+.+. .+ -.+.|.++++.
T Consensus 284 ~~~DIliP~A~-----~n~i~~~~a~~l~-ak~V~EgAN~p~t-~~-a~~~l~~~Gi~ 333 (415)
T 2tmg_A 284 LDVDILVPAAL-----EGAIHAGNAERIK-AKAVVEGANGPTT-PE-ADEILSRRGIL 333 (415)
T ss_dssp CSCSEEEECSS-----TTSBCHHHHTTCC-CSEEECCSSSCBC-HH-HHHHHHHTTCE
T ss_pred CCCcEEEecCC-----cCccCcccHHHcC-CeEEEeCCCcccC-HH-HHHHHHHCCCE
Confidence 47999988753 4567888888884 4577777888864 33 34567777665
No 328
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.39 E-value=0.0016 Score=59.61 Aligned_cols=85 Identities=25% Similarity=0.323 Sum_probs=61.3
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC------CCccc---ccC---HHHhhcCCCEEEEeccCChhhh
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG------VSYPF---YAN---VSGLAADSDVLIVCCALTEETH 214 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~------~~~~~---~~~---l~e~l~~aDiV~~~lp~~~~t~ 214 (286)
.|++|.|+|.|.+|..+++.++.+|++|++.+++.++. .+... ..+ +.++....|+|+.++.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~-- 264 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP-- 264 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence 68899999999999999999999999999988776532 12211 112 33344568999998764321
Q ss_pred hcccHHHHhcCCCCcEEEEcCC
Q 043239 215 HMINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~ilvn~sr 236 (286)
-...++.|+++..+|+++.
T Consensus 265 ---~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 265 ---LLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ---SHHHHHHEEEEEEEEECCC
T ss_pred ---HHHHHHHHhcCCEEEEEcc
Confidence 2456777888888888864
No 329
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=96.38 E-value=0.013 Score=53.15 Aligned_cols=138 Identities=14% Similarity=0.210 Sum_probs=90.0
Q ss_pred HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCC--hHHHHHHHH
Q 043239 89 CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLG--SIGSEVAKR 166 (286)
Q Consensus 89 ~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G--~iG~~~A~~ 166 (286)
++..+|+|.|......-++ .+|+=++.+.++... .+ ...+.+.|.+|+++|=| ++..+++..
T Consensus 118 A~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~g~------~~--------~~~~~l~gl~va~vGD~~~~va~Sl~~~ 181 (328)
T 3grf_A 118 AQHASVPCINALDDFGHPL--QMVCDFMTIKEKFTA------AG--------EFSNGFKGIKFAYCGDSMNNVTYDLMRG 181 (328)
T ss_dssp HHHCSSCEEESSCSSCCHH--HHHHHHHHHHHHHHH------TT--------CCTTTGGGCCEEEESCCSSHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHhCC------cc--------ccccccCCcEEEEeCCCCcchHHHHHHH
Confidence 4456899999866433332 334444443333110 00 01235889999999975 899999999
Q ss_pred hccCCCEEEEECCCCCC--CC----------------C--cccccCHHHhhcCCCEEEEe----ccCCh---------hh
Q 043239 167 LVPFGCSIAYTSRKKKP--GV----------------S--YPFYANVSGLAADSDVLIVC----CALTE---------ET 213 (286)
Q Consensus 167 l~~~g~~V~~~~r~~~~--~~----------------~--~~~~~~l~e~l~~aDiV~~~----lp~~~---------~t 213 (286)
+..+|++|.+..+..-. .. + +....+++|+++++|+|.+- +...+ -.
T Consensus 182 ~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvytd~W~sm~iq~er~~~~~~~~~ 261 (328)
T 3grf_A 182 CALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVVYTDSWMSYHITKEQKEARLKVLT 261 (328)
T ss_dssp HHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSEEEECCCC--------CCTHHHHHG
T ss_pred HHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCEEEecCccccCCcHHHHHHHHHHhc
Confidence 99999999988775432 11 1 22457999999999999863 22011 02
Q ss_pred hhcccHHHHhcCCCCcEEEEcC---CCcccCH
Q 043239 214 HHMINKDVMTALGKEGVIINVG---RGALIDE 242 (286)
Q Consensus 214 ~~~i~~~~l~~mk~g~ilvn~s---rg~~vd~ 242 (286)
...++.+.++.+|++++|.-+. ||.=|+.
T Consensus 262 ~y~vt~~~l~~a~~~ai~mH~lPa~Rg~EI~~ 293 (328)
T 3grf_A 262 PFQVDDAVMAVTSKRSIFMNCLPATRGEEQTA 293 (328)
T ss_dssp GGCBCHHHHTTSCTTCEEEECSCCCTTTTBCH
T ss_pred CCCCCHHHHHhcCCCCEEECCCCCCCCCccCH
Confidence 3457899999999999999986 6654443
No 330
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.36 E-value=0.0019 Score=58.48 Aligned_cols=62 Identities=19% Similarity=0.310 Sum_probs=46.4
Q ss_pred CEEEEEcCChHHHH-HHHHhccC-CCEEE-EECCCCCCCC------Cc-ccccCHHHhhcC--CCEEEEeccCC
Q 043239 149 KRVGIVGLGSIGSE-VAKRLVPF-GCSIA-YTSRKKKPGV------SY-PFYANVSGLAAD--SDVLIVCCALT 210 (286)
Q Consensus 149 ~~vgIiG~G~iG~~-~A~~l~~~-g~~V~-~~~r~~~~~~------~~-~~~~~l~e~l~~--aDiV~~~lp~~ 210 (286)
.++||||+|.||+. .+..++.. +++|+ ++|++.++.. +. ..+.|+++++++ .|+|++|+|..
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~ 97 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTS 97 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGG
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCc
Confidence 48999999999986 46666654 67875 6788765432 22 347899999854 79999999854
No 331
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=96.36 E-value=0.0063 Score=54.29 Aligned_cols=66 Identities=15% Similarity=0.116 Sum_probs=49.2
Q ss_pred ccCCCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCC-------Ccc-------cccCHHHhhc--CCCEEEEe
Q 043239 144 STLGGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGV-------SYP-------FYANVSGLAA--DSDVLIVC 206 (286)
Q Consensus 144 ~~l~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-------~~~-------~~~~l~e~l~--~aDiV~~~ 206 (286)
..+.|++|.|.|. |.||+.+++.|...|++|++.+|+..... ... ...++.++++ .+|+|+.+
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~ 95 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHS 95 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEEC
Confidence 4688999999996 99999999999999999999988543211 111 1123556777 89999887
Q ss_pred ccC
Q 043239 207 CAL 209 (286)
Q Consensus 207 lp~ 209 (286)
...
T Consensus 96 A~~ 98 (330)
T 2pzm_A 96 AAA 98 (330)
T ss_dssp CCC
T ss_pred Ccc
Confidence 653
No 332
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.35 E-value=0.0053 Score=56.16 Aligned_cols=83 Identities=12% Similarity=0.193 Sum_probs=51.9
Q ss_pred CEEEEEc-CChHHHHHHHHhccCC-CEEEEECC--CCCCCC-----Cc----------c--cc--cCHHHhhc-CCCEEE
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVPFG-CSIAYTSR--KKKPGV-----SY----------P--FY--ANVSGLAA-DSDVLI 204 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~~g-~~V~~~~r--~~~~~~-----~~----------~--~~--~~l~e~l~-~aDiV~ 204 (286)
++|+|+| +|.+|+.+++.|.... ++|.+..+ +..... +. . .+ .+++++++ ++|+|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~ 88 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVF 88 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEE
Confidence 5899999 9999999999998764 57765532 211110 00 0 01 14455556 899999
Q ss_pred EeccCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 043239 205 VCCALTEETHHMINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 205 ~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~sr 236 (286)
.|+|... +.... ... ++.|..+||.+.
T Consensus 89 ~atp~~~-~~~~a-~~~---~~aG~~VId~s~ 115 (354)
T 1ys4_A 89 SALPSDL-AKKFE-PEF---AKEGKLIFSNAS 115 (354)
T ss_dssp ECCCHHH-HHHHH-HHH---HHTTCEEEECCS
T ss_pred ECCCchH-HHHHH-HHH---HHCCCEEEECCc
Confidence 9998432 22221 222 356888999874
No 333
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=96.34 E-value=0.012 Score=54.00 Aligned_cols=124 Identities=13% Similarity=0.152 Sum_probs=84.5
Q ss_pred HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCC--hHHHHHHHH
Q 043239 89 CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLG--SIGSEVAKR 166 (286)
Q Consensus 89 ~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G--~iG~~~A~~ 166 (286)
++-.+|+|.|..+...-++ .+|+=++.+..+ .| .+.|.+|+++|=+ ++..+++..
T Consensus 144 A~~s~vPVINa~~~~~HPt--QaLaDl~Ti~E~--------------------~G-~l~glkva~vGD~~nnva~Sl~~~ 200 (365)
T 4amu_A 144 VKYSGVPVWNGLTDDEHPT--QIIADFMTMKEK--------------------FG-NLKNKKIVFIGDYKNNVGVSTMIG 200 (365)
T ss_dssp HHHHCSCEEEEECSSCCHH--HHHHHHHHHHHH--------------------HS-SCTTCEEEEESSTTSHHHHHHHHH
T ss_pred HHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHH--------------------hC-CCCCCEEEEECCCCcchHHHHHHH
Confidence 4455899999765333332 333333333222 11 2789999999987 889999999
Q ss_pred hccCCCEEEEECCCCCCC--C--------------C--cccccCHHHhhcCCCEEEEe----ccCChh---------hhh
Q 043239 167 LVPFGCSIAYTSRKKKPG--V--------------S--YPFYANVSGLAADSDVLIVC----CALTEE---------THH 215 (286)
Q Consensus 167 l~~~g~~V~~~~r~~~~~--~--------------~--~~~~~~l~e~l~~aDiV~~~----lp~~~~---------t~~ 215 (286)
+..+|++|.+..+..-.. . + +....+++|+++++|+|.+- +....+ ...
T Consensus 201 ~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVytd~W~smg~~~~~~~er~~~~~~y 280 (365)
T 4amu_A 201 AAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYTDVWVSLGEPFELFDKRIGELKNF 280 (365)
T ss_dssp HHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEECCSCCTTCCHHHHHHHHHHHTTC
T ss_pred HHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEecccccCCchhhhHHHHHHHhccc
Confidence 999999999888743222 1 1 22357999999999999873 121111 124
Q ss_pred cccHHHHhcCCCCcEEEEcC
Q 043239 216 MINKDVMTALGKEGVIINVG 235 (286)
Q Consensus 216 ~i~~~~l~~mk~g~ilvn~s 235 (286)
-++.+.++.+|++++|.-+.
T Consensus 281 ~vt~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 281 QVDMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp CBCHHHHHHSCTTCEEEECS
T ss_pred ccCHHHHHhcCCCcEEECCC
Confidence 57899999999999999886
No 334
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=96.34 E-value=0.0022 Score=57.61 Aligned_cols=90 Identities=17% Similarity=0.270 Sum_probs=58.3
Q ss_pred EEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC---------------C--cccccCHHHhhcCCCEEEEeccCCh
Q 043239 150 RVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV---------------S--YPFYANVSGLAADSDVLIVCCALTE 211 (286)
Q Consensus 150 ~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~---------------~--~~~~~~l~e~l~~aDiV~~~lp~~~ 211 (286)
+|+|||.|.||..++..+...|+ +|..+|+..++.. . .....+. +.+++||+|+++.+...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~ 79 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGR 79 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCC
Confidence 58999999999999999876676 6999998765322 1 1111454 67899999999965432
Q ss_pred h-----------hhhcccHHH---HhcCCCCcEEEEcCCCcccCHH
Q 043239 212 E-----------THHMINKDV---MTALGKEGVIINVGRGALIDEK 243 (286)
Q Consensus 212 ~-----------t~~~i~~~~---l~~mk~g~ilvn~srg~~vd~~ 243 (286)
. +..++ ++. +....|++++|+++. ++|.-
T Consensus 80 k~G~~r~dl~~~n~~i~-~~i~~~i~~~~p~a~iiv~tN--Pv~~~ 122 (308)
T 2d4a_B 80 KPGMTREQLLEANANTM-ADLAEKIKAYAKDAIVVITTN--PVDAM 122 (308)
T ss_dssp CSSCCTHHHHHHHHHHH-HHHHHHHHHHCTTCEEEECCS--SHHHH
T ss_pred CCCCcHHHHHHHHHHHH-HHHHHHHHHHCCCeEEEEeCC--chHHH
Confidence 1 11111 122 222258899999855 44433
No 335
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=96.31 E-value=0.0067 Score=51.34 Aligned_cols=65 Identities=22% Similarity=0.287 Sum_probs=50.3
Q ss_pred CCCCEEEEEc-CChHHHHHHHHhccCCC--EEEEECCCCCCCCC------------cccccCHHHhhcCCCEEEEeccCC
Q 043239 146 LGGKRVGIVG-LGSIGSEVAKRLVPFGC--SIAYTSRKKKPGVS------------YPFYANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 146 l~g~~vgIiG-~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~~------------~~~~~~l~e~l~~aDiV~~~lp~~ 210 (286)
+.++++.|.| .|.||+.+++.|...|+ +|++.+|+...... .....+++++++..|+|+.+....
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 4578999999 69999999999999999 99999987754321 111245667788999999887654
No 336
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=96.31 E-value=0.018 Score=54.25 Aligned_cols=121 Identities=15% Similarity=0.228 Sum_probs=91.8
Q ss_pred CeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCChHHHHHHHHhccCCC
Q 043239 93 GILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGC 172 (286)
Q Consensus 93 gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~ 172 (286)
.|++.|.-- .-+|=-+++.+++.+|- .++++...+|.|.|.|..|..+|+.+...|.
T Consensus 187 ~ipvFnDD~---qGTA~V~lAgllnAlki--------------------~gk~l~d~riV~~GAGaAGigia~ll~~~G~ 243 (487)
T 3nv9_A 187 DIPVWHDDQ---QGTASVTLAGLLNALKL--------------------VKKDIHECRMVFIGAGSSNTTCLRLIVTAGA 243 (487)
T ss_dssp SSCEEETTT---HHHHHHHHHHHHHHHHH--------------------HTCCGGGCCEEEECCSHHHHHHHHHHHHTTC
T ss_pred cCCcccccc---chHHHHHHHHHHHHHHH--------------------hCCChhhcEEEEECCCHHHHHHHHHHHHcCC
Confidence 799998652 35677788888887775 3456889999999999999999999999998
Q ss_pred ---EEEEECCCC----CCCC-----------------CcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhcCCCC
Q 043239 173 ---SIAYTSRKK----KPGV-----------------SYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKE 228 (286)
Q Consensus 173 ---~V~~~~r~~----~~~~-----------------~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g 228 (286)
+|+.+|+.. .... ......+|.|+++.+|+++-+ ... ..+.+.++++..|.+.
T Consensus 244 ~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~-S~~--~pg~ft~e~V~~Ma~~ 320 (487)
T 3nv9_A 244 DPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISL-STP--GPGVVKAEWIKSMGEK 320 (487)
T ss_dssp CGGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEEC-CCS--SCCCCCHHHHHTSCSS
T ss_pred CcccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCEEEEe-ccc--CCCCCCHHHHHhhcCC
Confidence 798888752 1100 000235799999999977654 211 1478999999999999
Q ss_pred cEEEEcCCCcc
Q 043239 229 GVIINVGRGAL 239 (286)
Q Consensus 229 ~ilvn~srg~~ 239 (286)
++|.-+|+...
T Consensus 321 PIIFaLSNPtp 331 (487)
T 3nv9_A 321 PIVFCCANPVP 331 (487)
T ss_dssp CEEEECCSSSC
T ss_pred CEEEECCCCCc
Confidence 99999987654
No 337
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.31 E-value=0.0077 Score=54.08 Aligned_cols=35 Identities=29% Similarity=0.175 Sum_probs=30.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCC
Q 043239 147 GGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKK 181 (286)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~ 181 (286)
..++|.|.|. |.+|+.+++.|...|++|.+.+|+.
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3578999997 9999999999999999999999876
No 338
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.30 E-value=0.0047 Score=55.28 Aligned_cols=67 Identities=15% Similarity=0.085 Sum_probs=46.7
Q ss_pred cccCCCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCC------CcccccCHHHhhcCCCEEEEeccC
Q 043239 143 GSTLGGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGV------SYPFYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 143 ~~~l~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~~~~~~~l~e~l~~aDiV~~~lp~ 209 (286)
..+..+++|.|.|. |.||+.+++.|...|++|++.+|+..... ......++.++++.+|+|+.+...
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF 87 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence 45688999999997 99999999999999999999998765411 111234566788999999877543
No 339
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=96.29 E-value=0.0061 Score=56.86 Aligned_cols=102 Identities=18% Similarity=0.156 Sum_probs=63.0
Q ss_pred CCEEEEEcCCh---HHHHHHHHhccCC-CEEE--EECCCCCCCC------Cc---ccccCHHHhhcC-------CCEEEE
Q 043239 148 GKRVGIVGLGS---IGSEVAKRLVPFG-CSIA--YTSRKKKPGV------SY---PFYANVSGLAAD-------SDVLIV 205 (286)
Q Consensus 148 g~~vgIiG~G~---iG~~~A~~l~~~g-~~V~--~~~r~~~~~~------~~---~~~~~l~e~l~~-------aDiV~~ 205 (286)
-.+|||||+|. ||+..+..++..+ ++++ +++++.++.. +. ..+.++++++++ .|+|++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I 116 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAI 116 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEE
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEE
Confidence 35899999999 9999988877665 5765 5688765432 33 457899999876 899999
Q ss_pred eccCChhhhhcccHHHHhcCCCC-cEEEEcC-CCcccCHHHHHHHHHhCCe
Q 043239 206 CCALTEETHHMINKDVMTALGKE-GVIINVG-RGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 206 ~lp~~~~t~~~i~~~~l~~mk~g-~ilvn~s-rg~~vd~~al~~al~~~~i 254 (286)
++|...... -....++.| .+|+.-- .-.+-+.+.|.++.++.++
T Consensus 117 ~tp~~~H~~-----~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~ 162 (417)
T 3v5n_A 117 VTPNHVHYA-----AAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDA 162 (417)
T ss_dssp CSCTTSHHH-----HHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSS
T ss_pred CCCcHHHHH-----HHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCC
Confidence 999653322 122223344 2444321 2233445555555555443
No 340
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.29 E-value=0.017 Score=54.27 Aligned_cols=87 Identities=14% Similarity=0.220 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCC----------hHHHHHHHHhccC-CCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhh
Q 043239 146 LGGKRVGIVGLG----------SIGSEVAKRLVPF-GCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETH 214 (286)
Q Consensus 146 l~g~~vgIiG~G----------~iG~~~A~~l~~~-g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~ 214 (286)
+.|++|+|+|+. .-...+++.|... |.+|.+||+..... ....++++.++++|.|++++. .++-+
T Consensus 313 ~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~---~~~~~~~~~~~~ad~vvi~t~-~~~f~ 388 (431)
T 3ojo_A 313 LSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD---FVEHDMSHAVKDASLVLILSD-HSEFK 388 (431)
T ss_dssp SSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT---TBCSTTHHHHTTCSEEEECSC-CGGGT
T ss_pred cCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc---cccCCHHHHHhCCCEEEEecC-CHHHh
Confidence 589999999975 3578999999999 99999999876543 235678999999999999875 33333
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcc
Q 043239 215 HMINKDVMTALGKEGVIINVGRGAL 239 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~ilvn~srg~~ 239 (286)
.+ +-+.++.|+ +.+++|. |+-+
T Consensus 389 ~~-d~~~~~~~~-~~~i~D~-r~~~ 410 (431)
T 3ojo_A 389 NL-SDSHFDKMK-HKVIFDT-KNVV 410 (431)
T ss_dssp SC-CGGGGTTCS-SCEEEES-SCCC
T ss_pred cc-CHHHHHhCC-CCEEEEC-CCCC
Confidence 32 333346676 6789996 5543
No 341
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.29 E-value=0.0016 Score=60.64 Aligned_cols=61 Identities=16% Similarity=0.223 Sum_probs=46.3
Q ss_pred CEEEEEcCChHHHHHHHHhccCC---CEEEEECCCCCCCC------------Cc-------ccccCHHHhhcC--CCEEE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFG---CSIAYTSRKKKPGV------------SY-------PFYANVSGLAAD--SDVLI 204 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g---~~V~~~~r~~~~~~------------~~-------~~~~~l~e~l~~--aDiV~ 204 (286)
++|+|+|.|.||+.+++.|...| .+|.+.+|+.++.. .. ....++++++++ +|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 58999999999999999999887 38999998765321 01 112456677877 89999
Q ss_pred EeccC
Q 043239 205 VCCAL 209 (286)
Q Consensus 205 ~~lp~ 209 (286)
.+.|.
