Query 043247
Match_columns 179
No_of_seqs 138 out of 730
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 02:56:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043247.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043247hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01614 PME_inhib pectineste 100.0 1.1E-31 2.4E-36 203.1 16.9 150 27-179 25-178 (178)
2 smart00856 PMEI Plant invertas 100.0 3.7E-30 7.9E-35 189.0 14.3 142 30-174 3-148 (148)
3 PF04043 PMEI: Plant invertase 100.0 1.2E-27 2.6E-32 176.0 14.0 142 30-174 3-152 (152)
4 PLN02484 probable pectinestera 99.9 2.2E-25 4.8E-30 193.9 16.3 145 31-178 73-226 (587)
5 PLN02314 pectinesterase 99.9 3.9E-25 8.4E-30 192.7 16.4 145 31-178 70-233 (586)
6 PLN02468 putative pectinestera 99.9 4.5E-25 9.7E-30 191.4 16.6 143 31-178 64-216 (565)
7 PLN02995 Probable pectinestera 99.9 2E-24 4.3E-29 186.4 15.9 145 31-178 34-190 (539)
8 PLN02313 Pectinesterase/pectin 99.9 6.5E-24 1.4E-28 184.9 16.8 145 31-178 59-219 (587)
9 PLN02301 pectinesterase/pectin 99.9 3.6E-23 7.7E-28 178.6 16.6 144 29-178 48-200 (548)
10 PLN02506 putative pectinestera 99.9 3.1E-23 6.8E-28 178.8 15.4 147 30-178 33-191 (537)
11 PLN02416 probable pectinestera 99.9 5.6E-23 1.2E-27 177.5 16.5 147 30-178 37-191 (541)
12 PLN02217 probable pectinestera 99.9 3.5E-23 7.5E-28 181.4 14.7 144 31-178 53-207 (670)
13 PLN02990 Probable pectinestera 99.9 9.8E-23 2.1E-27 177.0 15.9 142 32-178 54-209 (572)
14 PLN02708 Probable pectinestera 99.9 2E-22 4.3E-27 174.6 16.9 144 30-177 43-194 (553)
15 PLN02745 Putative pectinestera 99.9 1.8E-22 3.8E-27 175.9 15.8 141 31-178 79-231 (596)
16 PLN02713 Probable pectinestera 99.9 1E-22 2.3E-27 176.6 12.9 143 29-177 30-188 (566)
17 PLN02197 pectinesterase 99.9 4.8E-22 1E-26 172.7 15.5 141 30-178 37-190 (588)
18 PLN02698 Probable pectinestera 99.9 4.3E-21 9.4E-26 164.5 13.9 144 28-178 19-176 (497)
19 PLN03043 Probable pectinestera 99.8 4.2E-20 9.1E-25 159.8 12.5 138 36-177 4-156 (538)
20 PLN02201 probable pectinestera 99.7 1.2E-16 2.6E-21 137.4 14.4 128 27-177 22-162 (520)
21 PLN02933 Probable pectinestera 99.7 3.1E-16 6.7E-21 134.9 14.7 115 63-178 50-181 (530)
22 PLN02488 probable pectinestera 99.6 1.4E-14 3.1E-19 123.5 10.7 138 36-178 3-159 (509)
23 PLN02170 probable pectinestera 99.3 1.3E-11 2.9E-16 106.3 9.8 120 43-178 58-184 (529)
24 PLN02916 pectinesterase family 99.0 1.9E-09 4.2E-14 92.6 8.3 80 94-178 57-140 (502)
25 PF07870 DUF1657: Protein of u 80.8 9.3 0.0002 22.6 6.6 44 74-118 4-47 (50)
26 KOG1733 Mitochondrial import i 77.7 18 0.0004 24.2 8.7 58 63-121 17-84 (97)
27 PF07172 GRP: Glycine rich pro 74.5 2.3 5E-05 28.8 1.8 20 1-20 1-20 (95)
28 KOG4841 Dolichol-phosphate man 61.6 7.6 0.00016 25.7 2.1 26 101-127 66-91 (95)
29 PF08285 DPM3: Dolichol-phosph 53.5 7.6 0.00016 26.1 1.2 27 101-128 62-88 (91)
30 PF13956 Ibs_toxin: Toxin Ibs, 52.4 8.8 0.00019 17.7 0.9 12 10-21 5-16 (19)
31 PF02953 zf-Tim10_DDP: Tim10/D 52.2 47 0.001 20.3 4.6 29 93-122 36-64 (66)
32 PF12554 MOZART1: Mitotic-spin 51.1 49 0.0011 19.4 4.3 32 79-113 4-35 (48)
33 PF10510 PIG-S: Phosphatidylin 45.2 2.2E+02 0.0047 25.2 9.2 81 64-148 390-471 (517)
34 PHA00442 host recBCD nuclease 34.5 1.1E+02 0.0023 18.5 3.9 38 73-113 9-50 (59)
35 KOG2459 GPI transamidase compl 34.4 1.8E+02 0.004 25.9 6.8 79 65-148 406-489 (536)
36 TIGR00208 fliS flagellar biosy 30.9 95 0.0021 21.8 3.9 28 59-87 16-43 (124)
37 KOG3470 Beta-tubulin folding c 29.5 1.9E+02 0.0042 19.9 7.4 52 74-126 24-79 (107)
38 PF02203 TarH: Tar ligand bind 27.8 2.3E+02 0.0049 20.2 9.3 61 72-132 84-145 (171)
39 PF10157 DUF2365: Uncharacteri 25.2 2.8E+02 0.006 20.3 5.9 24 100-124 84-107 (149)
40 PF02561 FliS: Flagellar prote 22.8 1.3E+02 0.0028 20.9 3.4 28 59-87 14-41 (122)
41 PLN03207 stomagen; Provisional 22.6 93 0.002 21.2 2.4 15 5-19 9-23 (113)
42 KOG4514 Uncharacterized conser 21.7 3.8E+02 0.0082 20.6 7.5 30 100-130 157-186 (222)
43 PF10516 SHNi-TPR: SHNi-TPR; 20.1 91 0.002 17.1 1.7 17 107-124 15-31 (38)
No 1
>TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
Probab=100.00 E-value=1.1e-31 Score=203.10 Aligned_cols=150 Identities=30% Similarity=0.420 Sum_probs=138.9
Q ss_pred ccchhhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHH
Q 043247 27 TLVQADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCL 106 (179)
Q Consensus 27 ~~~~~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~ 106 (179)
..++...|+.+|++| .||++|+++|+++|++..+ |+++|+.++++.+..+++++..++.++.++.+++..+.+|++|.
T Consensus 25 ~~~~~~~i~~~C~~t-~~~~~C~~~L~~~~~~~~a-d~~~la~~ai~~a~~~~~~~~~~i~~l~~~~~~~~~~~al~~C~ 102 (178)
T TIGR01614 25 LNATQSLIKRICKKT-EYPNFCISTLKSDPSSAKA-DLQGLANISVSAALSNASDTLDHISKLLLTKGDPRDKSALEDCV 102 (178)
T ss_pred CcchHHHHHHHHcCC-CChHHHHHHHHhccCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHH
Confidence 335778999999999 9999999999999999888 99999999999999999999999999987766899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHHHHhcC
Q 043247 107 CFYVGAAEDYFQKSLKSLDTNSFLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGVIALLT 179 (179)
Q Consensus 107 ~~y~~av~~~L~~A~~~l~~~~~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~Ii~~L~ 179 (179)
++|++++ +.|+++++++..++|+++ +++|+++++ |+|||.+.+.+.++|+..+++++.+|++|+++|+++|+
T Consensus 103 ~~y~~a~-~~L~~a~~~l~~~~~~d~~~~ls~a~~~~~tC~d~f~~~~~~~~~~l~~~~~~~~~l~s~alai~~~~~ 178 (178)
T TIGR01614 103 ELYSDAV-DALDKALASLKSKDYSDAETWLSSALTDPSTCEDGFEELGGIVKSPLTKRNNNVKKLSSITLAIIKMLT 178 (178)
T ss_pred HHHHHHH-HHHHHHHHHHHhcchhHHHHHHHHHHcccchHHHHhccCCCCccchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999998 999999999999999987 999999999 99999876423588999999999999999999999874
No 2
>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.
Probab=99.97 E-value=3.7e-30 Score=188.99 Aligned_cols=142 Identities=27% Similarity=0.381 Sum_probs=132.3
Q ss_pred hhhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHH
Q 043247 30 QADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCLCFY 109 (179)
Q Consensus 30 ~~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~~~y 109 (179)
...+|+.+|++| +||++|+++|.++|++..+ |+.+|++++++.++.++.++..++.++.+...+|+.+.+|++|.++|
T Consensus 3 ~~~~i~~~C~~T-~~~~~C~~~L~~~~~~~~~-d~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~~~~~~~~al~~C~~~y 80 (148)
T smart00856 3 TSKLIDSICKST-DYPDFCVSSLSSDPSSSAT-DPKDLAKIAIKVALSQATKTLSFISSLLKKTKDPRLKAALKDCLELY 80 (148)
T ss_pred HHHHHHHHhcCC-CChHHHHHHHHhcCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 467899999999 9999999999999998777 99999999999999999999999999987778999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhCCHHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHH
Q 043247 110 VGAAEDYFQKSLKSLDTNSFLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGV 174 (179)
Q Consensus 110 ~~av~~~L~~A~~~l~~~~~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~I 174 (179)
+.++ ++|++++..+..++|+++ +++|+++++ |+|||.+.+.+.++||..++.++.+|++|+|+|
T Consensus 81 ~~a~-~~L~~a~~~l~~~~~~d~~~~lsaa~t~~~tC~d~f~~~~~~~~~~l~~~~~~~~~l~s~aLai 148 (148)
T smart00856 81 DDAV-DSLEKALEELKSGDYDDVATWLSAALTDQDTCLDGFEENDDKVKSPLTKRNDNLEKLTSNALAI 148 (148)
T ss_pred HHHH-HHHHHHHHHHHhcchhHHHHHHHHHhcCcchHHhHhccCCcchhHHHHHHHHHHHHHHHHHHhC
Confidence 9998 999999999999999987 999999999 999998753246889999999999999999986
No 3
>PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues. This domain inhibits pectinesterase/pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex []. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein []. This domain is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical in structure [].; GO: 0004857 enzyme inhibitor activity, 0030599 pectinesterase activity; PDB: 1X90_A 1X8Z_C 1X91_A 1XG2_B 1RJ4_D 2CJ4_B 2XQR_F 2CJ7_A 2CJ8_A 2CJ6_A ....
