BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043248
(1092 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 175/266 (65%), Gaps = 2/266 (0%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M++Y +++IG G+FG AILV + ++YV+K+I ++R + + R + +E+A++A ++H
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+++E++ E G + IV YCEGGD+ + + G F E+++ WF Q+ LA+ ++
Sbjct: 83 PNIVQYRESFEENGS-LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIP 183
H +LHRD+K NIFLTKD V+LGDFG+A+ L + +LA + +GTP Y+ PE+ + P
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKP 201
Query: 184 YGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGML 243
Y KSDIW+LGC +YE+ + AF+A M L+ KI S P+ YS L++L+ +
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLF 261
Query: 244 RKNPEHRPSASELLKHPFLQHFVDQY 269
++NP RPS + +L+ F+ ++++
Sbjct: 262 KRNPRDRPSVNSILEKGFIAKRIEKF 287
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 179 bits (455), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 148/271 (54%), Gaps = 9/271 (3%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
M SR + YE++ IG G++G + +++ K V K++ TE ++ E+ L+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 61 RVQHPYIVEFKEAWVEK-GCYVCIVTGYCEGGDMAELMKKSNG--AYFPEEKLCKWFAQL 117
++HP IV + + +++ + IV YCEGGD+A ++ K Y EE + + QL
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 118 LLAVDYLH-----SNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP 171
LA+ H + VLHRDLK +N+FL Q+V+LGDFGLA+ L D D A VGTP
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTP 180
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY 231
YM PE + + Y KSDIWSLGC +YE+ A P F AF L KI +P Y
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY 240
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S L +I ML HRPS E+L++P +
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 148/271 (54%), Gaps = 9/271 (3%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
M SR + YE++ IG G++G + +++ K V K++ TE ++ E+ L+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 61 RVQHPYIVEFKEAWVEK-GCYVCIVTGYCEGGDMAELMKKSNG--AYFPEEKLCKWFAQL 117
++HP IV + + +++ + IV YCEGGD+A ++ K Y EE + + QL
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 118 LLAVDYLH-----SNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP 171
LA+ H + VLHRDLK +N+FL Q+V+LGDFGLA+ L D A + VGTP
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTP 180
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY 231
YM PE + + Y KSDIWSLGC +YE+ A P F AF L KI +P Y
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY 240
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S L +I ML HRPS E+L++P +
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 148/271 (54%), Gaps = 9/271 (3%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
M SR + YE++ IG G++G + +++ K V K++ TE ++ E+ L+
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 61 RVQHPYIVEFKEAWVEK-GCYVCIVTGYCEGGDMAELMKKSNG--AYFPEEKLCKWFAQL 117
++HP IV + + +++ + IV YCEGGD+A ++ K Y EE + + QL
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 118 LLAVDYLH-----SNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP 171
LA+ H + VLHRDLK +N+FL Q+V+LGDFGLA+ L D A + VGTP
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTP 180
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY 231
YM PE + + Y KSDIWSLGC +YE+ A P F AF L KI +P Y
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY 240
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S L +I ML HRPS E+L++P +
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 146/265 (55%), Gaps = 16/265 (6%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
+EI+ ++G GAFG ++ K I ++E E+ ++A HPYI
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIE--TKSEEELEDYIVEIEILATCDHPYI 78
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDM-AELMKKSNGAYFPE-EKLCKWFAQLLLAVDYLH 125
V+ A+ G + I+ +C GG + A +++ G P+ + +C+ Q+L A+++LH
Sbjct: 79 VKLLGAYYHDG-KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR---QMLEALNFLH 134
Query: 126 SNYVLHRDLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPEL-----L 179
S ++HRDLK N+ +T + D+RL DFG+ AK LK S +GTP +M PE+ +
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL--PSCYSPSLKT 237
D PY +K+DIWSLG + EMA P + ++ KI +S L PS +S +
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRD 254
Query: 238 LIKGMLRKNPEHRPSASELLKHPFL 262
+K L KNPE RPSA++LL+HPF+
Sbjct: 255 FLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 146/265 (55%), Gaps = 16/265 (6%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
+EI+ ++G GAFG ++ K I ++E E+ ++A HPYI
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIE--TKSEEELEDYIVEIEILATCDHPYI 70
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDM-AELMKKSNGAYFPE-EKLCKWFAQLLLAVDYLH 125
V+ A+ G + I+ +C GG + A +++ G P+ + +C+ Q+L A+++LH
Sbjct: 71 VKLLGAYYHDG-KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR---QMLEALNFLH 126
Query: 126 SNYVLHRDLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPEL-----L 179
S ++HRDLK N+ +T + D+RL DFG+ AK LK S +GTP +M PE+ +
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 186
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL--PSCYSPSLKT 237
D PY +K+DIWSLG + EMA P + ++ KI +S L PS +S +
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRD 246
Query: 238 LIKGMLRKNPEHRPSASELLKHPFL 262
+K L KNPE RPSA++LL+HPF+
Sbjct: 247 FLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 142/257 (55%), Gaps = 8/257 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTE-RCRRSAHQEMALIARVQ 63
+ + I ++IGRG F + LKK+++ + + R +E+ L+ ++
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN 90
Query: 64 HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMK--KSNGAYFPEEKLCKWFAQLLLAV 121
HP ++++ +++E + IV + GD++ ++K K PE + K+F QL A+
Sbjct: 91 HPNVIKYYASFIEDN-ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 122 DYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS-SVVGTPNYMCPELLA 180
+++HS V+HRD+K +N+F+T V+LGD GL + + A+ S+VGTP YM PE +
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKA--FDMAGLISKINRSSIGPLPS-CYSPSLKT 237
+ Y FKSDIWSLGC +YEMAA + F ++ L KI + PLPS YS L+
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ 269
Query: 238 LIKGMLRKNPEHRPSAS 254
L+ + +PE RP +
Sbjct: 270 LVNMCINPDPEKRPDVT 286
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 140 bits (352), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 141/278 (50%), Gaps = 13/278 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQEMALIAR 61
M +Y +G+G F + K+ + V+ K L + ++ + S E+A+
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKS 98
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
+ +P++V F + E +V +V C + EL K+ PE + + Q + V
Sbjct: 99 LDNPHVVGF-HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY--FMRQTIQGV 155
Query: 122 DYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLA 180
YLH+N V+HRDLK N+FL D DV++GDFGLA ++ D + ++ GTPNY+ PE+L
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLC 215
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ F+ DIWSLGC +Y + +P F+ + +I ++ +P +P LI+
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-VPRHINPVASALIR 274
Query: 241 GMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPAAC 278
ML +P RPS +ELL F F Y P P +C
Sbjct: 275 RMLHADPTLRPSVAELLTDEF---FTSGYAPMRLPTSC 309
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 139 bits (350), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 140/278 (50%), Gaps = 13/278 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQEMALIAR 61
M +Y +G+G F + K+ + V+ K L + ++ + S E+A+
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKS 98
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
+ +P++V F + E +V +V C + EL K+ PE + + Q + V
Sbjct: 99 LDNPHVVGF-HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY--FMRQTIQGV 155
Query: 122 DYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLA 180
YLH+N V+HRDLK N+FL D DV++GDFGLA ++ D + + GTPNY+ PE+L
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC 215
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ F+ DIWSLGC +Y + +P F+ + +I ++ +P +P LI+
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-VPRHINPVASALIR 274
Query: 241 GMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPAAC 278
ML +P RPS +ELL F F Y P P +C
Sbjct: 275 RMLHADPTLRPSVAELLTDEF---FTSGYAPMRLPTSC 309
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 139 bits (350), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 140/278 (50%), Gaps = 13/278 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQEMALIAR 61
M +Y +G+G F + K+ + V+ K L + ++ + S E+A+
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKS 98
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
+ +P++V F + E +V +V C + EL K+ PE + + Q + V
Sbjct: 99 LDNPHVVGF-HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY--FMRQTIQGV 155
Query: 122 DYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLA 180
YLH+N V+HRDLK N+FL D DV++GDFGLA ++ D + + GTPNY+ PE+L
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLC 215
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ F+ DIWSLGC +Y + +P F+ + +I ++ +P +P LI+
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-VPRHINPVASALIR 274
Query: 241 GMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPAAC 278
ML +P RPS +ELL F F Y P P +C
Sbjct: 275 RMLHADPTLRPSVAELLTDEF---FTSGYAPMRLPTSC 309
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 140/278 (50%), Gaps = 13/278 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQEMALIAR 61
M +Y +G+G F + K+ + V+ K L + ++ + S E+A+
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKS 82
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
+ +P++V F + E +V +V C + EL K+ PE + + Q + V
Sbjct: 83 LDNPHVVGF-HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY--FMRQTIQGV 139
Query: 122 DYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLA 180
YLH+N V+HRDLK N+FL D DV++GDFGLA ++ D + + GTPNY+ PE+L
Sbjct: 140 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC 199
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ F+ DIWSLGC +Y + +P F+ + +I ++ +P +P LI+
Sbjct: 200 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-VPRHINPVASALIR 258
Query: 241 GMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPAAC 278
ML +P RPS +ELL F F Y P P +C
Sbjct: 259 RMLHADPTLRPSVAELLTDEF---FTSGYAPMRLPTSC 293
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 140/269 (52%), Gaps = 13/269 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
+G+G F ++ K+ + ++ K L + +R + S E+++ + H ++V F
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 104
Query: 71 KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVL 130
+ E +V +V C + EL K+ PE + + Q++L YLH N V+
Sbjct: 105 -HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY--YLRQIVLGCQYLHRNRVI 161
Query: 131 HRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVV-GTPNYMCPELLADIPYGFKSD 189
HRDLK N+FL +D +V++GDFGLA ++ D V+ GTPNY+ PE+L+ + F+ D
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 221
Query: 190 IWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEH 249
+WS+GC MY + +P F+ + +I ++ +P +P +LI+ ML+ +P
Sbjct: 222 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTA 280
Query: 250 RPSASELLKHPFLQHFVDQYRPTFPPAAC 278
RP+ +ELL F F Y P P C
Sbjct: 281 RPTINELLNDEF---FTSGYIPARLPITC 306
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 141/269 (52%), Gaps = 13/269 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
+G+G F ++ K+ + ++ K L + +R + S E+++ + H ++V F
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 86
Query: 71 KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVL 130
+ E +V +V C + EL K+ PE + + Q++L YLH N V+
Sbjct: 87 -HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY--YLRQIVLGCQYLHRNRVI 143
Query: 131 HRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIPYGFKSD 189
HRDLK N+FL +D +V++GDFGLA ++ D + ++ GTPNY+ PE+L+ + F+ D
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 203
Query: 190 IWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEH 249
+WS+GC MY + +P F+ + +I ++ +P +P +LI+ ML+ +P
Sbjct: 204 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTA 262
Query: 250 RPSASELLKHPFLQHFVDQYRPTFPPAAC 278
RP+ +ELL F F Y P P C
Sbjct: 263 RPTINELLNDEF---FTSGYIPARLPITC 288
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 140/269 (52%), Gaps = 13/269 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
+G+G F ++ K+ + ++ K L + +R + S E+++ + H ++V F
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 106
Query: 71 KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVL 130
+ E +V +V C + EL K+ PE + + Q++L YLH N V+
Sbjct: 107 -HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY--YLRQIVLGCQYLHRNRVI 163
Query: 131 HRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVV-GTPNYMCPELLADIPYGFKSD 189
HRDLK N+FL +D +V++GDFGLA ++ D V+ GTPNY+ PE+L+ + F+ D
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 223
Query: 190 IWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEH 249
+WS+GC MY + +P F+ + +I ++ +P +P +LI+ ML+ +P
Sbjct: 224 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTA 282
Query: 250 RPSASELLKHPFLQHFVDQYRPTFPPAAC 278
RP+ +ELL F F Y P P C
Sbjct: 283 RPTINELLNDEF---FTSGYIPARLPITC 308
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 141/269 (52%), Gaps = 13/269 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
+G+G F ++ K+ + ++ K L + +R + S E+++ + H ++V F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 82
Query: 71 KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVL 130
+ E +V +V C + EL K+ PE + + Q++L YLH N V+
Sbjct: 83 -HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY--YLRQIVLGCQYLHRNRVI 139
Query: 131 HRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIPYGFKSD 189
HRDLK N+FL +D +V++GDFGLA ++ D + ++ GTPNY+ PE+L+ + F+ D
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
Query: 190 IWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEH 249
+WS+GC MY + +P F+ + +I ++ +P +P +LI+ ML+ +P
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTA 258
Query: 250 RPSASELLKHPFLQHFVDQYRPTFPPAAC 278
RP+ +ELL F F Y P P C
Sbjct: 259 RPTINELLNDEF---FTSGYIPARLPITC 284
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 141/269 (52%), Gaps = 13/269 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
+G+G F ++ K+ + ++ K L + +R + S E+++ + H ++V F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 82
Query: 71 KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVL 130
+ E +V +V C + EL K+ PE + + Q++L YLH N V+
Sbjct: 83 -HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY--YLRQIVLGCQYLHRNRVI 139
Query: 131 HRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIPYGFKSD 189
HRDLK N+FL +D +V++GDFGLA ++ D + ++ GTPNY+ PE+L+ + F+ D
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
Query: 190 IWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEH 249
+WS+GC MY + +P F+ + +I ++ +P +P +LI+ ML+ +P
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTA 258
Query: 250 RPSASELLKHPFLQHFVDQYRPTFPPAAC 278
RP+ +ELL F F Y P P C
Sbjct: 259 RPTINELLNDEF---FTSGYIPARLPITC 284
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQ--EMALI 59
M+++E ++ +G+G FG ILV +A + Y +LKK + + E AH E ++
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTENRVL 205
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+HP++ K ++ + +C V Y GG++ S F E++ + A+++
Sbjct: 206 QNSRHPFLTALKYSF-QTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVS 262
Query: 120 AVDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKT-LKADDLASSVVGTPNYMCPE 177
A+DYLHS V++RDLK N+ L KD +++ DFGL K +K + GTP Y+ PE
Sbjct: 263 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 322
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+L D YG D W LG MYEM R F D L I I P P K+
Sbjct: 323 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAKS 381
Query: 238 LIKGMLRKNPEHR-----PSASELLKHPFLQHFVDQY------RPTFPPAACS 279
L+ G+L+K+P+ R A E+++H F V Q+ P F P S
Sbjct: 382 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTS 434
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 139/270 (51%), Gaps = 21/270 (7%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR----LARQTERCRRSAHQ--EMAL 58
M+ ++ ++ +G+G FG ILV +A + Y +K +R +A+ AH E +
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKD-----EVAHTVTESRV 61
Query: 59 IARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
+ +HP++ K A+ + +C V Y GG++ S F EE+ + A+++
Sbjct: 62 LQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIV 118
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTPNYMCPE 177
A++YLHS V++RD+K N+ L KD +++ DFGL K +D + GTP Y+ PE
Sbjct: 119 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 178
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+L D YG D W LG MYEM R F D L I I P SP K+
Sbjct: 179 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKS 237
Query: 238 LIKGMLRKNPEHR----PS-ASELLKHPFL 262
L+ G+L+K+P+ R PS A E+++H F
Sbjct: 238 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 136 bits (343), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 144/293 (49%), Gaps = 26/293 (8%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQ--EMALI 59
M+++E ++ +G+G FG ILV +A + Y +LKK + + E AH E ++
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTENRVL 202
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+HP++ K ++ + +C V Y GG++ S F E++ + A+++
Sbjct: 203 QNSRHPFLTALKYSF-QTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVS 259
Query: 120 AVDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKT-LKADDLASSVVGTPNYMCPE 177
A+DYLHS V++RDLK N+ L KD +++ DFGL K +K + GTP Y+ PE
Sbjct: 260 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 319
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+L D YG D W LG MYEM R F D L I I P P K+
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAKS 378
Query: 238 LIKGMLRKNPEHR-----PSASELLKHPFLQHFVDQY------RPTFPPAACS 279
L+ G+L+K+P+ R A E+++H F V Q+ P F P S
Sbjct: 379 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTS 431
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 137/266 (51%), Gaps = 13/266 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQ--EMALIARV 62
M+ ++ ++ +G+G FG ILV +A + Y +K +R + AH E ++
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTESRVLQNT 62
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
+HP++ K A+ + +C V Y GG++ S F EE+ + A+++ A++
Sbjct: 63 RHPFLTALKYAF-QTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALE 119
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTPNYMCPELLAD 181
YLHS V++RD+K N+ L KD +++ DFGL K +D + GTP Y+ PE+L D
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 179
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
YG D W LG MYEM R F D L I I P SP K+L+ G
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKSLLAG 238
Query: 242 MLRKNPEHR----PS-ASELLKHPFL 262
+L+K+P+ R PS A E+++H F
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 139/270 (51%), Gaps = 21/270 (7%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR----LARQTERCRRSAHQ--EMAL 58
M+ ++ ++ +G+G FG ILV +A + Y +K +R +A+ AH E +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKD-----EVAHTVTESRV 58
Query: 59 IARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
+ +HP++ K A+ + +C V Y GG++ S F EE+ + A+++
Sbjct: 59 LQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIV 115
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTPNYMCPE 177
A++YLHS V++RD+K N+ L KD +++ DFGL K +D + GTP Y+ PE
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+L D YG D W LG MYEM R F D L I I P SP K+
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKS 234
Query: 238 LIKGMLRKNPEHR----PS-ASELLKHPFL 262
L+ G+L+K+P+ R PS A E+++H F
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 136/266 (51%), Gaps = 13/266 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQ--EMALIARV 62
M+ ++ ++ +G+G FG ILV +A + Y +K +R + AH E ++
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTESRVLQNT 62
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
+HP++ K A+ + +C V Y GG++ S F EE+ + A+++ A++
Sbjct: 63 RHPFLTALKYAF-QTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALE 119
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTPNYMCPELLAD 181
YLHS V++RD+K N+ L KD +++ DFGL K +D GTP Y+ PE+L D
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
YG D W LG MYEM R F D L I I P SP K+L+ G
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKSLLAG 238
Query: 242 MLRKNPEHR----PS-ASELLKHPFL 262
+L+K+P+ R PS A E+++H F
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 138/270 (51%), Gaps = 21/270 (7%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR----LARQTERCRRSAHQ--EMAL 58
M+ ++ ++ +G+G FG ILV +A + Y +K +R +A+ AH E +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKD-----EVAHTVTESRV 58
Query: 59 IARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
+ +HP++ K A+ + +C V Y GG++ S F EE+ + A+++
Sbjct: 59 LQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIV 115
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTPNYMCPE 177
A++YLHS V++RD+K N+ L KD +++ DFGL K +D GTP Y+ PE
Sbjct: 116 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+L D YG D W LG MYEM R F D L I I P SP K+
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKS 234
Query: 238 LIKGMLRKNPEHR----PS-ASELLKHPFL 262
L+ G+L+K+P+ R PS A E+++H F
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 140/269 (52%), Gaps = 13/269 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
+G+G F ++ K+ + ++ K L + +R + S E+++ + H ++V F
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 80
Query: 71 KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVL 130
+ E +V +V C + EL K+ PE + + Q++L YLH N V+
Sbjct: 81 -HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY--YLRQIVLGCQYLHRNRVI 137
Query: 131 HRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVV-GTPNYMCPELLADIPYGFKSD 189
HRDLK N+FL +D +V++GDFGLA ++ D V+ GTPNY+ PE+L+ + F+ D
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 197
Query: 190 IWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEH 249
+WS+GC MY + +P F+ + +I ++ +P +P +LI+ ML+ +P
Sbjct: 198 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTA 256
Query: 250 RPSASELLKHPFLQHFVDQYRPTFPPAAC 278
RP+ +ELL F F Y P P C
Sbjct: 257 RPTINELLNDEF---FTSGYIPARLPITC 282
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 135 bits (340), Expect = 1e-31, Method: Composition-based stats.
Identities = 88/266 (33%), Positives = 136/266 (51%), Gaps = 13/266 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQ--EMALIARV 62
M+ ++ ++ +G+G FG ILV +A + Y +K +R + AH E ++
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTESRVLQNT 62
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
+HP++ K A+ + +C V Y GG++ S F EE+ + A+++ A++
Sbjct: 63 RHPFLTALKYAF-QTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALE 119
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTPNYMCPELLAD 181
YLHS V++RD+K N+ L KD +++ DFGL K +D GTP Y+ PE+L D
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
YG D W LG MYEM R F D L I I P SP K+L+ G
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKSLLAG 238
Query: 242 MLRKNPEHR----PS-ASELLKHPFL 262
+L+K+P+ R PS A E+++H F
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 13/265 (4%)
Query: 4 RMDQYEIMEQIGRGAFGAAILVNHRAEK----KKYVLKKI-RLARQTERCRRSAHQEMAL 58
+++ +++ +G+G+F +RAE + +K I + A + E+ +
Sbjct: 9 KIEDFKVGNLLGKGSFAGV----YRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKI 64
Query: 59 IARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
+++HP I+E + E YV +V C G+M +K F E + + Q++
Sbjct: 65 HCQLKHPSILELYN-YFEDSNYVYLVLEMCHNGEMNRYLKNRVKP-FSENEARHFMHQII 122
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA-DDLASSVVGTPNYMCPE 177
+ YLHS+ +LHRDL SN+ LT++ ++++ DFGLA LK + ++ GTPNY+ PE
Sbjct: 123 TGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE 182
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+ +G +SD+WSLGC Y + RP F + ++K+ + +PS S K
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY-EMPSFLSIEAKD 241
Query: 238 LIKGMLRKNPEHRPSASELLKHPFL 262
LI +LR+NP R S S +L HPF+
Sbjct: 242 LIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 135 bits (339), Expect = 2e-31, Method: Composition-based stats.
Identities = 88/266 (33%), Positives = 136/266 (51%), Gaps = 13/266 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQ--EMALIARV 62
M+ ++ ++ +G+G FG ILV +A + Y +K +R + AH E ++
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTESRVLQNT 67
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
+HP++ K A+ + +C V Y GG++ S F EE+ + A+++ A++
Sbjct: 68 RHPFLTALKYAF-QTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALE 124
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTPNYMCPELLAD 181
YLHS V++RD+K N+ L KD +++ DFGL K +D GTP Y+ PE+L D
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 184
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
YG D W LG MYEM R F D L I I P SP K+L+ G
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-RFPRTLSPEAKSLLAG 243
Query: 242 MLRKNPEHR----PS-ASELLKHPFL 262
+L+K+P+ R PS A E+++H F
Sbjct: 244 LLKKDPKQRLGGGPSDAKEVMEHRFF 269
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 143/293 (48%), Gaps = 26/293 (8%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQ--EMALI 59
M+++E ++ +G+G FG ILV +A + Y +LKK + + E AH E ++
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTENRVL 64
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+HP++ K ++ + +C V Y GG++ S F E++ + A+++
Sbjct: 65 QNSRHPFLTALKYSF-QTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVS 121
Query: 120 AVDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKT-LKADDLASSVVGTPNYMCPE 177
A+DYLHS V++RDLK N+ L KD +++ DFGL K +K GTP Y+ PE
Sbjct: 122 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 181
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+L D YG D W LG MYEM R F D L I I P P K+
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAKS 240
Query: 238 LIKGMLRKNPEHR-----PSASELLKHPFLQHFVDQY------RPTFPPAACS 279
L+ G+L+K+P+ R A E+++H F V Q+ P F P S
Sbjct: 241 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTS 293
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 143/293 (48%), Gaps = 26/293 (8%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQ--EMALI 59
M+++E ++ +G+G FG ILV +A + Y +LKK + + E AH E ++
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTENRVL 62
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+HP++ K ++ + +C V Y GG++ S F E++ + A+++
Sbjct: 63 QNSRHPFLTALKYSF-QTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVS 119
Query: 120 AVDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKT-LKADDLASSVVGTPNYMCPE 177
A+DYLHS V++RDLK N+ L KD +++ DFGL K +K GTP Y+ PE
Sbjct: 120 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 179
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+L D YG D W LG MYEM R F D L I I P P K+
Sbjct: 180 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAKS 238
Query: 238 LIKGMLRKNPEHR-----PSASELLKHPFLQHFVDQY------RPTFPPAACS 279
L+ G+L+K+P+ R A E+++H F V Q+ P F P S
Sbjct: 239 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTS 291
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 143/293 (48%), Gaps = 26/293 (8%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQ--EMALI 59
M+++E ++ +G+G FG ILV +A + Y +LKK + + E AH E ++
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTENRVL 63
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+HP++ K ++ + +C V Y GG++ S F E++ + A+++
Sbjct: 64 QNSRHPFLTALKYSF-QTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVS 120
Query: 120 AVDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKT-LKADDLASSVVGTPNYMCPE 177
A+DYLHS V++RDLK N+ L KD +++ DFGL K +K GTP Y+ PE
Sbjct: 121 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 180
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+L D YG D W LG MYEM R F D L I I P P K+
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAKS 239
Query: 238 LIKGMLRKNPEHR-----PSASELLKHPFLQHFVDQY------RPTFPPAACS 279
L+ G+L+K+P+ R A E+++H F V Q+ P F P S
Sbjct: 240 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTS 292
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 149/281 (53%), Gaps = 28/281 (9%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKY-VLKKIRLA-RQTERCRRSAHQEMALIARVQ 63
D +EI+ ++G GAFG ++A+ K+ VL ++ ++E E+ ++A
Sbjct: 37 DFWEIIGELGDGAFGKV----YKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD 92
Query: 64 HPYIVEFKEA-WVEKGCYVCIVTGYCEGGD----MAELMKKSNGAYFPEEKLCKWFAQLL 118
HP IV+ +A + E ++ I +C GG M EL + + + +CK Q L
Sbjct: 93 HPNIVKLLDAFYYENNLWILI--EFCAGGAVDAVMLELERPLTESQI--QVVCK---QTL 145
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPE 177
A++YLH N ++HRDLK NI T D D++L DFG+ AK + S +GTP +M PE
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPE 205
Query: 178 LLA-----DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL--PSC 230
++ D PY +K+D+WSLG + EMA P + ++ KI +S L PS
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 265
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRP 271
+S + K +K L KN + R + S+LL+HPF+ VD +P
Sbjct: 266 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT--VDSNKP 304
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 149/281 (53%), Gaps = 28/281 (9%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKY-VLKKIRLA-RQTERCRRSAHQEMALIARVQ 63
D +EI+ ++G GAFG ++A+ K+ VL ++ ++E E+ ++A
Sbjct: 37 DFWEIIGELGDGAFGKV----YKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD 92
Query: 64 HPYIVEFKEA-WVEKGCYVCIVTGYCEGGD----MAELMKKSNGAYFPEEKLCKWFAQLL 118
HP IV+ +A + E ++ I +C GG M EL + + + +CK Q L
Sbjct: 93 HPNIVKLLDAFYYENNLWILI--EFCAGGAVDAVMLELERPLTESQI--QVVCK---QTL 145
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPE 177
A++YLH N ++HRDLK NI T D D++L DFG+ AK + S +GTP +M PE
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPE 205
Query: 178 LLA-----DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL--PSC 230
++ D PY +K+D+WSLG + EMA P + ++ KI +S L PS
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 265
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRP 271
+S + K +K L KN + R + S+LL+HPF+ VD +P
Sbjct: 266 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT--VDSNKP 304
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 132 bits (333), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 144/273 (52%), Gaps = 20/273 (7%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
+IG G+ G + R+ K +KK+ L +Q R E+ ++ QH +VE
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 215
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
+++ G + +V + EGG + +++ + EE++ +L A+ LH+ V+HR
Sbjct: 216 SYL-VGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHR 271
Query: 133 DLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIW 191
D+K +I LT D V+L DFG A+ K +VGTP +M PEL++ +PYG + DIW
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 331
Query: 192 SLGCCMYEMAAHRPAFKAFDMAGLIS-KINRSSIGP-LPSCY--SPSLKTLIKGMLRKNP 247
SLG + EM P + F+ L + K+ R ++ P L + + SPSLK + +L ++P
Sbjct: 332 SLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 389
Query: 248 EHRPSASELLKHPFLQHFVDQYRPTFPPAACSP 280
R +A+ELLKHPFL PPA+ P
Sbjct: 390 AQRATAAELLKHPFLAK-------AGPPASIVP 415
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 132 bits (332), Expect = 1e-30, Method: Composition-based stats.
Identities = 85/290 (29%), Positives = 151/290 (52%), Gaps = 19/290 (6%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRA---EKKKYVLKKIRLARQTERCRRSAHQEMALIARVQ 63
Q+E+++ +G+G+FG LV + ++ Y +K ++ A R R E ++ V
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 64 HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDY 123
HP+IV+ A+ +G + ++ + GGD+ + S F EE + + A+L LA+D+
Sbjct: 85 HPFIVKLHYAFQTEG-KLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 124 LHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAK-TLKADDLASSVVGTPNYMCPELLADI 182
LHS +++RDLK NI L ++ ++L DFGL+K ++ + A S GT YM PE++
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGM 242
+ +D WS G M+EM F+ D ++ I ++ +G +P SP ++L++ +
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-MPQFLSPEAQSLLRML 260
Query: 243 LRKNPEHRPSA-----SELLKHPFL------QHFVDQYRPTFPPAACSPE 281
++NP +R A E+ +H F + + + P F PA PE
Sbjct: 261 FKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKPATGRPE 310
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 148/281 (52%), Gaps = 28/281 (9%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKY-VLKKIRLA-RQTERCRRSAHQEMALIARVQ 63
D +EI+ ++G GAFG ++A+ K+ VL ++ ++E E+ ++A
Sbjct: 37 DFWEIIGELGDGAFGKV----YKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD 92
Query: 64 HPYIVEFKEA-WVEKGCYVCIVTGYCEGGD----MAELMKKSNGAYFPEEKLCKWFAQLL 118
HP IV+ +A + E ++ I +C GG M EL + + + +CK Q L
Sbjct: 93 HPNIVKLLDAFYYENNLWILI--EFCAGGAVDAVMLELERPLTESQI--QVVCK---QTL 145
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPE 177
A++YLH N ++HRDLK NI T D D++L DFG+ AK + +GTP +M PE
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPE 205
Query: 178 LLA-----DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL--PSC 230
++ D PY +K+D+WSLG + EMA P + ++ KI +S L PS
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 265
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRP 271
+S + K +K L KN + R + S+LL+HPF+ VD +P
Sbjct: 266 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT--VDSNKP 304
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 144/273 (52%), Gaps = 20/273 (7%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
+IG G+ G + R+ K +KK+ L +Q R E+ ++ QH +VE
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 138
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
+++ G + +V + EGG + +++ + EE++ +L A+ LH+ V+HR
Sbjct: 139 SYL-VGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHR 194
Query: 133 DLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIW 191
D+K +I LT D V+L DFG A+ K +VGTP +M PEL++ +PYG + DIW
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 254
Query: 192 SLGCCMYEMAAHRPAFKAFDMAGLIS-KINRSSIGP-LPSCY--SPSLKTLIKGMLRKNP 247
SLG + EM P + F+ L + K+ R ++ P L + + SPSLK + +L ++P
Sbjct: 255 SLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 312
Query: 248 EHRPSASELLKHPFLQHFVDQYRPTFPPAACSP 280
R +A+ELLKHPFL PPA+ P
Sbjct: 313 AQRATAAELLKHPFLAK-------AGPPASIVP 338
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 129 bits (325), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 144/273 (52%), Gaps = 20/273 (7%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
+IG G+ G + R+ K +KK+ L +Q R E+ ++ QH +VE
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 93
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
+++ G + +V + EGG + +++ + EE++ +L A+ LH+ V+HR
Sbjct: 94 SYL-VGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 133 DLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIW 191
D+K +I LT D V+L DFG A+ K +VGTP +M PEL++ +PYG + DIW
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 209
Query: 192 SLGCCMYEMAAHRPAFKAFDMAGLIS-KINRSSIGP-LPSCY--SPSLKTLIKGMLRKNP 247
SLG + EM P + F+ L + K+ R ++ P L + + SPSLK + +L ++P
Sbjct: 210 SLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 267
Query: 248 EHRPSASELLKHPFLQHFVDQYRPTFPPAACSP 280
R +A+ELLKHPFL PPA+ P
Sbjct: 268 AQRATAAELLKHPFLAK-------AGPPASIVP 293
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 129 bits (325), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 144/273 (52%), Gaps = 20/273 (7%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
+IG G+ G + R+ K +KK+ L +Q R E+ ++ QH +VE
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 95
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
+++ G + +V + EGG + +++ + EE++ +L A+ LH+ V+HR
Sbjct: 96 SYL-VGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 133 DLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIW 191
D+K +I LT D V+L DFG A+ K +VGTP +M PEL++ +PYG + DIW
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 211
Query: 192 SLGCCMYEMAAHRPAFKAFDMAGLIS-KINRSSIGP-LPSCY--SPSLKTLIKGMLRKNP 247
SLG + EM P + F+ L + K+ R ++ P L + + SPSLK + +L ++P
Sbjct: 212 SLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 269
Query: 248 EHRPSASELLKHPFLQHFVDQYRPTFPPAACSP 280
R +A+ELLKHPFL PPA+ P
Sbjct: 270 AQRATAAELLKHPFLAK-------AGPPASIVP 295
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 129 bits (323), Expect = 1e-29, Method: Composition-based stats.
Identities = 82/284 (28%), Positives = 148/284 (52%), Gaps = 19/284 (6%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRA---EKKKYVLKKIRLARQTERCRRSAHQEMALIARVQ 63
Q+E+++ +G+G+FG LV + ++ Y +K ++ A R R E ++ V
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 64 HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDY 123
HP+IV+ A+ +G + ++ + GGD+ + S F EE + + A+L LA+D+
Sbjct: 85 HPFIVKLHYAFQTEG-KLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 124 LHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAK-TLKADDLASSVVGTPNYMCPELLADI 182
LHS +++RDLK NI L ++ ++L DFGL+K ++ + A S GT YM PE++
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGM 242
+ +D WS G M+EM F+ D ++ I ++ +G +P SP ++L++ +
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-MPQFLSPEAQSLLRML 260
Query: 243 LRKNPEHRPSA-----SELLKHPFL------QHFVDQYRPTFPP 275
++NP +R A E+ +H F + + + P F P
Sbjct: 261 FKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 304
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 129 bits (323), Expect = 1e-29, Method: Composition-based stats.
Identities = 82/284 (28%), Positives = 148/284 (52%), Gaps = 19/284 (6%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRA---EKKKYVLKKIRLARQTERCRRSAHQEMALIARVQ 63
Q+E+++ +G+G+FG LV + ++ Y +K ++ A R R E ++ V
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 64 HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDY 123
HP+IV+ A+ +G + ++ + GGD+ + S F EE + + A+L LA+D+
Sbjct: 86 HPFIVKLHYAFQTEG-KLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDH 142
Query: 124 LHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAK-TLKADDLASSVVGTPNYMCPELLADI 182
LHS +++RDLK NI L ++ ++L DFGL+K ++ + A S GT YM PE++
Sbjct: 143 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 202
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGM 242
+ +D WS G M+EM F+ D ++ I ++ +G +P SP ++L++ +
Sbjct: 203 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-MPQFLSPEAQSLLRML 261
Query: 243 LRKNPEHRPSA-----SELLKHPFL------QHFVDQYRPTFPP 275
++NP +R A E+ +H F + + + P F P
Sbjct: 262 FKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 305
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 144/273 (52%), Gaps = 20/273 (7%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
+IG G+ G + R+ K +KK+ L +Q R E+ ++ QH +VE
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 84
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
+++ G + +V + EGG + +++ + EE++ +L A+ LH+ V+HR
Sbjct: 85 SYL-VGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 133 DLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIW 191
D+K +I LT D V+L DFG A+ K +VGTP +M PEL++ +PYG + DIW
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 200
Query: 192 SLGCCMYEMAAHRPAFKAFDMAGLIS-KINRSSIGP-LPSCY--SPSLKTLIKGMLRKNP 247
SLG + EM P + F+ L + K+ R ++ P L + + SPSLK + +L ++P
Sbjct: 201 SLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 258
Query: 248 EHRPSASELLKHPFLQHFVDQYRPTFPPAACSP 280
R +A+ELLKHPFL PPA+ P
Sbjct: 259 AQRATAAELLKHPFLAK-------AGPPASIVP 284
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 138/269 (51%), Gaps = 13/269 (4%)
Query: 3 SRMDQYEI---MEQIGRGAFGAAI--LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA 57
SR+D E+ +++IG+G+FG + NH K+ V KI + E QE+
Sbjct: 13 SRVDPEELFTKLDRIGKGSFGEVYKGIDNH---TKEVVAIKIIDLEEAEDEIEDIQQEIT 69
Query: 58 LIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
++++ PYI + +++ K + I+ Y GG +L+K E + ++
Sbjct: 70 VLSQCDSPYITRYFGSYL-KSTKLWIIMEYLGGGSALDLLKPGP---LEETYIATILREI 125
Query: 118 LLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTPNYMCP 176
L +DYLHS +HRD+K +N+ L++ DV+L DFG+A L + + VGTP +M P
Sbjct: 126 LKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 185
Query: 177 ELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLK 236
E++ Y FK+DIWSLG E+A P ++ I ++S L +S K
Sbjct: 186 EVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFK 245
Query: 237 TLIKGMLRKNPEHRPSASELLKHPFLQHF 265
++ L K+P RP+A ELLKH F+ +
Sbjct: 246 EFVEACLNKDPRFRPTAKELLKHKFITRY 274
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 144/273 (52%), Gaps = 20/273 (7%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
+IG G+ G + R+ K +KK+ L +Q R E+ ++ QH +VE
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 88
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
+++ G + +V + EGG + +++ + EE++ +L A+ LH+ V+HR
Sbjct: 89 SYL-VGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 133 DLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIW 191
D+K +I LT D V+L DFG A+ K +VGTP +M PEL++ +PYG + DIW
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 204
Query: 192 SLGCCMYEMAAHRPAFKAFDMAGLIS-KINRSSIGP-LPSCY--SPSLKTLIKGMLRKNP 247
SLG + EM P + F+ L + K+ R ++ P L + + SPSLK + +L ++P
Sbjct: 205 SLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDP 262
Query: 248 EHRPSASELLKHPFLQHFVDQYRPTFPPAACSP 280
R +A+ELLKHPFL PPA+ P
Sbjct: 263 AQRATAAELLKHPFLAK-------AGPPASIVP 288
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 135/254 (53%), Gaps = 8/254 (3%)
Query: 11 MEQIGRGAFGAAIL-VNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
+E+IG+G+FG +++R ++ V KI + E QE+ ++++ Y+ +
Sbjct: 28 LERIGKGSFGEVFKGIDNRTQQ--VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTK 85
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
+ +++ KG + I+ Y GG +L++ F E ++ ++L +DYLHS
Sbjct: 86 YYGSYL-KGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDYLHSEKK 141
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTPNYMCPELLADIPYGFKS 188
+HRD+K +N+ L++ DV+L DFG+A L + ++ VGTP +M PE++ Y K+
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKA 201
Query: 189 DIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPE 248
DIWSLG E+A P ++ I +++ L ++ S K I L K+P
Sbjct: 202 DIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPS 261
Query: 249 HRPSASELLKHPFL 262
RP+A ELLKH F+
Sbjct: 262 FRPTAKELLKHKFI 275
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 126 bits (317), Expect = 6e-29, Method: Composition-based stats.
Identities = 81/290 (27%), Positives = 145/290 (50%), Gaps = 19/290 (6%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKK---YVLKKIRLARQTERCRRSAHQEMALIARVQ 63
+E+++ +G+G+FG LV Y +K ++ A R R E ++A V
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 64 HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDY 123
HP++V+ A+ +G + ++ + GGD+ + S F EE + + A+L L +D+
Sbjct: 89 HPFVVKLHYAFQTEG-KLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALGLDH 145
Query: 124 LHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAK-TLKADDLASSVVGTPNYMCPELLADI 182
LHS +++RDLK NI L ++ ++L DFGL+K + + A S GT YM PE++
Sbjct: 146 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQ 205
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGM 242
+ +D WS G M+EM F+ D ++ I ++ +G +P S ++L++ +
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLG-MPQFLSTEAQSLLRAL 264
Query: 243 LRKNPEHR----PSASELLKHPFLQHFVD-------QYRPTFPPAACSPE 281
++NP +R P +E +K +D + +P F PA P+
Sbjct: 265 FKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKPPFKPAVAQPD 314
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 138/272 (50%), Gaps = 18/272 (6%)
Query: 11 MEQIGRGAFGAAIL-VNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
+E+IG+G+FG +++R +K V KI + E QE+ ++++ PY+ +
Sbjct: 27 LEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 84
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
+ +++ K + I+ Y GG +L++ E ++ ++L +DYLHS
Sbjct: 85 YYGSYL-KDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSEKK 140
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTPNYMCPELLADIPYGFKS 188
+HRD+K +N+ L++ +V+L DFG+A L + + VGTP +M PE++ Y K+
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKA 200
Query: 189 DIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPE 248
DIWSLG E+A P ++ I +++ L YS LK ++ L K P
Sbjct: 201 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPS 260
Query: 249 HRPSASELLKHPF----------LQHFVDQYR 270
RP+A ELLKH F L +D+Y+
Sbjct: 261 FRPTAKELLKHKFILRNAKKTSYLTELIDRYK 292
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 126 bits (316), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 134/254 (52%), Gaps = 8/254 (3%)
Query: 11 MEQIGRGAFGAAIL-VNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
+E+IG+G+FG +++R +K V KI + E QE+ ++++ PY+ +
Sbjct: 32 LEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 89
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
+ +++ K + I+ Y GG +L++ E ++ ++L +DYLHS
Sbjct: 90 YYGSYL-KDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSEKK 145
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTPNYMCPELLADIPYGFKS 188
+HRD+K +N+ L++ +V+L DFG+A L + ++ VGTP +M PE++ Y K+
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 205
Query: 189 DIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPE 248
DIWSLG E+A P ++ I +++ L YS LK ++ L K P
Sbjct: 206 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPS 265
Query: 249 HRPSASELLKHPFL 262
RP+A ELLKH F+
Sbjct: 266 FRPTAKELLKHKFI 279
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 139/272 (51%), Gaps = 18/272 (6%)
Query: 11 MEQIGRGAFGAAIL-VNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
+E+IG+G+FG +++R +K V KI + E QE+ ++++ PY+ +
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 69
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
+ +++ K + I+ Y GG +L++ E ++ ++L +DYLHS
Sbjct: 70 YYGSYL-KDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSEKK 125
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTPNYMCPELLADIPYGFKS 188
+HRD+K +N+ L++ +V+L DFG+A L + ++ VGTP +M PE++ Y K+
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 185
Query: 189 DIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPE 248
DIWSLG E+A P ++ I +++ L YS LK ++ L K P
Sbjct: 186 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPS 245
Query: 249 HRPSASELLKHPF----------LQHFVDQYR 270
RP+A ELLKH F L +D+Y+
Sbjct: 246 FRPTAKELLKHKFILRNAKKTSYLTELIDRYK 277
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 138/272 (50%), Gaps = 18/272 (6%)
Query: 11 MEQIGRGAFGAAIL-VNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
+E+IG+G+FG +++R +K V KI + E QE+ ++++ PY+ +
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 69
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
+ +++ K + I+ Y GG +L++ E ++ ++L +DYLHS
Sbjct: 70 YYGSYL-KDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSEKK 125
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTPNYMCPELLADIPYGFKS 188
+HRD+K +N+ L++ +V+L DFG+A L + + VGTP +M PE++ Y K+
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKA 185
Query: 189 DIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPE 248
DIWSLG E+A P ++ I +++ L YS LK ++ L K P
Sbjct: 186 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPS 245
Query: 249 HRPSASELLKHPF----------LQHFVDQYR 270
RP+A ELLKH F L +D+Y+
Sbjct: 246 FRPTAKELLKHKFILRNAKKTSYLTELIDRYK 277
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 137/260 (52%), Gaps = 11/260 (4%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
++++E++G G++G+ H+ + +K++ + + + E++++ + P++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIK----EISIMQQCDSPHV 86
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSN 127
V++ ++ K + IV YC G ++++++ N E+++ L ++YLH
Sbjct: 87 VKYYGSYF-KNTDLWIVMEYCGAGSVSDIIRLRNKT-LTEDEIATILQSTLKGLEYLHFM 144
Query: 128 YVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA--SSVVGTPNYMCPELLADIPYG 185
+HRD+K NI L + +L DFG+A L D +A + V+GTP +M PE++ +I Y
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQL-TDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 186 FKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI--NRSSIGPLPSCYSPSLKTLIKGML 243
+DIWSLG EMA +P + I I N P +S + +K L
Sbjct: 204 CVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCL 263
Query: 244 RKNPEHRPSASELLKHPFLQ 263
K+PE R +A++LL+HPF++
Sbjct: 264 VKSPEQRATATQLLQHPFVR 283
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 143/284 (50%), Gaps = 24/284 (8%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRS----AHQEM 56
+ + + YE+++ IGRGAFG LV H++ +K Y +K L + E +RS +E
Sbjct: 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK---LLSKFEMIKRSDSAFFWEER 120
Query: 57 ALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQ 116
++A P++V+ A+ + Y+ +V Y GGD+ LM + PE+ + A+
Sbjct: 121 DIMAFANSPWVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAE 176
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA--SSVVGTPNYM 174
++LA+D +HS +HRD+K N+ L K ++L DFG + + + + VGTP+Y+
Sbjct: 177 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 236
Query: 175 CPELL----ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI---NRSSIGPL 227
PE+L D YG + D WS+G +YEM F A + G SKI S P
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 296
Query: 228 PSCYSPSLKTLIKGML--RKNPEHRPSASELLKHPFLQHFVDQY 269
+ S K LI L R+ R E+ +H F ++ DQ+
Sbjct: 297 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN--DQW 338
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 146/285 (51%), Gaps = 26/285 (9%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRS----AHQEM 56
++ + + Y++++ IGRGAFG LV H+A +K Y +K L + E +RS +E
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMK---LLSKFEMIKRSDSAFFWEER 126
Query: 57 ALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF-A 115
++A P++V+ A+ + Y+ +V Y GGD+ LM Y EK K++ A
Sbjct: 127 DIMAFANSPWVVQLFCAF-QDDKYLYMVMEYMPGGDLVNLMSN----YDVPEKWAKFYTA 181
Query: 116 QLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA--SSVVGTPNY 173
+++LA+D +HS ++HRD+K N+ L K ++L DFG + + + VGTP+Y
Sbjct: 182 EVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDY 241
Query: 174 MCPELL----ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI---NRSSIGP 226
+ PE+L D YG + D WS+G ++EM F A + G SKI S P
Sbjct: 242 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFP 301
Query: 227 LPSCYSPSLKTLIKGML--RKNPEHRPSASELLKHPFLQHFVDQY 269
+ S K LI L R+ R E+ +HPF ++ DQ+
Sbjct: 302 EDAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN--DQW 344
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 143/284 (50%), Gaps = 24/284 (8%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRS----AHQEM 56
+ + + YE+++ IGRGAFG LV H++ +K Y +K L + E +RS +E
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK---LLSKFEMIKRSDSAFFWEER 125
Query: 57 ALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQ 116
++A P++V+ A+ + Y+ +V Y GGD+ LM + PE+ + A+
Sbjct: 126 DIMAFANSPWVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAE 181
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA--SSVVGTPNYM 174
++LA+D +HS +HRD+K N+ L K ++L DFG + + + + VGTP+Y+
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 175 CPELL----ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI---NRSSIGPL 227
PE+L D YG + D WS+G +YEM F A + G SKI S P
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 301
Query: 228 PSCYSPSLKTLIKGML--RKNPEHRPSASELLKHPFLQHFVDQY 269
+ S K LI L R+ R E+ +H F ++ DQ+
Sbjct: 302 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN--DQW 343
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 143/284 (50%), Gaps = 24/284 (8%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRS----AHQEM 56
+ + + YE+++ IGRGAFG LV H++ +K Y +K L + E +RS +E
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK---LLSKFEMIKRSDSAFFWEER 125
Query: 57 ALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQ 116
++A P++V+ A+ + Y+ +V Y GGD+ LM + PE+ + A+
Sbjct: 126 DIMAFANSPWVVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAE 181
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA--SSVVGTPNYM 174
++LA+D +HS +HRD+K N+ L K ++L DFG + + + + VGTP+Y+
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 175 CPELL----ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI---NRSSIGPL 227
PE+L D YG + D WS+G +YEM F A + G SKI S P
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD 301
Query: 228 PSCYSPSLKTLIKGML--RKNPEHRPSASELLKHPFLQHFVDQY 269
+ S K LI L R+ R E+ +H F ++ DQ+
Sbjct: 302 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN--DQW 343
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 122 bits (307), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 130/267 (48%), Gaps = 10/267 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV 62
S D+Y++ E++G+GAF ++Y K I + + R + +E + +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
+HP IV ++ E+G + +V GG++ E + Y+ E Q+L +V+
Sbjct: 61 KHPNIVRLHDSISEEGFHY-LVFDLVTGGELFEDIVARE--YYSEADASHCIQQILESVN 117
Query: 123 YLHSNYVLHRDLKCSNIFL---TKDQDVRLGDFGLAKTLKADDLAS-SVVGTPNYMCPEL 178
+ H N ++HRDLK N+ L +K V+L DFGLA ++ D A GTP Y+ PE+
Sbjct: 118 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 179 LADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSL 235
L PYG D+W+ G +Y + P F D L +I + P +P
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 236 KTLIKGMLRKNPEHRPSASELLKHPFL 262
K LI ML NP R +ASE LKHP++
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWI 264
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 139/265 (52%), Gaps = 10/265 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCR-RSAHQEMALIARVQ 63
D +EI+ IG+G+FG +V KK Y +K + + ER R+ +E+ ++ ++
Sbjct: 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE 73
Query: 64 HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDY 123
HP++V ++ ++ + +V GGD+ ++++ +F EE + + +L++A+DY
Sbjct: 74 HPFLVNLWYSFQDEED-MFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDY 130
Query: 124 LHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLAD-- 181
L + ++HRD+K NI L + V + DF +A L + +++ GT YM PE+ +
Sbjct: 131 LQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRK 190
Query: 182 -IPYGFKSDIWSLGCCMYEMAAHRPAF--KAFDMAGLISKINRSSIGPLPSCYSPSLKTL 238
Y F D WSLG YE+ R + ++ + I +++ PS +S + +L
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSL 250
Query: 239 IKGMLRKNPEHRPS-ASELLKHPFL 262
+K +L NP+ R S S++ P++
Sbjct: 251 LKKLLEPNPDQRFSQLSDVQNFPYM 275
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 122 bits (305), Expect = 2e-27, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 131/269 (48%), Gaps = 27/269 (10%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
MD EI E IG G FG HR + K YV+K+++ + A +E+ +A++ H
Sbjct: 11 MDFKEI-ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE------KAEREVKALAKLDH 63
Query: 65 PYIVEFKEAW---------------VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK 109
IV + W K + I +C+ G + + ++K G +
Sbjct: 64 VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 110 LCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVG 169
+ F Q+ VDY+HS +++RDLK SNIFL + V++GDFGL +LK D G
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKG 183
Query: 170 TPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPS 229
T YM PE ++ YG + D+++LG + E+ AF+ + + + G +
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELL--HVCDTAFETSKFFTDLRD---GIISD 238
Query: 230 CYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ KTL++ +L K PE RP+ SE+L+
Sbjct: 239 IFDKKEKTLLQKLLSKKPEDRPNTSEILR 267
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 34/284 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
+E ++ +GRG FG ++ + Y +K+IRL + E R +E+ +A+++HP I
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPGI 65
Query: 68 VEFKEAWVEKG-----------CYVCIVTGYCEGGDMAELMKKSNGAYFPEEK---LC-K 112
V + AW+EK Y+ I C ++ + M NG EE+ +C
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM---NGRCTIEERERSVCLH 122
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV----- 167
F Q+ AV++LHS ++HRDLK SNIF T D V++GDFGL + D+ +V
Sbjct: 123 IFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 168 --------VGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI 219
VGT YM PE + Y K DI+SLG ++E+ P + ++ +
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY--PFSTQMERVRTLTDV 240
Query: 220 NRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PL + P +++ ML +P RP A ++++ +
Sbjct: 241 RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFE 284
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 139/288 (48%), Gaps = 41/288 (14%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
+E + +G+GAFG + + + + Y +KKIR TE + E+ L+A + H Y+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR---HTEEKLSTILSEVMLLASLNHQYV 64
Query: 68 VEFKEAWVEKGCYV------------CIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW-- 113
V + AW+E+ +V I YCE G + +L+ N +++ W
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRL 121
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAK-------TLKAD----- 161
F Q+L A+ Y+HS ++HRDLK NIF+ + ++V++GDFGLAK LK D
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 162 ---DLASSVVGTPNYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLIS 217
D +S +GT Y+ E+L Y K D++SLG +EM P + ++
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILK 239
Query: 218 KINRSSIGPLPSCYSPSLKT---LIKGMLRKNPEHRPSASELLKHPFL 262
K+ SI P +K +I+ ++ +P RP A LL +L
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 130/267 (48%), Gaps = 10/267 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV 62
S D+Y++ E++G+GAF ++Y K I + + R + +E + +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
+HP IV ++ E+G + +V GG++ E + Y+ E Q+L +V+
Sbjct: 61 KHPNIVRLHDSISEEGFHY-LVFDLVTGGELFEDIVARE--YYSEADASHCIQQILESVN 117
Query: 123 YLHSNYVLHRDLKCSNIFL---TKDQDVRLGDFGLAKTLKADDLAS-SVVGTPNYMCPEL 178
+ H N ++HRDLK N+ L +K V+L DFGLA ++ D A GTP Y+ PE+
Sbjct: 118 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 179 LADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSL 235
L PYG D+W+ G +Y + P F D L +I + P +P
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 236 KTLIKGMLRKNPEHRPSASELLKHPFL 262
K LI ML NP R +ASE LKHP++
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 146/282 (51%), Gaps = 31/282 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKY-VLKKIRLA-RQTERCRRSAHQEMALIARVQ 63
D +EI+ ++G FG ++A+ K+ VL ++ ++E E+ ++A
Sbjct: 12 DFWEIIGELGD--FGKV----YKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD 65
Query: 64 HPYIVEFKEA-WVEKGCYVCIVTGYCEGGD----MAELMKKSNGAYFPEEKLCKWFAQLL 118
HP IV+ +A + E ++ I +C GG M EL + + + +CK Q L
Sbjct: 66 HPNIVKLLDAFYYENNLWILI--EFCAGGAVDAVMLELERPLTESQI--QVVCK---QTL 118
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLA--KTLKADDLASSVVGTPNYMCP 176
A++YLH N ++HRDLK NI T D D++L DFG++ T S +GTP +M P
Sbjct: 119 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAP 178
Query: 177 ELLA-----DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL--PS 229
E++ D PY +K+D+WSLG + EMA P + ++ KI +S L PS
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPS 238
Query: 230 CYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRP 271
+S + K +K L KN + R + S+LL+HPF+ VD +P
Sbjct: 239 RWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT--VDSNKP 278
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 21/291 (7%)
Query: 8 YEIMEQIGRGAFGAAILVNHRA---EKKKYVLKKIRLARQTERCRRSAH--QEMALIARV 62
+E++ +G+G +G V K + +K ++ A + +AH E ++ V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
+HP+IV+ A+ + G + ++ Y GG++ M+ F E+ C + A++ +A+
Sbjct: 79 KHPFIVDLIYAF-QTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALG 135
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAK-TLKADDLASSVVGTPNYMCPELLAD 181
+LH +++RDLK NI L V+L DFGL K ++ + + GT YM PE+L
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMR 195
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ D WSLG MY+M P F + I KI + + LP + + L+K
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN-LPPYLTQEARDLLKK 254
Query: 242 MLRKNPEHRPS-----ASELLKHPFLQH------FVDQYRPTFPPAACSPE 281
+L++N R A E+ HPF +H + P F P S E
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEE 305
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 119 bits (299), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 127/263 (48%), Gaps = 9/263 (3%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D Y++ E++G+GAF H+ ++ K I + + R + +E + ++QHP
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 88
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
IV ++ +++ + +V GG++ E + ++ E Q+L ++ Y H
Sbjct: 89 NIVRLHDS-IQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCH 145
Query: 126 SNYVLHRDLKCSNIFLT---KDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
SN ++HR+LK N+ L K V+L DFGLA + + GTP Y+ PE+L
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 205
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSLKTLI 239
PY DIW+ G +Y + P F D L ++I + P +P K+LI
Sbjct: 206 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 265
Query: 240 KGMLRKNPEHRPSASELLKHPFL 262
ML NP+ R +A + LK P++
Sbjct: 266 DSMLTVNPKKRITADQALKVPWI 288
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 119 bits (299), Expect = 8e-27, Method: Composition-based stats.
Identities = 78/267 (29%), Positives = 131/267 (49%), Gaps = 10/267 (3%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR 61
E D Y+ + +G GAF IL + +K +K I E S E+A++ +
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KEALEGKEGSMENEIAVLHK 72
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
++HP IV + + E G ++ ++ GG++ + + + ++ E + Q+L AV
Sbjct: 73 IKHPNIVALDDIY-ESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAV 129
Query: 122 DYLHSNYVLHRDLKCSNIF---LTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPEL 178
YLH ++HRDLK N+ L +D + + DFGL+K + S+ GTP Y+ PE+
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEV 189
Query: 179 LADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSL 235
LA PY D WS+G Y + P F + A L +I ++ P S S
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 249
Query: 236 KTLIKGMLRKNPEHRPSASELLKHPFL 262
K I+ ++ K+PE R + + L+HP++
Sbjct: 250 KDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 136/272 (50%), Gaps = 21/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV-QH 64
D YE+ E IG G++ H+A ++ +K I ++ +R +E+ ++ R QH
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKII------DKSKRDPTEEIEILLRYGQH 75
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P I+ K+ + + G YV +VT +GG++ + + + +F E + + V+YL
Sbjct: 76 PNIITLKDVY-DDGKYVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYL 132
Query: 125 HSNYVLHRDLKCSNIFLTKD----QDVRLGDFGLAKTLKADD-LASSVVGTPNYMCPELL 179
H+ V+HRDLK SNI + + +R+ DFG AK L+A++ L + T N++ PE+L
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 192
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAF------DMAGLISKINRSSIGPLPSCYSP 233
Y DIWSLG +Y M F ++ I S G + S
Sbjct: 193 ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSD 252
Query: 234 SLKTLIKGMLRKNPEHRPSASELLKHPFLQHF 265
+ K L+ ML +P R +A+ +L+HP++ H+
Sbjct: 253 TAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW 284
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 131/263 (49%), Gaps = 10/263 (3%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D Y+ + +G GAF IL + +K +K I + E S E+A++ +++HP
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KKALEGKEGSMENEIAVLHKIKHP 76
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
IV + + E G ++ ++ GG++ + + + ++ E + Q+L AV YLH
Sbjct: 77 NIVALDDIY-ESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLH 133
Query: 126 SNYVLHRDLKCSNIF---LTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
++HRDLK N+ L +D + + DFGL+K + S+ GTP Y+ PE+LA
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSLKTLI 239
PY D WS+G Y + P F + A L +I ++ P S S K I
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 240 KGMLRKNPEHRPSASELLKHPFL 262
+ ++ K+PE R + + L+HP++
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 135/291 (46%), Gaps = 21/291 (7%)
Query: 8 YEIMEQIGRGAFGAAILVNHRA---EKKKYVLKKIRLARQTERCRRSAH--QEMALIARV 62
+E++ +G+G +G V K + +K ++ A + +AH E ++ V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
+HP+IV+ A+ + G + ++ Y GG++ M+ F E+ C + A++ +A+
Sbjct: 79 KHPFIVDLIYAF-QTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALG 135
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAK-TLKADDLASSVVGTPNYMCPELLAD 181
+LH +++RDLK NI L V+L DFGL K ++ + GT YM PE+L
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMR 195
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ D WSLG MY+M P F + I KI + + LP + + L+K
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN-LPPYLTQEARDLLKK 254
Query: 242 MLRKNPEHRPS-----ASELLKHPFLQH------FVDQYRPTFPPAACSPE 281
+L++N R A E+ HPF +H + P F P S E
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEE 305
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 119 bits (297), Expect = 1e-26, Method: Composition-based stats.
