Query 043247
Match_columns 179
No_of_seqs 138 out of 730
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 04:30:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043247.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043247hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xg2_B Pectinesterase inhibito 100.0 9E-33 3.1E-37 202.9 15.8 145 31-179 3-151 (153)
2 2cj4_A Invertase inhibitor; pr 100.0 3.3E-32 1.1E-36 199.5 15.9 142 30-178 3-149 (150)
3 1x91_A Invertase/pectin methyl 100.0 6.2E-32 2.1E-36 198.6 12.6 143 30-178 4-150 (153)
4 3cjh_B Mitochondrial import in 35.7 67 0.0023 18.8 4.6 30 93-123 33-62 (64)
5 3dxr_B Mitochondrial import in 33.7 75 0.0026 20.5 4.6 31 94-125 56-86 (95)
6 1vh6_A Flagellar protein FLIS; 33.4 53 0.0018 22.8 4.1 47 59-111 18-65 (145)
7 3iqc_A FLIS, flagellar protein 33.2 56 0.0019 22.3 4.1 27 60-87 22-48 (131)
8 3dxr_A Mitochondrial import in 31.6 99 0.0034 19.5 4.8 32 94-126 50-81 (89)
9 2bsk_B Mitochondrial import in 31.0 1E+02 0.0035 19.4 5.4 33 93-126 42-74 (90)
10 2bsk_A Mitochondrial import in 30.1 1.1E+02 0.0036 19.4 5.2 33 93-126 40-72 (89)
11 3w03_C DNA repair protein XRCC 24.5 1.9E+02 0.0063 21.0 5.8 46 63-110 138-183 (184)
12 3cjh_A Mitochondrial import in 23.2 1E+02 0.0036 18.1 3.6 30 94-124 25-54 (64)
13 2b0h_A Talin-1; vinculin, heli 23.1 1.9E+02 0.0064 19.9 7.0 26 93-119 105-130 (137)
14 2kvp_A Talin-1; VBS, vinculin, 21.2 2.3E+02 0.0077 20.1 6.0 24 93-117 133-156 (165)
15 1rgx_A Resistin, adipose TISS; 20.0 37 0.0013 22.5 1.1 10 1-11 1-10 (114)
No 1
>1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis}
Probab=100.00 E-value=9e-33 Score=202.86 Aligned_cols=145 Identities=30% Similarity=0.384 Sum_probs=135.7
Q ss_pred hhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHH
Q 043247 31 ADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCLCFYV 110 (179)
Q Consensus 31 ~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~~~y~ 110 (179)
.++|+.+|++| +||++|+++|+++|++..+ |+++|+++++++++.++..+..++.++.+...+|+.+.+|++|.++|+
T Consensus 3 ~~~i~~~C~~T-~~~~~C~~sL~~~~~~~~~-~~~~l~~~ai~~~~~~a~~~~~~~~~l~~~~~~~~~~~al~dC~e~y~ 80 (153)
T 1xg2_B 3 NHLISEICPKT-RNPSLCLQALESDPRSASK-DLKGLGQFSIDIAQASAKQTSKIIASLTNQATDPKLKGRYETCSENYA 80 (153)
T ss_dssp CHHHHHHGGGS-SCHHHHHHHHHTCTTGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred HhHHHHHhcCC-CChHHHHHHHhhCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 47899999999 9999999999999998877 999999999999999999999999999877678999999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCHHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHHHHhcC
Q 043247 111 GAAEDYFQKSLKSLDTNSFLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGVIALLT 179 (179)
Q Consensus 111 ~av~~~L~~A~~~l~~~~~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~Ii~~L~ 179 (179)
+++ ++|++|++.++.++|+++ +|+|+++++ |+|||.+.+ +.++||..++.++.+|++|+|+|+++|.