T Consensus 82 n~ag~ 86 (405)
T 4ina_A 82 NIALP 86 (405)
T ss_dssp ECSCG
T ss_pred ECCCc
Confidence 99874
No 342
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=96.28 E-value=0.082 Score=47.67 Aligned_cols=139 Identities=8% Similarity=-0.017 Sum_probs=92.1
Q ss_pred CcCChhHH-hhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEE-----Ec
Q 043239 82 DHVDLQEC-RRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGI-----VG 155 (286)
Q Consensus 82 d~id~~~~-~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgI-----iG 155 (286)
.+-.+..+ +-.+|+|.|..+...-++ .+|+=++.+.++. |. ..+. .+|++ +|
T Consensus 123 ~~~~~~~lA~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~---------g~----------~~l~-l~ia~a~~~~vG 180 (324)
T 1js1_X 123 NEVIINQFIQHSGRPVFSMEAATRHPL--QSFADLITIEEYK---------KT----------ARPK-VVMTWAPHPRPL 180 (324)
T ss_dssp HTHHHHHHHHHSSSCEEESSCSSCCHH--HHHHHHHHHHHHC---------SS----------SSCE-EEEECCCCSSCC
T ss_pred cchHHHHHHhhCCCCEEECCCCCCCcH--HHHHHHHHHHHHc---------CC----------CCee-EEEEEEcccccC
Confidence 33334433 445799999766333333 3444444433331 10 1366 89999 99
Q ss_pred CChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEecc-C-Ch---------hhhhcccH
Q 043239 156 LGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCA-L-TE---------ETHHMINK 219 (286)
Q Consensus 156 ~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp-~-~~---------~t~~~i~~ 219 (286)
=+++..+++..+..+|++|.+..+..-... .+....+++|+++++|+|.+-.= . .+ .....+++
T Consensus 181 D~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~w~s~g~~~~~~~~~r~~~y~vt~ 260 (324)
T 1js1_X 181 PQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNWAAYTGDNYGQILSTDRNWTVGD 260 (324)
T ss_dssp CSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSEEEECCCCCCSTTCTTCCCCCCTTSSBCH
T ss_pred CcchHHHHHHHHHHCCCEEEEeCCcccCCChhhccceEEECCHHHHhCCCCEEEecCcccCCCccccchHHHhcCcccCH
Confidence 999999999999999999998887554332 23456899999999999987321 0 01 12356788
Q ss_pred HHHhcCCCCcEEEEcC---CCcccCHH
Q 043239 220 DVMTALGKEGVIINVG---RGALIDEK 243 (286)
Q Consensus 220 ~~l~~mk~g~ilvn~s---rg~~vd~~ 243 (286)
+.++.+| +++|.-+. ||.=|+.+
T Consensus 261 e~l~~a~-~ai~MHcLP~~Rg~EI~~e 286 (324)
T 1js1_X 261 RQMAVTN-NAYFMHCLPVRRNMIVTDD 286 (324)
T ss_dssp HHHTTSS-SCEEECCSCCCBTTTBCHH
T ss_pred HHHHhcC-CcEEECCCCCCCCcccCHH
Confidence 9999999 99999886 46544443
No 343
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.23 E-value=0.011 Score=51.79 Aligned_cols=61 Identities=23% Similarity=0.283 Sum_probs=44.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCC--------------CCcc-------cccCHHHhhcCCCEEEE
Q 043239 148 GKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPG--------------VSYP-------FYANVSGLAADSDVLIV 205 (286)
Q Consensus 148 g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~--------------~~~~-------~~~~l~e~l~~aDiV~~ 205 (286)
.++|.|.|. |.+|+.+++.|.+.|++|.+.+|+.... .+.. ...++.++++.+|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 468999995 9999999999999999999999875321 1111 12345567778888877
Q ss_pred ecc
Q 043239 206 CCA 208 (286)
Q Consensus 206 ~lp 208 (286)
+.+
T Consensus 84 ~a~ 86 (308)
T 1qyc_A 84 TVG 86 (308)
T ss_dssp CCC
T ss_pred CCc
Confidence 664
No 344
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=96.22 E-value=0.013 Score=53.51 Aligned_cols=148 Identities=15% Similarity=0.104 Sum_probs=95.4
Q ss_pred HHHhccCCCccEEEEcCCCCCcCChhH-HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCC
Q 043239 62 SDTLSLLPALEIVVGSTAGIDHVDLQE-CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAY 140 (286)
Q Consensus 62 ~~~l~~~~~Lk~i~~~~~G~d~id~~~-~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~ 140 (286)
..++.++. -.|..+..+ +=.+.. ++-.+|+|.|..+...-++ .+|+=++.+.++. |
T Consensus 116 arvLs~~~--D~IviR~~~--~~~~~~lA~~s~vPVINa~~~~~HPt--QaLaDl~Ti~E~~---------g-------- 172 (359)
T 2w37_A 116 AKVLGSMF--DGIEFRGFK--QSDAEILARDSGVPVWNGLTDEWHPT--QMLADFMTVKENF---------G-------- 172 (359)
T ss_dssp HHHHHHHC--SEEEEESSC--HHHHHHHHHHSSSCEEEEECSSCCHH--HHHHHHHHHHHHH---------S--------
T ss_pred HHHHHHhc--CEEEEecCC--hHHHHHHHHhCCCCEEcCCCCCCCcc--HHHHHHHHHHHHh---------C--------
Confidence 34444443 445555432 222333 3445799999765333332 3444444433321 1
Q ss_pred CCcccCCCCEEEEEcCC--hHHHHHHHHhccCCCEEEEECCCCCCCC--------------C--cccccCHHHhhcCCCE
Q 043239 141 PLGSTLGGKRVGIVGLG--SIGSEVAKRLVPFGCSIAYTSRKKKPGV--------------S--YPFYANVSGLAADSDV 202 (286)
Q Consensus 141 ~~~~~l~g~~vgIiG~G--~iG~~~A~~l~~~g~~V~~~~r~~~~~~--------------~--~~~~~~l~e~l~~aDi 202 (286)
.+.|.+|+++|=| ++..+++..+..+|++|.+..+..-... + +....+++|+++++|+
T Consensus 173 ----~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDv 248 (359)
T 2w37_A 173 ----KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNV 248 (359)
T ss_dssp ----CCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSE
T ss_pred ----CcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCE
Confidence 3789999999985 9999999999999999998887543221 1 2236789999999999
Q ss_pred EEEecc----CC-hh------hhhcccHHHHhcCC---CCcEEEEcCC
Q 043239 203 LIVCCA----LT-EE------THHMINKDVMTALG---KEGVIINVGR 236 (286)
Q Consensus 203 V~~~lp----~~-~~------t~~~i~~~~l~~mk---~g~ilvn~sr 236 (286)
|.+-.= .. .. ....++.+.++.+| ++++|.-+.-
T Consensus 249 vytd~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcLP 296 (359)
T 2w37_A 249 VYTDVWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCLP 296 (359)
T ss_dssp EEECCSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECSC
T ss_pred EEEcccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCCC
Confidence 987332 00 11 23557889999999 9999999853
No 345
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=96.21 E-value=0.0031 Score=57.32 Aligned_cols=92 Identities=14% Similarity=0.118 Sum_probs=59.1
Q ss_pred CCCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCC--------CCc--------ccccCHHHhhcCCCEEEEeccC
Q 043239 147 GGKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPG--------VSY--------PFYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~--------~~~--------~~~~~l~e~l~~aDiV~~~lp~ 209 (286)
.+++|.|.| .|.+|+.+++.|...|++|.+.+|+.... .+. ....++.++++.+|+|+.+...
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 367899999 59999999999999999999988876542 111 1122356778999999876643
Q ss_pred ChhhhhcccHHHHhcCCC-C--cEEEEcCCCc
Q 043239 210 TEETHHMINKDVMTALGK-E--GVIINVGRGA 238 (286)
Q Consensus 210 ~~~t~~~i~~~~l~~mk~-g--~ilvn~srg~ 238 (286)
.........+..++.++. | ..||.+|...
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 211111222344444422 3 3677877654
No 346
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.20 E-value=0.0053 Score=55.74 Aligned_cols=99 Identities=17% Similarity=0.205 Sum_probs=61.7
Q ss_pred CEEEEEcCChHHHHHHHHhccC---------CCEE-EEECCCCCCCCCc---ccccCHHHhhcCCCEEEEeccCChhhhh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF---------GCSI-AYTSRKKKPGVSY---PFYANVSGLAADSDVLIVCCALTEETHH 215 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~---------g~~V-~~~~r~~~~~~~~---~~~~~l~e~l~~aDiV~~~lp~~~~t~~ 215 (286)
.+|||+|+|.||+.+++.+... +++| .+++++..+..+. ....++++++ +.|+|+.|+|.......
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~~~~~~~d~~~ll-~iDvVve~t~~~~~a~~ 82 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIPQELLRAEPFDLL-EADLVVEAMGGVEAPLR 82 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSCGGGEESSCCCCT-TCSEEEECCCCSHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccCcccccCCHHHHh-CCCEEEECCCCcHHHHH
Confidence 4799999999999999988765 3565 4677776544322 2356788888 99999999885432221
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHhC
Q 043239 216 MINKDVMTALGKEGVIINVGRGAL-IDEKELVHFLVRG 252 (286)
Q Consensus 216 ~i~~~~l~~mk~g~ilvn~srg~~-vd~~al~~al~~~ 252 (286)
. ....++.|.-+|...-..+ ...+.|.++.+++
T Consensus 83 ~----~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 83 L----VLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp H----HHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred H----HHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 2 1223445544444322212 3556666666655
No 347
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.19 E-value=0.005 Score=55.73 Aligned_cols=86 Identities=24% Similarity=0.371 Sum_probs=60.3
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Ccc-cccCHHHhhcCCCEEEEeccCChhhhhcccHH
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYP-FYANVSGLAADSDVLIVCCALTEETHHMINKD 220 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~-~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~ 220 (286)
.|.+|.|+|.|.+|...++.++.+|++|++.+++.++.. +.. ...+.+++.+..|+|+-++.... .-..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~-----~~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHY-----DLKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCC-----CHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHH-----HHHH
Confidence 478999999999999999999999999999998876532 221 11233333346889988876331 1235
Q ss_pred HHhcCCCCcEEEEcCCC
Q 043239 221 VMTALGKEGVIINVGRG 237 (286)
Q Consensus 221 ~l~~mk~g~ilvn~srg 237 (286)
.++.++++..++.++..
T Consensus 251 ~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 251 YLKLLTYNGDLALVGLP 267 (348)
T ss_dssp HHTTEEEEEEEEECCCC
T ss_pred HHHHHhcCCEEEEECCC
Confidence 56677777777777543
No 348
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.18 E-value=0.002 Score=61.13 Aligned_cols=63 Identities=19% Similarity=0.256 Sum_probs=47.4
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------Ccc-------cccCHHHh-hcCCCEEEEeccC
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------SYP-------FYANVSGL-AADSDVLIVCCAL 209 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~~~-------~~~~l~e~-l~~aDiV~~~lp~ 209 (286)
..|+|.|+|+|.+|+.+|+.|...|++|++.+++++... +.. ....|+++ +++||+++.+++.
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~ 78 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNT 78 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSC
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCC
Confidence 357999999999999999999999999999998765421 111 12234454 6889998877654
No 349
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.18 E-value=0.0016 Score=57.54 Aligned_cols=41 Identities=29% Similarity=0.536 Sum_probs=36.7
Q ss_pred CCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCC
Q 043239 141 PLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKK 181 (286)
Q Consensus 141 ~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~ 181 (286)
+...++.|++|.|+|.|.+|...++.|...|++|+++++..
T Consensus 6 pl~~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 6 QLAHQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp EEEECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred eEEEEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 44567899999999999999999999999999999988654
No 350
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.16 E-value=0.0099 Score=52.11 Aligned_cols=34 Identities=24% Similarity=0.326 Sum_probs=30.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCC
Q 043239 148 GKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKK 181 (286)
Q Consensus 148 g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~ 181 (286)
+++|.|.|. |.+|+.+++.|...|++|.+.+|+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 578999995 9999999999999999999988875
No 351
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.16 E-value=0.023 Score=53.10 Aligned_cols=105 Identities=17% Similarity=0.252 Sum_probs=73.2
Q ss_pred cccCCCCEEEEEcCChHHHHHHHHhccCCCEEE-EECCCCC----------------CCCC-c----ccccCHHHhh-cC
Q 043239 143 GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIA-YTSRKKK----------------PGVS-Y----PFYANVSGLA-AD 199 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~-~~~r~~~----------------~~~~-~----~~~~~l~e~l-~~ 199 (286)
+.++.|++|.|-|+|++|+..|+.|...|.+|+ +.|.+.. ...+ . ....+.++++ ..
T Consensus 216 g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~~ 295 (424)
T 3k92_A 216 GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEKD 295 (424)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHSC
T ss_pred CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceecc
Confidence 456899999999999999999999999999975 5565421 0001 0 1122445544 46
Q ss_pred CCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 200 SDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 200 aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
||+++=|. +.+.|+.+....++ -.+++-.+.+.+. . +..+.|.+++|.
T Consensus 296 ~DIliPcA-----~~n~I~~~~a~~l~-ak~V~EgAN~p~t-~-eA~~iL~~rGI~ 343 (424)
T 3k92_A 296 CDILVPAA-----ISNQITAKNAHNIQ-ASIVVERANGPTT-I-DATKILNERGVL 343 (424)
T ss_dssp CSEEEECS-----CSSCBCTTTGGGCC-CSEEECCSSSCBC-H-HHHHHHHHTTCE
T ss_pred ccEEeecC-----cccccChhhHhhcC-ceEEEcCCCCCCC-H-HHHHHHHHCCCE
Confidence 99997764 35678888877774 4577888888864 3 345778887774
No 352
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=96.15 E-value=0.0085 Score=53.17 Aligned_cols=64 Identities=16% Similarity=0.122 Sum_probs=47.8
Q ss_pred cCCCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCC------------C--------CcccccCHHHhhcCCCEE
Q 043239 145 TLGGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPG------------V--------SYPFYANVSGLAADSDVL 203 (286)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~------------~--------~~~~~~~l~e~l~~aDiV 203 (286)
.+.+++|.|.|. |.||+.+++.|...|++|++.+|+.... . ......+++++++.+|+|
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 467899999997 9999999999999999999988864210 1 111123456677789999
Q ss_pred EEecc
Q 043239 204 IVCCA 208 (286)
Q Consensus 204 ~~~lp 208 (286)
+.+..
T Consensus 88 ih~A~ 92 (342)
T 1y1p_A 88 AHIAS 92 (342)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 87754
No 353
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.15 E-value=0.0023 Score=59.01 Aligned_cols=62 Identities=18% Similarity=0.273 Sum_probs=48.3
Q ss_pred CCEEEEEcCChHHHHHHHHhccC--CCEEE-EECCCCCCCC------CcccccCHHHhhcCCCEEEEeccCC
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPF--GCSIA-YTSRKKKPGV------SYPFYANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~--g~~V~-~~~r~~~~~~------~~~~~~~l~e~l~~aDiV~~~lp~~ 210 (286)
..+|||||+| +|+.-++.++.. +++++ +++++.++.. ++..+.|+++++++.|++++++|..
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~ 77 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRST 77 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCc
Confidence 4589999999 799888888765 57765 6788776432 4556789999999999999999854
No 354
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.14 E-value=0.0019 Score=59.95 Aligned_cols=63 Identities=14% Similarity=0.172 Sum_probs=47.2
Q ss_pred CEEEEEcCChHHHHHHHHhccC---------CCEEE-EECCCCCCCC------Cc-ccccCHHHhhc--CCCEEEEeccC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF---------GCSIA-YTSRKKKPGV------SY-PFYANVSGLAA--DSDVLIVCCAL 209 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~---------g~~V~-~~~r~~~~~~------~~-~~~~~l~e~l~--~aDiV~~~lp~ 209 (286)
.+|||||+|.||+..++.++.. +.+|+ ++|++.++.. +. ..+.+++++++ +.|+|++++|.
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 5899999999999988887653 34655 6788765432 22 35689999996 57999999985
Q ss_pred Ch
Q 043239 210 TE 211 (286)
Q Consensus 210 ~~ 211 (286)
..
T Consensus 107 ~~ 108 (412)
T 4gqa_A 107 HL 108 (412)
T ss_dssp GG
T ss_pred HH
Confidence 43
No 355
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.13 E-value=0.0066 Score=51.61 Aligned_cols=63 Identities=17% Similarity=0.121 Sum_probs=45.5
Q ss_pred CCEEEEEcCChHHHHHHHHh--ccCCCEEE-EECCCCC-CC-----CCcc--cccCHHHhhcC--CCEEEEeccCC
Q 043239 148 GKRVGIVGLGSIGSEVAKRL--VPFGCSIA-YTSRKKK-PG-----VSYP--FYANVSGLAAD--SDVLIVCCALT 210 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l--~~~g~~V~-~~~r~~~-~~-----~~~~--~~~~l~e~l~~--aDiV~~~lp~~ 210 (286)
..+++|+|+|++|+.+++.+ ...|+++. ++|..+. .. .+.. ...++++++++ .|++++++|..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~ 159 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPST 159 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCch
Confidence 46899999999999999984 45678865 5676665 32 1222 24678888764 89999999954
No 356
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.12 E-value=0.011 Score=53.71 Aligned_cols=62 Identities=19% Similarity=0.313 Sum_probs=41.9
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEEE-EECCCCCCCC------Ccccc-----------------cCHHHhhcCCCEE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSIA-YTSRKKKPGV------SYPFY-----------------ANVSGLAADSDVL 203 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V~-~~~r~~~~~~------~~~~~-----------------~~l~e~l~~aDiV 203 (286)
.+|||+|+|.||+.+++.+... ++++. +.+++..... ++..+ .++++++.++|+|
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV 81 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEE
Confidence 3899999999999999999865 45765 5565533210 11111 1344556689999
Q ss_pred EEeccCC
Q 043239 204 IVCCALT 210 (286)
Q Consensus 204 ~~~lp~~ 210 (286)
+.|+|..
T Consensus 82 ~~aTp~~ 88 (340)
T 1b7g_O 82 VDTTPNG 88 (340)
T ss_dssp EECCSTT
T ss_pred EECCCCc
Confidence 9999854
No 357
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.11 E-value=0.0052 Score=55.74 Aligned_cols=63 Identities=19% Similarity=0.251 Sum_probs=45.6
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEEE-EECCCCCCCC------Cc------------------ccccCHHHhhcCCCE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSIA-YTSRKKKPGV------SY------------------PFYANVSGLAADSDV 202 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V~-~~~r~~~~~~------~~------------------~~~~~l~e~l~~aDi 202 (286)
.+|||+|+|.||+.+++.+... ++++. +.+++.+... ++ ....+.++++.++|+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDv 82 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCE
Confidence 4899999999999999999865 45765 4566533211 10 223578888889999
Q ss_pred EEEeccCCh
Q 043239 203 LIVCCALTE 211 (286)
Q Consensus 203 V~~~lp~~~ 211 (286)
|+.|+|...
T Consensus 83 V~~aTp~~~ 91 (334)
T 2czc_A 83 IVDATPGGI 91 (334)
T ss_dssp EEECCSTTH
T ss_pred EEECCCccc
Confidence 999998553
No 358
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.09 E-value=0.022 Score=53.33 Aligned_cols=105 Identities=10% Similarity=0.213 Sum_probs=65.4
Q ss_pred cccCCCCEEEEEcCChHHHHHHHHhccCCCEEE-EECCCCC----C---CCCc--------------------ccccCHH
Q 043239 143 GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIA-YTSRKKK----P---GVSY--------------------PFYANVS 194 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~-~~~r~~~----~---~~~~--------------------~~~~~l~ 194 (286)
|.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|.+.+ . ..+. ....+.+
T Consensus 207 g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~ 286 (421)
T 2yfq_A 207 GIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDE 286 (421)
T ss_dssp TCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCcc
Confidence 446899999999999999999999999999988 4555521 0 0000 0011123
Q ss_pred Hhh-cCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 195 GLA-ADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 195 e~l-~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
+++ ..||+++-|. +.+.|+.+....++ ..+++-.+.+.+. .+ -.+.|.+++|.
T Consensus 287 ~~~~~~~DIliP~A-----~~n~i~~~~A~~l~-ak~VvEgAN~P~t-~e-a~~il~~~GI~ 340 (421)
T 2yfq_A 287 EFWTKEYDIIVPAA-----LENVITGERAKTIN-AKLVCEAANGPTT-PE-GDKVLTERGIN 340 (421)
T ss_dssp --------CEEECS-----CSSCSCHHHHTTCC-CSEEECCSSSCSC-HH-HHHHHHHHTCE
T ss_pred chhcCCccEEEEcC-----CcCcCCcccHHHcC-CeEEEeCCccccC-HH-HHHHHHHCCCE
Confidence 333 3689888775 35678888888883 5678888888864 33 33556666654
No 359
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=96.09 E-value=0.02 Score=51.38 Aligned_cols=94 Identities=14% Similarity=0.222 Sum_probs=60.1
Q ss_pred CEEEEEcC-ChHHHHHHHHhccCC--CEEEEECCCCCCC------C---C--ccc---ccCHHHhhcCCCEEEEeccCCh
Q 043239 149 KRVGIVGL-GSIGSEVAKRLVPFG--CSIAYTSRKKKPG------V---S--YPF---YANVSGLAADSDVLIVCCALTE 211 (286)
Q Consensus 149 ~~vgIiG~-G~iG~~~A~~l~~~g--~~V~~~~r~~~~~------~---~--~~~---~~~l~e~l~~aDiV~~~lp~~~ 211 (286)
++|+|+|. |.+|..++..|...| .+|..+|+..... . . ... ..++++.+++||+|+++.....
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~ 80 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR 80 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence 48999998 999999999998877 5899998865110 0 1 111 1367788999999999864321
Q ss_pred h---hh-hc------ccHHH---HhcCCCCcEEEEcCCCcccCHHH
Q 043239 212 E---TH-HM------INKDV---MTALGKEGVIINVGRGALIDEKE 244 (286)
Q Consensus 212 ~---t~-~~------i~~~~---l~~mk~g~ilvn~srg~~vd~~a 244 (286)
. ++ .+ +-++. +....|.++++++ ..++|.-.
T Consensus 81 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~--sNPv~~~~ 124 (314)
T 1mld_A 81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII--SNPVNSTI 124 (314)
T ss_dssp CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC--SSCHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE--CCCcchhH
Confidence 1 10 01 01111 2222578899997 44566554
No 360
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.07 E-value=0.0042 Score=58.58 Aligned_cols=110 Identities=15% Similarity=0.166 Sum_probs=70.3
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC---------CCcccc--cCHHHhhcC-CCEEEEe--ccCC
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG---------VSYPFY--ANVSGLAAD-SDVLIVC--CALT 210 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~---------~~~~~~--~~l~e~l~~-aDiV~~~--lp~~ 210 (286)
++.|++|.|||+|..|.++|+.|+..|++|.++|...... .+.... ...++++.+ +|+|+++ +|.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYN 85 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCC
Confidence 4679999999999999999999999999999999865311 122111 123345666 8999876 3221
Q ss_pred -hhh-------hhcccH-HHHhcCCCCcE-EEEcCCCcccCHHHHHHHHHhCCe
Q 043239 211 -EET-------HHMINK-DVMTALGKEGV-IINVGRGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 211 -~~t-------~~~i~~-~~l~~mk~g~i-lvn~srg~~vd~~al~~al~~~~i 254 (286)
+.. ..++.+ +.+..+.+..+ -|-=+.|......-+...|+....
T Consensus 86 ~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~ 139 (451)
T 3lk7_A 86 NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQ 139 (451)
T ss_dssp SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCC
Confidence 111 113333 33433333333 333358888888888888887654
No 361
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=96.07 E-value=0.0072 Score=53.47 Aligned_cols=40 Identities=28% Similarity=0.413 Sum_probs=35.4
Q ss_pred cccCCCCEEEEEcCC---hHHHHHHHHhccCCCEEEEECCCCC
Q 043239 143 GSTLGGKRVGIVGLG---SIGSEVAKRLVPFGCSIAYTSRKKK 182 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G---~iG~~~A~~l~~~g~~V~~~~r~~~ 182 (286)
...+.||++.|.|.+ .||+.+|+.|...|++|++.+|+.+
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~ 67 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSET 67 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChH
Confidence 446899999999986 8999999999999999999988753
No 362
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.06 E-value=0.0032 Score=57.01 Aligned_cols=63 Identities=22% Similarity=0.217 Sum_probs=48.9
Q ss_pred CCEEEEEcCC-hHHHHHHHHhccC--CCEE-EEECCCCCCCC------Cc-ccccCHHHhhc--CCCEEEEeccCC
Q 043239 148 GKRVGIVGLG-SIGSEVAKRLVPF--GCSI-AYTSRKKKPGV------SY-PFYANVSGLAA--DSDVLIVCCALT 210 (286)
Q Consensus 148 g~~vgIiG~G-~iG~~~A~~l~~~--g~~V-~~~~r~~~~~~------~~-~~~~~l~e~l~--~aDiV~~~lp~~ 210 (286)
-.+|||||+| .+|+..++.++.. ++++ .++|+++++.. +. ..+.+++++++ +.|+|++++|..
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 93 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVE 93 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGG
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCch
Confidence 3589999999 8999999999876 4676 57888765432 22 45789999986 589999999854
No 363
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=96.05 E-value=0.0065 Score=55.15 Aligned_cols=92 Identities=14% Similarity=0.239 Sum_probs=59.6
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCCC----------------cccccCHHHhhcCCCEEEEe
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGVS----------------YPFYANVSGLAADSDVLIVC 206 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~~----------------~~~~~~l~e~l~~aDiV~~~ 206 (286)
....++|+|||.|.||..+|..+...|. ++..+|+..++..+ .....+.+ .+++||+|+++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 3567899999999999999999887776 89999986542210 01123444 58999999988
Q ss_pred ccCCh---hhh-hccc------H---HHHhcCCCCcEEEEcCCC
Q 043239 207 CALTE---ETH-HMIN------K---DVMTALGKEGVIINVGRG 237 (286)
Q Consensus 207 lp~~~---~t~-~~i~------~---~~l~~mk~g~ilvn~srg 237 (286)
....+ .++ .++. + +.+....|++++++++..
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 138 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNP 138 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence 54221 111 1111 1 122333788999999754
No 364
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.04 E-value=0.0023 Score=59.29 Aligned_cols=64 Identities=16% Similarity=0.084 Sum_probs=49.1
Q ss_pred CCEEEEEcCCh---HHHHHHHHhccCC-CEEE--EECCCCCCCC------Cc---ccccCHHHhhcC-------CCEEEE
Q 043239 148 GKRVGIVGLGS---IGSEVAKRLVPFG-CSIA--YTSRKKKPGV------SY---PFYANVSGLAAD-------SDVLIV 205 (286)
Q Consensus 148 g~~vgIiG~G~---iG~~~A~~l~~~g-~~V~--~~~r~~~~~~------~~---~~~~~l~e~l~~-------aDiV~~ 205 (286)
..+|||||+|. ||+..+..++..+ ++++ ++|++.+... +. ..+.++++++++ .|+|++
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i 91 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSI 91 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEE
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEE
Confidence 46899999999 9999998887654 6765 4688765422 33 457899999875 899999
Q ss_pred eccCCh
Q 043239 206 CCALTE 211 (286)
Q Consensus 206 ~lp~~~ 211 (286)
++|...