Identities = 82/282 (29%), Positives = 134/282 (47%), Gaps = 40/282 (14%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
MD EI E IG G FG HR + K YV+++++ + A +E+ +A++ H
Sbjct: 12 MDFKEI-ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE------KAEREVKALAKLDH 64
Query: 65 PYIVEFKEAW-------------VEKGCY---------------VCIVTGYCEGGDMAEL 96
IV + W +E Y + I +C+ G + +
Sbjct: 65 VNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW 124
Query: 97 MKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAK 156
++K G + + F Q+ VDY+HS ++HRDLK SNIFL + V++GDFGL
Sbjct: 125 IEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVT 184
Query: 157 TLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLI 216
+LK D + GT YM PE ++ YG + D+++LG + E+ AF+ +
Sbjct: 185 SLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL--HVCDTAFETSKFF 242
Query: 217 SKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ + G + + KTL++ +L K PE RP+ SE+L+
Sbjct: 243 TDLRD---GIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR 281
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 134/269 (49%), Gaps = 16/269 (5%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV-QHPY 66
+E++E +G G +G H K L I++ T QE+ ++ + H
Sbjct: 26 FELVELVGNGTYGQVYKGRH---VKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRN 82
Query: 67 IVEFKEAWVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
I + A+++K + +V +C G + +L+K + G EE + ++L +
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL 142
Query: 122 DYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTL-KADDLASSVVGTPNYMCPELLA 180
+LH + V+HRD+K N+ LT++ +V+L DFG++ L + ++ +GTP +M PE++A
Sbjct: 143 SHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 202
Query: 181 -----DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPS-CYSPS 234
D Y FKSD+WSLG EMA P + I R+ L S +S
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKK 262
Query: 235 LKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
++ I+ L KN RP+ +L+KHPF++
Sbjct: 263 FQSFIESCLVKNHSQRPATEQLMKHPFIR 291
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 28/281 (9%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR--LARQTERCRRSAHQEMALIARV 62
+ ++++ IGRG++ +LV + + Y ++ ++ L E ++
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
HP++V + + + V Y GGD+ M++ PEE + A++ LA++
Sbjct: 111 NHPFLVGLHSCF-QTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALN 167
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKT-LKADDLASSVVGTPNYMCPELLAD 181
YLH +++RDLK N+ L + ++L D+G+ K L+ D S+ GTPNY+ PE+L
Sbjct: 168 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG 227
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAG------------LISKINRSSIGPLPS 229
YGF D W+LG M+EM A R FD+ G L I I +P
Sbjct: 228 EDYGFSVDWWALGVLMFEMMAGR---SPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPR 283
Query: 230 CYSPSLKTLIKGMLRKNPEHR------PSASELLKHPFLQH 264
S +++K L K+P+ R +++ HPF ++
Sbjct: 284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 138/288 (47%), Gaps = 41/288 (14%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
+E + +G+GAFG + + + + Y +KKIR TE + E+ L+A + H Y+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR---HTEEKLSTILSEVMLLASLNHQYV 64
Query: 68 VEFKEAWVEKGCYV------------CIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW-- 113
V + AW+E+ +V I YCE + +L+ N +++ W
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSEN---LNQQRDEYWRL 121
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAK-------TLKAD----- 161
F Q+L A+ Y+HS ++HRDLK NIF+ + ++V++GDFGLAK LK D
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 162 ---DLASSVVGTPNYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLIS 217
D +S +GT Y+ E+L Y K D++SLG +EM P + ++
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILK 239
Query: 218 KINRSSIGPLPSCYSPSLKT---LIKGMLRKNPEHRPSASELLKHPFL 262
K+ SI P +K +I+ ++ +P RP A LL +L
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 28/281 (9%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR--LARQTERCRRSAHQEMALIARV 62
+ ++++ IGRG++ +LV + + Y +K ++ L E ++
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
HP++V + + + V Y GGD+ M++ PEE + A++ LA++
Sbjct: 64 NHPFLVGLHSCF-QTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALN 120
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKT-LKADDLASSVVGTPNYMCPELLAD 181
YLH +++RDLK N+ L + ++L D+G+ K L+ D S GTPNY+ PE+L
Sbjct: 121 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 180
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAG------------LISKINRSSIGPLPS 229
YGF D W+LG M+EM A R FD+ G L I I +P
Sbjct: 181 EDYGFSVDWWALGVLMFEMMAGR---SPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPR 236
Query: 230 CYSPSLKTLIKGMLRKNPEHR------PSASELLKHPFLQH 264
S +++K L K+P+ R +++ HPF ++
Sbjct: 237 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 277
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 28/281 (9%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR--LARQTERCRRSAHQEMALIARV 62
+ ++++ IGRG++ +LV + + Y +K ++ L E ++
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
HP++V + + + V Y GGD+ M++ PEE + A++ LA++
Sbjct: 79 NHPFLVGLHSCF-QTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALN 135
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKT-LKADDLASSVVGTPNYMCPELLAD 181
YLH +++RDLK N+ L + ++L D+G+ K L+ D S GTPNY+ PE+L
Sbjct: 136 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 195
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAG------------LISKINRSSIGPLPS 229
YGF D W+LG M+EM A R FD+ G L I I +P
Sbjct: 196 EDYGFSVDWWALGVLMFEMMAGR---SPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPR 251
Query: 230 CYSPSLKTLIKGMLRKNPEHR------PSASELLKHPFLQH 264
S +++K L K+P+ R +++ HPF ++
Sbjct: 252 SMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRN 292
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 28/281 (9%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR--LARQTERCRRSAHQEMALIARV 62
+ ++++ IGRG++ +LV + + Y +K ++ L E ++
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
HP++V + + + V Y GGD+ M++ PEE + A++ LA++
Sbjct: 68 NHPFLVGLHSCF-QTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALN 124
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKT-LKADDLASSVVGTPNYMCPELLAD 181
YLH +++RDLK N+ L + ++L D+G+ K L+ D S GTPNY+ PE+L
Sbjct: 125 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 184
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAG------------LISKINRSSIGPLPS 229
YGF D W+LG M+EM A R FD+ G L I I +P
Sbjct: 185 EDYGFSVDWWALGVLMFEMMAGR---SPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPR 240
Query: 230 CYSPSLKTLIKGMLRKNPEHR------PSASELLKHPFLQH 264
S +++K L K+P+ R +++ HPF ++
Sbjct: 241 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 10/264 (3%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D Y++ E++G+GAF + ++Y K I + + R + +E + ++HP
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
IV ++ E+G + +V GG++ E + Y+ E Q+L +V+++H
Sbjct: 91 NIVRLHDSISEEGFHY-LVFDLVTGGELFEDIVARE--YYSEADASHCIHQILESVNHIH 147
Query: 126 SNYVLHRDLKCSNIFLT---KDQDVRLGDFGLAKTLKADDLAS-SVVGTPNYMCPELLAD 181
+ ++HRDLK N+ L K V+L DFGLA ++ + A GTP Y+ PE+L
Sbjct: 148 QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRK 207
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSLKTL 238
PYG DIW+ G +Y + P F D L +I + P +P K L
Sbjct: 208 DPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNL 267
Query: 239 IKGMLRKNPEHRPSASELLKHPFL 262
I ML NP R +A + LKHP++
Sbjct: 268 INQMLTINPAKRITADQALKHPWV 291
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 10/263 (3%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D Y+ + +G GAF IL + +K +K I E S E+A++ +++HP
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KEALEGKEGSMENEIAVLHKIKHP 76
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
IV + + E G ++ ++ GG++ + + + ++ E + Q+L AV YLH
Sbjct: 77 NIVALDDIY-ESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLH 133
Query: 126 SNYVLHRDLKCSNIF---LTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
++HRDLK N+ L +D + + DFGL+K + S+ GTP Y+ PE+LA
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSLKTLI 239
PY D WS+G Y + P F + A L +I ++ P S S K I
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 240 KGMLRKNPEHRPSASELLKHPFL 262
+ ++ K+PE R + + L+HP++
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 10/263 (3%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D Y+ + +G GAF IL + +K +K I E S E+A++ +++HP
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KEALEGKEGSMENEIAVLHKIKHP 76
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
IV + + E G ++ ++ GG++ + + + ++ E + Q+L AV YLH
Sbjct: 77 NIVALDDIY-ESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLH 133
Query: 126 SNYVLHRDLKCSNIF---LTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
++HRDLK N+ L +D + + DFGL+K + S+ GTP Y+ PE+LA
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSLKTLI 239
PY D WS+G Y + P F + A L +I ++ P S S K I
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 240 KGMLRKNPEHRPSASELLKHPFL 262
+ ++ K+PE R + + L+HP++
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 127/263 (48%), Gaps = 9/263 (3%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D Y++ E++G+GAF H+ ++ K I + + R + +E + ++QHP
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 64
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
IV ++ +++ + +V GG++ E + ++ E Q+L ++ Y H
Sbjct: 65 NIVRLHDS-IQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCH 121
Query: 126 SNYVLHRDLKCSNIFLT---KDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
SN ++HR+LK N+ L K V+L DFGLA + + GTP Y+ PE+L
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 181
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSLKTLI 239
PY DIW+ G +Y + P F D L ++I + P +P K+LI
Sbjct: 182 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 241
Query: 240 KGMLRKNPEHRPSASELLKHPFL 262
ML NP+ R +A + LK P++
Sbjct: 242 DSMLTVNPKKRITADQALKVPWI 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 127/263 (48%), Gaps = 9/263 (3%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D Y++ E++G+GAF H+ ++ K I + + R + +E + ++QHP
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
IV ++ +++ + +V GG++ E + ++ E Q+L ++ Y H
Sbjct: 66 NIVRLHDS-IQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCH 122
Query: 126 SNYVLHRDLKCSNIFLT---KDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
SN ++HR+LK N+ L K V+L DFGLA + + GTP Y+ PE+L
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSLKTLI 239
PY DIW+ G +Y + P F D L ++I + P +P K+LI
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242
Query: 240 KGMLRKNPEHRPSASELLKHPFL 262
ML NP+ R +A + LK P++
Sbjct: 243 DSMLTVNPKKRITADQALKVPWI 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 127/263 (48%), Gaps = 9/263 (3%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D Y++ E++G+GAF H+ ++ K I + + R + +E + ++QHP
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
IV ++ +++ + +V GG++ E + ++ E Q+L ++ Y H
Sbjct: 66 NIVRLHDS-IQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCH 122
Query: 126 SNYVLHRDLKCSNIFLT---KDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
SN ++HR+LK N+ L K V+L DFGLA + + GTP Y+ PE+L
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSLKTLI 239
PY DIW+ G +Y + P F D L ++I + P +P K+LI
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242
Query: 240 KGMLRKNPEHRPSASELLKHPFL 262
ML NP+ R +A + LK P++
Sbjct: 243 DSMLTVNPKKRITADQALKVPWI 265
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQ---EMALIARV 62
D YE+ E IG GA +K+K +K+I L E+C+ S + E+ +++
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINL----EKCQTSMDELLKEIQAMSQC 70
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMK------KSNGAYFPEEKLCKWFAQ 116
HP IV + ++V K + +V GG + +++K + E + +
Sbjct: 71 HHPNIVSYYTSFVVKD-ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA------DDLASSVVGT 170
+L ++YLH N +HRD+K NI L +D V++ DFG++ L + + + VGT
Sbjct: 130 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 171 PNYMCPELLADI-PYGFKSDIWSLGCCMYEMAAHRPAFKAF-DMAGLISKINRS----SI 224
P +M PE++ + Y FK+DIWS G E+A + + M L+ +
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249
Query: 225 G----PLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
G + Y S + +I L+K+PE RP+A+ELL+H F Q
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 139/268 (51%), Gaps = 10/268 (3%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKI--RLARQTERCRRSAHQEMALIARVQHP 65
Y I E +G G+FG L H ++K LK I +L ++++ R +E++ + ++HP
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHP 69
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
+I++ + + + +V Y G +++K E++ ++F Q++ A++Y H
Sbjct: 70 HIIKLYDV-ITTPTDIVMVIEYAGGELFDYIVEKKR---MTEDEGRRFFQQIICAIEYCH 125
Query: 126 SNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY- 184
+ ++HRDLK N+ L + +V++ DFGL+ + + + G+PNY PE++ Y
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 185 GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLR 244
G + D+WS G +Y M R F + L K+N S + +P SP ++LI+ M+
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVN-SCVYVMPDFLSPGAQSLIRRMIV 244
Query: 245 KNPEHRPSASELLKHPFLQ-HFVDQYRP 271
+P R + E+ + P+ + D RP
Sbjct: 245 ADPMQRITIQEIRRDPWFNVNLPDYLRP 272
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 136/272 (50%), Gaps = 21/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV-QH 64
D YE+ E IG G++ H+A ++ +K I ++ +R +E+ ++ R QH
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKII------DKSKRDPTEEIEILLRYGQH 75
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P I+ K+ + + G YV +VT +GG++ + + + +F E + + V+YL
Sbjct: 76 PNIITLKDVY-DDGKYVYVVTELXKGGELLDKILRQK--FFSEREASAVLFTITKTVEYL 132
Query: 125 HSNYVLHRDLKCSNIFLTKD----QDVRLGDFGLAKTLKADD-LASSVVGTPNYMCPELL 179
H+ V+HRDLK SNI + + +R+ DFG AK L+A++ L + T N++ PE+L
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVL 192
Query: 180 ADIPYGFKSDIWSLGCCMY-EMAAHRPAFKAFD-----MAGLISKINRSSIGPLPSCYSP 233
Y DIWSLG +Y + + P D + I S G + S
Sbjct: 193 ERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSD 252
Query: 234 SLKTLIKGMLRKNPEHRPSASELLKHPFLQHF 265
+ K L+ L +P R +A+ +L+HP++ H+
Sbjct: 253 TAKDLVSKXLHVDPHQRLTAALVLRHPWIVHW 284
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 131/275 (47%), Gaps = 22/275 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA------HQEMALI 59
D+Y + + +G GA G L R KK +K I + R A E+ ++
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK-WFAQLL 118
++ HP I++ K + + Y IV EGG EL K G +E CK +F Q+L
Sbjct: 69 KKLNHPCIIKIKNFFDAEDYY--IVLELMEGG---ELFDKVVGNKRLKEATCKLYFYQML 123
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQD---VRLGDFGLAKTLKADDLASSVVGTPNYMC 175
LAV YLH N ++HRDLK N+ L+ ++ +++ DFG +K L L ++ GTP Y+
Sbjct: 124 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 183
Query: 176 PELLADI---PYGFKSDIWSLGCCMYEMAAHRPAFKAF-DMAGLISKINRSSIGPLPSCY 231
PE+L + Y D WSLG ++ + P F L +I +P +
Sbjct: 184 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 243
Query: 232 ---SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S L+K +L +P+ R + E L+HP+LQ
Sbjct: 244 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 133/269 (49%), Gaps = 18/269 (6%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D + ++G GAFG LV R+ + V+K I R ++ E+ ++ + HP
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHP 80
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAE--LMKKSNGAYFPEEKLCKWFAQLLLAVDY 123
I++ E + E + IV CEGG++ E + ++ G E + + Q++ A+ Y
Sbjct: 81 NIIKIFEVF-EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 124 LHSNYVLHRDLKCSNIFLTKDQD------VRLGDFGLAKTLKADDLASSVVGTPNYMCPE 177
HS +V+H+DLK NI QD +++ DFGLA+ K+D+ +++ GT YM PE
Sbjct: 140 FHSQHVVHKDLKPENILF---QDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPE 196
Query: 178 LLA-DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSC--YSPS 234
+ D+ FK DIWS G MY + F + + K C +P
Sbjct: 197 VFKRDVT--FKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQ 254
Query: 235 LKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
L+K ML K+PE RPSA+++L H + +
Sbjct: 255 AVDLLKQMLTKDPERRPSAAQVLHHEWFK 283
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 131/275 (47%), Gaps = 22/275 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA------HQEMALI 59
D+Y + + +G GA G L R KK +K I + R A E+ ++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK-WFAQLL 118
++ HP I++ K + + Y IV EGG EL K G +E CK +F Q+L
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY--IVLELMEGG---ELFDKVVGNKRLKEATCKLYFYQML 124
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQD---VRLGDFGLAKTLKADDLASSVVGTPNYMC 175
LAV YLH N ++HRDLK N+ L+ ++ +++ DFG +K L L ++ GTP Y+
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 176 PELLADI---PYGFKSDIWSLGCCMYEMAAHRPAFKAF-DMAGLISKINRSSIGPLPSCY 231
PE+L + Y D WSLG ++ + P F L +I +P +
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 232 ---SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S L+K +L +P+ R + E L+HP+LQ
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 131/275 (47%), Gaps = 22/275 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA------HQEMALI 59
D+Y + + +G GA G L R KK +K I + R A E+ ++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK-WFAQLL 118
++ HP I++ K + + Y IV EGG EL K G +E CK +F Q+L
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY--IVLELMEGG---ELFDKVVGNKRLKEATCKLYFYQML 124
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQD---VRLGDFGLAKTLKADDLASSVVGTPNYMC 175
LAV YLH N ++HRDLK N+ L+ ++ +++ DFG +K L L ++ GTP Y+
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 176 PELLADI---PYGFKSDIWSLGCCMYEMAAHRPAFKAF-DMAGLISKINRSSIGPLPSCY 231
PE+L + Y D WSLG ++ + P F L +I +P +
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 232 ---SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S L+K +L +P+ R + E L+HP+LQ
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 30/283 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQ---EMALIARV 62
D YE+ E IG GA +K+K +K+I L E+C+ S + E+ +++
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINL----EKCQTSMDELLKEIQAMSQC 65
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMK------KSNGAYFPEEKLCKWFAQ 116
HP IV + ++V K + +V GG + +++K + E + +
Sbjct: 66 HHPNIVSYYTSFVVKD-ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA------DDLASSVVGT 170
+L ++YLH N +HRD+K NI L +D V++ DFG++ L + + + VGT
Sbjct: 125 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 171 PNYMCPELLADI-PYGFKSDIWSLGCCMYEMA-AHRPAFKAFDMAGLISKINRS----SI 224
P +M PE++ + Y FK+DIWS G E+A P K M L+ +
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 244
Query: 225 G----PLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
G + Y S + +I L+K+PE RP+A+ELL+H F Q
Sbjct: 245 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 287
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 131/275 (47%), Gaps = 22/275 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA------HQEMALI 59
D+Y + + +G GA G L R KK +K I + R A E+ ++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK-WFAQLL 118
++ HP I++ K + + Y IV EGG EL K G +E CK +F Q+L
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY--IVLELMEGG---ELFDKVVGNKRLKEATCKLYFYQML 124
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQD---VRLGDFGLAKTLKADDLASSVVGTPNYMC 175
LAV YLH N ++HRDLK N+ L+ ++ +++ DFG +K L L ++ GTP Y+
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 176 PELLADI---PYGFKSDIWSLGCCMYEMAAHRPAFKAF-DMAGLISKINRSSIGPLPSCY 231
PE+L + Y D WSLG ++ + P F L +I +P +
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 232 ---SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S L+K +L +P+ R + E L+HP+LQ
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 131/275 (47%), Gaps = 22/275 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA------HQEMALI 59
D+Y + + +G GA G L R KK +K I + R A E+ ++
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK-WFAQLL 118
++ HP I++ K + + Y IV EGG EL K G +E CK +F Q+L
Sbjct: 76 KKLNHPCIIKIKNFFDAEDYY--IVLELMEGG---ELFDKVVGNKRLKEATCKLYFYQML 130
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQD---VRLGDFGLAKTLKADDLASSVVGTPNYMC 175
LAV YLH N ++HRDLK N+ L+ ++ +++ DFG +K L L ++ GTP Y+
Sbjct: 131 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 190
Query: 176 PELLADI---PYGFKSDIWSLGCCMYEMAAHRPAFKAF-DMAGLISKINRSSIGPLPSCY 231
PE+L + Y D WSLG ++ + P F L +I +P +
Sbjct: 191 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 250
Query: 232 ---SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S L+K +L +P+ R + E L+HP+LQ
Sbjct: 251 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 130/266 (48%), Gaps = 10/266 (3%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y I+ +G+G+FG + R +++Y +K I A + + +E+ L+ ++ HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
I++ E + + + Y G E++K+ F E + Q+ + Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMH 138
Query: 126 SNYVLHRDLKCSNIFL---TKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
+ ++HRDLK NI L KD D+++ DFGL+ + + +GT Y+ PE+L
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG- 197
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIG---PLPSCYSPSLKTLI 239
Y K D+WS G +Y + + P F + ++ ++ P S K LI
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 240 KGMLRKNPEHRPSASELLKHPFLQHF 265
+ ML +P R +A++ L+HP++Q +
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQKY 283
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 134/268 (50%), Gaps = 13/268 (4%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERC--RRSAHQEMALIARVQ 63
D+Y+ +G+G+FG IL + ++ +K I RQ ++ + S +E+ L+ ++
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVIS-KRQVKQKTDKESLLREVQLLKQLD 107
Query: 64 HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDY 123
HP I++ E + +KG + + Y G E++ + F E + Q+L + Y
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITY 164
Query: 124 LHSNYVLHRDLKCSNIFL---TKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+H N ++HRDLK N+ L +KD ++R+ DFGL+ +A +GT Y+ PE+L
Sbjct: 165 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 224
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIG-PLPSC--YSPSLKT 237
Y K D+WS G +Y + + P F + ++ K+ + LP S S K
Sbjct: 225 G-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 283
Query: 238 LIKGMLRKNPEHRPSASELLKHPFLQHF 265
LI+ ML P R SA + L H ++Q +
Sbjct: 284 LIRKMLTYVPSMRISARDALDHEWIQTY 311
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 134/268 (50%), Gaps = 13/268 (4%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERC--RRSAHQEMALIARVQ 63
D+Y+ +G+G+FG IL + ++ +K I RQ ++ + S +E+ L+ ++
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVIS-KRQVKQKTDKESLLREVQLLKQLD 108
Query: 64 HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDY 123
HP I++ E + +KG + + Y G E++ + F E + Q+L + Y
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITY 165
Query: 124 LHSNYVLHRDLKCSNIFL---TKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+H N ++HRDLK N+ L +KD ++R+ DFGL+ +A +GT Y+ PE+L
Sbjct: 166 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 225
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIG-PLPSC--YSPSLKT 237
Y K D+WS G +Y + + P F + ++ K+ + LP S S K
Sbjct: 226 G-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 284
Query: 238 LIKGMLRKNPEHRPSASELLKHPFLQHF 265
LI+ ML P R SA + L H ++Q +
Sbjct: 285 LIRKMLTYVPSMRISARDALDHEWIQTY 312
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 140/271 (51%), Gaps = 16/271 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH---QEMALIARV 62
D YE+ E IG+GAF +R +++ +K + +A+ T S +E ++ +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLC-KWFAQLLLA 120
+HP+IVE E + G + +V + +G D+ E++K+++ + E + + Q+L A
Sbjct: 84 KHPHIVELLETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQD---VRLGDFGLAKTLKADDL-ASSVVGTPNYMCP 176
+ Y H N ++HRD+K N+ L ++ V+LGDFG+A L L A VGTP++M P
Sbjct: 143 LRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 177 ELLADIPYGFKSDIWSLGCCMYEMAAHRPAF---KAFDMAGLISKINRSSIGPLP-SCYS 232
E++ PYG D+W G ++ + + F K G+I + + P S S
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK--GKYKMNPRQWSHIS 260
Query: 233 PSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K L++ ML +P R + E L HP+L+
Sbjct: 261 ESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 134/268 (50%), Gaps = 13/268 (4%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERC--RRSAHQEMALIARVQ 63
D+Y+ +G+G+FG IL + ++ +K I RQ ++ + S +E+ L+ ++
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVIS-KRQVKQKTDKESLLREVQLLKQLD 84
Query: 64 HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDY 123
HP I++ E + +KG + + Y G E++ + F E + Q+L + Y
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITY 141
Query: 124 LHSNYVLHRDLKCSNIFL---TKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+H N ++HRDLK N+ L +KD ++R+ DFGL+ +A +GT Y+ PE+L
Sbjct: 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 201
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIG-PLPSC--YSPSLKT 237
Y K D+WS G +Y + + P F + ++ K+ + LP S S K
Sbjct: 202 G-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 260
Query: 238 LIKGMLRKNPEHRPSASELLKHPFLQHF 265
LI+ ML P R SA + L H ++Q +
Sbjct: 261 LIRKMLTYVPSMRISARDALDHEWIQTY 288
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 114 bits (285), Expect = 3e-25, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 138/269 (51%), Gaps = 14/269 (5%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARV 62
+ ++I+ +G G+FG L+ R + Y +K ++ R ++ H E +++ V
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK-KEIVVRLKQVEHTNDERLMLSIV 63
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
HP+I+ + + + ++ Y EGG++ L++KS FP + A++ LA++
Sbjct: 64 THPFIIRMWGTF-QDAQQIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALE 120
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
YLHS +++RDLK NI L K+ +++ DFG AK + D+ + GTP+Y+ PE+++
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP--DVTYXLCGTPDYIAPEVVSTK 178
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGM 242
PY D WS G +YEM A F + KI + + P ++ +K L+ +
Sbjct: 179 PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL-RFPPFFNEDVKDLLSRL 237
Query: 243 LRKNPEHR----PSASELLK-HPFLQHFV 266
+ ++ R + +E +K HP+ + V
Sbjct: 238 ITRDLSQRLGNLQNGTEDVKNHPWFKEVV 266
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 129/255 (50%), Gaps = 11/255 (4%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
+IG G+ G + + K+ +KK+ L +Q R E+ ++ H +V+
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR--ELLFNEVVIMRDYHHDNVVDMYS 109
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
+++ G + +V + EGG + +++ + EE++ +L A+ YLH+ V+HR
Sbjct: 110 SYL-VGDELWVVMEFLEGGALTDIVTHTR---MNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 133 DLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIW 191
D+K +I LT D ++L DFG A+ K +VGTP +M PE+++ +PYG + DIW
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIW 225
Query: 192 SLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPS---CYSPSLKTLIKGMLRKNPE 248
SLG + EM P + + +I R S+ P S L+ + ML + P
Sbjct: 226 SLGIMVIEMIDGEPPYFNEPPLQAMRRI-RDSLPPRVKDLHKVSSVLRGFLDLMLVREPS 284
Query: 249 HRPSASELLKHPFLQ 263
R +A ELL HPFL+
Sbjct: 285 QRATAQELLGHPFLK 299
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 113 bits (283), Expect = 5e-25, Method: Composition-based stats.
Identities = 73/250 (29%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ IG G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GGDM +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYMPGGDMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 113 bits (283), Expect = 5e-25, Method: Composition-based stats.
Identities = 73/250 (29%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ IG G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GGDM +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYMPGGDMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 131/275 (47%), Gaps = 22/275 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA------HQEMALI 59
D+Y + + +G GA G L R KK ++ I + R A E+ ++
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK-WFAQLL 118
++ HP I++ K + + Y IV EGG EL K G +E CK +F Q+L
Sbjct: 195 KKLNHPCIIKIKNFFDAEDYY--IVLELMEGG---ELFDKVVGNKRLKEATCKLYFYQML 249
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQD---VRLGDFGLAKTLKADDLASSVVGTPNYMC 175
LAV YLH N ++HRDLK N+ L+ ++ +++ DFG +K L L ++ GTP Y+
Sbjct: 250 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 309
Query: 176 PELLADI---PYGFKSDIWSLGCCMYEMAAHRPAFKAF-DMAGLISKINRSSIGPLPSCY 231
PE+L + Y D WSLG ++ + P F L +I +P +
Sbjct: 310 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 369
Query: 232 ---SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S L+K +L +P+ R + E L+HP+LQ
Sbjct: 370 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 124/264 (46%), Gaps = 10/264 (3%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
Y++ E++G+GAF ++Y K I + + R + +E + ++HP I
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSN 127
V ++ E+G + I GG++ E + Y+ E Q+L AV + H
Sbjct: 84 VRLHDSISEEGHHYLIFD-LVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQM 140
Query: 128 YVLHRDLKCSNIFLT---KDQDVRLGDFGLAKTLKADDLAS-SVVGTPNYMCPELLADIP 183
V+HRDLK N+ L K V+L DFGLA ++ + A GTP Y+ PE+L P
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 184 YGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSLKTLIK 240
YG D+W+ G +Y + P F D L +I + P +P K LI
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 260
Query: 241 GMLRKNPEHRPSASELLKHPFLQH 264
ML NP R +A+E LKHP++ H
Sbjct: 261 KMLTINPSKRITAAEALKHPWISH 284
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 141/285 (49%), Gaps = 14/285 (4%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQ-EMALIARVQHPY 66
+ ME +G GAF LV R K + LK I+ ++ R S+ + E+A++ +++H
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIK---KSPAFRDSSLENEIAVLKKIKHEN 67
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
IV ++ + E + +V GG++ + + + G Y E+ Q+L AV YLH
Sbjct: 68 IVTLEDIY-ESTTHYYLVMQLVSGGELFDRILE-RGVY-TEKDASLVIQQVLSAVKYLHE 124
Query: 127 NYVLHRDLKCSNI-FLTKDQD--VRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIP 183
N ++HRDLK N+ +LT +++ + + DFGL+K ++ + + S+ GTP Y+ PE+LA P
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 184 YGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSLKTLIK 240
Y D WS+G Y + P F + L KI P S S K I
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFIC 243
Query: 241 GMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPAACSPEKPIS 285
+L K+P R + + L HP++ +R +P + +K +
Sbjct: 244 HLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVSLQIQKNFA 288
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 130/253 (51%), Gaps = 9/253 (3%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
+IG G+ G L + ++ +K + L +Q R E+ ++ QH +VE +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR--ELLFNEVVIMRDYQHFNVVEMYK 109
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
+++ G + ++ + +GG + +++ + EE++ +L A+ YLH+ V+HR
Sbjct: 110 SYL-VGEELWVLMEFLQGGALTDIVSQVR---LNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 133 DLKCSNIFLTKDQDVRLGDFGLAKTLKADD-LASSVVGTPNYMCPELLADIPYGFKSDIW 191
D+K +I LT D V+L DFG + D +VGTP +M PE+++ Y + DIW
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIW 225
Query: 192 SLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY--SPSLKTLIKGMLRKNPEH 249
SLG + EM P + + + ++ S L + + SP L+ ++ ML ++P+
Sbjct: 226 SLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQE 285
Query: 250 RPSASELLKHPFL 262
R +A ELL HPFL
Sbjct: 286 RATAQELLDHPFL 298
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 131/275 (47%), Gaps = 22/275 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA------HQEMALI 59
D+Y + + +G GA G L R KK ++ I + R A E+ ++
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK-WFAQLL 118
++ HP I++ K + + Y IV EGG EL K G +E CK +F Q+L
Sbjct: 209 KKLNHPCIIKIKNFFDAEDYY--IVLELMEGG---ELFDKVVGNKRLKEATCKLYFYQML 263
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQD---VRLGDFGLAKTLKADDLASSVVGTPNYMC 175
LAV YLH N ++HRDLK N+ L+ ++ +++ DFG +K L L ++ GTP Y+
Sbjct: 264 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 323
Query: 176 PELLADI---PYGFKSDIWSLGCCMYEMAAHRPAFKAF-DMAGLISKINRSSIGPLPSCY 231
PE+L + Y D WSLG ++ + P F L +I +P +
Sbjct: 324 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 383
Query: 232 ---SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S L+K +L +P+ R + E L+HP+LQ
Sbjct: 384 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 141/277 (50%), Gaps = 13/277 (4%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR---LARQTERCRRSAHQEMALI 59
+ + Y+I++ +G G+FG L H +K LK I LA+ + R +E++ +
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYL 58
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
++HP+I++ + K + ++ G ++ + + + + E++ ++F Q++
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIE--YAGNELFDYIVQRDK--MSEQEARRFFQQIIS 114
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
AV+Y H + ++HRDLK N+ L + +V++ DFGL+ + + + G+PNY PE++
Sbjct: 115 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 174
Query: 180 ADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTL 238
+ Y G + D+WS G +Y M R F + L I+ + + LP SP L
Sbjct: 175 SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS-NGVYTLPKFLSPGAAGL 233
Query: 239 IKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPP 275
IK ML NP +R S E+++ + + VD PP
Sbjct: 234 IKRMLIVNPLNRISIHEIMQDDWFK--VDLPEYLLPP 268
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 129/244 (52%), Gaps = 9/244 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 59 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 117
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + AQ++L
Sbjct: 118 AVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA--AQIVLT 174
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K ++ GTP Y+ PE++
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA--TWTLCGTPEYLAPEIIL 232
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 291
Query: 241 GMLR 244
+L+
Sbjct: 292 NLLQ 295
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 112 bits (279), Expect = 1e-24, Method: Composition-based stats.
Identities = 72/250 (28%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ IG G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 141/277 (50%), Gaps = 13/277 (4%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR---LARQTERCRRSAHQEMALI 59
+ + Y+I++ +G G+FG L H +K LK I LA+ + R +E++ +
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYL 62
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
++HP+I++ + K + ++ G ++ + + + + E++ ++F Q++
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIE--YAGNELFDYIVQRDK--MSEQEARRFFQQIIS 118
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
AV+Y H + ++HRDLK N+ L + +V++ DFGL+ + + + G+PNY PE++
Sbjct: 119 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 178
Query: 180 ADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTL 238
+ Y G + D+WS G +Y M R F + L I+ + + LP SP L
Sbjct: 179 SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS-NGVYTLPKFLSPGAAGL 237
Query: 239 IKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPP 275
IK ML NP +R S E+++ + + VD PP
Sbjct: 238 IKRMLIVNPLNRISIHEIMQDDWFK--VDLPEYLLPP 272
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 137/265 (51%), Gaps = 11/265 (4%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR---LARQTERCRRSAHQEMALI 59
+ + Y+I++ +G G+FG L H +K LK I LA+ + R +E++ +
Sbjct: 11 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYL 68
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
++HP+I++ + K + ++ G ++ + + + + E++ ++F Q++
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIE--YAGNELFDYIVQRDK--MSEQEARRFFQQIIS 124
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
AV+Y H + ++HRDLK N+ L + +V++ DFGL+ + + + G+PNY PE++
Sbjct: 125 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 184
Query: 180 ADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTL 238
+ Y G + D+WS G +Y M R F + L I+ + + LP SP L
Sbjct: 185 SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS-NGVYTLPKFLSPGAAGL 243
Query: 239 IKGMLRKNPEHRPSASELLKHPFLQ 263
IK ML NP +R S E+++ + +
Sbjct: 244 IKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 137/265 (51%), Gaps = 11/265 (4%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR---LARQTERCRRSAHQEMALI 59
+ + Y+I++ +G G+FG L H +K LK I LA+ + R +E++ +
Sbjct: 10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYL 67
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
++HP+I++ + K + ++ G ++ + + + + E++ ++F Q++
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIE--YAGNELFDYIVQRDK--MSEQEARRFFQQIIS 123
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
AV+Y H + ++HRDLK N+ L + +V++ DFGL+ + + + G+PNY PE++
Sbjct: 124 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 183
Query: 180 ADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTL 238
+ Y G + D+WS G +Y M R F + L I+ + + LP SP L
Sbjct: 184 SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNIS-NGVYTLPKFLSPGAAGL 242
Query: 239 IKGMLRKNPEHRPSASELLKHPFLQ 263
IK ML NP +R S E+++ + +
Sbjct: 243 IKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 128/244 (52%), Gaps = 9/244 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 59 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 117
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + AQ++L
Sbjct: 118 AVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFXEPHARFYA--AQIVLT 174
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIIL 232
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 291
Query: 241 GMLR 244
+L+
Sbjct: 292 NLLQ 295
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 129/252 (51%), Gaps = 9/252 (3%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ ++ IG+G+FG +L H+AE+ Y VL+K + ++ E + + L+ V+H
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEE-KHIMSERNVLLKNVKH 98
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P++V ++ + + V Y GG++ +++ F E + + A++ A+ YL
Sbjct: 99 PFLVGLHFSF-QTADKLYFVLDYINGGELFYHLQRERC--FLEPRARFYAAEIASALGYL 155
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAK-TLKADDLASSVVGTPNYMCPELLADIP 183
HS +++RDLK NI L + L DFGL K ++ + S+ GTP Y+ PE+L P
Sbjct: 156 HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 184 YGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGML 243
Y D W LG +YEM P F + + A + I + P+ + S + L++G+L
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNI-TNSARHLLEGLL 274
Query: 244 RKNPEHRPSASE 255
+K+ R A +
Sbjct: 275 QKDRTKRLGAKD 286
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 111 bits (278), Expect = 2e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 130/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 31 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 89
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 90 AVNFPFLVKLEFSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFXEPHARF--YAAQIVLT 146
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 147 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 204
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 263
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 264 NLLQVDLTKR 273
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 111 bits (278), Expect = 2e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 132/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 127/244 (52%), Gaps = 9/244 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 59 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 117
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + AQ++L
Sbjct: 118 AVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARFYA--AQIVLT 174
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIIL 232
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 291
Query: 241 GMLR 244
+L+
Sbjct: 292 NLLQ 295
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 130/266 (48%), Gaps = 10/266 (3%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y I+ +G+G+FG + R +++Y +K I A + + +E+ L+ ++ HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
I++ E + + + Y G E++K+ F E + Q+ + Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMH 138
Query: 126 SNYVLHRDLKCSNIFL---TKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
+ ++HRDLK NI L KD D+++ DFGL+ + + +GT Y+ PE+L
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG- 197
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIG---PLPSCYSPSLKTLI 239
Y K D+WS G +Y + + P F + ++ ++ P S K LI
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 240 KGMLRKNPEHRPSASELLKHPFLQHF 265
+ ML +P R +A++ L+HP++Q +
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQKY 283
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 111 bits (278), Expect = 2e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 130/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 98 AVNFPFLVKLEFSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 154
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 212
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 271
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 272 NLLQVDLTKR 281
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 111 bits (277), Expect = 2e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 130/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 98 AVNFPFLVKLEFSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 154
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 212
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 271
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 272 NLLQVDLTKR 281
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 111 bits (277), Expect = 2e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 130/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 98 AVNFPFLVKLEFSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 154
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 212
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 271
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 272 NLLQVDLTKR 281
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 134/268 (50%), Gaps = 13/268 (4%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERC--RRSAHQEMALIARVQ 63
D+Y+ +G+G+FG IL + ++ +K I RQ ++ + S +E+ L+ ++
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVIS-KRQVKQKTDKESLLREVQLLKQLD 90
Query: 64 HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDY 123
HP I++ E + +KG + + Y G E++ + F E + Q+L + Y
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITY 147
Query: 124 LHSNYVLHRDLKCSNIFL---TKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+H N ++HRDLK N+ L +KD ++R+ DFGL+ +A +GT Y+ PE+L
Sbjct: 148 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 207
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIG-PLPSC--YSPSLKT 237
Y K D+WS G +Y + + P F + ++ K+ + LP S S K
Sbjct: 208 G-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 266
Query: 238 LIKGMLRKNPEHRPSASELLKHPFLQHF 265
LI+ ML P R SA + L H ++Q +
Sbjct: 267 LIRKMLTYVPSMRISARDALDHEWIQTY 294
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 130/266 (48%), Gaps = 10/266 (3%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y I+ +G+G+FG + R +++Y +K I A + + +E+ L+ ++ HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
I++ E + + + Y G E++K+ F E + Q+ + Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMH 138
Query: 126 SNYVLHRDLKCSNIFL---TKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
+ ++HRDLK NI L KD D+++ DFGL+ + + +GT Y+ PE+L
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG- 197
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIG---PLPSCYSPSLKTLI 239
Y K D+WS G +Y + + P F + ++ ++ P S K LI
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 240 KGMLRKNPEHRPSASELLKHPFLQHF 265
+ ML +P R +A++ L+HP++Q +
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQKY 283
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 132/278 (47%), Gaps = 23/278 (8%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
ME + D +E + ++G G G V+H+ K I L + R +E+ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA-IRNQIIRELQVLH 59
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
PYIV F A+ G + I + +GG + +++KK+ PE+ L K ++
Sbjct: 60 ECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKG 116
Query: 121 VDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ YL + ++HRD+K SNI + +++L DFG++ L D +A+S VGT +YM PE L
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERL 175
Query: 180 ADIPYGFKSDIWSLGCCMYEMAA-------------HRPAFKAFDMAGLISKINRSSIGP 226
Y +SDIWS+G + EMA RP F+ L+ I
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFE---LLDYIVNEPPPK 232
Query: 227 LPS-CYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
LPS +S + + L KNP R +L+ H F++
Sbjct: 233 LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 270
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 111 bits (277), Expect = 3e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFXEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 111 bits (277), Expect = 3e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFXEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 111 bits (277), Expect = 3e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFXEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 111 bits (277), Expect = 3e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 33 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 91
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 92 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFXEPHARF--YAAQIVLT 148
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 149 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 206
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 265
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 266 NLLQVDLTKR 275
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 111 bits (277), Expect = 3e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLAGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 111 bits (277), Expect = 3e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 130/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 98 AVNFPFLVKLEFSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 154
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 212
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 271
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 272 NLLQVDLTKR 281
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 111 bits (277), Expect = 3e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 130/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 31 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 89
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 90 AVNFPFLVKLEFSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 146
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 147 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 204
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 263
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 264 NLLQVDLTKR 273
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 125/266 (46%), Gaps = 10/266 (3%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y++ E++G+GAF ++Y I + + R + +E + ++HP
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
IV ++ E+G + I GG++ E + Y+ E Q+L AV + H
Sbjct: 71 NIVRLHDSISEEGHHYLIFD-LVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCH 127
Query: 126 SNYVLHRDLKCSNIFLT---KDQDVRLGDFGLAKTLKADDLAS-SVVGTPNYMCPELLAD 181
V+HR+LK N+ L K V+L DFGLA ++ + A GTP Y+ PE+L
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK 187
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSLKTL 238
PYG D+W+ G +Y + P F D L +I + P +P K L
Sbjct: 188 DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 247
Query: 239 IKGMLRKNPEHRPSASELLKHPFLQH 264
I ML NP R +A+E LKHP++ H
Sbjct: 248 INKMLTINPSKRITAAEALKHPWISH 273
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 110 bits (276), Expect = 3e-24, Method: Composition-based stats.
Identities = 72/250 (28%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + + H E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFGLAK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 110 bits (276), Expect = 3e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 39 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 98 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 154
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 212
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 271
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 272 NLLQVDLTKR 281
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 110 bits (276), Expect = 3e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 110 bits (276), Expect = 3e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 110 bits (276), Expect = 3e-24, Method: Composition-based stats.
Identities = 69/244 (28%), Positives = 129/244 (52%), Gaps = 9/244 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLR 244
+L+
Sbjct: 271 NLLQ 274
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 110 bits (276), Expect = 3e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFAEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 110 bits (276), Expect = 3e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLXGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 110 bits (276), Expect = 4e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 130/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 24 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 82
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 83 AVNFPFLVKLEFSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 139
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K ++ GTP Y+ PE++
Sbjct: 140 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--TLCGTPEYLAPEIIL 197
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 256
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 257 NLLQVDLTKR 266
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 110 bits (276), Expect = 4e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFXEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 110 bits (276), Expect = 4e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIII 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 131/268 (48%), Gaps = 13/268 (4%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERC--RRSAHQEMALIARVQ 63
D+Y+ +G+G+FG IL + ++ +K I RQ ++ + S +E+ L+ ++
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVIS-KRQVKQKTDKESLLREVQLLKQLD 84
Query: 64 HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDY 123
HP I + E + +KG + + Y G E++ + F E + Q+L + Y
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITY 141
Query: 124 LHSNYVLHRDLKCSNIFL---TKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
H N ++HRDLK N+ L +KD ++R+ DFGL+ +A +GT Y+ PE+L
Sbjct: 142 XHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLH 201
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIG-PLPSC--YSPSLKT 237
Y K D+WS G +Y + + P F + ++ K+ + LP S S K
Sbjct: 202 G-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 260
Query: 238 LIKGMLRKNPEHRPSASELLKHPFLQHF 265
LI+ L P R SA + L H ++Q +
Sbjct: 261 LIRKXLTYVPSXRISARDALDHEWIQTY 288
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 110 bits (276), Expect = 4e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 25 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 83
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 84 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 140
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 141 FEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 198
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 257
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 258 NLLQVDLTKR 267
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 110 bits (275), Expect = 4e-24, Method: Composition-based stats.
Identities = 72/250 (28%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + + H E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFGLAK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 110 bits (275), Expect = 4e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 130/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 98 AVNFPFLVKLEFSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 154
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K ++ GTP Y+ PE++
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--TLCGTPEYLAPEIIL 212
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 271
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 272 NLLQVDLTKR 281
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 133/278 (47%), Gaps = 20/278 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRL-------ARQTERCRRSAHQEMAL 58
+ YE E +GRG H+ K+Y +K I + A + + R + +E+ +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 59 IARVQ-HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
+ +V HP I++ K+ + E + +V + G++ + + + E++ K L
Sbjct: 77 LRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRAL 133
Query: 118 LLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPE 177
L + LH ++HRDLK NI L D +++L DFG + L + SV GTP+Y+ PE
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPE 193
Query: 178 LLA-----DIP-YGFKSDIWSLGCCMYEMAAHRPAF---KAFDMAGLISKINRSSIGPLP 228
++ + P YG + D+WS G MY + A P F K M +I N P
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEW 253
Query: 229 SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
YS ++K L+ L P+ R +A E L HPF Q +V
Sbjct: 254 DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 110 bits (275), Expect = 5e-24, Method: Composition-based stats.
Identities = 72/253 (28%), Positives = 126/253 (49%), Gaps = 15/253 (5%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-----KIRLARQTERCRRSAHQEMA 57
+ +DQ+E + +G G+FG +LV H+ Y +K K+ +Q E + A
Sbjct: 39 AHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 58 LIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ+
Sbjct: 99 ----VNFPFLVKLEFSFKDNS-NLYMVLEYAPGGEMFSHLRRIGRFSEPHARF--YAAQI 151
Query: 118 LLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPE 177
+L +YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTW--XLCGTPEYLAPE 209
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
++ Y D W+LG +YEMAA P F A + KI + PS +S LK
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKD 268
Query: 238 LIKGMLRKNPEHR 250
L++ +L+ + R
Sbjct: 269 LLRNLLQVDLTKR 281
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 110 bits (274), Expect = 5e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 110 bits (274), Expect = 5e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFXEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 110 bits (274), Expect = 5e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFXEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 110 bits (274), Expect = 5e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 98 AVNFPFLVKLEFSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFXEPHARF--YAAQIVLT 154
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 212
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 271
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 272 NLLQVDLTKR 281
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 110 bits (274), Expect = 5e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 110 bits (274), Expect = 6e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 130/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H+ + +K I ++ + ++ H E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEYSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 110 bits (274), Expect = 6e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 130/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H+ + +K I ++ + ++ H E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEYSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 110 bits (274), Expect = 6e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 131/267 (49%), Gaps = 13/267 (4%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR 61
E + D +E + ++G G G V+H+ K I L + R +E+ ++
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA-IRNQIIRELQVLHE 63
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
PYIV F A+ G + I + +GG + +++KK+ PE+ L K ++ +
Sbjct: 64 CNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 120
Query: 122 DYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
YL + ++HRD+K SNI + +++L DFG++ L D++A+ VGT +YM PE L
Sbjct: 121 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDEMANEFVGTRSYMSPERLQ 179
Query: 181 DIPYGFKSDIWSLGCCMYEMAAH---RPAFKAFDMAGLISKINRSSIGPLPS-CYSPSLK 236
Y +SDIWS+G + EMA RP F+ L+ I LPS +S +
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFE---LLDYIVNEPPPKLPSAVFSLEFQ 236
Query: 237 TLIKGMLRKNPEHRPSASELLKHPFLQ 263
+ L KNP R +L+ H F++
Sbjct: 237 DFVNKCLIKNPAERADLKQLMVHAFIK 263
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 110 bits (274), Expect = 6e-24, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 130/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H+ + +K I ++ + ++ H E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEYSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 110 bits (274), Expect = 6e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 110 bits (274), Expect = 6e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 110 bits (274), Expect = 6e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 98 AVNFPFLVKLEFSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 154
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 212
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 271
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 272 NLLQVDLTKR 281
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 110 bits (274), Expect = 6e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 109 bits (273), Expect = 7e-24, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 129/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 122/267 (45%), Gaps = 10/267 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV 62
S D+Y++ E IG+GAF +Y K I + + R + +E + +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
+H IV ++ E+G + +V GG++ E + Y+ E Q+L AV
Sbjct: 61 KHSNIVRLHDSISEEGFHY-LVFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVL 117
Query: 123 YLHSNYVLHRDLKCSNIFLT---KDQDVRLGDFGLAKTLKADDLAS-SVVGTPNYMCPEL 178
+ H V+HRDLK N+ L K V+L DFGLA ++ D A GTP Y+ PE+
Sbjct: 118 HCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 179 LADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSL 235
L YG DIW+ G +Y + P F D L +I + P +P
Sbjct: 178 LRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 236 KTLIKGMLRKNPEHRPSASELLKHPFL 262
K LI ML NP R +A E LKHP++
Sbjct: 238 KNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 109 bits (273), Expect = 8e-24, Method: Composition-based stats.
Identities = 69/250 (27%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +Y+MAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 10/275 (3%)
Query: 12 EQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH-PYIVEF 70
+++GRG F ++ ++Y K ++ R+ + CR E+A++ + P ++
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94
Query: 71 KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVL 130
E + E + ++ Y GG++ L E + + Q+L V YLH N ++
Sbjct: 95 HEVY-ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153
Query: 131 HRDLKCSNIFLTKDQ---DVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFK 187
H DLK NI L+ D+++ DFG+++ + ++GTP Y+ PE+L P
Sbjct: 154 HLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTA 213
Query: 188 SDIWSLGCCMYEMAAHRPAFKAFDMAGL---ISKINRSSIGPLPSCYSPSLKTLIKGMLR 244
+D+W++G Y + H F D IS++N S S I+ +L
Sbjct: 214 TDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLV 273
Query: 245 KNPEHRPSASELLKHPFLQHFVDQYRPTFPPAACS 279
KNPE RP+A L H +LQ + + F P S
Sbjct: 274 KNPEKRPTAEICLSHSWLQQW--DFENLFHPEETS 306
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 18/265 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 90
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 91 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 146
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGL---AKTLKADDLASSVVGTPNYMCPE 177
+ Y HS V+HRD+K N+ L ++++ DFG A + + DDL GT +Y+ PE
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPE 202
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
++ + K D+WSLG YE +P F+A +I+R P + +
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARD 261
Query: 238 LIKGMLRKNPEHRPSASELLKHPFL 262
LI +L+ NP RP E+L+HP++
Sbjct: 262 LISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 128/264 (48%), Gaps = 25/264 (9%)
Query: 11 MEQIGRGAFGAAILVNHRAEKKKYVLKKIRLA-RQTERCRRSAHQEMALIARVQHPYIVE 69
+ +IG G+FGA + +KK+ + +Q+ + +E+ + +++HP ++
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118
Query: 70 FKEAWVEKGCYV-----CIVTGYCEGG--DMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
++ GCY+ +V YC G D+ E+ KK E ++ L +
Sbjct: 119 YR------GCYLREHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAAVTHGALQGLA 168
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
YLHS+ ++HRD+K NI L++ V+LGDFG A + A+ VGTP +M PE++ +
Sbjct: 169 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---ANXFVGTPYWMAPEVILAM 225
Query: 183 ---PYGFKSDIWSLGCCMYEMAAHR-PAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTL 238
Y K D+WSLG E+A + P F M+ L S +S +
Sbjct: 226 DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF 285
Query: 239 IKGMLRKNPEHRPSASELLKHPFL 262
+ L+K P+ RP++ LLKH F+
Sbjct: 286 VDSCLQKIPQDRPTSEVLLKHRFV 309
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 108 bits (271), Expect = 1e-23, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 128/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++ + + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 98 AVNFPFLTKLEFSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFXEPHARF--YAAQIVLT 154
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 212
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 271
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 272 NLLQVDLTKR 281
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
+E E +G GAF +L +A K + +K I + + S E+A++ +++H I
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIP-KKALKGKESSIENEIAVLRKIKHENI 82
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSN 127
V ++ + E ++ +V GG++ + + + ++ E+ Q+L AV YLH
Sbjct: 83 VALEDIY-ESPNHLYLVMQLVSGGELFDRIVEK--GFYTEKDASTLIRQVLDAVYYLHRM 139
Query: 128 YVLHRDLKCSNI-FLTKDQD--VRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY 184
++HRDLK N+ + ++D++ + + DFGL+K D+ S+ GTP Y+ PE+LA PY
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPY 199
Query: 185 GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSLKTLIKG 241
D WS+G Y + P F + + L +I ++ P S S K I+
Sbjct: 200 SKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRN 259
Query: 242 MLRKNPEHRPSASELLKHPFL 262
++ K+P R + + +HP++
Sbjct: 260 LMEKDPNKRYTCEQAARHPWI 280
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 132/278 (47%), Gaps = 20/278 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRL-------ARQTERCRRSAHQEMAL 58
+ YE E +GRG H+ K+Y +K I + A + + R + +E+ +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 59 IARVQ-HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
+ +V HP I++ K+ + E + +V + G++ + + + E++ K L
Sbjct: 77 LRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRAL 133
Query: 118 LLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPE 177
L + LH ++HRDLK NI L D +++L DFG + L + V GTP+Y+ PE
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 193
Query: 178 LLA-----DIP-YGFKSDIWSLGCCMYEMAAHRPAF---KAFDMAGLISKINRSSIGPLP 228
++ + P YG + D+WS G MY + A P F K M +I N P
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEW 253
Query: 229 SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
YS ++K L+ L P+ R +A E L HPF Q +V
Sbjct: 254 DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 134/269 (49%), Gaps = 21/269 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV-QH 64
D Y + E IG G++ H+A +Y +K I ++ +R +E+ ++ R QH
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI------DKSKRDPSEEIEILLRYGQH 80
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P I+ K+ + + G +V +VT GG++ + + + +F E + + V+YL
Sbjct: 81 PNIITLKDVY-DDGKHVYLVTELMRGGELLDKILRQK--FFSEREASFVLHTIGKTVEYL 137
Query: 125 HSNYVLHRDLKCSNIFLTKDQD----VRLGDFGLAKTLKADD-LASSVVGTPNYMCPELL 179
HS V+HRDLK SNI + +R+ DFG AK L+A++ L + T N++ PE+L
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFK---AFDMAGLISKINRSSI---GPLPSCYSP 233
Y DIWSLG +Y M A F + ++++I G + S
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE 257
Query: 234 SLKTLIKGMLRKNPEHRPSASELLKHPFL 262
+ K L+ ML +P R +A ++L+HP++
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 108 bits (270), Expect = 2e-23, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 128/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++ + + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 98 AVNFPFLTKLEFSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 154
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 212
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 271
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 272 NLLQVDLTKR 281
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 128/264 (48%), Gaps = 25/264 (9%)
Query: 11 MEQIGRGAFGAAILVNHRAEKKKYVLKKIRLA-RQTERCRRSAHQEMALIARVQHPYIVE 69
+ +IG G+FGA + +KK+ + +Q+ + +E+ + +++HP ++
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79
Query: 70 FKEAWVEKGCYV-----CIVTGYCEGG--DMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
++ GCY+ +V YC G D+ E+ KK E ++ L +
Sbjct: 80 YR------GCYLREHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAAVTHGALQGLA 129
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
YLHS+ ++HRD+K NI L++ V+LGDFG A + A+ VGTP +M PE++ +
Sbjct: 130 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---ANXFVGTPYWMAPEVILAM 186
Query: 183 ---PYGFKSDIWSLGCCMYEMAAHR-PAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTL 238
Y K D+WSLG E+A + P F M+ L S +S +
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF 246
Query: 239 IKGMLRKNPEHRPSASELLKHPFL 262
+ L+K P+ RP++ LLKH F+
Sbjct: 247 VDSCLQKIPQDRPTSEVLLKHRFV 270
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 128/283 (45%), Gaps = 30/283 (10%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
M + +EI++ IGRGAFG +V + K + +K + +R + +E
Sbjct: 69 MRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFRE----- 123
Query: 61 RVQHPYIVEFKEAWVEKGCY-------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
+ +V W+ Y + +V Y GGD+ L+ K PEE +
Sbjct: 124 --ERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFY 180
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASS--VVGTP 171
A++++A+D +H + +HRD+K NI + + +RL DFG L D S VGTP
Sbjct: 181 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTP 240
Query: 172 NYMCPELLADIP-----YGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI-NRSSIG 225
+Y+ PE+L + YG + D WSLG CMYEM F A + KI N
Sbjct: 241 DYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF 300
Query: 226 PLPSC---YSPSLKTLIKGMLRKNPEHRPSAS---ELLKHPFL 262
P+ S + K LI+ ++ EHR + + KHPF
Sbjct: 301 QFPTQVTDVSENAKDLIRRLICSR-EHRLGQNGIEDFKKHPFF 342
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 108 bits (270), Expect = 2e-23, Method: Composition-based stats.
Identities = 69/250 (27%), Positives = 130/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ P ++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPAIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 108 bits (270), Expect = 2e-23, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 128/250 (51%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+ +DQ+E ++ +G G+FG +LV H Y +K I ++ + ++ H E ++
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++ + + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 98 AVNFPFLTKLEFSFKDNS-NLYMVMEYAPGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 154
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP Y+ PE++
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIL 212
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 271
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 272 NLLQVDLTKR 281
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 134/269 (49%), Gaps = 21/269 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV-QH 64
D Y + E IG G++ H+A +Y +K I ++ +R +E+ ++ R QH
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI------DKSKRDPSEEIEILLRYGQH 80
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P I+ K+ + + G +V +VT GG++ + + + +F E + + V+YL
Sbjct: 81 PNIITLKDVY-DDGKHVYLVTELMRGGELLDKILRQK--FFSEREASFVLHTIGKTVEYL 137
Query: 125 HSNYVLHRDLKCSNIFLTKDQD----VRLGDFGLAKTLKADD-LASSVVGTPNYMCPELL 179
HS V+HRDLK SNI + +R+ DFG AK L+A++ L + T N++ PE+L
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFK---AFDMAGLISKINRSSI---GPLPSCYSP 233
Y DIWSLG +Y M A F + ++++I G + S
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE 257
Query: 234 SLKTLIKGMLRKNPEHRPSASELLKHPFL 262
+ K L+ ML +P R +A ++L+HP++
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 127/290 (43%), Gaps = 34/290 (11%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 69 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPE-LLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ + V T Y PE LL
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 183 PYGFKSDIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCYS 232
Y DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YK 245
Query: 233 PSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 34/290 (11%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 66 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIP 183
HS+ VLHRDLK N+ + + ++L DFGLA+ + V T Y PE+L
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 183
Query: 184 YGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCYS 232
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YK 242
Query: 233 PSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 34/290 (11%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 62 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIP 183
HS+ VLHRDLK N+ + + ++L DFGLA+ + V T Y PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 184 YGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCYS 232
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YK 238
Query: 233 PSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 127/290 (43%), Gaps = 34/290 (11%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 62 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPE-LLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ + V T Y PE LL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 183 PYGFKSDIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCYS 232
Y DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YK 238
Query: 233 PSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 7/274 (2%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ Y +++ IG+G F L H K+ +K I + + +E+ ++ + H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ E +E + +V Y GG++ + + ++G +E K F Q++ AV Y
Sbjct: 73 PNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAK-FRQIVSAVQYC 129
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY 184
H +++HRDLK N+ L D ++++ DFG + + + G+P Y PEL Y
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 185 -GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGML 243
G + D+WSLG +Y + + F ++ L ++ R +P S + L+K L
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKKFL 248
Query: 244 RKNPEHRPSASELLKHPFLQ--HFVDQYRPTFPP 275
NP R + +++K ++ H D+ +P P
Sbjct: 249 ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVAP 282
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 34/290 (11%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 69 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIP 183
HS+ VLHRDLK N+ + + ++L DFGLA+ + V T Y PE+L
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 186
Query: 184 YGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCYS 232
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YK 245
Query: 233 PSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 7/274 (2%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ Y +++ IG+G F L H K+ +K I + + +E+ ++ + H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ E +E + +V Y GG++ + + ++G +E K F Q++ AV Y
Sbjct: 73 PNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAK-FRQIVSAVQYC 129
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY 184
H +++HRDLK N+ L D ++++ DFG + + + G+P Y PEL Y
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 185 -GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGML 243
G + D+WSLG +Y + + F ++ L ++ R +P S + L+K L
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKKFL 248
Query: 244 RKNPEHRPSASELLKHPFLQ--HFVDQYRPTFPP 275
NP R + +++K ++ H D+ +P P
Sbjct: 249 ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEP 282
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 90
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 91 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 146
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ DFG + +++ GT +Y+ PE++
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIE 205
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLIS 264
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 265 RLLKHNPSQRPMLREVLEHPWI 286
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 107 bits (266), Expect = 4e-23, Method: Composition-based stats.
Identities = 69/250 (27%), Positives = 130/250 (52%), Gaps = 9/250 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIA 60
+++DQ++ ++ +G G+FG +LV H+ Y +K I ++ + ++ H E ++
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
V P++V+ + ++ + + +V Y GG+M +++ P + + AQ++L
Sbjct: 97 AVNFPFLVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YAAQIVLT 153
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+YLHS +++RDLK N+ + + +++ DFG AK +K + GTP + PE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW--XLCGTPEALAPEIIL 211
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
Y D W+LG +YEMAA P F A + KI + PS +S LK L++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-RFPSHFSSDLKDLLR 270
Query: 241 GMLRKNPEHR 250
+L+ + R
Sbjct: 271 NLLQVDLTKR 280
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 34/290 (11%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 62 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIP 183
HS+ VLHRDLK N+ + + ++L DFGLA+ + V T Y PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 184 YGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCYS 232
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YK 238
Query: 233 PSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 34/290 (11%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 61 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIP 183
HS+ VLHRDLK N+ + + ++L DFGLA+ + V T Y PE+L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 184 YGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCYS 232
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YK 237
Query: 233 PSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 134/284 (47%), Gaps = 12/284 (4%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR 61
E + D +E + ++G G G V+H+ K I L + R +E+ ++
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA-IRNQIIRELQVLHE 79
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
PYIV F A+ G + I + +GG + +++KK+ PE+ L K ++ +
Sbjct: 80 CNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 136
Query: 122 DYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
YL + ++HRD+K SNI + +++L DFG++ L D +A+S VGT +YM PE L
Sbjct: 137 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQ 195
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHR----PAFKAFDMAGLISKINRSSIGPLPS-CYSPSL 235
Y +SDIWS+G + EMA R + + L+ I LPS +S
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEF 255
Query: 236 KTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPAACS 279
+ + L KNP R +L+ H F++ D F CS
Sbjct: 256 QDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEVDFAGWLCS 298
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 34/290 (11%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 62 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIP 183
HS+ VLHRDLK N+ + + ++L DFGLA+ + V T Y PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 184 YGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCYS 232
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YK 238
Query: 233 PSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 34/290 (11%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 63 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIP 183
HS+ VLHRDLK N+ + + ++L DFGLA+ + V T Y PE+L
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 180
Query: 184 YGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCYS 232
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YK 239
Query: 233 PSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+ E++G G F ++ +Y K I+ R+T+ RR +E++++
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+QHP ++ E + E V ++ GG++ + + + EE+ ++ Q+L
Sbjct: 70 EIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDV-----RLGDFGLAKTLKADDLASSVVGTPNYMC 175
V YLHS + H DLK NI L D++V ++ DFGLA + + ++ GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKINRSSIGPLPSCY 231
PE++ P G ++D+WS+G Y + + F K +A +S +N S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNT 244
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K I+ +L K+P+ R + + L+HP+++
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 129/291 (44%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + + D+ + M S P + + QLL + +
Sbjct: 65 PNIVKLLDV-IHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 240
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 10/257 (3%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
+G+G +G + + + +K+I + R + H+E+AL ++H IV++ +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 74 WVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFA-QLLLAVDYLHSNYVLHR 132
+ E G ++ I GG ++ L++ G E+ ++ Q+L + YLH N ++HR
Sbjct: 88 FSENG-FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 133 DLKCSNIFL-TKDQDVRLGDFGLAKTLKADD-LASSVVGTPNYMCPELLADIP--YGFKS 188
D+K N+ + T +++ DFG +K L + + GT YM PE++ P YG +
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAA 206
Query: 189 DIWSLGCCMYEMAAHRPAFKAF-DMAGLISKINRSSIGP-LPSCYSPSLKTLIKGMLRKN 246
DIWSLGC + EMA +P F + + K+ + P +P S K I +
Sbjct: 207 DIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPD 266
Query: 247 PEHRPSASELLKHPFLQ 263
P+ R A++LL FL+
Sbjct: 267 PDKRACANDLLVDEFLK 283
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 131/273 (47%), Gaps = 19/273 (6%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLA------RQTERCRRSAHQEMALIA 60
+Y+ + IGRG HRA ++ +K + + Q E R + +E ++
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 61 RVQ-HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+V HP+I+ +++ E ++ +V G++ + + + E++ LL
Sbjct: 155 QVAGHPHIITLIDSY-ESSSFMFLVFDLMRKGELFDYL--TEKVALSEKETRSIMRSLLE 211
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
AV +LH+N ++HRDLK NI L + +RL DFG + L+ + + GTP Y+ PE+L
Sbjct: 212 AVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEIL 271
Query: 180 ------ADIPYGFKSDIWSLGCCMYEMAAHRPAF---KAFDMAGLISKINRSSIGPLPSC 230
YG + D+W+ G ++ + A P F + M +I + P
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDD 331
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S ++K LI +L+ +PE R +A + L+HPF +
Sbjct: 332 RSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 62 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 237
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+ E++G G F ++ +Y K I+ R+T+ RR +E++++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+QHP ++ E + E V ++ GG++ + + + EE+ ++ Q+L
Sbjct: 70 EIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDV-----RLGDFGLAKTLKADDLASSVVGTPNYMC 175
V YLHS + H DLK NI L D++V ++ DFGLA + + ++ GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKINRSSIGPLPSCY 231
PE++ P G ++D+WS+G Y + + F K +A +S +N S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNT 244
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K I+ +L K+P+ R + + L+HP+++
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 65 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 240
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 64 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 239
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 20/277 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRL-------ARQTERCRRSAHQEMAL 58
+ YE E +GRG H+ K+Y +K I + A + + R + +E+ +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 59 IARVQ-HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
+ +V HP I++ K+ + E + +V + G++ + + + E++ K L
Sbjct: 64 LRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRAL 120
Query: 118 LLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPE 177
L + LH ++HRDLK NI L D +++L DFG + L + V GTP+Y+ PE
Sbjct: 121 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 180
Query: 178 LLA-----DIP-YGFKSDIWSLGCCMYEMAAHRPAF---KAFDMAGLISKINRSSIGPLP 228
++ + P YG + D+WS G MY + A P F K M +I N P
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEW 240
Query: 229 SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHF 265
YS ++K L+ L P+ R +A E L HPF Q +
Sbjct: 241 DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 277
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+ E++G G F ++ +Y K I+ R+T+ RR +E++++
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 68
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+QHP ++ E + E V ++ GG++ + + + EE+ ++ Q+L
Sbjct: 69 EIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 125
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDV-----RLGDFGLAKTLKADDLASSVVGTPNYMC 175
V YLHS + H DLK NI L D++V ++ DFGLA + + ++ GTP ++
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKINRSSIGPLPSCY 231
PE++ P G ++D+WS+G Y + + F K +A +S +N S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNT 243
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K I+ +L K+P+ R + + L+HP+++
Sbjct: 244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 64 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 239
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 64 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 239
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 106 bits (265), Expect = 7e-23, Method: Composition-based stats.
Identities = 74/272 (27%), Positives = 139/272 (51%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K I R + + + +E +++R+
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLD 87
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 141
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+S VGT Y+ PE
Sbjct: 142 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + KI + P + P +
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD-FPEKFFPKARD 260
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 261 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+ E++G G F ++ +Y K I+ R+T+ RR +E++++
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 68
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+QHP ++ E + E V ++ GG++ + + + EE+ ++ Q+L
Sbjct: 69 EIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 125
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDV-----RLGDFGLAKTLKADDLASSVVGTPNYMC 175
V YLHS + H DLK NI L D++V ++ DFGLA + + ++ GTP ++
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKINRSSIGPLPSCY 231
PE++ P G ++D+WS+G Y + + F K +A +S +N S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNT 243
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K I+ +L K+P+ R + + L+HP+++
Sbjct: 244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+ E++G G F ++ +Y K I+ R+T+ RR +E++++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+QHP ++ E + E V ++ GG++ + + + EE+ ++ Q+L
Sbjct: 70 EIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDV-----RLGDFGLAKTLKADDLASSVVGTPNYMC 175
V YLHS + H DLK NI L D++V ++ DFGLA + + ++ GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKINRSSIGPLPSCY 231
PE++ P G ++D+WS+G Y + + F K +A +S +N S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNT 244
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K I+ +L K+P+ R + + L+HP+++
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 61 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 177
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 236
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 65 PNIVKLLDV-IHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 240
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+ E++G G F ++ +Y K I+ R+T+ RR +E++++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+QHP ++ E + E V ++ GG++ + + + EE+ ++ Q+L
Sbjct: 70 EIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDV-----RLGDFGLAKTLKADDLASSVVGTPNYMC 175
V YLHS + H DLK NI L D++V ++ DFGLA + + ++ GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKINRSSIGPLPSCY 231
PE++ P G ++D+WS+G Y + + F K +A +S +N S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNT 244
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K I+ +L K+P+ R + + L+HP+++
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+ E++G G F ++ +Y K I+ R+T+ RR +E++++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+QHP ++ E + E V ++ GG++ + + + EE+ ++ Q+L
Sbjct: 70 EIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDV-----RLGDFGLAKTLKADDLASSVVGTPNYMC 175
V YLHS + H DLK NI L D++V ++ DFGLA + + ++ GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKINRSSIGPLPSCY 231
PE++ P G ++D+WS+G Y + + F K +A +S +N S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNT 244
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K I+ +L K+P+ R + + L+HP+++
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 65 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 240
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+ E++G G F ++ +Y K I+ R+T+ RR +E++++
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+QHP ++ E + E V ++ GG++ + + + EE+ ++ Q+L
Sbjct: 70 EIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDV-----RLGDFGLAKTLKADDLASSVVGTPNYMC 175
V YLHS + H DLK NI L D++V ++ DFGLA + + ++ GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKINRSSIGPLPSCY 231
PE++ P G ++D+WS+G Y + + F K +A +S +N S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNT 244
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K I+ +L K+P+ R + + L+HP+++
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 106 bits (264), Expect = 8e-23, Method: Composition-based stats.
