BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043241
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9QY93|DCTP1_MOUSE dCTP pyrophosphatase 1 OS=Mus musculus GN=Dctpp1 PE=1 SV=1
Length = 170
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%)
Query: 54 FAMVGEVGELSEIFQWRGEVDKGLPNWEDADKEHLGEELSDVLLYLIRLADICGIDLGDA 113
A+VGEVGEL+E+FQW+ + + G W ++ L EELSDVL+YL+ LA C +DL A
Sbjct: 58 LALVGEVGELAELFQWKSDTEPGPQAWPPKERAALQEELSDVLIYLVALAARCHVDLPQA 117
Query: 114 ATKKIVKNAIKYP 126
K+ N +YP
Sbjct: 118 VISKMDTNRQRYP 130
>sp|Q91VC0|DCTP1_RAT dCTP pyrophosphatase 1 OS=Rattus norvegicus GN=Dctpp1 PE=2 SV=1
Length = 170
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 54 FAMVGEVGELSEIFQWRGEVDKGLPNWEDADKEHLGEELSDVLLYLIRLADICGIDLGDA 113
A+VGEVGEL+E+FQW+ + + G W+ ++ L EELSDVL+YL+ LA C +DL A
Sbjct: 58 LALVGEVGELAELFQWKSDAEPGPQAWQPKERAALQEELSDVLIYLVALAARCHVDLPRA 117
Query: 114 ATKKIVKNAIKYP 126
K+ N +YP
Sbjct: 118 VISKMDTNRQRYP 130
>sp|Q32KY6|DCTP1_BOVIN dCTP pyrophosphatase 1 OS=Bos taurus GN=DCTPP1 PE=2 SV=1
Length = 169
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 54 FAMVGEVGELSEIFQWRGEVDKGLPNWEDADKEHLGEELSDVLLYLIRLADICGIDLGDA 113
A+VGEVGEL+E+FQW+ + + G W ++ L EELSD+L+YL+ LA C +DL A
Sbjct: 57 LALVGEVGELAELFQWKPDEEPGPQAWSPRERAALQEELSDILIYLVALAARCRVDLPQA 116
Query: 114 ATKKIVKNAIKYP 126
K+ N +YP
Sbjct: 117 VLCKMDTNRRRYP 129
>sp|Q9H773|DCTP1_HUMAN dCTP pyrophosphatase 1 OS=Homo sapiens GN=DCTPP1 PE=1 SV=1
Length = 170
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%)
Query: 54 FAMVGEVGELSEIFQWRGEVDKGLPNWEDADKEHLGEELSDVLLYLIRLADICGIDLGDA 113
A+VGEVGEL+E+FQW+ + + G W ++ L EELSDVL+YL+ LA C +DL A
Sbjct: 58 LALVGEVGELAELFQWKTDGEPGPQGWSPRERAALQEELSDVLIYLVALAARCRVDLPLA 117
Query: 114 ATKKIVKNAIKYP 126
K+ N +YP
Sbjct: 118 VLSKMDINRRRYP 130
>sp|Q99JD2|TEKT1_RAT Tektin-1 OS=Rattus norvegicus GN=Tekt1 PE=2 SV=1
Length = 418
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 16 RSIADSEEAKNMREGEEINADERVMDISLKDLSKQLEEFAMVGEVGELSEIFQWRGEVDK 75
RS ++ A++ R EEI E+ S D++K+LE+ L E+ W+ E+D
Sbjct: 31 RSRSERLVAESQRLVEEI---EKTTRKSQSDVNKKLEQ--------RLEEVKFWKKELDD 79
Query: 76 GLPNWEDADKEHLGEELSDVLLYLIRL 102
L EHL E D+L Y IRL
Sbjct: 80 KL--------EHLVNETEDLLTYKIRL 98
>sp|Q5TYP4|CA112_DANRE Uncharacterized protein C1orf112 homolog OS=Danio rerio
GN=si:dkey-97o5.1 PE=2 SV=1
Length = 911
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 17/84 (20%)
Query: 54 FAMVGEVGELSEIFQWRGEVDKGLP------NWEDADKEHLGEELSDVLLYLIRLADIC- 106
++VG++ L +F+ + KGL N+ED E EE+SD++ + L DIC
Sbjct: 165 LSLVGDL--LQGLFKEAYSLQKGLMELLDKINFEDTASE---EEISDIVTVIHSLLDICL 219
Query: 107 -----GIDLGDAATKKIVKNAIKY 125
I L K I+K +IKY
Sbjct: 220 IISRLDIALHANTWKFIIKQSIKY 243
>sp|C7E5V9|FARS_ZEADI (E)-beta-farnesene synthase OS=Zea diploperennis PE=1 SV=1
Length = 533
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 80 WEDADKEHLGEELSDVLLYLIRLADICGIDLG 111
WE++ E L + D LYL++ D CG +LG
Sbjct: 308 WEESAAELLPGYMKDFYLYLLKTIDSCGDELG 339
>sp|P13670|CHB_VIBHA N,N'-diacetylchitobiase OS=Vibrio harveyi GN=chb PE=1 SV=1
Length = 883
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 21/91 (23%)
Query: 22 EEAKNMREG---EEINADERVMDISLKDLSKQLEEFAMV---------GEVGELSEIFQW 69
+EAKN++ G +++NA+++V DLSKQ + FA G V + + +
Sbjct: 536 DEAKNIKLGAGFQDVNAEDKVSWKGTIDLSKQDKPFAQSPQCQTLITDGTVSDFAHLPSH 595
Query: 70 RGE------VDKGLPN---WEDADKEHLGEE 91
E +KG+PN W+D K GE+
Sbjct: 596 FAEEVSKIVAEKGIPNFQAWQDGLKYSDGEK 626
>sp|Q2NM15|FARS_MAIZE (E)-beta-farnesene synthase OS=Zea mays GN=TPS10 PE=1 SV=1
Length = 533
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 80 WEDADKEHLGEELSDVLLYLIRLADICGIDLG 111
WE+ E L + D LYL++ D CG +LG
Sbjct: 308 WEENAAELLPRYMKDFYLYLLKTIDSCGDELG 339
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.135 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,614,457
Number of Sequences: 539616
Number of extensions: 1995163
Number of successful extensions: 4814
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 4801
Number of HSP's gapped (non-prelim): 35
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)