T Consensus 81 ~a~-~~L~~a~~~l~~~~~~d~~t~lSaAlt~~~tC~dgf~~~~-~~~~~l~~~~~~~~~l~s~aLai~~~l~ 151 (153)
T 1xg2_B 81 DAI-DSLGQAKQFLTSGDYNSLNIYASAAFDGAGTCEDSFEGPP-NIPTQLHQADLKLEDLCDIVLVISNLLP 151 (153)
T ss_dssp HHH-HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHCCSSS-CCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHH-HHHHHHHHHHHhCCHHHHHHHHHHHhcccchHHHHhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 998 999999999999999987 999999999 999997754 4678999999999999999999999873
No 2
>2cj4_A Invertase inhibitor; protein binding, four-helix bundle, helical hairpin; 1.63A {Nicotiana tabacum} SCOP: a.29.6.1 PDB: 2cj5_A 2cj6_A 2cj7_A 2cj8_A 1rj1_A 1rj4_A* 2xqr_B*
Probab=100.00 E-value=3.3e-32 Score=199.48 Aligned_cols=142 Identities=25% Similarity=0.252 Sum_probs=131.8
Q ss_pred hhhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHH
Q 043247 30 QADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCLCFY 109 (179)
Q Consensus 30 ~~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~~~y 109 (179)
..++|+.+|++| +||++|+++|+++|++..+ |+++|++++++++..++.++..++.++.+...+|+.+.+|++|.++|
T Consensus 3 ~~~~I~~~C~~T-~~~~~C~~sL~~~~~s~~a-d~~~la~~ai~~~~~~a~~~~~~i~~l~~~~~~~~~~~al~dC~e~y 80 (150)
T 2cj4_A 3 MNNLVETTCKNT-PNYQLCLKTLLSDKRSATG-DITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSY 80 (150)
T ss_dssp -CHHHHHHHHTS-SCHHHHHHHHHTSGGGTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCGGGHHHHHHHHHHH
T ss_pred chHHHHHHHcCC-CCccHHHHHHhcCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Confidence 457999999999 9999999999999999888 99999999999999999999999999987767899999999999999
Q ss_pred HHHHHH-HHHHHHHHHhhCCHHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHHHHhc
Q 043247 110 VGAAED-YFQKSLKSLDTNSFLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGVIALL 178 (179)
Q Consensus 110 ~~av~~-~L~~A~~~l~~~~~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~Ii~~L 178 (179)
++++ + +|++|++.++.++|+++ +|+|+++++ |+|||++ .++||..++.++.+|++|+|+|+++|
T Consensus 81 ~~a~-~~~L~~a~~~l~~~~~~~~~t~lsaAlt~~~tC~dgf~~----~~~pl~~~~~~~~~l~s~aLaii~~l 149 (150)
T 2cj4_A 81 KVIL-TASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKG----SKSPFSALNIAVHELSDVGRAIVRNL 149 (150)
T ss_dssp HHHH-HTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHTTTT----SCCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhhCC----CCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 9996 6 99999999999999987 999999999 9999953 26789999999999999999999876
No 3
>1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A
Probab=99.98 E-value=6.2e-32 Score=198.58 Aligned_cols=143 Identities=22% Similarity=0.328 Sum_probs=132.3
Q ss_pred hhhHHHHHHhcccCCccchhhccccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHH
Q 043247 30 QADLIEETCNKIFFLSEACVIFLRSDGRSYRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCLCFY 109 (179)
Q Consensus 30 ~~~~i~~~C~~T~~~~~~C~~~L~~~p~s~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~~~y 109 (179)
+.++|+.+|++| +||++|+++| +|++..+ |+++|+++++++++.++..+..++.++.+...+|+.+.+|++|.++|
T Consensus 4 ~~~~i~~~C~~T-~~~~~C~~sL--~p~~~~~-~~~~l~~~a~~~~~~~a~~~~~~~~~l~~~~~~~~~~~al~dC~e~y 79 (153)
T 1x91_A 4 DSSEMSTICDKT-LNPSFCLKFL--NTKFASA-NLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEY 79 (153)
T ss_dssp -CCSTTTGGGGS-SCHHHHHHHH--HHTTCCS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhCCC-CChhHHHHHh--CcCcccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 456889999999 9999999999 7877666 99999999999999999999999999987667999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhCCHHHH---HHHccchhc-hHHhhhcCCCCcccchhhchHhHHHHHhHHHHHHHhc