Identities = 83/288 (28%), Positives = 135/288 (46%), Gaps = 41/288 (14%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
+E + +G+GAFG + + + + Y +KKIR TE + E+ L+A + H Y+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR---HTEEKLSTILSEVXLLASLNHQYV 64
Query: 68 VEFKEAWVEKGCYVCIVTG------------YCEGGDMAELMKKSNGAYFPEEKLCKW-- 113
V + AW+E+ +V T YCE + +L+ N +++ W
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN---LNQQRDEYWRL 121
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKT-------LKAD----- 161
F Q+L A+ Y+HS ++HR+LK NIF+ + ++V++GDFGLAK LK D
Sbjct: 122 FRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 162 ---DLASSVVGTPNYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLIS 217
D +S +GT Y+ E+L Y K D +SLG +E P + ++
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI--YPFSTGXERVNILK 239
Query: 218 KINRSSIGPLPSCYSPSLKT---LIKGMLRKNPEHRPSASELLKHPFL 262
K+ SI P K +I+ ++ +P RP A LL +L
Sbjct: 240 KLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 62 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 237
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 62 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 237
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 62 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 237
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 9/260 (3%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y E+IG+GA G A ++ ++++ L +Q ++ E+ ++ ++P
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--ELIINEILVMRENKNPN 78
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
IV + ++++ G + +V Y GG + +++ ++ E ++ + L A+++LHS
Sbjct: 79 IVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS 134
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPELLADIPYG 185
N V+HRD+K NI L D V+L DFG A+ S++VGTP +M PE++ YG
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 194
Query: 186 FKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL--PSCYSPSLKTLIKGML 243
K DIWSLG EM P + + + I + L P S + + L
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 244 RKNPEHRPSASELLKHPFLQ 263
+ E R SA ELL+H FL+
Sbjct: 255 DMDVEKRGSAKELLQHQFLK 274
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 66 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 182
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 241
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 242 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 128/293 (43%), Gaps = 36/293 (12%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV 62
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ +
Sbjct: 1 GHMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
HP IV+ + + + +V + D+ + M S P + + QLL +
Sbjct: 61 NHPNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLA 180
+ HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 181 DIPYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPS 229
Y + DIWSLGC EM R F+ F G ++ + +P
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 230 CYSPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
Y PS ++L+ ML +P R SA L HPF Q
Sbjct: 238 -YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 7/274 (2%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ Y +++ IG+G F L H K+ +K I + + +E+ ++ + H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ E +E + +V Y GG++ + + ++G +E K F Q++ AV Y
Sbjct: 73 PNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAK-FRQIVSAVQYC 129
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY 184
H +++HRDLK N+ L D ++++ DFG + + + G P Y PEL Y
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKY 189
Query: 185 -GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGML 243
G + D+WSLG +Y + + F ++ L ++ R +P S + L+K L
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKKFL 248
Query: 244 RKNPEHRPSASELLKHPFLQ--HFVDQYRPTFPP 275
NP R + +++K ++ H D+ +P P
Sbjct: 249 ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEP 282
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 63 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 179
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 238
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+ E++G G F ++ +Y K I+ R+T+ RR +E++++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+QHP ++ E + E V ++ GG++ + + + EE+ ++ Q+L
Sbjct: 70 EIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDV-----RLGDFGLAKTLKADDLASSVVGTPNYMC 175
V YLHS + H DLK NI L D++V ++ DFGLA + + ++ GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKINRSSIGPLPSCY 231
PE++ P G ++D+WS+G Y + + F K +A +S +N S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNT 244
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K I+ +L K+P+ R + + L+HP+++
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 63 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 179
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 238
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 65 PNIVKLLDV-IHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 240
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 64 PNIVKLLDV-IHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 239
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+ E++G G F ++ +Y K I+ R+T+ RR +E++++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+QHP ++ E + E V ++ GG++ + + + EE+ ++ Q+L
Sbjct: 70 EIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDV-----RLGDFGLAKTLKADDLASSVVGTPNYMC 175
V YLHS + H DLK NI L D++V ++ DFGLA + + ++ GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKINRSSIGPLPSCY 231
PE++ P G ++D+WS+G Y + + F K +A +S +N S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNT 244
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K I+ +L K+P+ R + + L+HP+++
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 145/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 102
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V +VT + G D+ +L+K + + +C + Q+L +
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVT-HLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLK 158
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 159 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 278
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 279 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 337
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 338 D---PSDEPIAEAPFK 350
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 106 bits (264), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 130/274 (47%), Gaps = 7/274 (2%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ Y +++ IG+G F L H K+ ++ I + + +E+ ++ + H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ E +E + +V Y GG++ + + ++G +E K F Q++ AV Y
Sbjct: 73 PNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAK-FRQIVSAVQYC 129
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY 184
H +++HRDLK N+ L D ++++ DFG + + + G+P Y PEL Y
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 185 -GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGML 243
G + D+WSLG +Y + + F ++ L ++ R +P S + L+K L
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKKFL 248
Query: 244 RKNPEHRPSASELLKHPFLQ--HFVDQYRPTFPP 275
NP R + +++K ++ H D+ +P P
Sbjct: 249 ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEP 282
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 106 bits (264), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 61 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 177
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 236
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 106 bits (264), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+ E++G G F ++ +Y K I+ R+T+ RR +E++++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+QHP ++ E + E V ++ GG++ + + + EE+ ++ Q+L
Sbjct: 70 EIQHPNVITLHEVY-ENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDV-----RLGDFGLAKTLKADDLASSVVGTPNYMC 175
V YLHS + H DLK NI L D++V ++ DFGLA + + ++ GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKINRSSIGPLPSCY 231
PE++ P G ++D+WS+G Y + + F K +A +S +N S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNT 244
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K I+ +L K+P+ R + + L+HP+++
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 126/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 65 PYIVEFKEAW-VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDY 123
P IV+ + E Y+ + D+ M S P + + QLL + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVH---QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 124 LHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ + V T Y PE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 236
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 137/271 (50%), Gaps = 16/271 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH---QEMALIARV 62
D YE+ E IG+G F +R +++ +K + +A+ T S +E ++ +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAY-FPEEKLCKWFAQLLLA 120
+HP+IVE E + G + +V + +G D+ E++K+++ + + E + Q+L A
Sbjct: 86 KHPHIVELLETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQD---VRLGDFGLAKTLKADDL-ASSVVGTPNYMCP 176
+ Y H N ++HRD+K + L ++ V+LG FG+A L L A VGTP++M P
Sbjct: 145 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 204
Query: 177 ELLADIPYGFKSDIWSLGCCMYEMAAHRPAF---KAFDMAGLISKINRSSIGPLP-SCYS 232
E++ PYG D+W G ++ + + F K G+I + + P S S
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK--GKYKMNPRQWSHIS 262
Query: 233 PSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K L++ ML +P R + E L HP+L+
Sbjct: 263 ESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ M S P + + QLL + +
Sbjct: 65 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 240
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 105 bits (263), Expect = 1e-22, Method: Composition-based stats.
Identities = 71/262 (27%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R +++K++L K+ Q E+ +E+ + +
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLA--REKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 61
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDM-AELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 62 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 117
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ DFG + +++ GT +Y+ PE++
Sbjct: 118 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIE 176
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 177 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLIS 235
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 236 RLLKHNPSQRPMLREVLEHPWI 257
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D +E+ ++GRGA + +K Y LK ++ + R E+ ++ R+ HP
Sbjct: 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR----TEIGVLLRLSHP 108
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
I++ KE + E + +V GG++ + + + Y+ E Q+L AV YLH
Sbjct: 109 NIIKLKEIF-ETPTEISLVLELVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLH 165
Query: 126 SNYVLHRDLKCSNIFLTK---DQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
N ++HRDLK N+ D +++ DFGL+K ++ L +V GTP Y PE+L
Sbjct: 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGC 225
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFD------MAGLISKINRSSIGPLPSCYSPSLK 236
YG + D+WS+G Y + F +D M I I P S + K
Sbjct: 226 AYGPEVDMWSVGIITYILLCGFEPF--YDERGDQFMFRRILNCEYYFISPWWDEVSLNAK 283
Query: 237 TLIKGMLRKNPEHRPSASELLKHPFL 262
L++ ++ +P+ R + + L+HP++
Sbjct: 284 DLVRKLIVLDPKKRLTTFQALQHPWV 309
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+ E++G G F ++ +Y K I+ R+T+ RR +E++++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+QHP ++ E + E V ++ GG++ + + + EE+ ++ Q+L
Sbjct: 70 EIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDV-----RLGDFGLAKTLKADDLASSVVGTPNYMC 175
V YLHS + H DLK NI L D++V ++ DFGLA + + ++ GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKINRSSIGPLPSCY 231
PE++ P G ++D+WS+G Y + + F K +A +S +N S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNT 244
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K I+ +L K+P+ R + + L+HP+++
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 145/322 (45%), Gaps = 50/322 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y ++ IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTL-REIQILLRFRHEN 102
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
++ ++ +E V IV E D+ +L+K + +C + Q+L +
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMET-DLYKLLKSQQ---LSNDHICYFLYQILRGLK 158
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ + D+++ DFGLA+ + + V T Y PE+
Sbjct: 159 YIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINM 278
Query: 219 INRSSIGPLPSCYSPSLKT-----------LIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ + LPS + L+ ML NP R + E L HP+L+ + D
Sbjct: 279 KARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYD 338
Query: 268 QYRPTFPPAACSPEKPISIAHE 289
PT P A E+P + A E
Sbjct: 339 ---PTDEPVA---EEPFTFAME 354
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 9/260 (3%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y E+IG+GA G A ++ ++++ L +Q ++ E+ ++ ++P
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--ELIINEILVMRENKNPN 78
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
IV + ++++ G + +V Y GG + +++ ++ E ++ + L A+++LHS
Sbjct: 79 IVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS 134
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPELLADIPYG 185
N V+HRD+K NI L D V+L DFG A+ S +VGTP +M PE++ YG
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYG 194
Query: 186 FKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL--PSCYSPSLKTLIKGML 243
K DIWSLG EM P + + + I + L P S + + L
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 244 RKNPEHRPSASELLKHPFLQ 263
+ E R SA ELL+H FL+
Sbjct: 255 EMDVEKRGSAKELLQHQFLK 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+ E++G G F ++ +Y K I+ R+T+ RR +E++++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+QHP ++ E + E V ++ GG++ + + + EE+ ++ Q+L
Sbjct: 70 EIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDV-----RLGDFGLAKTLKADDLASSVVGTPNYMC 175
V YLHS + H DLK NI L D++V ++ DFGLA + + ++ GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKINRSSIGPLPSCY 231
PE++ P G ++D+WS+G Y + + F K +A +S +N S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNT 244
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K I+ +L K+P+ R + + L+HP+++
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 136/282 (48%), Gaps = 26/282 (9%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR----LARQTERCRRSAHQEM 56
M+ + +EI++ IGRGAFG +V + ++ Y +K + L R C R +E
Sbjct: 85 MQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFR---EER 141
Query: 57 ALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQ 116
++ +I A+ ++ ++ +V Y GGD+ L+ K PE+ + +
Sbjct: 142 DVLVNGDCQWITALHYAFQDEN-HLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGE 199
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSV-VGTPN 172
++LA+D +H + +HRD+K N+ L + +RL DFG LK +D + SSV VGTP+
Sbjct: 200 MVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPD 257
Query: 173 YMCPELLADI-----PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI-NRSSIGP 226
Y+ PE+L + YG + D WSLG CMYEM F A + KI N
Sbjct: 258 YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ 317
Query: 227 LPSC---YSPSLKTLIKGML--RKNPEHRPSASELLKHPFLQ 263
PS S K LI+ ++ R+ + + KH F +
Sbjct: 318 FPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFE 359
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 63 PNIVKLLDV-IHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 179
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 238
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 137/271 (50%), Gaps = 16/271 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH---QEMALIARV 62
D YE+ E IG+G F +R +++ +K + +A+ T S +E ++ +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLC-KWFAQLLLA 120
+HP+IVE E + G + +V + +G D+ E++K+++ + E + + Q+L A
Sbjct: 84 KHPHIVELLETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQD---VRLGDFGLAKTLKADDL-ASSVVGTPNYMCP 176
+ Y H N ++HRD+K + L ++ V+LG FG+A L L A VGTP++M P
Sbjct: 143 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 177 ELLADIPYGFKSDIWSLGCCMYEMAAHRPAF---KAFDMAGLISKINRSSIGPLP-SCYS 232
E++ PYG D+W G ++ + + F K G+I + + P S S
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK--GKYKMNPRQWSHIS 260
Query: 233 PSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K L++ ML +P R + E L HP+L+
Sbjct: 261 ESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 136/282 (48%), Gaps = 26/282 (9%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR----LARQTERCRRSAHQEM 56
M+ + +EI++ IGRGAFG +V + ++ Y +K + L R C R +E
Sbjct: 69 MQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFR---EER 125
Query: 57 ALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQ 116
++ +I A+ ++ ++ +V Y GGD+ L+ K PE+ + +
Sbjct: 126 DVLVNGDCQWITALHYAFQDEN-HLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGE 183
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSV-VGTPN 172
++LA+D +H + +HRD+K N+ L + +RL DFG LK +D + SSV VGTP+
Sbjct: 184 MVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPD 241
Query: 173 YMCPELLADI-----PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI-NRSSIGP 226
Y+ PE+L + YG + D WSLG CMYEM F A + KI N
Sbjct: 242 YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ 301
Query: 227 LPSC---YSPSLKTLIKGML--RKNPEHRPSASELLKHPFLQ 263
PS S K LI+ ++ R+ + + KH F +
Sbjct: 302 FPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFE 343
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 18/265 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 68 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 123
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGL---AKTLKADDLASSVVGTPNYMCPE 177
+ Y HS V+HRD+K N+ L ++++ DFG A + + DDL GT +Y+ PE
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPE 179
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
++ + K D+WSLG YE +P F+A +I+R P + +
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARD 238
Query: 238 LIKGMLRKNPEHRPSASELLKHPFL 262
LI +L+ NP RP E+L+HP++
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 36/291 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 62 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPELLADI 182
HS+ VLHRDLK N+ + + ++L DFGLA+ VV T Y PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 183 PYGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCY 231
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-Y 237
Query: 232 SPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 7/274 (2%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ Y +++ IG+G F L H K+ +K I + + +E+ ++ + H
Sbjct: 6 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 65
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ E +E + +V Y GG++ + + ++G +E K F Q++ AV Y
Sbjct: 66 PNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLV-AHGWMKEKEARAK-FRQIVSAVQYC 122
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY 184
H +++HRDLK N+ L D ++++ DFG + + + G+P Y PEL Y
Sbjct: 123 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 182
Query: 185 -GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGML 243
G + D+WSLG +Y + + F ++ L ++ R +P S + L+K L
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKKFL 241
Query: 244 RKNPEHRPSASELLKHPFLQ--HFVDQYRPTFPP 275
NP R + +++K ++ H D+ +P P
Sbjct: 242 ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEP 275
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 20/272 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+ E++G G F ++ +Y K I+ R+T+ RR +E++++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+QHP ++ E + E V ++ GG++ + + + EE+ ++ Q+L
Sbjct: 70 EIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNG 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDV-----RLGDFGLAKTLKADDLASSVVGTPNYMC 175
V YLHS + H DLK NI L D++V ++ DFGLA + + ++ GTP ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKINRSSIGPLPSCY 231
PE++ P G ++D+WS+G Y + + F K +A +S +N S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNT 244
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K I+ +L K+P+ R + + L+HP+++
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 133/270 (49%), Gaps = 15/270 (5%)
Query: 1 MESR-----MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSA 52
MES+ ++ +EI +G+G FG L R ++ K++L K+ Q E+
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 53 HQEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK 112
+E+ + + ++HP I+ + V ++ Y G++ + ++K + F E++
Sbjct: 61 RREVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTAT 117
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN 172
+ +L A+ Y HS V+HRD+K N+ L ++++ DFG + +++ GT +
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLD 176
Query: 173 YMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYS 232
Y+ PE++ + K D+WSLG YE +P F+A +I+R P +
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVT 235
Query: 233 PSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
+ LI +L+ NP RP E+L+HP++
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 81
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 82 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ DFG + +++ GT +Y+ PE++
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIE 196
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 197 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLIS 255
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 256 RLLKHNPSQRPMLREVLEHPWI 277
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 139/272 (51%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K + R + + + +E +++R+
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 93
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 94 HPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 147
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y+ PE
Sbjct: 148 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + KI + P+ + P +
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPAAFFPKARD 266
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 267 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 298
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 7/274 (2%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ Y +++ IG+G F L H K+ ++ I + + +E+ ++ + H
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ E +E + +V Y GG++ + + ++G +E K F Q++ AV Y
Sbjct: 73 PNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAK-FRQIVSAVQYC 129
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY 184
H +++HRDLK N+ L D ++++ DFG + + G+P Y PEL Y
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKY 189
Query: 185 -GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGML 243
G + D+WSLG +Y + + F ++ L ++ R +P S + L+K L
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKKFL 248
Query: 244 RKNPEHRPSASELLKHPFLQ--HFVDQYRPTFPP 275
NP R + +++K ++ H D+ +P P
Sbjct: 249 ILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEP 282
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 9/260 (3%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y E+IG+GA G A ++ ++++ L +Q ++ E+ ++ ++P
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--ELIINEILVMRENKNPN 78
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
IV + ++++ G + +V Y GG + +++ ++ E ++ + L A+++LHS
Sbjct: 79 IVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS 134
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPELLADIPYG 185
N V+HRD+K NI L D V+L DFG A+ S +VGTP +M PE++ YG
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYG 194
Query: 186 FKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL--PSCYSPSLKTLIKGML 243
K DIWSLG EM P + + + I + L P S + + L
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 244 RKNPEHRPSASELLKHPFLQ 263
+ E R SA ELL+H FL+
Sbjct: 255 DMDVEKRGSAKELLQHQFLK 274
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 138/310 (44%), Gaps = 41/310 (13%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
+G GA+G+ + +K +KK+ Q+E + A++E+ L+ +QH ++ +
Sbjct: 49 HVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
+ Y M ++K G F EEK+ Q+L + Y+HS V+HR
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHR 168
Query: 133 DLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPE-LLADIPYGFKSDIW 191
DLK N+ + +D ++++ DFGLA+ AD + V T Y PE +L+ + Y DIW
Sbjct: 169 DLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIW 226
Query: 192 SLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN----RSSIGPLPSC-- 230
S+GC M EM + FK D + K+N +S I LP
Sbjct: 227 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR 286
Query: 231 ---------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPAACSPE 281
SP L++ ML + + R +A++ L HPF + F D P +
Sbjct: 287 KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRD------PEEETEAQ 340
Query: 282 KPI--SIAHE 289
+P S+ HE
Sbjct: 341 QPFDDSLEHE 350
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 139/272 (51%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K I R + + + +E +++R+
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLD 91
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 145
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+S VGT Y+ PE
Sbjct: 146 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + KI + P + P +
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARD 264
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 265 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 138/310 (44%), Gaps = 41/310 (13%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
+G GA+G+ + +K +KK+ Q+E + A++E+ L+ +QH ++ +
Sbjct: 31 HVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
+ Y M ++K G F EEK+ Q+L + Y+HS V+HR
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHR 150
Query: 133 DLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPE-LLADIPYGFKSDIW 191
DLK N+ + +D ++++ DFGLA+ AD + V T Y PE +L+ + Y DIW
Sbjct: 151 DLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIW 208
Query: 192 SLGCCMYEMAAHRPAFKAFDMAG---------------LISKIN----RSSIGPLPSC-- 230
S+GC M EM + FK D + K+N +S I LP
Sbjct: 209 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR 268
Query: 231 ---------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPAACSPE 281
SP L++ ML + + R +A++ L HPF + F D P +
Sbjct: 269 KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRD------PEEETEAQ 322
Query: 282 KPI--SIAHE 289
+P S+ HE
Sbjct: 323 QPFDDSLEHE 332
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 139/274 (50%), Gaps = 22/274 (8%)
Query: 4 RMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIAR 61
R + ++ + +G G+F +L A ++Y +K I R + + + +E +++R
Sbjct: 8 RPEDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSR 66
Query: 62 VQHPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLL 118
+ HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIV 120
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMC 175
A++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y+
Sbjct: 121 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSL 235
PELL + SD+W+LGC +Y++ A P F+A + + KI + P + P
Sbjct: 181 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD-FPEKFFPKA 239
Query: 236 KTLIKGMLRKNPEHRPSASE------LLKHPFLQ 263
+ L++ +L + R E L HPF +
Sbjct: 240 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 273
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 137/291 (47%), Gaps = 37/291 (12%)
Query: 4 RMDQYEIMEQIGRGAFGAAILVNHRAEKKKY---VLKKIRLARQTERCR----------- 49
+++QY + ++IG+G++G L + + Y VL K +L RQ R
Sbjct: 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAP 70
Query: 50 ----------RSAHQEMALIARVQHPYIVEFKEAW---VEKGCYVCIVTGYCEGGDMAEL 96
+QE+A++ ++ HP +V+ E E Y+ E + +
Sbjct: 71 GGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVF-----ELVNQGPV 125
Query: 97 MKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAK 156
M+ E++ +F L+ ++YLH ++HRD+K SN+ + +D +++ DFG++
Sbjct: 126 MEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSN 185
Query: 157 TLKADD-LASSVVGTPNYMCPELLAD---IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM 212
K D L S+ VGTP +M PE L++ I G D+W++G +Y + F +
Sbjct: 186 EFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245
Query: 213 AGLISKINRSSI-GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
L SKI ++ P + LK LI ML KNPE R E+ HP++
Sbjct: 246 MCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 135/293 (46%), Gaps = 36/293 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M +YE +E+IG G +G +R + LK++RL E SA +E+ L+ ++H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
IV + + + +V +C+ D+ + NG PE + + QLL + +
Sbjct: 61 KNIVRLHDV-LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPE-IVKSFLFQLLKGLGFC 117
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIP 183
HS VLHRDLK N+ + ++ +++L DFGLA+ S+ V T Y P++L
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 184 -YGFKSDIWSLGCCMYEMA-AHRPAFKAFDMAGLISKINRS----------SIGPLPSCY 231
Y D+WS GC E+A A RP F D+ + +I R S+ LP Y
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD-Y 236
Query: 232 SP-------------------SLKTLIKGMLRKNPEHRPSASELLKHPFLQHF 265
P + + L++ +L+ NP R SA E L+HP+ F
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
+ ++ +E+IG G +G ++ + LKKIRL +TE +A +E++L+ + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
IV+ + + + +V + D+ + M S P + + QLL + + H
Sbjct: 62 NIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 126 SNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIPY 184
S+ VLHRDLK N+ + + ++L DFGLA+ + V T Y PE+L Y
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 185 GFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCYSP 233
+ DIWSLGC EM R F+ F G ++ + +P Y P
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKP 238
Query: 234 SL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S ++L+ ML +P R SA L HPF Q
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 9/260 (3%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y E+IG+GA G A ++ ++++ L +Q ++ E+ ++ ++P
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--ELIINEILVMRENKNPN 79
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
IV + ++++ G + +V Y GG + +++ ++ E ++ + L A+++LHS
Sbjct: 80 IVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS 135
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPELLADIPYG 185
N V+HRD+K NI L D V+L DFG A+ S +VGTP +M PE++ YG
Sbjct: 136 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYG 195
Query: 186 FKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL--PSCYSPSLKTLIKGML 243
K DIWSLG EM P + + + I + L P S + + L
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 255
Query: 244 RKNPEHRPSASELLKHPFLQ 263
+ E R SA EL++H FL+
Sbjct: 256 EMDVEKRGSAKELIQHQFLK 275
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 10/257 (3%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
+G+G +G + + + +K+I + R + H+E+AL ++H IV++ +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 74 WVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFA-QLLLAVDYLHSNYVLHR 132
+ E G ++ I GG ++ L++ G E+ ++ Q+L + YLH N ++HR
Sbjct: 74 FSENG-FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 132
Query: 133 DLKCSNIFL-TKDQDVRLGDFGLAKTLKADD-LASSVVGTPNYMCPELLADIP--YGFKS 188
D+K N+ + T +++ DFG +K L + + GT YM PE++ P YG +
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAA 192
Query: 189 DIWSLGCCMYEMAAHRPAFKAF-DMAGLISKINRSSIGP-LPSCYSPSLKTLIKGMLRKN 246
DIWSLGC + EMA +P F + + K+ + P +P S K I +
Sbjct: 193 DIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPD 252
Query: 247 PEHRPSASELLKHPFLQ 263
P+ R A++LL FL+
Sbjct: 253 PDKRACANDLLVDEFLK 269
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 127/290 (43%), Gaps = 34/290 (11%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + L KIRL +TE +A +E++L+ + H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 62 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIP 183
HS+ VLHRDLK N+ + + ++L DFGLA+ + V T Y PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 184 YGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCYS 232
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YK 238
Query: 233 PSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 127/290 (43%), Gaps = 34/290 (11%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ ++ +E+IG G +G ++ + L KIRL +TE +A +E++L+ + H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ + + + +V + D+ + M S P + + QLL + +
Sbjct: 61 PNIVKLLDV-IHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIP 183
HS+ VLHRDLK N+ + + ++L DFGLA+ + V T Y PE+L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 184 YGFKS-DIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIGPLPSCYS 232
Y + DIWSLGC EM R F+ F G ++ + +P Y
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YK 237
Query: 233 PSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PS ++L+ ML +P R SA L HPF Q
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 129/291 (44%), Gaps = 35/291 (12%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYV-LKKIRLARQTERCRRSAHQEMALIARVQ-- 63
QYE + +IG GA+G ++V LK++R+ E S +E+A++ ++
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 64 -HPYIVEFKEAWV----EKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
HP +V + ++ + +V + + D+ + K P E + QLL
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPEL 178
+D+LHS+ V+HRDLK NI +T ++L DFGLA+ +SVV T Y PE+
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 179 LADIPYGFKSDIWSLGCCMYEMAAHRPAF----------KAFDMAGLISKIN--RSSIGP 226
L Y D+WS+GC EM +P F K D+ GL + + R P
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 250
Query: 227 LPSCYSPSL--------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
+ +S S K L+ L NP R SA L HP+ Q
Sbjct: 251 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 73/272 (26%), Positives = 138/272 (50%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K I R + + + +E +++R+
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLD 87
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 141
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y+ PE
Sbjct: 142 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + KI + P + P +
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD-FPEKFFPKARD 260
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 261 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 139/272 (51%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K I R + + + +E +++R+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLD 90
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 144
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y+ PE
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + +KI + P + P +
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY-DFPEKFFPKARD 263
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 133/277 (48%), Gaps = 16/277 (5%)
Query: 4 RMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-----KIRLARQTERCRRSAHQEMAL 58
++ Y + + +G G FG + H K +K KIR + RR E+
Sbjct: 14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRR----EIQN 69
Query: 59 IARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
+ +HP+I++ + + + +V Y GG++ + + K NG E++ + F Q+L
Sbjct: 70 LKLFRHPHIIKLYQV-ISTPSDIFMVMEYVSGGELFDYICK-NGR-LDEKESRRLFQQIL 126
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPEL 178
VDY H + V+HRDLK N+ L + ++ DFGL+ + + G+PNY PE+
Sbjct: 127 SGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEV 186
Query: 179 LADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
++ Y G + DIWS G +Y + F + L KI I P +PS+ +
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKIC-DGIFYTPQYLNPSVIS 245
Query: 238 LIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFP 274
L+K ML+ +P R + ++ +H + + + +Y FP
Sbjct: 246 LLKHMLQVDPMKRATIKDIREHEWFKQDLPKY--LFP 280
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 104 bits (260), Expect = 3e-22, Method: Composition-based stats.
Identities = 73/272 (26%), Positives = 139/272 (51%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K I R + + + +E +++R+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLD 90
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 144
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y+ PE
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + +KI + P + P +
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYD-FPEKFFPKARD 263
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 82
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 138
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINL 258
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 318 D---PSDEPIAEAPFK 330
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 34/290 (11%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQ--- 63
+YE + +IG GA+G LK +R+ E S +E+AL+ R++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 64 HPYIVEFKEAWV----EKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
HP +V + ++ V +V + + D+ + K+ P E + Q L
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+D+LH+N ++HRDLK NI +T V+L DFGLA+ + VV T Y PE+L
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVL 183
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAF----------KAFDMAGLISK--------INR 221
Y D+WS+GC EM +P F K FD+ GL + + R
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR 243
Query: 222 SSI---GPLP-SCYSPSLK----TLIKGMLRKNPEHRPSASELLKHPFLQ 263
+ GP P P ++ L+ ML NP R SA L+H +L
Sbjct: 244 GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 138/272 (50%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K I R + + + +E +++R+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLD 90
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G + + ++K G++ ++ C F A+++ A
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGL--SYAKNGCLLKYIRKI-GSF---DETCTRFYTAEIVSA 144
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+S VGT Y+ PE
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + KI + P + P +
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARD 263
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 131/270 (48%), Gaps = 15/270 (5%)
Query: 1 MESR-----MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSA 52
MES+ ++ +EI +G+G FG L R ++ K++L K+ Q E+
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 53 HQEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK 112
+E+ + + ++HP I+ + V ++ Y G++ + ++K + F E++
Sbjct: 61 RREVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTAT 117
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN 172
+ +L A+ Y HS V+HRD+K N+ L ++++ DFG + + GT +
Sbjct: 118 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLXGTLD 176
Query: 173 YMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYS 232
Y+ PE++ + K D+WSLG YE +P F+A +I+R P +
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVT 235
Query: 233 PSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
+ LI +L+ NP RP E+L+HP++
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 65 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ DFG + + +++ GT +Y+ PE++
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIE 179
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLIS 238
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWI 260
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 17/271 (6%)
Query: 1 MESR-----MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSA 52
MES+ ++ +EI +G+G FG L R ++ K++L K+ Q E+
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 53 HQEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLC 111
+E+ + + ++HP I+ + V ++ Y G + EL K S F E++
Sbjct: 59 RREVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTA 114
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP 171
+ +L A+ Y HS V+HRD+K N+ L ++++ DFG + +++ GT
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTL 173
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY 231
+Y+ PE++ + K D+WSLG YE +P F+A +I+R P
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFV 232
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
+ + LI +L+ NP RP E+L+HP++
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 139/272 (51%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K + R + + + +E +++R+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 88
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 142
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A++ VGT Y+ PE
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + KI + P + P +
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARD 261
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 262 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 103 bits (258), Expect = 4e-22, Method: Composition-based stats.
Identities = 73/272 (26%), Positives = 138/272 (50%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K I R + + + +E +++R+
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLD 72
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 73 HPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y+ PE
Sbjct: 127 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + KI + P + P +
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD-FPEKFFPKARD 245
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 246 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 277
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 132/271 (48%), Gaps = 17/271 (6%)
Query: 1 MESR-----MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSA 52
MES+ ++ +EI +G+G FG L R ++ K++L K+ Q E+
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 53 HQEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLC 111
+E+ + + ++HP I+ + V ++ Y G + EL K S F E++
Sbjct: 61 RREVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTA 116
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP 171
+ +L A+ Y HS V+HRD+K N+ L ++++ DFG + + +++ GT
Sbjct: 117 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTL 175
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY 231
+Y+ PE++ + K D+WSLG YE +P F+A +I+R P
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFV 234
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
+ + LI +L+ NP RP E+L+HP++
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 139/295 (47%), Gaps = 28/295 (9%)
Query: 4 RMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR----LARQTERCRRSAHQEMALI 59
++ + + +G+G+FG +L + + ++ Y +K ++ + C + +AL+
Sbjct: 17 KLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 60 ARVQHPYIVEFKEAW--VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
+ P++ + + V++ + V Y GGD+ +++ F E + + A++
Sbjct: 77 DK--PPFLTQLHSCFQTVDR---LYFVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEI 129
Query: 118 LLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS-SVVGTPNYMCP 176
+ + +LH +++RDLK N+ L + +++ DFG+ K D + + GTP+Y+ P
Sbjct: 130 SIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAP 189
Query: 177 ELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLK 236
E++A PYG D W+ G +YEM A +P F D L I ++ P S
Sbjct: 190 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS-YPKSLSKEAV 248
Query: 237 TLIKGMLRKNPEHRPSAS-----ELLKHPFLQHFVD-------QYRPTFPPAACS 279
++ KG++ K+P R ++ +H F + +D + +P F P C
Sbjct: 249 SICKGLMTKHPAKRLGCGPEGERDVREHAFFRR-IDWEKLENREIQPPFKPKVCG 302
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 122/265 (46%), Gaps = 14/265 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D+YE+++ IG G FG A L+ +K+ L ++ + E+ + +E+ ++HP
Sbjct: 19 DRYELVKDIGAGNFGVARLMR---DKQANELVAVKYIERGEKIDENVKREIINHRSLRHP 75
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
IV FKE + ++ IV Y GG++ E + N F E++ +F QL+ V Y H
Sbjct: 76 NIVRFKEV-ILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYAH 132
Query: 126 SNYVLHRDLKCSNIFLTKDQDVRL--GDFGLAKTLKADDLASSVVGTPNYMCPELLADIP 183
+ V HRDLK N L RL DFG +K S VGTP Y+ PE+L
Sbjct: 133 AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKE 192
Query: 184 Y-GFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKI-NRSSIGPLPSCYSPSLKT 237
Y G +D+WS G +Y M F + + I +I N P SP +
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 238 LIKGMLRKNPEHRPSASELLKHPFL 262
LI + +P R S E+ H +
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 127/290 (43%), Gaps = 34/290 (11%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQ--- 63
+YE + +IG GA+G LK +R+ E S +E+AL+ R++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 64 HPYIVEFKEAWV----EKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
HP +V + ++ V +V + + D+ + K+ P E + Q L
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+D+LH+N ++HRDLK NI +T V+L DFGLA+ VV T Y PE+L
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVL 183
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAF----------KAFDMAGLISK--------INR 221
Y D+WS+GC EM +P F K FD+ GL + + R
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR 243
Query: 222 SSI---GPLP-SCYSPSLK----TLIKGMLRKNPEHRPSASELLKHPFLQ 263
+ GP P P ++ L+ ML NP R SA L+H +L
Sbjct: 244 GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 68 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 123
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ DFG + + A ++ GT +Y+ PE++
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMIE 182
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLIS 241
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWI 263
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 126/268 (47%), Gaps = 14/268 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKI--RLARQTER--CRRSAHQEMALIAR 61
D Y+I E++G G F ++ +Y K I R +R + R CR +E++++ +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
V HP I+ + + E V ++ GG++ + + + EE+ + Q+L V
Sbjct: 72 VLHPNIITLHDVY-ENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGV 128
Query: 122 DYLHSNYVLHRDLKCSNIFLTKDQ----DVRLGDFGLAKTLKADDLASSVVGTPNYMCPE 177
+YLH+ + H DLK NI L ++L DFGLA ++ ++ GTP ++ PE
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE 188
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPS--- 234
++ P G ++D+WS+G Y + + F ++ I S +S +
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 235 LKTLIKGMLRKNPEHRPSASELLKHPFL 262
K I+ +L K R + E L+HP++
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 39/280 (13%)
Query: 11 MEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH-PYIVE 69
+ +IGRGA+G+ + H+ + +K+IR + E+ ++ ++ ++ R PYIV+
Sbjct: 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIR-STVDEKEQKQLLMDLDVVMRSSDCPYIVQ 85
Query: 70 FKEAWVEKG-CYVCIVTGYCEGGDMAELMKKSNGAYF-----------PEEKLCKWFAQL 117
F A +G C++C+ ELM S ++ PEE L K
Sbjct: 86 FYGALFREGDCWICM-----------ELMSTSFDKFYKYVYSVLDDVIPEEILGKITLAT 134
Query: 118 LLAVDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCP 176
+ A+++L N ++HRD+K SNI L + +++L DFG++ L + G YM P
Sbjct: 135 VKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAP 194
Query: 177 ELL----ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSC-- 230
E + + Y +SD+WSLG +YE+A R + ++ + ++ + G P
Sbjct: 195 ERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN--SVFDQLTQVVKGDPPQLSN 252
Query: 231 -----YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHF 265
+SPS + L K+ RP ELLKHPF+ +
Sbjct: 253 SEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 39 IRLARQTERCRRSAHQEMALIARVQHPYIVEFKEAWVEKGCYVC 82
+ L + +R ++E+ ++HP+I+ ++E VE CYVC
Sbjct: 266 VNLCLTKDESKRPKYKEL-----LKHPFILMYEERAVEVACYVC 304
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 82
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 138
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINL 258
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 318 D---PSDEPIAEAPFK 330
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 138/272 (50%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K I R + + + +E +++R+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLD 90
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 144
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y+ PE
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + KI + P + P +
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARD 263
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 138/272 (50%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K I R + + + +E +++R+
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLD 88
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 142
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y+ PE
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + KI + P + P +
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARD 261
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 262 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 138/272 (50%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K + R + + + +E +++R+
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 91
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 145
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y+ PE
Sbjct: 146 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + KI + P + P +
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARD 264
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 265 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 65 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ DFG + + + + GT +Y+ PE++
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTELCGTLDYLPPEMIE 179
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLIS 238
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWI 260
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 65
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 66 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 121
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ DFG + + +++ GT +Y+ PE++
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR-RTTLSGTLDYLPPEMIE 180
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLIS 239
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWI 261
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 138/272 (50%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K + R + + + +E +++R+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 88
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 142
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y+ PE
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + KI + P + P +
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARD 261
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 262 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 103 bits (257), Expect = 5e-22, Method: Composition-based stats.
Identities = 74/276 (26%), Positives = 140/276 (50%), Gaps = 22/276 (7%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALI 59
+ R + ++ + +G G+F +L A ++Y +K I R + + + +E ++
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVM 61
Query: 60 ARVQHPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQ 116
+R+ HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+
Sbjct: 62 SRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAE 115
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNY 173
++ A++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y
Sbjct: 116 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 174 MCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSP 233
+ PELL + SD+W+LGC +Y++ A P F+A + + KI + P + P
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD-FPEKFFP 234
Query: 234 SLKTLIKGMLRKNPEHRPSASE------LLKHPFLQ 263
+ L++ +L + R E L HPF +
Sbjct: 235 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 270
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 130/260 (50%), Gaps = 9/260 (3%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y E+IG+GA G A ++ ++++ L +Q ++ E+ ++ ++P
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--ELIINEILVMRENKNPN 79
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
IV + ++++ G + +V Y GG + +++ ++ E ++ + L A+++LHS
Sbjct: 80 IVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS 135
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGL-AKTLKADDLASSVVGTPNYMCPELLADIPYG 185
N V+HR++K NI L D V+L DFG A+ S++VGTP +M PE++ YG
Sbjct: 136 NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 195
Query: 186 FKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL--PSCYSPSLKTLIKGML 243
K DIWSLG EM P + + + I + L P S + + L
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 255
Query: 244 RKNPEHRPSASELLKHPFLQ 263
+ E R SA EL++H FL+
Sbjct: 256 EMDVEKRGSAKELIQHQFLK 275
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 103 bits (257), Expect = 5e-22, Method: Composition-based stats.
Identities = 74/276 (26%), Positives = 140/276 (50%), Gaps = 22/276 (7%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALI 59
+ R + ++ + +G G+F +L A ++Y +K I R + + + +E ++
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVM 62
Query: 60 ARVQHPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQ 116
+R+ HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+
Sbjct: 63 SRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAE 116
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNY 173
++ A++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y
Sbjct: 117 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 174 MCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSP 233
+ PELL + SD+W+LGC +Y++ A P F+A + + KI + P + P
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD-FPEKFFP 235
Query: 234 SLKTLIKGMLRKNPEHRPSASE------LLKHPFLQ 263
+ L++ +L + R E L HPF +
Sbjct: 236 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 103 bits (257), Expect = 5e-22, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 129/278 (46%), Gaps = 9/278 (3%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR 61
+ + Y +++ IG+G F L H K+ +K I + + +E+ +
Sbjct: 10 QPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKV 69
Query: 62 VQHPYIVE-FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+ HP IV+ F+ EK Y +V Y GG++ + + ++G +E K F Q++ A
Sbjct: 70 LNHPNIVKLFEVIETEKTLY--LVXEYASGGEVFDYLV-AHGRXKEKEARAK-FRQIVSA 125
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
V Y H +++HRDLK N+ L D ++++ DFG + + + G P Y PEL
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQ 185
Query: 181 DIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
Y G + D+WSLG +Y + + F ++ L ++ R +P S + L+
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYXSTDCENLL 244
Query: 240 KGMLRKNPEHRPSASELLKHPF--LQHFVDQYRPTFPP 275
K L NP R + ++ K + + H D+ +P P
Sbjct: 245 KKFLILNPSKRGTLEQIXKDRWXNVGHEDDELKPYVEP 282
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 138/272 (50%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K + R + + + +E +++R+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 88
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 142
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y+ PE
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + KI + P + P +
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARD 261
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 262 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 123/265 (46%), Gaps = 14/265 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D+YE+++ IG G FG A L+ +K+ L ++ + E+ + +E+ ++HP
Sbjct: 19 DRYELVKDIGSGNFGVARLMR---DKQSNELVAVKYIERGEKIAANVKREIINHRSLRHP 75
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
IV FKE + ++ IV Y GG++ E + N F E++ +F QL+ V Y H
Sbjct: 76 NIVRFKEV-ILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 126 SNYVLHRDLKCSNIFLTKDQDVRLG--DFGLAKTLKADDLASSVVGTPNYMCPELLADIP 183
+ V HRDLK N L RL DFG +K+ S VGTP Y+ PE+L
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 184 Y-GFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKI-NRSSIGPLPSCYSPSLKT 237
Y G +D+WS G +Y M F + + I +I N P SP +
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 238 LIKGMLRKNPEHRPSASELLKHPFL 262
LI + +P R S E+ H +
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 15/271 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYV-LKKIRLARQTERCRRSAHQEMALIARVQH 64
D + +GRG FG +A K Y K + + + + A E ++A+V
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKK--SNGAYFPEEKLCKWFAQLLLAVD 122
+IV A+ E +C+V GGD+ + + F E + + AQ++ ++
Sbjct: 245 RFIVSLAYAF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS-SVVGTPNYMCPELLAD 181
+LH +++RDLK N+ L D +VR+ D GLA LKA + GTP +M PELL
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKA----FDMAGLISKINRSSIGPLPSCYSPSLKT 237
Y F D ++LG +YEM A R F+A + L ++ ++ P +SP+ K
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV-TYPDKFSPASKD 422
Query: 238 LIKGMLRKNPEHR-----PSASELLKHPFLQ 263
+ +L+K+PE R S L HP +
Sbjct: 423 FCEALLQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 6/204 (2%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR 61
E + D +E + ++G G G V+H+ K I L + R +E+ ++
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA-IRNQIIRELQVLHE 122
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
PYIV F A+ G + I + +GG + +++KK+ PE+ L K ++ +
Sbjct: 123 CNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 179
Query: 122 DYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
YL + ++HRD+K SNI + +++L DFG++ L D +A+S VGT +YM PE L
Sbjct: 180 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQ 238
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHR 204
Y +SDIWS+G + EMA R
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 138/272 (50%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K I R + + + +E +++R+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLD 90
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 144
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y+ PE
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + KI + P + P +
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARD 263
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 138/272 (50%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K + R + + + +E +++R+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 90
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 144
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y+ PE
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + KI + P + P +
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARD 263
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 128/265 (48%), Gaps = 18/265 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 65
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 66 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 121
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGL---AKTLKADDLASSVVGTPNYMCPE 177
+ Y HS V+HRD+K N+ L ++++ DFG A + + D L GT +Y+ PE
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC----GTLDYLPPE 177
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
++ + K D+WSLG YE +P F+A +I+R P + +
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARD 236
Query: 238 LIKGMLRKNPEHRPSASELLKHPFL 262
LI +L+ NP RP E+L+HP++
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 128/265 (48%), Gaps = 18/265 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 65
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 66 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 121
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGL---AKTLKADDLASSVVGTPNYMCPE 177
+ Y HS V+HRD+K N+ L ++++ DFG A + + DL GT +Y+ PE
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE 177
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
++ + K D+WSLG YE +P F+A +I+R P + +
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARD 236
Query: 238 LIKGMLRKNPEHRPSASELLKHPFL 262
LI +L+ NP RP E+L+HP++
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 128/265 (48%), Gaps = 18/265 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 70 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 125
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGL---AKTLKADDLASSVVGTPNYMCPE 177
+ Y HS V+HRD+K N+ L ++++ DFG A + + DL GT +Y+ PE
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE 181
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
++ + K D+WSLG YE +P F+A +I+R P + +
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARD 240
Query: 238 LIKGMLRKNPEHRPSASELLKHPFL 262
LI +L+ NP RP E+L+HP++
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 65 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ DFG + + A ++ GT +Y+ PE++
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMIE 179
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLIS 238
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWI 260
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 135/293 (46%), Gaps = 36/293 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M +YE +E+IG G +G +R + LK++RL E SA +E+ L+ ++H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
IV + + + +V +C+ D+ + NG PE + + QLL + +
Sbjct: 61 KNIVRLHDV-LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPE-IVKSFLFQLLKGLGFC 117
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTPNYMCPELLADIP 183
HS VLHRDLK N+ + ++ +++L +FGLA+ S+ V T Y P++L
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 184 -YGFKSDIWSLGCCMYEMA-AHRPAFKAFDMAGLISKINRS----------SIGPLPSCY 231
Y D+WS GC E+A A RP F D+ + +I R S+ LP Y
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD-Y 236
Query: 232 SP-------------------SLKTLIKGMLRKNPEHRPSASELLKHPFLQHF 265
P + + L++ +L+ NP R SA E L+HP+ F
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 127/290 (43%), Gaps = 34/290 (11%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQ--- 63
+YE + +IG GA+G LK +R+ E S +E+AL+ R++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 64 HPYIVEFKEAWV----EKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
HP +V + ++ V +V + + D+ + K+ P E + Q L
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+D+LH+N ++HRDLK NI +T V+L DFGLA+ VV T Y PE+L
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVL 183
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAF----------KAFDMAGLISK--------INR 221
Y D+WS+GC EM +P F K FD+ GL + + R
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR 243
Query: 222 SSI---GPLP-SCYSPSLK----TLIKGMLRKNPEHRPSASELLKHPFLQ 263
+ GP P P ++ L+ ML NP R SA L+H +L
Sbjct: 244 GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 15/271 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYV-LKKIRLARQTERCRRSAHQEMALIARVQH 64
D + +GRG FG +A K Y K + + + + A E ++A+V
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKK--SNGAYFPEEKLCKWFAQLLLAVD 122
+IV A+ E +C+V GGD+ + + F E + + AQ++ ++
Sbjct: 245 RFIVSLAYAF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS-SVVGTPNYMCPELLAD 181
+LH +++RDLK N+ L D +VR+ D GLA LKA + GTP +M PELL
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKA----FDMAGLISKINRSSIGPLPSCYSPSLKT 237
Y F D ++LG +YEM A R F+A + L ++ ++ P +SP+ K
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV-TYPDKFSPASKD 422
Query: 238 LIKGMLRKNPEHR-----PSASELLKHPFLQ 263
+ +L+K+PE R S L HP +
Sbjct: 423 FCEALLQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 82
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 138
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 258
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 318 D---PSDEPIAEAPFK 330
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 128/265 (48%), Gaps = 18/265 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 65 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGL---AKTLKADDLASSVVGTPNYMCPE 177
+ Y HS V+HRD+K N+ L ++++ DFG A + + DL GT +Y+ PE
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE 176
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
++ + K D+WSLG YE +P F+A +I+R P + +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARD 235
Query: 238 LIKGMLRKNPEHRPSASELLKHPFL 262
LI +L+ NP RP E+L+HP++
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 102 bits (255), Expect = 8e-22, Method: Composition-based stats.
Identities = 74/276 (26%), Positives = 140/276 (50%), Gaps = 22/276 (7%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALI 59
+ R + ++ + +G G+F +L A ++Y +K I R + + + +E ++
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVM 63
Query: 60 ARVQHPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQ 116
+R+ HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+
Sbjct: 64 SRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAE 117
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNY 173
++ A++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y
Sbjct: 118 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 174 MCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSP 233
+ PELL + SD+W+LGC +Y++ A P F+A + + KI + P + P
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD-FPEKFFP 236
Query: 234 SLKTLIKGMLRKNPEHRPSASE------LLKHPFLQ 263
+ L++ +L + R E L HPF +
Sbjct: 237 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 272
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 138/272 (50%), Gaps = 22/272 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQ 63
+ ++ + +G G+F +L A ++Y +K + R + + + +E +++R+
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILE-KRHIIKENKVPYVTRERDVMSRLD 95
Query: 64 HPYIVEFKEAWVE-KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF--AQLLLA 120
HP+ V+ + + + Y + Y + G++ + ++K G++ ++ C F A+++ A
Sbjct: 96 HPFFVKLYFCFQDDEKLYFGL--SYAKNGELLKYIRKI-GSF---DETCTRFYTAEIVSA 149
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPE 177
++YLH ++HRDLK NI L +D +++ DFG AK L + A+ VGT Y+ PE
Sbjct: 150 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
LL + SD+W+LGC +Y++ A P F+A + + KI + P + P +
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARD 268
Query: 238 LIKGMLRKNPEHRPSASE------LLKHPFLQ 263
L++ +L + R E L HPF +
Sbjct: 269 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 300
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 15/271 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYV-LKKIRLARQTERCRRSAHQEMALIARVQH 64
D + +GRG FG +A K Y K + + + + A E ++A+V
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKK--SNGAYFPEEKLCKWFAQLLLAVD 122
+IV A+ E +C+V GGD+ + + F E + + AQ++ ++
Sbjct: 245 RFIVSLAYAF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS-SVVGTPNYMCPELLAD 181
+LH +++RDLK N+ L D +VR+ D GLA LKA + GTP +M PELL
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKA----FDMAGLISKINRSSIGPLPSCYSPSLKT 237
Y F D ++LG +YEM A R F+A + L ++ ++ P +SP+ K
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV-TYPDKFSPASKD 422
Query: 238 LIKGMLRKNPEHR-----PSASELLKHPFLQ 263
+ +L+K+PE R S L HP +
Sbjct: 423 FCEALLQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 63
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 64 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 119
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ DFG + + +++ GT +Y+ PE++
Sbjct: 120 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIE 178
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 179 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLIS 237
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 238 RLLKHNPSQRPMLREVLEHPWI 259
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 129/291 (44%), Gaps = 35/291 (12%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYV-LKKIRLARQTERCRRSAHQEMALIARVQ-- 63
QYE + +IG GA+G ++V LK++R+ E S +E+A++ ++
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 64 -HPYIVEFKEAWV----EKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
HP +V + ++ + +V + + D+ + K P E + QLL
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPEL 178
+D+LHS+ V+HRDLK NI +T ++L DFGLA+ +SVV T Y PE+
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 179 LADIPYGFKSDIWSLGCCMYEMAAHRPAF----------KAFDMAGLISKIN--RSSIGP 226
L Y D+WS+GC EM +P F K D+ GL + + R P
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 250
Query: 227 LPSCYSPSL--------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
+ +S S K L+ L NP R SA L HP+ Q
Sbjct: 251 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 127/264 (48%), Gaps = 10/264 (3%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
+ Y+ ++++G GA+G +L + + +K IR + +E+A++ + HP
Sbjct: 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHP 96
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
I++ + + +K Y ++ Y G E++ + F E Q+L V YLH
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK---FNEVDAAVIIKQVLSGVTYLH 153
Query: 126 SNYVLHRDLKCSNIFL---TKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
+ ++HRDLK N+ L KD +++ DFGL+ + +GT Y+ PE+L
Sbjct: 154 KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK- 212
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSLKTLI 239
Y K D+WS+G ++ + A P F ++ K+ + P S K LI
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLI 272
Query: 240 KGMLRKNPEHRPSASELLKHPFLQ 263
K ML+ + + R SA + L+HP+++
Sbjct: 273 KQMLQFDSQRRISAQQALEHPWIK 296
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 129/291 (44%), Gaps = 35/291 (12%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYV-LKKIRLARQTERCRRSAHQEMALIARVQ-- 63
QYE + +IG GA+G ++V LK++R+ E S +E+A++ ++
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 64 -HPYIVEFKEAWV----EKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
HP +V + ++ + +V + + D+ + K P E + QLL
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPEL 178
+D+LHS+ V+HRDLK NI +T ++L DFGLA+ +SVV T Y PE+
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 179 LADIPYGFKSDIWSLGCCMYEMAAHRPAF----------KAFDMAGLISKIN--RSSIGP 226
L Y D+WS+GC EM +P F K D+ GL + + R P
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 250
Query: 227 LPSCYSPSL--------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
+ +S S K L+ L NP R SA L HP+ Q
Sbjct: 251 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 68
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 69 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 124
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ DFG + + +++ GT +Y+ PE++
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIE 183
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLIS 242
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 243 RLLKHNPSQRPMLREVLEHPWI 264
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 123/265 (46%), Gaps = 14/265 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D+YE+++ IG G FG A L+ +K+ L ++ + E+ + +E+ ++HP
Sbjct: 18 DRYELVKDIGSGNFGVARLMR---DKQSNELVAVKYIERGEKIDENVKREIINHRSLRHP 74
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
IV FKE + ++ IV Y GG++ E + N F E++ +F QL+ V Y H
Sbjct: 75 NIVRFKEV-ILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCH 131
Query: 126 SNYVLHRDLKCSNIFLTKDQDVRLG--DFGLAKTLKADDLASSVVGTPNYMCPELLADIP 183
+ V HRDLK N L RL DFG +K+ S VGTP Y+ PE+L
Sbjct: 132 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 191
Query: 184 Y-GFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKI-NRSSIGPLPSCYSPSLKT 237
Y G +D+WS G +Y M F + + I +I N P SP +
Sbjct: 192 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 251
Query: 238 LIKGMLRKNPEHRPSASELLKHPFL 262
LI + +P R S E+ H +
Sbjct: 252 LISRIFVADPAKRISIPEIRNHEWF 276
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 6/205 (2%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
ME + D +E + ++G G G V+H+ K I L + R +E+ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA-IRNQIIRELQVLH 59
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
PYIV F A+ G + I + +GG + +++KK+ PE+ L K ++
Sbjct: 60 ECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKG 116
Query: 121 VDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ YL + ++HRD+K SNI + +++L DFG++ L D +A+S VGT +YM PE L
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERL 175
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHR 204
Y +SDIWS+G + EMA R
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 131/269 (48%), Gaps = 19/269 (7%)
Query: 5 MDQYEIMEQ-IGRGAFGAAILVNHRAEKKKYVLKKI--RLARQTERCRRSAHQEMALIAR 61
++QY +E IGRG++G + + + + KKI +R + QE+ ++
Sbjct: 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK----QEIEIMKS 62
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
+ HP I+ E + E + +V C GG++ E + + F E + +L AV
Sbjct: 63 LDHPNIIRLYETF-EDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSAV 119
Query: 122 DYLHSNYVLHRDLKCSN-IFLTKDQD--VRLGDFGLAKTLKADDLASSVVGTPNYMCPEL 178
Y H V HRDLK N +FLT D ++L DFGLA K + + VGTP Y+ P++
Sbjct: 120 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV 179
Query: 179 LADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPS----CYSPS 234
L + YG + D WS G MY + P F A ++ KI R P SP
Sbjct: 180 LEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI-REGTFTFPEKDWLNVSPQ 237
Query: 235 LKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
++LI+ +L K+P+ R ++ + L+H + +
Sbjct: 238 AESLIRRLLTKSPKQRITSLQALEHEWFE 266
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R + K++L K+ Q E+ +E+ + +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLA--REKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 65 LRHPNILRLY-GYFHDSTRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ DFG + + A ++ GT +Y+ PE++
Sbjct: 121 LSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMIE 179
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEF-TFPDFVTEGARDLIS 238
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWI 260
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 6/205 (2%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
ME + D +E + ++G G G V+H+ K I L + R +E+ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA-IRNQIIRELQVLH 59
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
PYIV F A+ G + I + +GG + +++KK+ PE+ L K ++
Sbjct: 60 ECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKG 116
Query: 121 VDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ YL + ++HRD+K SNI + +++L DFG++ L D +A+S VGT +YM PE L
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERL 175
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHR 204
Y +SDIWS+G + EMA R
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 8/286 (2%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ Y +++ IG+G F L H ++ +K I + + +E+ ++ + H
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 70
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ E +E + ++ Y GG++ + + ++G +E K F Q++ AV Y
Sbjct: 71 PNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLV-AHGRMKEKEARSK-FRQIVSAVQYC 127
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY 184
H ++HRDLK N+ L D ++++ DFG + + G+P Y PEL Y
Sbjct: 128 HQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKY 187
Query: 185 -GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGML 243
G + D+WSLG +Y + + F ++ L ++ R +P S + L+K L
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKRFL 246
Query: 244 RKNPEHRPSASELLKHPFLQ--HFVDQYRPTFPPAA-CSPEKPISI 286
NP R + +++K ++ H D+ +P P S +K I I
Sbjct: 247 VLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRIDI 292
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 127/256 (49%), Gaps = 14/256 (5%)
Query: 10 IMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQHPYI 67
I E+IG G+FG HRAE + L Q R +E+A++ R++HP I
Sbjct: 41 IKEKIGAGSFGTV----HRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNG-AYFPEEKLCKWFAQLLLAVDYLHS 126
V F A V + + IVT Y G + L+ KS E + + ++YLH+
Sbjct: 97 VLFMGA-VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 127 NY--VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASS--VVGTPNYMCPELLADI 182
++HR+LK N+ + K V++ DFGL++ LKA SS GTP +M PE+L D
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR-LKASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKIN-RSSIGPLPSCYSPSLKTLIKG 241
P KSD++S G ++E+A + + + A +++ + + +P +P + +I+G
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEG 274
Query: 242 MLRKNPEHRPSASELL 257
P RPS + ++
Sbjct: 275 CWTNEPWKRPSFATIM 290
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 15/271 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYV-LKKIRLARQTERCRRSAHQEMALIARVQH 64
D + +GRG FG +A K Y K + + + + A E ++A+V
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKK--SNGAYFPEEKLCKWFAQLLLAVD 122
+IV A+ E +C+V GGD+ + + F E + + AQ++ ++
Sbjct: 245 RFIVSLAYAF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS-SVVGTPNYMCPELLAD 181
+LH +++RDLK N+ L D +VR+ D GLA LKA + GTP +M PELL
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG 363
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKA----FDMAGLISKINRSSIGPLPSCYSPSLKT 237
Y F D ++LG +YEM A R F+A + L ++ ++ P +SP+ K
Sbjct: 364 EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV-TYPDKFSPASKD 422
Query: 238 LIKGMLRKNPEHR-----PSASELLKHPFLQ 263
+ +L+K+PE R S L HP +
Sbjct: 423 FCEALLQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 132/271 (48%), Gaps = 17/271 (6%)
Query: 1 MESR-----MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSA 52
MES+ ++ +EI +G+G FG L R ++ K++L K+ Q E+
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 53 HQEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLC 111
+E+ + + ++HP I+ + V ++ Y G + EL K S F E++
Sbjct: 59 RREVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTA 114
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP 171
+ +L A+ Y HS V+HRD+K N+ L ++++ DFG + + +++ GT
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTL 173
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY 231
+Y+ PE++ + K D+WSLG YE +P F+A +I+R P
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFV 232
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
+ + LI +L+ NP RP E+L+HP++
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 66
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 67 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 122
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ DFG + + + GT +Y+ PE++
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIE 181
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 182 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLIS 240
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 241 RLLKHNPSQRPMLREVLEHPWI 262
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 128/265 (48%), Gaps = 18/265 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 65 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGL---AKTLKADDLASSVVGTPNYMCPE 177
+ Y HS V+HRD+K N+ L ++++ DFG A + + DL GT +Y+ PE
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE 176
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
++ + K D+WSLG YE +P F+A +I+R P + +
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARD 235
Query: 238 LIKGMLRKNPEHRPSASELLKHPFL 262
LI +L+ NP RP E+L+HP++
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 66
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 67 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 122
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ +FG + + +++ GT +Y+ PE++
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-RTTLCGTLDYLPPEMIE 181
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 182 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLIS 240
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 241 RLLKHNPSQRPMLREVLEHPWI 262
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 127/266 (47%), Gaps = 9/266 (3%)
Query: 3 SRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV 62
S D Y+I+E++G GAFG +A + +V K I ++ + E++++ ++
Sbjct: 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQL 105
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
HP ++ +A+ +K V I+ + GG++ + + + E ++ + Q +
Sbjct: 106 HHPKLINLHDAFEDKYEMVLILE-FLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLK 163
Query: 123 YLHSNYVLHRDLKCSNIF--LTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
++H + ++H D+K NI K V++ DFGLA L D++ T + PE++
Sbjct: 164 HMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVD 223
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSLKT 237
P GF +D+W++G Y + + F D + + R S SP K
Sbjct: 224 REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283
Query: 238 LIKGMLRKNPEHRPSASELLKHPFLQ 263
IK +L+K P R + + L+HP+L+
Sbjct: 284 FIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 86
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 142
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 322 D---PSDEPIAEAPFK 334
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 102 bits (254), Expect = 1e-21, Method: Composition-based stats.
Identities = 82/276 (29%), Positives = 132/276 (47%), Gaps = 26/276 (9%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR 61
+ R +++I +IGRG+F + +++ + T+ R+ +E +
Sbjct: 24 DGRFLKFDI--EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKG 81
Query: 62 VQHPYIVEFKEAWVE----KGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK---LCKWF 114
+QHP IV F ++W K C V +VT G + +K+ F K L W
Sbjct: 82 LQHPNIVRFYDSWESTVKGKKCIV-LVTELXTSGTLKTYLKR-----FKVXKIKVLRSWC 135
Query: 115 AQLLLAVDYLHSNY--VLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLASSVVGTP 171
Q+L + +LH+ ++HRDLKC NIF+T V++GD GLA TLK A +V+GTP
Sbjct: 136 RQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA-TLKRASFAKAVIGTP 194
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY 231
+ PE + Y D+++ G C E A + A I + R + G P+ +
Sbjct: 195 EFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYR--RVTSGVKPASF 251
Query: 232 S----PSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
P +K +I+G +R+N + R S +LL H F Q
Sbjct: 252 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 287
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 131/269 (48%), Gaps = 19/269 (7%)
Query: 5 MDQYEIMEQ-IGRGAFGAAILVNHRAEKKKYVLKKI--RLARQTERCRRSAHQEMALIAR 61
++QY +E IGRG++G + + + + KKI +R + QE+ ++
Sbjct: 24 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK----QEIEIMKS 79
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
+ HP I+ E + E + +V C GG++ E + + F E + +L AV
Sbjct: 80 LDHPNIIRLYETF-EDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSAV 136
Query: 122 DYLHSNYVLHRDLKCSN-IFLTKDQD--VRLGDFGLAKTLKADDLASSVVGTPNYMCPEL 178
Y H V HRDLK N +FLT D ++L DFGLA K + + VGTP Y+ P++
Sbjct: 137 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV 196
Query: 179 LADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPS----CYSPS 234
L + YG + D WS G MY + P F A ++ KI R P SP
Sbjct: 197 LEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI-REGTFTFPEKDWLNVSPQ 254
Query: 235 LKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
++LI+ +L K+P+ R ++ + L+H + +
Sbjct: 255 AESLIRRLLTKSPKQRITSLQALEHEWFE 283
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 129/264 (48%), Gaps = 18/264 (6%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCR------RSAHQEMALIA 60
+Y M +G GAFG + + K+ V+K I+ + E C E+A+++
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW-FAQLLL 119
RV+H I++ + + +G + ++ + G D+ + + +E L + F QL+
Sbjct: 85 RVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRL---DEPLASYIFRQLVS 141
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
AV YL ++HRD+K NI + +D ++L DFG A L+ L + GT Y PE+L
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVL 201
Query: 180 ADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTL 238
PY G + ++WSLG +Y + F + + ++I P P S L +L
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLVFEENPFCELE------ETVEAAIHP-PYLVSKELMSL 254
Query: 239 IKGMLRKNPEHRPSASELLKHPFL 262
+ G+L+ PE R + +L+ P++
Sbjct: 255 VSGLLQPVPERRTTLEKLVTDPWV 278
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 90
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 146
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 147 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 206
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 207 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 266
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 267 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 325
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 326 D---PSDEPIAEAPFK 338
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 82
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 138
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 258
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 318 D---PSDEPIAEAPFK 330
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 126/256 (49%), Gaps = 14/256 (5%)
Query: 10 IMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH--QEMALIARVQHPYI 67
I E+IG G+FG HRAE + L Q R +E+A++ R++HP I
Sbjct: 41 IKEKIGAGSFGTV----HRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNG-AYFPEEKLCKWFAQLLLAVDYLHS 126
V F A V + + IVT Y G + L+ KS E + + ++YLH+
Sbjct: 97 VLFMGA-VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 127 NY--VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASS--VVGTPNYMCPELLADI 182
++HRDLK N+ + K V++ DFGL++ LKA S GTP +M PE+L D
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKIN-RSSIGPLPSCYSPSLKTLIKG 241
P KSD++S G ++E+A + + + A +++ + + +P +P + +I+G
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEG 274
Query: 242 MLRKNPEHRPSASELL 257
P RPS + ++
Sbjct: 275 CWTNEPWKRPSFATIM 290
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 102 bits (253), Expect = 2e-21, Method: Composition-based stats.
Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDM-AELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 70 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 125
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ DFG + +++ GT +Y+ PE +
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXIE 184
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 185 GRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLIS 243
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 244 RLLKHNPSQRPXLREVLEHPWI 265
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 65 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ DFG + + + + GT +Y+ PE++
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTXLCGTLDYLPPEMIE 179
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLIS 238
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWI 260
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 133/303 (43%), Gaps = 44/303 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D+YEI+E IG GA+G R ++ +KKI A + +E+ ++ +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 66 YIVEFKEAW---VEKGCY--VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
I+ K+ V G + V +V E D+ +++ S E + + QLL
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTL--EHVRYFLYQLLRG 171
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTL-----KADDLASSVVGTPNYMC 175
+ Y+HS V+HRDLK SN+ + ++ ++++GDFG+A+ L + + V T Y
Sbjct: 172 LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 231
Query: 176 PELLADI-PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPS----- 229
PEL+ + Y D+WS+GC EM A R F + + I P P+
Sbjct: 232 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 291
Query: 230 ------CYSPSLK-------------------TLIKGMLRKNPEHRPSASELLKHPFLQH 264
Y SL +L+ MLR P R SA+ L+HPFL
Sbjct: 292 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 351
Query: 265 FVD 267
+ D
Sbjct: 352 YHD 354
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 84
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 140
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 260
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 261 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 319
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 320 D---PSDEPIAEAPFK 332
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 6/204 (2%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR 61
E + D +E + ++G G G V HR K I L + R +E+ ++
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPA-IRNQIIRELQVLHE 70
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
PYIV F A+ G + I + +GG + +++K++ PEE L K +L +
Sbjct: 71 CNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGL 127
Query: 122 DYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
YL + ++HRD+K SNI + +++L DFG++ L D +A+S VGT +YM PE L
Sbjct: 128 AYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMAPERLQ 186
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHR 204
Y +SDIWS+G + E+A R
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 102
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 158
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 159 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 278
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 279 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 337
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 338 D---PSDEPIAEAPFK 350
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 132/271 (48%), Gaps = 17/271 (6%)
Query: 1 MESR-----MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSA 52
MES+ ++ +EI +G+G FG L R ++ K++L K+ Q E+
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 53 HQEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLC 111
+E+ + + ++HP I+ + V ++ Y G + EL K S F E++
Sbjct: 59 RREVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTA 114
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP 171
+ +L A+ Y HS V+HRD+K N+ L ++++ +FG + + +++ GT
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-RTTLCGTL 173
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY 231
+Y+ PE++ + K D+WSLG YE +P F+A +I+R P
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFV 232
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
+ + LI +L+ NP RP E+L+HP++
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 11/270 (4%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH-QEMALIARVQH 64
D+Y+ ++++G GA+G +L + + +K I+ + T A E+A++ ++ H
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P I++ E + +K Y ++ Y G E++ + F E Q+L YL
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK---FSEVDAAVIMKQVLSGTTYL 120
Query: 125 HSNYVLHRDLKCSNIFL---TKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLAD 181
H + ++HRDLK N+ L ++D +++ DFGL+ + +GT Y+ PE+L
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 180
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIG---PLPSCYSPSLKTL 238
Y K D+WS G +Y + P F ++ ++ + P + S K L
Sbjct: 181 -KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQL 239
Query: 239 IKGMLRKNPEHRPSASELLKHPFLQHFVDQ 268
+K ML P R SA E L HP++ F Q
Sbjct: 240 VKLMLTYEPSKRISAEEALNHPWIVKFCSQ 269
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 82
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 138
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 258
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 318 D---PSDEPIAEAPFK 330
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 124/271 (45%), Gaps = 23/271 (8%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRS-AHQEMALIARVQHP 65
QY ++ G+G FG RA K Y KK+ R +R + A E ++ +V
Sbjct: 188 QYRVL---GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR 244
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
++V A+ K +C+V GGD+ + A FPE + + A++ ++ LH
Sbjct: 245 FVVSLAYAYETKDA-LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 126 SNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYG 185
+++RDLK NI L +R+ D GLA + VGT YM PE++ + Y
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYT 363
Query: 186 FKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL----PSCY----SPSLKT 237
F D W+LGC +YEM A + F+ KI R + L P Y SP ++
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPFQQRK-----KKIKREEVERLVKEVPEEYSERFSPQARS 418
Query: 238 LIKGMLRKNPEHR-----PSASELLKHPFLQ 263
L +L K+P R SA E+ +HP +
Sbjct: 419 LCSQLLCKDPAERLGCRGGSAREVKEHPLFK 449
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 6/205 (2%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
ME + D +E + ++G G G V+H+ K I L + R +E+ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA-IRNQIIRELQVLH 59
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
PYIV F A+ G + I + +GG + +++KK+ PE+ L K ++
Sbjct: 60 ECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKG 116
Query: 121 VDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ YL + ++HRD+K SNI + +++L DFG++ L D +A+S VGT +YM PE L
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERL 175
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHR 204
Y +SDIWS+G + EMA R
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 6/205 (2%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
ME + D +E + ++G G G V+H+ K I L + R +E+ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA-IRNQIIRELQVLH 59
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
PYIV F A+ G + I + +GG + +++KK+ PE+ L K ++
Sbjct: 60 ECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKG 116
Query: 121 VDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ YL + ++HRD+K SNI + +++L DFG++ L D +A+S VGT +YM PE L
Sbjct: 117 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERL 175
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHR 204
Y +SDIWS+G + EMA R
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 133/303 (43%), Gaps = 44/303 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D+YEI+E IG GA+G R ++ +KKI A + +E+ ++ +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 66 YIVEFKEAW---VEKGCY--VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
I+ K+ V G + V +V E D+ +++ S E + + QLL
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTL--EHVRYFLYQLLRG 170
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTL-----KADDLASSVVGTPNYMC 175
+ Y+HS V+HRDLK SN+ + ++ ++++GDFG+A+ L + + V T Y
Sbjct: 171 LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 230
Query: 176 PELLADI-PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPS----- 229
PEL+ + Y D+WS+GC EM A R F + + I P P+
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 290
Query: 230 ------CYSPSL-------------------KTLIKGMLRKNPEHRPSASELLKHPFLQH 264
Y SL +L+ MLR P R SA+ L+HPFL
Sbjct: 291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350
Query: 265 FVD 267
+ D
Sbjct: 351 YHD 353
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 10/287 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ Y +++ IG+G F L H ++ +K I + + +E+ ++ + H
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 65 PYIVEFKEAW-VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDY 123
P IV+ E EK Y ++ Y GG++ + + ++G +E K F Q++ AV Y
Sbjct: 74 PNIVKLFEVIETEKTLY--LIMEYASGGEVFDYLV-AHGRMKEKEARSK-FRQIVSAVQY 129
Query: 124 LHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIP 183
H ++HRDLK N+ L D ++++ DFG + + G P Y PEL
Sbjct: 130 CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKK 189
Query: 184 Y-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGM 242
Y G + D+WSLG +Y + + F ++ L ++ R +P S + L+K
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKRF 248
Query: 243 LRKNPEHRPSASELLKHPFLQ--HFVDQYRPTFPPAA-CSPEKPISI 286
L NP R + +++K ++ H D+ +P P S +K I I
Sbjct: 249 LVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRIDI 295
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 87
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 143
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 144 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 203
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 263
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 264 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 322
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 323 D---PSDEPIAEAPFK 335
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 88
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 144
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 145 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 204
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 205 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 264
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 265 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 323
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 324 D---PSDEPIAEAPFK 336
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 79
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 135
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 136 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 195
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 196 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 255
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 256 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 314
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 315 D---PSDEPIAEAPFK 327
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 86
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 142
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 322 D---PSDEPIAEAPFK 334
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 80
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 136
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 137 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINL 256
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 257 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 315
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 316 D---PSDEPIAEAPFK 328
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 80
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 136
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 137 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 256
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 257 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 315
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 316 D---PSDEPIAEAPFK 328
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 131/275 (47%), Gaps = 27/275 (9%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKY---VLKK-IRLARQTERCRRSAHQEMALIA 60
+D +E + +G+G+FG +L + Y VLKK + L C + + ++L A
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL-A 80
Query: 61 RVQHPYIVEFKEAWVEKGCY-----VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFA 115
R HP++ + C+ + V + GGD+ ++KS F E + + A
Sbjct: 81 R-NHPFLTQLF------CCFQTPDRLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAA 131
Query: 116 QLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVV-GTPNYM 174
+++ A+ +LH +++RDLK N+ L + +L DFG+ K + + ++ GTP+Y+
Sbjct: 132 EIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYI 191
Query: 175 CPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPS 234
PE+L ++ YG D W++G +YEM F+A + L I + P+
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV-VYPTWLHED 250
Query: 235 LKTLIKGMLRKNPEHRPSA------SELLKHPFLQ 263
++K + KNP R + +L+HPF +
Sbjct: 251 ATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFK 285
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 12/262 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ +EI +G+G FG L R ++ K++L K+ Q E+ +E+ + +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 65 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L ++++ DFG + + + GT +Y+ PE++
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIE 179
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE +P F+A +I+R P + + LI
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFVTEGARDLIS 238
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L+ NP RP E+L+HP++
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWI 260
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKI-RLARQTERCRRSAHQEMALIARVQH 64
D+Y+ ++ IG G FG A L+ + K+ +K I R A E +R +L +H
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL----RH 75
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV FKE + ++ I+ Y GG++ E + N F E++ +F QLL V Y
Sbjct: 76 PNIVRFKEV-ILTPTHLAIIMEYASGGELYE--RICNAGRFSEDEARFFFQQLLSGVSYC 132
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLG--DFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
HS + HRDLK N L RL DFG +K+ S VGTP Y+ PE+L
Sbjct: 133 HSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQ 192
Query: 183 PY-GFKSDIWSLGCCMYEM 200
Y G +D+WS G +Y M
Sbjct: 193 EYDGKIADVWSCGVTLYVM 211
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 124/271 (45%), Gaps = 23/271 (8%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRS-AHQEMALIARVQHP 65
QY ++ G+G FG RA K Y KK+ R +R + A E ++ +V
Sbjct: 188 QYRVL---GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR 244
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
++V A+ K +C+V GGD+ + A FPE + + A++ ++ LH
Sbjct: 245 FVVSLAYAYETKDA-LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 126 SNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYG 185
+++RDLK NI L +R+ D GLA + VGT YM PE++ + Y
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYT 363
Query: 186 FKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL----PSCY----SPSLKT 237
F D W+LGC +YEM A + F+ KI R + L P Y SP ++
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPFQQRK-----KKIKREEVERLVKEVPEEYSERFSPQARS 418
Query: 238 LIKGMLRKNPEHR-----PSASELLKHPFLQ 263
L +L K+P R SA E+ +HP +
Sbjct: 419 LCSQLLCKDPAERLGCRGGSAREVKEHPLFK 449
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 122/265 (46%), Gaps = 14/265 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D+YE+++ IG G FG A L+ +K+ L ++ + E+ + +E+ ++HP
Sbjct: 19 DRYELVKDIGSGNFGVARLMR---DKQSNELVAVKYIERGEKIDENVKREIINHRSLRHP 75
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
IV FKE + ++ IV Y GG++ E + N F E++ +F QL+ V Y H
Sbjct: 76 NIVRFKEV-ILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 126 SNYVLHRDLKCSNIFLTKDQDVRLG--DFGLAKTLKADDLASSVVGTPNYMCPELLADIP 183
+ V HRDLK N L RL FG +K+ S VGTP Y+ PE+L
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 184 Y-GFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKI-NRSSIGPLPSCYSPSLKT 237
Y G +D+WS G +Y M F + + I +I N P SP +
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 238 LIKGMLRKNPEHRPSASELLKHPFL 262
LI + +P R S E+ H +
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 6/204 (2%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR 61
E + D +E + ++G G G V+H+ K I L + R +E+ ++
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA-IRNQIIRELQVLHE 87
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
PYIV F A+ G + I + +GG + +++KK+ PE+ L K ++ +
Sbjct: 88 CNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 144
Query: 122 DYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
YL + ++HRD+K SNI + +++L DFG++ L D +A+S VGT +YM PE L
Sbjct: 145 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQ 203
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHR 204
Y +SDIWS+G + EMA R
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 17/271 (6%)
Query: 1 MESR-----MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSA 52
MES+ ++ +EI +G+G FG L R ++ K++L K+ Q E+
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 53 HQEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLC 111
+E+ + + ++HP I+ + V ++ Y G + EL K S F E++
Sbjct: 59 RREVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTA 114
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP 171
+ +L A+ Y HS V+HRD+K N+ L ++++ DFG + + + GT
Sbjct: 115 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RXXLCGTL 173
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY 231
+Y+ PE++ + K D+WSLG YE +P F+A +I+R P
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-TFPDFV 232
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
+ + LI +L+ NP RP E+L+HP++
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 133/292 (45%), Gaps = 37/292 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M++YE + +IG G++G +R + +KK + ++ A +E+ ++ +++H
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P +V E + K + +V YC+ + EL + G PE + Q L AV++
Sbjct: 62 PNLVNLLEVFRRKR-RLHLVFEYCDHTVLHELDRYQRGV--PEHLVKSITWQTLQAVNFC 118
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA-DDLASSVVGTPNYMCPELL-ADI 182
H + +HRD+K NI +TK ++L DFG A+ L D V T Y PELL D
Sbjct: 119 HKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKA---FDMAGLISK--------------INRSSIG 225
YG D+W++GC E+ + P + D LI K N+ G
Sbjct: 179 QYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238
Query: 226 ----------PL----PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
PL P+ P+L L+KG L +P R + +LL HP+ +
Sbjct: 239 VKIPDPEDMEPLELKFPNISYPAL-GLLKGCLHMDPTERLTCEQLLHHPYFE 289
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 142/316 (44%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 86
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 142
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D V T Y PE+
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 202
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 322 D---PSDEPIAEAPFK 334
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 142/316 (44%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 87
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 143
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D V T Y PE+
Sbjct: 144 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 203
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 263
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 264 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 322
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 323 D---PSDEPIAEAPFK 335
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ R +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHEN 86
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLK---CQHLSNDHICYFLYQILRGLK 142
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 322 D---PSDEPIAEAPFK 334
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 128/283 (45%), Gaps = 35/283 (12%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
ME + D E + ++GRGA+G + H + +K+IR ++ +R +
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61
Query: 61 RVQHPYIVEFKEAWVEKG-CYVCIVTGYCEGGDMAELMKKS----------NGAYFPEEK 109
V P+ V F A +G ++C+ ELM S G PE+
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICM-----------ELMDTSLDKFYKQVIDKGQTIPEDI 110
Query: 110 LCKWFAQLLLAVDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV- 167
L K ++ A+++LHS V+HRD+K SN+ + V++ DFG++ L DD+A +
Sbjct: 111 LGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL-VDDVAKDID 169
Query: 168 VGTPNYMCPEL----LADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSS 223
G YM PE L Y KSDIWSLG M E+A R + ++ ++ +
Sbjct: 170 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP--FQQLKQVV 227
Query: 224 IGPLPSC----YSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
P P +S L+KN + RP+ EL++HPF
Sbjct: 228 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 143/316 (45%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + ++KI C+R+ +E+ ++ R +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTL-REIKILLRFRHEN 86
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 142
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 322 D---PSDEPIAEAPFK 334
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 100 bits (248), Expect = 6e-21, Method: Composition-based stats.
Identities = 68/269 (25%), Positives = 129/269 (47%), Gaps = 14/269 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTER----CRRSAHQEMALIAR 61
D YE+ E++G G F + K+Y K I+ R + R +E+ ++
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
++HP I+ + + E V ++ GG++ + + + E++ ++ Q+L V
Sbjct: 65 IRHPNIITLHDIF-ENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGV 121
Query: 122 DYLHSNYVLHRDLKCSNIFL----TKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPE 177
YLHS + H DLK NI L + ++L DFG+A ++A + ++ GTP ++ PE
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAF---KAFDMAGLISKINRSSIGPLPSCYSPS 234
++ P G ++D+WS+G Y + + F + IS +N S S
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241
Query: 235 LKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
K I+ +L K+P+ R + ++ L+H +++
Sbjct: 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 11/270 (4%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAH-QEMALIARVQH 64
D+Y+ ++++G GA+G +L + + +K I+ + T A E+A++ ++ H
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P I++ E + +K Y ++ Y G E++ + F E Q+L YL
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK---FSEVDAAVIMKQVLSGTTYL 137
Query: 125 HSNYVLHRDLKCSNIFL---TKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLAD 181
H + ++HRDLK N+ L ++D +++ DFGL+ + +GT Y+ PE+L
Sbjct: 138 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 197
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIG---PLPSCYSPSLKTL 238
Y K D+WS G +Y + P F ++ ++ + P + S K L
Sbjct: 198 -KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQL 256
Query: 239 IKGMLRKNPEHRPSASELLKHPFLQHFVDQ 268
+K ML P R SA E L HP++ F Q
Sbjct: 257 VKLMLTYEPSKRISAEEALNHPWIVKFCSQ 286
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 99.8 bits (247), Expect = 8e-21, Method: Composition-based stats.
Identities = 69/273 (25%), Positives = 129/273 (47%), Gaps = 14/273 (5%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTER----CRRSAHQEMA 57
E D YE+ E++G G F + K+Y K I+ R + R +E+
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 58 LIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
++ ++HP I+ + + E V ++ GG++ + + + E++ ++ Q+
Sbjct: 68 ILREIRHPNIITLHDIF-ENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQI 124
Query: 118 LLAVDYLHSNYVLHRDLKCSNIFL----TKDQDVRLGDFGLAKTLKADDLASSVVGTPNY 173
L V YLHS + H DLK NI L + ++L DFG+A ++A + ++ GTP +
Sbjct: 125 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEF 184
Query: 174 MCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAF---KAFDMAGLISKINRSSIGPLPSC 230
+ PE++ P G ++D+WS+G Y + + F + IS +N S
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSN 244
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S K I+ +L K+P+ R ++ L+H +++
Sbjct: 245 TSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 127/266 (47%), Gaps = 14/266 (5%)
Query: 4 RMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-----KIRLARQTERCRRSAHQEMAL 58
++ Y + + +G G FG + H+ K +K KIR + +R E+
Sbjct: 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKR----EIQN 64
Query: 59 IARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
+ +HP+I++ + + +V Y GG++ + + K E + + F Q+L
Sbjct: 65 LKLFRHPHIIKLYQV-ISTPTDFFMVMEYVSGGELFDYICKHGRV--EEMEARRLFQQIL 121
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPEL 178
AVDY H + V+HRDLK N+ L + ++ DFGL+ + + + G+PNY PE+
Sbjct: 122 SAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEV 181
Query: 179 LADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
++ Y G + DIWS G +Y + F + L KI R + +P + S+ T
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPEYLNRSVAT 240
Query: 238 LIKGMLRKNPEHRPSASELLKHPFLQ 263
L+ ML+ +P R + ++ +H + +
Sbjct: 241 LLMHMLQVDPLKRATIKDIREHEWFK 266
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 134/277 (48%), Gaps = 21/277 (7%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEK---KKYVLKKIRLARQTERCRRSAHQ--EMALI 59
++ +E+++ +G GA+G LV + K Y +K ++ A ++ + + H E ++
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
+ Q P++V A+ + + ++ Y GG++ S F E ++ + +++
Sbjct: 113 EHIRQSPFLVTLHYAF-QTETKLHLILDYINGGEL--FTHLSQRERFTEHEVQIYVGEIV 169
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL--ASSVVGTPNYMCP 176
LA+++LH +++RD+K NI L + V L DFGL+K AD+ A GT YM P
Sbjct: 170 LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 177 ELL--ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIG---PLPSCY 231
+++ D + D WSLG MYE+ F ++I+R + P P
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEM 289
Query: 232 SPSLKTLIKGMLRKNPEHRPS-----ASELLKHPFLQ 263
S K LI+ +L K+P+ R A E+ +H F Q
Sbjct: 290 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ 326
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 136/329 (41%), Gaps = 75/329 (22%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
+E ++ +GRG FG ++ + Y +K+IRL + E R +E+ +A+++HP I
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPGI 66
Query: 68 V----------------EFKEAWVEK---------------------------------- 77
V E E W++
Sbjct: 67 VRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQ 126
Query: 78 ------GCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLC-KWFAQLLLAVDYLHSNYVL 130
Y+ I C ++ + M + E +C F Q+ AV++LHS ++
Sbjct: 127 LQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLM 186
Query: 131 HRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV-------------VGTPNYMCPE 177
HRDLK SNIF T D V++GDFGL + D+ +V VGT YM PE
Sbjct: 187 HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPE 246
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA-FDMAGLISKINRSSIGPLPSCYSPSLK 236
+ Y K DI+SLG ++E+ +F + +I+ + L + P
Sbjct: 247 QIHGNNYSHKVDIFSLGLILFELLY---SFSTQMERVRIITDVRNLKFPLLFTQKYPQEH 303
Query: 237 TLIKGMLRKNPEHRPSASELLKHPFLQHF 265
+++ ML +P RP A++++++ ++
Sbjct: 304 MMVQDMLSPSPTERPEATDIIENAIFENL 332
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 121/265 (45%), Gaps = 14/265 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
D+YE+++ IG G FG A L+ +K+ L ++ + E+ + +E+ ++HP
Sbjct: 19 DRYELVKDIGSGNFGVARLMR---DKQSNELVAVKYIERGEKIDENVKREIINHRSLRHP 75
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
IV FKE + ++ IV Y GG++ E + N F E++ +F QL+ V Y H
Sbjct: 76 NIVRFKEV-ILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 126 SNYVLHRDLKCSNIFLTKDQDVRLG--DFGLAKTLKADDLASSVVGTPNYMCPELLADIP 183
+ V HRDLK N L RL FG +K+ VGTP Y+ PE+L
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKE 192
Query: 184 Y-GFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKI-NRSSIGPLPSCYSPSLKT 237
Y G +D+WS G +Y M F + + I +I N P SP +
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 238 LIKGMLRKNPEHRPSASELLKHPFL 262
LI + +P R S E+ H +
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 99.4 bits (246), Expect = 1e-20, Method: Composition-based stats.
Identities = 68/269 (25%), Positives = 127/269 (47%), Gaps = 14/269 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTER----CRRSAHQEMALIAR 61
D YE+ E++G G F + K+Y K I+ R R +E+ ++
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
++HP I+ + + E V ++ GG++ + + + E++ ++ Q+L V
Sbjct: 86 IRHPNIITLHDIF-ENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGV 142
Query: 122 DYLHSNYVLHRDLKCSNIFL----TKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPE 177
YLHS + H DLK NI L + ++L DFG+A ++A + ++ GTP ++ PE
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 202
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAF---KAFDMAGLISKINRSSIGPLPSCYSPS 234
++ P G ++D+WS+G Y + + F + IS +N S S
Sbjct: 203 IVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 262
Query: 235 LKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
K I+ +L K+P+ R ++ L+H +++
Sbjct: 263 AKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 127/293 (43%), Gaps = 37/293 (12%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRR---SAHQEMALIARVQ 63
+YE + +IG GA+G LK +R+ S +E+AL+ R++
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 64 ---HPYIVEFKEAWV----EKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQ 116
HP +V + ++ V +V + + D+ + K+ P E + Q
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 128
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCP 176
L +D+LH+N ++HRDLK NI +T V+L DFGLA+ + VV T Y P
Sbjct: 129 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAP 188
Query: 177 ELLADIPYGFKSDIWSLGCCMYEMAAHRPAF----------KAFDMAGLISK-------- 218
E+L Y D+WS+GC EM +P F K FD+ GL +
Sbjct: 189 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 248
Query: 219 INRSSI---GPLP-SCYSPSLK----TLIKGMLRKNPEHRPSASELLKHPFLQ 263
+ R + GP P P ++ L+ ML NP R SA L+H +L
Sbjct: 249 LPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 301
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 127/283 (44%), Gaps = 35/283 (12%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
E + D E + ++GRGA+G + H + +K+IR ++ +R +
Sbjct: 46 FEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 105
Query: 61 RVQHPYIVEFKEAWVEKG-CYVCIVTGYCEGGDMAELMKKS----------NGAYFPEEK 109
V P+ V F A +G ++C+ ELM S G PE+
Sbjct: 106 TVDCPFTVTFYGALFREGDVWICM-----------ELMDTSLDKFYKQVIDKGQTIPEDI 154
Query: 110 LCKWFAQLLLAVDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV- 167
L K ++ A+++LHS V+HRD+K SN+ + V++ DFG++ L D +A ++
Sbjct: 155 LGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL-VDSVAKTID 213
Query: 168 VGTPNYMCPEL----LADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSS 223
G YM PE L Y KSDIWSLG M E+A R + ++ ++ +
Sbjct: 214 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP--FQQLKQVV 271
Query: 224 IGPLPSC----YSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
P P +S L+KN + RP+ EL++HPF
Sbjct: 272 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 126/266 (47%), Gaps = 14/266 (5%)
Query: 4 RMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-----KIRLARQTERCRRSAHQEMAL 58
++ Y + + +G G FG + H+ K +K KIR + +R E+
Sbjct: 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKR----EIQN 64
Query: 59 IARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
+ +HP+I++ + + +V Y GG++ + + K E + + F Q+L
Sbjct: 65 LKLFRHPHIIKLYQV-ISTPTDFFMVMEYVSGGELFDYICKHGRV--EEMEARRLFQQIL 121
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPEL 178
AVDY H + V+HRDLK N+ L + ++ DFGL+ + + G+PNY PE+
Sbjct: 122 SAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEV 181
Query: 179 LADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
++ Y G + DIWS G +Y + F + L KI R + +P + S+ T
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPEYLNRSVAT 240
Query: 238 LIKGMLRKNPEHRPSASELLKHPFLQ 263
L+ ML+ +P R + ++ +H + +
Sbjct: 241 LLMHMLQVDPLKRATIKDIREHEWFK 266
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 38/304 (12%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTER---CRRSAHQEMA 57
++SR +YE ++ +G G F + + +KKI+L ++E R+A +E+
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 58 LIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
L+ + HP I+ +A+ K + +V + E D+ E++ K N + +
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSN-ISLVFDFMET-DL-EVIIKDNSLVLTPSHIKAYMLMT 121
Query: 118 LLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASS-VVGTPNYMCP 176
L ++YLH +++LHRDLK +N+ L ++ ++L DFGLAK+ + + A V T Y P
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAP 181
Query: 177 ELLADI-PYGFKSDIWSLGCCMYEMAAHRPAF----------KAF------------DMA 213
ELL YG D+W++GC + E+ P + F DM
Sbjct: 182 ELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 241
Query: 214 GLISKINRSSIGPLP-----SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQ 268
L + S +P S L LI+G+ NP R +A++ LK +++F ++
Sbjct: 242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK---MKYFSNR 298
Query: 269 YRPT 272
PT
Sbjct: 299 PGPT 302
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 142/316 (44%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI +R+ +E+ ++ R +H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTL-REIKILLRFRHEN 86
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 142
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L+ +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 322 D---PSDEPIAEAPFK 334
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 120/257 (46%), Gaps = 27/257 (10%)
Query: 13 QIGRGAFGAAILVNHRAEKKKY----VLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
++GRG+FG HR E K+ +KK+RL E R +E+ A + P IV
Sbjct: 100 RLGRGSFGEV----HRMEDKQTGFQCAVKKVRL----EVFRA---EELMACAGLTSPRIV 148
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
A V +G +V I EGG + +L+K+ PE++ + Q L ++YLHS
Sbjct: 149 PLYGA-VREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEYLHSRR 205
Query: 129 VLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVV------GTPNYMCPELLAD 181
+LH D+K N+ L+ D L DFG A L+ D L S++ GT +M PE++
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRS--SIGPLPSCYSPSLKTLI 239
K D+WS C M M + F L KI + +P +P I
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAI 325
Query: 240 KGMLRKNPEHRPSASEL 256
+ LRK P HR SA+EL
Sbjct: 326 QEGLRKEPIHRVSAAEL 342
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 97.8 bits (242), Expect = 3e-20, Method: Composition-based stats.
Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 20/290 (6%)
Query: 4 RMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR----LARQTERCRRSAHQEMALI 59
+++ +E+ + +G+G+FG L + + + +K ++ L C + ++L
Sbjct: 16 KIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA 75
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+HP++ + K + V Y GGD+ ++ + F + + A+++L
Sbjct: 76 W--EHPFLTHMFCTFQTKE-NLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIIL 130
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAK-TLKADDLASSVVGTPNYMCPEL 178
+ +LHS +++RDLK NI L KD +++ DFG+ K + D + GTP+Y+ PE+
Sbjct: 131 GLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEI 190
Query: 179 LADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL-PSCYSPSLKT 237
L Y D WS G +YEM + F D L I + P P K
Sbjct: 191 LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKD 248
Query: 238 LIKGMLRKNPEHRPSA-SELLKHPFLQHF------VDQYRPTFPPAACSP 280
L+ + + PE R ++ +HP + + P F P SP
Sbjct: 249 LLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSP 298
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 141/316 (44%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ +H
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLAFRHEN 84
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 140
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF--KAF-----------------DMAGLISK 218
+ + KS DIWS+GC + EM ++RP F K + D+ +I+
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 260
Query: 219 INRSSIGPL------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
R+ + L P+ S +L L K ML NP R + L HP+L +
Sbjct: 261 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLAQYY 319
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 320 D---PSDEPIAEAPFK 332
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 139/316 (43%), Gaps = 49/316 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+Y + IG GA+G K + +KKI C+R+ +E+ ++ +H
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLAFRHEN 84
Query: 67 IVEFKEAW----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
I+ + +E+ V IV E D+ +L+K + + +C + Q+L +
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLK 140
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD----LASSVVGTPNYMCPEL 178
Y+HS VLHRDLK SN+ L D+++ DFGLA+ D + V T Y PE+
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 179 LADIPYGFKS-DIWSLGCCMYEMAAHRPAF-------KAFDMAGLISK---------INR 221
+ + KS DIWS+GC + EM ++RP F + + G++ IN
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINL 260
Query: 222 SSIGPL---------------PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFV 266
+ L P+ S +L L K ML NP R + L HP+L +
Sbjct: 261 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK-MLTFNPHKRIEVEQALAHPYLAQYY 319
Query: 267 DQYRPTFPPAACSPEK 282
D P+ P A +P K
Sbjct: 320 D---PSDEPIAEAPFK 332
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 128/263 (48%), Gaps = 12/263 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTER--CRRSAHQEMALIAR 61
++ ++I +G+G FG L R + K++L K+ Q E+ +E+ + +
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARER--QSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH 68
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 69 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSR---FDEQRTATYITELANA 124
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y HS V+HRD+K N+ L + ++++ DFG + + +++ GT +Y+ PE++
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIE 183
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+WSLG YE P F+A +I+R P + + LI
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEF-TFPDFVTEGARDLIS 242
Query: 241 GMLRKNPEHRPSASELLKHPFLQ 263
+L+ N R + +E+L+HP+++
Sbjct: 243 RLLKHNASQRLTLAEVLEHPWIK 265
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 128/266 (48%), Gaps = 18/266 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIAR 61
++ ++I +G+G FG L R + K++L K+ Q E+ +E+ + +
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARER--QSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH 68
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMA-ELMKKSNGAYFPEEKLCKWFAQLLLA 120
++HP I+ + V ++ Y G + EL K S F E++ + +L A
Sbjct: 69 LRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLSR---FDEQRTATYITELANA 124
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGL---AKTLKADDLASSVVGTPNYMCPE 177
+ Y HS V+HRD+K N+ L + ++++ DFG A + + D L GT +Y+ PE
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC----GTLDYLPPE 180
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
++ + K D+WSLG YE P F+A +I+R P + +
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEF-TFPDFVTEGARD 239
Query: 238 LIKGMLRKNPEHRPSASELLKHPFLQ 263
LI +L+ N R + +E+L+HP+++
Sbjct: 240 LISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 135/296 (45%), Gaps = 30/296 (10%)
Query: 4 RMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR--LARQTERCRRSAHQEMALIAR 61
++ + + +G+G+FG +L + + Y +K ++ + Q + + ++ L
Sbjct: 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 77
Query: 62 VQHPYIVEFKEAWVEKGCY-----VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQ 116
+ P++ + C+ + V Y GGD+ +++ F E + A+
Sbjct: 78 GKPPFLTQLHS------CFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAE 129
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASS-VVGTPNYMC 175
+ + + +L S +++RDLK N+ L + +++ DFG+ K D + + GTP+Y+
Sbjct: 130 IAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIA 189
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSL 235
PE++A PYG D W+ G +YEM A + F+ D L I ++ P S
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA-YPKSMSKEA 248
Query: 236 KTLIKGMLRKNPEHRPSAS-----ELLKHPFLQHFVD-------QYRPTFPPAACS 279
+ KG++ K+P R ++ +H F + ++D + +P + P AC
Sbjct: 249 VAICKGLMTKHPGKRLGCGPEGERDIKEHAFFR-YIDWEKLERKEIQPPYKPKACG 303
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 19/239 (7%)
Query: 54 QEMALIARVQHPYIVEFKEA-WVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK 112
+E+ L+ R++H +++ + + E+ + +V YC G M E++ FP +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHG 113
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK---ADDLASSVVG 169
+F QL+ ++YLHS ++H+D+K N+ LT +++ G+A+ L ADD + G
Sbjct: 114 YFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQG 173
Query: 170 TPNYMCPELL--ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL 227
+P + PE+ D GFK DIWS G +Y + F+ ++ L I + S +
Sbjct: 174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYA-I 232
Query: 228 PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPAACSPEKPISI 286
P P L L+KGML P R S ++ +H + +R PPA E P+ I
Sbjct: 233 PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSW-------FRKKHPPA----EAPVPI 280
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 21/292 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILV---NHRAEKKKYVLKKIRL--------ARQTERCRRSAHQ 54
+ Y + ++G GA+G +L N +EK V+KK + + E+ +
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 55 EMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF 114
E++L+ + HP I++ + + +K Y +VT + EGG++ E + N F E
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKK-YFYLVTEFYEGGELFEQI--INRHKFDECDAANIM 152
Query: 115 AQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ---DVRLGDFGLAKTLKADDLASSVVGTP 171
Q+L + YLH + ++HRD+K NI L ++++ DFGL+ D +GT
Sbjct: 153 KQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTA 212
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY 231
Y+ PE+L Y K D+WS G MY + P F + +I K+ + + +
Sbjct: 213 YYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDW 271
Query: 232 ---SPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPAACSP 280
S K LIK ML + R +A E L +++ + + + C
Sbjct: 272 KNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGA 323
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 126/274 (45%), Gaps = 22/274 (8%)
Query: 4 RMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR--LARQTERCRRSAHQEMALIAR 61
++ + + +G+G+FG +L + + Y +K ++ + Q + + ++ L
Sbjct: 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 398
Query: 62 VQHPYIVEFKEAWVEKGCY-----VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQ 116
+ P++ + C+ + V Y GGD+ +++ F E + A+
Sbjct: 399 GKPPFLTQLHS------CFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAE 450
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASS-VVGTPNYMC 175
+ + + +L S +++RDLK N+ L + +++ DFG+ K D + + GTP+Y+
Sbjct: 451 IAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIA 510
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSL 235
PE++A PYG D W+ G +YEM A + F+ D L I ++ P S
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA-YPKSMSKEA 569
Query: 236 KTLIKGMLRKNPEHRPSAS-----ELLKHPFLQH 264
+ KG++ K+P R ++ +H F ++
Sbjct: 570 VAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 603
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 42/290 (14%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
+G GA+G+ ++K +KK+ Q+ R ++E+ L+ ++H ++ +
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 74 W-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
+ +E V +VT G D+ ++K +E + QLL + Y+HS
Sbjct: 96 FTPATSIEDFSEVYLVTTLM-GADLNNIVKSQA---LSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLAD-IPYGFK 187
++HRDLK SN+ + +D ++R+ DFGLA+ +AD+ + V T Y PE++ + + Y
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 188 SDIWSLGCCMYEMAAHRPAFKAFD-------------------MAGLISKINRSSIGPLP 228
DIWS+GC M E+ + F D +A + S+ R+ I LP
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 269
Query: 229 SCYSPSLKTLIKG-----------MLRKNPEHRPSASELLKHPFLQHFVD 267
L ++ +G ML + + R SA+E L H + + D
Sbjct: 270 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHD 319
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 95.9 bits (237), Expect = 1e-19, Method: Composition-based stats.
Identities = 74/292 (25%), Positives = 139/292 (47%), Gaps = 37/292 (12%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M++YE + +G G++G + ++ + +KK + + ++ A +E+ L+ +++H
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V E +K + +V + + + +L NG + + + K+ Q++ + +
Sbjct: 84 ENLVNLLEVCKKKKRWY-LVFEFVDHTILDDLELFPNGLDY--QVVQKYLFQIINGIGFC 140
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA-DDLASSVVGTPNYMCPELL-ADI 182
HS+ ++HRD+K NI +++ V+L DFG A+TL A ++ V T Y PELL D+
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDV 200
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKA-----------FDMAGLISK----INRSSI--- 224
YG D+W++GC + EM P F + LI + N++ +
Sbjct: 201 KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260
Query: 225 ---------GPLPSCYSPSLKTLIKGMLRK----NPEHRPSASELLKHPFLQ 263
PL Y P L ++ + +K +P+ RP +ELL H F Q
Sbjct: 261 VRLPEIKEREPLERRY-PKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 119/257 (46%), Gaps = 27/257 (10%)
Query: 13 QIGRGAFGAAILVNHRAEKKKY----VLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
++GRG+FG HR E K+ +KK+RL E R +E+ A + P IV
Sbjct: 81 RLGRGSFGEV----HRMEDKQTGFQCAVKKVRL----EVFRA---EELMACAGLTSPRIV 129
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
A V +G +V I EGG + +L+K+ PE++ + Q L ++YLHS
Sbjct: 130 PLYGA-VREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEYLHSRR 186
Query: 129 VLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVV------GTPNYMCPELLAD 181
+LH D+K N+ L+ D L DFG A L+ D L ++ GT +M PE++
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRS--SIGPLPSCYSPSLKTLI 239
K D+WS C M M + F L KI + +P +P I
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAI 306
Query: 240 KGMLRKNPEHRPSASEL 256
+ LRK P HR SA+EL
Sbjct: 307 QEGLRKEPIHRVSAAEL 323
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 4/219 (1%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ Y + + IG+G F L H ++ +K I + + +E+ ++ + H
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV+ E +E + +V Y GG++ + + ++G +E K F Q++ AV Y
Sbjct: 74 PNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAK-FRQIVSAVQYC 130
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY 184
H Y++HRDLK N+ L D ++++ DFG + + + G+P Y PEL Y
Sbjct: 131 HQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKY 190
Query: 185 -GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRS 222
G + D+WSLG +Y + + F ++ L ++ R
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG 229
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 32/278 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKK-YVLKKIRLARQTERCRRSAHQEMALIARVQH-- 64
Y I++QIG G G++ + EKK+ Y +K + L + S E+A + ++Q
Sbjct: 58 YSILKQIGSG--GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
I+ + + Y+ +V C D+ +KK + P E+ W +L AV +
Sbjct: 116 DKIIRLYDYEITDQ-YIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYW-KNMLEAVHTI 171
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + ++H DLK +N FL D ++L DFG+A ++ D + S VGT NYM PE + D
Sbjct: 172 HQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 182 IPYGFKS-----------DIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGP---- 226
+ ++ D+WSLGC +Y M + F+ + ISK++ + I P
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ--IINQISKLH-AIIDPNHEI 287
Query: 227 -LPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
P L+ ++K L+++P+ R S ELL HP++Q
Sbjct: 288 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 111/227 (48%), Gaps = 18/227 (7%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR----LARQTERCRRSAHQEMALIAR 61
D +EI++ IGRGAF +V + + Y +K + L R C R +E ++
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFR---EERDVLVN 117
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
+I + A+ ++ Y+ +V Y GGD+ L+ K G P E + A++++A+
Sbjct: 118 GDRRWITQLHFAFQDEN-YLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAI 175
Query: 122 DYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV--VGTPNYMCPELL 179
D +H +HRD+K NI L + +RL DFG L+AD S+ VGTP+Y+ PE+L
Sbjct: 176 DSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEIL 235
Query: 180 ADIPYGF-------KSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI 219
+ G + D W+LG YEM + F A A KI
Sbjct: 236 QAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 122/263 (46%), Gaps = 9/263 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+D Y+I E++G GAFG V RA + K + ++++ + +E+ ++ ++H
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK--ETVRKEIQTMSVLRH 107
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P +V +A+ E + ++ + GG++ E + + E++ ++ Q+ + ++
Sbjct: 108 PTLVNLHDAF-EDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHM 165
Query: 125 HSNYVLHRDLKCSNIFLT--KDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
H N +H DLK NI T + +++L DFGL L GT + PE+
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 225
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY---SPSLKTLI 239
P G+ +D+WS+G Y + + F + + + S + S K I
Sbjct: 226 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI 285
Query: 240 KGMLRKNPEHRPSASELLKHPFL 262
+ +L +P R + + L+HP+L
Sbjct: 286 RKLLLADPNTRMTIHQALEHPWL 308
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 124/269 (46%), Gaps = 16/269 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+I E++G G F ++ +Y K I+ RQ+ RR +E++++
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILR 70
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+V H ++ + + E V ++ GG++ + + + EE+ + Q+L
Sbjct: 71 QVLHHNVITLHDVY-ENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQ----DVRLGDFGLAKTLKADDLASSVVGTPNYMCP 176
V+YLH+ + H DLK NI L ++L DFGLA ++ ++ GTP ++ P
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 177 ELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPS-- 234
E++ P G ++D+WS+G Y + + F ++ I S +S +
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSE 247
Query: 235 -LKTLIKGMLRKNPEHRPSASELLKHPFL 262
K I+ +L K R + E L+HP++
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 124/269 (46%), Gaps = 16/269 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+I E++G G F ++ +Y K I+ RQ+ RR +E++++
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILR 70
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+V H ++ + + E V ++ GG++ + + + EE+ + Q+L
Sbjct: 71 QVLHHNVITLHDVY-ENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQ----DVRLGDFGLAKTLKADDLASSVVGTPNYMCP 176
V+YLH+ + H DLK NI L ++L DFGLA ++ ++ GTP ++ P
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 177 ELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPS-- 234
E++ P G ++D+WS+G Y + + F ++ I S +S +
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSE 247
Query: 235 -LKTLIKGMLRKNPEHRPSASELLKHPFL 262
K I+ +L K R + E L+HP++
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 122/263 (46%), Gaps = 9/263 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+D Y+I E++G GAFG V RA + K + ++++ + +E+ ++ ++H
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK--ETVRKEIQTMSVLRH 213
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P +V +A+ E + ++ + GG++ E + + E++ ++ Q+ + ++
Sbjct: 214 PTLVNLHDAF-EDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHM 271
Query: 125 HSNYVLHRDLKCSNIFLT--KDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI 182
H N +H DLK NI T + +++L DFGL L GT + PE+
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 331
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY---SPSLKTLI 239
P G+ +D+WS+G Y + + F + + + S + S K I
Sbjct: 332 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI 391
Query: 240 KGMLRKNPEHRPSASELLKHPFL 262
+ +L +P R + + L+HP+L
Sbjct: 392 RKLLLADPNTRMTIHQALEHPWL 414
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 32/278 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKK-YVLKKIRLARQTERCRRSAHQEMALIARVQH-- 64
Y I++QIG G G++ + EKK+ Y +K + L + S E+A + ++Q
Sbjct: 58 YSILKQIGSG--GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
I+ + + Y+ +V C D+ +KK + P E+ W +L AV +
Sbjct: 116 DKIIRLYDYEITDQ-YIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYW-KNMLEAVHTI 171
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + ++H DLK +N FL D ++L DFG+A ++ D + S VGT NYM PE + D
Sbjct: 172 HQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 182 IPYGFKS-----------DIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGP---- 226
+ ++ D+WSLGC +Y M + F+ + ISK++ + I P
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLH-AIIDPNHEI 287
Query: 227 -LPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
P L+ ++K L+++P+ R S ELL HP++Q
Sbjct: 288 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 124/269 (46%), Gaps = 16/269 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+I E++G G F ++ +Y K I+ RQ+ RR +E++++
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILR 70
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+V H ++ + + E V ++ GG++ + + + EE+ + Q+L
Sbjct: 71 QVLHHNVITLHDVY-ENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQ----DVRLGDFGLAKTLKADDLASSVVGTPNYMCP 176
V+YLH+ + H DLK NI L ++L DFGLA ++ ++ GTP ++ P
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 177 ELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPS-- 234
E++ P G ++D+WS+G Y + + F ++ I S +S +
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSE 247
Query: 235 -LKTLIKGMLRKNPEHRPSASELLKHPFL 262
K I+ +L K R + E L+HP++
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 124/269 (46%), Gaps = 16/269 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSA-----HQEMALIA 60
D Y+I E++G G F ++ +Y K I+ RQ+ RR +E++++
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILR 70
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+V H ++ + + E V ++ GG++ + + + EE+ + Q+L
Sbjct: 71 QVLHHNVITLHDVY-ENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDG 127
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQ----DVRLGDFGLAKTLKADDLASSVVGTPNYMCP 176
V+YLH+ + H DLK NI L ++L DFGLA ++ ++ GTP ++ P
Sbjct: 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP 187
Query: 177 ELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPS-- 234
E++ P G ++D+WS+G Y + + F ++ I S +S +
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSE 247
Query: 235 -LKTLIKGMLRKNPEHRPSASELLKHPFL 262
K I+ +L K R + E L+HP++
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 19/263 (7%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
Q + ++IG G+FG V +K + + T + ++ E+ ++ + +H
Sbjct: 13 QITVGQRIGSGSFGT---VYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 69
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ F + IVT +CEG + + S F +KL Q +DYLH+
Sbjct: 70 ILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHA 126
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS----SVVGTPNYMCPELLA-- 180
++HRDLK +NIFL +D V++GDFGLA T+K+ S + G+ +M PE++
Sbjct: 127 KSIIHRDLKSNNIFLHEDNTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 181 -DIPYGFKSDIWSLGCCMYE-MAAHRPAFKAFDMAGLISKINRSSIGP----LPSCYSPS 234
PY F+SD+++ G +YE M P + +I + R S+ P + S
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKR 245
Query: 235 LKTLIKGMLRKNPEHRPSASELL 257
+K L+ L+K + RPS +L
Sbjct: 246 MKRLMAECLKKKRDERPSFPRIL 268
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 118/254 (46%), Gaps = 21/254 (8%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
++GRG+FG + + + +KK+RL + R +E+ A + P IV
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRL--EVFRV-----EELVACAGLSSPRIVPLYG 117
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
A V +G +V I EGG + +L+K+ PE++ + Q L ++YLH+ +LH
Sbjct: 118 A-VREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILHG 174
Query: 133 DLKCSNIFLTKDQD-VRLGDFGLAKTLKADDLASSVV------GTPNYMCPELLADIPYG 185
D+K N+ L+ D L DFG A L+ D L S++ GT +M PE++ P
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 186 FKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI---NRSSIGPLPSCYSPSLKTLIKGM 242
K DIWS C M M + + L KI PSC +P I+
Sbjct: 235 AKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSC-APLTAQAIQEG 293
Query: 243 LRKNPEHRPSASEL 256
LRK P HR SA EL
Sbjct: 294 LRKEPVHRASAMEL 307
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 42/290 (14%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
+G GA+G+ ++K +KK+ Q+ R ++E+ L+ ++H ++ +
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 74 W-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
+ +E V +VT G D+ ++K +E + QLL + Y+HS
Sbjct: 96 FTPATSIEDFSEVYLVTTLM-GADLNNIVKCQA---LSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLAD-IPYGFK 187
++HRDLK SN+ + +D ++R+ DFGLA+ +AD+ + V T Y PE++ + + Y
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 188 SDIWSLGCCMYEMAAHRPAFKAFD-------------------MAGLISKINRSSIGPLP 228
DIWS+GC M E+ + F D +A + S+ R+ I LP
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 269
Query: 229 SCYSPSLKTLIKG-----------MLRKNPEHRPSASELLKHPFLQHFVD 267
L ++ +G ML + + R SA+E L H + + D
Sbjct: 270 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHD 319
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 94.4 bits (233), Expect = 3e-19, Method: Composition-based stats.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 20/290 (6%)
Query: 4 RMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR----LARQTERCRRSAHQEMALI 59
+++ + + + +G+G+FG L + + + +K ++ L C + ++L
Sbjct: 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA 74
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+HP++ + K + V Y GGD+ ++ + F + + A+++L
Sbjct: 75 W--EHPFLTHMFCTFQTKE-NLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIIL 129
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAK-TLKADDLASSVVGTPNYMCPEL 178
+ +LHS +++RDLK NI L KD +++ DFG+ K + D + GTP+Y+ PE+
Sbjct: 130 GLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEI 189
Query: 179 LADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPL-PSCYSPSLKT 237
L Y D WS G +YEM + F D L I + P P K
Sbjct: 190 LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKD 247
Query: 238 LIKGMLRKNPEHRPSA-SELLKHPFLQHF------VDQYRPTFPPAACSP 280
L+ + + PE R ++ +HP + + P F P SP
Sbjct: 248 LLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSP 297
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 121/262 (46%), Gaps = 17/262 (6%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
Q + ++IG G+FG V +K + + T + ++ E+ ++ + +H
Sbjct: 25 QITVGQRIGSGSFGT---VYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ F + IVT +CEG + + S F +KL Q +DYLH+
Sbjct: 82 ILLFMG--YSTAPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHA 138
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLA---KTLKADDLASSVVGTPNYMCPELLA--- 180
++HRDLK +NIFL +D V++GDFGLA + G+ +M PE++
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 181 DIPYGFKSDIWSLGCCMYE-MAAHRPAFKAFDMAGLISKINRSSIGP----LPSCYSPSL 235
PY F+SD+++ G +YE M P + +I + R S+ P + S +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 236 KTLIKGMLRKNPEHRPSASELL 257
K L+ L+K + RPS +L
Sbjct: 259 KRLMAECLKKKRDERPSFPRIL 280
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 44/297 (14%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
Y ++ +G GA+GA K +KK+ Q+E + A++E+ L+ ++H +
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 68 VEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
+ + + ++ +V + G D+ +LMK E+++ Q+L +
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEK---LGEDRIQFLVYQMLKGLR 142
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLAD- 181
Y+H+ ++HRDLK N+ + +D ++++ DFGLA+ +AD V T Y PE++ +
Sbjct: 143 YIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMXGXVVTRWYRAPEVILNW 200
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFD------------------------------ 211
+ Y DIWS+GC M EM + FK D
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260
Query: 212 -MAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
M GL ++ + + + SP L++ ML + E R +A E L HP+ + D
Sbjct: 261 YMKGL-PELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 93.6 bits (231), Expect = 5e-19, Method: Composition-based stats.
Identities = 80/254 (31%), Positives = 118/254 (46%), Gaps = 21/254 (8%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
++GRG+FG + + + +KK+RL + R +E+ A + P IV
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRL--EVFRV-----EELVACAGLSSPRIVPLYG 133
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
A V +G +V I EGG + +L+K+ PE++ + Q L ++YLH+ +LH
Sbjct: 134 A-VREGPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHG 190
Query: 133 DLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVV------GTPNYMCPELLADIPYG 185
D+K N+ L+ D L DFG A L+ D L S++ GT +M PE++ P
Sbjct: 191 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 250
Query: 186 FKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI---NRSSIGPLPSCYSPSLKTLIKGM 242
K DIWS C M M + + L KI PSC +P I+
Sbjct: 251 AKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSC-APLTAQAIQEG 309
Query: 243 LRKNPEHRPSASEL 256
LRK P HR SA EL
Sbjct: 310 LRKEPVHRASAMEL 323
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 32/278 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKK-YVLKKIRLARQTERCRRSAHQEMALIARVQHP- 65
Y I++QIG G G++ + EKK+ Y +K + L + S E+A + ++Q
Sbjct: 11 YSILKQIGSG--GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68
Query: 66 -YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
I+ + + Y+ +V C D+ +KK + P E+ W +L AV +
Sbjct: 69 DKIIRLYDYEITDQ-YIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYW-KNMLEAVHTI 124
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + ++H DLK +N FL D ++L DFG+A ++ D + S VGT NYM PE + D
Sbjct: 125 HQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 182 IPYGFKS-----------DIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGP---- 226
+ ++ D+WSLGC +Y M + F+ + ISK++ + I P
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLH-AIIDPNHEI 240
Query: 227 -LPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
P L+ ++K L+++P+ R S ELL HP++Q
Sbjct: 241 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 118/254 (46%), Gaps = 21/254 (8%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
++GRG+FG + + + +KK+RL + R +E+ A + P IV
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRL--EVFRV-----EELVACAGLSSPRIVPLYG 131
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
A V +G +V I EGG + +L+K+ PE++ + Q L ++YLH+ +LH
Sbjct: 132 A-VREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILHG 188
Query: 133 DLKCSNIFLTKDQD-VRLGDFGLAKTLKADDLASSVV------GTPNYMCPELLADIPYG 185
D+K N+ L+ D L DFG A L+ D L S++ GT +M PE++ P
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 186 FKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI---NRSSIGPLPSCYSPSLKTLIKGM 242
K DIWS C M M + + L KI PSC +P I+
Sbjct: 249 AKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSC-APLTAQAIQEG 307
Query: 243 LRKNPEHRPSASEL 256
LRK P HR SA EL
Sbjct: 308 LRKEPVHRASAMEL 321
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 121/262 (46%), Gaps = 17/262 (6%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
Q + ++IG G+FG + +K + + T + ++ E+ ++ + +H
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ F + IVT +CEG + + S F +KL Q +DYLH+
Sbjct: 82 ILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHA 138
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLA---KTLKADDLASSVVGTPNYMCPELLA--- 180
++HRDLK +NIFL +D V++GDFGLA + G+ +M PE++
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 181 DIPYGFKSDIWSLGCCMYE-MAAHRPAFKAFDMAGLISKINRSSIGP----LPSCYSPSL 235
PY F+SD+++ G +YE M P + +I + R S+ P + S +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 236 KTLIKGMLRKNPEHRPSASELL 257
K L+ L+K + RPS +L
Sbjct: 259 KRLMAECLKKKRDERPSFPRIL 280
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 140/298 (46%), Gaps = 20/298 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-----KIRLARQTERCRRSAHQEMALI 59
M+ + + IGRG FG K Y +K +I++ +Q E + ++L+
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLV 245
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ P+IV A+ + + GGD+ + S F E + + A+++L
Sbjct: 246 STGDCPFIVCMSYAF-HTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIIL 302
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
++++H+ +V++RDLK +NI L + VR+ D GLA +S VGT YM PE+L
Sbjct: 303 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVL 361
Query: 180 AD-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGL--ISKINRSSIGPLPSCYSPSLK 236
+ Y +D +SLGC ++++ F+ I ++ + LP +SP L+
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR 421
Query: 237 TLIKGMLRKNPEHR-----PSASELLKHPFLQHFVDQ--YRPTFPPAACSPEKPISIA 287
+L++G+L+++ R A E+ + PF + Q + +PP P ++ A
Sbjct: 422 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAA 479
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKK-YVLKKIRLARQTERCRRSAHQEMALIARVQH-- 64
Y I++QIG G G++ + EKK+ Y +K + L + S E+A + ++Q
Sbjct: 58 YSILKQIGSG--GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
I+ + + Y+ +V C D+ +KK + P E+ W +L AV +
Sbjct: 116 DKIIRLYDYEITDQ-YIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYW-KNMLEAVHTI 171
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + ++H DLK +N FL D ++L DFG+A ++ D + S VG NYM PE + D
Sbjct: 172 HQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230
Query: 182 IPYGFKS-----------DIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGP---- 226
+ ++ D+WSLGC +Y M + F+ + ISK++ + I P
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLH-AIIDPNHEI 287
Query: 227 -LPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
P L+ ++K L+++P+ R S ELL HP++Q
Sbjct: 288 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 140/298 (46%), Gaps = 20/298 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-----KIRLARQTERCRRSAHQEMALI 59
M+ + + IGRG FG K Y +K +I++ +Q E + ++L+
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLV 246
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ P+IV A+ + + GGD+ + S F E + + A+++L
Sbjct: 247 STGDCPFIVCMSYAF-HTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIIL 303
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
++++H+ +V++RDLK +NI L + VR+ D GLA +S VGT YM PE+L
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVL 362
Query: 180 AD-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGL--ISKINRSSIGPLPSCYSPSLK 236
+ Y +D +SLGC ++++ F+ I ++ + LP +SP L+
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR 422
Query: 237 TLIKGMLRKNPEHR-----PSASELLKHPFLQHFVDQ--YRPTFPPAACSPEKPISIA 287
+L++G+L+++ R A E+ + PF + Q + +PP P ++ A
Sbjct: 423 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAA 480
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 121/264 (45%), Gaps = 14/264 (5%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK---KIRLARQTERCRRSAHQEMALIAR 61
+ YE+ E IG G F L H + +K K L R + E+ +
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIK----TEIEALKN 64
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
++H +I + +E + +V YC GG++ + + + EE+ F Q++ AV
Sbjct: 65 LRHQHICQLYHV-LETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSAV 121
Query: 122 DYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDLASSVVGTPNYMCPELL 179
Y+HS HRDLK N+ + ++L DFGL K D + G+ Y PEL+
Sbjct: 122 AYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELI 181
Query: 180 ADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTL 238
Y G ++D+WS+G +Y + F ++ L KI R +P SPS L
Sbjct: 182 QGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKY-DVPKWLSPSSILL 240
Query: 239 IKGMLRKNPEHRPSASELLKHPFL 262
++ ML+ +P+ R S LL HP++
Sbjct: 241 LQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 32/278 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKK-YVLKKIRLARQTERCRRSAHQEMALIARVQH-- 64
Y I++QIG G G++ + EKK+ Y +K + L + S E+A + ++Q
Sbjct: 10 YSILKQIGSG--GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 67
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
I+ + + Y+ +V C D+ +KK + P E+ W +L AV +
Sbjct: 68 DKIIRLYDYEITDQ-YIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYW-KNMLEAVHTI 123
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + ++H DLK +N FL D ++L DFG+A ++ D + S VGT NYM PE + D
Sbjct: 124 HQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 182 IPYGFKS-----------DIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGP---- 226
+ ++ D+WSLGC +Y M + F+ + ISK++ + I P
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLH-AIIDPNHEI 239
Query: 227 -LPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
P L+ ++K L+++P+ R S ELL HP++Q
Sbjct: 240 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 46/300 (15%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
Q++ +E++G G + ++ LK+++L + E +A +E++L+ ++H
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHEN 64
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFP---EEKLCKWF-AQLLLAVD 122
IV + + + +V + + D+ + M P E L K+F QLL +
Sbjct: 65 IVRLYDV-IHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPE-LL 179
+ H N +LHRDLK N+ + K ++LGDFGLA+ + +S VV T Y P+ L+
Sbjct: 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVLM 181
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKA----------FDMAGLISKINRSSIGPLPS 229
Y DIWS GC + EM +P F FD+ G ++ S+ LP
Sbjct: 182 GSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK 241
Query: 230 CYSPSLKT------------------------LIKGMLRKNPEHRPSASELLKHPFLQHF 265
Y+P+++ + G+L+ NP+ R SA + L HP+ +
Sbjct: 242 -YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY 300
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 140/298 (46%), Gaps = 20/298 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-----KIRLARQTERCRRSAHQEMALI 59
M+ + + IGRG FG K Y +K +I++ +Q E + ++L+
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLV 246
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ P+IV A+ + + GGD+ + S F E + + A+++L
Sbjct: 247 STGDCPFIVCMSYAF-HTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIIL 303
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
++++H+ +V++RDLK +NI L + VR+ D GLA +S VGT YM PE+L
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVL 362
Query: 180 AD-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGL--ISKINRSSIGPLPSCYSPSLK 236
+ Y +D +SLGC ++++ F+ I ++ + LP +SP L+
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR 422
Query: 237 TLIKGMLRKNPEHR-----PSASELLKHPFLQHFVDQ--YRPTFPPAACSPEKPISIA 287
+L++G+L+++ R A E+ + PF + Q + +PP P ++ A
Sbjct: 423 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAA 480
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 140/298 (46%), Gaps = 20/298 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-----KIRLARQTERCRRSAHQEMALI 59
M+ + + IGRG FG K Y +K +I++ +Q E + ++L+
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLV 246
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ P+IV A+ + + GGD+ + S F E + + A+++L
Sbjct: 247 STGDCPFIVCMSYAF-HTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIIL 303
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
++++H+ +V++RDLK +NI L + VR+ D GLA +S VGT YM PE+L
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVL 362
Query: 180 AD-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGL--ISKINRSSIGPLPSCYSPSLK 236
+ Y +D +SLGC ++++ F+ I ++ + LP +SP L+
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR 422
Query: 237 TLIKGMLRKNPEHR-----PSASELLKHPFLQHFVDQ--YRPTFPPAACSPEKPISIA 287
+L++G+L+++ R A E+ + PF + Q + +PP P ++ A
Sbjct: 423 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAA 480
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 42/290 (14%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
+G GA+G+ ++K +KK+ Q+ R ++E+ L+ ++H ++ +
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 74 W-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
+ +E V +VT G D+ ++K +E + QLL + Y+HS
Sbjct: 88 FTPATSIEDFSEVYLVTTLM-GADLNNIVKCQA---LSDEHVQFLVYQLLRGLKYIHSAG 143
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLAD-IPYGFK 187
++HRDLK SN+ + +D ++R+ DFGLA+ +AD+ + V T Y PE++ + + Y
Sbjct: 144 IIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHYNQT 201
Query: 188 SDIWSLGCCMYEMAAHRPAFKAFD-------------------MAGLISKINRSSIGPLP 228
DIWS+GC M E+ + F D +A + S+ R+ I LP
Sbjct: 202 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 261
Query: 229 SCYSPSLKTLIKG-----------MLRKNPEHRPSASELLKHPFLQHFVD 267
L ++ +G ML + + R SA+E L H + + D
Sbjct: 262 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHD 311
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 17/219 (7%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +YE + +IG+G FG HR +K LKK+ + + E +A +E+ ++ ++H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 65 PYIVEFKEAWVEKGC-------YVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
+V E K + +V +CE D+A L+ + E K Q+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSE--IKRVMQM 133
Query: 118 LL-AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-----DLASSVVGTP 171
LL + Y+H N +LHRD+K +N+ +T+D ++L DFGLA+ + + V T
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 172 NYMCPE-LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA 209
Y PE LL + YG D+W GC M EM P +
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 232
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 138/298 (46%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ K +KK+ Q+ + ++E+ L+ ++H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 166
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 167 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 224
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKI----N 220
+ + Y DIWS+GC M E+ R F D A +IS++
Sbjct: 225 NWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEA 284
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I LP +P L++ ML + + R +ASE L HP+ + D
Sbjct: 285 RNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHD 342
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 124/312 (39%), Gaps = 41/312 (13%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
I+ + + Y M + + E++ Q+L + +L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHL 142
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY 184
HS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++ + Y
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 185 GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI------------------------N 220
DIWS+GC M EM H+ F D +K+ N
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 221 RSSIGPL--PSCYSPSL---------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
R L P + SL + L+ ML +P R S + L+HP++
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 264 HFVDQYRPTFPP 275
+ D PP
Sbjct: 323 VWYDPAEVEAPP 334
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 92.0 bits (227), Expect = 2e-18, Method: Composition-based stats.
Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 15/262 (5%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV-QHPY 66
++ + ++G G++G V + + + Y +K+ + + R E+ +V QHP
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
V ++AW E+G + + T C G + ++ GA PE ++ + LLA+ +LHS
Sbjct: 119 CVRLEQAW-EEGGILYLQTELC--GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGF 186
++H D+K +NIFL +LGDFGL L G P YM PELL YG
Sbjct: 176 QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGT 234
Query: 187 KSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY----SPSLKTLIKGM 242
+D++SLG + E+A + ++ + G LP + S L++++ M
Sbjct: 235 AADVFSLGLTILEVACN------MELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMM 288
Query: 243 LRKNPEHRPSASELLKHPFLQH 264
L +P+ R +A LL P L+
Sbjct: 289 LEPDPKLRATAEALLALPVLRQ 310
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 92.0 bits (227), Expect = 2e-18, Method: Composition-based stats.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 35/286 (12%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKK-YVLKKIRLARQTERCRRSAHQEMALIARVQH-- 64
Y I++QIG G G++ + EKK+ Y +K + L + S E+A + ++Q
Sbjct: 30 YSILKQIGSG--GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
I+ + + Y+ +V C D+ +KK + P E+ W +L AV +
Sbjct: 88 DKIIRLYDYEITDQ-YIYMVM-ECGNIDLNSWLKKKK-SIDPWERKSYW-KNMLEAVHTI 143
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + ++H DLK +N FL D ++L DFG+A ++ D + S VGT NYM PE + D
Sbjct: 144 HQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKD 202
Query: 182 IPYGFKS-----------DIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGP---- 226
+ ++ D+WSLGC +Y M + F+ + ISK++ + I P
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLH-AIIDPNHEI 259
Query: 227 -LPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ---HFVDQ 268
P L+ ++K L+++P+ R S ELL HP++Q H V+Q
Sbjct: 260 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 305
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 35/286 (12%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKK-YVLKKIRLARQTERCRRSAHQEMALIARVQH-- 64
Y I++QIG G G++ + EKK+ Y +K + L + S E+A + ++Q
Sbjct: 30 YSILKQIGSG--GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
I+ + + Y+ +V C D+ +KK + P E+ W +L AV +
Sbjct: 88 DKIIRLYDYEITDQ-YIYMVM-ECGNIDLNSWLKKKK-SIDPWERKSYW-KNMLEAVHTI 143
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + ++H DLK +N FL D ++L DFG+A ++ D + S VGT NYM PE + D
Sbjct: 144 HQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 182 IPYGFKS-----------DIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGP---- 226
+ ++ D+WSLGC +Y M + F+ + ISK++ + I P
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLH-AIIDPNHEI 259
Query: 227 -LPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ---HFVDQ 268
P L+ ++K L+++P+ R S ELL HP++Q H V+Q
Sbjct: 260 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 305
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 24/274 (8%)
Query: 5 MDQYEIMEQI-GRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV- 62
+D Y++ Q+ G G G + + ++ ++K+ LK + + C + A +E+ L R
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 112
Query: 63 QHPYIVE----FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
Q P+IV ++ + + C + IV +GG++ ++ F E + + +
Sbjct: 113 QCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTK---DQDVRLGDFGLAKTLKADDLASSVVGTPNYMC 175
A+ YLHS + HRD+K N+ T + ++L DFG AK + + ++ TP Y+
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA-FDMA---GLISKINRSSI---GPLP 228
PE+L Y D+WSLG MY + P F + +A G+ ++I P
Sbjct: 232 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 291
Query: 229 SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S S +K LI+ +L+ P R + +E + HP++
Sbjct: 292 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 35/286 (12%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKK-YVLKKIRLARQTERCRRSAHQEMALIARVQH-- 64
Y I++QIG G G++ + EKK+ Y +K + L + S E+A + ++Q
Sbjct: 14 YSILKQIGSG--GSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 71
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
I+ + + Y+ +V C D+ +KK + P E+ W +L AV +
Sbjct: 72 DKIIRLYDYEITDQ-YIYMVM-ECGNIDLNSWLKKKK-SIDPWERKSYW-KNMLEAVHTI 127
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + ++H DLK +N FL D ++L DFG+A ++ D + S VGT NYM PE + D
Sbjct: 128 HQHGIVHSDLKPAN-FLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 186
Query: 182 IPYGFKS-----------DIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGP---- 226
+ ++ D+WSLGC +Y M + F+ + ISK++ + I P
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLH-AIIDPNHEI 243
Query: 227 -LPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ---HFVDQ 268
P L+ ++K L+++P+ R S ELL HP++Q H V+Q
Sbjct: 244 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 289
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 37/295 (12%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
+ M++Y+ +E++G G +G + ++ + LK+IRL + E +A +E++L+
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGV-VYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLK 74
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+ HP IV + + C + +V + E D+ +++ + N + ++ + QLL
Sbjct: 75 ELHHPNIVSLIDVIHSERC-LTLVFEFMEK-DLKKVLDE-NKTGLQDSQIKIYLYQLLRG 131
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPE- 177
V + H + +LHRDLK N+ + D ++L DFGLA+ VV T Y P+
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDV 190
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAF----------KAFDMAGLISKINRSSIGPL 227
L+ Y DIWS+GC EM +P F K F + G + + L
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL 250
Query: 228 PSCYSPSLKT-------------------LIKGMLRKNPEHRPSASELLKHPFLQ 263
P + + L+ ML +P R SA + + HP+ +
Sbjct: 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 24/274 (8%)
Query: 5 MDQYEIMEQI-GRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV- 62
+D Y++ Q+ G G G + + ++ ++K+ LK + + C + A +E+ L R
Sbjct: 66 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 118
Query: 63 QHPYIVE----FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
Q P+IV ++ + + C + IV +GG++ ++ F E + + +
Sbjct: 119 QCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 177
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTK---DQDVRLGDFGLAKTLKADDLASSVVGTPNYMC 175
A+ YLHS + HRD+K N+ T + ++L DFG AK + + ++ TP Y+
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 237
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA-FDMA---GLISKINRSSI---GPLP 228
PE+L Y D+WSLG MY + P F + +A G+ ++I P
Sbjct: 238 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 297
Query: 229 SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S S +K LI+ +L+ P R + +E + HP++
Sbjct: 298 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 17/219 (7%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +YE + +IG+G FG HR +K LKK+ + + E +A +E+ ++ ++H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 65 PYIVEFKEAWVEKG-------CYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
+V E K + +V +CE D+A L+ + E K Q+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSE--IKRVMQM 133
Query: 118 LL-AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-----DLASSVVGTP 171
LL + Y+H N +LHRD+K +N+ +T+D ++L DFGLA+ + + V T
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 172 NYMCPE-LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA 209
Y PE LL + YG D+W GC M EM P +
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 232
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 123/268 (45%), Gaps = 14/268 (5%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK--KIRLARQTER--CRRSAHQEMALIAR 61
D Y+I E++G G F ++ +Y K K R +R + R R +E++++ +
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
V H ++ + + E V ++ GG++ + + + EE+ + Q+L V
Sbjct: 72 VLHHNVITLHDVY-ENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGV 128
Query: 122 DYLHSNYVLHRDLKCSNIFLTKDQ----DVRLGDFGLAKTLKADDLASSVVGTPNYMCPE 177
+YLH+ + H DLK NI L ++L DFGLA ++ ++ GTP ++ PE
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE 188
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIG---PLPSCYSPS 234
++ P G ++D+WS+G Y + + F ++ I S S S
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 235 LKTLIKGMLRKNPEHRPSASELLKHPFL 262
K I+ +L K R + E L+HP++
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 24/274 (8%)
Query: 5 MDQYEIMEQI-GRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV- 62
+D Y++ Q+ G G G + + ++ ++K+ LK + + C + A +E+ L R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 68
Query: 63 QHPYIVE----FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
Q P+IV ++ + + C + IV +GG++ ++ F E + + +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTK---DQDVRLGDFGLAKTLKADDLASSVVGTPNYMC 175
A+ YLHS + HRD+K N+ T + ++L DFG AK + + ++ TP Y+
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA-FDMA---GLISKINRSSI---GPLP 228
PE+L Y D+WSLG MY + P F + +A G+ ++I P
Sbjct: 188 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 247
Query: 229 SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S S +K LI+ +L+ P R + +E + HP++
Sbjct: 248 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 124/312 (39%), Gaps = 41/312 (13%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
I+ + + Y M + + E++ Q+L + +L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHL 142
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY 184
HS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++ + Y
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 185 GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI------------------------N 220
DIWS+GC M EM H+ F D +K+ N
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 221 RSSIGPL--PSCYSPSL---------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
R L P + SL + L+ ML +P R S + L+HP++
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 264 HFVDQYRPTFPP 275
+ D PP
Sbjct: 323 VWYDPAEVEAPP 334
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 37/295 (12%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
+ M++Y+ +E++G G +G + ++ + LK+IRL + E +A +E++L+
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGV-VYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLK 74
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+ HP IV + + C + +V + E D+ +++ + N + ++ + QLL
Sbjct: 75 ELHHPNIVSLIDVIHSERC-LTLVFEFMEK-DLKKVLDE-NKTGLQDSQIKIYLYQLLRG 131
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVGTPNYMCPE- 177
V + H + +LHRDLK N+ + D ++L DFGLA+ VV T Y P+
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDV 190
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAF----------KAFDMAGLISKINRSSIGPL 227
L+ Y DIWS+GC EM +P F K F + G + + L
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL 250
Query: 228 PSCYSPSLKT-------------------LIKGMLRKNPEHRPSASELLKHPFLQ 263
P + + L+ ML +P R SA + + HP+ +
Sbjct: 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 24/262 (9%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ E+ E +GRGAFG RA K +K+I ++E R++ E+ ++RV HP
Sbjct: 10 EIEVEEVVGRGAFGVVCKAKWRA--KDVAIKQI----ESESERKAFIVELRQLSRVNHPN 63
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGA-YFPEEKLCKWFAQLLLAVDYLH 125
IV+ A + VC+V Y EGG + ++ + Y+ W Q V YLH
Sbjct: 64 IVKLYGACLNP---VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 126 S---NYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMCPELLAD 181
S ++HRDLK N+ L V ++ DFG A ++ ++ G+ +M PE+
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEG 178
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAG-----LISKINRSSIGPLPSCYSPSLK 236
Y K D++S G ++E+ R K FD G ++ ++ + PL ++
Sbjct: 179 SNYSEKCDVFSWGIILWEVITRR---KPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIE 235
Query: 237 TLIKGMLRKNPEHRPSASELLK 258
+L+ K+P RPS E++K
Sbjct: 236 SLMTRCWSKDPSQRPSMEEIVK 257
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 24/274 (8%)
Query: 5 MDQYEIMEQI-GRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV- 62
+D Y++ Q+ G G G + + ++ ++K+ LK + + C + A +E+ L R
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 66
Query: 63 QHPYIVE----FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
Q P+IV ++ + + C + IV +GG++ ++ F E + + +
Sbjct: 67 QCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTK---DQDVRLGDFGLAKTLKADDLASSVVGTPNYMC 175
A+ YLHS + HRD+K N+ T + ++L DFG AK + + ++ TP Y+
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA-FDMA---GLISKINRSSI---GPLP 228
PE+L Y D+WSLG MY + P F + +A G+ ++I P
Sbjct: 186 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 245
Query: 229 SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S S +K LI+ +L+ P R + +E + HP++
Sbjct: 246 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 24/274 (8%)
Query: 5 MDQYEIMEQI-GRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV- 62
+D Y++ Q+ G G G + + ++ ++K+ LK + + C + A +E+ L R
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 74
Query: 63 QHPYIVE----FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
Q P+IV ++ + + C + IV +GG++ ++ F E + + +
Sbjct: 75 QCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 133
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTK---DQDVRLGDFGLAKTLKADDLASSVVGTPNYMC 175
A+ YLHS + HRD+K N+ T + ++L DFG AK + + ++ TP Y+
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 193
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA-FDMA---GLISKINRSSI---GPLP 228
PE+L Y D+WSLG MY + P F + +A G+ ++I P
Sbjct: 194 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 253
Query: 229 SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S S +K LI+ +L+ P R + +E + HP++
Sbjct: 254 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 24/274 (8%)
Query: 5 MDQYEIMEQI-GRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV- 62
+D Y++ Q+ G G G + + ++ ++K+ LK + + C + A +E+ L R
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 72
Query: 63 QHPYIVE----FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
Q P+IV ++ + + C + IV +GG++ ++ F E + + +
Sbjct: 73 QCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 131
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTK---DQDVRLGDFGLAKTLKADDLASSVVGTPNYMC 175
A+ YLHS + HRD+K N+ T + ++L DFG AK + + ++ TP Y+
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 191
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA-FDMA---GLISKINRSSI---GPLP 228
PE+L Y D+WSLG MY + P F + +A G+ ++I P
Sbjct: 192 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 251
Query: 229 SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S S +K LI+ +L+ P R + +E + HP++
Sbjct: 252 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 17/217 (7%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+YE + +IG+G FG HR +K LKK+ + + E +A +E+ ++ ++H
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 67 IVEFKEAWVEKGC-------YVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+V E K + +V +CE D+A L+ + E K Q+LL
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSE--IKRVMQMLL 134
Query: 120 -AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-----DLASSVVGTPNY 173
+ Y+H N +LHRD+K +N+ +T+D ++L DFGLA+ + + V T Y
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 174 MCPE-LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA 209
PE LL + YG D+W GC M EM P +
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 231
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 17/219 (7%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +YE + +IG+G FG HR +K LKK+ + + E +A +E+ ++ ++H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 65 PYIVEFKEAWVEKGC-------YVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
+V E K + +V +CE D+A L+ + E K Q+
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSE--IKRVMQM 133
Query: 118 LL-AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-----DLASSVVGTP 171
LL + Y+H N +LHRD+K +N+ +T+D ++L DFGLA+ + + V T
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 172 NYMCPE-LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA 209
Y PE LL + YG D+W GC M EM P +
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 232
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 135/303 (44%), Gaps = 62/303 (20%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEK---KKYVLKKIRLARQTERCRRSAHQEMALIAR 61
M++Y +E+IG G +G V ++A+ + + LKKIRL ++ E + +E++++
Sbjct: 1 MEKYHGLEKIGEGTYG----VVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKE 56
Query: 62 VQHPYIVEFKEAWVEKGCYVCI----------VTGYCEGGDMAELMKKSNGAYFPEEKLC 111
++H IV+ + K V + + CEGG + + KS
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-LESVTAKS----------- 104
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVG 169
+ QLL + Y H VLHRDLK N+ + ++ ++++ DFGLA+ VV
Sbjct: 105 -FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV- 162
Query: 170 TPNYMCPE-LLADIPYGFKSDIWSLGCCMYEMAAHRPAF----------KAFDMAGLISK 218
T Y P+ L+ Y DIWS+GC EM P F + F + G +
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNS 222
Query: 219 INRSSIGPLP------SCYSPS-LKTLIKG-----------MLRKNPEHRPSASELLKHP 260
N ++ LP + Y P ++ +KG ML+ +P R +A + L+H
Sbjct: 223 KNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282
Query: 261 FLQ 263
+ +
Sbjct: 283 YFK 285
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 122/304 (40%), Gaps = 41/304 (13%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
I+ + + Y M + + E++ Q+L + +L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY 184
HS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++ + Y
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 185 GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI------------------------N 220
DIWS+GC M EM H+ F D +K+ N
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 221 RSSIGPL--PSCYSPSL---------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
R L P + SL + L+ ML +P R S + L+HP++
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 264 HFVD 267
+ D
Sbjct: 323 VWYD 326
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 24/274 (8%)
Query: 5 MDQYEIMEQI-GRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV- 62
+D Y++ Q+ G G G + + ++ ++K+ LK + + C + A +E+ L R
Sbjct: 21 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 73
Query: 63 QHPYIVE----FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
Q P+IV ++ + + C + IV +GG++ ++ F E + + +
Sbjct: 74 QCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 132
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTK---DQDVRLGDFGLAKTLKADDLASSVVGTPNYMC 175
A+ YLHS + HRD+K N+ T + ++L DFG AK + + ++ TP Y+
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 192
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA-FDMA---GLISKINRSSI---GPLP 228
PE+L Y D+WSLG MY + P F + +A G+ ++I P
Sbjct: 193 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 252
Query: 229 SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S S +K LI+ +L+ P R + +E + HP++
Sbjct: 253 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 24/274 (8%)
Query: 5 MDQYEIMEQI-GRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV- 62
+D Y++ Q+ G G G + + ++ ++K+ LK + + C + A +E+ L R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 68
Query: 63 QHPYIVE----FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
Q P+IV ++ + + C + IV +GG++ ++ F E + + +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTK---DQDVRLGDFGLAKTLKADDLASSVVGTPNYMC 175
A+ YLHS + HRD+K N+ T + ++L DFG AK + + ++ TP Y+
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA-FDMA---GLISKINRSSI---GPLP 228
PE+L Y D+WSLG MY + P F + +A G+ ++I P
Sbjct: 188 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 247
Query: 229 SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S S +K LI+ +L+ P R + +E + HP++
Sbjct: 248 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 135/303 (44%), Gaps = 62/303 (20%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEK---KKYVLKKIRLARQTERCRRSAHQEMALIAR 61
M++Y +E+IG G +G V ++A+ + + LKKIRL ++ E + +E++++
Sbjct: 1 MEKYHGLEKIGEGTYG----VVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKE 56
Query: 62 VQHPYIVEFKEAWVEKGCYVCI----------VTGYCEGGDMAELMKKSNGAYFPEEKLC 111
++H IV+ + K V + + CEGG + + KS
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-LESVTAKS----------- 104
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVG 169
+ QLL + Y H VLHRDLK N+ + ++ ++++ DFGLA+ VV
Sbjct: 105 -FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV- 162
Query: 170 TPNYMCPE-LLADIPYGFKSDIWSLGCCMYEMAAHRPAF----------KAFDMAGLISK 218
T Y P+ L+ Y DIWS+GC EM P F + F + G +
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNS 222
Query: 219 INRSSIGPLP------SCYSPS-LKTLIKG-----------MLRKNPEHRPSASELLKHP 260
N ++ LP + Y P ++ +KG ML+ +P R +A + L+H
Sbjct: 223 KNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282
Query: 261 FLQ 263
+ +
Sbjct: 283 YFK 285
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 124/312 (39%), Gaps = 41/312 (13%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + +KK+ Q + + A++E+ L+ V H
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
I+ + + Y M + + E++ Q+L + +L
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHL 135
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY 184
HS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++ + Y
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 185 GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI------------------------N 220
DIWS+GC M EM H+ F D +K+ N
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 255
Query: 221 RSSIGPL--PSCYSPSL---------------KTLIKGMLRKNPEHRPSASELLKHPFLQ 263
R L P + SL + L+ ML +P R S + L+HP++
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Query: 264 HFVDQYRPTFPP 275
+ D PP
Sbjct: 316 VWYDPAEVEAPP 327
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 24/274 (8%)
Query: 5 MDQYEIMEQI-GRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV- 62
+D Y++ Q+ G G G + + ++ ++K+ LK + + C + A +E+ L R
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 82
Query: 63 QHPYIVE----FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
Q P+IV ++ + + C + IV +GG++ ++ F E + + +
Sbjct: 83 QCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 141
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTK---DQDVRLGDFGLAKTLKADDLASSVVGTPNYMC 175
A+ YLHS + HRD+K N+ T + ++L DFG AK + + ++ TP Y+
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 201
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA-FDMA---GLISKINRSSI---GPLP 228
PE+L Y D+WSLG MY + P F + +A G+ ++I P
Sbjct: 202 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 261
Query: 229 SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S S +K LI+ +L+ P R + +E + HP++
Sbjct: 262 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 24/274 (8%)
Query: 5 MDQYEIMEQI-GRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV- 62
+D Y++ Q+ G G G + + ++ ++K+ LK + + C + A +E+ L R
Sbjct: 15 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 67
Query: 63 QHPYIVE----FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
Q P+IV ++ + + C + IV +GG++ ++ F E + + +
Sbjct: 68 QCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 126
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTK---DQDVRLGDFGLAKTLKADDLASSVVGTPNYMC 175
A+ YLHS + HRD+K N+ T + ++L DFG AK + + ++ TP Y+
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 186
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA-FDMA---GLISKINRSSI---GPLP 228
PE+L Y D+WSLG MY + P F + +A G+ ++I P
Sbjct: 187 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 246
Query: 229 SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S S +K LI+ +L+ P R + +E + HP++
Sbjct: 247 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 24/262 (9%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ E+ E +GRGAFG RA K +K+I ++E R++ E+ ++RV HP
Sbjct: 9 EIEVEEVVGRGAFGVVCKAKWRA--KDVAIKQI----ESESERKAFIVELRQLSRVNHPN 62
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGA-YFPEEKLCKWFAQLLLAVDYLH 125
IV+ A + VC+V Y EGG + ++ + Y+ W Q V YLH
Sbjct: 63 IVKLYGACLNP---VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 126 S---NYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMCPELLAD 181
S ++HRDLK N+ L V ++ DFG A ++ ++ G+ +M PE+
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEG 177
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAG-----LISKINRSSIGPLPSCYSPSLK 236
Y K D++S G ++E+ R K FD G ++ ++ + PL ++
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRR---KPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIE 234
Query: 237 TLIKGMLRKNPEHRPSASELLK 258
+L+ K+P RPS E++K
Sbjct: 235 SLMTRCWSKDPSQRPSMEEIVK 256
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 120/263 (45%), Gaps = 27/263 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR--LARQTE---RCRRSAHQEMALIA 60
D+YE+ E +G G L + + +K +R LAR R RR A AL
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-- 69
Query: 61 RVQHPYIVEF---KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
HP IV EA G IV Y +G + +++ + G P+ + + A
Sbjct: 70 --NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAI-EVIADA 125
Query: 118 LLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS-----SVVGTPN 172
A+++ H N ++HRD+K +NI ++ V++ DFG+A+ + AD S +V+GT
Sbjct: 126 CQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAI-ADSGNSVXQTAAVIGTAQ 184
Query: 173 YMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLP---- 228
Y+ PE +SD++SLGC +YE+ P F + + R P+P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSAR 242
Query: 229 -SCYSPSLKTLIKGMLRKNPEHR 250
S L ++ L KNPE+R
Sbjct: 243 HEGLSADLDAVVLKALAKNPENR 265
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 135/303 (44%), Gaps = 62/303 (20%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEK---KKYVLKKIRLARQTERCRRSAHQEMALIAR 61
M++Y +E+IG G +G V ++A+ + + LKKIRL ++ E + +E++++
Sbjct: 1 MEKYHGLEKIGEGTYG----VVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKE 56
Query: 62 VQHPYIVEFKEAWVEKGCYVCI----------VTGYCEGGDMAELMKKSNGAYFPEEKLC 111
++H IV+ + K V + + CEGG + + KS
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-LESVTAKS----------- 104
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK--ADDLASSVVG 169
+ QLL + Y H VLHRDLK N+ + ++ ++++ DFGLA+ +V
Sbjct: 105 -FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV- 162
Query: 170 TPNYMCPE-LLADIPYGFKSDIWSLGCCMYEMAAHRPAF----------KAFDMAGLISK 218
T Y P+ L+ Y DIWS+GC EM P F + F + G +
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNS 222
Query: 219 INRSSIGPLP------SCYSPS-LKTLIKG-----------MLRKNPEHRPSASELLKHP 260
N ++ LP + Y P ++ +KG ML+ +P R +A + L+H
Sbjct: 223 KNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282
Query: 261 FLQ 263
+ +
Sbjct: 283 YFK 285
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 5 MDQYEIMEQI-GRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV- 62
+D Y++ Q+ G G G + + ++ ++K+ LK + + C + A +E+ L R
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 66
Query: 63 QHPYIVE----FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
Q P+IV ++ + + C + IV +GG++ ++ F E + + +
Sbjct: 67 QCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTK---DQDVRLGDFGLAKTLKADDLASSVVGTPNYMC 175
A+ YLHS + HRD+K N+ T + ++L DFG AK + + + TP Y+
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA-FDMA---GLISKINRSSI---GPLP 228
PE+L Y D+WSLG MY + P F + +A G+ ++I P
Sbjct: 186 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 245
Query: 229 SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S S +K LI+ +L+ P R + +E + HP++
Sbjct: 246 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 120/263 (45%), Gaps = 27/263 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR--LARQTE---RCRRSAHQEMALIA 60
D+YE+ E +G G L + + +K +R LAR R RR A AL
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-- 69
Query: 61 RVQHPYIVEF---KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
HP IV EA G IV Y +G + +++ + G P+ + + A
Sbjct: 70 --NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAI-EVIADA 125
Query: 118 LLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS-----SVVGTPN 172
A+++ H N ++HRD+K +NI ++ V++ DFG+A+ + AD S +V+GT
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTAQ 184
Query: 173 YMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLP---- 228
Y+ PE +SD++SLGC +YE+ P F + + R P+P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSAR 242
Query: 229 -SCYSPSLKTLIKGMLRKNPEHR 250
S L ++ L KNPE+R
Sbjct: 243 HEGLSADLDAVVLKALAKNPENR 265
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 51/317 (16%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + +KK+ Q + + A++E+ L+ V H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V +V + ++ ++++ E++ Q+L
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 175
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 235
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI-------------------- 219
+ Y DIWS+GC M EM H+ F D +K+
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295
Query: 220 ----NRSSIGPL--PSCYSPSL---------------KTLIKGMLRKNPEHRPSASELLK 258
NR L P + SL + L+ ML +P R S + L+
Sbjct: 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355
Query: 259 HPFLQHFVDQYRPTFPP 275
HP++ + D PP
Sbjct: 356 HPYINVWYDPAEVEAPP 372
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 27/263 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR--LARQTE---RCRRSAHQEMALIA 60
D+YE+ E +G G L + + +K +R LAR R RR A AL
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-- 69
Query: 61 RVQHPYIV---EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
HP IV + EA G IV Y +G + +++ + G P+ + + A
Sbjct: 70 --NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAI-EVIADA 125
Query: 118 LLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS-----SVVGTPN 172
A+++ H N ++HRD+K +NI ++ V++ DFG+A+ + AD S +V+GT
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTAQ 184
Query: 173 YMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLP---- 228
Y+ PE +SD++SLGC +YE+ P F + + R P+P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRED--PIPPSAR 242
Query: 229 -SCYSPSLKTLIKGMLRKNPEHR 250
S L ++ L KNPE+R
Sbjct: 243 HEGLSADLDAVVLKALAKNPENR 265
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 116/250 (46%), Gaps = 11/250 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V +V + ++ ++++ E++ Q+L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 137
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y DIWS+GC M EM H+ F D +K+ P P + L+ +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE-FMKKLQPTV 256
Query: 240 KGMLRKNPEH 249
+ + P++
Sbjct: 257 RNYVENRPKY 266
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 120/258 (46%), Gaps = 11/258 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G ++ +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V IV + ++ ++++ E++ Q+L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 137
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + V T Y PE++
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVI 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y DIWS+GC M EM H+ F D +K+ P P+ + L+ +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPA-FMKKLQPTV 256
Query: 240 KGMLRKNPEHRPSASELL 257
+ + P++ + E L
Sbjct: 257 RNYVENRPKYAGYSFEKL 274
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 51/317 (16%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + +KK+ Q + + A++E+ L+ V H
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V +V + ++ ++++ E++ Q+L
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 136
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 137 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 196
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI-------------------- 219
+ Y DIWS+GC M EM H+ F D +K+
Sbjct: 197 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 256
Query: 220 ----NRSSIGPL--PSCYSPSL---------------KTLIKGMLRKNPEHRPSASELLK 258
NR L P + SL + L+ ML +P R S + L+
Sbjct: 257 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 316
Query: 259 HPFLQHFVDQYRPTFPP 275
HP++ + D PP
Sbjct: 317 HPYINVWYDPAEVEAPP 333
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 51/317 (16%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V +V + ++ ++++ E++ Q+L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 137
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI-------------------- 219
+ Y DIWS+GC M EM H+ F D +K+
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 220 ----NRSSIGPL--PSCYSPSL---------------KTLIKGMLRKNPEHRPSASELLK 258
NR L P + SL + L+ ML +P R S + L+
Sbjct: 258 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 317
Query: 259 HPFLQHFVDQYRPTFPP 275
HP++ + D PP
Sbjct: 318 HPYINVWYDPAEVEAPP 334
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 51/317 (16%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + +KK+ Q + + A++E+ L+ V H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V +V + ++ ++++ E++ Q+L
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 138
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI-------------------- 219
+ Y DIWS+GC M EM H+ F D +K+
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 258
Query: 220 ----NRSSIGPL--PSCYSPSL---------------KTLIKGMLRKNPEHRPSASELLK 258
NR L P + SL + L+ ML +P R S + L+
Sbjct: 259 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 318
Query: 259 HPFLQHFVDQYRPTFPP 275
HP++ + D PP
Sbjct: 319 HPYINVWYDPAEVEAPP 335
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 51/317 (16%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V +V + ++ ++++ E++ Q+L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 137
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI-------------------- 219
+ Y DIWS+GC M EM H+ F D +K+
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 257
Query: 220 ----NRSSIGPL--PSCYSPSL---------------KTLIKGMLRKNPEHRPSASELLK 258
NR L P + SL + L+ ML +P R S + L+
Sbjct: 258 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 317
Query: 259 HPFLQHFVDQYRPTFPP 275
HP++ + D PP
Sbjct: 318 HPYINVWYDPAEVEAPP 334
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 51/317 (16%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + +KK+ Q + + A++E+ L+ V H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V +V + ++ ++++ E++ Q+L
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 138
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI-------------------- 219
+ Y DIWS+GC M EM H+ F D +K+
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 258
Query: 220 ----NRSSIGPL--PSCYSPSL---------------KTLIKGMLRKNPEHRPSASELLK 258
NR L P + SL + L+ ML +P R S + L+
Sbjct: 259 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 318
Query: 259 HPFLQHFVDQYRPTFPP 275
HP++ + D PP
Sbjct: 319 HPYINVWYDPAEVEAPP 335
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 119/263 (45%), Gaps = 27/263 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR--LARQTE---RCRRSAHQEMALIA 60
D+YE+ E +G G L + +K +R LAR R RR A AL
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-- 69
Query: 61 RVQHPYIVEF---KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
HP IV EA G IV Y +G + +++ + G P+ + + A
Sbjct: 70 --NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAI-EVIADA 125
Query: 118 LLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS-----SVVGTPN 172
A+++ H N ++HRD+K +NI ++ V++ DFG+A+ + AD S +V+GT
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTAQ 184
Query: 173 YMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLP---- 228
Y+ PE +SD++SLGC +YE+ P F + + R P+P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSAR 242
Query: 229 -SCYSPSLKTLIKGMLRKNPEHR 250
S L ++ L KNPE+R
Sbjct: 243 HEGLSADLDAVVLKALAKNPENR 265
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 51/317 (16%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + +KK+ Q + + A++E+ L+ V H
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V +V + ++ ++++ E++ Q+L
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 175
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 235
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI-------------------- 219
+ Y DIWS+GC M EM H+ F D +K+
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295
Query: 220 ----NRSSIGPL--PSCYSPSL---------------KTLIKGMLRKNPEHRPSASELLK 258
NR L P + SL + L+ ML +P R S + L+
Sbjct: 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355
Query: 259 HPFLQHFVDQYRPTFPP 275
HP++ + D PP
Sbjct: 356 HPYINVWYDPAEVEAPP 372
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 120/258 (46%), Gaps = 11/258 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G ++ +KK+ Q + + A++E+ L+ V H
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V IV + ++ ++++ E++ Q+L
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 142
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 202
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y D+WS+GC M EM H+ F D +K+ P P + L+ +
Sbjct: 203 LGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPE-FMKKLQPTV 261
Query: 240 KGMLRKNPEHRPSASELL 257
+ + P++ + E L
Sbjct: 262 RTYVENRPKYAGYSFEKL 279
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 19/275 (6%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
E + D E + ++GRGA+G H + +K+IR ++ +R
Sbjct: 29 FEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXR 88
Query: 61 RVQHPYIVEFKEAWVEKG-CYVCIVTGYCEGGDMAELMKK--SNGAYFPEEKLCKWFAQL 117
V P+ V F A +G ++C + + K+ G PE+ L K +
Sbjct: 89 TVDCPFTVTFYGALFREGDVWIC---XELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 145
Query: 118 LLAVDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV-VGTPNYMC 175
+ A+++LHS V+HRD+K SN+ + V+ DFG++ L DD+A + G Y
Sbjct: 146 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL-VDDVAKDIDAGCKPYXA 204
Query: 176 PEL----LADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSC- 230
PE L Y KSDIWSLG E+A R + ++ ++ + P P
Sbjct: 205 PERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTP--FQQLKQVVEEPSPQLP 262
Query: 231 ---YSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
+S L+KN + RP+ EL +HPF
Sbjct: 263 ADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 19/206 (9%)
Query: 12 EQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
E +G+G FG AI V HR + V+K+ L R E +R+ +E+ ++ ++HP +++F
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKE--LIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
+ K + +T Y +GG + ++K + Y P + + + + YLHS ++H
Sbjct: 74 GV-LYKDKRLNFITEYIKGGTLRGIIKSMDSQY-PWSQRVSFAKDIASGMAYLHSMNIIH 131
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLA-------------KTLKADDLAS--SVVGTPNYMCP 176
RDL N + ++++V + DFGLA ++LK D +VVG P +M P
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 177 ELLADIPYGFKSDIWSLGCCMYEMAA 202
E++ Y K D++S G + E+
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEIIG 217
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 33/269 (12%)
Query: 13 QIGRGAFGAAILVNHRAEKKKY----VLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
+IG G+FG K K+ +K +++ T ++ E+A++ + +H I+
Sbjct: 43 RIGSGSFGTVY-------KGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL 95
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
F + + IVT +CEG + + + F +L Q +DYLH+
Sbjct: 96 LFMGYMTKDN--LAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKN 152
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVV----GTPNYMCPELLA---D 181
++HRD+K +NIFL + V++GDFGLA T+K+ S V G+ +M PE++ +
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLA-TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 182 IPYGFKSDIWSLGCCMYE-MAAHRPAFKAFDMAGLISKINRSSIGP-LPSCYS---PSLK 236
P+ F+SD++S G +YE M P + +I + R P L Y ++K
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMK 271
Query: 237 TLIKGMLRKNPEHRP------SASELLKH 259
L+ ++K E RP S+ ELL+H
Sbjct: 272 RLVADCVKKVKEERPLFPQILSSIELLQH 300
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 51/317 (16%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + +KK+ Q + + A++E+ L+ V H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V +V + ++ ++++ E++ Q+L
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 131
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI-------------------- 219
+ Y DIWS+GC M EM H+ F D +K+
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 251
Query: 220 ----NRSSIGPL--PSCYSPSL---------------KTLIKGMLRKNPEHRPSASELLK 258
NR L P + SL + L+ ML +P R S + L+
Sbjct: 252 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 311
Query: 259 HPFLQHFVDQYRPTFPP 275
HP++ + D PP
Sbjct: 312 HPYINVWYDPAEVEAPP 328
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 119/263 (45%), Gaps = 27/263 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR--LARQTE---RCRRSAHQEMALIA 60
D+YE+ E +G G L + +K +R LAR R RR A AL
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-- 69
Query: 61 RVQHPYIVEF---KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
HP IV EA G IV Y +G + +++ + G P+ + + A
Sbjct: 70 --NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAI-EVIADA 125
Query: 118 LLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS-----SVVGTPN 172
A+++ H N ++HRD+K +NI ++ V++ DFG+A+ + AD S +V+GT
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTAQ 184
Query: 173 YMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLP---- 228
Y+ PE +SD++SLGC +YE+ P F + + R P+P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSAR 242
Query: 229 -SCYSPSLKTLIKGMLRKNPEHR 250
S L ++ L KNPE+R
Sbjct: 243 HEGLSADLDAVVLKALAKNPENR 265
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 51/317 (16%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + +KK+ Q + + A++E+ L+ V H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V +V + ++ ++++ E++ Q+L
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 131
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI-------------------- 219
+ Y DIWS+GC M EM H+ F D +K+
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 251
Query: 220 ----NRSSIGPL--PSCYSPSL---------------KTLIKGMLRKNPEHRPSASELLK 258
NR L P + SL + L+ ML +P R S + L+
Sbjct: 252 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 311
Query: 259 HPFLQHFVDQYRPTFPP 275
HP++ + D PP
Sbjct: 312 HPYINVWYDPAEVEAPP 328
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 51/317 (16%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + +KK+ Q + + A++E+ L+ V H
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V +V + ++ ++++ E++ Q+L
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 130
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 190
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI-------------------- 219
+ Y DIWS+GC M EM H+ F D +K+
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250
Query: 220 ----NRSSIGPL--PSCYSPSL---------------KTLIKGMLRKNPEHRPSASELLK 258
NR L P + SL + L+ ML +P R S + L+
Sbjct: 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310
Query: 259 HPFLQHFVDQYRPTFPP 275
HP++ + D PP
Sbjct: 311 HPYINVWYDPAEVEAPP 327
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 120/258 (46%), Gaps = 11/258 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G ++ +KK+ Q + + A++E+ L+ V H
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V IV + ++ ++++ E++ Q+L
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 131
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 191
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y D+WS+GC M EM H+ F D +K+ P P + L+ +
Sbjct: 192 LGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPE-FMKKLQPTV 250
Query: 240 KGMLRKNPEHRPSASELL 257
+ + P++ + E L
Sbjct: 251 RTYVENRPKYAGYSFEKL 268
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 15/255 (5%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G ++ +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V IV + +++++++ E++ Q+L+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQME----LDHERMSYLLYQMLV 137
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y DIWS+GC M EM F D +K+ P SP +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP-----SPEFMKKL 252
Query: 240 KGMLRKNPEHRPSAS 254
+ +R E+RP +
Sbjct: 253 QPTVRTYVENRPKYA 267
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 28/276 (10%)
Query: 5 MDQYEIMEQI-GRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV- 62
+D Y++ Q+ G G G + + ++ ++K+ LK + + C + A +E+ L R
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXL------QDCPK-ARREVELHWRAS 112
Query: 63 QHPYIVE----FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
Q P+IV ++ + + C + IV +GG++ ++ F E + + +
Sbjct: 113 QCPHIVRIVDVYENLYAGRKC-LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIG 171
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTK---DQDVRLGDFGLAKTLKADDLASSVVGTPNYMC 175
A+ YLHS + HRD+K N+ T + ++L DFG AK + + ++ TP Y+
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGL-ISKINRSSI--------GP 226
PE+L Y D WSLG Y + P F + GL IS ++ I P
Sbjct: 232 PEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF--YSNHGLAISPGXKTRIRXGQYEFPNP 289
Query: 227 LPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S S +K LI+ +L+ P R + +E HP++
Sbjct: 290 EWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWI 325
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
+E+ E++G G FG + H+ ++ +K+ R + + R E+ ++ ++ HP +
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR-QELSPKNRERWCLEIQIMKKLNHPNV 75
Query: 68 VEFKEAWVEKGCYVC-------IVTGYCEGGDMAELMKK-SNGAYFPEEKLCKWFAQLLL 119
V +E V G + YCEGGD+ + + + N E + + +
Sbjct: 76 VSARE--VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 120 AVDYLHSNYVLHRDLKCSNIFLT---KDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCP 176
A+ YLH N ++HRDLK NI L + ++ D G AK L +L + VGT Y+ P
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 177 ELLADIPYGFKSDIWSLGCCMYE-MAAHRPAF 207
ELL Y D WS G +E + RP
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 225
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 65 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 121
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 64 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
+E+ E++G G FG + H+ ++ +K+ R + + R E+ ++ ++ HP +
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR-QELSPKNRERWCLEIQIMKKLNHPNV 74
Query: 68 VEFKEAWVEKGCYVC-------IVTGYCEGGDMAELMKK-SNGAYFPEEKLCKWFAQLLL 119
V +E V G + YCEGGD+ + + + N E + + +
Sbjct: 75 VSARE--VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 120 AVDYLHSNYVLHRDLKCSNIFLT---KDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCP 176
A+ YLH N ++HRDLK NI L + ++ D G AK L +L + VGT Y+ P
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 177 ELLADIPYGFKSDIWSLGCCMYE-MAAHRPAF 207
ELL Y D WS G +E + RP
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 224
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 15/255 (5%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G + ++ +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V IV + +++++++ E++ Q+L+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQME----LDHERMSYLLYQMLV 137
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y DIWS+G M EM F D +K+ P SP +
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP-----SPEFMKKL 252
Query: 240 KGMLRKNPEHRPSAS 254
+ +R E+RP +
Sbjct: 253 QPTVRTYVENRPKYA 267
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 124/274 (45%), Gaps = 39/274 (14%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQ-HPYIVEF-- 70
+ G F ++Y LK RL E R+ QE+ + ++ HP IV+F
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALK--RLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 71 -----KEAWVEKGCYVCIVTGYCEGGDMAELMKK--SNGAYFPEEKLCKWFAQLLLAVDY 123
KE ++T C+G + E +KK S G + + K F Q AV +
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKG-QLVEFLKKMESRGP-LSCDTVLKIFYQTCRAVQH 151
Query: 124 LHSNY--VLHRDLKCSNIFLTKDQDVRLGDFGLAKT---------------LKADDLASS 166
+H ++HRDLK N+ L+ ++L DFG A T L +++ +
Sbjct: 152 MHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211
Query: 167 VVGTPNYMCPE---LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSS 223
TP Y PE L ++ P G K DIW+LGC +Y + + F+ D A L + S
Sbjct: 212 T--TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE--DGAKLRIVNGKYS 267
Query: 224 IGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELL 257
I P + Y+ +LI+ ML+ NPE R S +E++
Sbjct: 268 IPPHDTQYT-VFHSLIRAMLQVNPEERLSIAEVV 300
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 15/255 (5%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G ++ +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V IV + +++++++ E++ Q+L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQME----LDHERMSYLLYQMLC 137
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y DIWS+GC M EM F D +K+ P SP +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP-----SPEFMKKL 252
Query: 240 KGMLRKNPEHRPSAS 254
+ +R E+RP +
Sbjct: 253 QPTVRTYVENRPKYA 267
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 19/263 (7%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
Q + ++IG G+FG V +K + + T + ++ E+ ++ + +H
Sbjct: 36 QITVGQRIGSGSFGT---VYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 92
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ F + IVT +CEG + + F KL Q +DYLH+
Sbjct: 93 ILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA 149
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS----SVVGTPNYMCPELLA-- 180
++HRDLK +NIFL +D V++GDFGLA T+K+ S + G+ +M PE++
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 181 -DIPYGFKSDIWSLGCCMYE-MAAHRPAFKAFDMAGLISKINRSSIGP----LPSCYSPS 234
PY F+SD+++ G +YE M P + +I + R + P + S +
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 268
Query: 235 LKTLIKGMLRKNPEHRPSASELL 257
+K L+ L+K + RP ++L
Sbjct: 269 MKRLMAECLKKKRDERPLFPQIL 291
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 11/258 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G ++ +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V IV + ++ ++++ E++ Q+L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 137
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + V T Y PE++
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVI 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y D+WS+GC M EM H+ F D +K+ P P + L+ +
Sbjct: 198 LGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPE-FMKKLQPTV 256
Query: 240 KGMLRKNPEHRPSASELL 257
+ + P++ + E L
Sbjct: 257 RTYVENRPKYAGYSFEKL 274
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 125/298 (41%), Gaps = 44/298 (14%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+D+Y + ++G G +G + +K+IRL + E +A +E++L+ +QH
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWF-AQLLLAVDY 123
I+E K + + ++ Y E D+ + M K+ ++ K F QL+ V++
Sbjct: 93 RNIIELKSV-IHHNHRLHLIFEYAE-NDLKKYMDKNPDV---SMRVIKSFLYQLINGVNF 147
Query: 124 LHSNYVLHRDLKCSNIFLTKDQD-----VRLGDFGLAKTLK--ADDLASSVVGTPNYMCP 176
HS LHRDLK N+ L+ +++GDFGLA+ ++ T Y P
Sbjct: 148 CHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPP 206
Query: 177 E-LLADIPYGFKSDIWSLGCCMYEMAAHRP----------AFKAFDMAGLISKINRSSIG 225
E LL Y DIWS+ C EM P FK F++ GL +
Sbjct: 207 EILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266
Query: 226 PLPSC-------YSPSLKTLI------------KGMLRKNPEHRPSASELLKHPFLQH 264
LP +LK ++ ML +P R SA L+HP+ H
Sbjct: 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSH 324
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 19/263 (7%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
Q + ++IG G+FG V +K + + T + ++ E+ ++ + +H
Sbjct: 37 QITVGQRIGSGSFGT---VYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 93
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ F + IVT +CEG + + F KL Q +DYLH+
Sbjct: 94 ILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA 150
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS----SVVGTPNYMCPELLA-- 180
++HRDLK +NIFL +D V++GDFGLA T+K+ S + G+ +M PE++
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 181 -DIPYGFKSDIWSLGCCMYE-MAAHRPAFKAFDMAGLISKINRSSIGP----LPSCYSPS 234
PY F+SD+++ G +YE M P + +I + R + P + S +
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 269
Query: 235 LKTLIKGMLRKNPEHRPSASELL 257
+K L+ L+K + RP ++L
Sbjct: 270 MKRLMAECLKKKRDERPLFPQIL 292
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 105/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + A + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINAMLNH 64
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 65 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 121
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 19/263 (7%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
Q + ++IG G+FG V +K + + T + ++ E+ ++ + +H
Sbjct: 9 QITVGQRIGSGSFGT---VYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ F + IVT +CEG + + F KL Q +DYLH+
Sbjct: 66 ILLFMG--YSTAPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA 122
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS----SVVGTPNYMCPELLA-- 180
++HRDLK +NIFL +D V++GDFGLA T+K+ S + G+ +M PE++
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 181 -DIPYGFKSDIWSLGCCMYE-MAAHRPAFKAFDMAGLISKINRSSIGP----LPSCYSPS 234
PY F+SD+++ G +YE M P + +I + R + P + S +
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241
Query: 235 LKTLIKGMLRKNPEHRPSASELL 257
+K L+ L+K + RP ++L
Sbjct: 242 MKRLMAECLKKKRDERPLFPQIL 264
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 64 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 19/263 (7%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
Q + ++IG G+FG V +K + + T + ++ E+ ++ + +H
Sbjct: 14 QITVGQRIGSGSFGT---VYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 70
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ F + IVT +CEG + + F KL Q +DYLH+
Sbjct: 71 ILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA 127
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS----SVVGTPNYMCPELLA-- 180
++HRDLK +NIFL +D V++GDFGLA T+K+ S + G+ +M PE++
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 181 -DIPYGFKSDIWSLGCCMYE-MAAHRPAFKAFDMAGLISKINRSSIGP----LPSCYSPS 234
PY F+SD+++ G +YE M P + +I + R + P + S +
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 246
Query: 235 LKTLIKGMLRKNPEHRPSASELL 257
+K L+ L+K + RP ++L
Sbjct: 247 MKRLMAECLKKKRDERPLFPQIL 269
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 64 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 19/263 (7%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
Q + ++IG G+FG V +K + + T + ++ E+ ++ + +H
Sbjct: 14 QITVGQRIGSGSFGT---VYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 70
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ F + IVT +CEG + + F KL Q +DYLH+
Sbjct: 71 ILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA 127
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS----SVVGTPNYMCPELLA-- 180
++HRDLK +NIFL +D V++GDFGLA T+K+ S + G+ +M PE++
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 181 -DIPYGFKSDIWSLGCCMYE-MAAHRPAFKAFDMAGLISKINRSSIGP----LPSCYSPS 234
PY F+SD+++ G +YE M P + +I + R + P + S +
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 246
Query: 235 LKTLIKGMLRKNPEHRPSASELL 257
+K L+ L+K + RP ++L
Sbjct: 247 MKRLMAECLKKKRDERPLFPQIL 269
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 65 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 121
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 65 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 121
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 65 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 121
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 64 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 64 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNH 64
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 65 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 121
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 19/263 (7%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
Q + ++IG G+FG V +K + + T + ++ E+ ++ + +H
Sbjct: 11 QITVGQRIGSGSFGT---VYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 67
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ F + IVT +CEG + + F KL Q +DYLH+
Sbjct: 68 ILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA 124
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS----SVVGTPNYMCPELLA-- 180
++HRDLK +NIFL +D V++GDFGLA T+K+ S + G+ +M PE++
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 181 -DIPYGFKSDIWSLGCCMYE-MAAHRPAFKAFDMAGLISKINRSSIGP----LPSCYSPS 234
PY F+SD+++ G +YE M P + +I + R + P + S +
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 243
Query: 235 LKTLIKGMLRKNPEHRPSASELL 257
+K L+ L+K + RP ++L
Sbjct: 244 MKRLMAECLKKKRDERPLFPQIL 266
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 15/255 (5%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G ++ +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V IV + +++++++ E++ Q+L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQME----LDHERMSYLLYQMLC 137
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y DIWS+GC M EM F D +K+ P SP +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP-----SPEFMKKL 252
Query: 240 KGMLRKNPEHRPSAS 254
+ +R E+RP +
Sbjct: 253 QPTVRTYVENRPKYA 267
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 62
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 63 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 119
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 120 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLA 201
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 17/262 (6%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
Q + ++IG G+FG V +K + + T + ++ E+ ++ + +H
Sbjct: 37 QITVGQRIGSGSFGT---VYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 93
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ F + IVT +CEG + + F KL Q +DYLH+
Sbjct: 94 ILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHA 150
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLA---KTLKADDLASSVVGTPNYMCPELLA--- 180
++HRDLK +NIFL +D V++GDFGLA + G+ +M PE++
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 181 DIPYGFKSDIWSLGCCMYE-MAAHRPAFKAFDMAGLISKINRSSIGP----LPSCYSPSL 235
PY F+SD+++ G +YE M P + +I + R + P + S ++
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 270
Query: 236 KTLIKGMLRKNPEHRPSASELL 257
K L+ L+K + RP ++L
Sbjct: 271 KRLMAECLKKKRDERPLFPQIL 292
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 64 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 17/262 (6%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
Q + ++IG G+FG V +K + + T + ++ E+ ++ + +H
Sbjct: 29 QITVGQRIGSGSFGT---VYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 85
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ F + IVT +CEG + + F KL Q +DYLH+
Sbjct: 86 ILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA 142
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLA---KTLKADDLASSVVGTPNYMCPELLA--- 180
++HRDLK +NIFL +D V++GDFGLA + G+ +M PE++
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 181 DIPYGFKSDIWSLGCCMYE-MAAHRPAFKAFDMAGLISKINRSSIGP----LPSCYSPSL 235
PY F+SD+++ G +YE M P + +I + R + P + S ++
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 262
Query: 236 KTLIKGMLRKNPEHRPSASELL 257
K L+ L+K + RP ++L
Sbjct: 263 KRLMAECLKKKRDERPLFPQIL 284
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 19/263 (7%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
Q + ++IG G+FG V +K + + T + ++ E+ ++ + +H
Sbjct: 9 QITVGQRIGSGSFGT---VYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ F + IVT +CEG + + F KL Q +DYLH+
Sbjct: 66 ILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA 122
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLAS----SVVGTPNYMCPELLA-- 180
++HRDLK +NIFL +D V++GDFGLA T+K+ S + G+ +M PE++
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLA-TVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 181 -DIPYGFKSDIWSLGCCMYE-MAAHRPAFKAFDMAGLISKINRSSIGP----LPSCYSPS 234
PY F+SD+++ G +YE M P + +I + R + P + S +
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241
Query: 235 LKTLIKGMLRKNPEHRPSASELL 257
+K L+ L+K + RP ++L
Sbjct: 242 MKRLMAECLKKKRDERPLFPQIL 264
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 132/277 (47%), Gaps = 15/277 (5%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTER--CRRSAHQEMALIAR 61
+D +EI +G+G FG L R +K +++ K+ Q E+ +E+ + A
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLA--REKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAH 79
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
+ HP I+ + ++ + ++ Y G++ + ++KS F E++ +L A+
Sbjct: 80 LHHPNILRLYNYFYDRR-RIYLILEYAPRGELYKELQKS--CTFDEQRTATIMEELADAL 136
Query: 122 DYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTPNYMCPELLA 180
Y H V+HRD+K N+ L ++++ DFG ++ A L ++ GT +Y+ PE++
Sbjct: 137 MYCHGKKVIHRDIKPENLLLGLKGELKIADFGW--SVHAPSLRRKTMCGTLDYLPPEMIE 194
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+W +G YE+ P F++ +I + + P+ + LI
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDL-KFPASVPTGAQDLIS 253
Query: 241 GMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPAA 277
+LR NP R +++ HP+++ R PP+A
Sbjct: 254 KLLRHNPSERLPLAQVSAHPWVR---ANSRRVLPPSA 287
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 64 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 65 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 121
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 24/279 (8%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR 61
++ ++ E + ++G G G + R +K++R + E +R ++
Sbjct: 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKS 80
Query: 62 VQHPYIVE-FKEAWVEKGCYVCI-VTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
PYIV+ F ++ + + G C AE +KK PE L K ++
Sbjct: 81 HDCPYIVQCFGTFITNTDVFIAMELMGTC-----AEKLKKRMQGPIPERILGKMTVAIVK 135
Query: 120 AVDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPEL 178
A+ YL + V+HRD+K SNI L + ++L DFG++ L D G YM PE
Sbjct: 136 ALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPER 195
Query: 179 LADIP------YGFKSDIWSLGCCMYEMAAHRPAFKA----FDMAGLISKINRSSIGPLP 228
+ D P Y ++D+WSLG + E+A + +K F+ +++K+ + LP
Sbjct: 196 I-DPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE---VLTKVLQEEPPLLP 251
Query: 229 S--CYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHF 265
+S ++ +K L K+ RP ++LL+H F++ +
Sbjct: 252 GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKXQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 64 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 64 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 64 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 64 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 15/255 (5%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G ++ +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V IV + +++++++ E++ Q+L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQME----LDHERMSYLLYQMLC 137
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y DIWS+GC M EM F D +K+ P SP +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP-----SPEFMKKL 252
Query: 240 KGMLRKNPEHRPSAS 254
+ +R E+RP +
Sbjct: 253 QPTVRTYVENRPKYA 267
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 117/255 (45%), Gaps = 15/255 (5%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G ++ +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V IV + +++++++ E++ Q+L+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQME----LDHERMSYLLYQMLV 137
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y DIWS+G M EM F D +K+ P SP +
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP-----SPEFMKKL 252
Query: 240 KGMLRKNPEHRPSAS 254
+ +R E+RP +
Sbjct: 253 QPTVRTYVENRPKYA 267
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA+G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 64
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 65 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 121
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLA 203
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 21/271 (7%)
Query: 6 DQYEIMEQI-GRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
D Y++ +Q+ G G G + HR +K LK L + + R+
Sbjct: 9 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALK---LLYDSPKARQEVDHHWQASGG--- 62
Query: 65 PYIVEFKEAW--VEKGCYVCIVTGYC-EGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
P+IV + + + G ++ C EGG++ +++ F E + + + A+
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 122 DYLHSNYVLHRDLKCSNIFLT---KDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPEL 178
+LHS+ + HRD+K N+ T KD ++L DFG AK + L + TP Y+ PE+
Sbjct: 123 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY-TPYYVAPEV 181
Query: 179 LADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMA----GLISKINRSSIG---PLPSCY 231
L Y D+WSLG MY + P F + G+ +I G P S
Sbjct: 182 LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEV 241
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S K LI+ +L+ +P R + ++ + HP++
Sbjct: 242 SEDAKQLIRLLLKTDPTERLTITQFMNHPWI 272
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 17/262 (6%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
Q + ++IG G+FG V +K + + T + ++ E+ ++ + +H
Sbjct: 9 QITVGQRIGSGSFGT---VYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ F + IVT +CEG + + F KL Q +DYLH+
Sbjct: 66 ILLFMG--YSTKPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYLHA 122
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLA---KTLKADDLASSVVGTPNYMCPELLA--- 180
++HRDLK +NIFL +D V++GDFGLA + G+ +M PE++
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 181 DIPYGFKSDIWSLGCCMYE-MAAHRPAFKAFDMAGLISKINRSSIGP----LPSCYSPSL 235
PY F+SD+++ G +YE M P + +I + R + P + S ++
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 236 KTLIKGMLRKNPEHRPSASELL 257
K L+ L+K + RP ++L
Sbjct: 243 KRLMAECLKKKRDERPLFPQIL 264
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 31/264 (11%)
Query: 10 IMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
+++IG G FG L + K K +K IR +E +E ++ ++ HP +V+
Sbjct: 12 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQ 67
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
+E+ +C+VT + E G +++ ++ G F E L + + YL V
Sbjct: 68 LYGVCLEQAP-ICLVTEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACV 125
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYGF 186
+HRDL N + ++Q +++ DFG+ + + DD +S GT + PE+ + Y
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 187 KSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSS------IGPLPSCYSPSLKT--- 237
KSD+WS G M+E+ + G I NRS+ I Y P L +
Sbjct: 185 KSDVWSFGVLMWEVFSE----------GKIPYENRSNSEVVEDISTGFRLYKPRLASTHV 234
Query: 238 --LIKGMLRKNPEHRPSASELLKH 259
++ R+ PE RP+ S LL+
Sbjct: 235 YQIMNHCWRERPEDRPAFSRLLRQ 258
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + IG GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 200
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 260
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 261 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 21/271 (7%)
Query: 6 DQYEIMEQI-GRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
D Y++ +Q+ G G G + HR +K LK L + + R+
Sbjct: 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALK---LLYDSPKARQEVDHHWQASGG--- 81
Query: 65 PYIVEFKEAW--VEKGCYVCIVTGYC-EGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
P+IV + + + G ++ C EGG++ +++ F E + + + A+
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 122 DYLHSNYVLHRDLKCSNIFLT---KDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPEL 178
+LHS+ + HRD+K N+ T KD ++L DFG AK + L + TP Y+ PE+
Sbjct: 142 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY-TPYYVAPEV 200
Query: 179 LADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMA----GLISKINRSSIG---PLPSCY 231
L Y D+WSLG MY + P F + G+ +I G P S
Sbjct: 201 LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEV 260
Query: 232 SPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S K LI+ +L+ +P R + ++ + HP++
Sbjct: 261 SEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 15/255 (5%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G ++ +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V IV + ++ ++++ E++ Q+L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 137
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y DIWS+GC M EM F D +K+ P SP +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP-----SPEFMKKL 252
Query: 240 KGMLRKNPEHRPSAS 254
+ +R E+RP +
Sbjct: 253 QPTVRTYVENRPKYA 267
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 11/258 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G ++ +KK+ Q + + A++E+ L+ V H
Sbjct: 25 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V IV + ++ ++++ E++ Q+L
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 139
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + V T Y PE++
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVI 199
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y DIWS+GC M EM F D +K+ P P + L+ +
Sbjct: 200 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE-FMKKLQPTV 258
Query: 240 KGMLRKNPEHRPSASELL 257
+ + P++ + E L
Sbjct: 259 RTYVENRPKYAGYSFEKL 276
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 1 MESRMD-QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALI 59
M+SR ++ +E+IG G FG+ R + Y +K+ + ++A +E+
Sbjct: 1 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH 60
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYFPEEKLCKWFAQ 116
A + QH ++V + AW E ++ I YC GG +A+ + ++ +YF E +L Q
Sbjct: 61 AVLGQHSHVVRYFSAWAEDD-HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 119
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTK-----------DQD--------VRLGDFGLAKT 157
+ + Y+HS ++H D+K SNIF+++ D+D ++GD G
Sbjct: 120 VGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 179
Query: 158 LKADDLASSVVGTPNYMCPELLAD----IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMA 213
+ + + G ++ E+L + +P K+DI++L + A P + D
Sbjct: 180 ISSPQVEE---GDSRFLANEVLQENYTHLP---KADIFALALTVVXAAGAEPLPRNGDQW 233
Query: 214 GLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
+I + + +P S L+K M+ +PE RPSA L+KH L
Sbjct: 234 ---HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 279
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 197
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 257
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 258 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 11/258 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G ++ +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V IV + ++ ++++ E++ Q+L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 137
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVI 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y DIWS+GC M EM F D +K+ P P + L+ +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE-FMKKLQPTV 256
Query: 240 KGMLRKNPEHRPSASELL 257
+ + P++ + E L
Sbjct: 257 RTYVENRPKYAGYSFEKL 274
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 11/258 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G ++ +KK+ Q + + A++E+ L+ V H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V IV + ++ ++++ E++ Q+L
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 138
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 198
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y DIWS+GC M EM F D +K+ P P + L+ +
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE-FMKKLQPTV 257
Query: 240 KGMLRKNPEHRPSASELL 257
+ + P++ + E L
Sbjct: 258 RTYVENRPKYAGYSFEKL 275
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 11/258 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G ++ +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 65 PYIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
I+ + +E+ V IV + ++ ++++ E++ Q+L
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME----LDHERMSYLLYQMLC 137
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELL 179
+ +LHS ++HRDLK SNI + D +++ DFGLA+T + + V T Y PE++
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ Y DIWS+GC M EM F D +K+ P P + L+ +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE-FMKKLQPTV 256
Query: 240 KGMLRKNPEHRPSASELL 257
+ + P++ + E L
Sbjct: 257 RTYVENRPKYAGYSFEKL 274
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 143
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 201
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 261
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 262 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 148
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 206
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 266
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 267 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 324
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKXQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 8/202 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++ +++++ +G GA G L +R ++ +K + + R + C + +E+ + + H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNH 63
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+F +G + YC GG++ + ++ G PE ++F QL+ V YL
Sbjct: 64 ENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYL 120
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMCPELLAD 181
H + HRD+K N+ L + ++++ DFGLA + ++ L + + GT Y+ PELL
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 182 IPYGFK-SDIWSLGCCMYEMAA 202
+ + D+WS G + M A
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLA 202
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 200
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 260
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 261 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 126/312 (40%), Gaps = 41/312 (13%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G +KK+ Q + + A++E+ L+ V H
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
I+ + + Y M + + E++ Q+L + +L
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHL 140
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY 184
HS ++HRDLK SNI + D +++ DFGLA+T + + + V T Y PE++ + Y
Sbjct: 141 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGY 200
Query: 185 GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI----------NRSSIGP-------- 226
DIWS+GC M E+ F+ D +K+ +++ P
Sbjct: 201 KENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVEN 260
Query: 227 ------------LPSCYSPS------LKT-----LIKGMLRKNPEHRPSASELLKHPFLQ 263
P PS +KT L+ ML +P+ R S E L+HP++
Sbjct: 261 RPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 320
Query: 264 HFVDQYRPTFPP 275
+ D PP
Sbjct: 321 VWYDPAEAEAPP 332
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 157
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 215
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKINR--- 221
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 275
Query: 222 ----SSIGPLPSC--------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
S+ +P +P L++ ML + + R +A++ L H + + D
Sbjct: 276 RNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKSQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGL + DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 156
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 214
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKINR--- 221
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 274
Query: 222 ----SSIGPLPSC--------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
S+ +P +P L++ ML + + R +A++ L H + + D
Sbjct: 275 RNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 134/315 (42%), Gaps = 54/315 (17%)
Query: 7 QYEIMEQIGRGAFGA---AILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQ 63
+Y + IG+G++G AI RA + ++ K ++ + + E+ L+ ++
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 64 HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELM-------------------------- 97
HP I E + E Y+C+V C GG + + +
Sbjct: 87 HPNIARLYEVY-EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 98 --KKSNGA---------YFPEEKLC-KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLT--K 143
+ NG+ + EKL Q+ A+ YLH+ + HRD+K N + K
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK 205
Query: 144 DQDVRLGDFGLAKTLKADDLA-----SSVVGTPNYMCPELL--ADIPYGFKSDIWSLGCC 196
+++L DFGL+K + ++ GTP ++ PE+L + YG K D WS G
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 197 MYEMAAHRPAFKAFDMAGLISKINRSSI---GPLPSCYSPSLKTLIKGMLRKNPEHRPSA 253
++ + F + A IS++ + P + SP + L+ +L +N + R A
Sbjct: 266 LHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDA 325
Query: 254 SELLKHPFLQHFVDQ 268
L+HP++ F D+
Sbjct: 326 MRALQHPWISQFSDK 340
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKINR--- 221
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 222 ----SSIGPLPSC--------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
S+ +P +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKINR--- 221
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 222 ----SSIGPLPSC--------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
S+ +P +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 137/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K A ++ + Q+L
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVK---CAKLTDDHVQFLIYQILRG 133
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 191
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKINR--- 221
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 251
Query: 222 ----SSIGPLPSC--------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
S+ +P +P L++ ML + + R +A++ L H + + D
Sbjct: 252 RNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 128/314 (40%), Gaps = 66/314 (21%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKI----------RLARQTERCRRSAHQEMA 57
+++ +G GA+G H+ + +KKI R R+ + + H+ +
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 58 LIARVQHPYIVE-FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQ 116
I +Q P E F E ++ + +L + + ++ + + Q
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELM------------QTDLHRVISTQMLSDDHIQYFIYQ 120
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTL---KADDL--------AS 165
L AV LH + V+HRDLK SN+ + + D+++ DFGLA+ + AD+ +
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 166 SVVGTPNYMCPE-LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFD-------MAGLI- 216
V T Y PE +L Y D+WS GC + E+ RP F D + G+I
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240
Query: 217 ------------SKINRSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSA 253
S R I LP +P L++ ML +P R +A
Sbjct: 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITA 300
Query: 254 SELLKHPFLQHFVD 267
E L+HP+LQ + D
Sbjct: 301 KEALEHPYLQTYHD 314
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 402 GSPMRSTRTKAVGTPTQRCNTEASPKVLKPCSVAPGLKSNADTQG--LAPAKLMFDSAKR 459
G+P + + +P R ++ P + P + + + +G L L+FD AKR
Sbjct: 240 GTPHSDNDLRCIESPRAREYIKSLP--MYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKR 297
Query: 460 VQGSNTLKHQLPVIDSSPKTKPRHDGIPPTGPVKHVGEDGLSTKTRQK 507
+ L+H P +P + IPP+ ++ L+TK +K
Sbjct: 298 ITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKK 345
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 147
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 148 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 205
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKINR--- 221
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 206 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 265
Query: 222 ----SSIGPLPSC--------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
S+ +P +P L++ ML + + R +A++ L H + + D
Sbjct: 266 RNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 323
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 128/314 (40%), Gaps = 66/314 (21%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKI----------RLARQTERCRRSAHQEMA 57
+++ +G GA+G H+ + +KKI R R+ + + H+ +
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 58 LIARVQHPYIVE-FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQ 116
I +Q P E F E ++ + +L + + ++ + + Q
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELM------------QTDLHRVISTQMLSDDHIQYFIYQ 120
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTL---KADDL--------AS 165
L AV LH + V+HRDLK SN+ + + D+++ DFGLA+ + AD+ +
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 166 SVVGTPNYMCPE-LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFD-------MAGLI- 216
V T Y PE +L Y D+WS GC + E+ RP F D + G+I
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240
Query: 217 ------------SKINRSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSA 253
S R I LP +P L++ ML +P R +A
Sbjct: 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITA 300
Query: 254 SELLKHPFLQHFVD 267
E L+HP+LQ + D
Sbjct: 301 KEALEHPYLQTYHD 314
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 402 GSPMRSTRTKAVGTPTQRCNTEASPKVLKPCSVAPGLKSNADTQG--LAPAKLMFDSAKR 459
G+P + + +P R ++ P + P + + + +G L L+FD AKR
Sbjct: 240 GTPHSDNDLRCIESPRAREYIKSLP--MYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKR 297
Query: 460 VQGSNTLKHQLPVIDSSPKTKPRHDGIPPTGPVKHVGEDGLSTKTRQK 507
+ L+H P +P + IPP+ ++ L+TK +K
Sbjct: 298 ITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKK 345
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 143
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 201
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKINR--- 221
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 261
Query: 222 ----SSIGPLPSC--------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
S+ +P +P L++ ML + + R +A++ L H + + D
Sbjct: 262 RNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 157
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD V T Y PE++
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGXVATRWYRAPEIML 215
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKINR--- 221
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 275
Query: 222 ----SSIGPLPSC--------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
S+ +P +P L++ ML + + R +A++ L H + + D
Sbjct: 276 RNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 126/314 (40%), Gaps = 66/314 (21%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKI----------RLARQTERCRRSAHQEMA 57
+++ +G GA+G H+ + +KKI R R+ + + H+ +
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 58 LIARVQHPYIVE-FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQ 116
I +Q P E F E ++ + +L + + ++ + + Q
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELM------------QTDLHRVISTQMLSDDHIQYFIYQ 120
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASS---------- 166
L AV LH + V+HRDLK SN+ + + D+++ DFGLA+ + +S
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 167 -VVGTPNYMCPE-LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFD-------MAGLI- 216
V T Y PE +L Y D+WS GC + E+ RP F D + G+I
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240
Query: 217 ------------SKINRSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSA 253
S R I LP +P L++ ML +P R +A
Sbjct: 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITA 300
Query: 254 SELLKHPFLQHFVD 267
E L+HP+LQ + D
Sbjct: 301 KEALEHPYLQTYHD 314
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 402 GSPMRSTRTKAVGTPTQRCNTEASPKVLKPCSVAPGLKSNADTQG--LAPAKLMFDSAKR 459
G+P + + +P R ++ P + P + + + +G L L+FD AKR
Sbjct: 240 GTPHSDNDLRCIESPRAREYIKSLP--MYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKR 297
Query: 460 VQGSNTLKHQLPVIDSSPKTKPRHDGIPPTGPVKHVGEDGLSTKTRQK 507
+ L+H P +P + IPP+ ++ L+TK +K
Sbjct: 298 ITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKK 345
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 157
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 215
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 275
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 276 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 133
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIML 191
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKINR--- 221
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 251
Query: 222 ----SSIGPLPSC--------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
S+ +P +P L++ ML + + R +A++ L H + + D
Sbjct: 252 RNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 133
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 191
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKINR--- 221
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 251
Query: 222 ----SSIGPLPSC--------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
S+ +P +P L++ ML + + R +A++ L H + + D
Sbjct: 252 RNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 156
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 214
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 274
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 275 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 149
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 207
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 267
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 268 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 149
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 207
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 267
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 268 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 123/312 (39%), Gaps = 41/312 (13%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+ +Y+ ++ IG GA G +KK+ Q + + A++E+ L+ V H