Probab=99.95 E-value=1.2e-27 Score=175.97 Aligned_cols=142 Identities=26% Similarity=0.371 Sum_probs=124.8
Q ss_pred hhhHHHHHHhcccCCcc-chhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCChhHHHHHHHHHH
Q 043247 30 QADLIEETCNKIFFLSE-ACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGE-ATDPELKGYLSLCLC 107 (179)
Q Consensus 30 ~~~~i~~~C~~T~~~~~-~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~-~~d~~~k~aL~~C~~ 107 (179)
....|+.+|++| +||. +|+++|+++|..+.. |+++|+.++++++..++..+..++.++.+. .++|..+.+|++|.+
T Consensus 3 ~~~~I~~~C~~T-~~~~~~C~~~L~~~~~~~~~-d~~~l~~~av~~a~~~~~~a~~~~~~l~~~~~~~~~~~~~l~~C~~ 80 (152)
T PF04043_consen 3 TSSLIQDICKST-PYPYNLCLSTLSSDPSSSAA-DPKELARIAVQAALSNATSASAFISKLLKNPSKDPNAKQALQDCQE 80 (152)
T ss_dssp -HHHHHHHHCTS-S--HHHHHHHHHTCCCGCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-S-THHHHHHHHHHHH
T ss_pred hHHHHHHHhhCC-CCCcHHHHHHHhccCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHhhHHHHHHHH
Confidence 467999999999 9777 999999999777777 999999999999999999999999999987 789999999999999
Q ss_pred HHHHHHHHHHHHHHHHH--hhCCHHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHH
Q 043247 108 FYVGAAEDYFQKSLKSL--DTNSFLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGV 174 (179)
Q Consensus 108 ~y~~av~~~L~~A~~~l--~~~~~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~I 174 (179)
+|+.++ +.|+++++++ ..++|+++ +++|+++++ |+|+|...+.+.++||..++.++.+|++|+|+|
T Consensus 81 ~y~~a~-~~l~~a~~~l~~~~~~~~~~~~~lsaa~~~~~tC~~~f~~~~~~~~~~l~~~~~~~~~l~s~aLai 152 (152)
T PF04043_consen 81 LYDDAV-DSLQRALEALNSKNGDYDDARTWLSAALTNQDTCEDGFEEAGSPVKSPLVQRNDNVEKLSSNALAI 152 (152)
T ss_dssp HHHHHH-HHHHHHHHHH--HHT-HHHHHHHHHHHHHHHHHHHHHC-TTSSS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHhcccCCCccchHHHHHHHHHHHHHHHhhC
Confidence 999998 9999999999 99999987 999999999 999995322256899999999999999999997
No 4
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=99.93 E-value=2.2e-25 Score=193.90 Aligned_cols=145 Identities=19% Similarity=0.211 Sum_probs=126.2
Q ss_pred hhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHH
Q 043247 31 ADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCLCFYV 110 (179)
Q Consensus 31 ~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~~~y~ 110 (179)
...|+.+|+.| .||++|+++|++.|.+..+ ++++|+++++++++.++.++......+.....+++.+.||+||.|+|+
T Consensus 73 ~~~Iks~C~~T-~YP~lC~sSLs~~p~s~~~-~p~~L~~~slnvtl~~~~~a~~~s~~l~~~~~~~r~k~AL~DClELld 150 (587)
T PLN02484 73 TQAISKTCSKT-RFPNLCVDSLLDFPGSLTA-SESDLIHISFNMTLQHFSKALYLSSTISYVQMPPRVRSAYDSCLELLD 150 (587)
T ss_pred hHHHHHhccCC-CChHHHHHHHhhccccccC-CHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Confidence 45899999999 9999999999999987777 999999999999999999887765555434578899999999999999
Q ss_pred HHHHHHHHHHHHHHhhC----CHHHH---HHHccchhc-hHHhhhcC-CCCcccchhhchHhHHHHHhHHHHHHHhc
Q 043247 111 GAAEDYFQKSLKSLDTN----SFLEA---ARLARYGAK-KAQNFASL-GFDSSSTVWKKSKDLENLGFVTQGVIALL 178 (179)
Q Consensus 111 ~av~~~L~~A~~~l~~~----~~~~a---ls~A~~~~~-C~d~f~~~-~~~~~~~l~~~~~~~~~l~sial~Ii~~L 178 (179)
+++ ++|++++..+... .++++ ||+|+++++ |+|||++. +...+++|...+.++.+|++|+|+|++.+
T Consensus 151 dAi-d~L~~Sl~~l~~~~~~~~~~DvkTWLSAALTnq~TClDGF~e~~~~~vk~~m~~~l~~l~~LtSNALAIi~~~ 226 (587)
T PLN02484 151 DSV-DALSRALSSVVPSSGGGSPQDVVTWLSAALTNHDTCTEGFDGVNGGEVKDQMTGALKDLSELVSNCLAIFSAS 226 (587)
T ss_pred HHH-HHHHHHHHHHhccccccchHHHHhHHHHHhccHhhHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 998 9999999998752 35565 999999999 99999765 21457899999999999999999999875
No 5
>PLN02314 pectinesterase
Probab=99.93 E-value=3.9e-25 Score=192.68 Aligned_cols=145 Identities=17% Similarity=0.228 Sum_probs=124.8
Q ss_pred hhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHH
Q 043247 31 ADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCLCFYV 110 (179)
Q Consensus 31 ~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~~~y~ 110 (179)
...|+.+|+.| .||++|+++|++.|.+..+ |+++|+++++++++.++.++...+++|.+...+++.+.||+||.|+|+
T Consensus 70 ~~~Iks~C~~T-~YP~lC~sSLs~~p~s~~~-~p~~L~~~al~vti~~a~~a~~~~~~L~~~~~~~~~k~AL~DC~Elld 147 (586)
T PLN02314 70 ATSLKAVCSVT-RYPESCISSISSLPTSNTT-DPETLFKLSLKVAIDELSKLSDLPQKLINETNDERLKSALRVCETLFD 147 (586)
T ss_pred HHHHHHhccCC-CChHHHHHHHhcccCcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 45999999999 9999999999999988777 999999999999999999999999998765688999999999999999
Q ss_pred HHHHHHHHHHHHHHhhC---------CHHHH---HHHccchhc-hHHhhhcCCC------CcccchhhchHhHHHHHhHH
Q 043247 111 GAAEDYFQKSLKSLDTN---------SFLEA---ARLARYGAK-KAQNFASLGF------DSSSTVWKKSKDLENLGFVT 171 (179)
Q Consensus 111 ~av~~~L~~A~~~l~~~---------~~~~a---ls~A~~~~~-C~d~f~~~~~------~~~~~l~~~~~~~~~l~sia 171 (179)
+++ ++|+++++.+..+ .++++ ||+|+++++ |+|||++.+. +.+..+.....++.+|++|+
T Consensus 148 dAi-d~L~~Sl~~l~~~~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~~~k~~~s~vk~~~~~~l~n~~eLtSNa 226 (586)
T PLN02314 148 DAI-DRLNDSISSMQVGEGEKILSSSKIDDLKTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNSTEFTSNS 226 (586)
T ss_pred HHH-HHHHHHHHHHhhcccccccccccHHHHHhHHHHHhcCHhHHHHhhhccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 998 9999999988533 33455 999999999 9999975421 12334555568999999999
Q ss_pred HHHHHhc
Q 043247 172 QGVIALL 178 (179)
Q Consensus 172 l~Ii~~L 178 (179)
|+|++.+
T Consensus 227 LAIi~~l 233 (586)
T PLN02314 227 LAIVSKI 233 (586)
T ss_pred HHHHhhh
Confidence 9999875
No 6
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=99.93 E-value=4.5e-25 Score=191.44 Aligned_cols=143 Identities=15% Similarity=0.145 Sum_probs=126.8
Q ss_pred hhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCChhHHHHHHHHHHH
Q 043247 31 ADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGE--ATDPELKGYLSLCLCF 108 (179)
Q Consensus 31 ~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~--~~d~~~k~aL~~C~~~ 108 (179)
...|+.+|+.| .||++|+++|++.|.+..+ +|++|+++++++++.++.++...+.++... ..+++.+.||+||.|+
T Consensus 64 ~~~Ik~~C~~T-~Yp~lC~sSLs~~~~s~~~-~p~~L~~~al~vti~~~~~a~~~~s~l~~~~~~~d~~~k~AL~DC~EL 141 (565)
T PLN02468 64 STSVKAVCDVT-LYKDSCYETLAPAPKASQL-QPEELFKYAVKVAINELSKASQAFSNSEGFLGVKDNMTNAALNACQEL 141 (565)
T ss_pred hHHHHHhccCC-CChHHHHHHHhhcCCcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHH
Confidence 35899999999 9999999999999987666 999999999999999999999988877643 4688999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh----CCHHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHHHHhc
Q 043247 109 YVGAAEDYFQKSLKSLDT----NSFLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGVIALL 178 (179)
Q Consensus 109 y~~av~~~L~~A~~~l~~----~~~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~Ii~~L 178 (179)
|++++ ++|++++.++.. ..++++ ||+|+++++ |.|||++. ..+++|.....++.+|++|+|+|++.+
T Consensus 142 lddai-d~L~~Sl~~l~~~~~~~~~dDl~TWLSAAlTnq~TClDGF~e~--~vk~~~~~~l~n~~eLtSNaLAIi~~l 216 (565)
T PLN02468 142 LDLAI-DNLNNSLTSSGGVSVLDNVDDLRTWLSSAGTYQETCIDGLAEP--NLKSFGENHLKNSTELTSNSLAIITWI 216 (565)