T Consensus 92 ~tp~~~ 97 (398)
T 3dty_A 92 ATPNGT 97 (398)
T ss_dssp ESCGGG
T ss_pred CCCcHH
Confidence 998553
No 365
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.03 E-value=0.0093 Score=52.59 Aligned_cols=60 Identities=20% Similarity=0.305 Sum_probs=43.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHhc-cCCCEEE-EECCCCCCCC-------------CcccccCHHHhhcCCCEEEEec
Q 043239 148 GKRVGIVGL-GSIGSEVAKRLV-PFGCSIA-YTSRKKKPGV-------------SYPFYANVSGLAADSDVLIVCC 207 (286)
Q Consensus 148 g~~vgIiG~-G~iG~~~A~~l~-~~g~~V~-~~~r~~~~~~-------------~~~~~~~l~e~l~~aDiV~~~l 207 (286)
.++|+|+|+ |.||+.+++.+. .-|++++ +++++..... +.....++++++.++|+|+-+.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft 80 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFT 80 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECS
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcC
Confidence 368999998 999999999876 4578876 6777653210 1222467888888999999454
No 366
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=96.01 E-value=0.0069 Score=55.10 Aligned_cols=87 Identities=16% Similarity=0.204 Sum_probs=54.4
Q ss_pred CEEEEEc-CChHHHHHHHHhccC-CCEEEEE-CCCCCCCC------------Cc--cccc---CHHHhhcCCCEEEEecc
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVPF-GCSIAYT-SRKKKPGV------------SY--PFYA---NVSGLAADSDVLIVCCA 208 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~~-g~~V~~~-~r~~~~~~------------~~--~~~~---~l~e~l~~aDiV~~~lp 208 (286)
.+|+|+| .|.+|+.+.+.|... .+++... +++..+.. +. ..+. +.+++++++|+|+.|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 5899999 699999999999874 4576544 33311111 10 0111 34455589999999998
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCccc
Q 043239 209 LTEETHHMINKDVMTALGKEGVIINVGRGALI 240 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~v 240 (286)
... +..+. ... ++.|+.+||.|..--.
T Consensus 85 ~~~-s~~~~-~~~---~~~g~~vIDlSa~fR~ 111 (337)
T 3dr3_A 85 HEV-SHDLA-PQF---LEAGCVVFDLSGAFRV 111 (337)
T ss_dssp HHH-HHHHH-HHH---HHTTCEEEECSSTTSS
T ss_pred hHH-HHHHH-HHH---HHCCCEEEEcCCcccc
Confidence 432 22221 222 4679999999865434
No 367
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=95.99 E-value=0.0084 Score=54.35 Aligned_cols=105 Identities=10% Similarity=0.111 Sum_probs=63.2
Q ss_pred CEEEEEcCChHHHHHHHHhccC--------CCEEE-EECCCCCCCCC-c------------c---ccc---CHHHhh-cC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF--------GCSIA-YTSRKKKPGVS-Y------------P---FYA---NVSGLA-AD 199 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~--------g~~V~-~~~r~~~~~~~-~------------~---~~~---~l~e~l-~~ 199 (286)
.+|||||+|.||+.+++.+... +++|. +++++...... . . ... ++++++ .+
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~ 86 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALARD 86 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHSS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCCC
Confidence 4899999999999999988653 35654 66776543221 1 0 123 788887 35
Q ss_pred CCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHhCCe
Q 043239 200 SDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGAL-IDEKELVHFLVRGSL 254 (286)
Q Consensus 200 aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~-vd~~al~~al~~~~i 254 (286)
.|+|+.|+|.. .+...-.+.....++.|.-+|...-..+ ...+.|.++.++.+.
T Consensus 87 iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv 141 (331)
T 3c8m_A 87 FDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNR 141 (331)
T ss_dssp CSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTC
T ss_pred CCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCC
Confidence 89999999964 1111111223344566766665433333 244566666666554
No 368
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.99 E-value=0.0095 Score=54.22 Aligned_cols=38 Identities=21% Similarity=0.549 Sum_probs=33.7
Q ss_pred ccCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCC
Q 043239 144 STLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKK 181 (286)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~ 181 (286)
..|++++|.|+|+|.+|..+|+.|...|. +++++|+..
T Consensus 30 ~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 30 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 46899999999999999999999999998 788887643
No 369
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.99 E-value=0.044 Score=51.20 Aligned_cols=105 Identities=18% Similarity=0.269 Sum_probs=71.9
Q ss_pred cccCCCCEEEEEcCChHHHHHHHHhccCCCEEE-EECCCCCC--CC--------------C-ccc-ccCHHHhh-cCCCE
Q 043239 143 GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIA-YTSRKKKP--GV--------------S-YPF-YANVSGLA-ADSDV 202 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~-~~~r~~~~--~~--------------~-~~~-~~~l~e~l-~~aDi 202 (286)
+.++.|++|.|.|+|++|+.+|+.|...|.+|+ +.|++..- .. + ... ..+-++++ ..||+
T Consensus 213 g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~DV 292 (419)
T 3aoe_E 213 GLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAEV 292 (419)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCSE
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhccCceE
Confidence 446899999999999999999999999999987 55553210 00 0 000 01113333 37999
Q ss_pred EEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 203 LIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 203 V~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
++-|. +.+.|+.+..+.++- .+++.-+.+.+. .+ -.+.|.+++|.
T Consensus 293 liP~A-----~~n~i~~~~A~~l~a-k~V~EgAN~p~t-~~-A~~~L~~~Gi~ 337 (419)
T 3aoe_E 293 LVLAA-----REGALDGDRARQVQA-QAVVEVANFGLN-PE-AEAYLLGKGAL 337 (419)
T ss_dssp EEECS-----CTTCBCHHHHTTCCC-SEEEECSTTCBC-HH-HHHHHHHHTCE
T ss_pred EEecc-----cccccccchHhhCCc-eEEEECCCCcCC-HH-HHHHHHHCCCE
Confidence 98774 456788888888854 588999998864 33 34667777665
No 370
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.98 E-value=0.004 Score=56.96 Aligned_cols=63 Identities=14% Similarity=0.191 Sum_probs=47.8
Q ss_pred CCEEEEEcCChHHH-HHHHHhccCCCEEE-EECCCCCCCC------C-cccccCHHHhhcC--CCEEEEeccCC
Q 043239 148 GKRVGIVGLGSIGS-EVAKRLVPFGCSIA-YTSRKKKPGV------S-YPFYANVSGLAAD--SDVLIVCCALT 210 (286)
Q Consensus 148 g~~vgIiG~G~iG~-~~A~~l~~~g~~V~-~~~r~~~~~~------~-~~~~~~l~e~l~~--aDiV~~~lp~~ 210 (286)
..+|||||+|.+|. .++..+..-+++++ ++|++.++.. + ...+.++++++++ .|+|++++|..
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~ 99 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSS 99 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHH
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 45999999999995 56777776788865 7788765422 2 3457899999975 89999999843
No 371
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=95.97 E-value=0.12 Score=47.35 Aligned_cols=127 Identities=13% Similarity=0.080 Sum_probs=83.0
Q ss_pred HHhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcccCCCCEEEEEcCC--hHHHHHHH
Q 043239 88 ECRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGSTLGGKRVGIVGLG--SIGSEVAK 165 (286)
Q Consensus 88 ~~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~l~g~~vgIiG~G--~iG~~~A~ 165 (286)
.+...+|+|.|.-+...-++ .+|+=++.+.++. .+..+.|.+|+++|=+ ++..+.+.
T Consensus 142 la~~s~vPVING~g~~~HPt--QaL~Dl~Ti~e~~-------------------~~~~l~gl~ia~vGD~~~~va~S~~~ 200 (358)
T 4h31_A 142 LGAFAGVPVWNGLTDEFHPT--QILADFLTMLEHS-------------------QGKALADIQFAYLGDARNNVGNSLMV 200 (358)
T ss_dssp HHHHSSSCEEESCCSSCCHH--HHHHHHHHHHHTT-------------------TTCCGGGCEEEEESCTTSHHHHHHHH
T ss_pred hhhhccCceECCCCcCCCch--HHHHHHHHHHHHh-------------------cCCCcCceEEEecCCCCcccchHHHH
Confidence 34556899999444332222 3444444433321 1235889999999954 89999999
Q ss_pred HhccCCCEEEEECCCCCCCC--------------C--cccccCHHHhhcCCCEEEEecc----CChh---------hhhc
Q 043239 166 RLVPFGCSIAYTSRKKKPGV--------------S--YPFYANVSGLAADSDVLIVCCA----LTEE---------THHM 216 (286)
Q Consensus 166 ~l~~~g~~V~~~~r~~~~~~--------------~--~~~~~~l~e~l~~aDiV~~~lp----~~~~---------t~~~ 216 (286)
.+..+|++|.+..+..-... + +....+++|+++++|+|.+-.= ..++ ...-
T Consensus 201 ~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~s~~~~~~~~~~~~~~~~~y~ 280 (358)
T 4h31_A 201 GAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALMKPYQ 280 (358)
T ss_dssp HHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGC
T ss_pred HHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEEEEEEEcccCchhHHHHHHHHhCcc
Confidence 99999999998887442211 1 2235789999999999975321 1111 1234
Q ss_pred ccHHHHhc-CCCCcEEEEcC
Q 043239 217 INKDVMTA-LGKEGVIINVG 235 (286)
Q Consensus 217 i~~~~l~~-mk~g~ilvn~s 235 (286)
++.+.++. .||+++|.-+.
T Consensus 281 v~~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 281 VNMNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp BCHHHHHHTTCTTCEEEECS
T ss_pred cCHHHHHhcCCCCcEEECCC
Confidence 67888876 47899999885
No 372
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=95.97 E-value=0.018 Score=54.47 Aligned_cols=108 Identities=19% Similarity=0.276 Sum_probs=75.2
Q ss_pred CCCCEEEEEcCC----hHHHHHHHHhccCC-CEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHH
Q 043239 146 LGGKRVGIVGLG----SIGSEVAKRLVPFG-CSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKD 220 (286)
Q Consensus 146 l~g~~vgIiG~G----~iG~~~A~~l~~~g-~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~ 220 (286)
++-++|+|||.+ .+|..+.+.|+..| ..|+.+++......+...+.++.++....|++++++|. +....++.+
T Consensus 6 ~~p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~~~i~G~~~y~sl~~lp~~~Dlavi~vp~-~~~~~~v~e- 83 (457)
T 2csu_A 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVPK-RFVKDTLIQ- 83 (457)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEECSCH-HHHHHHHHH-
T ss_pred cCCCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCCCeECCEeccCCHHHcCCCCCEEEEecCH-HHHHHHHHH-
Confidence 456799999998 89999999999884 78988988755555666778899988889999999983 344444432
Q ss_pred HHhcCCCCcEEEEcCCC--cccC-----HHHHHHHHHhCCeeEE
Q 043239 221 VMTALGKEGVIINVGRG--ALID-----EKELVHFLVRGSLVEL 257 (286)
Q Consensus 221 ~l~~mk~g~ilvn~srg--~~vd-----~~al~~al~~~~i~ga 257 (286)
..+. .-.. +|..+.| +.-+ ++.+.+.+++.+++-.
T Consensus 84 ~~~~-Gi~~-vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~vi 125 (457)
T 2csu_A 84 CGEK-GVKG-VVIITAGFGETGEEGKREEKELVEIAHKYGMRII 125 (457)
T ss_dssp HHHH-TCCE-EEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHc-CCCE-EEEecCCCCccccccHHHHHHHHHHHHHcCCEEE
Confidence 2221 2223 3444333 2223 6788888888776643
No 373
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.93 E-value=0.012 Score=51.87 Aligned_cols=61 Identities=16% Similarity=0.250 Sum_probs=46.8
Q ss_pred CCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCC---------CcccccCHHHhhcCCCEEEEeccC
Q 043239 148 GKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGV---------SYPFYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 148 g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~---------~~~~~~~l~e~l~~aDiV~~~lp~ 209 (286)
+++|.|.| .|.+|+.+++.|...|++|.+.+|+..... ... ..++.++++++|+|+.+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHTTTCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhhcCCCEEEEcccc
Confidence 47899999 699999999999999999999998743321 122 34567788899999887653
No 374
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=95.91 E-value=0.013 Score=50.50 Aligned_cols=37 Identities=22% Similarity=0.446 Sum_probs=32.9
Q ss_pred cCCCCEEEEEcC-Ch--HHHHHHHHhccCCCEEEEECCCC
Q 043239 145 TLGGKRVGIVGL-GS--IGSEVAKRLVPFGCSIAYTSRKK 181 (286)
Q Consensus 145 ~l~g~~vgIiG~-G~--iG~~~A~~l~~~g~~V~~~~r~~ 181 (286)
++.|+++.|.|. |. ||..+|+.|...|++|++.+|+.
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 578999999997 45 99999999999999999888765
No 375
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.91 E-value=0.0052 Score=56.05 Aligned_cols=63 Identities=17% Similarity=0.248 Sum_probs=47.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHhccCCC--EEEEECCCCCCCC--------------CcccccCHHHhhcCCCEEEEecc
Q 043239 146 LGGKRVGIVGL-GSIGSEVAKRLVPFGC--SIAYTSRKKKPGV--------------SYPFYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 146 l~g~~vgIiG~-G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~--------------~~~~~~~l~e~l~~aDiV~~~lp 208 (286)
+.+++|+|||. |.+|..+|..+...|. +|..+|...++.. ......+..+.+++||+|+++..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 35689999998 9999999998887774 8999998653211 11123577788999999999853
No 376
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.90 E-value=0.015 Score=51.42 Aligned_cols=60 Identities=22% Similarity=0.261 Sum_probs=43.6
Q ss_pred CEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCC---------CCcc-------cccCHHHhhcCCCEEEEecc
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPG---------VSYP-------FYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~---------~~~~-------~~~~l~e~l~~aDiV~~~lp 208 (286)
++|.|.| .|.+|+.+++.|...|++|.+.+|+.... .+.. ...++.++++.+|+|+.+.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 5899999 59999999999999999999998876421 1111 12345566777887776654
No 377
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.90 E-value=0.015 Score=51.46 Aligned_cols=61 Identities=15% Similarity=0.170 Sum_probs=44.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCC-CCC-------------CCc-------ccccCHHHhhcCCCEEEE
Q 043239 148 GKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKK-KPG-------------VSY-------PFYANVSGLAADSDVLIV 205 (286)
Q Consensus 148 g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~-~~~-------------~~~-------~~~~~l~e~l~~aDiV~~ 205 (286)
.++|.|.|. |.+|+.+++.|...|++|.+.+|+. ... .+. ....++.++++.+|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 468999994 9999999999999999999998875 210 111 112345667777888777
Q ss_pred ecc
Q 043239 206 CCA 208 (286)
Q Consensus 206 ~lp 208 (286)
+..
T Consensus 84 ~a~ 86 (321)
T 3c1o_A 84 ALP 86 (321)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 378
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.90 E-value=0.048 Score=49.77 Aligned_cols=88 Identities=25% Similarity=0.285 Sum_probs=57.4
Q ss_pred CCEEEEEc-CChHHHHHHHHhccCCC-EEEEE-CCCCC-CC---------CCcc-cccCHHHhhcCCCEEEEeccCChhh
Q 043239 148 GKRVGIVG-LGSIGSEVAKRLVPFGC-SIAYT-SRKKK-PG---------VSYP-FYANVSGLAADSDVLIVCCALTEET 213 (286)
Q Consensus 148 g~~vgIiG-~G~iG~~~A~~l~~~g~-~V~~~-~r~~~-~~---------~~~~-~~~~l~e~l~~aDiV~~~lp~~~~t 213 (286)
-.+|||+| .|-.|+.+.+.|...-. ++... +++.. +. .... ...+.++++.++|++++|+|...
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~~-- 90 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGA-- 90 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTH--
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcHH--
Confidence 45899997 79999999999997643 66544 32211 10 0001 11245555688999999999542
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCcccCH
Q 043239 214 HHMINKDVMTALGKEGVIINVGRGALIDE 242 (286)
Q Consensus 214 ~~~i~~~~l~~mk~g~ilvn~srg~~vd~ 242 (286)
.++..+.+ .|+.+||.|..--.+.
T Consensus 91 ----s~~~~~~~-~g~~VIDlSsdfRl~~ 114 (351)
T 1vkn_A 91 ----SYDLVREL-KGVKIIDLGADFRFDD 114 (351)
T ss_dssp ----HHHHHTTC-CSCEEEESSSTTTCSS
T ss_pred ----HHHHHHHh-CCCEEEECChhhhCCc
Confidence 24455556 7999999986544443
No 379
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=95.88 E-value=0.0083 Score=52.01 Aligned_cols=62 Identities=18% Similarity=0.233 Sum_probs=47.9
Q ss_pred CCCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCCC---------cccccCHHHhhcCCCEEEEecc
Q 043239 147 GGKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGVS---------YPFYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~---------~~~~~~l~e~l~~aDiV~~~lp 208 (286)
.+++|.|.| .|.||+.+++.|...|++|.+.+|+..+... .....++.+++++.|+|+.+..
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag 73 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGCDGIVHLGG 73 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence 467899998 7999999999999999999999988765431 1112346678889999987753
No 380
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.86 E-value=0.018 Score=54.59 Aligned_cols=91 Identities=12% Similarity=0.177 Sum_probs=65.4
Q ss_pred CCCCEEEEEcCCh----------HHHHHHHHhccCCCEEEEECCCCCCCC------------------CcccccCHHHhh
Q 043239 146 LGGKRVGIVGLGS----------IGSEVAKRLVPFGCSIAYTSRKKKPGV------------------SYPFYANVSGLA 197 (286)
Q Consensus 146 l~g~~vgIiG~G~----------iG~~~A~~l~~~g~~V~~~~r~~~~~~------------------~~~~~~~l~e~l 197 (286)
+.|++|+|+|+.- -...+++.|...|.+|.+||+...... ......+..+.+
T Consensus 327 ~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (467)
T 2q3e_A 327 VTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEAC 406 (467)
T ss_dssp CTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHHH
T ss_pred cCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHHH
Confidence 6799999999874 788999999999999999999643211 112235788899
Q ss_pred cCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 043239 198 ADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGA 238 (286)
Q Consensus 198 ~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~ 238 (286)
+++|.|++++.- ++-+.+=-......|+...+++|. |+-
T Consensus 407 ~~ad~~vi~t~~-~~f~~~~~~~~~~~~~~~~~i~D~-r~~ 445 (467)
T 2q3e_A 407 DGAHAVVICTEW-DMFKELDYERIHKKMLKPAFIFDG-RRV 445 (467)
T ss_dssp TTCSEEEECSCC-GGGGGSCHHHHHHHSCSSCEEEES-SCT
T ss_pred hCCcEEEEecCC-hhhhcCCHHHHHHhcCCCCEEEeC-CCc
Confidence 999999998763 344433223445667776668887 554
No 381
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.86 E-value=0.014 Score=50.74 Aligned_cols=61 Identities=8% Similarity=0.076 Sum_probs=46.7
Q ss_pred CEEEEEc-CChHHHHHHHHhccC-CCEEEEECCCCCCCC-----Cc-------ccccCHHHhhcCCCEEEEeccC
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVPF-GCSIAYTSRKKKPGV-----SY-------PFYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~~-g~~V~~~~r~~~~~~-----~~-------~~~~~l~e~l~~aDiV~~~lp~ 209 (286)
|+|.|.| .|.+|+.+++.|... |++|.+.+|+..+.. +. ....++.++++.+|+|+.+...
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 4789999 599999999999987 899999988765432 11 1124567789999999887654
No 382
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.84 E-value=0.015 Score=55.01 Aligned_cols=93 Identities=14% Similarity=0.212 Sum_probs=66.0
Q ss_pred cccCCCCEEEEEcCC----------hHHHHHHHHhccCCCEEEEECCCCCCCC----C--cccccCHHHhhcCCCEEEEe
Q 043239 143 GSTLGGKRVGIVGLG----------SIGSEVAKRLVPFGCSIAYTSRKKKPGV----S--YPFYANVSGLAADSDVLIVC 206 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G----------~iG~~~A~~l~~~g~~V~~~~r~~~~~~----~--~~~~~~l~e~l~~aDiV~~~ 206 (286)
+..+.|++|+|+|+- .-...+++.|...|.+|.+||+...... + .....++.+.++++|.|+++
T Consensus 313 ~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~ 392 (450)
T 3gg2_A 313 KGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHV 392 (450)
T ss_dssp TTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEEC
T ss_pred cccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHHHHhcCccceecCCHHHHhcCCCEEEEc
Confidence 345789999999985 3578999999999999999998763211 1 23346888999999999998
Q ss_pred ccCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 043239 207 CALTEETHHMINKDVMTALGKEGVIINVGRGA 238 (286)
Q Consensus 207 lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~ 238 (286)
+. .++-+.+=-....+.|+ +.+++|. |+-
T Consensus 393 t~-~~~f~~~~~~~~~~~~~-~~~i~D~-r~~ 421 (450)
T 3gg2_A 393 TE-WKEFRMPDWSALSQAMA-ASLVIDG-RNV 421 (450)
T ss_dssp SC-CGGGSSCCHHHHHHHSS-SCEEEES-SCC
T ss_pred cC-CHHHhhcCHHHHHHhcC-CCEEEEC-CCC
Confidence 75 33333322233455575 5689996 554
No 383
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=95.83 E-value=0.012 Score=53.95 Aligned_cols=92 Identities=16% Similarity=0.160 Sum_probs=61.3
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEeccCChhhhhcccHHHHhc--C
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTA--L 225 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~lp~~~~t~~~i~~~~l~~--m 225 (286)
-.++.|+|.|.+|+++++.++.+|++|+++|..++... .+-+..+|-++...| .+.+.. +
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~~--------~~~fp~a~~v~~~~p----------~~~~~~~~~ 260 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCE--------KHFFPDADEIIVDFP----------ADFLRKFLI 260 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGGC--------GGGCTTCSEEEESCH----------HHHHHHSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCccccc--------cccCCCceEEecCCH----------HHHHhhcCC
Confidence 45899999999999999999999999999987643321 112345565544333 112222 4
Q ss_pred CCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEE
Q 043239 226 GKEGVIINVGRGALIDEKELVHFLVRGSLVELV 258 (286)
Q Consensus 226 k~g~ilvn~srg~~vd~~al~~al~~~~i~ga~ 258 (286)
.+++.+|=+.++.-.|...|..+|+. ...+.+
T Consensus 261 ~~~t~vvv~TH~h~~D~~~L~~aL~~-~~~YiG 292 (362)
T 3on5_A 261 RPDDFVLIMTHHFQKDQEILHFLLEK-ELRYIG 292 (362)
T ss_dssp CTTCEEEECCSCHHHHHHHHHHHSSS-CCSEEE
T ss_pred CCCeEEEEEeCCchhhHHHHHHHhcC-CCCEEE
Confidence 56677777777777777777777765 444444
No 384
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=95.83 E-value=0.015 Score=51.18 Aligned_cols=40 Identities=30% Similarity=0.356 Sum_probs=34.8
Q ss_pred cccCCCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCC
Q 043239 143 GSTLGGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKK 182 (286)
Q Consensus 143 ~~~l~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~ 182 (286)
..++.||++.|.|. |.||+.+|+.|...|++|++.+|+..
T Consensus 42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 82 (291)
T 3ijr_A 42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEE 82 (291)
T ss_dssp CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 34689999999985 78999999999999999998887654
No 385
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=95.82 E-value=0.03 Score=49.82 Aligned_cols=86 Identities=21% Similarity=0.180 Sum_probs=63.5
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHhccCCCEEEEECCCCCCCC-----CcccccCHHHhhcCCCEEEEeccCChh-----
Q 043239 146 LGGKRVGIVGL---GSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPFYANVSGLAADSDVLIVCCALTEE----- 212 (286)
Q Consensus 146 l~g~~vgIiG~---G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~~~~l~e~l~~aDiV~~~lp~~~~----- 212 (286)
+.|.+|+++|= +++..+++..+..+|++|.+..+..-... +.....+++|+++++|+|.+ +-...+
T Consensus 144 l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~-~~~q~er~~~~ 222 (291)
T 3d6n_B 144 VKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW-LRLQKERQKEN 222 (291)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE-CCCCTHHHHTT
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE-eCcccCccccc
Confidence 78999999996 89999999999999999998887443222 23346899999999999988 443221
Q ss_pred ---------hhhcccHHHHhcCCCCcEEEEcC
Q 043239 213 ---------THHMINKDVMTALGKEGVIINVG 235 (286)
Q Consensus 213 ---------t~~~i~~~~l~~mk~g~ilvn~s 235 (286)
...-++.+.++.+| +|.-+.