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
I+ + + Y M + + E++ Q+L + +L
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHL 142
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPY 184
HS ++HRDLK SNI + D +++ DFGLA+T + + + V T Y PE++ + Y
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGY 202
Query: 185 GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGP------------------ 226
DIWS+GC M E+ F+ D +K+ P
Sbjct: 203 AANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVEN 262
Query: 227 ------------LPSCYSPS------LKT-----LIKGMLRKNPEHRPSASELLKHPFLQ 263
P PS +KT L+ ML +P+ R S E L+HP++
Sbjct: 263 RPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 322
Query: 264 HFVDQYRPTFPP 275
+ D PP
Sbjct: 323 VWYDPAEAEAPP 334
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 197
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 257
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 258 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 143
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 201
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 261
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 262 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 197
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 257
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 258 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 202
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 262
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 263 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 139
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 197
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 257
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 258 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 1 MESRMD-QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALI 59
M+SR ++ +E+IG G FG+ R + Y +K+ + ++A +E+
Sbjct: 3 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH 62
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYFPEEKLCKWFAQ 116
A + QH ++V + AW E ++ I YC GG +A+ + ++ +YF E +L Q
Sbjct: 63 AVLGQHSHVVRYFSAWAEDD-HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 121
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTK-----------DQD--------VRLGDFGLAKT 157
+ + Y+HS ++H D+K SNIF+++ D+D ++GD G
Sbjct: 122 VGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 181
Query: 158 LKADDLASSVVGTPNYMCPELLAD----IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMA 213
+ + + G ++ E+L + +P K+DI++L + A P + D
Sbjct: 182 ISSPQVEE---GDSRFLANEVLQENYTHLP---KADIFALALTVVCAAGAEPLPRNGDQW 235
Query: 214 GLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
+I + + +P S L+K M+ +PE RPSA L+KH L
Sbjct: 236 ---HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 281
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 1 MESRMD-QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALI 59
M+SR ++ +E+IG G FG+ R + Y +K+ + ++A +E+
Sbjct: 3 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH 62
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYFPEEKLCKWFAQ 116
A + QH ++V + AW E ++ I YC GG +A+ + ++ +YF E +L Q
Sbjct: 63 AVLGQHSHVVRYFSAWAEDD-HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 121
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTK-----------DQD--------VRLGDFGLAKT 157
+ + Y+HS ++H D+K SNIF+++ D+D ++GD G
Sbjct: 122 VGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 181
Query: 158 LKADDLASSVVGTPNYMCPELLAD----IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMA 213
+ + + G ++ E+L + +P K+DI++L + A P + D
Sbjct: 182 ISSPQVEE---GDSRFLANEVLQENYTHLP---KADIFALALTVVCAAGAEPLPRNGDQW 235
Query: 214 GLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
+I + + +P S L+K M+ +PE RPSA L+KH L
Sbjct: 236 ---HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 281
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 160
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 218
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 278
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 279 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 336
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 121/277 (43%), Gaps = 33/277 (11%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEK--KKYVLKKIR------LARQTERCRRSA 52
+E + + E IG G FG +RA + +K R +++ E R
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKV----YRAFWIGDEVAVKAARHDPDEDISQTIENVR--- 54
Query: 53 HQEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK 112
QE L A ++HP I+ + K +C+V + GG + ++ +G P + L
Sbjct: 55 -QEAKLFAMLKHPNIIALRGV-CLKEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVN 109
Query: 113 WFAQLLLAVDYLHSNYV---LHRDLKCSNIFLTK--------DQDVRLGDFGLAKTLKAD 161
W Q+ ++YLH + +HRDLK SNI + + ++ +++ DFGLA+
Sbjct: 110 WAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169
Query: 162 DLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINR 221
S G +M PE++ + SD+WS G ++E+ F+ D + +
Sbjct: 170 T-KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM 228
Query: 222 SSIG-PLPSCYSPSLKTLIKGMLRKNPEHRPSASELL 257
+ + P+PS L++ +P RPS + +L
Sbjct: 229 NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 149
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 207
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 267
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 268 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 200
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 260
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 261 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 136
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 137 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 194
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 195 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 254
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 255 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 312
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 1 MESRMD-QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALI 59
M+SR ++ +E+IG G FG+ R + Y +K+ + ++A +E+
Sbjct: 5 MKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH 64
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYFPEEKLCKWFAQ 116
A + QH ++V + AW E ++ I YC GG +A+ + ++ +YF E +L Q
Sbjct: 65 AVLGQHSHVVRYFSAWAEDD-HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 123
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTK-----------DQD--------VRLGDFGLAKT 157
+ + Y+HS ++H D+K SNIF+++ D+D ++GD G
Sbjct: 124 VGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 183
Query: 158 LKADDLASSVVGTPNYMCPELLAD----IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMA 213
+ + + G ++ E+L + +P K+DI++L + A P + D
Sbjct: 184 ISSPQVEE---GDSRFLANEVLQENYTHLP---KADIFALALTVVCAAGAEPLPRNGDQW 237
Query: 214 GLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
+I + + +P S L+K M+ +PE RPSA L+KH L
Sbjct: 238 ---HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVL 283
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 23/265 (8%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQ-HPYIVEFKE 72
+G G+F H+ + + +K I ++R + +E+ + + HP IV+ E
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII-----SKRMEANTQKEITALKLCEGHPNIVKLHE 73
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
+ ++ + +V GG++ E +KK +F E + +L+ AV ++H V+HR
Sbjct: 74 VFHDQ-LHTFLVMELLNGGELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 133 DLKCSNIFLTKDQD---VRLGDFGLAKTLKADDL-ASSVVGTPNYMCPELLADIPYGFKS 188
DLK N+ T + D +++ DFG A+ D+ + T +Y PELL Y
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESC 190
Query: 189 DIWSLGCCMYEMAAHRPAFKAFD-------MAGLISKINRSSI---GPLPSCYSPSLKTL 238
D+WSLG +Y M + + F++ D ++ KI + G S K L
Sbjct: 191 DLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL 250
Query: 239 IKGMLRKNPEHRPSASELLKHPFLQ 263
I+G+L +P R S L + +LQ
Sbjct: 251 IQGLLTVDPNKRLKMSGLRYNEWLQ 275
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 31/264 (11%)
Query: 10 IMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
+++IG G FG L + K K +K IR +E +E ++ ++ HP +V+
Sbjct: 14 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQ 69
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
+E+ +C+V + E G +++ ++ G F E L + + YL V
Sbjct: 70 LYGVCLEQAP-ICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACV 127
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYGF 186
+HRDL N + ++Q +++ DFG+ + + DD +S GT + PE+ + Y
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSS 186
Query: 187 KSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSS------IGPLPSCYSPSLKT--- 237
KSD+WS G M+E+ + G I NRS+ I Y P L +
Sbjct: 187 KSDVWSFGVLMWEVFSE----------GKIPYENRSNSEVVEDISTGFRLYKPRLASTHV 236
Query: 238 --LIKGMLRKNPEHRPSASELLKH 259
++ R+ PE RP+ S LL+
Sbjct: 237 YQIMNHCWRERPEDRPAFSRLLRQ 260
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 148
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 206
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 266
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 267 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 324
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 6/207 (2%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLA-RQTERCRRSAHQEMALIARVQH 64
++Y+I++++G G L K +K I + R+ E + +E+ +++ H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
IV + E CY +V Y EG ++E ++ S+G + + Q+L + +
Sbjct: 71 QNIVSMIDVDEEDDCY-YLVMEYIEGPTLSEYIE-SHGP-LSVDTAINFTNQILDGIKHA 127
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASS--VVGTPNYMCPELLADI 182
H ++HRD+K NI + ++ +++ DFG+AK L L + V+GT Y PE
Sbjct: 128 HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPAFKA 209
+DI+S+G +YEM P F
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGXVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 142
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 200
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 260
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 261 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 134
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 192
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 252
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 253 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 310
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 133
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 191
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 251
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 252 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 143
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 201
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 261
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 262 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 42/231 (18%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKI-RLARQTERCRRSAHQEMALIARVQH 64
D+YEI IG G++G + EK+ +KKI R+ C+R +E+A++ R+ H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRIL-REIAILNRLNH 111
Query: 65 PYIVEFKEAWVEKGC------YVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
++V+ + + K YV + D +L + Y E + LL
Sbjct: 112 DHVVKVLDIVIPKDVEKFDELYVVLEIA---DSDFKKLFRTP--VYLTELHIKTLLYNLL 166
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTL--------------KADDL- 163
+ V Y+HS +LHRDLK +N + +D V++ DFGLA+T+ + DD+
Sbjct: 167 VGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 164 -------------ASSVVGTPNYMCPEL-LADIPYGFKSDIWSLGCCMYEM 200
+ V T Y PEL L Y D+WS+GC E+
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 135
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 136 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 193
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 253
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 254 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 311
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 134
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD + V T Y PE++
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIML 192
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 252
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 253 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 310
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 125/270 (46%), Gaps = 28/270 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR--LARQTE---RCRRSAHQEMALIA 60
D+YE+ E +G G L + +K +R LAR R RR A AL
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-- 86
Query: 61 RVQHPYIV---EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQL 117
HP IV + EA G IV Y +G + +++ + G P+ + + A
Sbjct: 87 --NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAI-EVIADA 142
Query: 118 LLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD-----LASSVVGTPN 172
A+++ H N ++HRD+K +NI ++ V++ DFG+A+ + AD ++V+GT
Sbjct: 143 CQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTAQ 201
Query: 173 YMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSC-- 230
Y+ PE +SD++SLGC +YE+ P F + + R P+P
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSAR 259
Query: 231 ---YSPSLKTLIKGMLRKNPEHR-PSASEL 256
S L ++ L KNPE+R +A+E+
Sbjct: 260 HEGLSADLDAVVLKALAKNPENRYQTAAEM 289
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 9/222 (4%)
Query: 42 ARQTERCRRSAHQEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN 101
A TER RR E +++ + HP I+ E V +G IVT Y E G + ++ +
Sbjct: 87 AGYTERQRRDFLSEASIMGQFDHPNIIRL-EGVVTRGRLAMIVTEYMENGSLDTFLRTHD 145
Query: 102 GAYFPEEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD 161
G F +L + + YL +HRDL N+ + + ++ DFGL++ L+ D
Sbjct: 146 GQ-FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 162 -DLASSVVGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGL 215
D A + G + PE +A + SD+WS G M+E+ A+ RP + + +
Sbjct: 205 PDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN-RDV 263
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELL 257
IS + P P +L L+ K+ RP S+++
Sbjct: 264 ISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 160
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ DD V T Y PE++
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGYVATRWYRAPEIML 218
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 278
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 279 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 336
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 24/276 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ + + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFA----- 115
H +V A + G + ++ +C+ G+++ ++ + P + L K F
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 116 -----QLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDLASSVV 168
Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 169 GTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKINRSS 223
P +M PE + D Y +SD+WS G ++E+ A+ P K + ++ +
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFXRRLKEGT 264
Query: 224 IGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
P +P + + P RP+ SEL++H
Sbjct: 265 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 31/264 (11%)
Query: 10 IMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
+++IG G FG L + K K +K IR +E +E ++ ++ HP +V+
Sbjct: 11 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQ 66
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
+E+ +C+V + E G +++ ++ G F E L + + YL V
Sbjct: 67 LYGVCLEQAP-ICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEASV 124
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYGF 186
+HRDL N + ++Q +++ DFG+ + + DD +S GT + PE+ + Y
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 187 KSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSS------IGPLPSCYSPSLKT--- 237
KSD+WS G M+E+ + G I NRS+ I Y P L +
Sbjct: 184 KSDVWSFGVLMWEVFSE----------GKIPYENRSNSEVVEDISTGFRLYKPRLASTHV 233
Query: 238 --LIKGMLRKNPEHRPSASELLKH 259
++ ++ PE RP+ S LL+
Sbjct: 234 YQIMNHCWKERPEDRPAFSRLLRQ 257
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 9/222 (4%)
Query: 42 ARQTERCRRSAHQEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN 101
A TER RR E +++ + HP I+ E V +G IVT Y E G + ++ +
Sbjct: 87 AGYTERQRRDFLSEASIMGQFDHPNIIRL-EGVVTRGRLAMIVTEYMENGSLDTFLRTHD 145
Query: 102 GAYFPEEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD 161
G F +L + + YL +HRDL N+ + + ++ DFGL++ L+ D
Sbjct: 146 GQ-FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 162 -DLASSVVGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGL 215
D A + G + PE +A + SD+WS G M+E+ A+ RP + + +
Sbjct: 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN-RDV 263
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELL 257
IS + P P +L L+ K+ RP S+++
Sbjct: 264 ISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 31/264 (11%)
Query: 10 IMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
+++IG G FG L + K K +K IR +E +E ++ ++ HP +V+
Sbjct: 9 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQ 64
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
+E+ +C+V + E G +++ ++ G F E L + + YL V
Sbjct: 65 LYGVCLEQAP-ICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACV 122
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYGF 186
+HRDL N + ++Q +++ DFG+ + + DD +S GT + PE+ + Y
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSS 181
Query: 187 KSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSS------IGPLPSCYSPSLKT--- 237
KSD+WS G M+E+ + G I NRS+ I Y P L +
Sbjct: 182 KSDVWSFGVLMWEVFSE----------GKIPYENRSNSEVVEDISTGFRLYKPRLASTHV 231
Query: 238 --LIKGMLRKNPEHRPSASELLKH 259
++ ++ PE RP+ S LL+
Sbjct: 232 YQIMNHCWKERPEDRPAFSRLLRQ 255
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 31/264 (11%)
Query: 10 IMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
+++IG G FG L + K K +K IR +E +E ++ ++ HP +V+
Sbjct: 11 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQ 66
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
+E+ +C+V + E G +++ ++ G F E L + + YL V
Sbjct: 67 LYGVCLEQAP-ICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACV 124
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYGF 186
+HRDL N + ++Q +++ DFG+ + + DD +S GT + PE+ + Y
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 187 KSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSS------IGPLPSCYSPSLKT--- 237
KSD+WS G M+E+ + G I NRS+ I Y P L +
Sbjct: 184 KSDVWSFGVLMWEVFSE----------GKIPYENRSNSEVVEDISTGFRLYKPRLASTHV 233
Query: 238 --LIKGMLRKNPEHRPSASELLKH 259
++ ++ PE RP+ S LL+
Sbjct: 234 YQIMNHCWKERPEDRPAFSRLLRQ 257
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 26/278 (9%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ ++ + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPE------------E 108
H +V A + G + ++ +C+ G+++ ++ + P E
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 109 KLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDLASS 166
L + Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 149 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 167 VVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKINR 221
P +M PE + D Y +SD+WS G ++E+ A+ P K + ++
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 266
Query: 222 SSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ P +P + + P RP+ SEL++H
Sbjct: 267 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 121/261 (46%), Gaps = 17/261 (6%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPY 66
+I + IG G FG + + K+ + I+ + TE+ RR E +++ + HP
Sbjct: 36 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 95
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
++ E V K V I+T + E G + +++++G F +L + + YL
Sbjct: 96 VIHL-EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKYLAD 153
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK---ADDLASSVVGTP---NYMCPELLA 180
+HRDL NI + + ++ DFGL++ L+ +D +S +G + PE +
Sbjct: 154 MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 181 DIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAG--LISKINRSSIGPLPSCYSPSLK 236
+ SD+WS G M+E+ ++ RP +DM +I+ I + P P +L
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMSYGERP---YWDMTNQDVINAIEQDYRLPPPMDCPSALH 270
Query: 237 TLIKGMLRKNPEHRPSASELL 257
L+ +K+ HRP +++
Sbjct: 271 QLMLDCWQKDRNHRPKFGQIV 291
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ D+GLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 122/257 (47%), Gaps = 17/257 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M + ++++ IG+G FG +L ++R K +K I+ + ++ E +++ +++H
Sbjct: 11 MKELKLLQTIGKGEFGDVMLGDYRG--NKVAVKCIK----NDATAQAFLAEASVMTQLRH 64
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+ VE+ + IVT Y G + + ++ + + L K+ + A++YL
Sbjct: 65 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 124
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP----NYMCPELLA 180
N +HRDL N+ +++D ++ DFGL K ASS T + PE L
Sbjct: 125 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE------ASSTQDTGKLPVKWTAPEALR 178
Query: 181 DIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ + KSD+WS G ++E+ + R + + ++ ++ + P P++ ++
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVM 238
Query: 240 KGMLRKNPEHRPSASEL 256
K + RPS +L
Sbjct: 239 KNCWHLDAAMRPSFLQL 255
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 79.7 bits (195), Expect = 8e-15, Method: Composition-based stats.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IVT Y G + + +K G Y +L
Sbjct: 59 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMNKGSLLDFLKGETGKYLRLPQLVDM 116
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
AQ+ + Y+ +HRDL+ +NI + ++ ++ DFGLA+ ++ ++ A P
Sbjct: 117 SAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 176
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 236
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPA 276
SL L+ RK PE RP+ L FL+ + P + P
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFEYL--QAFLEDYFTSTEPQYQPG 280
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 79.7 bits (195), Expect = 8e-15, Method: Composition-based stats.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IVT Y G + + +K G Y +L
Sbjct: 55 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 112
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
AQ+ + Y+ +HRDL+ +NI + ++ ++ DFGLA+ ++ ++ A P
Sbjct: 113 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 172
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 173 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 232
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPA 276
SL L+ RK PE RP+ L FL+ + P + P
Sbjct: 233 CPESLHDLMCQCWRKEPEERPTFEYL--QAFLEDYFTSTEPQYQPG 276
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.3 bits (194), Expect = 9e-15, Method: Composition-based stats.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IVT Y G + + +K G Y +L
Sbjct: 59 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMNKGSLLDFLKGETGKYLRLPQLVDM 116
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD-LASSVVGTP- 171
AQ+ + Y+ +HRDL+ +NI + ++ ++ DFGLA+ ++ ++ A P
Sbjct: 117 SAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPI 176
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 236
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPA 276
SL L+ RK PE RP+ L FL+ + P + P
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFEYL--QAFLEDYFTSTEPQYQPG 280
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 79.3 bits (194), Expect = 9e-15, Method: Composition-based stats.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 7/226 (3%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IVT Y G + + +K G Y +L
Sbjct: 51 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 108
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
AQ+ + Y+ +HRDL+ +NI + ++ ++ DFGLA+ ++ ++ A P
Sbjct: 109 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 168
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 169 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 228
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPA 276
SL L+ RK+PE RP+ L FL+ + P + P
Sbjct: 229 CPESLHDLMCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQPG 272
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 79.3 bits (194), Expect = 9e-15, Method: Composition-based stats.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 7/226 (3%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IVT Y G + + +K G Y +L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
AQ+ + Y+ +HRDL+ +NI + ++ ++ DFGLA+ ++ ++ A P
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPA 276
SL L+ RK+PE RP+ L FL+ + P + P
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQPG 283
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 5 MDQYE-----IMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMA 57
M Q+E ++Q+G+G FG+ + + + V+ +L TE R +E+
Sbjct: 22 MTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 81
Query: 58 LIARVQHPYIVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLC 111
++ +QH IV++K CY + ++ Y G + + ++K KL
Sbjct: 82 ILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLL 135
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP 171
++ +Q+ ++YL + +HRDL NI + + V++GDFGL K L D V P
Sbjct: 136 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEP 194
Query: 172 N-----YMCPELLADIPYGFKSDIWSLGCCMYEMAAH 203
+ PE L + + SD+WS G +YE+ +
Sbjct: 195 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 231
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 5 MDQYE-----IMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMA 57
M Q+E ++Q+G+G FG+ + + + V+ +L TE R +E+
Sbjct: 22 MTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 81
Query: 58 LIARVQHPYIVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLC 111
++ +QH IV++K CY + ++ Y G + + ++K KL
Sbjct: 82 ILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLL 135
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP 171
++ +Q+ ++YL + +HRDL NI + + V++GDFGL K L D V P
Sbjct: 136 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEP 194
Query: 172 N-----YMCPELLADIPYGFKSDIWSLGCCMYEMAAH 203
+ PE L + + SD+WS G +YE+ +
Sbjct: 195 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 231
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 9 EIMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ ++Q+G+G FG+ + + + V+ +L TE R +E+ ++ +QH
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 67 IVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
IV++K CY + ++ Y G + + ++K KL ++ +Q+
Sbjct: 76 IVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKG 129
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----YMC 175
++YL + +HRDL NI + + V++GDFGL K L D V P +
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPIFWYA 188
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAH 203
PE L + + SD+WS G +YE+ +
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTY 216
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 138/298 (46%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ AD++ + V T Y PE++
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-TADEM-TGYVATRWYRAPEIML 202
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 262
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 263 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 40/229 (17%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKI-RLARQTERCRRSAHQEMALIARVQH 64
D YEI IGRG++G L + K +KK+ R+ C+R +E+ ++ R++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRIL-REITILNRLKS 86
Query: 65 PYIVEFKEAWVEKGC------YVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
YI+ + + + Y+ + D+ +L K + E+ + LL
Sbjct: 87 DYIIRLHDLIIPEDLLKFDELYIVLEIA---DSDLKKLFKTP--IFLTEQHVKTILYNLL 141
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-------DL-------- 163
L ++H + ++HRDLK +N L +D V++ DFGLA+T+ +D DL
Sbjct: 142 LGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEE 201
Query: 164 -----------ASSVVGTPNYMCPEL-LADIPYGFKSDIWSLGCCMYEM 200
+S V T Y PEL L Y DIWS GC E+
Sbjct: 202 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
E + ++ E+ IG G FG + + + + I+ + ++ R QE +
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ HP+IV+ E V I+ C G++ ++ + L + QL
Sbjct: 446 RQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLST 502
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT--PNYMCPE 177
A+ YL S +HRD+ N+ ++ + V+LGDFGL++ ++ + G +M PE
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSL 235
+ + SD+W G CM+E+ H +P F+ +I +I P+P P+L
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTL 621
Query: 236 KTLIKGMLRKNPEHRPSASEL 256
+L+ +P RP +EL
Sbjct: 622 YSLMTKCWAYDPSRRPRFTEL 642
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 9 EIMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ ++Q+G+G FG+ + + + V+ +L TE R +E+ ++ +QH
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 67 IVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
IV++K CY + ++ Y G + + ++K KL ++ +Q+
Sbjct: 80 IVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKG 133
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----YMC 175
++YL + +HRDL NI + + V++GDFGL K L D V P +
Sbjct: 134 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPIFWYA 192
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAH 203
PE L + + SD+WS G +YE+ +
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYELFTY 220
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 9 EIMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ ++Q+G+G FG+ + + + V+ +L TE R +E+ ++ +QH
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 67 IVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
IV++K CY + ++ Y G + + ++K KL ++ +Q+
Sbjct: 104 IVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKG 157
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----YMC 175
++YL + +HRDL NI + + V++GDFGL K L D V P +
Sbjct: 158 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPIFWYA 216
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAH 203
PE L + + SD+WS G +YE+ +
Sbjct: 217 PESLTESKFSVASDVWSFGVVLYELFTY 244
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 9 EIMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ ++Q+G+G FG+ + + + V+ +L TE R +E+ ++ +QH
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 67 IVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
IV++K CY + ++ Y G + + ++K KL ++ +Q+
Sbjct: 72 IVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKG 125
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----YMC 175
++YL + +HRDL NI + + V++GDFGL K L D V P +
Sbjct: 126 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPIFWYA 184
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAH 203
PE L + + SD+WS G +YE+ +
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYELFTY 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 9 EIMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ ++Q+G+G FG+ + + + V+ +L TE R +E+ ++ +QH
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 67 IVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
IV++K CY + ++ Y G + + ++K KL ++ +Q+
Sbjct: 78 IVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKG 131
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----YMC 175
++YL + +HRDL NI + + V++GDFGL K L D V P +
Sbjct: 132 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPIFWYA 190
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAH 203
PE L + + SD+WS G +YE+ +
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYELFTY 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 9 EIMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ ++Q+G+G FG+ + + + V+ +L TE R +E+ ++ +QH
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 67 IVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
IV++K CY + ++ Y G + + ++K KL ++ +Q+
Sbjct: 77 IVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKG 130
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----YMC 175
++YL + +HRDL NI + + V++GDFGL K L D V P +
Sbjct: 131 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPIFWYA 189
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAH 203
PE L + + SD+WS G +YE+ +
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYELFTY 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 9 EIMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ ++Q+G+G FG+ + + + V+ +L TE R +E+ ++ +QH
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 67 IVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
IV++K CY + ++ Y G + + ++K KL ++ +Q+
Sbjct: 73 IVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKG 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----YMC 175
++YL + +HRDL NI + + V++GDFGL K L D V P +
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPIFWYA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAH 203
PE L + + SD+WS G +YE+ +
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTY 213
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 135/334 (40%), Gaps = 79/334 (23%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTER-CRRSAHQEMALIARVQ 63
+ +YE+++++G+GA+G R + +KKI A Q +R+ + M L
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 64 HPYIVEFKEAW-VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFA--QLLLA 120
H IV + V +V Y E D+ +++ + E + K + QL+
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRAN-----ILEPVHKQYVVYQLIKV 121
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTL-------------------KAD 161
+ YLHS +LHRD+K SNI L + V++ DFGL+++ D
Sbjct: 122 IKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 162 D---LASSVVGTPNYMCPE-LLADIPYGFKSDIWSLGCCMYEMAAHRPAF----KAFDMA 213
D + + V T Y PE LL Y D+WSLGC + E+ +P F +
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLE 241
Query: 214 GLISKINRSSIGPLPSCYSPSLKTLIKG-------------------------------- 241
+I I+ S + S SP KT+I+
Sbjct: 242 RIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADC 301
Query: 242 ----------MLRKNPEHRPSASELLKHPFLQHF 265
+L+ NP R SA++ LKHPF+ F
Sbjct: 302 NEEALDLLDKLLQFNPNKRISANDALKHPFVSIF 335
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 19/124 (15%)
Query: 378 VESKQPKTIKSIMMALKEGKVRENGSPMRSTRTKAVGTPTQRCNTEASPKVLKPCSVAPG 437
VES Q K+++ +LKE KV +R + + + T + + +PK C
Sbjct: 255 VESIQSPFAKTMIESLKE-KVE-----IRQSNKRDIFTKWKNLLLKINPKA--DC----- 301
Query: 438 LKSNADTQGLAPAKLMFDSAKRVQGSNTLKHQLPVIDSSPKTKPRHD---GIPPTGPVKH 494
N + L L F+ KR+ ++ LKH I +P +P D IP VKH
Sbjct: 302 ---NEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDHIITIPINDNVKH 358
Query: 495 VGED 498
+D
Sbjct: 359 SIDD 362
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 30/281 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ ++ + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFP-------------- 106
H +V A + G + ++T +C+ G+++ ++ + P
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 107 -EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDL 163
E +C F Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 138 LEHLICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 164 ASSVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISK 218
P +M PE + D Y +SD+WS G ++E+ A+ P K + +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRR 254
Query: 219 INRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ + P +P + + P RP+ SEL++H
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 121/261 (46%), Gaps = 11/261 (4%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
ME + ++ +++++G G FG L + + V ++ ++ QE +
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAV----KMIKEGSMSEDEFFQEAQTMM 58
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ HP +V+F K + IVT Y G + ++ S+G +L + +
Sbjct: 59 KLSHPKLVKFYGV-CSKEYPIYIVTEYISNGCLLNYLR-SHGKGLEPSQLLEMCYDVCEG 116
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPE 177
+ +L S+ +HRDL N + +D V++ DFG+ + + D SS VGT + PE
Sbjct: 117 MAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS-VGTKFPVKWSAPE 175
Query: 178 LLADIPYGFKSDIWSLGCCMYEM-AAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLK 236
+ Y KSD+W+ G M+E+ + + + + + ++ K+++ P S ++
Sbjct: 176 VFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIY 235
Query: 237 TLIKGMLRKNPEHRPSASELL 257
++ + PE RP+ +LL
Sbjct: 236 QIMYSCWHELPEKRPTFQQLL 256
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 9 EIMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ ++Q+G+G FG+ + + + V+ +L TE R +E+ ++ +QH
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 67 IVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
IV++K CY + ++ Y G + + ++K KL ++ +Q+
Sbjct: 71 IVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKG 124
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----YMC 175
++YL + +HRDL NI + + V++GDFGL K L D V P +
Sbjct: 125 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPIFWYA 183
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAH 203
PE L + + SD+WS G +YE+ +
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYELFTY 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Query: 9 EIMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ ++Q+G+G FG+ + + + V+ +L TE R +E+ ++ +QH
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 67 IVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
IV++K CY + ++ Y G + + ++K + KL ++ +Q+
Sbjct: 73 IVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKG 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----YMC 175
++YL + +HRDL NI + + V++GDFGL K L D V P +
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPIFWYA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAH 203
PE L + + SD+WS G +YE+ +
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTY 213
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKI-RLARQTERCRRSAHQEMALIARVQH 64
D Y I IGRG++G L + +K +KK+ R+ C+R +E+ ++ R++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRIL-REITILNRLKS 84
Query: 65 PYIVEFKEAWV----EKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
YI+ + + K + IV + D+ +L K + EE + LLL
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTP--IFLTEEHIKTILYNLLLG 141
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA-------DDL---------- 163
+++H + ++HRDLK +N L +D V++ DFGLA+T+ + +DL
Sbjct: 142 ENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Query: 164 ------ASSVVGTPNYMCPEL-LADIPYGFKSDIWSLGCCMYEM 200
+S V T Y PEL L Y DIWS GC E+
Sbjct: 202 KNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 138/298 (46%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ AD++ + V T Y PE++
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-TADEM-TGYVATRWYRAPEIML 202
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 262
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 263 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 24/276 (8%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ + + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFA----- 115
H +V A + G + ++ +C+ G+++ ++ + P + L K F
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 116 -----QLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDLASSVV 168
Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 147 ICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 169 GTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKINRSS 223
P +M PE + D Y +SD+WS G ++E+ A+ P K + ++ +
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKEGT 264
Query: 224 IGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
P +P + + P RP+ SEL++H
Sbjct: 265 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 122/257 (47%), Gaps = 17/257 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M + ++++ IG+G FG +L ++R K +K I+ + ++ E +++ +++H
Sbjct: 5 MKELKLLQTIGKGEFGDVMLGDYRG--NKVAVKCIK----NDATAQAFLAEASVMTQLRH 58
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+ VE+ + IVT Y G + + ++ + + L K+ + A++YL
Sbjct: 59 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 118
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP----NYMCPELLA 180
N +HRDL N+ +++D ++ DFGL K ASS T + PE L
Sbjct: 119 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE------ASSTQDTGKLPVKWTAPEALR 172
Query: 181 DIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ + KSD+WS G ++E+ + R + + ++ ++ + P P++ ++
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVM 232
Query: 240 KGMLRKNPEHRPSASEL 256
K + RPS +L
Sbjct: 233 KNCWHLDAAMRPSFLQL 249
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 9 EIMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ ++Q+G+G FG+ + + + V+ +L TE R +E+ ++ +QH
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 67 IVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
IV++K CY + ++ Y G + + ++K KL ++ +Q+
Sbjct: 79 IVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKG 132
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----YMC 175
++YL + +HRDL NI + + V++GDFGL K L D V P +
Sbjct: 133 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPIFWYA 191
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAH 203
PE L + + SD+WS G +YE+ +
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYELFTY 219
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 12/263 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTER--CRRSAHQEMALIAR 61
+D ++I+ +G+G FG L R ++ K+++ K+ Q E+ +E+ + +
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLA--REKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH 70
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
++HP I+ + ++ ++ G EL K F E++ + +L A+
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADAL 127
Query: 122 DYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTPNYMCPELLA 180
Y H V+HRD+K N+ + ++++ DFG ++ A L + GT +Y+ PE++
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+W G YE P F + +I + P S K LI
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK-FPPFLSDGSKDLIS 244
Query: 241 GMLRKNPEHRPSASELLKHPFLQ 263
+LR +P R +++HP+++
Sbjct: 245 KLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 138/298 (46%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 144
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DFGLA+ AD++ + V T Y PE++
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH-TADEM-TGYVATRWYRAPEIML 202
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 262
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 263 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 21/262 (8%)
Query: 12 EQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCR-----RSAHQEMALIARVQHPY 66
E +G G FG H+ E+ LK LA + + R E++++ ++ H
Sbjct: 95 EILGGGRFGQV----HKCEETATGLK---LAAKIIKTRGMKDKEEVKNEISVMNQLDHAN 147
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAE-LMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
+++ +A+ K + +V Y +GG++ + ++ +S E + Q+ + ++H
Sbjct: 148 LIQLYDAFESKND-IVLVMEYVDGGELFDRIIDESYN--LTELDTILFMKQICEGIRHMH 204
Query: 126 SNYVLHRDLKCSNIF-LTKD-QDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIP 183
Y+LH DLK NI + +D + +++ DFGLA+ K + GTP ++ PE++
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDF 264
Query: 184 YGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY---SPSLKTLIK 240
F +D+WS+G Y + + F + A ++ I + S K I
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFIS 324
Query: 241 GMLRKNPEHRPSASELLKHPFL 262
+L K R SASE LKHP+L
Sbjct: 325 KLLIKEKSWRISASEALKHPWL 346
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 29/280 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ + + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFP-------------- 106
H +V A + G + ++ +C+ G+++ ++ + P
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDLA 164
E +C F Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 148 EHLICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 165 SSVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKI 219
P +M PE + D Y +SD+WS G ++E+ A+ P K + ++
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRL 264
Query: 220 NRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ P +P + + P RP+ SEL++H
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 122/257 (47%), Gaps = 17/257 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M + ++++ IG+G FG +L ++R K +K I+ + ++ E +++ +++H
Sbjct: 20 MKELKLLQTIGKGEFGDVMLGDYRG--NKVAVKCIK----NDATAQAFLAEASVMTQLRH 73
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+ VE+ + IVT Y G + + ++ + + L K+ + A++YL
Sbjct: 74 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP----NYMCPELLA 180
N +HRDL N+ +++D ++ DFGL K ASS T + PE L
Sbjct: 134 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE------ASSTQDTGKLPVKWTAPEALR 187
Query: 181 DIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ + KSD+WS G ++E+ + R + + ++ ++ + P P++ ++
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVM 247
Query: 240 KGMLRKNPEHRPSASEL 256
K + RPS +L
Sbjct: 248 KNCWHLDAAMRPSFLQL 264
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 78.6 bits (192), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IVT Y G + + +K G Y +L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
AQ+ + Y+ +HRDL +NI + ++ ++ DFGLA+ ++ ++ A P
Sbjct: 120 AAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPA 276
SL L+ RK+PE RP+ L FL+ + P + P
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQPG 283
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ FGLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ DF LA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 7/226 (3%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IVT Y G + + +K G Y +L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM 119
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
AQ+ + Y+ +HRDL+ +NI + ++ ++ DFGLA+ ++ ++ A P
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPA 276
SL L+ RK+PE RP+ L FL+ + P + P
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQPG 283
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Query: 9 EIMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ ++Q+G+G FG+ + + + V+ +L TE R +E+ ++ +QH
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 67 IVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
IV++K CY + ++ Y G + + ++ ++ KL ++ +Q+
Sbjct: 76 IVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQ-AHAERIDHIKLLQYTSQICKG 129
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----YMC 175
++YL + +HRDL NI + + V++GDFGL K L D V P +
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPIFWYA 188
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAH 203
PE L + + SD+WS G +YE+ +
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTY 216
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
E + ++ E+ IG G FG + + + + I+ + ++ R QE +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ HP+IV+ E V I+ C G++ ++ + L + QL
Sbjct: 66 RQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLST 122
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT--PNYMCPE 177
A+ YL S +HRD+ N+ ++ + V+LGDFGL++ ++ + G +M PE
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE 182
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSL 235
+ + SD+W G CM+E+ H +P F+ +I +I P+P P+L
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTL 241
Query: 236 KTLIKGMLRKNPEHRPSASEL 256
+L+ +P RP +EL
Sbjct: 242 YSLMTKCWAYDPSRRPRFTEL 262
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 9 EIMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ + Q+G+G FG+ + + + V+ +L TE R +E+ ++ +QH
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 67 IVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
IV++K CY + ++ + G + E ++K + KL ++ +Q+
Sbjct: 76 IVKYKGV-----CYSAGRRNLKLIMEFLPYGSLREYLQK-HKERIDHIKLLQYTSQICKG 129
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----YMC 175
++YL + +HRDL NI + + V++GDFGL K L D V P +
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPGESPIFWYA 188
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAH 203
PE L + + SD+WS G +YE+ +
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTY 216
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 30/281 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ ++ + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFP-------------- 106
H +V A + G + ++ +C+ G+++ ++ + P
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 107 -EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDL 163
E +C F Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 147 LEHLICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 164 ASSVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISK 218
P +M PE + D Y +SD+WS G ++E+ A+ P K + +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRR 263
Query: 219 INRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ + P +P + + P RP+ SEL++H
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
E + ++ E+ IG G FG + + + + I+ + ++ R QE +
Sbjct: 34 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 93
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ HP+IV+ E V I+ C G++ ++ + L + QL
Sbjct: 94 RQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLST 150
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT--PNYMCPE 177
A+ YL S +HRD+ N+ ++ + V+LGDFGL++ ++ + G +M PE
Sbjct: 151 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 210
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSL 235
+ + SD+W G CM+E+ H +P F+ +I +I P+P P+L
Sbjct: 211 SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTL 269
Query: 236 KTLIKGMLRKNPEHRPSASEL 256
+L+ +P RP +EL
Sbjct: 270 YSLMTKCWAYDPSRRPRFTEL 290
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 13/269 (4%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
+++E++G G FG + + K ++ +Q + E L+ ++QH +V
Sbjct: 24 KLVERLGAGQFGEVWMGYYNGHTKV----AVKSLKQGSMSPDAFLAEANLMKQLQHQRLV 79
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
++ Y I+T Y E G + + +K +G KL AQ+ + ++
Sbjct: 80 RLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 137
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYG 185
+HRDL+ +NI ++ ++ DFGLA+ ++ D+ ++ G + PE + +
Sbjct: 138 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 186 FKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLR 244
KSD+WS G + E+ H R + +I + R P L L++ +
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 256
Query: 245 KNPEHRPSASEL--LKHPFLQHFVDQYRP 271
+ PE RP+ L + F QY+P
Sbjct: 257 ERPEDRPTFDYLRSVLEDFFTATEGQYQP 285
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
E + ++ E+ IG G FG + + + + I+ + ++ R QE +
Sbjct: 9 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 68
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ HP+IV+ E V I+ C G++ ++ + L + QL
Sbjct: 69 RQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLST 125
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT--PNYMCPE 177
A+ YL S +HRD+ N+ ++ + V+LGDFGL++ ++ + G +M PE
Sbjct: 126 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 185
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSL 235
+ + SD+W G CM+E+ H +P F+ +I +I P+P P+L
Sbjct: 186 SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTL 244
Query: 236 KTLIKGMLRKNPEHRPSASEL 256
+L+ +P RP +EL
Sbjct: 245 YSLMTKCWAYDPSRRPRFTEL 265
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
E + ++ E+ IG G FG + + + + I+ + ++ R QE +
Sbjct: 8 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 67
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ HP+IV+ E V I+ C G++ ++ + L + QL
Sbjct: 68 RQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLST 124
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT--PNYMCPE 177
A+ YL S +HRD+ N+ ++ + V+LGDFGL++ ++ + G +M PE
Sbjct: 125 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 184
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSL 235
+ + SD+W G CM+E+ H +P F+ +I +I P+P P+L
Sbjct: 185 SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTL 243
Query: 236 KTLIKGMLRKNPEHRPSASEL 256
+L+ +P RP +EL
Sbjct: 244 YSLMTKCWAYDPSRRPRFTEL 264
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 13/269 (4%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
+++E++G G FG + + K ++ +Q + E L+ ++QH +V
Sbjct: 22 KLVERLGAGQFGEVWMGYYNGHTKV----AVKSLKQGSMSPDAFLAEANLMKQLQHQRLV 77
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
++ Y I+T Y E G + + +K +G KL AQ+ + ++
Sbjct: 78 RLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYG 185
+HRDL+ +NI ++ ++ DFGLA+ ++ D+ ++ G + PE + +
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 186 FKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLR 244
KSD+WS G + E+ H R + +I + R P L L++ +
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 254
Query: 245 KNPEHRPSASEL--LKHPFLQHFVDQYRP 271
+ PE RP+ L + F QY+P
Sbjct: 255 ERPEDRPTFDYLRSVLEDFFTATEGQYQP 283
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 115/261 (44%), Gaps = 10/261 (3%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
E + ++ E+ IG G FG + + + + I+ + ++ R QE +
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ HP+IV+ E V I+ C G++ ++ + L + QL
Sbjct: 446 RQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLST 502
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT--PNYMCPE 177
A+ YL S +HRD+ N+ ++ V+LGDFGL++ ++ + G +M PE
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSL 235
+ + SD+W G CM+E+ H +P F+ +I +I P+P P+L
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTL 621
Query: 236 KTLIKGMLRKNPEHRPSASEL 256
+L+ +P RP +EL
Sbjct: 622 YSLMTKCWAYDPSRRPRFTEL 642
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 9 EIMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ ++Q+G+G FG+ + + + V+ +L TE R +E+ ++ +QH
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 67 IVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
IV++K CY + ++ Y G + + ++K KL ++ +Q+
Sbjct: 73 IVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKG 126
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----YMC 175
++YL + +HRDL NI + + V++GDFGL K L D V P +
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK-EFFKVKEPGESPIFWYA 185
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAH 203
PE L + + SD+WS G +YE+ +
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTY 213
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 122/257 (47%), Gaps = 17/257 (6%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M + ++++ IG+G FG +L ++R K +K I+ + ++ E +++ +++H
Sbjct: 192 MKELKLLQTIGKGEFGDVMLGDYRG--NKVAVKCIK----NDATAQAFLAEASVMTQLRH 245
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
+V+ VE+ + IVT Y G + + ++ + + L K+ + A++YL
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP----NYMCPELLA 180
N +HRDL N+ +++D ++ DFGL K ASS T + PE L
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE------ASSTQDTGKLPVKWTAPEALR 359
Query: 181 DIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLI 239
+ + KSD+WS G ++E+ + R + + ++ ++ + P P++ ++
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVM 419
Query: 240 KGMLRKNPEHRPSASEL 256
K + RP+ +L
Sbjct: 420 KNCWHLDAATRPTFLQL 436
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 11/268 (4%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
+++E++G G FG + + K ++ +Q + E L+ ++QH +V
Sbjct: 26 KLVERLGAGQFGEVWMGYYNGHTKV----AVKSLKQGSMSPDAFLAEANLMKQLQHQRLV 81
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
++ Y I+T Y E G + + +K +G KL AQ+ + ++
Sbjct: 82 RLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 139
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADIPYGF 186
+HRDL+ +NI ++ ++ DFGLA+ ++ ++ A P + PE + +
Sbjct: 140 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 199
Query: 187 KSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
KSD+WS G + E+ H R + +I + R P L L++ ++
Sbjct: 200 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 259
Query: 246 NPEHRPSASEL--LKHPFLQHFVDQYRP 271
PE RP+ L + F QY+P
Sbjct: 260 RPEDRPTFDYLRSVLEDFFTATEGQYQP 287
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
E + ++ E+ IG G FG + + + + I+ + ++ R QE +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ HP+IV+ E V I+ C G++ ++ + L + QL
Sbjct: 66 RQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLST 122
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT--PNYMCPE 177
A+ YL S +HRD+ N+ ++ + V+LGDFGL++ ++ + G +M PE
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSL 235
+ + SD+W G CM+E+ H +P F+ +I +I P+P P+L
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTL 241
Query: 236 KTLIKGMLRKNPEHRPSASEL 256
+L+ +P RP +EL
Sbjct: 242 YSLMTKCWAYDPSRRPRFTEL 262
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
E + ++ E+ IG G FG + + + + I+ + ++ R QE +
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ HP+IV+ E V I+ C G++ ++ + L + QL
Sbjct: 63 RQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLST 119
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT--PNYMCPE 177
A+ YL S +HRD+ N+ ++ + V+LGDFGL++ ++ + G +M PE
Sbjct: 120 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 179
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSL 235
+ + SD+W G CM+E+ H +P F+ +I +I P+P P+L
Sbjct: 180 SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTL 238
Query: 236 KTLIKGMLRKNPEHRPSASEL 256
+L+ +P RP +EL
Sbjct: 239 YSLMTKCWAYDPSRRPRFTEL 259
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 31/264 (11%)
Query: 10 IMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
+++IG G FG L + K K +K I+ +E +E ++ ++ HP +V+
Sbjct: 31 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIKEGSMSED---DFIEEAEVMMKLSHPKLVQ 86
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
+E+ +C+V + E G +++ ++ G F E L + + YL V
Sbjct: 87 LYGVCLEQAP-ICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACV 144
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYGF 186
+HRDL N + ++Q +++ DFG+ + + DD +S GT + PE+ + Y
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVFSFSRYSS 203
Query: 187 KSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSS------IGPLPSCYSPSLKT--- 237
KSD+WS G M+E+ + G I NRS+ I Y P L +
Sbjct: 204 KSDVWSFGVLMWEVFSE----------GKIPYENRSNSEVVEDISTGFRLYKPRLASTHV 253
Query: 238 --LIKGMLRKNPEHRPSASELLKH 259
++ ++ PE RP+ S LL+
Sbjct: 254 YQIMNHCWKERPEDRPAFSRLLRQ 277
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
E + ++ E+ IG G FG + + + + I+ + ++ R QE +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ HP+IV+ E V I+ C G++ ++ + L + QL
Sbjct: 66 RQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLST 122
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT--PNYMCPE 177
A+ YL S +HRD+ N+ ++ + V+LGDFGL++ ++ + G +M PE
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSL 235
+ + SD+W G CM+E+ H +P F+ +I +I P+P P+L
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTL 241
Query: 236 KTLIKGMLRKNPEHRPSASEL 256
+L+ +P RP +EL
Sbjct: 242 YSLMTKCWAYDPSRRPRFTEL 262
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 12/263 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTER--CRRSAHQEMALIAR 61
+D ++I +G+G FG L R ++ K+++ K+ Q E+ +E+ + +
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLA--REKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH 71
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
++HP I+ + ++ ++ G EL K F E++ + +L A+
Sbjct: 72 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADAL 128
Query: 122 DYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTPNYMCPELLA 180
Y H V+HRD+K N+ + ++++ DFG ++ A L + GT +Y+ PE++
Sbjct: 129 HYCHERKVIHRDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLPPEMIE 186
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+W G YE P F + +I + P S K LI
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL-KFPPFLSDGSKDLIS 245
Query: 241 GMLRKNPEHRPSASELLKHPFLQ 263
+LR +P R +++HP+++
Sbjct: 246 KLLRYHPPQRLPLKGVMEHPWVK 268
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 10/261 (3%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
E + ++ E+ IG G FG + + + + I+ + ++ R QE +
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ HP+IV+ E V I+ C G++ ++ + L + QL
Sbjct: 71 RQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLST 127
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT--PNYMCPE 177
A+ YL S +HRD+ N+ ++ + V+LGDFGL++ ++ + G +M PE
Sbjct: 128 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 187
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSL 235
+ + SD+W G CM+E+ H +P F+ +I +I P+P P+L
Sbjct: 188 SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTL 246
Query: 236 KTLIKGMLRKNPEHRPSASEL 256
+L+ +P RP +EL
Sbjct: 247 YSLMTKCWAYDPSRRPRFTEL 267
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 105/256 (41%), Gaps = 39/256 (15%)
Query: 48 CRRSAHQEMALIARVQHPYIVEFKEAWV---EKGCYVCIVTGYCEGGDMAELMKKSNGAY 104
C+R +E+ L+ HP I+ ++ +V E + + D+A+++
Sbjct: 73 CKRVL-REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVI 131
Query: 105 FPEEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA 164
P+ + + +LL + LH V+HRDL NI L + D+ + DF LA+ AD
Sbjct: 132 SPQH-IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK 190
Query: 165 SSVVGTPNYMCPELLADIPYGFKS--DIWSLGCCMYEMAAHRPAFKAFDMAGLISKIN-- 220
+ V Y PEL+ GF D+WS GC M EM + F+ ++KI
Sbjct: 191 THYVTHRWYRAPELVMQFK-GFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV 249
Query: 221 ---------------------RSSIGPLPS--------CYSPSLKTLIKGMLRKNPEHRP 251
R+S+ +P+ P LI ML NP+ R
Sbjct: 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309
Query: 252 SASELLKHPFLQHFVD 267
S + L+HP+ + D
Sbjct: 310 STEQALRHPYFESLFD 325
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 105/256 (41%), Gaps = 39/256 (15%)
Query: 48 CRRSAHQEMALIARVQHPYIVEFKEAWV---EKGCYVCIVTGYCEGGDMAELMKKSNGAY 104
C+R +E+ L+ HP I+ ++ +V E + + D+A+++
Sbjct: 73 CKRVL-REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVI 131
Query: 105 FPEEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA 164
P+ + + +LL + LH V+HRDL NI L + D+ + DF LA+ AD
Sbjct: 132 SPQH-IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK 190
Query: 165 SSVVGTPNYMCPELLADIPYGFKS--DIWSLGCCMYEMAAHRPAFKAFDMAGLISKIN-- 220
+ V Y PEL+ GF D+WS GC M EM + F+ ++KI
Sbjct: 191 THYVTHRWYRAPELVMQFK-GFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV 249
Query: 221 ---------------------RSSIGPLPS--------CYSPSLKTLIKGMLRKNPEHRP 251
R+S+ +P+ P LI ML NP+ R
Sbjct: 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309
Query: 252 SASELLKHPFLQHFVD 267
S + L+HP+ + D
Sbjct: 310 STEQALRHPYFESLFD 325
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 30/281 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ ++ + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFP-------------- 106
H +V A + G + ++T +C+ G+++ ++ + P
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 107 -EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDL 163
E +C F Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 138 LEHLICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 164 ASSVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISK 218
P +M PE + D Y +SD+WS G ++E+ A+ P K + +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRR 254
Query: 219 INRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ + P +P + + P RP+ SEL++H
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ D GLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 30/281 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ ++ + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFP-------------- 106
H +V A + G + ++T +C+ G+++ ++ + P
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 107 -EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDL 163
E +C F Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 138 LEHLICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 164 ASSVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISK 218
P +M PE + D Y +SD+WS G ++E+ A+ P K + +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRR 254
Query: 219 INRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ + P +P + + P RP+ SEL++H
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 30/281 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ ++ + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFP-------------- 106
H +V A + G + ++ +C+ G+++ ++ + P
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 107 -EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDL 163
E +C F Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 147 LEHLICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXV 205
Query: 164 ASSVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISK 218
P +M PE + D Y +SD+WS G ++E+ A+ P K + +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRR 263
Query: 219 INRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ + P +P + + P RP+ SEL++H
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 24/233 (10%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
MD++++ G+G FG L ++ +KK+ Q R R Q M +A + H
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVI---QDPRFRNRELQIMQDLAVLHH 78
Query: 65 PYIVEFKEAWVEKG------CYVCIVTGYCEGGDMAELMKKSNGAYF-----PEEKLCKW 113
P IV+ + + G Y+ +V Y + + + + Y+ P L K
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEY-----VPDTLHRCCRNYYRRQVAPPPILIKV 133
Query: 114 FA-QLLLAVDYLH--SNYVLHRDLKCSNIFLTK-DQDVRLGDFGLAKTLKADDLASSVVG 169
F QL+ ++ LH S V HRD+K N+ + + D ++L DFG AK L + + +
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC 193
Query: 170 TPNYMCPELL-ADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINR 221
+ Y PEL+ + Y DIWS+GC EM P F+ + AG + +I R
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVR 246
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 11/219 (5%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IVT Y G + + +K G Y +L
Sbjct: 311 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 368
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
AQ+ + Y+ +HRDL+ +NI + ++ ++ DFGLA+ ++ ++ A P
Sbjct: 369 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 428
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 429 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 488
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQY 269
SL L+ RK PE RP+ +LQ F++ Y
Sbjct: 489 CPESLHDLMCQCWRKEPEERPT------FEYLQAFLEDY 521
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 77.4 bits (189), Expect = 4e-14, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IV Y G + + +K G Y +L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
AQ+ + Y+ +HRDL+ +NI + ++ ++ DFGLA+ ++ ++ A P
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPA 276
SL L+ RK+PE RP+ L FL+ + P + P
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQPG 283
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ D GLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 13/269 (4%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
+++E++G G FG + + K ++ +Q + E L+ ++QH +V
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTKV----AVKSLKQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
++ Y I+T Y E G + + +K +G KL AQ+ + ++
Sbjct: 72 RLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYG 185
+HRDL+ +NI ++ ++ DFGLA+ ++ D+ ++ G + PE + +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 186 FKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLR 244
KSD+WS G + E+ H R + +I + R P L L++ +
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 248
Query: 245 KNPEHRPSASEL--LKHPFLQHFVDQYRP 271
+ PE RP+ L + F QY+P
Sbjct: 249 ERPEDRPTFDYLRSVLEDFFTATEGQYQP 277
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 30/281 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ ++ + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFP-------------- 106
H +V A + G + ++ +C+ G+++ ++ + P
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 107 -EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDL 163
E +C F Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 138 LEHLICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 164 ASSVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISK 218
P +M PE + D Y +SD+WS G ++E+ A+ P K + +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRR 254
Query: 219 INRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ + P +P + + P RP+ SEL++H
Sbjct: 255 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 13 QIGRGAFGAAI--LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
++G G FG VN+ K + + + TE ++ QE+ ++A+ QH +VE
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT--TEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 71 KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAY-FPEEKLCKWFAQLLLAVDYLHSNYV 129
+ G +C+V Y G + + + +G CK +++LH N+
Sbjct: 96 L-GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKT---LKADDLASSVVGTPNYMCPELL-ADI-PY 184
+HRD+K +NI L + ++ DFGLA+ + S +VGT YM PE L +I P
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEITP- 213
Query: 185 GFKSDIWSLGCCMYEMAAHRPA 206
KSDI+S G + E+ PA
Sbjct: 214 --KSDIYSFGVVLLEIITGLPA 233
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y+ + +G GA+G+ + +KK+ Q+ + ++E+ L+ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 66 YIVEFKEAW-----VEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
++ + + +E+ V +VT + G D+ ++K ++ + Q+L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVT-HLMGADLNNIVKCQK---LTDDHVQFLIYQILRG 137
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLA 180
+ Y+HS ++HRDLK SN+ + +D ++++ D GLA+ DD + V T Y PE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMTGYVATRWYRAPEIML 195
Query: 181 D-IPYGFKSDIWSLGCCMYEMAAHRPAFKAFDM---------------AGLISKIN---- 220
+ + Y DIWS+GC M E+ R F D A L+ KI+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 255
Query: 221 RSSIGPLPSC-----------YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVD 267
R+ I L +P L++ ML + + R +A++ L H + + D
Sbjct: 256 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 12/263 (4%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTER--CRRSAHQEMALIAR 61
+D ++I +G+G FG L R ++ K+++ K+ Q E+ +E+ + +
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLA--REKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH 70
Query: 62 VQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAV 121
++HP I+ + ++ ++ G EL K F E++ + +L A+
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADAL 127
Query: 122 DYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTPNYMCPELLA 180
Y H V+HRD+K N+ + ++++ DFG ++ A L + GT +Y+ PE++
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIK 240
+ K D+W G YE P F + +I + P S K LI
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL-KFPPFLSDGSKDLIS 244
Query: 241 GMLRKNPEHRPSASELLKHPFLQ 263
+LR +P R +++HP+++
Sbjct: 245 KLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 30/281 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ ++ + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFP-------------- 106
H +V A + G + ++ +C+ G+++ ++ + P
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 107 -EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDL 163
E +C F Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 184 LEHLICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 242
Query: 164 ASSVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISK 218
P +M PE + D Y +SD+WS G ++E+ A+ P K + +
Sbjct: 243 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRR 300
Query: 219 INRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ + P +P + + P RP+ SEL++H
Sbjct: 301 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 30/281 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ ++ + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFP-------------- 106
H +V A + G + ++ +C+ G+++ ++ + P
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 107 -EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDL 163
E +C F Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 149 LEHLICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 207
Query: 164 ASSVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISK 218
P +M PE + D Y +SD+WS G ++E+ A+ P K + +
Sbjct: 208 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRR 265
Query: 219 INRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ + P +P + + P RP+ SEL++H
Sbjct: 266 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 120/281 (42%), Gaps = 30/281 (10%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ ++ + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFP-------------- 106
H +V A + G + ++ +C+ G+++ ++ + P
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 107 -EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDL 163
E +C F Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 147 LEHLICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 205
Query: 164 ASSVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISK 218
P +M PE + D Y +SD+WS G ++E+ A+ P K + +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRR 263
Query: 219 INRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ + P +P + + P RP+ SEL++H
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 11/252 (4%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
+++E++G G FG + + K ++ +Q + E L+ ++QH +V
Sbjct: 25 KLVERLGAGQFGEVWMGYYNGHTKV----AVKSLKQGSMSPDAFLAEANLMKQLQHQRLV 80
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
++ Y I+T Y E G + + +K +G KL AQ+ + ++
Sbjct: 81 RLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 138
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYG 185
+HRDL+ +NI ++ ++ DFGLA+ ++ D+ ++ G + PE + +
Sbjct: 139 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 186 FKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLR 244
KSD+WS G + E+ H R + +I + R P L L++ +
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 257
Query: 245 KNPEHRPSASEL 256
+ PE RP+ L
Sbjct: 258 ERPEDRPTFDYL 269
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 9 EIMEQIGRGAFGAAILVNH--RAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
+ ++Q+G+G FG+ + + + V+ +L TE R +E+ ++ +QH
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 67 IVEFKEAWVEKGCY------VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
IV++K CY + ++ Y G + + ++K KL ++ +Q+
Sbjct: 74 IVKYKGV-----CYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKG 127
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----YMC 175
++YL + +HR+L NI + + V++GDFGL K L D V P +
Sbjct: 128 MEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDK-EYYKVKEPGESPIFWYA 186
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAH 203
PE L + + SD+WS G +YE+ +
Sbjct: 187 PESLTESKFSVASDVWSFGVVLYELFTY 214
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 125/302 (41%), Gaps = 53/302 (17%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR 61
E R Y + IG G+FG + E + +KK+ + +R ++E+ ++
Sbjct: 36 EQREIAYTNCKVIGNGSFGV-VFQAKLVESDEVAIKKVL------QDKRFKNRELQIMRI 88
Query: 62 VQHPYIVEFKEAWVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKL 110
V+HP +V+ K + G ++ +V Y + E + +++ Y P +
Sbjct: 89 VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY-----VPETVYRASRHYAKLKQTMPMLLI 143
Query: 111 CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVG 169
+ QLL ++ Y+HS + HRD+K N+ L V +L DFG AK L A + S +
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC 203
Query: 170 TPNYMCPELL-ADIPYGFKSDIWSLGCCMYEMAAHRPAF-------KAFDMAGLISKINR 221
+ Y PEL+ Y DIWS GC M E+ +P F + ++ ++ +R
Sbjct: 204 SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSR 263
Query: 222 SSIGPLPSCYS---------------------PSLKTLIKGMLRKNPEHRPSASELLKHP 260
I + Y P LI +L P R +A E L HP
Sbjct: 264 EQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHP 323
Query: 261 FL 262
F
Sbjct: 324 FF 325
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 115/261 (44%), Gaps = 10/261 (3%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
E + ++ E+ IG G FG + + + + I+ + ++ R QE +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 60 ARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ HP+IV+ E V I+ C G++ ++ + L + QL
Sbjct: 66 RQFDHPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLST 122
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT--PNYMCPE 177
A+ YL S +HRD+ N+ ++ V+LGDFGL++ ++ + G +M PE
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSL 235
+ + SD+W G CM+E+ H +P F+ +I +I P+P P+L
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIENGERLPMPPNCPPTL 241
Query: 236 KTLIKGMLRKNPEHRPSASEL 256
+L+ +P RP +EL
Sbjct: 242 YSLMTKCWAYDPSRRPRFTEL 262
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IV Y G + + +K G Y +L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM 119
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
AQ+ + Y+ +HRDL+ +NI + ++ ++ DFGLA+ ++ ++ A P
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPA 276
SL L+ RK+PE RP+ L FL+ + P + P
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQPG 283
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 9/251 (3%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
+++E++G G FG + + K ++ +Q + E L+ ++QH +V
Sbjct: 22 KLVERLGAGQFGEVWMGYYNGHTKV----AVKSLKQGSMSPDAFLAEANLMKQLQHQRLV 77
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
++ Y I+T Y E G + + +K +G KL AQ+ + ++
Sbjct: 78 RLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADIPYGF 186
+HRDL+ +NI ++ ++ DFGLA+ ++ ++ A P + PE + +
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 195
Query: 187 KSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
KSD+WS G + E+ H R + +I + R P L L++ ++
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 255
Query: 246 NPEHRPSASEL 256
PE RP+ L
Sbjct: 256 RPEDRPTFDYL 266
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IVT Y G + + +K G Y +L
Sbjct: 228 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
AQ+ + Y+ +HRDL+ +NI + ++ ++ DFGLA+ ++ ++ A P
Sbjct: 286 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 345
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 405
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPA 276
SL L+ RK PE RP+ L FL+ + P + P
Sbjct: 406 CPESLHDLMCQCWRKEPEERPTFEYL--QAFLEDYFTSTEPQYQPG 449
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 120/261 (45%), Gaps = 17/261 (6%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALIARVQHPY 66
+I + IG G FG + + K+ + I+ + TE+ RR E +++ + HP
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
++ E V K V I+T + E G + +++++G F +L + + YL
Sbjct: 70 VIHL-EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKYLAD 127
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK---ADDLASSVVGTP---NYMCPELLA 180
+HR L NI + + ++ DFGL++ L+ +D +S +G + PE +
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 181 DIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAG--LISKINRSSIGPLPSCYSPSLK 236
+ SD+WS G M+E+ ++ RP +DM +I+ I + P P +L
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERP---YWDMTNQDVINAIEQDYRLPPPMDCPSALH 244
Query: 237 TLIKGMLRKNPEHRPSASELL 257
L+ +K+ HRP +++
Sbjct: 245 QLMLDCWQKDRNHRPKFGQIV 265
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 9/251 (3%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
+++E++G G FG + + K ++ +Q + E L+ ++QH +V
Sbjct: 21 KLVERLGAGQFGEVWMGYYNGHTKV----AVKSLKQGSMSPDAFLAEANLMKQLQHQRLV 76
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
++ Y I+T Y E G + + +K +G KL AQ+ + ++
Sbjct: 77 RLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 134
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADIPYGF 186
+HRDL+ +NI ++ ++ DFGLA+ ++ ++ A P + PE + +
Sbjct: 135 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 194
Query: 187 KSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
KSD+WS G + E+ H R + +I + R P L L++ ++
Sbjct: 195 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 254
Query: 246 NPEHRPSASEL 256
PE RP+ L
Sbjct: 255 RPEDRPTFDYL 265
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 7/226 (3%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IVT Y G + + +K G Y +L
Sbjct: 62 QEAQVMKKIRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
AQ+ + Y+ +HRDL+ +NI + ++ ++ DFGLA+ ++ ++ A P
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPA 276
SL L+ RK+PE RP+ L FL+ + P + P
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQPG 283
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 11/252 (4%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
+++E++G G FG + + K ++ +Q + E L+ ++QH +V
Sbjct: 18 KLVERLGAGQFGEVWMGYYNGHTKV----AVKSLKQGSMSPDAFLAEANLMKQLQHQRLV 73
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
++ Y I+T Y E G + + +K +G KL AQ+ + ++
Sbjct: 74 RLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 131
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYG 185
+HRDL+ +NI ++ ++ DFGLA+ ++ D+ ++ G + PE + +
Sbjct: 132 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFT 190
Query: 186 FKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLR 244
KSD+WS G + E+ H R + +I + R P L L++ +
Sbjct: 191 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 250
Query: 245 KNPEHRPSASEL 256
+ PE RP+ L
Sbjct: 251 ERPEDRPTFDYL 262
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 115/267 (43%), Gaps = 11/267 (4%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
++G+G FG + + I+ + + QE ++ +++H +V+
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRV----AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 71
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
E+ Y IVT Y G + + +K G Y +L AQ+ + Y+ +HR
Sbjct: 72 VVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 129
Query: 133 DLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADIPYGFKSDI 190
DL+ +NI + ++ ++ DFGLA+ ++ ++ A P + PE + KSD+
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 191 WSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEH 249
WS G + E+ R + ++ ++ R P P SL L+ RK+PE
Sbjct: 190 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEE 249
Query: 250 RPSASELLKHPFLQHFVDQYRPTFPPA 276
RP+ L FL+ + P + P
Sbjct: 250 RPTFEYL--QAFLEDYFTSTEPQYQPG 274
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 34/250 (13%)
Query: 6 DQYEIMEQIGRGAFGAAI-LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
++YEI+ +G G FG + V+HR + LK I+ E+ + +A E+ ++ ++
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIK---NVEKYKEAARLEINVLEKINE 89
Query: 65 P------YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
V+ + W + ++CI G + +K +N +P ++ QL
Sbjct: 90 KDPDNKNLCVQMFD-WFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQLC 147
Query: 119 LAVDYLHSNYVLHRDLKCSNI-FLTKDQD------------------VRLGDFGLAKTLK 159
AV +LH N + H DLK NI F+ D + VR+ DFG A
Sbjct: 148 QAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF-- 205
Query: 160 ADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI 219
+ S++V T +Y PE++ ++ + D+WS+GC ++E F+ D ++ +
Sbjct: 206 DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMM 265
Query: 220 NRSSIGPLPS 229
R +GP+PS
Sbjct: 266 ER-ILGPIPS 274
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 34/248 (13%)
Query: 7 QYEIMEQIGRGAFGAAI-LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
+YEI++ +G GAFG + ++H+A + +K + + +R +A E+ ++ +
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVK---IVKNVDRYCEAARSEIQVLEHLNTT 71
Query: 66 ------YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
V+ E W E ++CIV G + +K++ F + + K Q+
Sbjct: 72 DPNSTFRCVQMLE-WFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQ-------------------DVRLGDFGLAKTLKA 160
+V++LHSN + H DLK NI + D+++ DFG A
Sbjct: 130 SVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--D 187
Query: 161 DDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKIN 220
D+ S++V T +Y PE++ + + D+WS+GC + E F D ++ +
Sbjct: 188 DEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMME 247
Query: 221 RSSIGPLP 228
R +GPLP
Sbjct: 248 R-ILGPLP 254
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 14/202 (6%)
Query: 13 QIGRGAFGAAI--LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
++G G FG VN+ K + + + TE ++ QE+ ++A+ QH +VE
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT--TEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 71 KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAY-FPEEKLCKWFAQLLLAVDYLHSNYV 129
+ G +C+V Y G + + + +G CK +++LH N+
Sbjct: 96 L-GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKT---LKADDLASSVVGTPNYMCPELL-ADI-PY 184
+HRD+K +NI L + ++ DFGLA+ + +VGT YM PE L +I P
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEITP- 213
Query: 185 GFKSDIWSLGCCMYEMAAHRPA 206
KSDI+S G + E+ PA
Sbjct: 214 --KSDIYSFGVVLLEIITGLPA 233
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 9/251 (3%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
+++E++G G FG + + K ++ +Q + E L+ ++QH +V
Sbjct: 11 KLVERLGAGQFGEVWMGYYNGHTKV----AVKSLKQGSMSPDAFLAEANLMKQLQHQRLV 66
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
++ Y I+T Y E G + + +K +G KL AQ+ + ++
Sbjct: 67 RLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 124
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADIPYGF 186
+HRDL+ +NI ++ ++ DFGLA+ ++ ++ A P + PE + +
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 184
Query: 187 KSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
KSD+WS G + E+ H R + +I + R P L L++ ++
Sbjct: 185 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 244
Query: 246 NPEHRPSASEL 256
PE RP+ L
Sbjct: 245 RPEDRPTFDYL 255
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 75.5 bits (184), Expect = 2e-13, Method: Composition-based stats.