T ss_pred HHHHH-HHHHHHHHHHhccccccchHHHHHHHHHHhcchhhhhhhhccc--CchHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99998 999999998863 234555 999999999 99999763 568889999999999999999999864
No 7
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=99.92 E-value=2e-24 Score=186.38 Aligned_cols=145 Identities=12% Similarity=0.199 Sum_probs=119.6
Q ss_pred hhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHH
Q 043247 31 ADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCLCFYV 110 (179)
Q Consensus 31 ~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~~~y~ 110 (179)
...|+..|+.| .||++|+++|.+.|.+....++.++++++++.++.++.++...+.++.+...+++.+.||+||.|+|+
T Consensus 34 ~~~Irs~C~~T-~YP~lC~sSLs~~~~s~s~~~~~~l~~~~~~aAl~~a~sa~~~i~~l~~~~~~~r~~~AL~DC~ELl~ 112 (539)
T PLN02995 34 STDIDGWCDKT-PYPDPCKCYFKNHNGFRQPTQISEFRVMLVEAAMDRAISARDELTNSGKNCTDFKKQAVLADCIDLYG 112 (539)
T ss_pred hHHHHhhcCCC-CChHHHHHHHhhccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHH
Confidence 34899999999 99999999999988764333899999999999999999999999988665578899999999999999
Q ss_pred HHHHHHHHHHHHHHhhC-------CHHHH---HHHccchhc-hHHhhhcCCCC-cccchhhchHhHHHHHhHHHHHHHhc
Q 043247 111 GAAEDYFQKSLKSLDTN-------SFLEA---ARLARYGAK-KAQNFASLGFD-SSSTVWKKSKDLENLGFVTQGVIALL 178 (179)
Q Consensus 111 ~av~~~L~~A~~~l~~~-------~~~~a---ls~A~~~~~-C~d~f~~~~~~-~~~~l~~~~~~~~~l~sial~Ii~~L 178 (179)
+++ ++|++++++++.. .+.++ ||+|+++++ |.|||++.+.. ..++... +.++.+|++|+|+|++.+
T Consensus 113 DAv-D~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~~~~~~v~~~v~-~~~~~~ltSNaLAi~~~l 190 (539)
T PLN02995 113 DTI-MQLNRTLQGVSPKAGAAKRCTDFDAQTWLSTALTNTETCRRGSSDLNVSDFITPIVS-NTKISHLISNCLAVNGAL 190 (539)
T ss_pred HHH-HHHHHHHHHHhhccccccccchhhHHHHHHHHhcchhhhhhhhccccchhhhhhhhh-hhhHHHHHHHHHHHhhhh
Confidence 998 9999999998633 23455 999999999 99999764211 1222222 367999999999998865
No 8
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=99.92 E-value=6.5e-24 Score=184.94 Aligned_cols=145 Identities=14% Similarity=0.128 Sum_probs=126.0
Q ss_pred hhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCChhHHHHHHHHHHH
Q 043247 31 ADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGE--ATDPELKGYLSLCLCF 108 (179)
Q Consensus 31 ~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~--~~d~~~k~aL~~C~~~ 108 (179)
...|+.+|+.| .||++|+++|++.|.+... ++++|+++++++++.++.++...++++.+. ..+++.+.||+||.|+
T Consensus 59 ~~~Iks~C~~T-~YP~~C~ssLs~~~~~~~~-~~~~Li~~sL~vtl~~a~~a~~~vs~L~~~~~~l~~r~k~AL~DClEL 136 (587)
T PLN02313 59 HAVLKSVCSST-LYPELCFSAVAATGGKELT-SQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLET 136 (587)
T ss_pred hHHHHHhccCC-CChHHHHHHHhccCCcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHH
Confidence 45899999999 9999999999998877666 899999999999999999999999988754 4788999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhC--------CHHHH---HHHccchhc-hHHhhhcCC--CCcccchhhchHhHHHHHhHHHHH
Q 043247 109 YVGAAEDYFQKSLKSLDTN--------SFLEA---ARLARYGAK-KAQNFASLG--FDSSSTVWKKSKDLENLGFVTQGV 174 (179)
Q Consensus 109 y~~av~~~L~~A~~~l~~~--------~~~~a---ls~A~~~~~-C~d~f~~~~--~~~~~~l~~~~~~~~~l~sial~I 174 (179)
|++++ ++|++++..+... .++++ ||+|+++++ |.|||++.+ ...+++|.....++.+|++|+|+|
T Consensus 137 lddav-D~L~~Sl~~l~~~~~~~~~~~~~dDlqTWLSAALTnq~TClDGF~~~~~~~~vk~~m~~~l~n~teLtSNALAI 215 (587)
T PLN02313 137 IDETL-DELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAM 215 (587)
T ss_pred HHHHH-HHHHHHHHHHhhcccccccccchhHHHHHHHHHhcchhhHHHhhhccCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 9999999998731 23455 999999999 999997432 134677888899999999999999
Q ss_pred HHhc
Q 043247 175 IALL 178 (179)
Q Consensus 175 i~~L 178 (179)
++.+
T Consensus 216 v~~~ 219 (587)
T PLN02313 216 IKNM 219 (587)
T ss_pred Hhcc
Confidence 9864
No 9
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=99.91 E-value=3.6e-23 Score=178.60 Aligned_cols=144 Identities=15% Similarity=0.224 Sum_probs=126.0
Q ss_pred chhhHHHHHHhcccCCccchhhccccccCc--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHH
Q 043247 29 VQADLIEETCNKIFFLSEACVIFLRSDGRS--YRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCL 106 (179)
Q Consensus 29 ~~~~~i~~~C~~T~~~~~~C~~~L~~~p~s--~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~ 106 (179)
...+.|+..|+.| .||+.|+++|+..+.. ... ++.+|++.++++++.++..+...++.+.....+++.+.||+||.
T Consensus 48 ~~~~~Iks~C~~T-~YP~~C~ssLs~~a~~~~~~~-~p~~L~~aaL~vsl~~a~~a~~~vs~l~~~~~~~~~~aAL~DC~ 125 (548)
T PLN02301 48 SPPSLLQTLCDRA-HDQDSCQAMVSEIATNTVMKL-NRVDLLQVLLKESTPHLQNTIEMASEIRIRINDPRDKAALADCV 125 (548)
T ss_pred CchHHHHHHhcCC-CChHHHHHHHhhccCcccccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHH
Confidence 3568999999999 9999999999987753 233 79999999999999999999999998865568899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhh---CCHHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHHHHhc
Q 043247 107 CFYVGAAEDYFQKSLKSLDT---NSFLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGVIALL 178 (179)
Q Consensus 107 ~~y~~av~~~L~~A~~~l~~---~~~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~Ii~~L 178 (179)
|+|++++ ++|++++++++. +++.++ ||+|+++++ |.|||.+. .++++.....++.+|++|+|+|++.+
T Consensus 126 ELl~dav-d~L~~Sl~~l~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~---~~~~~~~~l~n~~qL~SNsLAiv~~l 200 (548)
T PLN02301 126 ELMDLSK-DRIKDSVEALGNVTSKSHADAHTWLSSVLTNHVTCLDGINGP---SRQSMKPGLKDLISRARTSLAILVSV 200 (548)
T ss_pred HHHHHHH-HHHHHHHHHhhcccccchHHHHHHHHHHhcchhhHHhhhhhh---hhhhHHHHHHHHHHHHHHHHHhhccc
Confidence 9999998 999999988864 235565 899999999 99999763 46789999999999999999999865
No 10
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=99.91 E-value=3.1e-23 Score=178.76 Aligned_cols=147 Identities=13% Similarity=0.071 Sum_probs=124.1
Q ss_pred hhhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHH
Q 043247 30 QADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCLCFY 109 (179)
Q Consensus 30 ~~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~~~y 109 (179)
....|+..|+.| .||+.|+++|++.+.....+||++|+++++++++.++..+...+..+.+...+++.+.||+||.|+|
T Consensus 33 ~~~~I~s~C~~T-~YP~~C~ssLs~~~~~~~~~~p~~L~~aAL~vtl~~a~~a~~~v~~l~~~~~~~r~~~Al~DC~Ell 111 (537)
T PLN02506 33 FQALIAQACQFV-ENHSSCVSNIQAELKKSGPRTPHSVLSAALKATLDEARLAIDMITKFNALSISYREQVAIEDCKELL 111 (537)
T ss_pred HHHHHHHHccCC-CCcHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 456999999999 9999999999975443332389999999999999999999999998865567889999999999999
Q ss_pred HHHHHHHHHHHHHHHhhC----C----HHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHHHHh
Q 043247 110 VGAAEDYFQKSLKSLDTN----S----FLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGVIAL 177 (179)
Q Consensus 110 ~~av~~~L~~A~~~l~~~----~----~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~Ii~~ 177 (179)
++++ ++|++++.+++.. . .+++ ||+|+++++ |.|||++.+.+.+..+.....++.+|+||+|+|++.