T Consensus 223 ~~~~~~~~~~~y~v~~~~l~~a~---i~mH~l 251 (291)
T 3d6n_B 223 YIPSESSYFKQFGLTKERFEKVK---LYMHPG 251 (291)
T ss_dssp SSSCHHHHHHHHSBCHHHHTTCC---CEECSS
T ss_pred cchhHHHHHhhcCcCHHHHHhcc---cccCCC
Confidence 12345667777665 666664
No 386
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.81 E-value=0.0025 Score=57.98 Aligned_cols=62 Identities=19% Similarity=0.312 Sum_probs=42.3
Q ss_pred CEEEEEcCChHHHHHHHHhcc-CCCEEEE-ECCCCCCC------CC------------------cccccCHHHhhcCCCE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVP-FGCSIAY-TSRKKKPG------VS------------------YPFYANVSGLAADSDV 202 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~-~g~~V~~-~~r~~~~~------~~------------------~~~~~~l~e~l~~aDi 202 (286)
.+|||+|+|.||+.+++.|.. -++++.+ .+++.... .+ .....+.++++.++|+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDv 81 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCE
Confidence 489999999999999999876 3567654 45442210 00 0001256677789999
Q ss_pred EEEeccCC
Q 043239 203 LIVCCALT 210 (286)
Q Consensus 203 V~~~lp~~ 210 (286)
|+.|+|..
T Consensus 82 V~~atp~~ 89 (337)
T 1cf2_P 82 VIDCTPEG 89 (337)
T ss_dssp EEECCSTT
T ss_pred EEECCCch
Confidence 99999854
No 387
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.80 E-value=0.011 Score=53.23 Aligned_cols=108 Identities=16% Similarity=0.179 Sum_probs=68.8
Q ss_pred CCCEEEEEcCChHHHH-HHHHhccCCCEEEEECCCCCCC-------CCcccc--cCHHHhh-cCCCEEEEe--ccC-Chh
Q 043239 147 GGKRVGIVGLGSIGSE-VAKRLVPFGCSIAYTSRKKKPG-------VSYPFY--ANVSGLA-ADSDVLIVC--CAL-TEE 212 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~-~A~~l~~~g~~V~~~~r~~~~~-------~~~~~~--~~l~e~l-~~aDiV~~~--lp~-~~~ 212 (286)
..++|.|||.|.+|.+ +|+.|+..|++|.++|.+..+. .+.... .+.+++. .++|+|+.+ +|. .+.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~ 82 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDV 82 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHH
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHH
Confidence 3579999999999996 9999999999999999865432 122211 2344454 579999886 332 222
Q ss_pred hh-------hcccH-HHHhc-C-CCCc-EEEEcCCCcccCHHHHHHHHHhCCe
Q 043239 213 TH-------HMINK-DVMTA-L-GKEG-VIINVGRGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 213 t~-------~~i~~-~~l~~-m-k~g~-ilvn~srg~~vd~~al~~al~~~~i 254 (286)
.. .++.+ +.+.. + +... +-|-=+.|......-+...|+....
T Consensus 83 ~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~ 135 (326)
T 3eag_A 83 VEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGL 135 (326)
T ss_dssp HHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcCC
Confidence 11 13332 23332 3 3322 3444468888888888888887554
No 388
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.78 E-value=0.0037 Score=57.04 Aligned_cols=88 Identities=24% Similarity=0.359 Sum_probs=61.9
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCC---CCCC-----Ccccc-c-CHHHhh----cCCCEEEEeccCC
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKK---KPGV-----SYPFY-A-NVSGLA----ADSDVLIVCCALT 210 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~---~~~~-----~~~~~-~-~l~e~l----~~aDiV~~~lp~~ 210 (286)
.+.|++|.|+|.|.+|..+++.++.+|++|++.+++. ++.. +.... . ++.+.+ ...|+|+.++...
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 5679999999999999999999999999999999876 3321 22111 1 111111 3589999988643
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCC
Q 043239 211 EETHHMINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 211 ~~t~~~i~~~~l~~mk~g~ilvn~sr 236 (286)
... + +..+..|+++..+|+++.
T Consensus 258 ~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 258 VNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp THH---H-HHHGGGEEEEEEEEECSC
T ss_pred HHH---H-HHHHHHHhcCCEEEEEec
Confidence 222 0 456778889888998864
No 389
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.77 E-value=0.0072 Score=53.88 Aligned_cols=38 Identities=29% Similarity=0.399 Sum_probs=33.7
Q ss_pred ccCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCC
Q 043239 144 STLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKK 181 (286)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~ 181 (286)
..|++++|.|||+|.+|..+++.|...|. ++.++|...
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 46899999999999999999999999887 788888644
No 390
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.77 E-value=0.014 Score=52.69 Aligned_cols=62 Identities=19% Similarity=0.243 Sum_probs=45.9
Q ss_pred CCEEEEEc-CChHHHHHHHHhccCC--CEEEEECCCCCC---------CCC--ccc---ccCHHHhhcCCCEEEEeccC
Q 043239 148 GKRVGIVG-LGSIGSEVAKRLVPFG--CSIAYTSRKKKP---------GVS--YPF---YANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 148 g~~vgIiG-~G~iG~~~A~~l~~~g--~~V~~~~r~~~~---------~~~--~~~---~~~l~e~l~~aDiV~~~lp~ 209 (286)
.++|+|+| .|.+|..++..|...| .+|..+|+.... ... ... ..++.+.+++||+|+++.+.
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~ 86 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGV 86 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCc
Confidence 46899999 8999999999998877 688888865531 001 111 12567889999999999753
No 391
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=95.75 E-value=0.0026 Score=57.97 Aligned_cols=63 Identities=11% Similarity=0.177 Sum_probs=45.9
Q ss_pred CEEEEEcCChHHHHHHHHhccC--------CCEEE-EECCCCCCCC------Cc-ccccCHHHhhcC--CCEEEEeccCC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF--------GCSIA-YTSRKKKPGV------SY-PFYANVSGLAAD--SDVLIVCCALT 210 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~--------g~~V~-~~~r~~~~~~------~~-~~~~~l~e~l~~--aDiV~~~lp~~ 210 (286)
.+|||||+|.||+..++.++.. +.+|. ++|++.+... +. ..+.++++++++ .|+|++++|..
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~~ 86 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPGD 86 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCGG
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 4899999999999888776542 23554 6788765432 22 346899999964 79999999855
Q ss_pred h
Q 043239 211 E 211 (286)
Q Consensus 211 ~ 211 (286)
-
T Consensus 87 ~ 87 (390)
T 4h3v_A 87 S 87 (390)
T ss_dssp G
T ss_pred H
Confidence 3
No 392
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.74 E-value=0.021 Score=52.09 Aligned_cols=85 Identities=18% Similarity=0.208 Sum_probs=61.4
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC-----Cccc---c----cCHHHhhc-----CCCEEEEecc
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV-----SYPF---Y----ANVSGLAA-----DSDVLIVCCA 208 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~-----~~~~---~----~~l~e~l~-----~aDiV~~~lp 208 (286)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++.++.. +... . .++.+.+. ..|+|+-++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 57899999999999999999999999 8999988766532 2211 1 23444332 4899998876
Q ss_pred CChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 043239 209 LTEETHHMINKDVMTALGKE-GVIINVGR 236 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~mk~g-~ilvn~sr 236 (286)
.. .+ -...++.++++ ..+|.++-
T Consensus 272 ~~-~~----~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 272 NV-GV----MRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp CH-HH----HHHHHHTBCTTTCEEEECSC
T ss_pred CH-HH----HHHHHHHhhcCCcEEEEEcC
Confidence 32 11 24567889998 88888864
No 393
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.73 E-value=0.0057 Score=55.67 Aligned_cols=87 Identities=24% Similarity=0.297 Sum_probs=59.2
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cccc---c--c-CHHHhh-cCCCEEEEeccCChhhh
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPF---Y--A-NVSGLA-ADSDVLIVCCALTEETH 214 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~---~--~-~l~e~l-~~aDiV~~~lp~~~~t~ 214 (286)
.|.+|.|+|.|.+|...++.++.+|++|++.+++.++.. +... . . ++.+.+ ...|+|+-+++.++ .
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~--~ 256 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLT--D 256 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCST--T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCc--H
Confidence 478999999999999999999999999999998776532 2211 1 1 333333 46899999886410 0
Q ss_pred hcccHHHHhcCCCCcEEEEcCC
Q 043239 215 HMINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~ilvn~sr 236 (286)
..+ ...++.|+++..++.++.
T Consensus 257 ~~~-~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 257 IDF-NIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp CCT-TTGGGGEEEEEEEEECCC
T ss_pred HHH-HHHHHHhcCCCEEEEecC
Confidence 111 245566777777777653
No 394
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.73 E-value=0.0051 Score=58.22 Aligned_cols=71 Identities=17% Similarity=0.177 Sum_probs=49.3
Q ss_pred CCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC-------CCccc-ccCH-HHhhcCCCEEEEeccCCh
Q 043239 141 PLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG-------VSYPF-YANV-SGLAADSDVLIVCCALTE 211 (286)
Q Consensus 141 ~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-------~~~~~-~~~l-~e~l~~aDiV~~~lp~~~ 211 (286)
+..-+++|++|.|+|.|.+|...++.|...|++|+++++..... ..... .... .+.+.++|+|+.+ |..+
T Consensus 5 P~~~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~a-t~~~ 83 (457)
T 1pjq_A 5 PIFCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAA-TDDD 83 (457)
T ss_dssp EEEECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEEC-CSCH
T ss_pred eeEEECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEc-CCCH
Confidence 44567899999999999999999999999999999998754321 01110 0111 2345678888765 4444
Q ss_pred h
Q 043239 212 E 212 (286)
Q Consensus 212 ~ 212 (286)
+
T Consensus 84 ~ 84 (457)
T 1pjq_A 84 T 84 (457)
T ss_dssp H
T ss_pred H
Confidence 3
No 395
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.70 E-value=0.021 Score=52.10 Aligned_cols=85 Identities=18% Similarity=0.176 Sum_probs=60.8
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC-----Cccc---c----cCHHHhhc-----CCCEEEEecc
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV-----SYPF---Y----ANVSGLAA-----DSDVLIVCCA 208 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~-----~~~~---~----~~l~e~l~-----~aDiV~~~lp 208 (286)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++.++.. +... . .++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 57899999999999999999999999 8999988766431 2211 1 23444332 4899998876
Q ss_pred CChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 043239 209 LTEETHHMINKDVMTALGKE-GVIINVGR 236 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~mk~g-~ilvn~sr 236 (286)
.. ++ -...++.++++ ..+|.++-
T Consensus 271 ~~-~~----~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 271 RL-DT----MVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp CH-HH----HHHHHHHBCTTTCEEEECSC
T ss_pred CH-HH----HHHHHHHhhcCCcEEEEecc
Confidence 32 21 14567788998 88888763
No 396
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=95.70 E-value=0.01 Score=55.47 Aligned_cols=61 Identities=21% Similarity=0.280 Sum_probs=45.9
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC----------CcccccCHHHhhcCCCEEEE
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV----------SYPFYANVSGLAADSDVLIV 205 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----------~~~~~~~l~e~l~~aDiV~~ 205 (286)
-+.|++|+|+|-|.+|+.+++.++.+|++|.++++.+.... .......+.++++++|+|+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 46799999999999999999999999999999987654311 01111234566778998874
No 397
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=95.68 E-value=0.016 Score=53.01 Aligned_cols=62 Identities=11% Similarity=0.155 Sum_probs=45.0
Q ss_pred CEEEEEc-CChHHHH-HH----HHhccCC-CEE----------EEECCCCCCCC------Cc-ccccCHHHhhcC--CCE
Q 043239 149 KRVGIVG-LGSIGSE-VA----KRLVPFG-CSI----------AYTSRKKKPGV------SY-PFYANVSGLAAD--SDV 202 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~-~A----~~l~~~g-~~V----------~~~~r~~~~~~------~~-~~~~~l~e~l~~--aDi 202 (286)
.+||||| +|.||+. .+ +.++..+ ..+ .+++++.++.. +. ..+.++++++++ .|+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~ 86 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDTM 86 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCE
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCE
Confidence 4899999 9999998 66 6665443 222 38888776432 33 346899999976 899
Q ss_pred EEEeccCC
Q 043239 203 LIVCCALT 210 (286)
Q Consensus 203 V~~~lp~~ 210 (286)
|+++.|..
T Consensus 87 V~i~tp~~ 94 (383)
T 3oqb_A 87 FFDAATTQ 94 (383)
T ss_dssp EEECSCSS
T ss_pred EEECCCch
Confidence 99999854
No 398
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.68 E-value=0.005 Score=56.42 Aligned_cols=85 Identities=22% Similarity=0.314 Sum_probs=59.7
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cccc---ccC---HHHhhcCCCEEEEeccCChhhhh
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPF---YAN---VSGLAADSDVLIVCCALTEETHH 215 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~---~~~---l~e~l~~aDiV~~~lp~~~~t~~ 215 (286)
.|.+|.|+|.|.+|...++.++.+|++|++.+++.++.. +... ..+ .+++....|+|+-++.....
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~--- 270 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHN--- 270 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHH---
Confidence 478999999999999999999999999999888765432 2211 111 22333568999988763211
Q ss_pred cccHHHHhcCCCCcEEEEcCC
Q 043239 216 MINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 216 ~i~~~~l~~mk~g~ilvn~sr 236 (286)
-...++.|+++..+|.++.
T Consensus 271 --~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 271 --LDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp --HHHHHTTEEEEEEEEECCC
T ss_pred --HHHHHHHhccCCEEEEecc
Confidence 2356677888888887764
No 399
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=95.67 E-value=0.012 Score=49.43 Aligned_cols=91 Identities=20% Similarity=0.088 Sum_probs=59.0
Q ss_pred cCCCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhh---cCCCEEEEeccCCh-------hh
Q 043239 145 TLGGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLA---ADSDVLIVCCALTE-------ET 213 (286)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l---~~aDiV~~~lp~~~-------~t 213 (286)
++.||++.|.|. |.||+.+|+.|.+.|++|.+.+|+.+- ......++++++ ...|+++.+.-... .+
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~--D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~ 80 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGL--DISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVE 80 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGTC--CTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCccc--CCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCC
Confidence 367889999985 789999999999999999999987651 111122333443 46798887754220 00
Q ss_pred ----hh----------cccHHHHhcCCCCcEEEEcCCC
Q 043239 214 ----HH----------MINKDVMTALGKEGVIINVGRG 237 (286)
Q Consensus 214 ----~~----------~i~~~~l~~mk~g~ilvn~srg 237 (286)
.. .+.+..++.|+++..|||+|..
T Consensus 81 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~ 118 (223)
T 3uce_A 81 VTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM 118 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred HHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence 00 0123455677777889999754
No 400
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.66 E-value=0.0052 Score=53.28 Aligned_cols=59 Identities=17% Similarity=0.216 Sum_probs=43.9
Q ss_pred EEEEEcC-ChHHHHHHHHhccC--CCEEEEECCCCCCCC-----Cc-------ccccCHHHhhcCCCEEEEecc
Q 043239 150 RVGIVGL-GSIGSEVAKRLVPF--GCSIAYTSRKKKPGV-----SY-------PFYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 150 ~vgIiG~-G~iG~~~A~~l~~~--g~~V~~~~r~~~~~~-----~~-------~~~~~l~e~l~~aDiV~~~lp 208 (286)
+|.|.|. |.+|+.+++.|... |++|.+.+|+..+.. +. ....++.++++++|+|+.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4778886 99999999999998 999999988765431 11 112356678889999987654
No 401
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.65 E-value=0.0099 Score=53.73 Aligned_cols=85 Identities=15% Similarity=0.170 Sum_probs=59.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cccc------ccCHHHhhc-----CCCEEEEeccC
Q 043239 147 GGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPF------YANVSGLAA-----DSDVLIVCCAL 209 (286)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~------~~~l~e~l~-----~aDiV~~~lp~ 209 (286)
.|++|.|+|. |.+|..+++.++..|++|++.+++.++.. +... ..++.+.+. ..|+|+.+...
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 4789999999 89999999999999999999988765321 1110 134444433 47999888753
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCC
Q 043239 210 TEETHHMINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 210 ~~~t~~~i~~~~l~~mk~g~ilvn~sr 236 (286)
.+. -+..++.|+++..+|+++.
T Consensus 249 ~~~-----~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 249 EAA-----IEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHH-----HHHHTTSEEEEEEEEECCC
T ss_pred HHH-----HHHHHHHHhcCCEEEEEeC
Confidence 221 2456677888888888864
No 402
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=95.65 E-value=0.044 Score=49.11 Aligned_cols=90 Identities=21% Similarity=0.234 Sum_probs=65.6
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHhccC-CCEEEEECCCCCCCC----------C--cccccCHHHhhcCCCEEEEec--
Q 043239 146 LGGKRVGIVGL---GSIGSEVAKRLVPF-GCSIAYTSRKKKPGV----------S--YPFYANVSGLAADSDVLIVCC-- 207 (286)
Q Consensus 146 l~g~~vgIiG~---G~iG~~~A~~l~~~-g~~V~~~~r~~~~~~----------~--~~~~~~l~e~l~~aDiV~~~l-- 207 (286)
+.|.+|+++|= |++..+++..+..+ |++|.+..+..-... + +....+++|+++++|+|.+..
T Consensus 149 l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~~q 228 (306)
T 4ekn_B 149 IDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTRIQ 228 (306)
T ss_dssp STTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECCCC
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCCcc
Confidence 78999999997 58999999999999 999998887543211 1 223579999999999998642
Q ss_pred ----cCChhh-----hhcccHHHHhcCCCCcEEEEcC-CC
Q 043239 208 ----ALTEET-----HHMINKDVMTALGKEGVIINVG-RG 237 (286)
Q Consensus 208 ----p~~~~t-----~~~i~~~~l~~mk~g~ilvn~s-rg 237 (286)
|...+- ...++.+.++. ++++|.-+. ||
T Consensus 229 ~er~~~~~e~~~~~~~y~v~~~~l~~--~~ai~mH~lPRg 266 (306)
T 4ekn_B 229 KERFPDPNEYEKVKGSYKIKREYVEG--KKFIIMHPLPRV 266 (306)
T ss_dssp GGGCCSHHHHHHHHHHHCBCHHHHTT--CCCEEECCSCCS
T ss_pred cccCCCHHHHHHhccCcEECHHHHcC--CCCEEECCCCCC
Confidence 111111 24567888876 788888775 55
No 403
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=95.64 E-value=0.23 Score=45.34 Aligned_cols=130 Identities=12% Similarity=0.111 Sum_probs=87.3
Q ss_pred HhhcCeEEEecCCCCCcChHHHHHHHHHHHHhcchHHHHHHHcCCCCCCCCCCCcc-cCCCCE--EEEEcC---C--hHH
Q 043239 89 CRRRGILVTNAGNAFSEDGADYVVGLLVDVLRRVSSIDRFVRNGLWPDHGAYPLGS-TLGGKR--VGIVGL---G--SIG 160 (286)
Q Consensus 89 ~~~~gI~v~n~~~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~-~l~g~~--vgIiG~---G--~iG 160 (286)
++..+|+|.|..... -++ .+|+=++.+.++ .|. .+.|++ |+++|= | ++.
T Consensus 153 A~~~~vPVINag~g~-HPt--QaLaDl~TI~E~--------------------~g~~~l~glkvvva~vGDl~~~~nrva 209 (359)
T 1zq6_A 153 AKYSPVPVINMETIT-HPC--QELAHALALQEH--------------------FGTPDLRGKKYVLTWTYHPKPLNTAVA 209 (359)
T ss_dssp HHHCSSCEEESSSSC-CHH--HHHHHHHHHHHH--------------------HTSSCCTTCEEEEEECCCSSCCCSHHH
T ss_pred HHhCCCCEEeCCCCC-CcH--HHHHHHHHHHHH--------------------hCCCcccCCeeEEEEEecccccccchH
Confidence 455689999976654 333 333333333332 121 278999 999996 4 899
Q ss_pred HHHHHHhccCCCEEEEECCC-CCCCC----------------CcccccCHHHhhcCCCEEEEeccCC-----h-------
Q 043239 161 SEVAKRLVPFGCSIAYTSRK-KKPGV----------------SYPFYANVSGLAADSDVLIVCCALT-----E------- 211 (286)
Q Consensus 161 ~~~A~~l~~~g~~V~~~~r~-~~~~~----------------~~~~~~~l~e~l~~aDiV~~~lp~~-----~------- 211 (286)
.+++..+..+|++|.+..+. .-... .+....+++|+++++|+|.+-.=.. +
T Consensus 210 ~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvVyt~~w~se~~mg~~~~~~~~ 289 (359)
T 1zq6_A 210 NSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPI 289 (359)
T ss_dssp HHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCTTHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEECCccccccCCcchhhHHH
Confidence 99999999999999988876 32211 1123478999999999997754211 1
Q ss_pred ---hhhhcccHHHHhcCCCCcEEEEcC---CCcccCH
Q 043239 212 ---ETHHMINKDVMTALGKEGVIINVG---RGALIDE 242 (286)
Q Consensus 212 ---~t~~~i~~~~l~~mk~g~ilvn~s---rg~~vd~ 242 (286)
.....++.+.++.+| +++|.-+. ||.=|+.
T Consensus 290 ~~~~~~y~vt~e~l~~a~-~ai~MHcLP~~Rg~EI~~ 325 (359)
T 1zq6_A 290 RDQYQHFIVDERKMALTN-NGVFSHCLPLRRNVKATD 325 (359)
T ss_dssp HGGGGGGSBCHHHHHTSS-SCEEECCSCCCBTTTBCH
T ss_pred HHHhcCCCCCHHHHHhCC-CCEEECCCCCCCCceeCH
Confidence 023457888999999 99999885 5654444
No 404
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=95.63 E-value=0.017 Score=49.22 Aligned_cols=39 Identities=18% Similarity=0.194 Sum_probs=33.3
Q ss_pred CCCCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCC
Q 043239 146 LGGKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPG 184 (286)
Q Consensus 146 l~g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~ 184 (286)
..++++.|.| .|.||+.+|+.|...|++|++.+|+....
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 44 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE 44 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhc
Confidence 5688999998 57899999999999999999999876553
No 405
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.63 E-value=0.0049 Score=55.65 Aligned_cols=85 Identities=13% Similarity=0.215 Sum_probs=59.2
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cccc-----ccCHHHhh----cCCCEEEEeccCChh
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPF-----YANVSGLA----ADSDVLIVCCALTEE 212 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~-----~~~l~e~l----~~aDiV~~~lp~~~~ 212 (286)
.|++|.|+|.|.+|..+++.++.+|++|++.+++.++.. +... ..++.+.+ ...|+|+.++...+.
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 243 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA 243 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHH
Confidence 477999999999999999999999999999998764321 2111 12332222 468999988763221
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCC
Q 043239 213 THHMINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 213 t~~~i~~~~l~~mk~g~ilvn~sr 236 (286)
-...++.|+++..++.++.
T Consensus 244 -----~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 244 -----FQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp -----HHHHHHHEEEEEEEEECCC
T ss_pred -----HHHHHHHhhcCCEEEEecc
Confidence 1456677888888888764
No 406
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.61 E-value=0.024 Score=51.73 Aligned_cols=85 Identities=18% Similarity=0.191 Sum_probs=60.8
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC-----Cccc---c----cCHHHhhc-----CCCEEEEecc
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV-----SYPF---Y----ANVSGLAA-----DSDVLIVCCA 208 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~-----~~~~---~----~~l~e~l~-----~aDiV~~~lp 208 (286)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++.++.. +... . .++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 47899999999999999999999999 8999988765432 2211 1 23443332 5899998875
Q ss_pred CChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 043239 209 LTEETHHMINKDVMTALGKE-GVIINVGR 236 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~mk~g-~ilvn~sr 236 (286)
.. ++ -...++.++++ ..+|.++-
T Consensus 271 ~~-~~----~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 271 RI-ET----MMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CH-HH----HHHHHHTBCTTTCEEEECCC
T ss_pred CH-HH----HHHHHHHHhcCCCEEEEEcc
Confidence 32 21 14567888998 88888863
No 407
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.61 E-value=0.04 Score=48.27 Aligned_cols=61 Identities=23% Similarity=0.236 Sum_probs=44.1
Q ss_pred CCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCC-------------CCc-------ccccCHHHhhcCCCEEEEe
Q 043239 148 GKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPG-------------VSY-------PFYANVSGLAADSDVLIVC 206 (286)
Q Consensus 148 g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-------------~~~-------~~~~~l~e~l~~aDiV~~~ 206 (286)
.++|.|.| .|.+|+.+++.|...|++|.+.+|+.... .+. ....++.++++.+|+|+.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 46899999 59999999999999999999999875321 111 1123455667777877766
Q ss_pred cc
Q 043239 207 CA 208 (286)
Q Consensus 207 lp 208 (286)
..