Identities = 79/333 (23%), Positives = 139/333 (41%), Gaps = 82/333 (24%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
+ + ++ ++G G FG +L H KK Y +K + R ++ RSA E ++ ++Q+
Sbjct: 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVK---VVRNIKKYTRSAKIEADILKKIQND 91
Query: 66 YI-----VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
I V++ ++ ++C++ G + E++ ++N F E + + ++L A
Sbjct: 92 DINNNNIVKYHGKFMYYD-HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKA 149
Query: 121 VDYLHSNYVLHRDLKCSNIFL-------------------------TKDQDVRLGDFGLA 155
++YL + H DLK NI L TK ++L DFG A
Sbjct: 150 LNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCA 209
Query: 156 KTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFD---- 211
T K+D S++ T Y PE++ ++ + SD+WS GC + E+ F+ +
Sbjct: 210 -TFKSD-YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEH 267
Query: 212 ---MAGLISKI----------------------------NRSSIGPLPSCYS--PSLKTL 238
M +I I N SSI + P K +
Sbjct: 268 LAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKII 327
Query: 239 --------IKGMLRKNPEHRPSASELLKHPFLQ 263
+ +L+ +P RPS +ELLKH FL+
Sbjct: 328 KHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 116/272 (42%), Gaps = 13/272 (4%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
++++++G G FG + K I+ + S +E ++ +++H +V
Sbjct: 12 QLIKRLGNGQFGEVWMGTWNGNTKV----AIKTLKPGTMSPESFLEEAQIMKKLKHDKLV 67
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
+ E+ Y IVT Y G + + +K G L AQ+ + Y+
Sbjct: 68 QLYAVVSEEPIY--IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN 125
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYG 185
+HRDL+ +NI + ++ DFGLA+ ++ D+ ++ G + PE +
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFT 184
Query: 186 FKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLR 244
KSD+WS G + E+ R + + ++ ++ R P P SL L+ +
Sbjct: 185 IKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWK 244
Query: 245 KNPEHRPSASELLKHPFLQHFVDQYRPTFPPA 276
K+PE RP+ L FL+ + P + P
Sbjct: 245 KDPEERPTFEYL--QSFLEDYFTATEPQYQPG 274
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 11/252 (4%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
+++E++G G FG + + K ++ +Q + E L+ ++QH +V
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTKV----AVKSLKQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
++ Y I+T Y E G + + +K +G KL AQ+ + ++
Sbjct: 72 RLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYG 185
+HRDL+ +NI ++ ++ DFGLA+ ++ D+ ++ G + PE + +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 186 FKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLR 244
KSD+WS G + E+ H R + +I + R P L L++ +
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 248
Query: 245 KNPEHRPSASEL 256
+ PE RP+ L
Sbjct: 249 ERPEDRPTFDYL 260
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 11/252 (4%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
+++E++G G FG + + K ++ +Q + E L+ ++QH +V
Sbjct: 17 KLVERLGAGQFGEVWMGYYNGHTKV----AVKSLKQGSMSPDAFLAEANLMKQLQHQRLV 72
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
++ Y I+T Y E G + + +K +G KL AQ+ + ++
Sbjct: 73 RLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 130
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYG 185
+HRDL+ +NI ++ ++ DFGLA+ ++ D+ ++ G + PE + +
Sbjct: 131 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFT 189
Query: 186 FKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLR 244
KSD+WS G + E+ H R + +I + R P L L++ +
Sbjct: 190 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 249
Query: 245 KNPEHRPSASEL 256
+ PE RP+ L
Sbjct: 250 ERPEDRPTFDYL 261
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 13/253 (5%)
Query: 14 IGRGAFGAAILVNHRAEKKK---YVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
IG G FG + K+ +K +++ TE+ RR E +++ + HP I+
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 71 KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVL 130
E V K V IVT Y E G + +KK++G F +L + + YL +
Sbjct: 89 -EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 131 HRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADIPYGF 186
HRDL NI + + ++ DFGL++ L+ D + A + G + PE +A +
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTS 206
Query: 187 KSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLR 244
SD+WS G M+E+ ++ RP ++ + +I + P P +L L+ +
Sbjct: 207 ASDVWSYGIVMWEVVSYGERPYWEMTN-QDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQ 265
Query: 245 KNPEHRPSASELL 257
K RP E++
Sbjct: 266 KERNSRPKFDEIV 278
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 18/254 (7%)
Query: 14 IGRGAFGA---AILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
+G G FG + NH+ EK +K + T + E ++ + HP+IV+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCK-KDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 71 KEAWVEKGCYVCI-VTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
E+ ++ + + Y E G E K S L + Q+ A+ YL S
Sbjct: 91 IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL----TLVLYSLQICKAMAYLESINC 146
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTP-NYMCPELLADIPYGFK 187
+HRD+ NI + + V+LGDFGL++ ++ +D +SV P +M PE + +
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 206
Query: 188 SDIWSLGCCMYEMAAH--RPAF--KAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGML 243
SD+W CM+E+ + +P F + D+ G++ K +R P P P L TL+
Sbjct: 207 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRL---PKPDLCPPVLYTLMTRCW 263
Query: 244 RKNPEHRPSASELL 257
+P RP +EL+
Sbjct: 264 DYDPSDRPRFTELV 277
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 14/202 (6%)
Query: 13 QIGRGAFGAAI--LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
++G G FG VN+ K + + + TE ++ QE+ ++A+ QH +VE
Sbjct: 32 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT--TEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 71 KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAY-FPEEKLCKWFAQLLLAVDYLHSNYV 129
+ G +C+V Y G + + + +G CK +++LH N+
Sbjct: 90 L-GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 148
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKT---LKADDLASSVVGTPNYMCPELL-ADI-PY 184
+HRD+K +NI L + ++ DFGLA+ + +VGT YM PE L +I P
Sbjct: 149 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEITP- 207
Query: 185 GFKSDIWSLGCCMYEMAAHRPA 206
KSDI+S G + E+ PA
Sbjct: 208 --KSDIYSFGVVLLEIITGLPA 227
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 11/225 (4%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IVT Y G + + +K G Y +L
Sbjct: 228 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
AQ+ + Y+ +HRDL+ +NI + ++ ++ DFGLA+ ++ ++ A P
Sbjct: 286 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 345
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 405
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPP 275
SL L+ RK PE RP+ +LQ F++ Y + P
Sbjct: 406 CPESLHDLMCQCWRKEPEERPT------FEYLQAFLEDYFTSTEP 444
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 9/251 (3%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
+++E++G G FG + + K ++ +Q + E L+ ++QH +V
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHTKV----AVKSLKQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
++ Y I+T Y E G + + +K +G KL AQ+ + ++
Sbjct: 72 RLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADIPYGF 186
+HRDL+ +NI ++ ++ DFGLA+ ++ ++ A P + PE + +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 187 KSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
KSD+WS G + E+ H R + +I + R P L L++ ++
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 249
Query: 246 NPEHRPSASEL 256
PE RP+ L
Sbjct: 250 RPEDRPTFDYL 260
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 18/254 (7%)
Query: 14 IGRGAFGA---AILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
+G G FG + NH+ EK +K + T + E ++ + HP+IV+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCK-KDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 71 KEAWVEKGCYVCI-VTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
E+ ++ + + Y E G E K S L + Q+ A+ YL S
Sbjct: 75 IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL----TLVLYSLQICKAMAYLESINC 130
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTP-NYMCPELLADIPYGFK 187
+HRD+ NI + + V+LGDFGL++ ++ +D +SV P +M PE + +
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 190
Query: 188 SDIWSLGCCMYEMAAH--RPAF--KAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGML 243
SD+W CM+E+ + +P F + D+ G++ K +R P P P L TL+
Sbjct: 191 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRL---PKPDLCPPVLYTLMTRCW 247
Query: 244 RKNPEHRPSASELL 257
+P RP +EL+
Sbjct: 248 DYDPSDRPRFTELV 261
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPYIVEFK 71
+G G FG + KK + I+ + TE+ RR E +++ + HP I+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
E V K V IVT Y E G + ++K + A F +L + + YL +H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADIPYGFK 187
RDL NI + + ++ DFGLA+ L+ D + A + G + PE +A +
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 188 SDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
SD+WS G ++E+ ++ RP ++ + +I ++ P P +L L+ +K
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 246 NPEHRPSASELL 257
+ +RP +++
Sbjct: 290 DRNNRPKFEQIV 301
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 11/268 (4%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
+++E++G G G + + K ++ +Q + E L+ ++QH +V
Sbjct: 16 KLVERLGAGQAGEVWMGYYNGHTKV----AVKSLKQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
++ Y I+T Y E G + + +K +G KL AQ+ + ++
Sbjct: 72 RLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK-ADDLASSVVGTP-NYMCPELLADIPYGF 186
+HRDL+ +NI ++ ++ DFGLA+ ++ A+ A P + PE + +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 187 KSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
KSD+WS G + E+ H R + +I + R P L L++ ++
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 249
Query: 246 NPEHRPSASEL--LKHPFLQHFVDQYRP 271
PE RP+ L + F QY+P
Sbjct: 250 RPEDRPTFDYLRSVLEDFFTATEGQYQP 277
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 13/268 (4%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
++G+G FG + + I+ + + QE ++ +++H +V+
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRV----AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 70
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
E+ + IVT Y G + + +K G Y +L AQ+ + Y+ +HR
Sbjct: 71 VVSEEP--IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 128
Query: 133 DLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYGFKSD 189
DL+ +NI + ++ ++ DFGLA+ ++ D+ ++ G + PE + KSD
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 190 IWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPE 248
+WS G + E+ R + ++ ++ R P P SL L+ RK PE
Sbjct: 188 VWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPE 247
Query: 249 HRPSASELLKHPFLQHFVDQYRPTFPPA 276
RP+ L FL+ + P + P
Sbjct: 248 ERPTFEYL--QAFLEDYFTSTEPQYQPG 273
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 18/254 (7%)
Query: 14 IGRGAFGA---AILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
+G G FG + NH+ EK +K + T + E ++ + HP+IV+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCK-KDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 71 KEAWVEKGCYVCI-VTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
E+ ++ + + Y E G E K S L + Q+ A+ YL S
Sbjct: 79 IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL----TLVLYSLQICKAMAYLESINC 134
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA-SSVVGTP-NYMCPELLADIPYGFK 187
+HRD+ NI + + V+LGDFGL++ ++ +D +SV P +M PE + +
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 194
Query: 188 SDIWSLGCCMYEMAAH--RPAF--KAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGML 243
SD+W CM+E+ + +P F + D+ G++ K +R P P P L TL+
Sbjct: 195 SDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRL---PKPDLCPPVLYTLMTRCW 251
Query: 244 RKNPEHRPSASELL 257
+P RP +EL+
Sbjct: 252 DYDPSDRPRFTELV 265
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 125/268 (46%), Gaps = 10/268 (3%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
++Y I E +GRG FG + KK Y+ K +++ + T++ +E++++ +H
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVL--VKKEISILNIARHR 61
Query: 66 YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLH 125
I+ E++ E + ++ + G D+ E + S E ++ + Q+ A+ +LH
Sbjct: 62 NILHLHESF-ESMEELVMIFEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLH 119
Query: 126 SNYVLHRDLKCSNIFLT--KDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIP 183
S+ + H D++ NI + +++ +FG A+ LK D + P Y PE+
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDV 179
Query: 184 YGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCY---SPSLKTLIK 240
+D+WSLG +Y + + F A +I I + + S +
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVD 239
Query: 241 GMLRKNPEHRPSASELLKHPFLQHFVDQ 268
+L K + R +ASE L+HP+L+ +++
Sbjct: 240 RLLVKERKSRMTASEALQHPWLKQKIER 267
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 32/249 (12%)
Query: 6 DQYEIMEQIGRGAFGAAI-LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV-- 62
++YEI+ +G G FG + ++H K + LK IR + R +A E+ ++ ++
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR---NVGKYREAARLEINVLKKIKE 107
Query: 63 ---QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
++ ++ W ++CI G + E +K++N +P + QL
Sbjct: 108 KDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCH 166
Query: 120 AVDYLHSNYVLHRDLKCSNIFLT-------------------KDQDVRLGDFGLAKTLKA 160
A+ +LH N + H DLK NI K+ +R+ DFG A
Sbjct: 167 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--D 224
Query: 161 DDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKIN 220
+ +++V T +Y PE++ ++ + D+WS+GC ++E F+ + + +
Sbjct: 225 HEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 284
Query: 221 RSSIGPLPS 229
+ +GP+PS
Sbjct: 285 K-ILGPIPS 292
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 8/206 (3%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
M+ Y ++++G G + + LK+IRL + E +A +E++L+ ++H
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKH 59
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
IV + + + +V Y + D+ + + G + + QLL + Y
Sbjct: 60 ANIVTLHDI-IHTEKSLTLVFEYLDK-DLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYC 116
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGL--AKTLKADDLASSVVGTPNYMCPE-LLAD 181
H VLHRDLK N+ + + +++L DFGL AK++ + VV T Y P+ LL
Sbjct: 117 HRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGS 175
Query: 182 IPYGFKSDIWSLGCCMYEMAAHRPAF 207
Y + D+W +GC YEMA RP F
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATGRPLF 201
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 32/249 (12%)
Query: 6 DQYEIMEQIGRGAFGAAI-LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV-- 62
++YEI+ +G G FG + ++H K + LK IR + R +A E+ ++ ++
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR---NVGKYREAARLEINVLKKIKE 84
Query: 63 ---QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
++ ++ W ++CI G + E +K++N +P + QL
Sbjct: 85 KDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCH 143
Query: 120 AVDYLHSNYVLHRDLKCSNIFLT-------------------KDQDVRLGDFGLAKTLKA 160
A+ +LH N + H DLK NI K+ +R+ DFG A
Sbjct: 144 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--D 201
Query: 161 DDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKIN 220
+ +++V T +Y PE++ ++ + D+WS+GC ++E F+ + + +
Sbjct: 202 HEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 261
Query: 221 RSSIGPLPS 229
+ +GP+PS
Sbjct: 262 K-ILGPIPS 269
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 9/251 (3%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
+++E++G G FG + + K ++ +Q + E L+ ++QH +V
Sbjct: 12 KLVERLGAGQFGEVWMGYYNGHTKV----AVKSLKQGSMSPDAFLAEANLMKQLQHQRLV 67
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
++ Y I+T Y E G + + +K +G KL AQ+ + ++
Sbjct: 68 RLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 125
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADIPYGF 186
+HR+L+ +NI ++ ++ DFGLA+ ++ ++ A P + PE + +
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 185
Query: 187 KSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
KSD+WS G + E+ H R + +I + R P L L++ ++
Sbjct: 186 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 245
Query: 246 NPEHRPSASEL 256
PE RP+ L
Sbjct: 246 RPEDRPTFDYL 256
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 32/249 (12%)
Query: 6 DQYEIMEQIGRGAFGAAI-LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV-- 62
++YEI+ +G G FG + ++H K + LK IR + R +A E+ ++ ++
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIR---NVGKYREAARLEINVLKKIKE 75
Query: 63 ---QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
++ ++ W ++CI G + E +K++N +P + QL
Sbjct: 76 KDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCH 134
Query: 120 AVDYLHSNYVLHRDLKCSNIFLT-------------------KDQDVRLGDFGLAKTLKA 160
A+ +LH N + H DLK NI K+ +R+ DFG A
Sbjct: 135 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--D 192
Query: 161 DDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKIN 220
+ +++V T +Y PE++ ++ + D+WS+GC ++E F+ + + +
Sbjct: 193 HEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 252
Query: 221 RSSIGPLPS 229
+ +GP+PS
Sbjct: 253 K-ILGPIPS 260
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 73.9 bits (180), Expect = 5e-13, Method: Composition-based stats.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
Query: 54 QEMALIARVQHPYIVEF-KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK 112
+E A++ ++HP +V+ +E Y IVT Y G++ + +++ N L
Sbjct: 77 KEAAVMKEIKHPNLVQLLGVCTLEPPFY--IVTEYMPYGNLLDYLRECNREEVTAVVLLY 134
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP 171
Q+ A++YL +HRDL N + ++ V++ DFGL++ + D A + P
Sbjct: 135 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFP 194
Query: 172 -NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPS 229
+ PE LA + KSD+W+ G ++E+A + + D++ + + + P
Sbjct: 195 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPE 254
Query: 230 CYSPSLKTLIKGMLRKNPEHRPSASE 255
P + L++ + +P RPS +E
Sbjct: 255 GCPPKVYELMRACWKWSPADRPSFAE 280
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 15/266 (5%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
++G+G FG + + I+ + + QE ++ +++H +V+
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRV----AIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYA 247
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHR 132
E+ Y IVT Y G + + +K G Y +L AQ+ + Y+ +HR
Sbjct: 248 VVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 305
Query: 133 DLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADIPYGFKSDI 190
DL+ +NI + ++ ++ DFGL + ++ ++ A P + PE + KSD+
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 191 WSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEH 249
WS G + E+ R + ++ ++ R P P SL L+ RK+PE
Sbjct: 366 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEE 425
Query: 250 RPSASELLKHPFLQHFVDQYRPTFPP 275
RP+ +LQ F++ Y + P
Sbjct: 426 RPT------FEYLQAFLEDYFTSTEP 445
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPYIVEFK 71
+G G FG + KK + I+ + TE+ RR E +++ + HP I+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
E V K V IVT Y E G + ++K + A F +L + + YL +H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGFVH 170
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADIPYGFK 187
RDL NI + + ++ DFGL++ L+ D + A + G + PE +A +
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 188 SDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
SD+WS G ++E+ ++ RP ++ + +I ++ P P +L L+ +K
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 246 NPEHRPSASELL 257
+ +RP +++
Sbjct: 290 DRNNRPKFEQIV 301
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 65/257 (25%), Positives = 107/257 (41%), Gaps = 47/257 (18%)
Query: 49 RRSAHQEMALIARVQHPYIVEFKEAWVEKGC-YVCIVTGYCEGGDMAELMKKSNGAYFPE 107
R QE+ ++ + H +I+++K + G + +V Y G + + Y P
Sbjct: 77 RSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRD--------YLPR 128
Query: 108 EKLCKWFAQLLL-------AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA 160
+ AQLLL + YLH+ + +HRDL N+ L D+ V++GDFGLAK +
Sbjct: 129 HSIG--LAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186
Query: 161 --------DDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-----RPAF 207
+D S V + PE L + + + SD+WS G +YE+ H P
Sbjct: 187 GHEXYRVREDGDSPVF----WYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT 242
Query: 208 KAFDMAG----------LISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELL 257
K ++ G L + R P P + L+K RP+ L+
Sbjct: 243 KFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLI 302
Query: 258 KHPFLQHFVDQYRPTFP 274
P L+ ++Y+ P
Sbjct: 303 --PILKTVHEKYQGQAP 317
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 9/227 (3%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IV Y G + + +K G Y +L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP-- 171
AQ+ + Y+ +HRDL+ +NI + ++ ++ DFGLA+ ++ D+ ++ G
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFP 178
Query: 172 -NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPS 229
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
Query: 230 CYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPA 276
SL L+ RK+PE RP+ L FL+ + P + P
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQPG 283
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPYIVEFK 71
+G G FG + KK + I+ + TE+ RR E +++ + HP I+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
E V K V IVT Y E G + ++K + A F +L + + YL +H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADIPYGFK 187
RDL NI + + ++ DFGL++ L+ D + A + G + PE +A +
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 188 SDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
SD+WS G ++E+ ++ RP ++ + +I ++ P P +L L+ +K
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 246 NPEHRPSASELL 257
+ +RP +++
Sbjct: 290 DRNNRPKFEQIV 301
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IV Y G + + +K G Y +L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
AQ+ + Y+ +HRDL+ +NI + ++ ++ DFGLA+ ++ ++ A P
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPPA 276
SL L+ RK+PE RP+ L FL+ + P + P
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYL--QAFLEDYFTSTEPQYQPG 283
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPYIVEFK 71
+G G FG + KK + I+ + TE+ RR E +++ + HP I+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
E V K V IVT Y E G + ++K + A F +L + + YL +H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADIPYGFK 187
RDL NI + + ++ DFGL++ L+ D + A + G + PE +A +
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 188 SDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
SD+WS G ++E+ ++ RP ++ + +I ++ P P +L L+ +K
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 246 NPEHRPSASELL 257
+ +RP +++
Sbjct: 290 DRNNRPKFEQIV 301
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPYIVEFK 71
+G G FG + KK + I+ + TE+ RR E +++ + HP I+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
E V K V IVT Y E G + ++K + A F +L + + YL +H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADIPYGFK 187
RDL NI + + ++ DFGL++ L+ D + A + G + PE +A +
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 188 SDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
SD+WS G ++E+ ++ RP ++ + +I ++ P P +L L+ +K
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 246 NPEHRPSASELL 257
+ +RP +++
Sbjct: 290 DRNNRPKFEQIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPYIVEFK 71
+G G FG + KK + I+ + TE+ RR E +++ + HP I+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
E V K V IVT Y E G + ++K + A F +L + + YL +H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADIPYGFK 187
RDL NI + + ++ DFGL++ L+ D + A + G + PE +A +
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 188 SDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
SD+WS G ++E+ ++ RP ++ + +I ++ P P +L L+ +K
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 246 NPEHRPSASELL 257
+ +RP +++
Sbjct: 290 DRNNRPKFEQIV 301
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 11/252 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPYIVEFK 71
+G G FG + KK + I+ + TE+ RR E +++ + HP I+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
E V K V IVT Y E G + ++K + A F +L + + YL +H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADIPYGFK 187
RDL NI + + ++ DFGL + L+ D + A + G + PE +A +
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 188 SDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
SD+WS G ++E+ ++ RP ++ + +I ++ P P +L L+ +K
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 246 NPEHRPSASELL 257
+ +RP +++
Sbjct: 290 DRNNRPKFEQIV 301
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPYIVEFK 71
+G G FG + KK + I+ + TE+ RR E +++ + HP I+
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 109
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
E V K V IVT Y E G + ++K + A F +L + + YL +H
Sbjct: 110 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVH 168
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADIPYGFK 187
RDL NI + + ++ DFGL++ L+ D + A + G + PE +A +
Sbjct: 169 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 228
Query: 188 SDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
SD+WS G ++E+ ++ RP ++ + +I ++ P P +L L+ +K
Sbjct: 229 SDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQK 287
Query: 246 NPEHRPSASELL 257
+ +RP +++
Sbjct: 288 DRNNRPKFEQIV 299
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 13 QIGRGAFGAAILVNHRAEKKK--YVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
++GRG +G + K Y LK+I + SA +E+AL+ ++HP ++
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTGISMSACREIALLRELKHPNVISL 83
Query: 71 KEAWVEKG-CYVCIVTGYCEGGDMAELMK-----KSNG--AYFPEEKLCKWFAQLLLAVD 122
++ ++ V ++ Y E D+ ++K K+N P + Q+L +
Sbjct: 84 QKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142
Query: 123 YLHSNYVLHRDLKCSNIFLTKD----QDVRLGDFGLAKTLKA-----DDLASSVVGTPNY 173
YLH+N+VLHRDLK +NI + + V++ D G A+ + DL VV T Y
Sbjct: 143 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL-DPVVVTFWY 201
Query: 174 MCPELLADIPYGFKS-DIWSLGCCMYEMAAHRPAF 207
PELL + K+ DIW++GC E+ P F
Sbjct: 202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 34/248 (13%)
Query: 7 QYEIMEQIGRGAFGAAI-LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
+YEI++ +G GAFG + ++H+A + +K + + +R +A E+ ++ +
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVK---IVKNVDRYCEAARSEIQVLEHLNTT 71
Query: 66 ------YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
V+ E W E ++CIV G + +K++ F + + K Q+
Sbjct: 72 DPNSTFRCVQMLE-WFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQ-------------------DVRLGDFGLAKTLKA 160
+V++LHSN + H DLK NI + D+++ DFG A
Sbjct: 130 SVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--D 187
Query: 161 DDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKIN 220
D+ S++V +Y PE++ + + D+WS+GC + E F D ++ +
Sbjct: 188 DEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMME 247
Query: 221 RSSIGPLP 228
R +GPLP
Sbjct: 248 R-ILGPLP 254
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 15/259 (5%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRL--ARQTERCRRSAHQEMALIARVQHPY 66
+I + IG G FG + K+ + I+ A T++ RR E +++ + HP
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 91
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ E V K V I+T Y E G + ++K++G F +L + + YL
Sbjct: 92 IIHL-EGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGSGMKYLSD 149
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADI 182
+HRDL NI + + ++ DFG+++ L+ D + A + G + PE +A
Sbjct: 150 MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 209
Query: 183 PYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAG--LISKINRSSIGPLPSCYSPSLKTL 238
+ SD+WS G M+E+ ++ RP +DM+ +I I P P +L L
Sbjct: 210 KFTSASDVWSYGIVMWEVMSYGERP---YWDMSNQDVIKAIEEGYRLPPPMDCPIALHQL 266
Query: 239 IKGMLRKNPEHRPSASELL 257
+ +K RP +++
Sbjct: 267 MLDCWQKERSDRPKFGQIV 285
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 11/225 (4%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
QE ++ +++H +V+ E+ Y IV Y G + + +K G Y +L
Sbjct: 228 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVGEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
AQ+ + Y+ +HRDL+ +NI + ++ ++ DFGLA+ ++ ++ A P
Sbjct: 286 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 345
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE + KSD+WS G + E+ R + ++ ++ R P P
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 405
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQHFVDQYRPTFPP 275
SL L+ RK PE RP+ +LQ F++ Y + P
Sbjct: 406 CPESLHDLMCQCWRKEPEERPT------FEYLQAFLEDYFTSTEP 444
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 115/255 (45%), Gaps = 17/255 (6%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPY 66
+I E IG G FG +A KK I+ + TER RR E +++ + +HP
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 78
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ E V V I+T + E G + ++ ++G F +L + + YL
Sbjct: 79 IIRL-EGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIASGMRYLAE 136
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK---ADDLASSVVGTP---NYMCPELLA 180
+HRDL NI + + ++ DFGL++ L+ +D +S +G + PE +A
Sbjct: 137 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 181 DIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAG--LISKINRSSIGPLPSCYSPSLK 236
+ SD WS G M+E+ + RP +DM+ +I+ I + P P SL
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERP---YWDMSNQDVINAIEQDYRLPPPPDCPTSLH 253
Query: 237 TLIKGMLRKNPEHRP 251
L+ +K+ RP
Sbjct: 254 QLMLDCWQKDRNARP 268
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 6 DQYEIMEQIGRGAFGAAIL---VNHRAEKKKYVLK---KIRLARQTERCRRSAHQEMALI 59
D+ + + +G GAFG +L + +K V K K+ + TE+ EM ++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKS---------NGAYFPEEK 109
+ +H I+ A + G IV Y G++ E ++ N ++ PEE+
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVE-YASKGNLREYLQARRPPGLEFSFNPSHNPEEQ 146
Query: 110 L-------CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD 162
L C + Q+ ++YL S +HRDL N+ +T+D +++ DFGLA+ + D
Sbjct: 147 LSSKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 163 LASSVVGT---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGL 215
+M PE L D Y +SD+WS G ++E+ + P ++ L
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ + +R PS + L +++ P RP+ +L++
Sbjct: 265 LKEGHRMDK---PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 13 QIGRGAFGAAIL---VNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
++G GAFG L N E+ K ++ L ++ R+ H+E L+ +QH +IV+
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDM----------AELMKKSNG-AYFPEEKLCKWFAQLL 118
F VE G + +V Y + GD+ A LM + N + ++ Q+
Sbjct: 80 FYGVCVE-GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPNYMC 175
+ YL S + +HRDL N + ++ V++GDFG+++ + + D + + +M
Sbjct: 139 AGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMP 198
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSP 233
PE + + +SD+WSLG ++E+ + +P ++ + +I I + + P
Sbjct: 199 PESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-VIECITQGRVLQRPRTCPQ 257
Query: 234 SLKTLIKGMLRKNPEHRPSASELLKHPFLQHF 265
+ L+ G ++ P R + + H LQ+
Sbjct: 258 EVYELMLGCWQREPHMRKNIKGI--HTLLQNL 287
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPYIVEFK 71
+G G FG + KK + I+ + TE+ RR E +++ + HP I+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 82
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
E V K V IVT Y E G + ++K + A F +L + + YL +H
Sbjct: 83 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVH 141
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADIPYGFK 187
RDL NI + + ++ DFGL++ L+ D + A + G + PE +A +
Sbjct: 142 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 201
Query: 188 SDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
SD+WS G ++E+ ++ RP ++ + +I ++ P P +L L+ +K
Sbjct: 202 SDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQK 260
Query: 246 NPEHRPSASELL 257
+ +RP +++
Sbjct: 261 DRNNRPKFEQIV 272
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 36/283 (12%)
Query: 6 DQYEIMEQIGRGAFGAAILVN----HRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
D+ + + +G GAFG ++ + + K+ V +++ + TE+ EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYF-------PEEK 109
+ +H I+ A + G IV GY G++ E ++ G + PEE+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIV-GYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 L-------CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD 162
+ C + QL ++YL S +HRDL N+ +T++ +++ DFGLA+ + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 163 LASSVVGT---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGL 215
+M PE L D Y +SD+WS G M+E+ + P ++ L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ + +R P+ + L +++ P RP+ +L++
Sbjct: 272 LKEGHRMDK---PANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 11/252 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPYIVEFK 71
+G G FG + KK + I+ + TE+ RR E +++ + HP I+
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 99
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
E V K V IVT Y E G + ++K + A F +L + + YL +H
Sbjct: 100 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVH 158
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADIPYGFK 187
RDL NI + + ++ DFGL++ L+ D + A + G + PE +A +
Sbjct: 159 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 218
Query: 188 SDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
SD+WS G ++E+ ++ RP ++ + +I ++ P P +L L+ +K
Sbjct: 219 SDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQK 277
Query: 246 NPEHRPSASELL 257
+ +RP +++
Sbjct: 278 DRNNRPKFEQIV 289
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 14 IGRGAFGAAIL---VNHRAEKKKYVLK---KIRLARQTERCRRSAHQEMALIARV-QHPY 66
+G GAFG +L + +K V K K+ + TE+ EM ++ + +H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMK---------KSNGAYFPEEKL------- 110
I+ A + G IV Y G++ E ++ N ++ PEE+L
Sbjct: 85 IINLLGACTQDGPLYVIVE-YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 143
Query: 111 CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT 170
C + Q+ ++YL S +HRDL N+ +T+D +++ DFGLA+ + D
Sbjct: 144 CAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 171 ---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKINRSS 223
+M PE L D Y +SD+WS G ++E+ + P ++ L+ + +R
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 261
Query: 224 IGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
PS + L +++ P RP+ +L++
Sbjct: 262 K---PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 293
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 14 IGRGAFGAAIL---VNHRAEKKKYVLK---KIRLARQTERCRRSAHQEMALIARV-QHPY 66
+G GAFG +L + +K V K K+ + TE+ EM ++ + +H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMK---------KSNGAYFPEEKL------- 110
I+ A + G IV Y G++ E ++ N ++ PEE+L
Sbjct: 89 IINLLGACTQDGPLYVIVE-YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 147
Query: 111 CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT 170
C + Q+ ++YL S +HRDL N+ +T+D +++ DFGLA+ + D
Sbjct: 148 CAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 171 ---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKINRSS 223
+M PE L D Y +SD+WS G ++E+ + P ++ L+ + +R
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 265
Query: 224 IGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
PS + L +++ P RP+ +L++
Sbjct: 266 K---PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 297
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 14 IGRGAFGAAIL---VNHRAEKKKYVLK---KIRLARQTERCRRSAHQEMALIARV-QHPY 66
+G GAFG +L + +K V K K+ + TE+ EM ++ + +H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMK---------KSNGAYFPEEKL------- 110
I+ A + G IV Y G++ E ++ N ++ PEE+L
Sbjct: 88 IINLLGACTQDGPLYVIVE-YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 146
Query: 111 CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT 170
C + Q+ ++YL S +HRDL N+ +T+D +++ DFGLA+ + D
Sbjct: 147 CAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 171 ---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKINRSS 223
+M PE L D Y +SD+WS G ++E+ + P ++ L+ + +R
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 264
Query: 224 IGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
PS + L +++ P RP+ +L++
Sbjct: 265 K---PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 296
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 14 IGRGAFGAAIL---VNHRAEKKKYVLK---KIRLARQTERCRRSAHQEMALIARV-QHPY 66
+G GAFG +L + +K V K K+ + TE+ EM ++ + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMK---------KSNGAYFPEEKL------- 110
I+ A + G IV Y G++ E ++ N ++ PEE+L
Sbjct: 96 IINLLGACTQDGPLYVIVE-YASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 111 CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT 170
C + Q+ ++YL S +HRDL N+ +T+D +++ DFGLA+ + D
Sbjct: 155 CAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 171 ---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKINRSS 223
+M PE L D Y +SD+WS G ++E+ + P ++ L+ + +R
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 272
Query: 224 IGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
PS + L +++ P RP+ +L++
Sbjct: 273 K---PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 14 IGRGAFGAAIL---VNHRAEKKKYVLK---KIRLARQTERCRRSAHQEMALIARV-QHPY 66
+G GAFG +L + +K V K K+ + TE+ EM ++ + +H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKK---------SNGAYFPEEKL------- 110
I+ A + G IV Y G++ E ++ N ++ PEE+L
Sbjct: 81 IINLLGACTQDGPLYVIVE-YASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 139
Query: 111 CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT 170
C + Q+ ++YL S +HRDL N+ +T+D +++ DFGLA+ + D
Sbjct: 140 CAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 171 ---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKINRSS 223
+M PE L D Y +SD+WS G ++E+ + P ++ L+ + +R
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 257
Query: 224 IGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
PS + L +++ P RP+ +L++
Sbjct: 258 K---PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 14 IGRGAFGAAIL---VNHRAEKKKYVLK---KIRLARQTERCRRSAHQEMALIARV-QHPY 66
+G GAFG +L + +K V K K+ + TE+ EM ++ + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMK---------KSNGAYFPEEKL------- 110
I+ A + G IV Y G++ E ++ N ++ PEE+L
Sbjct: 96 IINLLGACTQDGPLYVIVE-YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 111 CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT 170
C + Q+ ++YL S +HRDL N+ +T+D +++ DFGLA+ + D
Sbjct: 155 CAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 171 ---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKINRSS 223
+M PE L D Y +SD+WS G ++E+ + P ++ L+ + +R
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 272
Query: 224 IGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
PS + L +++ P RP+ +L++
Sbjct: 273 K---PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 14 IGRGAFGAAIL---VNHRAEKKKYVLK---KIRLARQTERCRRSAHQEMALIARV-QHPY 66
+G GAFG +L + +K V K K+ + TE+ EM ++ + +H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMK---------KSNGAYFPEEKL------- 110
I+ A + G IV Y G++ E ++ N ++ PEE+L
Sbjct: 137 IINLLGACTQDGPLYVIVE-YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 111 CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT 170
C + Q+ ++YL S +HRDL N+ +T+D +++ DFGLA+ + D
Sbjct: 196 CAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 171 ---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKINRSS 223
+M PE L D Y +SD+WS G ++E+ + P ++ L+ + +R
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 313
Query: 224 IGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
PS + L +++ P RP+ +L++
Sbjct: 314 K---PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 15/259 (5%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRL--ARQTERCRRSAHQEMALIARVQHPY 66
+I + IG G FG + K+ + I+ A T++ RR E +++ + HP
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 76
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ E V K V I+T Y E G + ++K++G F +L + + YL
Sbjct: 77 IIHL-EGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGSGMKYLSD 134
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADI 182
+HRDL NI + + ++ DFG+++ L+ D + A + G + PE +A
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 194
Query: 183 PYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAG--LISKINRSSIGPLPSCYSPSLKTL 238
+ SD+WS G M+E+ ++ RP +DM+ +I I P P +L L
Sbjct: 195 KFTSASDVWSYGIVMWEVMSYGERP---YWDMSNQDVIKAIEEGYRLPPPMDCPIALHQL 251
Query: 239 IKGMLRKNPEHRPSASELL 257
+ +K RP +++
Sbjct: 252 MLDCWQKERSDRPKFGQIV 270
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 134/340 (39%), Gaps = 80/340 (23%)
Query: 1 MESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
+E+ +Y + + +G G+FG V K++ LKK+ + R ++E+ ++
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVL------QDPRYKNRELDIMK 55
Query: 61 RVQHPYIVEFKEAWVEKG-------------------------------------CYVCI 83
+ H I++ + + G Y+ +
Sbjct: 56 VLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNV 115
Query: 84 VTGYCEGGDMAELMKKS---NGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIF 140
+ Y D + KS +G P + + QL AV ++HS + HRD+K N+
Sbjct: 116 IMEYVP--DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLL 173
Query: 141 L-TKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPEL-LADIPYGFKSDIWSLGCCMY 198
+ +KD ++L DFG AK L + + + + + Y PEL L Y D+WS+GC
Sbjct: 174 VNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233
Query: 199 EMAAHRPAF----------KAFDMAGLISKINRSSIGP------------------LPSC 230
E+ +P F + + G +K + P LP
Sbjct: 234 ELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEG 293
Query: 231 YSPSLKT-LIKGMLRKNPEHRPSASELLKHPFLQHFVDQY 269
+PSL L++ +LR P+ R + E + HPF H + Y
Sbjct: 294 -TPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSY 332
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 14 IGRGAFGAAIL---VNHRAEKKKYVLK---KIRLARQTERCRRSAHQEMALIARV-QHPY 66
+G GAFG +L + +K V K K+ + TE+ EM ++ + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKK---------SNGAYFPEEKL------- 110
I+ A + G IV Y G++ E ++ N ++ PEE+L
Sbjct: 96 IINLLGACTQDGPLYVIVE-YASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 154
Query: 111 CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT 170
C + Q+ ++YL S +HRDL N+ +T+D +++ DFGLA+ + D
Sbjct: 155 CAY--QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 171 ---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKINRSS 223
+M PE L D Y +SD+WS G ++E+ + P ++ L+ + +R
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 272
Query: 224 IGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
PS + L +++ P RP+ +L++
Sbjct: 273 K---PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 97/206 (47%), Gaps = 4/206 (1%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
+E A++ ++HP +V+ + + I+T + G++ + +++ N L
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
Q+ A++YL +HRDL N + ++ V++ DFGL++ + D A + P
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE LA + KSD+W+ G ++E+A + + D++ + + + P
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASEL 256
+ L++ + NP RPS +E+
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 10/207 (4%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRL--ARQTERCRRSAHQEMALIARVQHPY 66
+I + IG G FG + K+ + I+ A T++ RR E +++ + HP
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ E V K V I+T Y E G + ++K++G F +L + + YL
Sbjct: 71 IIHL-EGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLRGIGSGMKYLSD 128
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADI 182
+HRDL NI + + ++ DFG+++ L+ D + A + G + PE +A
Sbjct: 129 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 188
Query: 183 PYGFKSDIWSLGCCMYEMAAH--RPAF 207
+ SD+WS G M+E+ ++ RP +
Sbjct: 189 KFTSASDVWSYGIVMWEVMSYGERPYW 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 6 DQYEIMEQIGRGAFGAAILVN----HRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
D+ + + +G GAFG ++ + + K+ V +++ + TE+ EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYF-------PEEK 109
+ +H I+ A + G IV Y G++ E ++ G + PEE+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVE-YASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 L-------CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD 162
+ C + QL ++YL S +HRDL N+ +T++ +R+ DFGLA+ + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 163 LASSVVGT---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGL 215
+M PE L D Y +SD+WS G M+E+ + P ++ L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ + +R P+ + L +++ P RP+ +L++
Sbjct: 272 LKEGHRMDK---PANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 97/206 (47%), Gaps = 4/206 (1%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
+E A++ ++HP +V+ + + I+T + G++ + +++ N L
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
Q+ A++YL +HRDL N + ++ V++ DFGL++ + D A + P
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE LA + KSD+W+ G ++E+A + + D++ + + + P
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 236
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASEL 256
+ L++ + NP RPS +E+
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 115/255 (45%), Gaps = 17/255 (6%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPY 66
+I E IG G FG +A KK I+ + TER RR E +++ + +HP
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 67 IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHS 126
I+ E V V I+T + E G + ++ ++G F +L + + YL
Sbjct: 77 IIRL-EGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIASGMRYLAE 134
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK---ADDLASSVVGTP---NYMCPELLA 180
+HRDL NI + + ++ DFGL++ L+ +D +S +G + PE +A
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 181 DIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAG--LISKINRSSIGPLPSCYSPSLK 236
+ SD WS G M+E+ + RP +DM+ +I+ I + P P SL
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERP---YWDMSNQDVINAIEQDYRLPPPPDCPTSLH 251
Query: 237 TLIKGMLRKNPEHRP 251
L+ +K+ RP
Sbjct: 252 QLMLDCWQKDRNARP 266
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 97/206 (47%), Gaps = 4/206 (1%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
+E A++ ++HP +V+ + + I+T + G++ + +++ N L
Sbjct: 71 KEAAVMKEIKHPNLVQLLGVCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYM 129
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
Q+ A++YL +HRDL N + ++ V++ DFGL++ + D A + P
Sbjct: 130 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 189
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE LA + KSD+W+ G ++E+A + + D++ + + + P
Sbjct: 190 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 249
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASEL 256
+ L++ + NP RPS +E+
Sbjct: 250 CPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 15 GRGAFGAAI--LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKE 72
G G FG VN+ K + + + TE ++ QE+ + A+ QH +VE
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMVDIT--TEELKQQFDQEIKVXAKCQHENLVELL- 87
Query: 73 AWVEKGCYVCIVTGYCEGGDMAELMKKSNGAY-FPEEKLCKWFAQLLLAVDYLHSNYVLH 131
+ G +C+V Y G + + + +G CK +++LH N+ +H
Sbjct: 88 GFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIH 147
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKT---LKADDLASSVVGTPNYMCPELLAD--IPYGF 186
RD+K +NI L + ++ DFGLA+ S +VGT Y PE L P
Sbjct: 148 RDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEITP--- 204
Query: 187 KSDIWSLGCCMYEMAAHRPA 206
KSDI+S G + E+ PA
Sbjct: 205 KSDIYSFGVVLLEIITGLPA 224
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 97/206 (47%), Gaps = 4/206 (1%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
+E A++ ++HP +V+ + + I+T + G++ + +++ N L
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 114 FAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP- 171
Q+ A++YL +HRDL N + ++ V++ DFGL++ + D A + P
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 178
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSC 230
+ PE LA + KSD+W+ G ++E+A + + D++ + + + P
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 238
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASEL 256
+ L++ + NP RPS +E+
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 33/276 (11%)
Query: 13 QIGRGAFGAAILV---NHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
++G GAFG L N E+ K ++ L +E R+ +E L+ +QH +IV
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW----------FAQLLL 119
F E G + +V Y GD+ ++ S+G P+ KL QLL
Sbjct: 79 FFGVCTE-GRPLLMVFEYMRHGDLNRFLR-SHG---PDAKLLAGGEDVAPGPLGLGQLLA 133
Query: 120 AVD-------YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVG 169
YL + +HRDL N + + V++GDFG+++ + + D + +
Sbjct: 134 VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 170 TPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPL 227
+M PE + + +SD+WS G ++E+ + +P ++ + I I +
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA-IDCITQGRELER 252
Query: 228 PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
P P + +++G ++ P+ R S ++ H LQ
Sbjct: 253 PRACPPEVYAIMRGCWQREPQQRHSIKDV--HARLQ 286
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 70.9 bits (172), Expect = 4e-12, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 33/276 (11%)
Query: 13 QIGRGAFGAAILV---NHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
++G GAFG L N E+ K ++ L +E R+ +E L+ +QH +IV
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW----------FAQLLL 119
F E G + +V Y GD+ ++ S+G P+ KL QLL
Sbjct: 85 FFGVCTE-GRPLLMVFEYMRHGDLNRFLR-SHG---PDAKLLAGGEDVAPGPLGLGQLLA 139
Query: 120 AVD-------YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVG 169
YL + +HRDL N + + V++GDFG+++ + + D + +
Sbjct: 140 VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 170 TPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPL 227
+M PE + + +SD+WS G ++E+ + +P ++ + I I +
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA-IDCITQGRELER 258
Query: 228 PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
P P + +++G ++ P+ R S ++ H LQ
Sbjct: 259 PRACPPEVYAIMRGCWQREPQQRHSIKDV--HARLQ 292
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 6 DQYEIMEQIGRGAFGAAILVN----HRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
D+ + + +G GAFG ++ + + K+ V +++ + TE+ EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKS-----NGAY----FPEEK 109
+ +H I+ A + G IV Y G++ E ++ +Y PEE+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVE-YASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 110 L-------CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD 162
+ C + QL ++YL S +HRDL N+ +T++ +++ DFGLA+ + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 163 LASSVVGT---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGL 215
+M PE L D Y +SD+WS G M+E+ + P ++ L
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ + +R P+ + L +++ P RP+ +L++
Sbjct: 272 LKEGHRMDK---PANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 70.5 bits (171), Expect = 5e-12, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 33/276 (11%)
Query: 13 QIGRGAFGAAILV---NHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
++G GAFG L N E+ K ++ L +E R+ +E L+ +QH +IV
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW----------FAQLLL 119
F E G + +V Y GD+ ++ S+G P+ KL QLL
Sbjct: 108 FFGVCTE-GRPLLMVFEYMRHGDLNRFLR-SHG---PDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 120 AVD-------YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVG 169
YL + +HRDL N + + V++GDFG+++ + + D + +
Sbjct: 163 VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 170 TPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPL 227
+M PE + + +SD+WS G ++E+ + +P ++ + I I +
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA-IDCITQGRELER 281
Query: 228 PSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
P P + +++G ++ P+ R S ++ H LQ
Sbjct: 282 PRACPPEVYAIMRGCWQREPQQRHSIKDV--HARLQ 315
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 11/252 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPYIVEFK 71
+G G FG + KK + I+ + TE+ RR E +++ + HP I+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
E V K V IVT E G + ++K + A F +L + + YL +H
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGAVH 170
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADIPYGFK 187
RDL NI + + ++ DFGL++ L+ D + A + G + PE +A +
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 188 SDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
SD+WS G ++E+ ++ RP ++ + +I ++ P P +L L+ +K
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 246 NPEHRPSASELL 257
+ +RP +++
Sbjct: 290 DRNNRPKFEQIV 301
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 6 DQYEIMEQIGRGAFGAAILVN----HRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
D+ + + +G GAFG ++ + + K+ V +++ + TE+ EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYF-------PEEK 109
+ +H I+ A + G IV Y G++ E ++ G + PEE+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVE-YASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 L-------CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD 162
+ C + QL ++YL S +HRDL N+ +T++ +++ DFGLA+ + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 163 LASSVVGT---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGL 215
+M PE L D Y +SD+WS G M+E+ + P ++ L
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ + +R P+ + L +++ P RP+ +L++
Sbjct: 272 LKEGHRMDK---PANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 36/283 (12%)
Query: 6 DQYEIMEQIGRGAFGAAILVN----HRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
D+ + + +G GAFG ++ + + K+ V +++ + TE+ EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYF-------PEEK 109
+ +H I+ A + G IV Y G++ E ++ G + PEE+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVE-YASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 L-------CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD 162
+ C + QL ++YL S +HRDL N+ +T++ +++ DFGLA+ + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 163 LASSVVGT---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGL 215
+ +M PE L D Y +SD+WS G M+E+ + P ++ L
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ + +R P+ + L +++ P RP+ +L++
Sbjct: 272 LKEGHRMDK---PANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 45/274 (16%)
Query: 5 MDQYEIMEQI-GRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARV- 62
+D Y++ Q+ G G G + + ++ ++K+ LK + + C + A +E+ L R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML------QDCPK-ARREVELHWRAS 68
Query: 63 QHPYIVE----FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
Q P+IV ++ + + C + IV +GG++ ++ F E + + +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTK---DQDVRLGDFGLAKTLKADDLASSVVGTPNYMC 175
A+ YLHS + HRD+K N+ T + ++L DFG AK +
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEK------------- 174
Query: 176 PELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKA-FDMA---GLISKINRSSI---GPLP 228
Y D+WSLG MY + P F + +A G+ ++I P
Sbjct: 175 --------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 226
Query: 229 SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFL 262
S S +K LI+ +L+ P R + +E + HP++
Sbjct: 227 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 6 DQYEIMEQIGRGAFGAAILVN----HRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
D+ + + +G GAFG ++ + + K+ V +++ + TE+ EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYF-------PEEK 109
+ +H I+ A + G IV Y G++ E ++ G + PEE+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIV-AYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 L-------CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD 162
+ C + QL ++YL S +HRDL N+ +T++ +++ DFGLA+ + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 163 LASSVVGT---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGL 215
+M PE L D Y +SD+WS G M+E+ + P ++ L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ + +R P+ + L +++ P RP+ +L++
Sbjct: 272 LKEGHRMD---KPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 6 DQYEIMEQIGRGAFGAAILVN----HRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
D+ + + +G G FG ++ + + K+ V +++ + TE+ EM ++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYF-------PEEK 109
+ +H I+ A + G IV Y G++ E ++ G + PEE+
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVE-YASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 110 L-------CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD 162
+ C + QL ++YL S +HRDL N+ +T++ +++ DFGLA+ + D
Sbjct: 200 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 163 LASSVVGT---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGL 215
+M PE L D Y +SD+WS G M+E+ + P ++ L
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 317
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ + +R P+ + L +++ P RP+ +L++
Sbjct: 318 LKEGHRMD---KPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 29/212 (13%)
Query: 14 IGRGAFGAAI-LVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIARV-QHPYIV 68
+G GAFG + K+ VLK +++ + T + + E+ +++ + QH IV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKS---------NGAYFPEEKL-----CKWF 114
A G V ++T YC GD+ +++ N ++ PEE+L +
Sbjct: 114 NLLGACTHGGP-VLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFS 172
Query: 115 AQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-- 172
+Q+ + +L S +HRD+ N+ LT ++GDFGLA+ + D S+ + N
Sbjct: 173 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND---SNYIVKGNAR 229
Query: 173 ----YMCPELLADIPYGFKSDIWSLGCCMYEM 200
+M PE + D Y +SD+WS G ++E+
Sbjct: 230 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 11/252 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPYIVEFK 71
+G G FG + KK + I+ + TE+ RR E +++ + HP I+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
E V K V IVT E G + ++K + A F +L + + YL +H
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADIPYGFK 187
RDL NI + + ++ DFGL++ L+ D + A + G + PE +A +
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 188 SDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
SD+WS G ++E+ ++ RP ++ + +I ++ P P +L L+ +K
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 246 NPEHRPSASELL 257
+ +RP +++
Sbjct: 290 DRNNRPKFEQIV 301
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 6 DQYEIMEQIGRGAFGAAILVN----HRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
D+ + + +G GAFG ++ + + K+ V +++ + TE+ EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYF-------PEEK 109
+ +H I+ A + G IV Y G++ E ++ G + PEE+
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVE-YASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 L-------CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD 162
+ C + QL ++YL S +HRDL N+ +T++ +++ DFGLA+ + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 163 LASSVVGT---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGL 215
+M PE L D Y +SD+WS G M+E+ + P ++ L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ + +R P+ + L +++ P RP+ +L++
Sbjct: 272 LKEGHRMDK---PANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 14/202 (6%)
Query: 14 IGRGAFGAAILVNHRAEKK---KYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
+G G FG+ + N + E K +K ++L ++R E A + HP ++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 71 KEAWVEKGCYVC----IVTGYCEGGDMAELMKKS----NGAYFPEEKLCKWFAQLLLAVD 122
+E ++ + + GD+ + S + P + L K+ + L ++
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLA--SSVVGTP-NYMCPELL 179
YL + LHRDL N L D V + DFGL+K + + D + P ++ E L
Sbjct: 162 YLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL 221
Query: 180 ADIPYGFKSDIWSLGCCMYEMA 201
AD Y KSD+W+ G M+E+A
Sbjct: 222 ADRVYTSKSDVWAFGVTMWEIA 243
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 47/253 (18%)
Query: 49 RRSAHQEMALIARVQHPYIVEFKEAWVEKG-CYVCIVTGYCEGGDMAELMKKSNGAYFPE 107
R +E+ ++ + H +IV++K ++G V +V Y G + + Y P
Sbjct: 54 RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRD--------YLPR 105
Query: 108 EKLCKWFAQLLL-------AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA 160
C AQLLL + YLH+ + +HR L N+ L D+ V++GDFGLAK +
Sbjct: 106 H--CVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 163
Query: 161 --------DDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-----RPAF 207
+D S V + PE L + + + SD+WS G +YE+ + P
Sbjct: 164 GHEYYRVREDGDSPVF----WYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHT 219
Query: 208 KAFDMAG----------LISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELL 257
K ++ G L + R P P + L+K RP+ L+
Sbjct: 220 KFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLV 279
Query: 258 KHPFLQHFVDQYR 270
P LQ ++Y+
Sbjct: 280 --PILQTAQEKYQ 290
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 6 DQYEIMEQIGRGAFGAAILVN----HRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
D+ + + +G GAFG ++ + + K+ V +++ + TE+ EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYF-------PEEK 109
+ +H I+ A + G IV Y G++ E ++ G + PEE+
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVE-YASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 L-------CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD 162
+ C + QL ++YL S +HRDL N+ +T++ +++ DFGLA+ + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 163 LASSVVGT---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGL 215
+M PE L D Y +SD+WS G M+E+ + P ++ L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ + +R P+ + L +++ P RP+ +L++
Sbjct: 272 LKEGHRMD---KPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 47/253 (18%)
Query: 49 RRSAHQEMALIARVQHPYIVEFKEAWVEKG-CYVCIVTGYCEGGDMAELMKKSNGAYFPE 107
R +E+ ++ + H +IV++K ++G V +V Y G + + Y P
Sbjct: 55 RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRD--------YLPR 106
Query: 108 EKLCKWFAQLLL-------AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA 160
C AQLLL + YLH+ + +HR L N+ L D+ V++GDFGLAK +
Sbjct: 107 H--CVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 164
Query: 161 --------DDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAH-----RPAF 207
+D S V + PE L + + + SD+WS G +YE+ + P
Sbjct: 165 GHEYYRVREDGDSPVF----WYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHT 220
Query: 208 KAFDMAG----------LISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELL 257
K ++ G L + R P P + L+K RP+ L+
Sbjct: 221 KFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLV 280
Query: 258 KHPFLQHFVDQYR 270
P LQ ++Y+
Sbjct: 281 --PILQTAQEKYQ 291
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCY-VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK 112
+E+ ++ + H IV++K E G + ++ + G + E + K+ +++L K
Sbjct: 72 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL-K 130
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN 172
+ Q+ +DYL S +HRDL N+ + + V++GDFGL K ++ D +V +
Sbjct: 131 YAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRD 190
Query: 173 ----YMCPELLADIPYGFKSDIWSLGCCMYEMAAH 203
+ PE L + SD+WS G ++E+ +
Sbjct: 191 SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTY 225
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 11/252 (4%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPYIVEFK 71
+G G FG + KK + I+ + TE+ RR E +++ + HP I+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 82
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
E V K V IVT E G + ++K + A F +L + + YL +H
Sbjct: 83 EGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVH 141
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADIPYGFK 187
RDL NI + + ++ DFGL++ L+ D + A + G + PE +A +
Sbjct: 142 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 201
Query: 188 SDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRK 245
SD+WS G ++E+ ++ RP ++ + +I ++ P P +L L+ +K
Sbjct: 202 SDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQK 260
Query: 246 NPEHRPSASELL 257
+ +RP +++
Sbjct: 261 DRNNRPKFEQIV 272
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 112/261 (42%), Gaps = 15/261 (5%)
Query: 12 EQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
+++G G FG + + K+ ++ + + E ++ +QH +V+
Sbjct: 194 KKLGAGQFGEVWMATY----NKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 249
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
++ Y I+T + G + + +K G+ P KL + AQ+ + ++ +H
Sbjct: 250 AVVTKEPIY--IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 307
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADIPYGFKSD 189
RDL+ +NI ++ ++ DFGLA+ ++ ++ A P + PE + + KSD
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 367
Query: 190 IWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPE 248
+WS G + E+ + R + +I + R P P L ++ + PE
Sbjct: 368 VWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPE 427
Query: 249 HRPSASELLKHPFLQHFVDQY 269
RP+ ++Q +D +
Sbjct: 428 ERPT------FEYIQSVLDDF 442
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 6 DQYEIMEQIGRGAFGAAILVN----HRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
D+ + + +G GAFG ++ + + K+ V +++ + TE EM ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYF-------PEEK 109
+ +H I+ A + G IV Y G++ E ++ G + PEE+
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVE-YASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 110 L-------CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD 162
+ C + QL ++YL S +HRDL N+ +T++ +++ DFGLA+ + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 163 LASSVVGT---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGL 215
+M PE L D Y +SD+WS G M+E+ + P ++ L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ + +R P+ + L +++ P RP+ +L++
Sbjct: 272 LKEGHRMDK---PANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 113/255 (44%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 227 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL- 281
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+T + G++ + +++ N L Q+ A++YL
Sbjct: 282 -------LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 334
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HR+L N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 335 EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 394
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D++ + + + P + L++
Sbjct: 395 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 454
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 455 CWQWNPSDRPSFAEI 469
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 112/261 (42%), Gaps = 15/261 (5%)
Query: 12 EQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
+++G G FG + + K+ ++ + + E ++ +QH +V+
Sbjct: 21 KKLGAGQFGEVWMATY----NKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 76
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
++ Y I+T + G + + +K G+ P KL + AQ+ + ++ +H
Sbjct: 77 AVVTKEPIY--IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 134
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADIPYGFKSD 189
RDL+ +NI ++ ++ DFGLA+ ++ ++ A P + PE + + KSD
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 194
Query: 190 IWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPE 248
+WS G + E+ + R + +I + R P P L ++ + PE
Sbjct: 195 VWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPE 254
Query: 249 HRPSASELLKHPFLQHFVDQY 269
RP+ ++Q +D +
Sbjct: 255 ERPT------FEYIQSVLDDF 269
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 25 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+T + G++ + +++ N L Q+ A++YL
Sbjct: 81 G--------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HRDL N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D++ + + + P + L++
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 252
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 253 CWQWNPSDRPSFAEI 267
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 67/278 (24%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHR--AEKKKYVLKKIRLARQTERCRRSAHQEMALI 59
E R +Y + Q+G+G FG+ L + + ++ +L +R +E+ ++
Sbjct: 21 EERHLKY--ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL 78
Query: 60 ARVQHPYIVEFKEAWVEKG-CYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
+ +IV+++ G + +V Y G + + +++ A +L + +Q+
Sbjct: 79 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQIC 137
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----Y 173
++YL S +HRDL NI + + V++ DFGLAK L D VV P +
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREPGQSPIFW 196
Query: 174 MCPELLADIPYGFKSDIWSLGCCMYEMAAH-----RPAFKAFDMAGL---ISKINRSSIG 225
PE L+D + +SD+WS G +YE+ + P+ + M G + ++R
Sbjct: 197 YAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256
Query: 226 -------PLPSCYSPSLKTLIKGMLRKNPEHRPSASEL 256
P P + L+K +P+ RPS S L
Sbjct: 257 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 54 QEMALIARVQHPYIVEFKEAWVEKGCY-VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK 112
+E+ ++ + H IV++K E G + ++ + G + E + K+ +++L K
Sbjct: 60 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL-K 118
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN 172
+ Q+ +DYL S +HRDL N+ + + V++GDFGL K ++ D +V +
Sbjct: 119 YAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRD 178
Query: 173 ----YMCPELLADIPYGFKSDIWSLGCCMYEMAAH 203
+ PE L + SD+WS G ++E+ +
Sbjct: 179 SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTY 213
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 25 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+T + G++ + +++ N L Q+ A++YL
Sbjct: 81 G--------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HRDL N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D++ + + + P + L++
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 252
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 253 CWQWNPSDRPSFAEI 267
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 105/249 (42%), Gaps = 39/249 (15%)
Query: 49 RRSAHQEMALIARVQHPYIVEFKEAWVEKG-CYVCIVTGYCEGGDMAELMKKSNGAYFPE 107
R QE+ ++ + H +I+++K ++G + +V Y G + + Y P
Sbjct: 60 RSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRD--------YLPR 111
Query: 108 EKLCKWFAQLLL-------AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA 160
+ AQLLL + YLHS + +HR+L N+ L D+ V++GDFGLAK +
Sbjct: 112 HSIG--LAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
Query: 161 DDLASSVVGTPN----YMCPELLADIPYGFKSDIWSLGCCMYEMAAH-----RPAFKAFD 211
V + + PE L + + + SD+WS G +YE+ H P K +
Sbjct: 170 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE 229
Query: 212 MAG----------LISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPF 261
+ G L + R P P + L+K RP+ L+ P
Sbjct: 230 LIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLI--PI 287
Query: 262 LQHFVDQYR 270
L+ ++YR
Sbjct: 288 LKTVHEKYR 296
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 113/255 (44%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 266 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL- 320
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+T + G++ + +++ N L Q+ A++YL
Sbjct: 321 -------LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 373
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HR+L N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 374 EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 433
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D++ + + + P + L++
Sbjct: 434 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 493
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 494 CWQWNPSDRPSFAEI 508
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 14 IGRGAFGAAI-LVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIARV-QHPYIV 68
+G GAFG + K+ VLK +++ + T + + E+ +++ + QH IV
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK--------LCKWFAQLLLA 120
A G V ++T YC GD+ +++ A +E L + +Q+
Sbjct: 106 NLLGA-CTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 164
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN------YM 174
+ +L S +HRD+ N+ LT ++GDFGLA+ + D S+ + N +M
Sbjct: 165 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND---SNYIVKGNARLPVKWM 221
Query: 175 CPELLADIPYGFKSDIWSLGCCMYEM 200
PE + D Y +SD+WS G ++E+
Sbjct: 222 APESIFDCVYTVQSDVWSYGILLWEI 247
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 20 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+T + G++ + +++ N L Q+ A++YL
Sbjct: 76 G--------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HRDL N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D++ + + + P + L++
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 247
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 248 CWQWNPSDRPSFAEI 262
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 113/255 (44%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 224 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL- 278
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+T + G++ + +++ N L Q+ A++YL
Sbjct: 279 -------LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 331
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HR+L N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 332 EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 391
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D++ + + + P + L++
Sbjct: 392 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 451
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 452 CWQWNPSDRPSFAEI 466
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 20 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+T + G++ + +++ N L Q+ A++YL
Sbjct: 76 G--------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HRDL N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D++ + + + P + L++
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 247
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 248 CWQWNPSDRPSFAEI 262
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 110/254 (43%), Gaps = 15/254 (5%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLAR--QTERCRRSAHQEMALIARVQHPYIVEFK 71
IG G FG + K+ V I+ + TE+ RR E +++ + HP +V
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL- 109
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
E V +G V IV + E G + ++K +G F +L + + YL +H
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-FTVIQLVGMLRGIAAGMRYLADMGYVH 168
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKAD-DLASSVVGTP---NYMCPELLADIPYGFK 187
RDL NI + + ++ DFGL++ ++ D + + G + PE + +
Sbjct: 169 RDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSA 228
Query: 188 SDIWSLGCCMYEMAAH--RPAFKAFDMAG--LISKINRSSIGPLPSCYSPSLKTLIKGML 243
SD+WS G M+E+ ++ RP +DM+ +I I P P L L+
Sbjct: 229 SDVWSYGIVMWEVMSYGERP---YWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCW 285
Query: 244 RKNPEHRPSASELL 257
+K RP +++
Sbjct: 286 QKERAERPKFEQIV 299
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 14 IGRGAFGAAI-LVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIARV-QHPYIV 68
+G GAFG + K+ VLK +++ + T + + E+ +++ + QH IV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK--------LCKWFAQLLLA 120
A G V ++T YC GD+ +++ A +E L + +Q+
Sbjct: 114 NLLGACTHGGP-VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 172
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN------YM 174
+ +L S +HRD+ N+ LT ++GDFGLA+ + D S+ + N +M
Sbjct: 173 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND---SNYIVKGNARLPVKWM 229
Query: 175 CPELLADIPYGFKSDIWSLGCCMYEM 200
PE + D Y +SD+WS G ++E+
Sbjct: 230 APESIFDCVYTVQSDVWSYGILLWEI 255
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 25 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+T + G++ + +++ N L Q+ A++YL
Sbjct: 81 G--------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HRDL N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 192
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D++ + + + P + L++
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 252
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 253 CWQWNPSDRPSFAEI 267
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 77/304 (25%), Positives = 130/304 (42%), Gaps = 53/304 (17%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIR--LARQTERCRRSAHQEMALIARV 62
++ Y I+ + +G F IL + K Y LKK L + +S + ++++ ++
Sbjct: 30 INDYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKY 87
Query: 63 -----QHPYIVEFKEAWVEKGCYVC--IVTGYCEGGDMAELMK---------------KS 100
+ I + K + C C I+T Y E + E M+ K+
Sbjct: 88 DDFKNELQIITDIKNEY----CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN 143
Query: 101 NGAYFPEEKLCKWFAQLLLAVDYLHSNY-VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK 159
+ P + + +L + Y+H+ + HRD+K SNI + K+ V+L DFG ++ +
Sbjct: 144 YTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV 203
Query: 160 ADDLASSVVGTPNYMCPELLADIPY--GFKSDIWSLGCCMYEMAAHRPAFK-AFDMAGLI 216
+ S GT +M PE ++ G K DIWSLG C+Y M + F + L
Sbjct: 204 DKKIKGS-RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262
Query: 217 SKINRSSIG-PL-------------PSCYSPSLKT----LIKGMLRKNPEHRPSASELLK 258
+ I +I PL +C + L +K LRKNP R ++ + LK
Sbjct: 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322
Query: 259 HPFL 262
H +L
Sbjct: 323 HEWL 326
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 6 DQYEIMEQIGRGAFGAAILVN----HRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
D+ + + +G G FG ++ + + K+ V +++ + TE+ EM ++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYF-------PEEK 109
+ +H I+ A + G IV Y G++ E ++ G + PEE+
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVE-YASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 110 L-------CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD 162
+ C + QL ++YL S +HRDL N+ +T++ +++ DFGLA+ + D
Sbjct: 146 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 163 LASSVVGT---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGL 215
+M PE L D Y +SD+WS G M+E+ + P ++ L
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 263
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ + +R P+ + L +++ P RP+ +L++
Sbjct: 264 LKEGHRMDK---PANCTNELYMMMRDCWHAVPSQRPTFKQLVE 303
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 22 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+T + G++ + +++ N L Q+ A++YL
Sbjct: 78 G--------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HRDL N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 189
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D++ + + + P + L++
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 249
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 250 CWQWNPSDRPSFAEI 264
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 7 QYEIMEQIGRGAFGAAI-LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