T Consensus 112 ddSv-d~L~~Sl~el~~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~~~~k~~v~~~l~nv~~LtSNALAiv~~ 190 (537)
T PLN02506 112 DFSV-SELAWSLLEMNKIRAGHDNVAYEGNLKAWLSAALSNQDTCLEGFEGTDRHLENFIKGSLKQVTQLISNVLAMYTQ 190 (537)
T ss_pred HHHH-HHHHHHHHHHhhcccccccccchhhHHhHHHHHhccHhHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9998 9999999888531 1 2344 899999999 999997653234667888889999999999999975
Q ss_pred c
Q 043247 178 L 178 (179)
Q Consensus 178 L 178 (179)
+
T Consensus 191 l 191 (537)
T PLN02506 191 L 191 (537)
T ss_pred c
Confidence 4
No 11
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=99.90 E-value=5.6e-23 Score=177.50 Aligned_cols=147 Identities=10% Similarity=0.062 Sum_probs=122.4
Q ss_pred hhhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCChhHHHHHHHHHHH
Q 043247 30 QADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGE-ATDPELKGYLSLCLCF 108 (179)
Q Consensus 30 ~~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~-~~d~~~k~aL~~C~~~ 108 (179)
..+.|+.+|+.| +||++|+++|+++|......++..+++.+++.+...+..+...++.+... ..+++.+.||+||.|+
T Consensus 37 ~~~~Iks~C~~T-~YP~lC~~sLss~~~~~~s~~~~~ll~~sL~~A~~~~~~~s~l~s~~~~~~~~~~~~k~AL~DC~El 115 (541)
T PLN02416 37 HLSSLTSFCKST-PYPDACFDSLKLSISINISPNILNFLLQTLQTAISEAGKLTNLLSGAGQSSNIIEKQRGTIQDCKEL 115 (541)
T ss_pred HHHHHHHhcCCC-CChHHHHHHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHH
Confidence 567999999999 99999999999987543223778899999999988888887777665433 3578899999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCC---HHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHHHHhc
Q 043247 109 YVGAAEDYFQKSLKSLDTNS---FLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGVIALL 178 (179)
Q Consensus 109 y~~av~~~L~~A~~~l~~~~---~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~Ii~~L 178 (179)
|++++ ++|++++.+|..++ +.++ +|+|+++++ |+|||++.+...++++..+..++.++++|+|+|++.+
T Consensus 116 ~~dAv-D~L~~Sl~~L~~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~~~~~~~~i~~~~~~v~qltSNALAlv~~~ 191 (541)
T PLN02416 116 HQITV-SSLKRSVSRIQAGDSRKLADARAYLSAALTNKNTCLEGLDSASGPLKPKLVNSFTSTYKHVSNSLSMLPKS 191 (541)
T ss_pred HHHHH-HHHHHHHHHHhhccccchhhHHHHHHHHhcchhhHHhhhhhcCcchhhHHHHHHHHHHHHHHHHHHHhccc
Confidence 99998 99999999997543 3344 899999999 9999986532357889999999999999999998754
No 12
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=99.90 E-value=3.5e-23 Score=181.41 Aligned_cols=144 Identities=17% Similarity=0.192 Sum_probs=123.1
Q ss_pred hhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHH
Q 043247 31 ADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCLCFYV 110 (179)
Q Consensus 31 ~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~~~y~ 110 (179)
.+.|+..|+.| .||++|+++|+..| .... ++++|+++++++++.++.++...+.++.+...+++++.||+||.|+|+
T Consensus 53 ~~~Ikt~C~sT-~YP~lC~sSLs~~~-~~~~-~p~dLi~aaL~vTl~a~~~a~~~~s~L~~~~~~~r~k~AL~DClELld 129 (670)
T PLN02217 53 VKAIKDVCAPT-DYKETCEDTLRKDA-KNTS-DPLELVKTAFNATMKQISDVAKKSQTMIELQKDPRTKMALDQCKELMD 129 (670)
T ss_pred HHHHHHHhcCC-CCcHHHHHHhhhhc-ccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHH
Confidence 35899999999 99999999999988 4444 899999999999999999999999888544578899999999999999
Q ss_pred HHHHHHHHHHHHHHhhC--C-----HHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHHHHhc
Q 043247 111 GAAEDYFQKSLKSLDTN--S-----FLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGVIALL 178 (179)
Q Consensus 111 ~av~~~L~~A~~~l~~~--~-----~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~Ii~~L 178 (179)
+++ ++|++++..+... . .+++ ||+|++|++ |.|||++.+...+..|.....++.+|++|+|+|++.+
T Consensus 130 dAv-DeL~~Sl~~L~~~~~~~~~~~~dDvqTWLSAALTnQdTClDGF~~~~~~vk~~m~~~l~nvseLtSNALAmv~~l 207 (670)
T PLN02217 130 YAI-GELSKSFEELGKFEFHKVDEALIKLRIWLSATISHEQTCLDGFQGTQGNAGETIKKALKTAVQLTHNGLAMVSEM 207 (670)
T ss_pred HHH-HHHHHHHHHHhhccccccccchhHHHHHHHHHHhchhHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 998 9999999998732 1 2344 899999999 9999975431346667788899999999999999864
No 13
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=99.90 E-value=9.8e-23 Score=176.96 Aligned_cols=142 Identities=23% Similarity=0.227 Sum_probs=120.6
Q ss_pred hHHHHHHhcccCCccchhhcccc-ccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCChhHHHHHHHHHHH
Q 043247 32 DLIEETCNKIFFLSEACVIFLRS-DGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGE--ATDPELKGYLSLCLCF 108 (179)
Q Consensus 32 ~~i~~~C~~T~~~~~~C~~~L~~-~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~--~~d~~~k~aL~~C~~~ 108 (179)
..|+..|+.| .||++|+++|++ .|. .. +|++|++.++++++.++.++...+.+++.. ..+++.+.||+||.|+
T Consensus 54 ~~Ik~~C~~T-~YP~lC~ssLs~a~~~--~~-~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~r~k~Al~DC~EL 129 (572)
T PLN02990 54 KAVEAVCAPT-DYKETCVNSLMKASPD--ST-QPLDLIKLGFNVTIRSINDSIKKASGELKAKAANDPETKGALELCEKL 129 (572)
T ss_pred HHHHHhhcCC-CCcHHHHHHhhhcccc--CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHH
Confidence 5899999999 999999999997 443 34 899999999999999999999988877643 5789999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCC-------HHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHHHHh
Q 043247 109 YVGAAEDYFQKSLKSLDTNS-------FLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGVIAL 177 (179)
Q Consensus 109 y~~av~~~L~~A~~~l~~~~-------~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~Ii~~ 177 (179)
|++++ ++|+++++.+...+ ++++ ||+|+++++ |.|||++.+.+.++.+.....++.+|++|+|+|++.
T Consensus 130 lddAv-deL~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~e~~s~lk~~~~~~l~nv~~LtSNALAiv~~ 208 (572)
T PLN02990 130 MNDAT-DDLKKCLDNFDGFSIDQIEDFVEDLRVWLSGSIAYQQTCMDTFEEIKSNLSQDMLKIFKTSRELTSNGLAMITN 208 (572)
T ss_pred HHHHH-HHHHHHHHHHhhcccccccchhHHHHHHHHHHhccHhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99998 99999999987322 3444 999999999 999997543234566777778899999999999986
Q ss_pred c
Q 043247 178 L 178 (179)
Q Consensus 178 L 178 (179)
+
T Consensus 209 ~ 209 (572)
T PLN02990 209 I 209 (572)
T ss_pred h
Confidence 4
No 14
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=99.90 E-value=2e-22 Score=174.59 Aligned_cols=144 Identities=12% Similarity=0.085 Sum_probs=120.8
Q ss_pred hhhHHHHHHhcccCCccchhhccccccCc-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CChhHHHHHHHHHH
Q 043247 30 QADLIEETCNKIFFLSEACVIFLRSDGRS-YRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEA-TDPELKGYLSLCLC 107 (179)
Q Consensus 30 ~~~~i~~~C~~T~~~~~~C~~~L~~~p~s-~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~-~d~~~k~aL~~C~~ 107 (179)
....|+..|+.| +||++|+++|+++|.. ... ++.+|+++++++++.++.++...++.+.+.. .+...+.||+||.|
T Consensus 43 ~~~~I~s~C~~T-~YP~lC~sSLs~~~~~~~~~-~p~~Li~aAL~vsl~~a~~a~~~v~~L~~~~~~~~~~~~AL~DC~E 120 (553)
T PLN02708 43 TPPQILLACNAT-RFPDTCVSSLSNAGRVPPDP-KPIQIIQSAISVSRENLKTAQSMVKSILDSSAGNVNRTTAATNCLE 120 (553)
T ss_pred ccHHHHHhccCC-CCcHHHHHHHhhccCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHH
Confidence 467899999999 9999999999998853 344 7999999999999999999999999887642 34444689999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCCHHHH---HHHccchhc-hHHhhhcCCC--CcccchhhchHhHHHHHhHHHHHHHh
Q 043247 108 FYVGAAEDYFQKSLKSLDTNSFLEA---ARLARYGAK-KAQNFASLGF--DSSSTVWKKSKDLENLGFVTQGVIAL 177 (179)
Q Consensus 108 ~y~~av~~~L~~A~~~l~~~~~~~a---ls~A~~~~~-C~d~f~~~~~--~~~~~l~~~~~~~~~l~sial~Ii~~ 177 (179)
+|++++ ++|++++..+....++++ ||+|+++++ |.|||.+.+. ..+..+ ....++.+|++|+|+|++.
T Consensus 121 Llddav-d~L~~Sl~~L~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~v~~~~-~~L~nvs~LtSNSLAmv~~ 194 (553)
T PLN02708 121 VLSNSE-HRISSTDIALPRGKIKDARAWMSAALLYQYDCWSALKYVNDTSQVNDTM-SFLDSLIGLTSNALSMMAS 194 (553)
T ss_pred HHHHHH-HHHHHHHHHhhhcchHHHHHHHHHHhccHhHHHHHhhccCccchHHHHH-HHHHHHHHHHHHHHHhhhc
Confidence 999998 999999999987777776 999999999 9999975421 122233 5678899999999999985
No 15
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=99.89 E-value=1.8e-22 Score=175.94 Aligned_cols=141 Identities=13% Similarity=0.189 Sum_probs=122.6
Q ss_pred hhHHHHHHhcccCCccchhhccccccC--cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHH
Q 043247 31 ADLIEETCNKIFFLSEACVIFLRSDGR--SYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCLCF 108 (179)
Q Consensus 31 ~~~i~~~C~~T~~~~~~C~~~L~~~p~--s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~~~ 108 (179)
.+.|+.+|+.| .||+.|+++|++... ...+ +|.+|+++++++++..+..+...+.++. ..+++.+.||+||.|+
T Consensus 79 ~~~Ik~~C~~T-~YP~~C~sSLs~~~~~~~~~~-~p~~Ll~aAL~vtl~~~~~a~~~~~~l~--~~~~r~k~Al~DC~EL 154 (596)
T PLN02745 79 DKIIQTVCNAT-LYKQTCENTLKKGTEKDPSLA-QPKDLLKSAIKAVNDDLDKVLKKVLSFK--FENPDEKDAIEDCKLL 154 (596)
T ss_pred HHHHHHhcCCC-CChHHHHHHHHhhcccccccC-CHHHHHHHHHHHHHHHHHHHHHHHHhhc--cCCHHHHHHHHHHHHH
Confidence 47899999999 999999999998543 2334 8999999999999999999988888774 3788999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh------CCHHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHHHHhc
Q 043247 109 YVGAAEDYFQKSLKSLDT------NSFLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGVIALL 178 (179)
Q Consensus 109 y~~av~~~L~~A~~~l~~------~~~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~Ii~~L 178 (179)
|++++ ++|++++..+.. ..+.++ ||+|+++++ |.|||++. ..+++|.....++.+|++|+|+|++.+
T Consensus 155 lddAi-d~L~~Sl~~l~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~--~l~s~m~~~l~~~~eLtSNALAiv~~l 231 (596)
T PLN02745 155 VEDAK-EELKASISRINDEVNKLAKNVPDLNNWLSAVMSYQETCIDGFPEG--KLKSEMEKTFKSSQELTSNSLAMVSSL 231 (596)
T ss_pred HHHHH-HHHHHHHHHHhhcccccccchHHHHHHHHHHhccHhHHHhhhccc--chHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99998 999999999863 223444 999999999 99999763 568899999999999999999999865
No 16
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=99.89 E-value=1e-22 Score=176.62 Aligned_cols=143 Identities=10% Similarity=0.085 Sum_probs=119.8
Q ss_pred chhhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CChhHHHHHHHH
Q 043247 29 VQADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEA---TDPELKGYLSLC 105 (179)
Q Consensus 29 ~~~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~---~d~~~k~aL~~C 105 (179)
.....+...|+.| +||++|+++|+.. ... ++++|+++++++++.++..+...++++.+.. .+++.+.||+||
T Consensus 30 ~~~~~~~s~C~~T-~YP~~C~ssLs~s---~~~-d~~~l~~aaL~~tl~~a~~a~~~vs~L~~~~~~~~~~r~k~AL~DC 104 (566)
T PLN02713 30 STPVSPSTICNTT-PDPSFCKSVLPHN---QPG-NVYDYGRFSVRKSLSQSRKFLSLVDRYLKRNSTLLSKSAIRALEDC 104 (566)
T ss_pred CCCCCCccccCCC-CChHHHHHHhccc---cCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHH
Confidence 3556778899999 9999999999752 233 8999999999999999999999999987652 388999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhC-------CHHHH---HHHccchhc-hHHhhhcCCC--CcccchhhchHhHHHHHhHHH
Q 043247 106 LCFYVGAAEDYFQKSLKSLDTN-------SFLEA---ARLARYGAK-KAQNFASLGF--DSSSTVWKKSKDLENLGFVTQ 172 (179)
Q Consensus 106 ~~~y~~av~~~L~~A~~~l~~~-------~~~~a---ls~A~~~~~-C~d~f~~~~~--~~~~~l~~~~~~~~~l~sial 172 (179)
.|+|++++ ++|++++..++.. .++++ ||+|++|++ |.|||.+.+. ..+..+.....++.+|++|+|
T Consensus 105 ~ELlddav-D~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~~k~~v~~~l~nvt~LtSNaL 183 (566)
T PLN02713 105 QFLAGLNI-DFLLSSFETVNSSSKTLSDPQADDVQTLLSAILTNQQTCLDGLQAASSAWSVRNGLAVPLSNDTKLYSVSL 183 (566)
T ss_pred HHHHHHHH-HHHHHHHHHHhhccccccccchhhHHHHHHHhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 9999999999732 24455 999999999 9999976421 124457777889999999999
Q ss_pred HHHHh
Q 043247 173 GVIAL 177 (179)
Q Consensus 173 ~Ii~~ 177 (179)
+|++.