T Consensus 84 a~ 85 (313)
T 1qyd_A 84 LA 85 (313)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 408
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=95.61 E-value=0.022 Score=51.81 Aligned_cols=66 Identities=21% Similarity=0.258 Sum_probs=49.7
Q ss_pred cCCCCEEEEEcC-ChHHHHHHHHhccCC-CEEEEECCCCCCC-------CCcc-------cccCHHHhhcCCCEEEEecc
Q 043239 145 TLGGKRVGIVGL-GSIGSEVAKRLVPFG-CSIAYTSRKKKPG-------VSYP-------FYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~A~~l~~~g-~~V~~~~r~~~~~-------~~~~-------~~~~l~e~l~~aDiV~~~lp 208 (286)
.+++++|.|.|. |.||+.+++.|...| ++|++.+|+.... .... ...+++++++.+|+|+.+..
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 578999999995 999999999999999 9999999875432 1111 11235567788999987765
Q ss_pred CC
Q 043239 209 LT 210 (286)
Q Consensus 209 ~~ 210 (286)
..
T Consensus 109 ~~ 110 (377)
T 2q1s_A 109 YH 110 (377)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 409
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.61 E-value=0.02 Score=55.26 Aligned_cols=78 Identities=15% Similarity=0.113 Sum_probs=56.5
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCCCcc--------cccCHHHh-hcCCCEEEEeccCChhhhhcccH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYP--------FYANVSGL-AADSDVLIVCCALTEETHHMINK 219 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~--------~~~~l~e~-l~~aDiV~~~lp~~~~t~~~i~~ 219 (286)
+++.|+|+|.+|+.+|+.|...|++|++.+.+++...... ....|+++ ++++|.++++.+..+ ..++-.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~--~ni~~~ 426 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIVTTNDDS--TNIFLT 426 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTTSCSEEEECCSCHH--HHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCccccCEEEEECCCch--HHHHHH
Confidence 7899999999999999999999999999998877643211 12334443 789999999987543 333334
Q ss_pred HHHhcCCCC
Q 043239 220 DVMTALGKE 228 (286)
Q Consensus 220 ~~l~~mk~g 228 (286)
.....+.+.
T Consensus 427 ~~ak~l~~~ 435 (565)
T 4gx0_A 427 LACRHLHSH 435 (565)
T ss_dssp HHHHHHCSS
T ss_pred HHHHHHCCC
Confidence 455556665
No 410
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.59 E-value=0.016 Score=53.08 Aligned_cols=83 Identities=13% Similarity=0.163 Sum_probs=51.8
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEEEEECC-CCCC-----------CC----C---------------cccc--cCHH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSIAYTSR-KKKP-----------GV----S---------------YPFY--ANVS 194 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V~~~~r-~~~~-----------~~----~---------------~~~~--~~l~ 194 (286)
.+|||+|+|.||+.+.|.|... .++|++.+- .... .. + .... .+.+
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 97 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDPA 97 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCGG
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCChH
Confidence 4899999999999999998876 577765442 2110 00 0 0011 2444
Q ss_pred Hh-h--cCCCEEEEeccCChhhhhcccHHHHhcCCCCc--EEEEcCC
Q 043239 195 GL-A--ADSDVLIVCCALTEETHHMINKDVMTALGKEG--VIINVGR 236 (286)
Q Consensus 195 e~-l--~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~--ilvn~sr 236 (286)
++ + .++|+|+.|+|..... +..-.+++.|+ ++|+.+.
T Consensus 98 ~i~w~~~~vDvV~eatg~~~s~-----e~a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 98 EIPWGASGAQIVCESTGVFTTE-----EKASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp GCCHHHHTCCEEEECSSSCCSH-----HHHGGGGTTTCSEEEESSCC
T ss_pred HCCcccCCCCEEEECCCchhhH-----HHHHHHHHcCCcEEEEeCCC
Confidence 43 2 5799999998844221 22334467788 8888864
No 411
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.59 E-value=0.03 Score=51.07 Aligned_cols=85 Identities=18% Similarity=0.149 Sum_probs=60.6
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC-----Cccc---c----cCHHHhhc-----CCCEEEEecc
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV-----SYPF---Y----ANVSGLAA-----DSDVLIVCCA 208 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~-----~~~~---~----~~l~e~l~-----~aDiV~~~lp 208 (286)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++.++.. +... . .++.+.+. ..|+|+-++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 57899999999999999999999999 8999988766532 2211 1 23433332 5899998875
Q ss_pred CChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 043239 209 LTEETHHMINKDVMTALGKE-GVIINVGR 236 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~mk~g-~ilvn~sr 236 (286)
.. ++ -...++.++++ ..+|.++-
T Consensus 275 ~~-~~----~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 TA-QT----LKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CH-HH----HHHHHHTBCTTTCEEEECCC
T ss_pred CH-HH----HHHHHHHhhcCCCEEEEECC
Confidence 31 21 24567888998 88888764
No 412
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=95.56 E-value=0.058 Score=50.41 Aligned_cols=106 Identities=18% Similarity=0.253 Sum_probs=71.8
Q ss_pred cccCCCCEEEEEcCChHHHHHHHHhccCCCEEE-EECCCCC---C-------------CCCc------------ccccCH
Q 043239 143 GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIA-YTSRKKK---P-------------GVSY------------PFYANV 193 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~-~~~r~~~---~-------------~~~~------------~~~~~l 193 (286)
|.++.|+++.|.|+|++|+.+|+.|...|.+|+ +.|.+.. + ..+. ....+.
T Consensus 205 g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~ 284 (421)
T 1v9l_A 205 WGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNP 284 (421)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSST
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCc
Confidence 446899999999999999999999999999987 4555321 0 0011 111133
Q ss_pred HHhh-cCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeE
Q 043239 194 SGLA-ADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVE 256 (286)
Q Consensus 194 ~e~l-~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~g 256 (286)
++++ ..||+++-|. +.+.|+.+..+.++- .+++--+.+.+. .+ -.+.|.+++|..
T Consensus 285 ~~~~~~~~Dil~P~A-----~~~~I~~~~a~~l~a-k~V~EgAN~p~t-~~-a~~~l~~~Gi~~ 340 (421)
T 1v9l_A 285 DAIFKLDVDIFVPAA-----IENVIRGDNAGLVKA-RLVVEGANGPTT-PE-AERILYERGVVV 340 (421)
T ss_dssp TGGGGCCCSEEEECS-----CSSCBCTTTTTTCCC-SEEECCSSSCBC-HH-HHHHHHTTTCEE
T ss_pred hhhhcCCccEEEecC-----cCCccchhhHHHcCc-eEEEecCCCcCC-HH-HHHHHHHCCCEE
Confidence 4544 3699998775 455677777777743 577888888864 33 346777777753
No 413
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.55 E-value=0.021 Score=51.96 Aligned_cols=85 Identities=20% Similarity=0.202 Sum_probs=61.0
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC-----Cccc---c----cCHHHhhc-----CCCEEEEecc
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV-----SYPF---Y----ANVSGLAA-----DSDVLIVCCA 208 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~-----~~~~---~----~~l~e~l~-----~aDiV~~~lp 208 (286)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++.++.. +... . .++.+.+. ..|+|+-++.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 57899999999999999999999999 8999988766532 2211 1 23443332 4899998876
Q ss_pred CChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 043239 209 LTEETHHMINKDVMTALGKE-GVIINVGR 236 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~mk~g-~ilvn~sr 236 (286)
.. .+ -...++.++++ ..+|.++-
T Consensus 270 ~~-~~----~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 270 NV-KV----MRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CH-HH----HHHHHHTBCTTTCEEEECSC
T ss_pred cH-HH----HHHHHHhhccCCcEEEEEec
Confidence 32 11 24567889998 88888863
No 414
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=95.55 E-value=0.015 Score=51.54 Aligned_cols=63 Identities=24% Similarity=0.265 Sum_probs=45.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCC-----------Ccc-------cccCHHHhhcC--CCEEEE
Q 043239 147 GGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----------SYP-------FYANVSGLAAD--SDVLIV 205 (286)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----------~~~-------~~~~l~e~l~~--aDiV~~ 205 (286)
.|++|.|.|. |.||+.+++.|...|++|.+.+|+..... ... ...++.++++. .|+|+.
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 81 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN 81 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 5789999996 99999999999999999999998765421 111 11234556665 499987
Q ss_pred eccC
Q 043239 206 CCAL 209 (286)
Q Consensus 206 ~lp~ 209 (286)
+...
T Consensus 82 ~A~~ 85 (345)
T 2z1m_A 82 LAAQ 85 (345)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7543
No 415
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.55 E-value=0.015 Score=50.99 Aligned_cols=61 Identities=16% Similarity=0.136 Sum_probs=47.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHhccCC-CEEEEECCCCCCC-------CCc-------ccccCHHHhhcCCCEEEEecc
Q 043239 148 GKRVGIVGL-GSIGSEVAKRLVPFG-CSIAYTSRKKKPG-------VSY-------PFYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 148 g~~vgIiG~-G~iG~~~A~~l~~~g-~~V~~~~r~~~~~-------~~~-------~~~~~l~e~l~~aDiV~~~lp 208 (286)
+++|.|.|. |.+|+.+++.|.+.| ++|.+.+|+..+. .+. ....++.++++.+|+|+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 578999997 999999999999888 9999998876542 111 112356678899999988764
No 416
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=95.54 E-value=0.014 Score=50.16 Aligned_cols=93 Identities=16% Similarity=0.193 Sum_probs=58.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCCCc------ccccCHHHhhc-------CCCEEEEeccCC-
Q 043239 146 LGGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGVSY------PFYANVSGLAA-------DSDVLIVCCALT- 210 (286)
Q Consensus 146 l~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~------~~~~~l~e~l~-------~aDiV~~~lp~~- 210 (286)
.-++++.|.|. |.||+.+|+.|...|++|++.+|+....... ....+++++++ ..|+++.+....
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~ 99 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWS 99 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 34789999985 7899999999999999999999887654321 11123333333 359888775421
Q ss_pred ------hhh----hhc----------ccHHHHhcCCCCcEEEEcCCCc
Q 043239 211 ------EET----HHM----------INKDVMTALGKEGVIINVGRGA 238 (286)
Q Consensus 211 ------~~t----~~~----------i~~~~l~~mk~g~ilvn~srg~ 238 (286)
+.+ ... +.+..++.|+++..||++|...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 147 (251)
T 3orf_A 100 GGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASA 147 (251)
T ss_dssp CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred CCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechh
Confidence 111 011 1234556677777889987643
No 417
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.50 E-value=0.0065 Score=54.98 Aligned_cols=85 Identities=16% Similarity=0.165 Sum_probs=59.5
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC-----Cccc-----ccCHHHhh------cCCCEEEEeccC
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV-----SYPF-----YANVSGLA------ADSDVLIVCCAL 209 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~-----~~~~-----~~~l~e~l------~~aDiV~~~lp~ 209 (286)
.|++|.|+|.|.+|..+++.++.+|+ +|++.+++.++.. +... ..++.+.+ ...|+|+.++..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 68899999999999999999999999 8999998764321 2110 12333322 158999988763
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCC
Q 043239 210 TEETHHMINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 210 ~~~t~~~i~~~~l~~mk~g~ilvn~sr 236 (286)
.+. -...++.++++..++.++.
T Consensus 247 ~~~-----~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 247 PKA-----LEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp HHH-----HHHHHHHEEEEEEEEECCC
T ss_pred HHH-----HHHHHHHHhcCCEEEEEcc
Confidence 221 1345677788888888764
No 418
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=95.50 E-value=0.012 Score=53.12 Aligned_cols=61 Identities=15% Similarity=0.173 Sum_probs=45.9
Q ss_pred CEEEEEcCChHHHHHHHHhccCCCEEE-EECCCCC-CCC---------C--cccccCHHHhhcC--CCEEEEeccCC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGCSIA-YTSRKKK-PGV---------S--YPFYANVSGLAAD--SDVLIVCCALT 210 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~~V~-~~~r~~~-~~~---------~--~~~~~~l~e~l~~--aDiV~~~lp~~ 210 (286)
.+|||||+|.+|+..++.+ .-+++|+ ++|++.+ ... + ...+.++++++++ .|+|++++|..
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~ 78 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFS 78 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcc
Confidence 4899999999999888877 5577875 6787763 221 2 2356899999864 89999998843
No 419
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.49 E-value=0.051 Score=51.61 Aligned_cols=98 Identities=17% Similarity=0.241 Sum_probs=68.5
Q ss_pred cCCCCEEEEEcCC----------hHHHHHHHHhccCCCEEEEECCCCCCCC---C-------------cccccCHHHhhc
Q 043239 145 TLGGKRVGIVGLG----------SIGSEVAKRLVPFGCSIAYTSRKKKPGV---S-------------YPFYANVSGLAA 198 (286)
Q Consensus 145 ~l~g~~vgIiG~G----------~iG~~~A~~l~~~g~~V~~~~r~~~~~~---~-------------~~~~~~l~e~l~ 198 (286)
.+.|++|+|+|+. .-...+++.|...|.+|.+||+...... . .....++.+.++
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAAR 411 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHHT
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHHc
Confidence 4689999999974 4788899999999999999999753210 0 112357788999
Q ss_pred CCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHH
Q 043239 199 DSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKEL 245 (286)
Q Consensus 199 ~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al 245 (286)
++|.|++++.- ++-+.+--....+.|+...+++|. |+ +.|.+.+
T Consensus 412 ~ad~~vi~t~~-~~f~~~~~~~~~~~~~~~~~i~D~-r~-~~~~~~~ 455 (481)
T 2o3j_A 412 GAHAIVVLTEW-DEFVELNYSQIHNDMQHPAAIFDG-RL-ILDQKAL 455 (481)
T ss_dssp TCSEEEECSCC-GGGTTSCHHHHHHHSCSSCEEEES-SS-CSCHHHH
T ss_pred CCCEEEEcCCc-HHhhccCHHHHHHhcCCCCEEEEC-CC-CCCHHHH
Confidence 99999998763 333333223455568776688987 54 3565443
No 420
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.49 E-value=0.016 Score=52.48 Aligned_cols=86 Identities=19% Similarity=0.213 Sum_probs=59.9
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cccc---c---cC----HHHhh-----cCCCEEEEe
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPF---Y---AN----VSGLA-----ADSDVLIVC 206 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~---~---~~----l~e~l-----~~aDiV~~~ 206 (286)
.|++|.|+|.|.+|...++.++.+|++|++.+++.++.. +... . .+ +.+.. ...|+|+-+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 478999999999999999999999999988887654321 2110 1 12 22222 258999988
Q ss_pred ccCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 043239 207 CALTEETHHMINKDVMTALGKEGVIINVGRG 237 (286)
Q Consensus 207 lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg 237 (286)
+... .+ -...+..++++..+|.++.+
T Consensus 248 ~g~~-~~----~~~~~~~l~~~G~iv~~G~~ 273 (352)
T 1e3j_A 248 SGNE-KC----ITIGINITRTGGTLMLVGMG 273 (352)
T ss_dssp SCCH-HH----HHHHHHHSCTTCEEEECSCC
T ss_pred CCCH-HH----HHHHHHHHhcCCEEEEEecC
Confidence 7632 11 14567788999999988743
No 421
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=95.48 E-value=0.013 Score=52.86 Aligned_cols=64 Identities=20% Similarity=0.183 Sum_probs=47.5
Q ss_pred cCCCCEEEEEc-CChHHHHHHHHhccC-CCEEEEECCCCCCCC------Cc-------c-cccCHHHhhcCCCEEEEecc
Q 043239 145 TLGGKRVGIVG-LGSIGSEVAKRLVPF-GCSIAYTSRKKKPGV------SY-------P-FYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 145 ~l~g~~vgIiG-~G~iG~~~A~~l~~~-g~~V~~~~r~~~~~~------~~-------~-~~~~l~e~l~~aDiV~~~lp 208 (286)
.+.+++|.|.| .|.||+.+++.|... |++|++.+|+..... .. . ...++.++++++|+|+.+..
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~ 100 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA 100 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence 46789999999 699999999999987 999999998765532 11 1 12235567889999987654
No 422
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=95.47 E-value=0.023 Score=51.66 Aligned_cols=29 Identities=28% Similarity=0.458 Sum_probs=24.2
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEEEEE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSIAYT 177 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V~~~ 177 (286)
.+|||+|+|.||+.+++.|... +++|.+.
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI 33 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAV 33 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEE
Confidence 4899999999999999998765 5676644
No 423
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=95.47 E-value=0.033 Score=48.58 Aligned_cols=39 Identities=31% Similarity=0.418 Sum_probs=33.7
Q ss_pred cccCCCCEEEEEcC-Ch--HHHHHHHHhccCCCEEEEECCCC
Q 043239 143 GSTLGGKRVGIVGL-GS--IGSEVAKRLVPFGCSIAYTSRKK 181 (286)
Q Consensus 143 ~~~l~g~~vgIiG~-G~--iG~~~A~~l~~~g~~V~~~~r~~ 181 (286)
...+.|+++.|.|. |. ||.++|+.|...|++|++.+|+.
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 34689999999996 45 99999999999999999998875
No 424
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=95.46 E-value=0.018 Score=54.95 Aligned_cols=62 Identities=23% Similarity=0.210 Sum_probs=48.3
Q ss_pred CCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCCCc--ccccCHHHhhcCCCEEEEeccC
Q 043239 148 GKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSY--PFYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 148 g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~--~~~~~l~e~l~~aDiV~~~lp~ 209 (286)
+++|.|.| .|.||+.+++.|...|++|++.+|+....... .....+.+.+.++|+|+.+...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGE 211 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecccchhHHhcCCCCEEEECCCC
Confidence 68999999 69999999999999999999999987654321 1123455678899999876543
No 425
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=95.45 E-value=0.015 Score=49.26 Aligned_cols=38 Identities=16% Similarity=0.249 Sum_probs=33.0
Q ss_pred CCCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCC
Q 043239 147 GGKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPG 184 (286)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~ 184 (286)
.|+++.|.| .|.||+.+|+.|...|++|++.+|+.+..
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~ 40 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ 40 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccc
Confidence 578899997 58999999999999999999999876653
No 426
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.43 E-value=0.021 Score=50.99 Aligned_cols=63 Identities=16% Similarity=0.153 Sum_probs=48.2
Q ss_pred CCCCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCC----------------CCc-------ccccCHHHhhcCCC
Q 043239 146 LGGKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPG----------------VSY-------PFYANVSGLAADSD 201 (286)
Q Consensus 146 l~g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~----------------~~~-------~~~~~l~e~l~~aD 201 (286)
+.+++|.|.| .|.||+.+++.|...|++|++.+|+.... ... ....++.++++++|
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 102 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD 102 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence 5688999999 59999999999999999999999865432 111 11234567788999
Q ss_pred EEEEecc
Q 043239 202 VLIVCCA 208 (286)
Q Consensus 202 iV~~~lp 208 (286)
+|+.+..
T Consensus 103 ~Vih~A~ 109 (351)
T 3ruf_A 103 HVLHQAA 109 (351)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9987764
No 427
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=95.41 E-value=0.011 Score=53.67 Aligned_cols=83 Identities=13% Similarity=0.055 Sum_probs=49.5
Q ss_pred CEEEEEc-CChHHHHHHHHhccCC---CEEEEEC-CCCC-CCC---Ccc-cccCHH-HhhcCCCEEEEeccCChhhhhcc
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVPFG---CSIAYTS-RKKK-PGV---SYP-FYANVS-GLAADSDVLIVCCALTEETHHMI 217 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~~g---~~V~~~~-r~~~-~~~---~~~-~~~~l~-e~l~~aDiV~~~lp~~~~t~~~i 217 (286)
++|+|+| +|.+|+.+.+.|...+ +++.... ++.. +.. +.. ...+++ +.+.++|+|+.|+|... +....
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~~~vDvVf~a~g~~~-s~~~a 82 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGEL-SAKWA 82 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCGGGCSEEEECSCHHH-HHHHH
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCChHHhcCCCEEEECCCchH-HHHHH
Confidence 6899999 9999999999998763 4665443 3221 110 100 111111 24578999999988432 22221
Q ss_pred cHHHHhcCCCCcEEEEcCC
Q 043239 218 NKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 218 ~~~~l~~mk~g~ilvn~sr 236 (286)
.. +++.|+.+||.|.
T Consensus 83 -~~---~~~~G~~vId~s~ 97 (336)
T 2r00_A 83 -PI---AAEAGVVVIDNTS 97 (336)
T ss_dssp -HH---HHHTTCEEEECSS
T ss_pred -HH---HHHcCCEEEEcCC
Confidence 12 2356788888763
No 428
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.40 E-value=0.0097 Score=54.02 Aligned_cols=29 Identities=28% Similarity=0.366 Sum_probs=24.0
Q ss_pred CEEEEEcCChHHHHHHHHhccC---CCEEEEE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF---GCSIAYT 177 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~---g~~V~~~ 177 (286)
.+|||+|+|.||+.+.|.|... .++|.+.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivai 32 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAI 32 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEE
Confidence 3799999999999999998765 4687644
No 429
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=95.40 E-value=0.035 Score=50.08 Aligned_cols=61 Identities=20% Similarity=0.147 Sum_probs=45.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHhccCCC-------EEEEECCC----CCCC-----------CC----cccccCHHHhhcCC
Q 043239 148 GKRVGIVGL-GSIGSEVAKRLVPFGC-------SIAYTSRK----KKPG-----------VS----YPFYANVSGLAADS 200 (286)
Q Consensus 148 g~~vgIiG~-G~iG~~~A~~l~~~g~-------~V~~~~r~----~~~~-----------~~----~~~~~~l~e~l~~a 200 (286)
.++|+|+|. |.+|..++..|...|+ +|..+|+. .++. .. .....++.+.+++|
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a 84 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA 84 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence 468999997 9999999999987775 78899987 2111 01 11235788999999
Q ss_pred CEEEEecc
Q 043239 201 DVLIVCCA 208 (286)
Q Consensus 201 DiV~~~lp 208 (286)
|+|+.+..
T Consensus 85 D~Vi~~ag 92 (329)
T 1b8p_A 85 DVALLVGA 92 (329)
T ss_dssp SEEEECCC
T ss_pred CEEEEeCC
Confidence 99988754
No 430
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=95.36 E-value=0.02 Score=51.15 Aligned_cols=109 Identities=15% Similarity=0.267 Sum_probs=63.5
Q ss_pred CEEEEEc-CChHHHHHHHHhccCCC--EEEEECC--CCCCCCC--------------cccccCHHHhhcCCCEEEEeccC
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVPFGC--SIAYTSR--KKKPGVS--------------YPFYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~~g~--~V~~~~r--~~~~~~~--------------~~~~~~l~e~l~~aDiV~~~lp~ 209 (286)
++|+|+| .|.+|..++..|...|. ++..+|+ ..++..+ .....+..+.+++||+|+++...
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~ 80 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCC
Confidence 4899999 99999999999987665 6888888 4422110 00000225678999999988653
Q ss_pred Chh---hh-hc------ccHHH---HhcCCCCcEEEEcCCCcccCHHHHHHH--HHhCCeeEE
Q 043239 210 TEE---TH-HM------INKDV---MTALGKEGVIINVGRGALIDEKELVHF--LVRGSLVEL 257 (286)
Q Consensus 210 ~~~---t~-~~------i~~~~---l~~mk~g~ilvn~srg~~vd~~al~~a--l~~~~i~ga 257 (286)
... ++ .+ +-++. +....+.+++++.+..-=+....+.+. +...++.|.