Q 043247 110 VGAAEDYFQKSLKSLDTNSFLEA---ARLARYGAK-KAQNFASLGFDSSSTVWKKSKDLENLGFVTQGVIALL 178 (179)
Q Consensus 110 ~~av~~~L~~A~~~l~~~~~~~a---ls~A~~~~~-C~d~f~~~~~~~~~~l~~~~~~~~~l~sial~Ii~~L 178 (179)
++++ ++|+++++.++.++|+++ +|+|+++++ |+|||++.+ +.++||..++.++.+|++|+|+|++.|
T Consensus 80 ~~a~-~~L~~a~~~l~~~~~~d~~t~lSaAlt~~~tC~dgf~~~~-~~~~~l~~~~~~~~~l~s~aLai~~~l 150 (153)
T 1x91_A 80 ESAI-GNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRLR-SVDSSVVNNSKTIKNLCGIALVISNML 150 (153)
T ss_dssp HHHH-HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHccHhHHHHHhccCC-CCcCHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9998 999999999999999987 999999999 999998754 468899999999999999999999987
No 4
>3cjh_B Mitochondrial import inner membrane translocase S TIM8; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}
Probab=35.74 E-value=67 Score=18.81 Aligned_cols=30 Identities=13% Similarity=0.204 Sum_probs=24.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043247 93 ATDPELKGYLSLCLCFYVGAAEDYFQKSLKS 123 (179)
Q Consensus 93 ~~d~~~k~aL~~C~~~y~~av~~~L~~A~~~ 123 (179)
..+..+..+++.|.+-|-++- ..+.+.+..
T Consensus 33 ~L~~~E~~Ci~~Cv~ky~~~~-~~v~~~~~~ 62 (64)
T 3cjh_B 33 NLSSQEEQCLSNCVNRFLDTN-IRIVNGLQN 62 (64)
T ss_dssp SCCHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred cCChhHhHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 357789999999999999985 777766543
No 5
>3dxr_B Mitochondrial import inner membrane translocase subunit TIM10; alpha-propeller, helix-turn-helix, intramolecular disulfides., chaperone; 2.50A {Saccharomyces cerevisiae}
Probab=33.67 E-value=75 Score=20.46 Aligned_cols=31 Identities=10% Similarity=0.244 Sum_probs=25.1
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043247 94 TDPELKGYLSLCLCFYVGAAEDYFQKSLKSLD 125 (179)
Q Consensus 94 ~d~~~k~aL~~C~~~y~~av~~~L~~A~~~l~ 125 (179)
.+..+..+++.|.+-|-++- ..+.+.+..+.
T Consensus 56 L~~~E~~Ci~~Cv~Ky~d~~-~~V~~~~q~~~ 86 (95)
T 3dxr_B 56 LNKNESSCLDRCVAKYFETN-VQVGENMQKMG 86 (95)
T ss_dssp CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHC-
T ss_pred CCchHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 46788999999999999995 87877776654
No 6
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=33.43 E-value=53 Score=22.83 Aligned_cols=47 Identities=13% Similarity=0.017 Sum_probs=30.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCh-hHHHHHHHHHHHHHH
Q 043247 59 YRANDVKGLARIMLDKTIAKAADTIRLIEKLEGEATDP-ELKGYLSLCLCFYVG 111 (179)
Q Consensus 59 ~~a~d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~-~~k~aL~~C~~~y~~ 111 (179)
.++ +|.+|...-.+-++.....+...+.. .|. .....+.-|.+....
T Consensus 18 ~tA-sP~~Li~mLydgal~~l~~A~~aie~-----~d~~~k~~~i~KA~~Ii~e 65 (145)
T 1vh6_A 18 NTA-TPGELTLMLYNGCLKFIRLAAQAIEN-----DDMERKNENLIKAQNIIQE 65 (145)
T ss_dssp --C-CTTHHHHHHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHH
T ss_pred hcC-CHHHHHHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHH
Confidence 345 89999999988888888877766652 333 233466666655433
No 7
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=33.24 E-value=56 Score=22.28 Aligned_cols=27 Identities=15% Similarity=0.204 Sum_probs=21.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 043247 60 RANDVKGLARIMLDKTIAKAADTIRLIE 87 (179)
Q Consensus 60 ~a~d~~~La~ia~~~a~~~a~~~~~~i~ 87 (179)
++ +|.+|...-.+-++.....+...+.