T Consensus 184 Alv~~ 188 (566)
T PLN02713 184 ALFTK 188 (566)
T ss_pred HHhcc
Confidence 99975
No 17
>PLN02197 pectinesterase
Probab=99.89 E-value=4.8e-22 Score=172.65 Aligned_cols=141 Identities=13% Similarity=0.129 Sum_probs=120.8
Q ss_pred hhhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccCCChhHHHHHHHHH
Q 043247 30 QADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLE---GEATDPELKGYLSLCL 106 (179)
Q Consensus 30 ~~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~---~~~~d~~~k~aL~~C~ 106 (179)
....|+.+|+.| .||+.|+++|++.| .. ++++|++.++++++.++.++...+..+. ....+++++.||+||.
T Consensus 37 ~~k~I~s~C~~T-~YP~lC~ssLs~~~---s~-~p~~L~~aaL~vtl~~~~~a~~~~s~l~~~~~~~~~~r~k~Al~DC~ 111 (588)
T PLN02197 37 QMKAVQGICQST-SDKASCVKTLEPVK---SD-DPNKLIKAFMLATKDAITKSSNFTGQTEGNMGSSISPNNKAVLDYCK 111 (588)
T ss_pred hHHHHHHhcCCC-CChHHHHHHHhhcc---CC-CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHHHHHHHHH
Confidence 344899999999 99999999999987 34 8999999999999999999999988664 1246889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhh------CCHHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHHHH
Q 043247 107 CFYVGAAEDYFQKSLKSLDT------NSFLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGVIA 176 (179)
Q Consensus 107 ~~y~~av~~~L~~A~~~l~~------~~~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~Ii~ 176 (179)
|+|++++ ++|++++..+.. ....++ ||+|++|++ |.|||.+. ..+..+.....++.+|++|+|+|++
T Consensus 112 eLl~dav-d~L~~Sl~~l~~~~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~--~~k~~v~~~l~nv~~LtSNaLAiv~ 188 (588)
T PLN02197 112 RVFMYAL-EDLSTIVEEMGEDLNQIGSKIDQLKQWLTGVYNYQTDCLDDIEED--DLRKTIGEGIANSKILTSNAIDIFH 188 (588)
T ss_pred HHHHHHH-HHHHHHHHHHhhcccccccchhhHHHHHHHHHhChhhhhccccCc--chHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999998 999999999872 113444 999999999 99999763 4566788888999999999999987
Q ss_pred hc
Q 043247 177 LL 178 (179)
Q Consensus 177 ~L 178 (179)
.+
T Consensus 189 ~l 190 (588)
T PLN02197 189 SV 190 (588)
T ss_pred cc
Confidence 64
No 18
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=99.86 E-value=4.3e-21 Score=164.50 Aligned_cols=144 Identities=13% Similarity=0.115 Sum_probs=123.2
Q ss_pred cchhhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-C--CChhHHHHHHH
Q 043247 28 LVQADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGE-A--TDPELKGYLSL 104 (179)
Q Consensus 28 ~~~~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~-~--~d~~~k~aL~~ 104 (179)
......|+..|+.| .||+.|+++|++.|. ++++|++.++++++.++..+...+.++.+. . .+++.+.+++|
T Consensus 19 ~~~~~~I~~~C~~T-~YP~~C~ssLs~~~~-----~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~~r~~~Al~D 92 (497)
T PLN02698 19 FAYQNEVQRECSFT-KYPSLCVQTLRGLRH-----DGVDIVSVLVNKTISETNLPLSSSMGSSYQLSLEEATYTPSVSDS 92 (497)
T ss_pred hhHHHHHHHhccCC-CChHHHHHHHhccCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcChHHHHHHHH
Confidence 34678899999999 999999999998763 799999999999999999999999987654 2 34788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh---CCHHHH---HHHccchhc-hHHhhhcC----CCCcccchhhchHhHHHHHhHHHH
Q 043247 105 CLCFYVGAAEDYFQKSLKSLDT---NSFLEA---ARLARYGAK-KAQNFASL----GFDSSSTVWKKSKDLENLGFVTQG 173 (179)
Q Consensus 105 C~~~y~~av~~~L~~A~~~l~~---~~~~~a---ls~A~~~~~-C~d~f~~~----~~~~~~~l~~~~~~~~~l~sial~ 173 (179)
|.|+|++++ ++|++++..+.. ..+.++ ||+|+++++ |.|||.+. +...++++..+..++.+|++|+|+
T Consensus 93 C~Ell~dsv-d~L~~Sl~~l~~~~~~~~~Dv~TWLSAALT~q~TClDGF~~~~~~~~~~v~~~i~~~l~~~~~ltSNALA 171 (497)
T PLN02698 93 CERLMKMSL-KRLRQSLLALKGSSRKNKHDIQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKMDHLSRLVSNSLA 171 (497)
T ss_pred HHHHHHHHH-HHHHHHHHHHhhccccchhHHHHHHHHhhcchhhHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 999999998875 334555 999999999 99999531 113467889999999999999999
Q ss_pred HHHhc
Q 043247 174 VIALL 178 (179)
Q Consensus 174 Ii~~L 178 (179)
|++.+
T Consensus 172 mv~~l 176 (497)
T PLN02698 172 LVNRI 176 (497)
T ss_pred HHhhh
Confidence 99865
No 19
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=99.83 E-value=4.2e-20 Score=159.75 Aligned_cols=138 Identities=13% Similarity=0.116 Sum_probs=117.4
Q ss_pred HHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCChhHHHHHHHHHHHHH
Q 043247 36 ETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGE-----ATDPELKGYLSLCLCFYV 110 (179)
Q Consensus 36 ~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~-----~~d~~~k~aL~~C~~~y~ 110 (179)
..|+.| .||++|+++|++.+.+. . ++.++++.++++++.++..+...+.++... ..+++.+.||+||.|+++
T Consensus 4 ~~C~~T-~YP~lC~ssLs~~~~~~-~-~p~~l~~aaL~vtl~~a~~a~~~vs~l~~~~~~~~~~~~r~~~AL~DC~ELld 80 (538)
T PLN03043 4 LACKST-LYPKLCRSILSTVKSSP-S-DPYEYGKFSVKQCLKQARRLSKVINYYLTHENQPGKMTHEEIGALADCGELSE 80 (538)
T ss_pred cccCCC-CCcHHHHHHHhhccCCC-C-CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCHHHHHHHHHHHHHHH
Confidence 579999 99999999999877543 4 899999999999999999999999988632 367889999999999999
Q ss_pred HHHHHHHHHHHHHHhhCC------HHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHHHHh
Q 043247 111 GAAEDYFQKSLKSLDTNS------FLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGVIAL 177 (179)
Q Consensus 111 ~av~~~L~~A~~~l~~~~------~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~Ii~~ 177 (179)
+++ ++|++++..+.... .+++ ||+|++|++ |.|||.+.+...+..+.....++.+|++|+|+|++.
T Consensus 81 dSv-D~L~~Sl~~L~~~~~~~~~~~~DvqTWLSAALTnqdTClDGF~~~~~~~k~~i~~~l~nvt~LtSNaLAlv~~ 156 (538)
T PLN03043 81 LNV-DYLETISSELKSAELMTDALVERVTSLLSGVVTNQQTCYDGLVDSKSSFAAALGAPLGNLTRLYSVSLGLVSH 156 (538)
T ss_pred HHH-HHHHHHHHHHhccccccccchhhHHHhHHHhhcChhhhhchhhccchhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 998 99999999986432 2344 999999999 999997543134666888889999999999999974
No 20
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=99.72 E-value=1.2e-16 Score=137.43 Aligned_cols=128 Identities=13% Similarity=0.075 Sum_probs=104.8
Q ss_pred ccchhhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHH
Q 043247 27 TLVQADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCL 106 (179)
Q Consensus 27 ~~~~~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~ 106 (179)
+....+..+..|.++ +..+++++++++..++.++...+.++.+...+++.+.||+||.
T Consensus 22 ~~~~~~~~~~~~~~~----------------------~~~~~~~~L~~tl~~a~~a~~~vs~l~~~~~~~r~~~Al~DC~ 79 (520)
T PLN02201 22 AFSSTDLLQMECLKV----------------------PPSEFVSSLKTTVDVIRKVVSIVSQFDKVFGDSRLSNAISDCL 79 (520)
T ss_pred ccccccchhhhhhhc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHH
Confidence 334567777788877 4578889999999999999999998876556889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhCC---------HHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHH
Q 043247 107 CFYVGAAEDYFQKSLKSLDTNS---------FLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQG 173 (179)
Q Consensus 107 ~~y~~av~~~L~~A~~~l~~~~---------~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~ 173 (179)
|++++++ ++|++++..++... ..++ ||+|+++++ |.|||.+.+...++.+.....++.+|++|+|+
T Consensus 80 ELl~dav-D~L~~Sl~eL~~~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~k~~v~~~l~nvt~LtSNaLA 158 (520)
T PLN02201 80 DLLDFAA-EELSWSISASQNPNGKDNSTGDVGSDLRTWLSAALSNQDTCIEGFDGTNGIVKKLVAGSLSQVGSTVRELLT 158 (520)
T ss_pred HHHHHHH-HHHHHHHHHHhhccccccccccchhHHHHHHHhhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHH
Confidence 9999998 99999999886321 2344 899999999 99999765313455677778899999999999
Q ss_pred HHHh
Q 043247 174 VIAL 177 (179)
Q Consensus 174 Ii~~ 177 (179)
|++.