T Consensus 81 ~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 81 PRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHHHHHHSSSCGGGEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHcCCCHHHeeec
Confidence 221 10 00 11122 223367889998754433333444343 344456555
No 431
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.35 E-value=0.01 Score=51.48 Aligned_cols=61 Identities=20% Similarity=0.112 Sum_probs=45.7
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Ccc----cccCHHHhhcCCCEEEEeccCC
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYP----FYANVSGLAADSDVLIVCCALT 210 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~----~~~~l~e~l~~aDiV~~~lp~~ 210 (286)
.++|.|.|.|.+|+.+++.|.+.|++|.+.+|+..... +.. -..+++ +.++|+|+.+....
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPD 74 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCB
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCcc
Confidence 37899999999999999999999999999998765321 111 112333 77899998876543
No 432
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=95.34 E-value=0.014 Score=53.10 Aligned_cols=29 Identities=28% Similarity=0.454 Sum_probs=24.1
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEEEEE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSIAYT 177 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V~~~ 177 (286)
.+|||+|+|.||+.+.|.|... .++|.+.
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivai 31 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAV 31 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEE
Confidence 3799999999999999998875 4677644
No 433
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.31 E-value=0.02 Score=55.91 Aligned_cols=38 Identities=21% Similarity=0.549 Sum_probs=33.8
Q ss_pred ccCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCC
Q 043239 144 STLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKK 181 (286)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~ 181 (286)
..|++++|.|||+|.+|..+|+.|...|. +++++|...
T Consensus 322 ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 322 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 36899999999999999999999999998 788888644
No 434
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=95.30 E-value=0.014 Score=48.30 Aligned_cols=62 Identities=19% Similarity=0.185 Sum_probs=44.6
Q ss_pred CCCEEEEEc-CChHHHHHHHHhccCCC--EEEEECCCCCCCC-Ccc-cccC------HHHhhcCCCEEEEeccCC
Q 043239 147 GGKRVGIVG-LGSIGSEVAKRLVPFGC--SIAYTSRKKKPGV-SYP-FYAN------VSGLAADSDVLIVCCALT 210 (286)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~-~~~-~~~~------l~e~l~~aDiV~~~lp~~ 210 (286)
.+++|.|.| .|.+|+.+++.|...|. +|.+.+|+..... ... ...+ +.+++ +|+|+.+....
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~ 76 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTT 76 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHhh--hcEEEECeeec
Confidence 467999998 79999999999999998 9999988765421 111 1122 33334 89998887654
No 435
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=95.30 E-value=0.023 Score=50.59 Aligned_cols=66 Identities=26% Similarity=0.205 Sum_probs=45.8
Q ss_pred ccCCCCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCC-------CCcc-------cccCHHHhhcC--CCEEEEe
Q 043239 144 STLGGKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPG-------VSYP-------FYANVSGLAAD--SDVLIVC 206 (286)
Q Consensus 144 ~~l~g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-------~~~~-------~~~~l~e~l~~--aDiV~~~ 206 (286)
..+.+++|.|.| .|.||+.+++.|...|++|++.+|+.... .... ...++++++++ +|+|+.+
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~ 96 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHT 96 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEEC
Confidence 347789999998 69999999999999999999998865321 1111 11235566777 9999877
Q ss_pred ccC
Q 043239 207 CAL 209 (286)
Q Consensus 207 lp~ 209 (286)
...
T Consensus 97 A~~ 99 (333)
T 2q1w_A 97 AAS 99 (333)
T ss_dssp CCC
T ss_pred cee
Confidence 543
No 436
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.30 E-value=0.025 Score=51.70 Aligned_cols=85 Identities=21% Similarity=0.235 Sum_probs=60.4
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC-----Cccc-------ccCHHHhhc-----CCCEEEEecc
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV-----SYPF-------YANVSGLAA-----DSDVLIVCCA 208 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~-----~~~~-------~~~l~e~l~-----~aDiV~~~lp 208 (286)
.|.+|.|+|.|.+|...++.++..|+ +|++.+++.++.. +... ..++.+.+. ..|+|+-++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 57899999999999999999999999 8999998776532 2211 123333332 4899998876
Q ss_pred CChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 043239 209 LTEETHHMINKDVMTALGKE-GVIINVGR 236 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~mk~g-~ilvn~sr 236 (286)
.. ++ -...+..++++ ..++.++-
T Consensus 273 ~~-~~----~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 273 NV-SV----MRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp CH-HH----HHHHHHTBCTTTCEEEECSC
T ss_pred CH-HH----HHHHHHHhhccCCEEEEEcc
Confidence 32 21 24567788986 88888763
No 437
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.28 E-value=0.01 Score=53.47 Aligned_cols=79 Identities=10% Similarity=0.020 Sum_probs=54.0
Q ss_pred CCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC----Ccc-------cccCHHHh-hcCCCEEEEeccCChhhhh
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV----SYP-------FYANVSGL-AADSDVLIVCCALTEETHH 215 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----~~~-------~~~~l~e~-l~~aDiV~~~lp~~~~t~~ 215 (286)
.+++.|+|+|.+|+.+++.|...|. |++.+++++... +.. ....++++ +++||.++++++..+. .
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~--n 191 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE--T 191 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHH--H
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHH--H
Confidence 5689999999999999999999999 999998775432 111 11234444 7889999998875432 2
Q ss_pred cccHHHHhcCCCCc
Q 043239 216 MINKDVMTALGKEG 229 (286)
Q Consensus 216 ~i~~~~l~~mk~g~ 229 (286)
+.-......+.+..
T Consensus 192 ~~~~~~ar~~~~~~ 205 (336)
T 1lnq_A 192 IHCILGIRKIDESV 205 (336)
T ss_dssp HHHHHHHHTTCTTS
T ss_pred HHHHHHHHHHCCCC
Confidence 33334555566653
No 438
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.28 E-value=0.018 Score=53.26 Aligned_cols=87 Identities=15% Similarity=0.198 Sum_probs=59.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC-----Cccc-----ccCHHH----hh--cCCCEEEEecc
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV-----SYPF-----YANVSG----LA--ADSDVLIVCCA 208 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~-----~~~~-----~~~l~e----~l--~~aDiV~~~lp 208 (286)
-.|.+|.|+|.|.+|...++.++.+|+ +|++.+++.++.. +... ..++.+ +. ...|+|+-++.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCC
Confidence 358899999999999999999999999 8999987765421 2111 123332 22 25899999876
Q ss_pred CChhhhhcccHHHHhcC----CCCcEEEEcCC
Q 043239 209 LTEETHHMINKDVMTAL----GKEGVIINVGR 236 (286)
Q Consensus 209 ~~~~t~~~i~~~~l~~m----k~g~ilvn~sr 236 (286)
....+. ...++.+ +++..++.++-
T Consensus 292 ~~~~~~----~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 292 VPQLVW----PQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CHHHHH----HHHHHHHHHCSCCCCEEEECSC
T ss_pred CcHHHH----HHHHHHHHhccCCCcEEEEeCC
Confidence 432222 2233344 89998888863
No 439
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=95.28 E-value=0.018 Score=49.55 Aligned_cols=61 Identities=18% Similarity=0.234 Sum_probs=46.5
Q ss_pred CEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCC--C-------cccccCHHHhhcCCCEEEEeccC
Q 043239 149 KRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGV--S-------YPFYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 149 ~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~--~-------~~~~~~l~e~l~~aDiV~~~lp~ 209 (286)
++|.|.|. |.||+.+++.|...|++|++.+|+..... + .....++.++++..|+|+.+...
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 73 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGV 73 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence 58999996 99999999999999999999998765321 1 11123456788899999887643
No 440
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.26 E-value=0.028 Score=51.14 Aligned_cols=63 Identities=22% Similarity=0.247 Sum_probs=48.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCC-----Ccc-------cccCHHHhhcCCCEEEEecc
Q 043239 146 LGGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYP-------FYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 146 l~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~-------~~~~l~e~l~~aDiV~~~lp 208 (286)
..+++|.|.|. |.||+.+++.|...|++|++.+|+..... ... ...++.++++.+|+|+.+..
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~ 102 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA 102 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECce
Confidence 36789999997 99999999999999999999988765432 111 12345677889999987754
No 441
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=95.26 E-value=0.023 Score=48.08 Aligned_cols=60 Identities=18% Similarity=0.215 Sum_probs=43.7
Q ss_pred CEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCCCcc-----cccCHHHhhc----CCCEEEEecc
Q 043239 149 KRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYP-----FYANVSGLAA----DSDVLIVCCA 208 (286)
Q Consensus 149 ~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~l~e~l~----~aDiV~~~lp 208 (286)
+++.|.|. |.||+.+++.|...|++|++.+|+.+...... ...+++++++ ..|+|+.+..
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag 71 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAG 71 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCC
Confidence 47888985 99999999999999999999998765432111 1233445554 7899988754
No 442
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.25 E-value=0.0035 Score=51.85 Aligned_cols=85 Identities=21% Similarity=0.274 Sum_probs=57.6
Q ss_pred CCCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCC-----CCccc-----ccCHHH----hh--cCCCEEEEeccC
Q 043239 147 GGKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPG-----VSYPF-----YANVSG----LA--ADSDVLIVCCAL 209 (286)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~-----~~~~~-----~~~l~e----~l--~~aDiV~~~lp~ 209 (286)
.|++|.|+| .|.+|..+++.++..|++|++.+++.++. .+... ..+..+ .. ...|+++.+..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g- 116 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA- 116 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC-
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc-
Confidence 578999999 69999999999999999999988765432 11110 012212 22 14788887763
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 043239 210 TEETHHMINKDVMTALGKEGVIINVGRG 237 (286)
Q Consensus 210 ~~~t~~~i~~~~l~~mk~g~ilvn~srg 237 (286)
. . .....+..|+++..+|+++..
T Consensus 117 ~-~----~~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 117 G-E----AIQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp T-H----HHHHHHHTEEEEEEEEECSCG
T ss_pred h-H----HHHHHHHHhccCCEEEEEcCC
Confidence 1 1 124567788888888888754
No 443
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.23 E-value=0.012 Score=52.09 Aligned_cols=83 Identities=12% Similarity=0.207 Sum_probs=59.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cccc---c---cCHHHhhcCCCEEEEeccCChhhh
Q 043239 147 GGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPF---Y---ANVSGLAADSDVLIVCCALTEETH 214 (286)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~---~---~~l~e~l~~aDiV~~~lp~~~~t~ 214 (286)
.|++|.|+|. |.+|..+++.++..|++|++.+++.++.. +... . .++.+.+...|+|+. +.. +
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~--- 199 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-K--- 199 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-T---
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-H---
Confidence 4789999998 99999999999999999999988765532 2221 1 123333467899988 653 1
Q ss_pred hcccHHHHhcCCCCcEEEEcCC
Q 043239 215 HMINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~ilvn~sr 236 (286)
.-...++.|+++..++.++.
T Consensus 200 --~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 200 --EVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp --THHHHHTTEEEEEEEEEC--
T ss_pred --HHHHHHHhhccCCEEEEEeC
Confidence 12567788889888888863
No 444
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=95.23 E-value=0.073 Score=46.10 Aligned_cols=50 Identities=20% Similarity=0.383 Sum_probs=37.7
Q ss_pred CEEEEEcC-ChHHHHHHHHhccC-CCEEE-EECCCCCCCCCcccccCHHHhhc-CCCEEEEecc
Q 043239 149 KRVGIVGL-GSIGSEVAKRLVPF-GCSIA-YTSRKKKPGVSYPFYANVSGLAA-DSDVLIVCCA 208 (286)
Q Consensus 149 ~~vgIiG~-G~iG~~~A~~l~~~-g~~V~-~~~r~~~~~~~~~~~~~l~e~l~-~aDiV~~~lp 208 (286)
++|+|+|+ |.||+.+++.+... ++++. ++++. .++++++. .+|+|+-+.+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~----------~dl~~~~~~~~DvvIDfT~ 54 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG----------DPLSLLTDGNTEVVIDFTH 54 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT----------CCTHHHHHTTCCEEEECSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC----------CCHHHHhccCCcEEEEccC
Confidence 47999995 99999999998755 88876 55553 35666665 7998885543
No 445
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.23 E-value=0.032 Score=52.50 Aligned_cols=105 Identities=15% Similarity=0.197 Sum_probs=70.7
Q ss_pred cccCCCCEEEEEcCChHHHHHHHHhccCCCEEE-EECCCCC----------------------CC---------CCcccc
Q 043239 143 GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIA-YTSRKKK----------------------PG---------VSYPFY 190 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~-~~~r~~~----------------------~~---------~~~~~~ 190 (286)
+.++.|+||.|-|+|++|...|+.|...|.+|+ +.|.+.. .. .+.. .
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~-~ 312 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAK-Y 312 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCE-E
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCce-E
Confidence 457899999999999999999999999999975 5553310 00 0111 1
Q ss_pred cCHHHhh-cCCCEEEEeccCChhhhhcccHHHHhcCC--CCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 191 ANVSGLA-ADSDVLIVCCALTEETHHMINKDVMTALG--KEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 191 ~~l~e~l-~~aDiV~~~lp~~~~t~~~i~~~~l~~mk--~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
.+.++++ ..|||++=|. +.+.|+.+..+.+. .=.+++-.+.+.+..+. .+.|.+++|.
T Consensus 313 v~~~~i~~~~~DI~iPcA-----~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA--~~iL~~rGI~ 373 (456)
T 3r3j_A 313 FENQKPWNIPCDIAFPCA-----TQNEINENDADLFIQNKCKMIVEGANMPTHIKA--LHKLKQNNII 373 (456)
T ss_dssp ECSCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHHTCCEEECCSSSCBCTTH--HHHHHTTTCE
T ss_pred eCCccccccCccEEEeCC-----CccchhhHHHHHHHhcCCeEEEecCCCCCCHHH--HHHHHHCCCE
Confidence 1223333 4599887764 46688888777762 23477788888865443 4678777774
No 446
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.22 E-value=0.015 Score=49.06 Aligned_cols=64 Identities=16% Similarity=0.039 Sum_probs=47.9
Q ss_pred CCCCEEEEEc-CChHHHHHHHHhccC--CCEEEEECCCCCCC----CC-------cccccCHHHhhcCCCEEEEeccC
Q 043239 146 LGGKRVGIVG-LGSIGSEVAKRLVPF--GCSIAYTSRKKKPG----VS-------YPFYANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 146 l~g~~vgIiG-~G~iG~~~A~~l~~~--g~~V~~~~r~~~~~----~~-------~~~~~~l~e~l~~aDiV~~~lp~ 209 (286)
..+++|.|.| .|.||+.+++.|... |++|.+.+|+..+. .. .....++.+++++.|+|+.+...
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 3578999998 699999999999998 89999998865321 11 11224566788899999887653
No 447
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=95.22 E-value=0.058 Score=47.53 Aligned_cols=42 Identities=24% Similarity=0.218 Sum_probs=36.1
Q ss_pred CCcccCCCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCC
Q 043239 141 PLGSTLGGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKK 182 (286)
Q Consensus 141 ~~~~~l~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~ 182 (286)
.+..++.||++.|.|. |.||.++|+.|...|++|++.+|+..
T Consensus 21 ~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~ 63 (299)
T 3t7c_A 21 SMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQ 63 (299)
T ss_dssp -CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred ccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccc
Confidence 4556799999999985 68999999999999999999988754
No 448
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=95.22 E-value=0.023 Score=49.95 Aligned_cols=61 Identities=20% Similarity=0.254 Sum_probs=39.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCC----CcccccCHHHhhcC--CCEEEEecc
Q 043239 148 GKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGV----SYPFYANVSGLAAD--SDVLIVCCA 208 (286)
Q Consensus 148 g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----~~~~~~~l~e~l~~--aDiV~~~lp 208 (286)
+++|.|.|. |.||+.+++.|...|++|.+.+|+..... ......++.++++. +|+|+.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 69 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAA 69 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence 579999996 99999999999999999999997654311 11123455666764 899987754
No 449
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.20 E-value=0.057 Score=51.30 Aligned_cols=106 Identities=18% Similarity=0.168 Sum_probs=71.1
Q ss_pred cCCCCEEEEEcCCh----------HHHHHHHHhccCCCEEEEECCCCCCCC----------------CcccccCHHHhhc
Q 043239 145 TLGGKRVGIVGLGS----------IGSEVAKRLVPFGCSIAYTSRKKKPGV----------------SYPFYANVSGLAA 198 (286)
Q Consensus 145 ~l~g~~vgIiG~G~----------iG~~~A~~l~~~g~~V~~~~r~~~~~~----------------~~~~~~~l~e~l~ 198 (286)
.+.|++|+|+|+-- -...+++.|...|.+|.+||+...... ......++.+.++
T Consensus 325 ~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (478)
T 2y0c_A 325 DLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAAR 404 (478)
T ss_dssp CCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHTTTCHHHHTTEEECSSHHHHTT
T ss_pred cCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHHHHHhhccccccccccccceeecCCHHHHHh
Confidence 57899999999753 678899999999999999999753210 1223457888999
Q ss_pred CCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEE
Q 043239 199 DSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELV 258 (286)
Q Consensus 199 ~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~ 258 (286)
++|+|+++..- ++-+.+--+...+.|+. .+|+|. |+ +.+.+ .+++..+...+
T Consensus 405 ~ad~~vi~t~~-~~f~~~~~~~~~~~~~~-~~i~D~-r~-~~~~~----~~~~~g~~y~~ 456 (478)
T 2y0c_A 405 DADALVIVTEW-KIFKSPDFVALGRLWKT-PVIFDG-RN-LYEPE----TMSEQGIEYHP 456 (478)
T ss_dssp TCSEEEECSCC-GGGGSCCHHHHHTTCSS-CEEEES-SC-CSCHH----HHHHTTCEEEC
T ss_pred CCCEEEEecCC-hHhhccCHHHHHhhcCC-CEEEEC-CC-CCCHH----HHHhcCCEEEE
Confidence 99999998763 33333222334455654 789998 44 34544 33444554443
No 450
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.18 E-value=0.029 Score=54.70 Aligned_cols=37 Identities=22% Similarity=0.563 Sum_probs=33.2
Q ss_pred ccCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCC
Q 043239 144 STLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRK 180 (286)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~ 180 (286)
..|.+++|.|||+|.+|..+|+.|...|. ++.++|..
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 56899999999999999999999999998 78888643
No 451
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.16 E-value=0.027 Score=50.00 Aligned_cols=61 Identities=15% Similarity=0.165 Sum_probs=45.3
Q ss_pred CCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCC-----Ccc-------cccCHHHhhcCCCEEEEecc
Q 043239 148 GKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYP-------FYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 148 g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~-------~~~~l~e~l~~aDiV~~~lp 208 (286)
.++|.|.| .|.||+.+++.|...|++|.+.+|+..... +.. ...++.++++.+|+|+.+..
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 35899999 599999999999999999999988765421 111 12345677889999987764
No 452
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=95.11 E-value=0.0076 Score=53.79 Aligned_cols=96 Identities=21% Similarity=0.209 Sum_probs=58.2
Q ss_pred CEEEEEcCChHHHHHHHHhccCCC--EEEEECCCCCCCC-------------Cc--c-cccCHHHhhcCCCEEEEecc--
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPFGC--SIAYTSRKKKPGV-------------SY--P-FYANVSGLAADSDVLIVCCA-- 208 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~g~--~V~~~~r~~~~~~-------------~~--~-~~~~l~e~l~~aDiV~~~lp-- 208 (286)
++|+|||.|.+|+++|..|...+. ++..+|....... .. . ...+-.+.+++||+|+++.-
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~p 80 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCC
Confidence 589999999999999998876554 7999998653221 00 0 11222357899999998753
Q ss_pred CChh-hhh-cc--cH----H---HHhcCCCCcEEEEcCCCcccCHHHHH
Q 043239 209 LTEE-THH-MI--NK----D---VMTALGKEGVIINVGRGALIDEKELV 246 (286)
Q Consensus 209 ~~~~-t~~-~i--~~----~---~l~~mk~g~ilvn~srg~~vd~~al~ 246 (286)
-.|. ++. ++ |. + .+..-.|.++++.++ .++|.-..+
T Consensus 81 rkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs--NPvd~~t~i 127 (294)
T 2x0j_A 81 RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMTYI 127 (294)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec--CcchhhHHh
Confidence 2221 111 11 11 1 222336778888885 445554444
No 453
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=95.10 E-value=0.021 Score=51.78 Aligned_cols=84 Identities=13% Similarity=0.129 Sum_probs=51.4
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEEEE-ECC-C-CC---------CCCC-c--------------------ccccCHH
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSIAY-TSR-K-KK---------PGVS-Y--------------------PFYANVS 194 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V~~-~~r-~-~~---------~~~~-~--------------------~~~~~l~ 194 (286)
.+|||+|+|.||+.+++.+... +++|.+ .++ . .+ ...+ + ....+++
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~ 83 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHH
Confidence 4899999999999999998753 578764 443 1 11 0000 0 0012555
Q ss_pred Hh-h--cCCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 043239 195 GL-A--ADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRG 237 (286)
Q Consensus 195 e~-l--~~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg 237 (286)
++ + .++|+|+.|+|..... +..-.+++.|+..|+++-.
T Consensus 84 ~l~~~~~~vDvV~eatg~~~~~-----e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 84 KIKWGDAGAEYVVESTGVFTTM-----EKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp GCCTTTTTCCEEEECSSSCCSH-----HHHGGGGGGTCSEEEESSC
T ss_pred HCccccCCCCEEEECCCchhhH-----HHHHHHHhCCCeEEEeccC
Confidence 65 2 5799999998854221 1233446678766777644
No 454
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.10 E-value=0.0082 Score=54.60 Aligned_cols=85 Identities=25% Similarity=0.303 Sum_probs=60.1
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCC------CCccc---ccC---HHHhhcCCCEEEEeccCChhhh
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPG------VSYPF---YAN---VSGLAADSDVLIVCCALTEETH 214 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~------~~~~~---~~~---l~e~l~~aDiV~~~lp~~~~t~ 214 (286)
.|.+|.|+|.|.+|...++.++.+|.+|++.+++.++. .+... ..+ +.++....|+|+-++....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~--- 256 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHH--- 256 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChH---
Confidence 57899999999999999999999999999988876531 12211 122 2233346899998876321
Q ss_pred hcccHHHHhcCCCCcEEEEcCC
Q 043239 215 HMINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~ilvn~sr 236 (286)
.-...++.++++..++.++.
T Consensus 257 --~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 257 --ALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp --CSHHHHTTEEEEEEEEECSC
T ss_pred --HHHHHHHHhccCCEEEEeCC
Confidence 12456777888888888863
No 455
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=95.07 E-value=0.028 Score=52.08 Aligned_cols=65 Identities=18% Similarity=0.316 Sum_probs=44.8
Q ss_pred CCCcccCCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC----C--cc---cc---cCHHHhhcCCCEEEE
Q 043239 140 YPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV----S--YP---FY---ANVSGLAADSDVLIV 205 (286)
Q Consensus 140 ~~~~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----~--~~---~~---~~l~e~l~~aDiV~~ 205 (286)
|.++....+++|+|+|-|..|+.+++.++.+|++|.+++ +..... . .. .+ ..+.++++.+|+|+.
T Consensus 16 ~~~~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 16 YFQGHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp -----CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred eEeccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 445666778999999999999999999999999998888 443211 1 11 11 235567888998764
No 456
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=95.05 E-value=0.034 Score=50.64 Aligned_cols=82 Identities=15% Similarity=0.229 Sum_probs=50.1
Q ss_pred CEEEEEc-CChHHHHHHHHhccCC-CEEEEEC--CCCC-CCC----Cc----------c--ccc--CHHHhhcCCCEEEE
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVPFG-CSIAYTS--RKKK-PGV----SY----------P--FYA--NVSGLAADSDVLIV 205 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~~g-~~V~~~~--r~~~-~~~----~~----------~--~~~--~l~e~l~~aDiV~~ 205 (286)
.+|||+| +|.+|+.+.+.|.... +++.... ++.. ... +. . .+. +.++ +.++|+|+.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vDvVf~ 83 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVDVVLS 83 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCSEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCCEEEE
Confidence 5899999 8999999999998764 4776553 2211 100 00 0 111 3333 478999999
Q ss_pred eccCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 043239 206 CCALTEETHHMINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 206 ~lp~~~~t~~~i~~~~l~~mk~g~ilvn~sr 236 (286)
|+|... +..+. ... ++.|..+||.+.