T Consensus 22 ta-sP~~Li~mLydgal~~l~~A~~ai~ 48 (131)
T 3iqc_A 22 VE-SPAKLIEMLYEGILRFSSQAKRCIE 48 (131)
T ss_dssp -C-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cC-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45 8999999999888888887777665
No 8
>3dxr_A Mitochondrial import inner membrane translocase subunit TIM9; alpha-propeller, helix-turn-helix, intramolecular disulfides., chaperone; 2.50A {Saccharomyces cerevisiae}
Probab=31.56 E-value=99 Score=19.48 Aligned_cols=32 Identities=3% Similarity=0.115 Sum_probs=26.4
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043247 94 TDPELKGYLSLCLCFYVGAAEDYFQKSLKSLDT 126 (179)
Q Consensus 94 ~d~~~k~aL~~C~~~y~~av~~~L~~A~~~l~~ 126 (179)
.+..+..++..|.+-|-++- ..+.+.+..+..
T Consensus 50 L~~~E~~Ci~~Cv~Ky~~~~-~~v~~~~~~~~~ 81 (89)
T 3dxr_A 50 LTNKEQTCIMKCSEKFLKHS-ERVGQRFQEQNA 81 (89)
T ss_dssp CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHTTC
T ss_pred CCchHhHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 57788999999999999995 888887776543
No 9
>2bsk_B Mitochondrial import inner membrane translocase subunit TIM10; protein transport, mitochondrial protein import, TIM complex; 3.3A {Homo sapiens} SCOP: g.83.1.1
Probab=30.95 E-value=1e+02 Score=19.43 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=27.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043247 93 ATDPELKGYLSLCLCFYVGAAEDYFQKSLKSLDT 126 (179)
Q Consensus 93 ~~d~~~k~aL~~C~~~y~~av~~~L~~A~~~l~~ 126 (179)
..+..+..+++.|.+-|-++- ..+.+.+.....
T Consensus 42 ~L~~~E~~Ci~~Cv~Ky~d~~-~~V~~~~~~~~~ 74 (90)
T 2bsk_B 42 ELSKGESVCLDRCVSKYLDIH-ERMGKKLTELSM 74 (90)
T ss_dssp SCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred cCChhHhHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 367889999999999999995 888887776653
No 10
>2bsk_A Mitochondrial import inner membrane translocase subunit TIM9 A; protein transport, mitochondrial protein import, TIM complex; 3.3A {Homo sapiens} SCOP: g.83.1.1
Probab=30.13 E-value=1.1e+02 Score=19.36 Aligned_cols=33 Identities=15% Similarity=0.244 Sum_probs=27.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043247 93 ATDPELKGYLSLCLCFYVGAAEDYFQKSLKSLDT 126 (179)
Q Consensus 93 ~~d~~~k~aL~~C~~~y~~av~~~L~~A~~~l~~ 126 (179)
..+..+..++..|.+-|-++- ..+.+.+..+..