T Consensus 159 Lv~~ 162 (520)
T PLN02201 159 MVHP 162 (520)
T ss_pred Hhcc
Confidence 9864
No 21
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=99.71 E-value=3.1e-16 Score=134.94 Aligned_cols=115 Identities=12% Similarity=0.082 Sum_probs=98.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCHHHH---HH
Q 043247 63 DVKGLARIMLDKTIAKAADTIRLIEKLEGE---ATDPELKGYLSLCLCFYVGAAEDYFQKSLKSLDT--NSFLEA---AR 134 (179)
Q Consensus 63 d~~~La~ia~~~a~~~a~~~~~~i~~l~~~---~~d~~~k~aL~~C~~~y~~av~~~L~~A~~~l~~--~~~~~a---ls 134 (179)
|+++|++.++++++.++.++...++.+.+. ..+++++.||+||.|+|++++ ++|++++..+.. +.+.++ ||
T Consensus 50 ~~~~L~~aaL~vtl~~a~~a~~~vs~L~~~~~~~l~~r~~~Al~DC~El~~dav-d~L~~S~~~l~~~~~~~~Dv~TWLS 128 (530)
T PLN02933 50 TIPELIIADLNLTILKVNLASSNFSDLQTRLGPNLTHRERCAFEDCLGLLDDTI-SDLTTAISKLRSSSPEFNDVSMLLS 128 (530)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcccchhHHHHHHH
Confidence 899999999999999999999999988653 368899999999999999998 999999999875 455666 99
Q ss_pred Hccchhc-hHHhhhcCCC--------CcccchhhchHhHHHHHhHHHHHHHhc
Q 043247 135 LARYGAK-KAQNFASLGF--------DSSSTVWKKSKDLENLGFVTQGVIALL 178 (179)
Q Consensus 135 ~A~~~~~-C~d~f~~~~~--------~~~~~l~~~~~~~~~l~sial~Ii~~L 178 (179)
+|+++++ |+|||++.+. ..+..+.....++.+|++|+|+|++.+
T Consensus 129 AALT~q~TC~DGF~~~~~~~~~~~~~~vk~~v~~~l~~v~~LtSNALAlv~~l 181 (530)
T PLN02933 129 NAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNI 181 (530)
T ss_pred HHhcchhhHhhhhhccCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999 9999975420 134567777789999999999999854
No 22
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=99.57 E-value=1.4e-14 Score=123.54 Aligned_cols=138 Identities=12% Similarity=-0.003 Sum_probs=115.7
Q ss_pred HHHhcccCCccchhhcccccc----CcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-ChhHHHHHHHH----H
Q 043247 36 ETCNKIFFLSEACVIFLRSDG----RSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEAT-DPELKGYLSLC----L 106 (179)
Q Consensus 36 ~~C~~T~~~~~~C~~~L~~~p----~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~-d~~~k~aL~~C----~ 106 (179)
.+|.++ ++|+.|...|+... ..... ++..+....++.++.++..+...+.++.+... +++++.+++|| .
T Consensus 3 ~~c~~~-~~~~~c~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~a~~dc~~~c~ 80 (509)
T PLN02488 3 GVCKGY-DDKQSCQNLLLELKTVSSSLSEM-RCRDLLIIVLKNSVWRIDMAMIGVMEDTKLLEEMENDMLGVKEDTNLFE 80 (509)
T ss_pred eecCCC-CChHHHHHHHHhhhccccccccC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhhhHHHhHHHHH
Confidence 379999 99999999988765 33333 68899999999999999999999998887755 99999999999 9
Q ss_pred HHHHHHHHHHHHHHHHHHhhC------CHHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHHHH
Q 043247 107 CFYVGAAEDYFQKSLKSLDTN------SFLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGVIA 176 (179)
Q Consensus 107 ~~y~~av~~~L~~A~~~l~~~------~~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~Ii~ 176 (179)
|+|++++ ++|.+++..+... ..+++ ||+|++|++ |.|||.. + +.+..|.....++.+|++++|+|+.
T Consensus 81 el~~~~~-~~l~~s~~~~~~~~~~~~~~~~d~~twLSa~lt~q~TC~dg~~~-~-~~~~~~~~~l~~~~~~~sn~La~~~ 157 (509)
T PLN02488 81 EMMESAK-DRMIRSVEELLGGESPNLGSYENVHTWLSGVLTSYITCIDEIGE-G-AYKRRVEPELEDLISRARVALAIFI 157 (509)
T ss_pred HHHHHHH-HHHHHHHHHhhcccccccCcHHHHHHHHHHhHhchhhHhccccC-c-chHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999998 9999999998521 23455 999999999 9999943 2 4456677778899999999999987
Q ss_pred hc
Q 043247 177 LL 178 (179)
Q Consensus 177 ~L 178 (179)
.+
T Consensus 158 ~~ 159 (509)
T PLN02488 158 SI 159 (509)
T ss_pred cc
Confidence 53
No 23
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=99.30 E-value=1.3e-11 Score=106.28 Aligned_cols=120 Identities=13% Similarity=0.012 Sum_probs=86.5
Q ss_pred CCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043247 43 FLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCLCFYVGAAEDYFQKSLK 122 (179)
Q Consensus 43 ~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~~~y~~av~~~L~~A~~ 122 (179)
+||+-|..+|++...+ -++.+...+++..+..+..+.. ...-.|++||.|++++++ ++|++++.
T Consensus 58 ~~~~~~~~~~s~~~~~----~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Al~DC~ELlddav-d~L~~S~~ 121 (529)
T PLN02170 58 PSSSSKQGFLSSVQES----MNHALFARSLAFNLTLSHRTVQ-----------THTFDPVNDCLELLDDTL-DMLSRIVV 121 (529)
T ss_pred CCcchhhhhhhhhhcc----ChHHHHHhhhHhhhhhhhhhcc-----------cchhHHHHHHHHHHHHHH-HHHHHHHH
Confidence 8999999999876432 3666777777765552221111 112569999999999998 99999996
Q ss_pred HHhhC-CHHHH---HHHccchhc-hHHhhhcCCC--CcccchhhchHhHHHHHhHHHHHHHhc
Q 043247 123 SLDTN-SFLEA---ARLARYGAK-KAQNFASLGF--DSSSTVWKKSKDLENLGFVTQGVIALL 178 (179)
Q Consensus 123 ~l~~~-~~~~a---ls~A~~~~~-C~d~f~~~~~--~~~~~l~~~~~~~~~l~sial~Ii~~L 178 (179)
..... ..+++ ||+|+++++ |.|||++.+. ..+..+.....++.+|++|+|+|++.+
T Consensus 122 ~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~~~~~~~~~~~~~~l~nv~eLtSNALALv~~~ 184 (529)
T PLN02170 122 IKHADHDEEDVHTWLSAALTNQETCEQSLQEKSSSYKHGLAMDFVARNLTGLLTNSLDLFVSV 184 (529)
T ss_pred hhccccchhHHHHHHHHHHhchhhHhhhhhccCccchhHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 55432 23455 899999999 9999976431 122345556688999999999999764
No 24
>PLN02916 pectinesterase family protein
Probab=98.97 E-value=1.9e-09 Score=92.64 Aligned_cols=80 Identities=13% Similarity=0.004 Sum_probs=64.3
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHh
Q 043247 94 TDPELKGYLSLCLCFYVGAAEDYFQKSLKSLDTNSFLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGF 169 (179)
Q Consensus 94 ~d~~~k~aL~~C~~~y~~av~~~L~~A~~~l~~~~~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~s 169 (179)
.+-....||+||.|+|++++ ++|++++..+......++ ||+|+++++ |.|||.+.+ ... .....++.+|+|
T Consensus 57 ~~~~~~~Al~DC~ELl~dSv-d~L~~Sl~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~~-~~~---~~~v~nvt~ltS 131 (502)
T PLN02916 57 SYYNLGEALSDCEKLYDESE-ARLSKLLVSHENFTVEDARTWLSGVLANHHTCLDGLEQKG-QGH---KPMAHNVTFVLS 131 (502)
T ss_pred CcccHhHHHHHHHHHHHHHH-HHHHHHHHhhccCchHHHHHHHHHHHhCHhHHHHhhhhcc-ccc---hHHHHHHHHHHH
Confidence 34457789999999999998 999999988875555665 999999999 999997542 222 234568999999
Q ss_pred HHHHHHHhc
Q 043247 170 VTQGVIALL 178 (179)
Q Consensus 170 ial~Ii~~L 178 (179)
|+|+|++.+
T Consensus 132 NaLAlv~~~ 140 (502)
T PLN02916 132 EALALYKKS 140 (502)
T ss_pred HHHHHhhhh
Confidence 999999764
No 25
>PF07870 DUF1657: Protein of unknown function (DUF1657); InterPro: IPR012452 This domain appears to be restricted to the Bacillales.