T Consensus 84 atp~~~-s~~~a-~~~---~~aG~~VId~s~ 109 (350)
T 2ep5_A 84 ALPNEL-AESIE-LEL---VKNGKIVVSNAS 109 (350)
T ss_dssp CCCHHH-HHHHH-HHH---HHTTCEEEECSS
T ss_pred CCChHH-HHHHH-HHH---HHCCCEEEECCc
Confidence 998432 22221 222 356888999874
No 457
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=95.05 E-value=0.012 Score=55.57 Aligned_cols=104 Identities=15% Similarity=0.236 Sum_probs=64.4
Q ss_pred CCEEEEEcCChHHHHHHHHhcc----------CCCEEE-EECCCCCCCC----CcccccCHHHhhc--CCCEEEEeccCC
Q 043239 148 GKRVGIVGLGSIGSEVAKRLVP----------FGCSIA-YTSRKKKPGV----SYPFYANVSGLAA--DSDVLIVCCALT 210 (286)
Q Consensus 148 g~~vgIiG~G~iG~~~A~~l~~----------~g~~V~-~~~r~~~~~~----~~~~~~~l~e~l~--~aDiV~~~lp~~ 210 (286)
..+|||+|+|.||+.+++.+.. .+.+|. +++++..+.. +...+.+++++++ +.|+|+.++|..
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~tp~~ 89 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELIGGL 89 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECCCSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcCCCc
Confidence 3589999999999999987653 355654 5677654321 2344678999986 479999999853
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHhCCee
Q 043239 211 EETHHMINKDVMTALGKEGVIINVGRGAL-IDEKELVHFLVRGSLV 255 (286)
Q Consensus 211 ~~t~~~i~~~~l~~mk~g~ilvn~srg~~-vd~~al~~al~~~~i~ 255 (286)
.....+ ....|+.|.-++-.--+-. -..+.|.++.++.+..
T Consensus 90 ~~h~~~----~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~ 131 (444)
T 3mtj_A 90 EPAREL----VMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVM 131 (444)
T ss_dssp TTHHHH----HHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHH----HHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCe
Confidence 222222 2334556655554322211 2346777777766554
No 458
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.04 E-value=0.012 Score=53.16 Aligned_cols=85 Identities=20% Similarity=0.140 Sum_probs=59.3
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC---C-ccc-----ccCHHHhhc-----CCCEEEEeccCCh
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV---S-YPF-----YANVSGLAA-----DSDVLIVCCALTE 211 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~---~-~~~-----~~~l~e~l~-----~aDiV~~~lp~~~ 211 (286)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++.++.. . ... ..++.+.+. ..|+|+-++...+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~ 243 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEA 243 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEECCCCHH
Confidence 68899999999999999999999999 8999988754311 1 110 123433332 5899998876322
Q ss_pred hhhhcccHHHHhcCCCCcEEEEcCC
Q 043239 212 ETHHMINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 212 ~t~~~i~~~~l~~mk~g~ilvn~sr 236 (286)
. -+..++.|+++..++.++.
T Consensus 244 ~-----~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 244 A-----IHQGLMALIPGGEARILGI 263 (343)
T ss_dssp H-----HHHHHHHEEEEEEEEECCC
T ss_pred H-----HHHHHHHHhcCCEEEEEec
Confidence 1 1456677888888888764
No 459
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=95.00 E-value=0.043 Score=48.27 Aligned_cols=62 Identities=21% Similarity=0.188 Sum_probs=46.8
Q ss_pred CCCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhc--CCCEEEEeccCC
Q 043239 147 GGKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAA--DSDVLIVCCALT 210 (286)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~--~aDiV~~~lp~~ 210 (286)
.+++|.|.| .|.||+.+++.|...|++|++.+|+... ......++.++++ .+|+|+.+....
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~~--D~~d~~~~~~~~~~~~~d~vih~a~~~ 66 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDEL--NLLDSRAVHDFFASERIDQVYLAAAKV 66 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTC--CTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCccC--CccCHHHHHHHHHhcCCCEEEEcCeec
Confidence 357899999 5999999999999999999988775321 2222345667787 899998776543
No 460
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=95.00 E-value=0.031 Score=49.21 Aligned_cols=63 Identities=24% Similarity=0.262 Sum_probs=44.4
Q ss_pred CCCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCC-C-------cccccCHHHhhcC--CCEEEEeccC
Q 043239 147 GGKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-S-------YPFYANVSGLAAD--SDVLIVCCAL 209 (286)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-~-------~~~~~~l~e~l~~--aDiV~~~lp~ 209 (286)
..++|.|.| .|.||+.+++.|...|++|++.+|+..... . .....++.++++. .|+|+.+...
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 84 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAK 84 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSC
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 356888887 699999999999999999999988765411 1 1112345566765 8999887654
No 461
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=95.00 E-value=0.083 Score=46.45 Aligned_cols=37 Identities=19% Similarity=0.219 Sum_probs=33.2
Q ss_pred ccCCCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCC
Q 043239 144 STLGGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRK 180 (286)
Q Consensus 144 ~~l~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~ 180 (286)
.++.||++.|.|. |.||..+|+.|...|++|++.+++
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCG
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999985 789999999999999999998876
No 462
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=94.99 E-value=0.026 Score=50.63 Aligned_cols=60 Identities=25% Similarity=0.416 Sum_probs=43.0
Q ss_pred CEEEEEcCChHHHHHHHHhcc--CCCEE-EEECCCCCC-C------CCcc-cccCHHHhhc-----CCCEEEEecc
Q 043239 149 KRVGIVGLGSIGSEVAKRLVP--FGCSI-AYTSRKKKP-G------VSYP-FYANVSGLAA-----DSDVLIVCCA 208 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~--~g~~V-~~~~r~~~~-~------~~~~-~~~~l~e~l~-----~aDiV~~~lp 208 (286)
.+|||||+|.||+.+++.+.. -+.++ .+.++++++ . .+.. ...+.+++++ +.|+|+.++|
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp 80 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATS 80 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCC
Confidence 589999999999999999844 35665 467877655 1 1222 1345677754 5799999998
No 463
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=94.96 E-value=0.11 Score=45.71 Aligned_cols=108 Identities=15% Similarity=0.139 Sum_probs=72.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCC--CCCcccccCHHHhhcCCCEEEEeccCChh----------h
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKP--GVSYPFYANVSGLAADSDVLIVCCALTEE----------T 213 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~--~~~~~~~~~l~e~l~~aDiV~~~lp~~~~----------t 213 (286)
+.|++|.|+|.-..-..+++.|...|++|.+...+... ..+.....++.+.++++|+|++..|.... .
T Consensus 3 ~~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~~~~~~~ 82 (293)
T 3d4o_A 3 LTGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWNTVDAILLPISGTNEAGKVDTIFSNE 82 (293)
T ss_dssp CTTCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGGGCSEEECCTTCCCTTCBCCBSSCSC
T ss_pred ccCcEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHhcCCEEEeccccccCCceeecccccC
Confidence 67889999999999999999999999999876543221 12223345677788999998864332110 1
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCeeEEE
Q 043239 214 HHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLVELV 258 (286)
Q Consensus 214 ~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ga~ 258 (286)
...++++.++.+++..++. + + +|..++.+++.+.+|...-
T Consensus 83 ~~~~~~~~l~~~~~l~~i~-~---G-~d~id~~~~~~~~gi~v~~ 122 (293)
T 3d4o_A 83 SIVLTEEMIEKTPNHCVVY-S---G-ISNTYLNQCMKKTNRTLVK 122 (293)
T ss_dssp CCBCCHHHHHTSCTTCEEE-E---S-SCCHHHHHHHHHHTCEEEE
T ss_pred CccchHHHHHhCCCCCEEE-e---c-CCCHHHHHHHHHcCCeEEE
Confidence 1236788999998877765 3 2 3666666666666665443
No 464
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=94.96 E-value=0.02 Score=49.67 Aligned_cols=38 Identities=24% Similarity=0.413 Sum_probs=33.3
Q ss_pred cCCCCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCC
Q 043239 145 TLGGKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKK 182 (286)
Q Consensus 145 ~l~g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~ 182 (286)
++.|+++.|.| .|.||+.+|+.|.+.|++|++.+|+.+
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~ 41 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREER 41 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36789999998 478999999999999999999988753
No 465
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.94 E-value=0.0083 Score=54.02 Aligned_cols=84 Identities=14% Similarity=0.178 Sum_probs=57.9
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cccc-----ccCHHHhh----cCCCEEEEeccCChh
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPF-----YANVSGLA----ADSDVLIVCCALTEE 212 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~-----~~~l~e~l----~~aDiV~~~lp~~~~ 212 (286)
.|.+|.|+|.|.+|...++.++..|.+|++.+++.++.. +... ..++.+.+ ...|+|+.+....+.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~~ 245 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKA 245 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHHH
Confidence 578999999999999999999999999999988765421 2111 12333322 257888887652211
Q ss_pred hhhcccHHHHhcCCCCcEEEEcC
Q 043239 213 THHMINKDVMTALGKEGVIINVG 235 (286)
Q Consensus 213 t~~~i~~~~l~~mk~g~ilvn~s 235 (286)
-...++.++++..++.++
T Consensus 246 -----~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 246 -----FSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp -----HHHHHHHEEEEEEEEECS
T ss_pred -----HHHHHHHhccCCEEEEeC
Confidence 134566778888877775
No 466
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=94.93 E-value=0.034 Score=49.79 Aligned_cols=65 Identities=18% Similarity=0.180 Sum_probs=48.8
Q ss_pred cCCCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCC----------------CCc-------ccccCHHHhhcCC
Q 043239 145 TLGGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPG----------------VSY-------PFYANVSGLAADS 200 (286)
Q Consensus 145 ~l~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~----------------~~~-------~~~~~l~e~l~~a 200 (286)
++.+++|.|.|. |.||+.+++.|...|++|++.+|+.... ... ....++.++++.+
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 367889999997 9999999999999999999998865321 111 1123456778899
Q ss_pred CEEEEeccC
Q 043239 201 DVLIVCCAL 209 (286)
Q Consensus 201 DiV~~~lp~ 209 (286)
|+|+.+...
T Consensus 104 d~vih~A~~ 112 (352)
T 1sb8_A 104 DYVLHQAAL 112 (352)
T ss_dssp SEEEECCSC
T ss_pred CEEEECCcc
Confidence 999887653
No 467
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=94.93 E-value=0.048 Score=50.84 Aligned_cols=90 Identities=11% Similarity=0.166 Sum_probs=66.6
Q ss_pred CCCCEEEEEc-----CCh---HHHHHHHHhccCCCEEEEECCCCCC-CC-------------C--cccccCHHHhhcCCC
Q 043239 146 LGGKRVGIVG-----LGS---IGSEVAKRLVPFGCSIAYTSRKKKP-GV-------------S--YPFYANVSGLAADSD 201 (286)
Q Consensus 146 l~g~~vgIiG-----~G~---iG~~~A~~l~~~g~~V~~~~r~~~~-~~-------------~--~~~~~~l~e~l~~aD 201 (286)
+.|.+|+|+| +|. +..+++..+..+|++|.+..+..-. .. + +....+++|+++++|
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~eav~~AD 265 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAEAFKDAD 265 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHHHHTTCS
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhcCCC
Confidence 7899999997 354 9999999999999999998875432 11 1 233578999999999
Q ss_pred EEEEeccCC----------------h-------------h--hhhcccHHHHhcCCC-CcEEEEcC
Q 043239 202 VLIVCCALT----------------E-------------E--THHMINKDVMTALGK-EGVIINVG 235 (286)
Q Consensus 202 iV~~~lp~~----------------~-------------~--t~~~i~~~~l~~mk~-g~ilvn~s 235 (286)
+|.+-+=.. + + ....++.+.++.+|+ +++|.-+.
T Consensus 266 VVytd~W~sm~~Q~ER~~~~~~g~~~~~~~~~~~~~~~~~~~~~y~vt~elm~~ak~~dai~MHcL 331 (418)
T 2yfk_A 266 VVYPKSWAPFAAMEKRTELYGNGDQAGIDQLEQELLSQNKKHKDWECTEELMKTTKDGKALYMHCL 331 (418)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHGGGTTCCBCHHHHHTSGGGCCEECCCS
T ss_pred EEEEccccchhHHHHHhhhhccccchhhhhhhhhhhhHHHHHhhcCCCHHHHHhcCCCCeEEECCC
Confidence 998842100 0 0 123568889999986 89998885
No 468
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=94.92 E-value=0.02 Score=53.94 Aligned_cols=105 Identities=12% Similarity=0.219 Sum_probs=64.4
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEEE-EECCCCCCCC-------C----------------------cccccCHHHhh
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSIA-YTSRKKKPGV-------S----------------------YPFYANVSGLA 197 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V~-~~~r~~~~~~-------~----------------------~~~~~~l~e~l 197 (286)
.+|||||+|.||+.+++.+... +++|. ++|++.++.. + ...+.+.++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 4899999999999999988754 66764 6787764321 1 12357899998
Q ss_pred c--CCCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCC-cccCHHHHHHHHHhCCeeEE
Q 043239 198 A--DSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRG-ALIDEKELVHFLVRGSLVEL 257 (286)
Q Consensus 198 ~--~aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg-~~vd~~al~~al~~~~i~ga 257 (286)
+ +.|+|+.++|.. .... +-.+..|+.|.-++...-+ .......|.++.++.++...
T Consensus 104 ~d~dIDaVviaTp~p-~~H~---e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvvl~ 162 (446)
T 3upl_A 104 SNPLIDVIIDATGIP-EVGA---ETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYS 162 (446)
T ss_dssp TCTTCCEEEECSCCH-HHHH---HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred cCCCCCEEEEcCCCh-HHHH---HHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCeee
Confidence 7 489999998743 2111 1223334555444422111 12234567776666555433
No 469
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=94.91 E-value=0.058 Score=47.34 Aligned_cols=60 Identities=20% Similarity=0.176 Sum_probs=43.8
Q ss_pred CCEEEEEc-CChHHHHHHHHhccCCCEEEEECC-CCCC---C------C-----------CcccccCHHHhhcCCCEEEE
Q 043239 148 GKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSR-KKKP---G------V-----------SYPFYANVSGLAADSDVLIV 205 (286)
Q Consensus 148 g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r-~~~~---~------~-----------~~~~~~~l~e~l~~aDiV~~ 205 (286)
|++|.|.| .|.||+.+++.|...|++|.+..| +... . . ......+++++++.+|+|+.
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 57899999 699999999999999999998877 4321 0 0 01112456678889999987
Q ss_pred ec
Q 043239 206 CC 207 (286)
Q Consensus 206 ~l 207 (286)
+.
T Consensus 81 ~A 82 (322)
T 2p4h_X 81 TA 82 (322)
T ss_dssp CC
T ss_pred cC
Confidence 65
No 470
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.90 E-value=0.025 Score=51.67 Aligned_cols=38 Identities=29% Similarity=0.431 Sum_probs=33.3
Q ss_pred ccCCCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCC
Q 043239 144 STLGGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKK 181 (286)
Q Consensus 144 ~~l~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~ 181 (286)
..|.+++|.|+|+|.+|..+|+.|...|. ++.++|+..
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 45889999999999999999999999898 788887643
No 471
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=94.89 E-value=0.039 Score=47.77 Aligned_cols=91 Identities=15% Similarity=0.254 Sum_probs=59.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCCC-----cc-------cccCHH---HhhcCCCEEEEeccC
Q 043239 146 LGGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGVS-----YP-------FYANVS---GLAADSDVLIVCCAL 209 (286)
Q Consensus 146 l~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~-----~~-------~~~~l~---e~l~~aDiV~~~lp~ 209 (286)
++||++.|-|. +-||+++|++|...|++|.+.+|+.+.... .. ...+++ +-+..-|+++++.-.
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi 88 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGI 88 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence 58999999985 569999999999999999999988765321 00 011222 335678999887543
Q ss_pred Chhhhh------------------cccHHHHhcCC-CCcEEEEcCC
Q 043239 210 TEETHH------------------MINKDVMTALG-KEGVIINVGR 236 (286)
Q Consensus 210 ~~~t~~------------------~i~~~~l~~mk-~g~ilvn~sr 236 (286)
...... ++.+..+++|+ .+..|||++.
T Consensus 89 ~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS 134 (242)
T 4b79_A 89 SRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIAS 134 (242)
T ss_dssp CCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECC
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEee
Confidence 222111 11133455664 4678899974
No 472
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=94.89 E-value=0.039 Score=50.09 Aligned_cols=28 Identities=21% Similarity=0.287 Sum_probs=22.9
Q ss_pred CEEEEEcCChHHHHHHHHhccC---CCEEEE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF---GCSIAY 176 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~---g~~V~~ 176 (286)
.+|||+|+|.||+.+.|.|... .++|.+
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eiva 32 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVV 32 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEE
Confidence 3799999999999999998765 346654
No 473
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.88 E-value=0.025 Score=51.21 Aligned_cols=85 Identities=18% Similarity=0.248 Sum_probs=59.6
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC-----Cccc---cc-----CHH-Hhh----cCCCEEEEec
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV-----SYPF---YA-----NVS-GLA----ADSDVLIVCC 207 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~-----~~~~---~~-----~l~-e~l----~~aDiV~~~l 207 (286)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++.++.. +... .. ++. ++. ...|+|+-++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 47899999999999999999999999 8999887765321 2211 11 111 121 3589999887
Q ss_pred cCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 043239 208 ALTEETHHMINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 208 p~~~~t~~~i~~~~l~~mk~g~ilvn~sr 236 (286)
... .+ -...+..++++..++.++.
T Consensus 251 g~~-~~----~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 251 GAE-AS----IQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp CCH-HH----HHHHHHHSCTTCEEEECSC
T ss_pred CCh-HH----HHHHHHHhcCCCEEEEEec
Confidence 632 11 1456788999999998874
No 474
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=94.87 E-value=0.049 Score=47.34 Aligned_cols=60 Identities=17% Similarity=0.185 Sum_probs=44.4
Q ss_pred CEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCC-CcccccCHHHhhcC--CCEEEEeccC
Q 043239 149 KRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGV-SYPFYANVSGLAAD--SDVLIVCCAL 209 (286)
Q Consensus 149 ~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-~~~~~~~l~e~l~~--aDiV~~~lp~ 209 (286)
|+|.|.|. |.+|+.+++.|. .|++|.+.+|+..... ......++.+++++ +|+|+.+...
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~ 64 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAH 64 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccccccccCCCHHHHHHHHHhcCCCEEEECccc
Confidence 47899986 999999999999 7999999998763221 12223456677776 9999877543
No 475
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=94.85 E-value=0.027 Score=49.29 Aligned_cols=58 Identities=24% Similarity=0.279 Sum_probs=42.8
Q ss_pred CEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhcCCCEEEEec
Q 043239 149 KRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADSDVLIVCC 207 (286)
Q Consensus 149 ~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~~aDiV~~~l 207 (286)
|+|.|.|. |-||+.+++.|.+.|++|++..|++.+.. ........+.++++|.|+-+.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~-~~~~~~~~~~l~~~d~vihla 59 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGR-ITWDELAASGLPSCDAAVNLA 59 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE-EEHHHHHHHCCCSCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe-eecchhhHhhccCCCEEEEec
Confidence 58999996 99999999999999999999998765431 111111234578899887654
No 476
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=94.83 E-value=0.018 Score=49.95 Aligned_cols=60 Identities=15% Similarity=0.173 Sum_probs=45.3
Q ss_pred CEEEEEcC-ChHHHHHHHHhccC--CCEEEEECCCCCCCC-----Cc-------ccccCHHHhhcCCCEEEEecc
Q 043239 149 KRVGIVGL-GSIGSEVAKRLVPF--GCSIAYTSRKKKPGV-----SY-------PFYANVSGLAADSDVLIVCCA 208 (286)
Q Consensus 149 ~~vgIiG~-G~iG~~~A~~l~~~--g~~V~~~~r~~~~~~-----~~-------~~~~~l~e~l~~aDiV~~~lp 208 (286)
|+|.|.|. |.+|+.+++.|... |++|.+.+|+..+.. +. ....++.++++++|+|+.+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 46888886 99999999999998 999999988765431 11 112356678889999987754
No 477
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=94.82 E-value=0.054 Score=48.74 Aligned_cols=39 Identities=18% Similarity=0.264 Sum_probs=34.2
Q ss_pred ccCCCCEEEEEc-CChHHHHHHHHhcc--CCCEEEEECCCCC
Q 043239 144 STLGGKRVGIVG-LGSIGSEVAKRLVP--FGCSIAYTSRKKK 182 (286)
Q Consensus 144 ~~l~g~~vgIiG-~G~iG~~~A~~l~~--~g~~V~~~~r~~~ 182 (286)
.++.+++|.|.| .|.||+.+++.|.. .|++|++.+|+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~ 47 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS 47 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence 357899999996 59999999999999 8999999988654
No 478
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.80 E-value=0.016 Score=52.72 Aligned_cols=84 Identities=17% Similarity=0.161 Sum_probs=59.0
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cccc-----ccCHHH----hhc--CCCEEEEeccCC
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPF-----YANVSG----LAA--DSDVLIVCCALT 210 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~-----~~~l~e----~l~--~aDiV~~~lp~~ 210 (286)
.|++|.|+|.|.+|...++.++..|++|++.+++.++.. +... ..++.+ +.. ..|+|+-++. .
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g-~ 267 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAG-G 267 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETT-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-h
Confidence 588999999999999999999999999999988754321 2111 123332 222 5899988875 2
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCC
Q 043239 211 EETHHMINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 211 ~~t~~~i~~~~l~~mk~g~ilvn~sr 236 (286)
+ .-...+..++++..++.++.
T Consensus 268 ~-----~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 268 A-----GLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp S-----CHHHHHHHEEEEEEEEEECC
T ss_pred H-----HHHHHHHHhhcCCEEEEEec
Confidence 1 12456777888888888763
No 479
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=94.78 E-value=0.069 Score=47.35 Aligned_cols=60 Identities=20% Similarity=0.193 Sum_probs=44.8
Q ss_pred CCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCC------------Cc-------ccccCHHHhhcCCCEEEEec
Q 043239 148 GKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------------SY-------PFYANVSGLAADSDVLIVCC 207 (286)
Q Consensus 148 g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------------~~-------~~~~~l~e~l~~aDiV~~~l 207 (286)
+++|.|.| .|.||+.+++.|...|++|.+..|+..... .. ....++.++++.+|+|+.+.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 88 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA 88 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence 68999999 799999999999999999988766543211 11 11245667888999987654
No 480
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=94.78 E-value=0.0089 Score=52.18 Aligned_cols=42 Identities=21% Similarity=0.275 Sum_probs=34.9
Q ss_pred CCcccCCCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCC
Q 043239 141 PLGSTLGGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKK 182 (286)
Q Consensus 141 ~~~~~l~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~ 182 (286)
.+...+.||++.|.|. |.||+.+|+.|...|++|++.+|+.+
T Consensus 21 ~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 63 (270)
T 3ftp_A 21 SMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEA 63 (270)
T ss_dssp --CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3556789999999985 78999999999999999999988643
No 481
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=94.77 E-value=0.087 Score=50.08 Aligned_cols=101 Identities=16% Similarity=0.291 Sum_probs=69.7
Q ss_pred cCCCCEEEEEcCChHHHHHHHHhccCCCEEEEE-CCCCCC--CCC---------------------cccccCHHHhh-cC
Q 043239 145 TLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYT-SRKKKP--GVS---------------------YPFYANVSGLA-AD 199 (286)
Q Consensus 145 ~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~-~r~~~~--~~~---------------------~~~~~~l~e~l-~~ 199 (286)
++.|++|.|-|+|++|+..|+.|...|.+|+.. |.+..- ..+ .....+ +++ ..
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~~--~il~~~ 318 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEG--SILEVD 318 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEECS--CGGGSC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeecc--cccccc
Confidence 589999999999999999999999999998764 322110 000 001111 333 46
Q ss_pred CCEEEEeccCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 200 SDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 200 aDiV~~~lp~~~~t~~~i~~~~l~~mk~g~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
|||++=|. +.+.|+.+..+.++ -.+|+-.+.+.+ ..++ .+.|.+++|.