T Consensus 40 ~L~~~E~~Ci~~Cv~Ky~d~~-~~V~~~~~~~~~ 72 (89)
T 2bsk_A 40 EVKPEETTCSEHCLQKYLKMT-QRISMRFQEYHI 72 (89)
T ss_dssp SCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHS
T ss_pred cCCchHhHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 357889999999999999995 888888777654
No 11
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=24.54 E-value=1.9e+02 Score=21.05 Aligned_cols=46 Identities=11% Similarity=0.028 Sum_probs=37.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHH
Q 043247 63 DVKGLARIMLDKTIAKAADTIRLIEKLEGEATDPELKGYLSLCLCFYV 110 (179)
Q Consensus 63 d~~~La~ia~~~a~~~a~~~~~~i~~l~~~~~d~~~k~aL~~C~~~y~ 110 (179)
||.....-.++-++....+....+..|.+ .+.+.+.-.++|.+.++
T Consensus 138 ~p~e~i~elid~~ld~~~~L~~~n~~Lqk--eNeRL~~E~n~~l~qlE 183 (184)
T 3w03_C 138 NPAEVIRELICYCLDTIAENQAKNEHLQK--ENERLLRDWNDVQGRFE 183 (184)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhc
Confidence 89988888889999998888888888876 56677777888877654
No 12
>3cjh_A Mitochondrial import inner membrane translocase S TIM13; cyclic heterohexamer, chaperone, M binding, mitochondrion, protein transport; 2.60A {Saccharomyces cerevisiae}
Probab=23.22 E-value=1e+02 Score=18.06 Aligned_cols=30 Identities=17% Similarity=0.231 Sum_probs=24.2
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043247 94 TDPELKGYLSLCLCFYVGAAEDYFQKSLKSL 124 (179)
Q Consensus 94 ~d~~~k~aL~~C~~~y~~av~~~L~~A~~~l 124 (179)
.+..+..+++.|.+-|-++- ..+.+.+...
T Consensus 25 L~~~E~~Ci~~Cv~Ky~~~~-~~v~~~~~~~ 54 (64)
T 3cjh_A 25 YATRNDACIDQCLAKYMRSW-NVISKAYISR 54 (64)
T ss_dssp CCSCCHHHHHHHHHHHHHHH-HHHHHHHHTT
T ss_pred CChhHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 46678899999999999995 8777776544
No 13
>2b0h_A Talin-1; vinculin, helical bundle, VBS, structural protein; NMR {Mus musculus} SCOP: a.24.9.2
Probab=23.15 E-value=1.9e+02 Score=19.91 Aligned_cols=26 Identities=15% Similarity=-0.028 Sum_probs=17.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHH
Q 043247 93 ATDPELKGYLSLCLCFYVGAAEDYFQK 119 (179)
Q Consensus 93 ~~d~~~k~aL~~C~~~y~~av~~~L~~ 119 (179)
+.|+..+.-|.+|...-.+-| ..+-.
T Consensus 105 p~d~~~q~eL~~~aR~VsEkV-s~vLA 130 (137)
T 2b0h_A 105 PSDVYTKKELIECARRVSEKV-SHVLA 130 (137)
T ss_dssp TTCHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 567777888888877666655 54433
No 14
>2kvp_A Talin-1; VBS, vinculin, helical bundle, cytoplasm, cytoskeleto membrane, phosphoprotein, structural protein, acetylation, membrane; NMR {Mus musculus}
Probab=21.23 E-value=2.3e+02 Score=20.14 Aligned_cols=24 Identities=17% Similarity=-0.003 Sum_probs=15.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHH
Q 043247 93 ATDPELKGYLSLCLCFYVGAAEDYF 117 (179)
Q Consensus 93 ~~d~~~k~aL~~C~~~y~~av~~~L 117 (179)
+.|+..+.-|.+|...-.+-| ..+
T Consensus 133 p~d~~~q~eL~~~aR~VsekV-s~v 156 (165)
T 2kvp_A 133 PSDVYTKKELIECARRVSEKV-SHV 156 (165)
T ss_dssp TTCHHHHHHHHHHHHHHHHHH-HHH
T ss_pred CccHHHHHHHHHHHHHHHHHH-HHH
Confidence 567777777777776655555 444
No 15
>1rgx_A Resistin, adipose TISS; hormone, glucose uptake, resistin/FIZZ family, structural GE PSI, protein structure initiative; 1.79A {Mus musculus} SCOP: g.77.1.1 PDB: 1rfx_A*
Probab=20.01 E-value=37 Score=22.52 Aligned_cols=10 Identities=40% Similarity=0.358 Sum_probs=0.0
Q ss_pred CCCCcchHHHH
Q 043247 1 MKNKTPCALTT 11 (179)
Q Consensus 1 ~~~~~~~~~~~ 11 (179)
||+.+ |++++
T Consensus 1 MK~~~-c~Lli 10 (114)
T 1rgx_A 1 MKNLS-FPLLF 10 (114)
T ss_dssp -----------
T ss_pred CCchh-HHHHH
Confidence 67665 44443
Done!