Probab=80.85 E-value=9.3 Score=22.58 Aligned_cols=44 Identities=14% Similarity=0.063 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHH
Q 043247 74 KTIAKAADTIRLIEKLEGEATDPELKGYLSLCLCFYVGAAEDYFQ 118 (179)
Q Consensus 74 ~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~~~y~~av~~~L~ 118 (179)
.++.....+.+....+.-.+.|+..|..+..|.+..+..+ ..|+
T Consensus 4 q~lAslK~~qA~Le~fal~T~d~~AK~~y~~~a~~l~~ii-~~L~ 47 (50)
T PF07870_consen 4 QTLASLKKAQADLETFALQTQDQEAKQMYEQAAQQLEEII-QDLE 47 (50)
T ss_pred HHHHHHHHHHhhHHHHHhhcCCHHHHHHHHHHHHHHHHHH-HHhH
Confidence 3444555555555554444689999999999999999998 7765
No 26
>KOG1733 consensus Mitochondrial import inner membrane translocase, subunit TIM13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=77.66 E-value=18 Score=24.18 Aligned_cols=58 Identities=17% Similarity=0.239 Sum_probs=38.7
Q ss_pred CHHHHHHHHH--HHHHHHHHHHHHHHHHH-----hcc---CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 043247 63 DVKGLARIML--DKTIAKAADTIRLIEKL-----EGE---ATDPELKGYLSLCLCFYVGAAEDYFQKSL 121 (179)
Q Consensus 63 d~~~La~ia~--~~a~~~a~~~~~~i~~l-----~~~---~~d~~~k~aL~~C~~~y~~av~~~L~~A~ 121 (179)
+.++...-.| ++|..+|.+.+..|+.- ... ..|+.++.++..|.+.|-++- .-+.+++
T Consensus 17 ~~~~~~m~qVkqqlAvAnAqeLv~kisekCf~KCit~PGssl~~~e~~Cis~CmdRyMdaw-niVSrty 84 (97)
T KOG1733|consen 17 TTEGELMNQVKQQLAVANAQELVSKISEKCFDKCITKPGSSLDSSEKSCISRCMDRYMDAW-NIVSRTY 84 (97)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCcchHHHHHHHHHHHHHHH-HHHHHHH
Confidence 4554544444 56667777666665531 112 367889999999999999986 7666665
No 27
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=74.46 E-value=2.3 Score=28.79 Aligned_cols=20 Identities=20% Similarity=0.285 Sum_probs=12.3
Q ss_pred CCCCcchHHHHHHHHHHHHh
Q 043247 1 MKNKTPCALTTIYLLIIFVS 20 (179)
Q Consensus 1 ~~~~~~~~~~~~~~l~l~~~ 20 (179)
|.+++..+|.+||.++|+++
T Consensus 1 MaSK~~llL~l~LA~lLlis 20 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLIS 20 (95)
T ss_pred CchhHHHHHHHHHHHHHHHH
Confidence 77777555555555555554
No 28
>KOG4841 consensus Dolichol-phosphate mannosyltransferase, subunit 3 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=61.64 E-value=7.6 Score=25.72 Aligned_cols=26 Identities=12% Similarity=0.069 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 043247 101 YLSLCLCFYVGAAEDYFQKSLKSLDTN 127 (179)
Q Consensus 101 aL~~C~~~y~~av~~~L~~A~~~l~~~ 127 (179)
-.+||.|.|-+-+ .++++|.++++.+
T Consensus 66 TfnDc~eA~veL~-~~IkEAr~~L~rk 91 (95)
T KOG4841|consen 66 TFNDCEEAAVELQ-SQIKEARADLARK 91 (95)
T ss_pred ccCCcHHHHHHHH-HHHHHHHHHHHHc
Confidence 5689999999998 9999999999864
No 29
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=53.50 E-value=7.6 Score=26.07 Aligned_cols=27 Identities=7% Similarity=0.007 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 043247 101 YLSLCLCFYVGAAEDYFQKSLKSLDTNS 128 (179)
Q Consensus 101 aL~~C~~~y~~av~~~L~~A~~~l~~~~ 128 (179)
.++||-|.|.+-. .++++|.++++.+.
T Consensus 62 tFnDcpeA~~eL~-~eI~eAK~dLr~kG 88 (91)
T PF08285_consen 62 TFNDCPEAAKELQ-KEIKEAKADLRKKG 88 (91)
T ss_pred ccCCCHHHHHHHH-HHHHHHHHHHHHcC
Confidence 5688999999997 99999999998653
No 30
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=52.39 E-value=8.8 Score=17.70 Aligned_cols=12 Identities=17% Similarity=0.531 Sum_probs=6.5
Q ss_pred HHHHHHHHHHhc
Q 043247 10 TTIYLLIIFVSC 21 (179)
Q Consensus 10 ~~~~~l~l~~~~ 21 (179)
.+|+.++|++++
T Consensus 5 vIIlvvLLliSf 16 (19)
T PF13956_consen 5 VIILVVLLLISF 16 (19)
T ss_pred hHHHHHHHhccc
Confidence 455555555554
No 31
>PF02953 zf-Tim10_DDP: Tim10/DDP family zinc finger; InterPro: IPR004217 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc binding domain with four conserved cysteine residues. Members of this family include subunits 8, 9, 10 and 13 of the mitochondrial inner membrane translocase complex, which are involved in mitochondrial protein import [, ]. Defects in TIM8 are the cause of 2 human syndromes: Mohr-Tranebjaerg syndrome (MTS) [MIM:304700]; also known as dystonia-deafness syndrome (DDS) or X-linked progressive deafness type 1 (DFN-1). It is a recessive neurodegenerative syndrome characterised by postlingual progressive sensorineural deafness as the first presenting symptom in early childhood, followed by progressive dystonia, spasticity, dysphagia, mental deterioration, paranoia and cortical blindness. Jensen syndrome [MIM:311150]; also known as opticoacoustic nerve atrophy with dementia. This X-linked disease is characterised by deafness, blindness and muscle weakness. The small alpha helical proteins Tim8 and Tim13 assemble into a hexameric complex which can bind Tim23 as its substrate and chaperone the hydrophobic Tim23 across the aqueous membrane space []. More information on zinc fingers can be found at Protein of the Month: Zinc Fingers [].; GO: 0006626 protein targeting to mitochondrion, 0045039 protein import into mitochondrial inner membrane, 0042719 mitochondrial intermembrane space protein transporter complex; PDB: 2BSK_B 3CJH_A 3DXR_A.
Probab=52.17 E-value=47 Score=20.33 Aligned_cols=29 Identities=10% Similarity=0.362 Sum_probs=22.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043247 93 ATDPELKGYLSLCLCFYVGAAEDYFQKSLK 122 (179)
Q Consensus 93 ~~d~~~k~aL~~C~~~y~~av~~~L~~A~~ 122 (179)
..++.++.+++.|.+-|-++- ..+.+.+.
T Consensus 36 ~L~~~E~~Ci~~C~~ky~~~~-~~v~~~~~ 64 (66)
T PF02953_consen 36 SLSSKEESCIDNCVDKYIDTN-QFVSKRFQ 64 (66)
T ss_dssp S--HHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 457789999999999999986 77776654
No 32
>PF12554 MOZART1: Mitotic-spindle organizing gamma-tubulin ring associated; InterPro: IPR022214 This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important.
Probab=51.15 E-value=49 Score=19.41 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHH
Q 043247 79 AADTIRLIEKLEGEATDPELKGYLSLCLCFYVGAA 113 (179)
Q Consensus 79 a~~~~~~i~~l~~~~~d~~~k~aL~~C~~~y~~av 113 (179)
.-+....++++++.+.| +..|..|.++.+..+
T Consensus 4 ~~d~l~eiS~lLntgLd---~etL~ici~L~e~GV 35 (48)
T PF12554_consen 4 TLDVLHEISDLLNTGLD---RETLSICIELCENGV 35 (48)
T ss_pred HHHHHHHHHHHHcCCCC---HHHHHHHHHHHHCCC
Confidence 34566668888876566 469999999998876
No 33
>PF10510 PIG-S: Phosphatidylinositol-glycan biosynthesis class S protein; InterPro: IPR019540 Phosphatidylinositol-glycan biosynthesis class S protein (PIG-S) is one of several key, core components of the glycosylphosphatidylinositol (GPI) trans-amidase complex that mediates GPI anchoring in the endoplasmic reticulum. Anchoring occurs when a protein's C-terminal GPI attachment signal peptide is replaced with a pre-assembled GPI []. Mammalian GPI transamidase consists of at least five components: Gaa1, Gpi8, PIG-S, PIG-T, and PIG-U, all five of which are required for its function. It is possible that Gaa1, Gpi8, PIG-S, and PIG-T form a tightly associated core that is only weakly associated with PIG-U. The exact function of PIG-S is unclear [].
Probab=45.17 E-value=2.2e+02 Score=25.24 Aligned_cols=81 Identities=17% Similarity=0.142 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHccchhc-h
Q 043247 64 VKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCLCFYVGAAEDYFQKSLKSLDTNSFLEAARLARYGAK-K 142 (179)
Q Consensus 64 ~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~~~y~~av~~~L~~A~~~l~~~~~~~als~A~~~~~-C 142 (179)
...|.+.-+-.-+..+.++..-+.+|.++-.+- ..-++=.+.-..++ +.+.++.+.+..+++..++..|..... |
T Consensus 390 ld~l~r~r~~~~l~~a~~TL~SL~~L~~~i~~i---~I~~~V~~~v~~al-~~l~~a~~~l~~~~~~~al~~a~~a~~~a 465 (517)
T PF10510_consen 390 LDSLLRRRTVENLASASSTLQSLAKLLDSIPNI---VIPDEVAERVQQAL-EALEQAIDALNNGDLEEALAHAREAFALA 465 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---cccHHHHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 334555444444445555555555666541111 11233334555687 889999999999999888777777777 9
Q ss_pred HHhhhc
Q 043247 143 AQNFAS 148 (179)
Q Consensus 143 ~d~f~~ 148 (179)
|.+|-+
T Consensus 466 e~AFfd 471 (517)
T PF10510_consen 466 ERAFFD 471 (517)
T ss_pred HHHhCC
Confidence 999854
No 34
>PHA00442 host recBCD nuclease inhibitor
Probab=34.55 E-value=1.1e+02 Score=18.50 Aligned_cols=38 Identities=29% Similarity=0.223 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHH----HHHHHHH
Q 043247 73 DKTIAKAADTIRLIEKLEGEATDPELKGYLSLCL----CFYVGAA 113 (179)
Q Consensus 73 ~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~----~~y~~av 113 (179)
.+++..-.+...+|.+|.+ +...-.||+.|. +.|.+++
T Consensus 9 titRd~wnd~q~yidsLek---~~~~L~~Lea~GVDNW~Gy~eA~ 50 (59)
T PHA00442 9 TITRDAWNDMQGYIDSLEK---DNEFLKALRACGVDNWDGYMDAV 50 (59)
T ss_pred eecHHHHHHHHHHHHHHHH---hhHHHHHHHHcCCcchhhHHHHH
Confidence 4455566777888888875 556677888886 5666665
No 35
>KOG2459 consensus GPI transamidase complex, GPI17/PIG-S component, involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=34.42 E-value=1.8e+02 Score=25.89 Aligned_cols=79 Identities=14% Similarity=0.166 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHhccCCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHccchh
Q 043247 65 KGLARIMLDKTIAK---AADTIRLIEKLEGEATDPELKGYL-SLCLCFYVGAAEDYFQKSLKSLDTNSFLEAARLARYGA 140 (179)
Q Consensus 65 ~~La~ia~~~a~~~---a~~~~~~i~~l~~~~~d~~~k~aL-~~C~~~y~~av~~~L~~A~~~l~~~~~~~als~A~~~~ 140 (179)
.++.+.--+.+..| |+.|..-..+|..+-.+ -++ ++=.+.-..++ ..+..|.+++..|.+..+++......