T Consensus 319 ~DIliPcA-----~~n~I~~~na~~l~-akiV~EgAN~p~-T~eA-~~iL~~rGIl 366 (501)
T 3mw9_A 319 CDILIPAA-----SEKQLTKSNAPRVK-AKIIAEGANGPT-TPEA-DKIFLERNIM 366 (501)
T ss_dssp CSEEEECS-----SSCCBCTTTGGGCC-CSEEECCSSSCB-CHHH-HHHHHHTTCE
T ss_pred ceEEeecc-----ccCccCHhHHHHcC-ceEEEeCCCCcC-CHHH-HHHHHHCCCE
Confidence 99887764 46788888888886 357888888874 4444 4677777774
No 482
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=94.77 E-value=0.052 Score=49.40 Aligned_cols=81 Identities=17% Similarity=0.150 Sum_probs=49.1
Q ss_pred CEEEEEcCChHHHHHHHHhccC-CCEEEEE-CCCCCCC------C------Cc--------------ccccCHHHhhcCC
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF-GCSIAYT-SRKKKPG------V------SY--------------PFYANVSGLAADS 200 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~-g~~V~~~-~r~~~~~------~------~~--------------~~~~~l~e~l~~a 200 (286)
.+|||+|+|.||+.+++.|... +++|.+. +++.+.. . .+ ....+.++++.++
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 82 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDA 82 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCC
Confidence 4899999999999999998765 5776654 3321110 0 00 0011334455789
Q ss_pred CEEEEeccCChhhhhcccHHH-HhcCCCCcEEEEc
Q 043239 201 DVLIVCCALTEETHHMINKDV-MTALGKEGVIINV 234 (286)
Q Consensus 201 DiV~~~lp~~~~t~~~i~~~~-l~~mk~g~ilvn~ 234 (286)
|+|+.|+|...... .. -.+++.|..+|..
T Consensus 83 DiV~eatg~~~s~~-----~a~~~~l~aG~~VI~s 112 (343)
T 2yyy_A 83 DIVVDGAPKKIGKQ-----NLENIYKPHKVKAILQ 112 (343)
T ss_dssp SEEEECCCTTHHHH-----HHHHTTTTTTCEEEEC
T ss_pred CEEEECCCccccHH-----HHHHHHHHCCCEEEEC
Confidence 99999987542111 11 2456777766654
No 483
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.76 E-value=0.017 Score=52.80 Aligned_cols=85 Identities=24% Similarity=0.314 Sum_probs=59.6
Q ss_pred CCCEEEEEcCChHHHHHHHHhccCCC-EEEEECCCCCCCC-----Cccc-----ccCHHHhhc--------CCCEEEEec
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPFGC-SIAYTSRKKKPGV-----SYPF-----YANVSGLAA--------DSDVLIVCC 207 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~g~-~V~~~~r~~~~~~-----~~~~-----~~~l~e~l~--------~aDiV~~~l 207 (286)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++.++.. +... ..++.+.+. ..|+|+-++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 47899999999999999999999999 8998887765421 2211 134444433 379998886
Q ss_pred cCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 043239 208 ALTEETHHMINKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 208 p~~~~t~~~i~~~~l~~mk~g~ilvn~sr 236 (286)
.. +.+ -...+..++++..++.++.
T Consensus 262 G~-~~~----~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 262 GV-AET----VKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp CC-HHH----HHHHHHHEEEEEEEEECSC
T ss_pred CC-HHH----HHHHHHHhccCCEEEEEec
Confidence 52 221 2356677888888888763
No 484
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=94.70 E-value=0.025 Score=51.56 Aligned_cols=84 Identities=13% Similarity=0.216 Sum_probs=50.0
Q ss_pred CCEEEEEc-CChHHHHHHHHhccCCC---EEEEE-CCCCC-CCCCc---c-cccCH-HHhhcCCCEEEEeccCChhhhhc
Q 043239 148 GKRVGIVG-LGSIGSEVAKRLVPFGC---SIAYT-SRKKK-PGVSY---P-FYANV-SGLAADSDVLIVCCALTEETHHM 216 (286)
Q Consensus 148 g~~vgIiG-~G~iG~~~A~~l~~~g~---~V~~~-~r~~~-~~~~~---~-~~~~l-~e~l~~aDiV~~~lp~~~~t~~~ 216 (286)
|.+|+|+| .|..|+.+.+.|....+ ++... +++.. +...+ . .+.++ .+.++++|+|+.|+|... +...
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~-s~~~ 79 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAGSAM-SKVQ 79 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEETTEEEEEEETTTSCCTTCSEEEECSCHHH-HHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeecCCceEEEeCCHHHhccCCEEEECCChHH-HHHH
Confidence 56899999 89999999999988643 44443 33221 11000 0 11111 134578999999998432 2222
Q ss_pred ccHHHHhcCCCCcEEEEcCC
Q 043239 217 INKDVMTALGKEGVIINVGR 236 (286)
Q Consensus 217 i~~~~l~~mk~g~ilvn~sr 236 (286)
. .. .++.|+.+||.|.
T Consensus 80 a-~~---~~~~G~~vID~Sa 95 (344)
T 3tz6_A 80 A-PR---FAAAGVTVIDNSS 95 (344)
T ss_dssp H-HH---HHHTTCEEEECSS
T ss_pred H-HH---HHhCCCEEEECCC
Confidence 1 12 2356888888874
No 485
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=94.70 E-value=0.032 Score=51.08 Aligned_cols=62 Identities=15% Similarity=0.203 Sum_probs=40.0
Q ss_pred CEEEEEcCChHHHHHHHHhccC--C--CEEE-EECCCCCCC--C--CcccccCHHHhhcCC-------------------
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF--G--CSIA-YTSRKKKPG--V--SYPFYANVSGLAADS------------------- 200 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~--g--~~V~-~~~r~~~~~--~--~~~~~~~l~e~l~~a------------------- 200 (286)
.+|||||+|.||+.+++.+... | ++|. +++++.... . +...+.++++++.+.
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~~~~~~~ 84 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTSPK 84 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHTTCSS
T ss_pred EEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhhhccccCCCCccccHHHHHhcccCCCCCHHHHHHHhhhccC
Confidence 4899999999999999999875 3 4654 455433211 1 222224566666443
Q ss_pred -CEEEEeccCC
Q 043239 201 -DVLIVCCALT 210 (286)
Q Consensus 201 -DiV~~~lp~~ 210 (286)
|+|+.|+|..
T Consensus 85 ~DvVV~~t~~~ 95 (358)
T 1ebf_A 85 PVILVDNTSSA 95 (358)
T ss_dssp CEEEEECSCCH
T ss_pred CcEEEEcCCCh
Confidence 7888888754
No 486
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=94.69 E-value=0.059 Score=48.38 Aligned_cols=35 Identities=29% Similarity=0.298 Sum_probs=29.3
Q ss_pred CCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCC
Q 043239 148 GKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKK 182 (286)
Q Consensus 148 g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~ 182 (286)
+++|.|.| .|.||+.+++.|...|++|++.+|+..
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 36 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRAS 36 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 46899998 599999999999999999999988754
No 487
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.69 E-value=0.017 Score=52.12 Aligned_cols=83 Identities=17% Similarity=0.246 Sum_probs=57.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHhccCCCEEEEECCCCCCCC-----Cccc----ccCHHHh----hc--CCCEEEEeccCC
Q 043239 147 GGKRVGIVGL-GSIGSEVAKRLVPFGCSIAYTSRKKKPGV-----SYPF----YANVSGL----AA--DSDVLIVCCALT 210 (286)
Q Consensus 147 ~g~~vgIiG~-G~iG~~~A~~l~~~g~~V~~~~r~~~~~~-----~~~~----~~~l~e~----l~--~aDiV~~~lp~~ 210 (286)
.|++|.|+|. |.+|..+++.++.+|++|++.+++.++.. +... ..++.+. .. ..|+|+.++...
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~~ 238 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGP 238 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCchh
Confidence 5889999998 99999999999999999999888765432 1111 1233322 21 488888877531
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcC
Q 043239 211 EETHHMINKDVMTALGKEGVIINVG 235 (286)
Q Consensus 211 ~~t~~~i~~~~l~~mk~g~ilvn~s 235 (286)
.-...+..++++..++.++
T Consensus 239 ------~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 239 ------AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ------CHHHHHHTEEEEEEEEEC-
T ss_pred ------HHHHHHHhhcCCCEEEEEE
Confidence 2245677888888888876
No 488
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=94.68 E-value=0.041 Score=47.63 Aligned_cols=58 Identities=24% Similarity=0.351 Sum_probs=44.5
Q ss_pred CEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhc--CCCEEEEeccC
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAA--DSDVLIVCCAL 209 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~--~aDiV~~~lp~ 209 (286)
++|.|.| .|.||+.+++.|...|++|++.+|.... .....++.++++ .+|+|+.+...
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~D---~~d~~~~~~~~~~~~~d~vi~~a~~ 66 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLD---ITNISQVQQVVQEIRPHIIIHCAAY 66 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTTSC---TTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEecccccC---CCCHHHHHHHHHhcCCCEEEECCcc
Confidence 3899999 5999999999999999999999984322 222345667777 59999876543
No 489
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=94.67 E-value=0.049 Score=47.05 Aligned_cols=38 Identities=37% Similarity=0.517 Sum_probs=34.1
Q ss_pred cCCCCEEEEEcCC---hHHHHHHHHhccCCCEEEEECCCCC
Q 043239 145 TLGGKRVGIVGLG---SIGSEVAKRLVPFGCSIAYTSRKKK 182 (286)
Q Consensus 145 ~l~g~~vgIiG~G---~iG~~~A~~l~~~g~~V~~~~r~~~ 182 (286)
+|+||++.|-|.+ -||.++|+.|...|++|++.+|+.+
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~ 43 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKER 43 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHH
Confidence 6899999999974 5999999999999999999988754
No 490
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=94.65 E-value=0.038 Score=49.55 Aligned_cols=63 Identities=17% Similarity=0.151 Sum_probs=46.5
Q ss_pred CCCCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCC----------Ccc-------cccCHHHhhcC--CCEEEE
Q 043239 146 LGGKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGV----------SYP-------FYANVSGLAAD--SDVLIV 205 (286)
Q Consensus 146 l~g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~----------~~~-------~~~~l~e~l~~--aDiV~~ 205 (286)
+.+++|.|.| .|.||+.+++.|...|++|.+.+|+..... ... ...++.++++. .|+|+.
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 86 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH 86 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence 5688999999 699999999999999999999988765421 111 11234556665 799987
Q ss_pred ecc
Q 043239 206 CCA 208 (286)
Q Consensus 206 ~lp 208 (286)
+..
T Consensus 87 ~A~ 89 (357)
T 1rkx_A 87 MAA 89 (357)
T ss_dssp CCS
T ss_pred CCC
Confidence 754
No 491
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=94.62 E-value=0.036 Score=47.29 Aligned_cols=92 Identities=18% Similarity=0.219 Sum_probs=57.3
Q ss_pred CEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCCC-c----ccccCHHHhhcCC----CEEEEeccCCh---hhhh
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGVS-Y----PFYANVSGLAADS----DVLIVCCALTE---ETHH 215 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~-~----~~~~~l~e~l~~a----DiV~~~lp~~~---~t~~ 215 (286)
|++.|.| .|.||+.+|+.|...|++|++.+|+.+.... . ....++++++++. |+++.+.-... ....
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~ 81 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGN 81 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCCCcccHHH
Confidence 4677777 5789999999999999999999887654321 1 1123445566554 99988754332 0010
Q ss_pred c----------ccHHHHhcCCC--CcEEEEcCCCccc
Q 043239 216 M----------INKDVMTALGK--EGVIINVGRGALI 240 (286)
Q Consensus 216 ~----------i~~~~l~~mk~--g~ilvn~srg~~v 240 (286)
. +.+..++.|++ ...||++|.....
T Consensus 82 ~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 118 (257)
T 1fjh_A 82 VVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA 118 (257)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred HHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence 1 12334555533 2678999876544
No 492
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=94.57 E-value=0.058 Score=46.77 Aligned_cols=60 Identities=22% Similarity=0.270 Sum_probs=45.4
Q ss_pred CCCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCCCcccccCHHHhhc--CCCEEEEeccC
Q 043239 147 GGKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAA--DSDVLIVCCAL 209 (286)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~~~~~~~~l~e~l~--~aDiV~~~lp~ 209 (286)
..++|.|.| .|.||+.+++.|...|++|++.+|+... .....++.++++ .+|+|+.+...
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~D---l~d~~~~~~~~~~~~~d~vih~A~~ 73 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLD---ITNVLAVNKFFNEKKPNVVINCAAH 73 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCC---TTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCccCC---CCCHHHHHHHHHhcCCCEEEECCcc
Confidence 456888887 5999999999999999999999986321 222345667777 69999877653
No 493
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.57 E-value=0.063 Score=50.76 Aligned_cols=106 Identities=8% Similarity=0.090 Sum_probs=68.5
Q ss_pred cccCCCCEEEEEcCChHHHHHHHHhccCCCEEE-EECCCC-----CCC----------------CCcc---------ccc
Q 043239 143 GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIA-YTSRKK-----KPG----------------VSYP---------FYA 191 (286)
Q Consensus 143 ~~~l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~-~~~r~~-----~~~----------------~~~~---------~~~ 191 (286)
|.++.|++|.|-|+|++|...|+.|...|.+|+ +.|.+. +-. .... ...
T Consensus 247 G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v 326 (470)
T 2bma_A 247 NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYF 326 (470)
T ss_dssp TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEEC
T ss_pred cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEe
Confidence 557899999999999999999999999999987 444321 000 0000 001
Q ss_pred CHHHhh-cCCCEEEEeccCChhhhhcccHHHHhcC-CCC-cEEEEcCCCcccCHHHHHHHHHhCCee
Q 043239 192 NVSGLA-ADSDVLIVCCALTEETHHMINKDVMTAL-GKE-GVIINVGRGALIDEKELVHFLVRGSLV 255 (286)
Q Consensus 192 ~l~e~l-~~aDiV~~~lp~~~~t~~~i~~~~l~~m-k~g-~ilvn~srg~~vd~~al~~al~~~~i~ 255 (286)
+.++++ ..|||++=|. +.+.|+.+..+.+ +++ .+|+--+.+.+ ..++ .+.|.+++|.
T Consensus 327 ~~~~~~~~~~DI~iPcA-----~~~~I~~~na~~l~~~~ak~V~EgAN~p~-T~eA-~~~L~~rGIl 386 (470)
T 2bma_A 327 PNEKPWGVPCTLAFPCA-----TQNDVDLDQAKLLQKNGCILVGEGANMPS-TVDA-INLFKSNNII 386 (470)
T ss_dssp SSCCTTSSCCSEEEECS-----STTCBCSHHHHHHHHTTCCEEECCSSSCB-CHHH-HHHHHHTTCE
T ss_pred cCcCeeecCccEEEecc-----ccCcCCHHHHHHHHhcCcEEEEeCCCCCC-CHHH-HHHHHHCCcE
Confidence 112222 3689887764 4567777766666 223 36677777775 4444 6778888775
No 494
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.56 E-value=0.016 Score=52.23 Aligned_cols=84 Identities=23% Similarity=0.274 Sum_probs=57.7
Q ss_pred CCCEEEEEcCChHHHHHHHHhccC--CCEEEEECCCCCCCC-----CcccccCH-------HHhhc--CCCEEEEeccCC
Q 043239 147 GGKRVGIVGLGSIGSEVAKRLVPF--GCSIAYTSRKKKPGV-----SYPFYANV-------SGLAA--DSDVLIVCCALT 210 (286)
Q Consensus 147 ~g~~vgIiG~G~iG~~~A~~l~~~--g~~V~~~~r~~~~~~-----~~~~~~~l-------~e~l~--~aDiV~~~lp~~ 210 (286)
.|.+|.|+|.|.+|...++.++.+ |++|++.+++.++.. +....-+. +++-. ..|+|+-++...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~ 249 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTE 249 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCCh
Confidence 578999999999999999999998 999999998765422 22211111 12221 579999887632
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcC
Q 043239 211 EETHHMINKDVMTALGKEGVIINVG 235 (286)
Q Consensus 211 ~~t~~~i~~~~l~~mk~g~ilvn~s 235 (286)
.. -...++.++++..++.++
T Consensus 250 ~~-----~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 250 ET-----TYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp HH-----HHHHHHHEEEEEEEEECC
T ss_pred HH-----HHHHHHHhhcCCEEEEeC
Confidence 11 135567778888777775
No 495
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=94.53 E-value=0.089 Score=47.19 Aligned_cols=95 Identities=14% Similarity=0.235 Sum_probs=60.0
Q ss_pred CEEEEEc-CChHHHHHHHHhcc---CCCEEEEECCCCCCCC---------Cc--ccc----cCHHHhhcCCCEEEEeccC
Q 043239 149 KRVGIVG-LGSIGSEVAKRLVP---FGCSIAYTSRKKKPGV---------SY--PFY----ANVSGLAADSDVLIVCCAL 209 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~~l~~---~g~~V~~~~r~~~~~~---------~~--~~~----~~l~e~l~~aDiV~~~lp~ 209 (286)
++|+|+| .|.+|.+++..|.. +..++..+|.... .. .. ... .+..+.+++||+|+++.+.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~-~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~ 79 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV 79 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTT-HHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCC-chhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCC
Confidence 5899999 89999999999875 3358899998762 11 11 111 2456789999999998653
Q ss_pred Chh---hh-hcc--c----HH---HHhcCCCCcEEEEcCCCcccCHHHHH
Q 043239 210 TEE---TH-HMI--N----KD---VMTALGKEGVIINVGRGALIDEKELV 246 (286)
Q Consensus 210 ~~~---t~-~~i--~----~~---~l~~mk~g~ilvn~srg~~vd~~al~ 246 (286)
... ++ .++ | ++ .+....|.+++++++ .++|.-..+
T Consensus 80 ~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd~~t~~ 127 (312)
T 3hhp_A 80 ARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT--NPVNTTVAI 127 (312)
T ss_dssp SCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec--CcchhHHHH
Confidence 211 11 111 1 11 122236788999995 556655544
No 496
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=94.51 E-value=0.022 Score=51.82 Aligned_cols=29 Identities=24% Similarity=0.321 Sum_probs=23.8
Q ss_pred CEEEEEcCChHHHHHHHHhccC---CCEEEEE
Q 043239 149 KRVGIVGLGSIGSEVAKRLVPF---GCSIAYT 177 (286)
Q Consensus 149 ~~vgIiG~G~iG~~~A~~l~~~---g~~V~~~ 177 (286)
.+|||+|+|.||+.+.+.|... +++|.+.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaI 34 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAI 34 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEE
Confidence 4899999999999999998765 3676543
No 497
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=94.49 E-value=0.072 Score=48.88 Aligned_cols=82 Identities=13% Similarity=0.168 Sum_probs=48.1
Q ss_pred CEEEEEc-CChHHHHHHH-HhccCCC---EEEEEC-CCCCCCC----C--cc--cccCHHHhhcCCCEEEEeccCChhhh
Q 043239 149 KRVGIVG-LGSIGSEVAK-RLVPFGC---SIAYTS-RKKKPGV----S--YP--FYANVSGLAADSDVLIVCCALTEETH 214 (286)
Q Consensus 149 ~~vgIiG-~G~iG~~~A~-~l~~~g~---~V~~~~-r~~~~~~----~--~~--~~~~l~e~l~~aDiV~~~lp~~~~t~ 214 (286)
++|||+| +|.+|+.+.+ .|...++ .+..+. ++..+.. + .. ...+.++ ++++|+|+.|+|.. .+.
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~~-~~~~DvVf~a~g~~-~s~ 79 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA-LKALDIIVTCQGGD-YTN 79 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH-HHTCSEEEECSCHH-HHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCccccCCCceEEEecCChHH-hcCCCEEEECCCch-hHH
Confidence 4899999 9999999999 6665543 454433 3221111 1 11 1123444 57999999998833 222
Q ss_pred hcccHHHHhcCCCCc--EEEEcCC
Q 043239 215 HMINKDVMTALGKEG--VIINVGR 236 (286)
Q Consensus 215 ~~i~~~~l~~mk~g~--ilvn~sr 236 (286)
... ... .+.|+ ++||.+.
T Consensus 80 ~~a-~~~---~~~G~k~vVID~ss 99 (367)
T 1t4b_A 80 EIY-PKL---RESGWQGYWIDAAS 99 (367)
T ss_dssp HHH-HHH---HHTTCCCEEEECSS
T ss_pred HHH-HHH---HHCCCCEEEEcCCh
Confidence 221 222 24565 8999864
No 498
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=94.46 E-value=0.071 Score=47.25 Aligned_cols=63 Identities=17% Similarity=0.165 Sum_probs=46.6
Q ss_pred CCCEEEEEc-CChHHHHHHHHhccCCCEEEEECCCCCCCC------------Cc-------ccccCHHHhhc--CCCEEE
Q 043239 147 GGKRVGIVG-LGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------------SY-------PFYANVSGLAA--DSDVLI 204 (286)
Q Consensus 147 ~g~~vgIiG-~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------------~~-------~~~~~l~e~l~--~aDiV~ 204 (286)
.+++|.|.| .|.||+.+++.|...|++|.+.+|+..... .. ....+++++++ ..|+|+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 467999998 699999999999999999999998765432 11 11234556676 799998
Q ss_pred EeccC
Q 043239 205 VCCAL 209 (286)
Q Consensus 205 ~~lp~ 209 (286)
.+...
T Consensus 84 h~A~~ 88 (341)
T 3enk_A 84 HFAAL 88 (341)
T ss_dssp ECCCC
T ss_pred ECccc
Confidence 76543
No 499
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.45 E-value=0.13 Score=47.97 Aligned_cols=109 Identities=13% Similarity=0.127 Sum_probs=69.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHhccCCCEEEEECCCCCCCC------Ccccc--cCHHHhhcCCCEEEEeccC---Chhhh
Q 043239 146 LGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGV------SYPFY--ANVSGLAADSDVLIVCCAL---TEETH 214 (286)
Q Consensus 146 l~g~~vgIiG~G~iG~~~A~~l~~~g~~V~~~~r~~~~~~------~~~~~--~~l~e~l~~aDiV~~~lp~---~~~t~ 214 (286)
+.+++|.|||+|..|.+.|+.|...|++|+++|....... +.... ....+.+..+|.|++.-.. .+...
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~~G~~~~~g~~~~~~~~~~d~vV~s~gi~~~~p~~~ 82 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLS 82 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSCTTSCEEESSCCHHHHHTCSEEEECTTSCTTCHHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhhCCCEEEECCCcHHHhccCCEEEeCCCCCCCCHHHH
Confidence 5788999999999999999999999999999987544321 21111 1124556689998886321 22211
Q ss_pred -------hcccHH-HH-hcCCCCcEEEEcCCCcccCHHHHHHHHHhCCe
Q 043239 215 -------HMINKD-VM-TALGKEGVIINVGRGALIDEKELVHFLVRGSL 254 (286)
Q Consensus 215 -------~~i~~~-~l-~~mk~g~ilvn~srg~~vd~~al~~al~~~~i 254 (286)
.++.+- .+ ..++...+-|-=+.|......-+...|++...
T Consensus 83 ~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~g~ 131 (439)
T 2x5o_A 83 AAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGV 131 (439)
T ss_dssp HHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHHTTC
T ss_pred HHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCC
Confidence 123321 12 22443345555568888777777778877543
No 500
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=94.45 E-value=0.056 Score=48.33 Aligned_cols=61 Identities=16% Similarity=0.119 Sum_probs=45.2
Q ss_pred CCEEEEEc-CChHHHHHHHHhccCC-----CEEEEECCCCCCCC----Ccc-------cccCHHHhhcC---CCEEEEec
Q 043239 148 GKRVGIVG-LGSIGSEVAKRLVPFG-----CSIAYTSRKKKPGV----SYP-------FYANVSGLAAD---SDVLIVCC 207 (286)
Q Consensus 148 g~~vgIiG-~G~iG~~~A~~l~~~g-----~~V~~~~r~~~~~~----~~~-------~~~~l~e~l~~---aDiV~~~l 207 (286)
|++|.|.| .|.||+.+++.|...| ++|++.+|+..... ... ...++.+++++ +|+|+.+.
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a 80 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVT 80 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECC
Confidence 57899998 5999999999999999 99999988765421 111 12245567777 89987764
Q ss_pred c
Q 043239 208 A 208 (286)
Q Consensus 208 p 208 (286)
.
T Consensus 81 ~ 81 (364)
T 2v6g_A 81 W 81 (364)
T ss_dssp C
T ss_pred C
Confidence 3
Done!