T Consensus 406 we~drllr~~~v~nl~~AssTL~SL~kL~~qis~----mvI~dEV~~~V~~al-~~~~~a~~~l~~g~l~~a~~~s~eA~ 480 (536)
T KOG2459|consen 406 WELDRLLRRRIVENLMTASSTLQSLAKLVQQISN----MVIPDEVADRVTRAL-AALLQAIDALSPGRLNSALSLSNEAR 480 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----ccccHHHHHHHHHHH-HHHHHHHHHhcCCcchhHHHHHHHHH
Confidence 34444444444444 44444444455543111 122 22234445676 88888889999898888766666666
Q ss_pred c-hHHhhhc
Q 043247 141 K-KAQNFAS 148 (179)
Q Consensus 141 ~-C~d~f~~ 148 (179)
. ||.+|-+
T Consensus 481 ~lsE~AfFd 489 (536)
T KOG2459|consen 481 SLSESAFFD 489 (536)
T ss_pred HHHHhhcCC
Confidence 6 9999843
No 36
>TIGR00208 fliS flagellar biosynthetic protein FliS. The function of this protein in flagellar biosynthesis is unknown, but appears to be regulatory. The member of this family in Vibrio parahaemolyticus is designated FlaJ (creating a synonym for FliS) and was shown essential for flagellin biosynthesis.
Probab=30.85 E-value=95 Score=21.82 Aligned_cols=28 Identities=14% Similarity=0.089 Sum_probs=19.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 043247 59 YRANDVKGLARIMLDKTIAKAADTIRLIE 87 (179)
Q Consensus 59 ~~a~d~~~La~ia~~~a~~~a~~~~~~i~ 87 (179)
.++ +|.+|.....+-++.....+...+.
T Consensus 16 ~ta-sp~~Li~mLydg~i~~l~~a~~ai~ 43 (124)
T TIGR00208 16 NTA-SPGELTLMLYNGCLKFIRLAAQAIE 43 (124)
T ss_pred hcC-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345 7888888877777777666655554
No 37
>KOG3470 consensus Beta-tubulin folding cofactor A [Posttranslational modification, protein turnover, chaperones]
Probab=29.49 E-value=1.9e+02 Score=19.91 Aligned_cols=52 Identities=13% Similarity=0.205 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHhccCCCh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043247 74 KTIAKAADTIRLIEKLEGEATDP----ELKGYLSLCLCFYVGAAEDYFQKSLKSLDT 126 (179)
Q Consensus 74 ~a~~~a~~~~~~i~~l~~~~~d~----~~k~aL~~C~~~y~~av~~~L~~A~~~l~~ 126 (179)
.....+.....++.++...+.|| ..+..|++|..+.-++. ..|+++...|..
T Consensus 24 ~Yekev~~eeakvakl~~dg~d~ydlkkQeeVl~et~~mlPD~~-~RL~~a~~DLe~ 79 (107)
T KOG3470|consen 24 YYEKEVKEEEAKVAKLKDDGADPYDLKKQEEVLKETRMMLPDSQ-RRLRKAYEDLES 79 (107)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHChHHH-HHHHHHHHHHHH
Confidence 34455666667788887765666 46779999999999986 889988887764
No 38
>PF02203 TarH: Tar ligand binding domain homologue; InterPro: IPR003122 Methyl-accepting chemotaxis proteins (MCPs) are a family of bacterial receptors that mediate chemotaxis to diverse signals, responding to changes in the concentration of attractants and repellents in the environment by altering swimming behaviour []. Environmental diversity gives rise to diversity in bacterial signalling receptors, and consequently there are many genes encoding MCPs []. For example, there are four well-characterised MCPs found in Escherichia coli: Tar (taxis towards aspartate and maltose, away from nickel and cobalt), Tsr (taxis towards serine, away from leucine, indole and weak acids), Trg (taxis towards galactose and ribose) and Tap (taxis towards dipeptides). MCPs share similar topology and signalling mechanisms. MCPs either bind ligands directly or interact with ligand-binding proteins, transducing the signal to downstream signalling proteins in the cytoplasm. MCPs undergo two covalent modifications: deamidation and reversible methylation at a number of glutamate residues. Attractants increase the level of methylation, while repellents decrease it. The methyl groups are added by the methyl-transferase cheR and are removed by the methylesterase cheB. Most MCPs are homodimers that contain the following organisation: an N-terminal signal sequence that acts as a transmembrane domain in the mature protein; a poorly-conserved periplasmic receptor (ligand-binding) domain; a second transmembrane domain; and a highly-conserved C-terminal cytoplasmic domain that interacts with downstream signalling components. The C-terminal domain contains the glycosylated glutamate residues. This entry represents the ligand-binding domain found in a number of methyl-accepting chemotaxis receptors.; GO: 0004888 transmembrane signaling receptor activity, 0006935 chemotaxis, 0007165 signal transduction, 0016020 membrane; PDB: 2ASR_A 3ATP_A 2D4U_A 2LIG_A 1VLS_A 1LIH_A 1WAT_B 1VLT_B 1WAS_A 1JMW_A.
Probab=27.82 E-value=2.3e+02 Score=20.20 Aligned_cols=61 Identities=8% Similarity=0.091 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHH
Q 043247 72 LDKTIAKAADTIRLIEKLEGEAT-DPELKGYLSLCLCFYVGAAEDYFQKSLKSLDTNSFLEA 132 (179)
Q Consensus 72 ~~~a~~~a~~~~~~i~~l~~~~~-d~~~k~aL~~C~~~y~~av~~~L~~A~~~l~~~~~~~a 132 (179)
++.+......+...+........ ++..+...+.-.+.|+.-....+...++.+..+|+...
T Consensus 84 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~al~~~d~~~~ 145 (171)
T PF02203_consen 84 LARAEQNLEQAEQAFDAFKALPHASPEERALADELEASFDAYLQQALDPLLAALRAGDIAAF 145 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHCS---GTGGHHHHHHHHHHHHH-HHHHHHHHHHHHHTT-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCcchHHHHHHHHHHHHHHHHHhHHHHHHHHHCCCHHHH
Confidence 34444455555555666555433 33788899999999999334889999999999987754
No 39
>PF10157 DUF2365: Uncharacterized conserved protein (DUF2365); InterPro: IPR019314 This entry is found in a highly conserved family of proteins which have no known function.
Probab=25.24 E-value=2.8e+02 Score=20.35 Aligned_cols=24 Identities=13% Similarity=0.066 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 043247 100 GYLSLCLCFYVGAAEDYFQKSLKSL 124 (179)
Q Consensus 100 ~aL~~C~~~y~~av~~~L~~A~~~l 124 (179)
..=-+|.+.|.+++ +.+.+++++-
T Consensus 84 ~~Tv~~~~~y~~sv-~~~cdsvD~s 107 (149)
T PF10157_consen 84 AITVEHMETYKDSV-DKLCDSVDAS 107 (149)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 34468999999998 8888876543
No 40
>PF02561 FliS: Flagellar protein FliS; InterPro: IPR003713 The fliD operon of several bacteria consists of three flagellar genes, fliD, fliS, and fliT, and is transcribed in this order []. In Bacillus subtilis the operon encoding the flagellar proteins FliD, FliS, and FliT is sigma D-dependent [].; GO: 0009296 flagellum assembly, 0009288 bacterial-type flagellum; PDB: 1VH6_A 3IQC_B 3K1I_B 1ORJ_B 1ORY_A.
Probab=22.80 E-value=1.3e+02 Score=20.88 Aligned_cols=28 Identities=21% Similarity=0.170 Sum_probs=20.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 043247 59 YRANDVKGLARIMLDKTIAKAADTIRLIE 87 (179)
Q Consensus 59 ~~a~d~~~La~ia~~~a~~~a~~~~~~i~ 87 (179)
.++ +|.+|...-.+.++.....+...+.
T Consensus 14 ~ta-sp~~Li~~Lyd~ai~~l~~a~~a~~ 41 (122)
T PF02561_consen 14 ATA-SPHQLILMLYDGAIEFLKQAKEAIE 41 (122)
T ss_dssp GG--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcC-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345 7888888888888888877766544
No 41
>PLN03207 stomagen; Provisional
Probab=22.61 E-value=93 Score=21.21 Aligned_cols=15 Identities=33% Similarity=0.578 Sum_probs=6.7
Q ss_pred cchHHHHHHHHHHHH
Q 043247 5 TPCALTTIYLLIIFV 19 (179)
Q Consensus 5 ~~~~~~~~~~l~l~~ 19 (179)
|..+..+|+||..|+
T Consensus 9 tt~~~~lffLl~~ll 23 (113)
T PLN03207 9 TTRCLTLFFLLFFLL 23 (113)
T ss_pred cchhHHHHHHHHHHH
Confidence 334444444444444
No 42
>KOG4514 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.68 E-value=3.8e+02 Score=20.57 Aligned_cols=30 Identities=10% Similarity=0.086 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCHH
Q 043247 100 GYLSLCLCFYVGAAEDYFQKSLKSLDTNSFL 130 (179)
Q Consensus 100 ~aL~~C~~~y~~av~~~L~~A~~~l~~~~~~ 130 (179)
.---+|.+.|..+| +.|.+++++--.+.|.
T Consensus 157 ~lt~~~vq~yr~aV-~kl~d~~DanIK~~Y~ 186 (222)
T KOG4514|consen 157 SLTADNVQVYRNAV-NKLTDTLDANIKCQYQ 186 (222)
T ss_pred HhhhhHHHHHHHHH-HHHHHHhhhhhHHHHH
Confidence 34468999999999 9998888764444443
No 43
>PF10516 SHNi-TPR: SHNi-TPR; InterPro: IPR019544 The tetratrico peptide repeat region (TPR) is a structural motif present in a wide range of proteins [, , ]. It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. The X-ray structure of a domain containing three TPRs from protein phosphatase 5 revealed that TPR adopts a helix-turn-helix arrangement, with adjacent TPR motifs packing in a parallel fashion, resulting in a spiral of repeating anti-parallel alpha-helices []. The two helices are denoted helix A and helix B. The packing angle between helix A and helix B is ~24 degrees within a single TPR and generates a right-handed superhelical shape. Helix A interacts with helix B and with helix A' of the next TPR. Two protein surfaces are generated: the inner concave surface is contributed to mainly by residue on helices A, and the other surface presents residues from both helices A and B. This entry represents SHNi-TPR (Sim3-Hif1-NASP interrupted TPR), a sequence that is an interrupted form of TPR repeat [].
Probab=20.10 E-value=91 Score=17.14 Aligned_cols=17 Identities=18% Similarity=0.208 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 043247 107 CFYVGAAEDYFQKSLKSL 124 (179)
Q Consensus 107 ~~y~~av~~~L~~A~~~l 124 (179)
+.|..|+ .++.++++--
T Consensus 15 e~f~qA~-~D~~~aL~i~ 31 (38)
T PF10516_consen 15 ENFEQAI-EDYEKALEIQ 31 (38)
T ss_pred ccHHHHH-HHHHHHHHHH
Confidence 5677776 7777776543
Done!