+YE+++ IG+G+FG + +H+ + +++ R +R R A +E+ ++ ++
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHV----ALKMVRNEKRFHRQAAEEIRILEHLRKQ 153
Query: 66 ------YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
++ E + + ++C+ T ++ EL+KK+ F + K+ +L
Sbjct: 154 DKDNTMNVIHMLENFTFRN-HICM-TFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKD--QDVRLGDFGLAKTLKADDLASSVVGTPNYMCPE 177
+D LH N ++H DLK NI L + +++ DFG + + + + Y PE
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQSRFYRAPE 269
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRP 205
++ YG D+WSLGC + E+ P
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 6 DQYEIMEQIGRGAFGAAILVN----HRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
D+ + + +G G FG ++ + + K+ V +++ + TE+ EM ++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYF-------PEEK 109
+ +H I+ A + G IV Y G++ E ++ G + PEE+
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVE-YASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 110 L-------CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD 162
+ C + QL ++YL S +HRDL N+ +T++ +++ DFGLA+ + D
Sbjct: 141 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 163 LASSVVGT---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGL 215
+M PE L D Y +SD+WS G M+E+ + P ++ L
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 258
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ + +R P+ + L +++ P RP+ +L++
Sbjct: 259 LKEGHRMD---KPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 298
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 6 DQYEIMEQIGRGAFGAAILVN----HRAEKKKYVLKKIRLARQ--TERCRRSAHQEMALI 59
D+ + + +G G FG ++ + + K+ V +++ + TE+ EM ++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 60 ARV-QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN--GAYF-------PEEK 109
+ +H I+ A + G IV Y G++ E ++ G + PEE+
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVE-YASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 110 L-------CKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD 162
+ C + QL ++YL S +HRDL N+ +T++ +++ DFGLA+ + D
Sbjct: 143 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 163 LASSVVGT---PNYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGL 215
+M PE L D Y +SD+WS G M+E+ + P ++ L
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 260
Query: 216 ISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ + +R P+ + L +++ P RP+ +L++
Sbjct: 261 LKEGHRMDK---PANCTNELYMMMRDCWHAVPSQRPTFKQLVE 300
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 27/278 (9%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHR--AEKKKYVLKKIRLARQTERCRRSAHQEMALI 59
E R +Y + Q+G+G FG+ L + + ++ +L +R +E+ ++
Sbjct: 5 EERHLKY--ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL 62
Query: 60 ARVQHPYIVEFKEAWVEKG-CYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
+ +IV+++ G + +V Y G + + +++ A +L + +Q+
Sbjct: 63 KALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQIC 121
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----Y 173
++YL S +HRDL NI + + V++ DFGLAK L D VV P +
Sbjct: 122 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DXXVVREPGQSPIFW 180
Query: 174 MCPELLADIPYGFKSDIWSLGCCMYEMAAH-----RPAFKAFDMAG-------LISKINR 221
PE L+D + +SD+WS G +YE+ + P+ + M G L +
Sbjct: 181 YAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLEL 240
Query: 222 SSIG---PLPSCYSPSLKTLIKGMLRKNPEHRPSASEL 256
G P P + L+K +P+ RPS S L
Sbjct: 241 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 278
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 24 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+T + G++ + +++ N L Q+ A++YL
Sbjct: 80 G--------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HRDL N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 132 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 191
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D++ + + + P + L++
Sbjct: 192 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 251
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 252 CWQWNPSDRPSFAEI 266
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 25 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+T + G++ + +++ N L Q+ A++YL
Sbjct: 81 G--------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HRDL N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYN 192
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D++ + + + P + L++
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 252
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 253 CWQWNPSDRPSFAEI 267
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 21 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+T + G++ + +++ N L Q+ A++YL
Sbjct: 77 G--------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HRDL N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 129 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYN 188
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D++ + + + P + L++
Sbjct: 189 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 248
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 249 CWQWNPSDRPSFAEI 263
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 8/192 (4%)
Query: 12 EQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
EQIGRG FG RA+ +K R + + QE ++ + HP IV
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD-LKAKFLQEARILKQYSHPNIVRLI 178
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
+K + IV +GGD ++ + GA + L + ++YL S +H
Sbjct: 179 GVCTQKQP-IYIVMELVQGGDFLTFLR-TEGARLRVKTLLQMVGDAAAGMEYLESKCCIH 236
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT----PNYMCPELLADIPYGFK 187
RDL N +T+ +++ DFG+++ +AD + ++ G + PE L Y +
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSRE-EADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 188 SDIWSLGCCMYE 199
SD+WS G ++E
Sbjct: 296 SDVWSFGILLWE 307
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 21/230 (9%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR 61
E MD+YEI IG+G+FG + R E++ +K I+ + A E+ L+
Sbjct: 31 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK---NKKAFLNQAQIEVRLLEL 87
Query: 62 V------QHPYIVEFKEAWVEKG--CYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
+ YIV K ++ + C V + Y ++ +L++ +N K+
Sbjct: 88 MNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY----NLYDLLRNTNFRGVSLNLTRKF 143
Query: 114 FAQLLLAVDYLHS--NYVLHRDLKCSNIFLT--KDQDVRLGDFGLAKTLKADDLASSVVG 169
Q+ A+ +L + ++H DLK NI L K +++ DFG + + +
Sbjct: 144 AQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQXIQ 201
Query: 170 TPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI 219
+ Y PE+L +PY D+WSLGC + EM P F + ++KI
Sbjct: 202 SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 251
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 113/255 (44%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 22 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+T + G++ + +++ N L Q+ A++YL
Sbjct: 78 G--------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HRDL N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYN 189
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D++ + + + P + L++
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 249
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 250 CWQWNPSDRPSFAEI 264
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 67/278 (24%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHR--AEKKKYVLKKIRLARQTERCRRSAHQEMALI 59
E R +Y + Q+G+G FG+ L + + ++ +L +R +E+ ++
Sbjct: 8 EERHLKY--ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL 65
Query: 60 ARVQHPYIVEFKEAWVEKG-CYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
+ +IV+++ G + +V Y G + + +++ A +L + +Q+
Sbjct: 66 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQIC 124
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----Y 173
++YL S +HRDL NI + + V++ DFGLAK L D VV P +
Sbjct: 125 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREPGQSPIFW 183
Query: 174 MCPELLADIPYGFKSDIWSLGCCMYEMAAH-----RPAFKAFDMAGL---ISKINRSSIG 225
PE L+D + +SD+WS G +YE+ + P+ + M G + ++R
Sbjct: 184 YAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLEL 243
Query: 226 -------PLPSCYSPSLKTLIKGMLRKNPEHRPSASEL 256
P P + L+K +P+ RPS S L
Sbjct: 244 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 281
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 105/249 (42%), Gaps = 39/249 (15%)
Query: 49 RRSAHQEMALIARVQHPYIVEFKEAWVEKG-CYVCIVTGYCEGGDMAELMKKSNGAYFPE 107
R QE+ ++ + H +I+++K ++G + +V Y G + + Y P
Sbjct: 60 RSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRD--------YLPR 111
Query: 108 EKLCKWFAQLLL-------AVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA 160
+ AQLLL + YLH+ + +HR+L N+ L D+ V++GDFGLAK +
Sbjct: 112 HSIG--LAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
Query: 161 DDLASSVVGTPN----YMCPELLADIPYGFKSDIWSLGCCMYEMAAH-----RPAFKAFD 211
V + + PE L + + + SD+WS G +YE+ H P K +
Sbjct: 170 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE 229
Query: 212 MAG----------LISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPF 261
+ G L + R P P + L+K RP+ L+ P
Sbjct: 230 LIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLI--PI 287
Query: 262 LQHFVDQYR 270
L+ ++YR
Sbjct: 288 LKTVHEKYR 296
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 8/192 (4%)
Query: 12 EQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
EQIGRG FG RA+ +K R + + QE ++ + HP IV
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD-LKAKFLQEARILKQYSHPNIVRLI 178
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
+K + IV +GGD ++ + GA + L + ++YL S +H
Sbjct: 179 GVCTQKQP-IYIVMELVQGGDFLTFLR-TEGARLRVKTLLQMVGDAAAGMEYLESKCCIH 236
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGT----PNYMCPELLADIPYGFK 187
RDL N +T+ +++ DFG+++ +AD + ++ G + PE L Y +
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSRE-EADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 188 SDIWSLGCCMYE 199
SD+WS G ++E
Sbjct: 296 SDVWSFGILLWE 307
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 7 QYEIMEQIGRGAFGAAI-LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
+YE+++ IG+G+FG + +H+ + +++ R +R R A +E+ ++ ++
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHV----ALKMVRNEKRFHRQAAEEIRILEHLRKQ 153
Query: 66 ------YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
++ E + + ++C+ T ++ EL+KK+ F + K+ +L
Sbjct: 154 DKDNTMNVIHMLENFTFRN-HICM-TFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKD--QDVRLGDFGLAKTLKADDLASSVVGTPNYMCPE 177
+D LH N ++H DLK NI L + +++ DFG + + + + Y PE
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQSRFYRAPE 269
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRP 205
++ YG D+WSLGC + E+ P
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 13/211 (6%)
Query: 11 MEQIGRGAFGA---AILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
++ +G G FG + + K V K+ + + ++ M I + H +I
Sbjct: 36 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 95
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSN 127
V + G + +VT Y G + + +++ GA P+ L W Q+ + YL +
Sbjct: 96 VRLLG--LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQ-LLLNWGVQIAKGMYYLEEH 152
Query: 128 YVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD--LASSVVGTP-NYMCPELLADIPY 184
++HR+L N+ L V++ DFG+A L DD L S TP +M E + Y
Sbjct: 153 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 212
Query: 185 GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGL 215
+SD+WS G ++E+ F A AGL
Sbjct: 213 THQSDVWSYGVTVWELM----TFGAEPYAGL 239
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G FG + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 18 KLGGGQFGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL- 72
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+T + G++ + +++ N L Q+ A++YL
Sbjct: 73 -------LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HRDL N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 126 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D + + + + P + L++
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRA 245
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 246 CWQWNPSDRPSFAEI 260
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 11/204 (5%)
Query: 14 IGRGAFG---AAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEF 70
IG G FG +L +K+ V K A TE+ R E ++ + H I+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 71 KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVL 130
E + K + I+T Y E G + + +++ +G F +L + + YL + +
Sbjct: 112 -EGVISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYLANMNYV 169
Query: 131 HRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN----YMCPELLADIPYGF 186
HRDL NI + + ++ DFGL++ L+ D A+ + PE ++ +
Sbjct: 170 HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTS 229
Query: 187 KSDIWSLGCCMYEMAAH--RPAFK 208
SD+WS G M+E+ + RP ++
Sbjct: 230 ASDVWSFGIVMWEVMTYGERPYWE 253
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 27/278 (9%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHR--AEKKKYVLKKIRLARQTERCRRSAHQEMALI 59
E R +Y + Q+G+G FG+ L + + ++ +L +R +E+ ++
Sbjct: 9 EERHLKY--ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL 66
Query: 60 ARVQHPYIVEFKEAWVEKG-CYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLL 118
+ +IV+++ G + +V Y G + + +++ A +L + +Q+
Sbjct: 67 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQIC 125
Query: 119 LAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN-----Y 173
++YL S +HRDL NI + + V++ DFGLAK L D VV P +
Sbjct: 126 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYVVREPGQSPIFW 184
Query: 174 MCPELLADIPYGFKSDIWSLGCCMYEMAAH-----RPAFKAFDMAG-------LISKINR 221
PE L+D + +SD+WS G +YE+ + P+ + M G L +
Sbjct: 185 YAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLEL 244
Query: 222 SSIG---PLPSCYSPSLKTLIKGMLRKNPEHRPSASEL 256
G P P + L+K +P+ RPS S L
Sbjct: 245 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 282
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 21/230 (9%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR 61
E MD+YEI IG+G+FG + R E++ +K I+ + A E+ L+
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK---NKKAFLNQAQIEVRLLEL 106
Query: 62 V------QHPYIVEFKEAWVEKG--CYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
+ YIV K ++ + C V + Y ++ +L++ +N K+
Sbjct: 107 MNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY----NLYDLLRNTNFRGVSLNLTRKF 162
Query: 114 FAQLLLAVDYLHS--NYVLHRDLKCSNIFLT--KDQDVRLGDFGLAKTLKADDLASSVVG 169
Q+ A+ +L + ++H DLK NI L K +++ DFG + + +
Sbjct: 163 AQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQXIQ 220
Query: 170 TPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI 219
+ Y PE+L +PY D+WSLGC + EM P F + ++KI
Sbjct: 221 SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 270
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 7 QYEIMEQIGRGAFGAAI-LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP 65
+YE+++ IG+G FG + +H+ + +++ R +R R A +E+ ++ ++
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHV----ALKMVRNEKRFHRQAAEEIRILEHLRKQ 153
Query: 66 ------YIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
++ E + + ++C+ T ++ EL+KK+ F + K+ +L
Sbjct: 154 DKDNTMNVIHMLENFTFRN-HICM-TFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKD--QDVRLGDFGLAKTLKADDLASSVVGTPNYMCPE 177
+D LH N ++H DLK NI L + +++ DFG + + + Y PE
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG--SSCYEHQRVYXXIQSRFYRAPE 269
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRP 205
++ YG D+WSLGC + E+ P
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 21/230 (9%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR 61
E MD+YEI IG+G+FG + R E++ +K I+ + A E+ L+
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK---NKKAFLNQAQIEVRLLEL 106
Query: 62 V------QHPYIVEFKEAWVEKG--CYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKW 113
+ YIV K ++ + C V + Y ++ +L++ +N K+
Sbjct: 107 MNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY----NLYDLLRNTNFRGVSLNLTRKF 162
Query: 114 FAQLLLAVDYLHS--NYVLHRDLKCSNIFLT--KDQDVRLGDFGLAKTLKADDLASSVVG 169
Q+ A+ +L + ++H DLK NI L K +++ DFG + + +
Sbjct: 163 AQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFG--SSCQLGQRIYQXIQ 220
Query: 170 TPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKI 219
+ Y PE+L +PY D+WSLGC + EM P F + ++KI
Sbjct: 221 SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 270
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 112/255 (43%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 18 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL- 72
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+T + G++ + +++ N L Q+ A++YL
Sbjct: 73 -------LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HRDL N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 126 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYN 185
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D + + + + P + L++
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRA 245
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 246 CWQWNPSDRPSFAEI 260
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 133/298 (44%), Gaps = 49/298 (16%)
Query: 6 DQYEIM-EQIGRGAF----GAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIA 60
D Y++ E +G GA+ GA L N K+Y +K I +Q R +E+ +
Sbjct: 12 DMYKLTSELLGEGAYAKVQGAVSLQN----GKEYAVKIIE--KQAGHSRSRVFREVETLY 65
Query: 61 RVQ-HPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLL 119
+ Q + I+E E + E +V +GG + ++K +F E + + +
Sbjct: 66 QCQGNKNILELIE-FFEDDTRFYLVFEKLQGGSILAHIQKQK--HFNEREASRVVRDVAA 122
Query: 120 AVDYLHSNYVLHRDLKCSNIFL---TKDQDVRLGDFGLAKTLKADDLASSVV-------- 168
A+D+LH+ + HRDLK NI K V++ DF L +K ++ + +
Sbjct: 123 ALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 169 GTPNYMCPELLADIP-----YGFKSDIWSLGCCMYEMAAHRPAFKAFDMA------GLIS 217
G+ YM PE++ Y + D+WSLG +Y M + P F A G +
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVC 242
Query: 218 KINRSSIG--------PLP----SCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
++ ++ + P + S K LI +L ++ + R SA+++L+HP++Q
Sbjct: 243 RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 112/255 (43%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 20 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+ + G++ + +++ N L Q+ A++YL
Sbjct: 76 G--------VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HRDL N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D++ + + + P + L++
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 247
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 248 CWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 112/255 (43%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 20 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+ + G++ + +++ N L Q+ A++YL
Sbjct: 76 G--------VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HRDL N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 187
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D++ + + + P + L++
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA 247
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 248 CWQWNPSDRPSFAEI 262
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 112/248 (45%), Gaps = 9/248 (3%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 21 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
+ + I+ + G++ + +++ N L Q+ A++YL +H
Sbjct: 77 GVCTREPPFYIIIE-FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADIPYGFKSD 189
RDL N + ++ V++ DFGL++ + D A + P + PE LA + KSD
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 190 IWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPE 248
+W+ G ++E+A + + + D++ + + + P + L++ + NP
Sbjct: 196 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 255
Query: 249 HRPSASEL 256
RPS +E+
Sbjct: 256 DRPSFAEI 263
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 108/262 (41%), Gaps = 27/262 (10%)
Query: 12 EQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
+++G G FG + + K+ ++ + + E ++ +QH +V+
Sbjct: 188 KKLGAGQFGEVWMATY----NKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 243
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
++ Y I+T + G + + +K G+ P KL + AQ+ + ++ +H
Sbjct: 244 AVVTKEPIY--IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 301
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYGFKS 188
RDL+ +NI ++ ++ DFGLA+ VG + PE + + KS
Sbjct: 302 RDLRAANILVSASLVCKIADFGLAR-----------VGAKFPIKWTAPEAINFGSFTIKS 350
Query: 189 DIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNP 247
D+WS G + E+ + R + +I + R P P L ++ + P
Sbjct: 351 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRP 410
Query: 248 EHRPSASELLKHPFLQHFVDQY 269
E RP+ ++Q +D +
Sbjct: 411 EERPT------FEYIQSVLDDF 426
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 112/248 (45%), Gaps = 9/248 (3%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 25 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLH 131
+ + I+ + G++ + +++ N L Q+ A++YL +H
Sbjct: 81 GVCTREPPFYIIIE-FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 132 RDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADIPYGFKSD 189
RDL N + ++ V++ DFGL++ + D A + P + PE LA + KSD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 190 IWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPE 248
+W+ G ++E+A + + + D++ + + + P + L++ + NP
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPS 259
Query: 249 HRPSASEL 256
RPS +E+
Sbjct: 260 DRPSFAEI 267
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 14 IGRGAFGAAI-LVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIARV-QHPYIV 68
+G GAFG + K+ VLK +++ + T + + E+ +++ + QH IV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN------------GAYFPEEKLCKWFAQ 116
A G V ++T YC GD+ +++ + + L + +Q
Sbjct: 114 NLLGACTHGGP-VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQ 172
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN---- 172
+ + +L S +HRD+ N+ LT ++GDFGLA+ + D S+ + N
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND---SNYIVKGNARLP 229
Query: 173 --YMCPELLADIPYGFKSDIWSLGCCMYEM 200
+M PE + D Y +SD+WS G ++E+
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 13/211 (6%)
Query: 11 MEQIGRGAFGA---AILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
++ +G G FG + + K V K+ + + ++ M I + H +I
Sbjct: 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSN 127
V + G + +VT Y G + + +++ GA P+ L W Q+ + YL +
Sbjct: 78 VRLLG--LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQ-LLLNWGVQIAKGMYYLEEH 134
Query: 128 YVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD--LASSVVGTP-NYMCPELLADIPY 184
++HR+L N+ L V++ DFG+A L DD L S TP +M E + Y
Sbjct: 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 194
Query: 185 GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGL 215
+SD+WS G ++E+ F A AGL
Sbjct: 195 THQSDVWSYGVTVWELM----TFGAEPYAGL 221
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
++++++G G FG + + + K +K ++ + ++ +E L+ +QH +V
Sbjct: 16 KLVKRLGAGQFGE-VWMGYYNNSTKVAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLV 71
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
A V + + I+T Y G + + +K G KL + AQ+ + Y+
Sbjct: 72 RLY-AVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 130
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADIPYGF 186
+HRDL+ +N+ +++ ++ DFGLA+ ++ ++ A P + PE + +
Sbjct: 131 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTI 190
Query: 187 KSDIWSLGCCMYEMAAH 203
KSD+WS G +YE+ +
Sbjct: 191 KSDVWSFGILLYEIVTY 207
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
Y + IG G+FG + +KK+ + +R ++E+ ++ ++ H I
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNI 111
Query: 68 VEFKEAWVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQ 116
V + + G Y+ +V Y + E + + Y P + + Q
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQ 166
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMC 175
L ++ Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y
Sbjct: 167 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 226
Query: 176 PELL-ADIPYGFKSDIWSLGCCMYEMAAHRPAF 207
PEL+ Y D+WS GC + E+ +P F
Sbjct: 227 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
Y + IG G+FG + +KK+ + +R ++E+ ++ ++ H I
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNI 154
Query: 68 VEFKEAWVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQ 116
V + + G Y+ +V Y + E + + Y P + + Q
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQ 209
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMC 175
L ++ Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y
Sbjct: 210 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 269
Query: 176 PELL-ADIPYGFKSDIWSLGCCMYEMAAHRPAF 207
PEL+ Y D+WS GC + E+ +P F
Sbjct: 270 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
Y + IG G+FG + +KK+ + +R ++E+ ++ ++ H I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNI 109
Query: 68 VEFKEAWVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQ 116
V + + G Y+ +V Y + E + + Y P + + Q
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMC 175
L ++ Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 224
Query: 176 PELL-ADIPYGFKSDIWSLGCCMYEMAAHRPAF 207
PEL+ Y D+WS GC + E+ +P F
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
Y + IG G+FG + +KK+ + +R ++E+ ++ ++ H I
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNI 113
Query: 68 VEFKEAWVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQ 116
V + + G Y+ +V Y + E + + Y P + + Q
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMC 175
L ++ Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y
Sbjct: 169 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 228
Query: 176 PELL-ADIPYGFKSDIWSLGCCMYEMAAHRPAF 207
PEL+ Y D+WS GC + E+ +P F
Sbjct: 229 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
Y + IG G+FG + +KK+ + +R ++E+ ++ ++ H I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNI 109
Query: 68 VEFKEAWVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQ 116
V + + G Y+ +V Y + E + + Y P + + Q
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMC 175
L ++ Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 224
Query: 176 PELL-ADIPYGFKSDIWSLGCCMYEMAAHRPAF 207
PEL+ Y D+WS GC + E+ +P F
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
Y + IG G+FG + +KK+ + +R ++E+ ++ ++ H I
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNI 103
Query: 68 VEFKEAWVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQ 116
V + + G Y+ +V Y + E + + Y P + + Q
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQ 158
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMC 175
L ++ Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y
Sbjct: 159 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 218
Query: 176 PELL-ADIPYGFKSDIWSLGCCMYEMAAHRPAF 207
PEL+ Y D+WS GC + E+ +P F
Sbjct: 219 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 123/318 (38%), Gaps = 68/318 (21%)
Query: 8 YEIMEQIGRGAFGAAILVN---HRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
YE++ IG+G F + VN ++ + +++I L + E+ + H
Sbjct: 11 YELLTVIGKG-FEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNH 69
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV ++ ++ + +VT + G +L+ E + +L A+DY+
Sbjct: 70 PNIVPYRATFIADN-ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI 128
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK----------ADDLASSVVGTPNYM 174
H +HR +K S+I ++ D V L GL L D V ++
Sbjct: 129 HHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWL 186
Query: 175 CPELLADIPYGF--KSDIWSLGCCMYEMAAHRPAFKAFDMAG---LISKIN--------- 220
PE+L G+ KSDI+S+G E+A FK DM L+ K+N
Sbjct: 187 SPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK--DMPATQMLLEKLNGTVPCLLDT 244
Query: 221 ------------------------------RSSIGPLPS-----CYSPSLKTLIKGMLRK 245
R S G PS +SP ++ L++
Sbjct: 245 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQR 304
Query: 246 NPEHRPSASELLKHPFLQ 263
NP+ RPSAS LL H F +
Sbjct: 305 NPDARPSASTLLNHSFFK 322
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 42/283 (14%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
Y ++++G G F LV + Y LK+I Q +R A +E + HP
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDR--EEAQREADMHRLFNHPN 87
Query: 67 IVEF-----------KEAWVEKGCYVCIVTGYCEGGDMAELMK-KSNGAYFPEEKLCKWF 114
I+ EAW+ ++ + G E+ + K G + E+++
Sbjct: 88 ILRLVAYCLRERGAKHEAWL-------LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL 140
Query: 115 AQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLA-----------KTLKADDL 163
+ ++ +H+ HRDLK +NI L + L D G + L D
Sbjct: 141 LGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDW 200
Query: 164 ASSVVGTPNYMCPELLADIPYGF---KSDIWSLGCCMYEM----AAHRPAFKAFDMAGLI 216
A+ T +Y PEL + + ++D+WSLGC +Y M + F+ D L
Sbjct: 201 AAQRC-TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA 259
Query: 217 SKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ N+ SI P +S +L L+ M+ +P RP LL
Sbjct: 260 VQ-NQLSIPQSPR-HSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 14 IGRGAFGAAI-LVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIARV-QHPYIV 68
+G GAFG + K+ VLK +++ + T + + E+ +++ + QH IV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSN------------GAYFPEEKLCKWFAQ 116
A G V ++T YC GD+ +++ + + L + +Q
Sbjct: 114 NLLGACTHGGP-VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN---- 172
+ + +L S +HRD+ N+ LT ++GDFGLA+ + D S+ + N
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND---SNYIVKGNARLP 229
Query: 173 --YMCPELLADIPYGFKSDIWSLGCCMYEM 200
+M PE + D Y +SD+WS G ++E+
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 123/318 (38%), Gaps = 68/318 (21%)
Query: 8 YEIMEQIGRGAFGAAILVN---HRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
YE++ IG+G F + VN ++ + +++I L + E+ + H
Sbjct: 27 YELLTVIGKG-FEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNH 85
Query: 65 PYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
P IV ++ ++ + +VT + G +L+ E + +L A+DY+
Sbjct: 86 PNIVPYRATFIADN-ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI 144
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLK----------ADDLASSVVGTPNYM 174
H +HR +K S+I ++ D V L GL L D V ++
Sbjct: 145 HHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWL 202
Query: 175 CPELLADIPYGF--KSDIWSLGCCMYEMAAHRPAFKAFDMAG---LISKIN--------- 220
PE+L G+ KSDI+S+G E+A FK DM L+ K+N
Sbjct: 203 SPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK--DMPATQMLLEKLNGTVPCLLDT 260
Query: 221 ------------------------------RSSIGPLPS-----CYSPSLKTLIKGMLRK 245
R S G PS +SP ++ L++
Sbjct: 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQR 320
Query: 246 NPEHRPSASELLKHPFLQ 263
NP+ RPSAS LL H F +
Sbjct: 321 NPDARPSASTLLNHSFFK 338
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 31/256 (12%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERC-RRSAHQEMALIARVQHPYIVEFK 71
++G G FG+ +R KK+ + L + TE+ +E ++ ++ +PYIV
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR-- 74
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGA-----------YFPEEKLCKWFAQLLLA 120
+ G C+ + +M+ + G P + + Q+ +
Sbjct: 75 ------------LIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 122
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTP-NYMCP 176
+ YL +HRDL N+ L ++ DFGL+K L ADD A S P + P
Sbjct: 123 MKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 182
Query: 177 ELLADIPYGFKSDIWSLGCCMYEMAAH-RPAFKAFDMAGLISKINRSSIGPLPSCYSPSL 235
E + + +SD+WS G M+E ++ + +K +++ I + P P L
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPEL 242
Query: 236 KTLIKGMLRKNPEHRP 251
L+ E RP
Sbjct: 243 YALMSDCWIYKWEDRP 258
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHR-----AEKKKYVLKKIRLARQTERCRRSAHQEM 56
E + ME++G FG + H E+ + V K + R E
Sbjct: 22 EISLSAVRFMEELGEDRFGK-VYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 80
Query: 57 ALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELM---------------KKSN 101
L AR+QHP +V V K + ++ YC GD+ E + +
Sbjct: 81 MLRARLQHPNVVCLLGV-VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 139
Query: 102 GAYFPEEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD 161
A P + AQ+ ++YL S++V+H+DL N+ + +V++ D GL + + A
Sbjct: 140 SALEPPD-FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 198
Query: 162 D----LASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAH 203
D L +S++ +M PE + + SDIWS G ++E+ ++
Sbjct: 199 DYYKLLGNSLLPI-RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY 243
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
Y + IG G+FG + +KK+ + +R ++E+ ++ ++ H I
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNI 80
Query: 68 VEFKEAWVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQ 116
V + + G Y+ +V Y + E + + Y P + + Q
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQ 135
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMC 175
L ++ Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y
Sbjct: 136 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 195
Query: 176 PELL-ADIPYGFKSDIWSLGCCMYEMAAHRPAF 207
PEL+ Y D+WS GC + E+ +P F
Sbjct: 196 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 58/281 (20%)
Query: 32 KKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEAWVEKGCY----------- 80
K+ +KKI L + + A +E+ +I R+ H IV+ E G
Sbjct: 37 KRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTEL 94
Query: 81 --VCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSN 138
V IV Y E D+A ++++ EE + QLL + Y+HS VLHRDLK +N
Sbjct: 95 NSVYIVQEYMET-DLANVLEQGP---LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN 150
Query: 139 IFL-TKDQDVRLGDFGLAKTL-----KADDLASSVVGTPNYMCPELLADIP--YGFKSDI 190
+F+ T+D +++GDFGLA+ + L+ +V T Y P LL P Y D+
Sbjct: 151 LFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLS-PNNYTKAIDM 208
Query: 191 WSLGCCMYEMAAHRPAFKA----------FDMAGLISKINRSSIGPLPSCYSPS------ 234
W+ GC EM + F + ++ + +R + + Y +
Sbjct: 209 WAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPH 268
Query: 235 --LKTLIKGMLRK-----------NPEHRPSASELLKHPFL 262
L L+ G+ R+ +P R +A E L HP++
Sbjct: 269 KPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 36/219 (16%)
Query: 14 IGRGAFGAAI-LVNHRAEKKKYVLK-KIRLARQTERC--RRSAHQEMALIARV-QHPYIV 68
+G GAFG + K+ VLK +++ + T + + E+ +++ + QH IV
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYF---------PE------------ 107
A G V ++T YC GD+ +++ A PE
Sbjct: 99 NLLGA-CTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLEL 157
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
L + +Q+ + +L S +HRD+ N+ LT ++GDFGLA+ + D S+
Sbjct: 158 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND---SNY 214
Query: 168 VGTPN------YMCPELLADIPYGFKSDIWSLGCCMYEM 200
+ N +M PE + D Y +SD+WS G ++E+
Sbjct: 215 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 253
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
Y + IG G+FG + +KK+ + +R ++E+ ++ ++ H I
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNI 83
Query: 68 VEFKEAWVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQ 116
V + + G Y+ +V Y + E + + Y P + + Q
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQ 138
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMC 175
L ++ Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y
Sbjct: 139 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 198
Query: 176 PELL-ADIPYGFKSDIWSLGCCMYEMAAHRPAF 207
PEL+ Y D+WS GC + E+ +P F
Sbjct: 199 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
Y + IG G+FG + +KK+ + +R ++E+ ++ ++ H I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNI 87
Query: 68 VEFKEAWVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQ 116
V + + G Y+ +V Y + E + + Y P + + Q
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMC 175
L ++ Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 202
Query: 176 PELL-ADIPYGFKSDIWSLGCCMYEMAAHRPAF 207
PEL+ Y D+WS GC + E+ +P F
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
IG G+FG + +KK+ + +R ++E+ ++ ++ H IV +
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNIVRLRYF 94
Query: 74 WVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQLLLAVD 122
+ G Y+ +V Y + E + + Y P + + QL ++
Sbjct: 95 FYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMCPELL-A 180
Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y PEL+
Sbjct: 150 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 209
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAF 207
Y D+WS GC + E+ +P F
Sbjct: 210 ATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
IG G+FG + +KK+ + +R ++E+ ++ ++ H IV +
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNIVRLRYF 100
Query: 74 WVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQLLLAVD 122
+ G Y+ +V Y + E + + Y P + + QL ++
Sbjct: 101 FYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMCPELL-A 180
Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y PEL+
Sbjct: 156 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 215
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAF 207
Y D+WS GC + E+ +P F
Sbjct: 216 ATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 2 ESRMDQYEIMEQIGRGAFGAAILVNHR-----AEKKKYVLKKIRLARQTERCRRSAHQEM 56
E + ME++G FG + H E+ + V K + R E
Sbjct: 5 EISLSAVRFMEELGEDRFGK-VYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 57 ALIARVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELM---------------KKSN 101
L AR+QHP +V V K + ++ YC GD+ E + +
Sbjct: 64 MLRARLQHPNVVCLLGV-VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 102 GAYFPEEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKAD 161
A P + AQ+ ++YL S++V+H+DL N+ + +V++ D GL + + A
Sbjct: 123 SALEPPD-FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 181
Query: 162 D----LASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAH 203
D L +S++ +M PE + + SDIWS G ++E+ ++
Sbjct: 182 DYYKLLGNSLLPI-RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY 226
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 8 YEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYI 67
Y + IG G+FG + +KK+ + +R ++E+ ++ ++ H I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNI 87
Query: 68 VEFKEAWVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQ 116
V + + G Y+ +V Y + E + + Y P + + Q
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 117 LLLAVDYLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMC 175
L ++ Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 202
Query: 176 PELL-ADIPYGFKSDIWSLGCCMYEMAAHRPAF 207
PEL+ Y D+WS GC + E+ +P F
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 5 MDQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQH 64
+Q EI E IG+G FG V H + ++ I + R E ++ +E+ + +H
Sbjct: 32 FEQLEIGELIGKGRFGQ---VYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRH 88
Query: 65 PYIVEFKEAWVEKGC----YVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLA 120
+V F A C ++ I+T C+G + +++ + K + +++
Sbjct: 89 ENVVLFMGA-----CMSPPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKG 142
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGL---AKTLKADDLASSVVGTPNYMC-- 175
+ YLH+ +LH+DLK N+F + V + DFGL + L+A + ++C
Sbjct: 143 MGYLHAKGILHKDLKSKNVFYDNGK-VVITDFGLFSISGVLQAGRREDKLRIQNGWLCHL 201
Query: 176 -PELLAD---------IPYGFKSDIWSLGCCMYEMAAHRPAFK 208
PE++ +P+ SD+++LG YE+ A FK
Sbjct: 202 APEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK 244
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 117/268 (43%), Gaps = 24/268 (8%)
Query: 13 QIGRGAFGAAIL---VNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
++G GAFG L N K K ++ L T R+ +E L+ +QH +IV+
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMK--------------KSNGAYFPEEKLCKWFA 115
F G + +V Y + GD+ + ++ + ++ +
Sbjct: 82 FYGV-CGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 116 QLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTPN 172
Q+ + YL S + +HRDL N + + V++GDFG+++ + + D + +
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 200
Query: 173 YMCPELLADIPYGFKSDIWSLGCCMYEMAAH--RPAFKAFDMAGLISKINRSSIGPLPSC 230
+M PE + + +SD+WS G ++E+ + +P F+ + +I I + + P
Sbjct: 201 WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-VIECITQGRVLERPRV 259
Query: 231 YSPSLKTLIKGMLRKNPEHRPSASELLK 258
+ ++ G ++ P+ R + E+ K
Sbjct: 260 CPKEVYDVMLGCWQREPQQRLNIKEIYK 287
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Query: 9 EIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIV 68
++++++G G FG + + + K +K ++ + ++ +E L+ +QH +V
Sbjct: 15 KLVKKLGAGQFGE-VWMGYYNNSTKVAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLV 70
Query: 69 EFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNY 128
A V K + I+T + G + + +K G KL + AQ+ + Y+
Sbjct: 71 RLY-AVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 129
Query: 129 VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADIPYGF 186
+HRDL+ +N+ +++ ++ DFGLA+ ++ ++ A P + PE + +
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTI 189
Query: 187 KSDIWSLGCCMYEMAAH 203
KS++WS G +YE+ +
Sbjct: 190 KSNVWSFGILLYEIVTY 206
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 111/255 (43%), Gaps = 23/255 (9%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLK-KIRLARQTERCRRSAHQEMALIARVQHPYIVEFK 71
++G G +G + KKY L ++ ++ +E A++ ++HP +V+
Sbjct: 18 KLGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 72 EAWVEKGCYVC-------IVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYL 124
VC I+ + G++ + +++ N L Q+ A++YL
Sbjct: 74 G--------VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 125 HSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL-ASSVVGTP-NYMCPELLADI 182
+HRDL N + ++ V++ DFGL++ + D A + P + PE LA
Sbjct: 126 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 183 PYGFKSDIWSLGCCMYEMAAHRPA-FKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKG 241
+ KSD+W+ G ++E+A + + + D + + + + P + L++
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRA 245
Query: 242 MLRKNPEHRPSASEL 256
+ NP RPS +E+
Sbjct: 246 CWQWNPSDRPSFAEI 260
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 63.2 bits (152), Expect = 8e-10, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 39/191 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ +LL A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 151 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 210
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D+ Y + D+WSLGC M + F K GL
Sbjct: 211 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 270
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
+ +N+ I P SP + +LR + + R +A
Sbjct: 271 AYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 330
Query: 254 SELLKHPFLQH 264
E + HP+ Q
Sbjct: 331 LEAMTHPYFQQ 341
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
IG G+FG + +KK+ + +R ++E+ ++ ++ H IV +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 74 WVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQLLLAVD 122
+ G Y+ +V Y + E + + Y P + + QL ++
Sbjct: 82 FYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMCPELL-A 180
Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y PEL+
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAF 207
Y D+WS GC + E+ +P F
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
IG G+FG + +KK+ + +R ++E+ ++ ++ H IV +
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNIVRLRYF 82
Query: 74 WVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQLLLAVD 122
+ G Y+ +V Y + E + + Y P + + QL ++
Sbjct: 83 FYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMCPELL-A 180
Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y PEL+
Sbjct: 138 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 197
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAF 207
Y D+WS GC + E+ +P F
Sbjct: 198 ATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
IG G+FG + +KK+ + +R ++E+ ++ ++ H IV +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 74 WVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQLLLAVD 122
+ G Y+ +V Y + E + + Y P + + QL ++
Sbjct: 82 FYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMCPELL-A 180
Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y PEL+
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAF 207
Y D+WS GC + E+ +P F
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
IG G+FG + +KK+ + +R ++E+ ++ ++ H IV +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 74 WVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQLLLAVD 122
+ G Y+ +V Y + E + + Y P + + QL ++
Sbjct: 82 FYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMCPELL-A 180
Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y PEL+
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAF 207
Y D+WS GC + E+ +P F
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
IG G+FG + +KK+ + +R ++E+ ++ ++ H IV +
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNIVRLRYF 85
Query: 74 WVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQLLLAVD 122
+ G Y+ +V Y + E + + Y P + + QL ++
Sbjct: 86 FYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMCPELL-A 180
Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y PEL+
Sbjct: 141 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 200
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAF 207
Y D+WS GC + E+ +P F
Sbjct: 201 ATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
IG G+FG + +KK+ + +R ++E+ ++ ++ H IV +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL------QDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 74 WVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQLLLAVD 122
+ G Y+ +V Y + E + + Y P + + QL ++
Sbjct: 82 FYSSGEKKDVVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMCPELL-A 180
Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y PEL+
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAF 207
Y D+WS GC + E+ +P F
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 40/207 (19%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLASSVVGTP 171
+ +LL A+DY HS ++HRD+K N+ + Q +RL D+GLA+ + V +
Sbjct: 137 YMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR 196
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKI--NRSSI 224
+ PELL D Y + D+WSLGC + M R F +D I+K+
Sbjct: 197 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELY 256
Query: 225 GPLPSCY-------------------------------SPSLKTLIKGMLRKNPEHRPSA 253
G L + SP L+ +LR + + R +A
Sbjct: 257 GYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTA 316
Query: 254 SELLKHPFLQHFV-DQYRPTFPPAACS 279
E ++HP+ V +Q +P+ A S
Sbjct: 317 KEAMEHPYFYPVVKEQSQPSADNAVLS 343
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL---ASSVVGTPNYMCPELL 179
YL++N +HRDL N + +D V++GDFG+ + + D + +M PE L
Sbjct: 138 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESL 197
Query: 180 ADIPYGFKSDIWSLGCCMYEMA--AHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
D + SD+WS G ++E+A A +P ++ ++ + + P L
Sbjct: 198 KDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLRFVMEGGLLDKPDNCPDMLLE 256
Query: 238 LIKGMLRKNPEHRPSASELL 257
L++ + NP+ RPS E++
Sbjct: 257 LMRMCWQYNPKMRPSFLEII 276
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL---ASSVVGTPNYMCPELL 179
YL++N +HRDL N + +D V++GDFG+ + + D + +M PE L
Sbjct: 147 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESL 206
Query: 180 ADIPYGFKSDIWSLGCCMYEMA--AHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
D + SD+WS G ++E+A A +P ++ ++ + + P L
Sbjct: 207 KDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFE 265
Query: 238 LIKGMLRKNPEHRPSASELL 257
L++ + NP+ RPS E++
Sbjct: 266 LMRMCWQYNPKMRPSFLEII 285
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL---ASSVVGTPNYMCPELL 179
YL++N +HRDL N + +D V++GDFG+ + + D + +M PE L
Sbjct: 140 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 199
Query: 180 ADIPYGFKSDIWSLGCCMYEMA--AHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
D + SD+WS G ++E+A A +P ++ ++ + + P L
Sbjct: 200 KDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFE 258
Query: 238 LIKGMLRKNPEHRPSASELL 257
L++ + NP+ RPS E++
Sbjct: 259 LMRMCWQYNPKMRPSFLEII 278
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL---ASSVVGTPNYMCPELL 179
YL++N +HRDL N + +D V++GDFG+ + + D + +M PE L
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 212
Query: 180 ADIPYGFKSDIWSLGCCMYEMA--AHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
D + SD+WS G ++E+A A +P ++ ++ + + P L
Sbjct: 213 KDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFE 271
Query: 238 LIKGMLRKNPEHRPSASELL 257
L++ + NP+ RPS E++
Sbjct: 272 LMRMCWQYNPKMRPSFLEII 291
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL---ASSVVGTPNYMCPELL 179
YL++N +HRDL N + +D V++GDFG+ + + D + +M PE L
Sbjct: 144 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 203
Query: 180 ADIPYGFKSDIWSLGCCMYEMA--AHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
D + SD+WS G ++E+A A +P ++ ++ + + P L
Sbjct: 204 KDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFE 262
Query: 238 LIKGMLRKNPEHRPSASELL 257
L++ + NP+ RPS E++
Sbjct: 263 LMRMCWQYNPKMRPSFLEII 282
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ +LL A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D+ Y + D+WSLGC M + F K GL
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 250
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
+N+ I P SP + +LR + + R +A
Sbjct: 251 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 310
Query: 254 SELLKHPFLQH 264
E + HP+ Q
Sbjct: 311 LEAMTHPYFQQ 321
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ +LL A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D+ Y + D+WSLGC M + F K GL
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
+N+ I P SP + +LR + + R +A
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 254 SELLKHPFLQH 264
E + HP+ Q
Sbjct: 310 LEAMTHPYFQQ 320
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ +LL A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D+ Y + D+WSLGC M + F K GL
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
+N+ I P SP + +LR + + R +A
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 254 SELLKHPFLQH 264
E + HP+ Q
Sbjct: 310 LEAMTHPYFQQ 320
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ +LL A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D+ Y + D+WSLGC M + F K GL
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
+N+ I P SP + +LR + + R +A
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 254 SELLKHPFLQH 264
E + HP+ Q
Sbjct: 310 LEAMTHPYFQQ 320
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ +LL A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 132 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 191
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D+ Y + D+WSLGC M + F K GL
Sbjct: 192 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 251
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
+N+ I P SP + +LR + + R +A
Sbjct: 252 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 311
Query: 254 SELLKHPFLQH 264
E + HP+ Q
Sbjct: 312 LEAMTHPYFQQ 322
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ +LL A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D+ Y + D+WSLGC M + F K GL
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
+N+ I P SP + +LR + + R +A
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 254 SELLKHPFLQH 264
E + HP+ Q
Sbjct: 310 LEAMTHPYFQQ 320
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ +LL A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D+ Y + D+WSLGC M + F K GL
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
+N+ I P SP + +LR + + R +A
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 254 SELLKHPFLQH 264
E + HP+ Q
Sbjct: 310 LEAMTHPYFQQ 320
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL---ASSVVGTPNYMCPELL 179
YL++N +HRDL N + +D V++GDFG+ + + D + +M PE L
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 205
Query: 180 ADIPYGFKSDIWSLGCCMYEMA--AHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
D + SD+WS G ++E+A A +P ++ ++ + + P L
Sbjct: 206 KDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFE 264
Query: 238 LIKGMLRKNPEHRPSASELL 257
L++ + NP+ RPS E++
Sbjct: 265 LMRMCWQYNPKMRPSFLEII 284
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL---ASSVVGTPNYMCPELL 179
YL++N +HRDL N + +D V++GDFG+ + + D + +M PE L
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 212
Query: 180 ADIPYGFKSDIWSLGCCMYEMA--AHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
D + SD+WS G ++E+A A +P ++ ++ + + P L
Sbjct: 213 KDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFE 271
Query: 238 LIKGMLRKNPEHRPSASELL 257
L++ + NP+ RPS E++
Sbjct: 272 LMRMCWQYNPKMRPSFLEII 291
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ +LL A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D+ Y + D+WSLGC M + F K GL
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 250
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
+N+ I P SP + +LR + + R +A
Sbjct: 251 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 310
Query: 254 SELLKHPFLQH 264
E + HP+ Q
Sbjct: 311 LEAMTHPYFQQ 321
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ +LL A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D+ Y + D+WSLGC M + F K GL
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
+N+ I P SP + +LR + + R +A
Sbjct: 250 VYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTA 309
Query: 254 SELLKHPFLQH 264
E + HP+ Q
Sbjct: 310 LEAMTHPYFQQ 320
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL---ASSVVGTPNYMCPELL 179
YL++N +HRDL N + +D V++GDFG+ + + D + +M PE L
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 205
Query: 180 ADIPYGFKSDIWSLGCCMYEMA--AHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
D + SD+WS G ++E+A A +P ++ ++ + + P L
Sbjct: 206 KDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFE 264
Query: 238 LIKGMLRKNPEHRPSASELL 257
L++ + NP+ RPS E++
Sbjct: 265 LMRMCWQYNPKMRPSFLEII 284
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL---ASSVVGTPNYMCPELL 179
YL++N +HRDL N + +D V++GDFG+ + + D + +M PE L
Sbjct: 143 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 202
Query: 180 ADIPYGFKSDIWSLGCCMYEMA--AHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
D + SD+WS G ++E+A A +P ++ ++ + + P L
Sbjct: 203 KDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFE 261
Query: 238 LIKGMLRKNPEHRPSASELL 257
L++ + NP+ RPS E++
Sbjct: 262 LMRMCWQYNPKMRPSFLEII 281
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL---ASSVVGTPNYMCPELL 179
YL++N +HRDL N + +D V++GDFG+ + + D + +M PE L
Sbjct: 147 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 206
Query: 180 ADIPYGFKSDIWSLGCCMYEMA--AHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
D + SD+WS G ++E+A A +P ++ ++ + + P L
Sbjct: 207 KDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFE 265
Query: 238 LIKGMLRKNPEHRPSASELL 257
L++ + NP+ RPS E++
Sbjct: 266 LMRMCWQYNPKMRPSFLEII 285
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLG-----DFGLAKTLKADDLASSV 167
+F Q++ A+ + HS V+HRD+K NI + D+R G DFG + L D+ +
Sbjct: 144 FFGQVVAAIQHCHSRGVVHRDIKDENILI----DLRRGCAKLIDFG-SGALLHDEPYTDF 198
Query: 168 VGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGP 226
GT Y PE ++ Y + +WSLG +Y+M F+ D L ++++
Sbjct: 199 DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER-DQEILEAELH------ 251
Query: 227 LPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
P+ SP LI+ L P RPS E+L P++Q
Sbjct: 252 FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQ 288
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPY 66
QYE+ I G G L R + V+ K + + A E +A V HP
Sbjct: 81 QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPS 140
Query: 67 IVE---FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDY 123
IV+ F E G V + GG + +K+S G P + + ++L A+ Y
Sbjct: 141 IVQIFNFVEHTDRHGDPVGYIVMEYVGG---QSLKRSKGQKLPVAEAIAYLLEILPALSY 197
Query: 124 LHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIP 183
LHS +++ DLK NI LT++Q ++L D G + + + GTP + PE++ P
Sbjct: 198 LHSIGLVYNDLKPENIMLTEEQ-LKLIDLGAVSRINS---FGYLYGTPGFQAPEIVRTGP 253
Query: 184 YGFKSDIWSLGCCMYEMAAHRP 205
+DI+++G + + P
Sbjct: 254 T-VATDIYTVGRTLAALTLDLP 274
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 148 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 206
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 260
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 261 F-FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 82 CIVTGYCEGGDMAELMKKSNGAY-FPEEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIF 140
++ +C G + ++++ + AY PE + ++ +++L N ++HR++K NI
Sbjct: 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
Query: 141 LTKDQD----VRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI--------PYGFKS 188
+D +L DFG A+ L+ D+ S+ GT Y+ P++ YG
Sbjct: 145 RVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATV 204
Query: 189 DIWSLGCCMYEMAAHRPAFKAFD 211
D+WS+G Y A F+ F+
Sbjct: 205 DLWSIGVTFYHAATGSLPFRPFE 227
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 187
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 241
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 242 F-FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLASSVVGTP 171
+ +LL A+DY HS ++HRD+K N+ + Q +RL D+GLA+ + V +
Sbjct: 142 YMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR 201
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF----KAFDMAGLISKI--NRSSI 224
+ PELL D Y + D+WSLGC + M R F +D I+K+
Sbjct: 202 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELY 261
Query: 225 GPLPSCY-------------------------------SPSLKTLIKGMLRKNPEHRPSA 253
G L + SP L+ +LR + + R +A
Sbjct: 262 GYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTA 321
Query: 254 SELLKHPFLQHFVDQ 268
E ++HP+ V +
Sbjct: 322 KEAMEHPYFYPVVKE 336
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 128 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 186
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 240
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 241 F-FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 187
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 241
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 242 F-FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 128 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 186
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 240
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 241 F-FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 30/207 (14%)
Query: 13 QIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERC-RRSAHQEMALIARVQHPYIVEFK 71
++G G FG+ +R KK+ + L + TE+ +E ++ ++ +PYIV
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR-- 400
Query: 72 EAWVEKGCYVCIVTGYCEGGDMAELMKKSNGA-----------YFPEEKLCKWFAQLLLA 120
+ G C+ + +M+ + G P + + Q+ +
Sbjct: 401 ------------LIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 448
Query: 121 VDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASSVVGTP-NYMCP 176
+ YL +HR+L N+ L ++ DFGL+K L ADD A S P + P
Sbjct: 449 MKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 508
Query: 177 ELLADIPYGFKSDIWSLGCCMYEMAAH 203
E + + +SD+WS G M+E ++
Sbjct: 509 ECINFRKFSSRSDVWSYGVTMWEALSY 535
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 14/202 (6%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
IG G+FG + +KK+ + + ++E+ ++ ++ H IV +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK------NRELQIMRKLDHCNIVRLRYF 81
Query: 74 WVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY-FPEEKLCKWFAQLLLAVDYLHSN 127
+ G Y+ +V Y S P + + QL ++ Y+HS
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 128 YVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMCPELL-ADIPYG 185
+ HRD+K N+ L D V +L DFG AK L + S + + Y PEL+ Y
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYT 201
Query: 186 FKSDIWSLGCCMYEMAAHRPAF 207
D+WS GC + E+ +P F
Sbjct: 202 SSIDVWSAGCVLAELLLGQPIF 223
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL---ASSVVGTPNYMCPELL 179
YL++N +HRDL N + +D V++GDFG+ + + D + +M PE L
Sbjct: 140 YLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 199
Query: 180 ADIPYGFKSDIWSLGCCMYEMA--AHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
D + SD+WS G ++E+A A +P ++ ++ + + P L
Sbjct: 200 KDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLRFVMEGGLLDKPDNCPDMLLE 258
Query: 238 LIKGMLRKNPEHRPSASELL 257
L++ + NP+ RPS E++
Sbjct: 259 LMRMCWQYNPKMRPSFLEII 278
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
IG G+FG + +KK+ + + ++E+ ++ ++ H IV +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK------NRELQIMRKLDHCNIVRLRYF 81
Query: 74 WVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQLLLAVD 122
+ G Y+ +V Y + E + + Y P + + QL ++
Sbjct: 82 FYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMCPELL-A 180
Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y PEL+
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAF 207
Y D+WS GC + E+ +P F
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 199
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 253
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 254 F-FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 199
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFD--MAGLISKINRS 222
GT Y PE + Y G + +WSLG +Y+M F+ + + G + R
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV 259
Query: 223 SIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S C + LI+ L P RP+ E+ HP++Q
Sbjct: 260 S----SEC-----QHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 199
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFD--MAGLISKINRS 222
GT Y PE + Y G + +WSLG +Y+M F+ + + G + R
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV 259
Query: 223 SIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S C + LI+ L P RP+ E+ HP++Q
Sbjct: 260 S----SEC-----QHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 14 IGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVEFKEA 73
IG G+FG + +KK+ + + ++E+ ++ ++ H IV +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK------NRELQIMRKLDHCNIVRLRYF 81
Query: 74 WVEKG-----CYVCIVTGYCEGGDMAELMKKSNGAY------FPEEKLCKWFAQLLLAVD 122
+ G Y+ +V Y + E + + Y P + + QL ++
Sbjct: 82 FYSSGEKKDEVYLNLVLDY-----VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDV-RLGDFGLAKTLKADDLASSVVGTPNYMCPELL-A 180
Y+HS + HRD+K N+ L D V +L DFG AK L + S + + Y PEL+
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 181 DIPYGFKSDIWSLGCCMYEMAAHRPAF 207
Y D+WS GC + E+ +P F
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 200
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFD--MAGLISKINRS 222
GT Y PE + Y G + +WSLG +Y+M F+ + + G + R
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV 260
Query: 223 SIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S C + LI+ L P RP+ E+ HP++Q
Sbjct: 261 S----XEC-----QHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 214
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 268
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 269 F-FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 200
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFD--MAGLISKINRS 222
GT Y PE + Y G + +WSLG +Y+M F+ + + G + R
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV 260
Query: 223 SIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S C + LI+ L P RP+ E+ HP++Q
Sbjct: 261 S----XEC-----QHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 200
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFD--MAGLISKINRS 222
GT Y PE + Y G + +WSLG +Y+M F+ + + G + R
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV 260
Query: 223 SIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S C + LI+ L P RP+ E+ HP++Q
Sbjct: 261 S----SEC-----QHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 200
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFD--MAGLISKINRS 222
GT Y PE + Y G + +WSLG +Y+M F+ + + G + R
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV 260
Query: 223 SIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S C + LI+ L P RP+ E+ HP++Q
Sbjct: 261 S----SEC-----QHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDLA 164
E +C F Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 198 EHLICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 256
Query: 165 SSVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKI 219
P +M PE + D Y +SD+WS G ++E+ A+ P K + ++
Sbjct: 257 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRL 314
Query: 220 NRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ P +P + + P RP+ SEL++H
Sbjct: 315 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ ++ + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFP 106
H +V A + G + ++ +C+ G+++ ++ + P
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 161 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 219
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 220 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 273
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 274 F-FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 311
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 199
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFD--MAGLISKINRS 222
GT Y PE + Y G + +WSLG +Y+M F+ + + G + R
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV 259
Query: 223 SIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S C + LI+ L P RP+ E+ HP++Q
Sbjct: 260 S----XEC-----QHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDLA 164
E +C F Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 200 EHLICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 258
Query: 165 SSVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKI 219
P +M PE + D Y +SD+WS G ++E+ A+ P K + ++
Sbjct: 259 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRL 316
Query: 220 NRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ P +P + + P RP+ SEL++H
Sbjct: 317 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ ++ + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFP 106
H +V A + G + ++ +C+ G+++ ++ + P
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 214
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 268
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 269 F-FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 214
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 268
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 269 F-FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 109 EELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 167
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 221
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 222 F-FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDLA 164
E +C F Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 193 EHLICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 251
Query: 165 SSVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKI 219
P +M PE + D Y +SD+WS G ++E+ A+ P K + ++
Sbjct: 252 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRL 309
Query: 220 NRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ P +P + + P RP+ SEL++H
Sbjct: 310 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ ++ + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFP 106
H +V A + G + ++ +C+ G+++ ++ + P
Sbjct: 82 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 127
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKA--DDLA 164
E +C F Q+ +++L S +HRDL NI L++ V++ DFGLA+ + D +
Sbjct: 191 EHLICYSF-QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 249
Query: 165 SSVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEM----AAHRPAFKAFDMAGLISKI 219
P +M PE + D Y +SD+WS G ++E+ A+ P K + ++
Sbjct: 250 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRL 307
Query: 220 NRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKH 259
+ P +P + + P RP+ SEL++H
Sbjct: 308 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 347
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMA-----LIA 60
D+ ++ + +GRGAFG I + K + + + E S H+ + LI
Sbjct: 20 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 79
Query: 61 RVQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFP 106
H +V A + G + ++ +C+ G+++ ++ + P
Sbjct: 80 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 125
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 26/176 (14%)
Query: 100 SNGAY---FPEEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAK 156
S+G Y E L + Q+ +++L S +HRDL NI L+++ V++ DFGLA+
Sbjct: 188 SDGFYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLAR 247
Query: 157 TLKA--DDLASSVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMA 213
+ D + P +M PE + D Y KSD+WS G ++E+ F +
Sbjct: 248 DIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEI---------FSLG 298
Query: 214 G-----------LISKINRSSIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLK 258
G S++ P +P + ++ ++P+ RP +EL++
Sbjct: 299 GSPYPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVE 354
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/105 (19%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 6 DQYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQ----EMALIAR 61
++ ++ + +GRGAFG + + KK + + + E S ++ E+ ++
Sbjct: 27 ERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTH 86
Query: 62 VQHPY-IVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYF 105
+ H +V A ++G + ++ YC+ G+++ +K +F
Sbjct: 87 IGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFF 131
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 33/212 (15%)
Query: 7 QYEIMEQIGRGAFGAAI--LVNHRAEKKKY--VLKKIRLARQTERCRRSAHQEMALIARV 62
+++ ++ +G GAFG L EK K +K++R A + + + E ++A V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASV 75
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGA----YFPEEK-------LC 111
+P+ VC + G C + +M+ Y E K L
Sbjct: 76 DNPH--------------VCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLL 121
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP 171
W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++ G
Sbjct: 122 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 172 ---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
+M E + Y +SD+WS G ++E+
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWEL 213
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 33/212 (15%)
Query: 7 QYEIMEQIGRGAFGAAI--LVNHRAEKKKY--VLKKIRLARQTERCRRSAHQEMALIARV 62
+++ ++ +G GAFG L EK K +K++R A + + + E ++A V
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASV 78
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGA----YFPEEK-------LC 111
+P+ VC + G C + +M+ Y E K L
Sbjct: 79 DNPH--------------VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL 124
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP 171
W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++ G
Sbjct: 125 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 172 ---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
+M E + Y +SD+WS G ++E+
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWEL 216
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 14/161 (8%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 109 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 167
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFD--MAGLISKINRS 222
GT Y PE + Y G + +WSLG +Y+M F+ + + G + R
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR- 226
Query: 223 SIGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 227 --------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 109 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 167
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 221
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 222 F-FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 55 EMALIARVQHPYIVEF-----KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK 109
E ++ ++ +PYIV E+W+ +V E G + + ++++ + ++
Sbjct: 56 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 106
Query: 110 LCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASS 166
+ + Q+ + + YL + +HRDL N+ L ++ DFGL+K L+AD+ A +
Sbjct: 107 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 166
Query: 167 VVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYE 199
P + PE + + KSD+WS G M+E
Sbjct: 167 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 55 EMALIARVQHPYIVEF-----KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK 109
E ++ ++ +PYIV E+W+ +V E G + + ++++ + ++
Sbjct: 68 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 118
Query: 110 LCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASS 166
+ + Q+ + + YL + +HRDL N+ L ++ DFGL+K L+AD+ A +
Sbjct: 119 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 178
Query: 167 VVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYE 199
P + PE + + KSD+WS G M+E
Sbjct: 179 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 55 EMALIARVQHPYIVEF-----KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK 109
E ++ ++ +PYIV E+W+ +V E G + + ++++ + ++
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 108
Query: 110 LCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASS 166
+ + Q+ + + YL + +HRDL N+ L ++ DFGL+K L+AD+ A +
Sbjct: 109 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168
Query: 167 VVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYE 199
P + PE + + KSD+WS G M+E
Sbjct: 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 55 EMALIARVQHPYIVEF-----KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK 109
E ++ ++ +PYIV E+W+ +V E G + + ++++ + ++
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 112
Query: 110 LCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASS 166
+ + Q+ + + YL + +HRDL N+ L ++ DFGL+K L+AD+ A +
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 172
Query: 167 VVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYE 199
P + PE + + KSD+WS G M+E
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 55 EMALIARVQHPYIVEF-----KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK 109
E ++ ++ +PYIV E+W+ +V E G + + ++++ + ++
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 112
Query: 110 LCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASS 166
+ + Q+ + + YL + +HRDL N+ L ++ DFGL+K L+AD+ A +
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQT 172
Query: 167 VVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYE 199
P + PE + + KSD+WS G M+E
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 112 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 170
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 224
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 225 F-FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 262
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 33/212 (15%)
Query: 7 QYEIMEQIGRGAFGAAI--LVNHRAEKKKY--VLKKIRLARQTERCRRSAHQEMALIARV 62
+++ ++ +G GAFG L EK K +K++R A + + + E ++A V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASV 75
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGA----YFPEEK-------LC 111
+P+ VC + G C + +M+ Y E K L
Sbjct: 76 DNPH--------------VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL 121
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP 171
W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++ G
Sbjct: 122 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 172 ---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
+M E + Y +SD+WS G ++E+
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWEL 213
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 33/212 (15%)
Query: 7 QYEIMEQIGRGAFGAAI--LVNHRAEKKKY--VLKKIRLARQTERCRRSAHQEMALIARV 62
+++ ++ +G GAFG L EK K +K++R A + + + E ++A V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASV 76
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGA----YFPEEK-------LC 111
+P+ VC + G C + +M+ Y E K L
Sbjct: 77 DNPH--------------VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP 171
W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++ G
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 172 ---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
+M E + Y +SD+WS G ++E+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 33/212 (15%)
Query: 7 QYEIMEQIGRGAFGAAI--LVNHRAEKKKY--VLKKIRLARQTERCRRSAHQEMALIARV 62
+++ ++ +G GAFG L EK K +K++R A + + + E ++A V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASV 77
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGA----YFPEEK-------LC 111
+P+ VC + G C + +M+ Y E K L
Sbjct: 78 DNPH--------------VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL 123
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP 171
W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++ G
Sbjct: 124 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 172 ---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
+M E + Y +SD+WS G ++E+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 33/212 (15%)
Query: 7 QYEIMEQIGRGAFGAAI--LVNHRAEKKKY--VLKKIRLARQTERCRRSAHQEMALIARV 62
+++ ++ +G GAFG L EK K +K++R A + + + E ++A V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASV 74
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGA----YFPEEK-------LC 111
+P+ VC + G C + +M+ Y E K L
Sbjct: 75 DNPH--------------VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP 171
W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++ G
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 172 ---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
+M E + Y +SD+WS G ++E+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 55 EMALIARVQHPYIVEF-----KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK 109
E ++ ++ +PYIV E+W+ +V E G + + ++++ + ++
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 470
Query: 110 LCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASS 166
+ + Q+ + + YL + +HRDL N+ L ++ DFGL+K L+AD+ A +
Sbjct: 471 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530
Query: 167 VVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH 203
P + PE + + KSD+WS G M+E ++
Sbjct: 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY 568
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 55 EMALIARVQHPYIVEF-----KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK 109
E ++ ++ +PYIV E+W+ +V E G + + ++++ + ++
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 471
Query: 110 LCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASS 166
+ + Q+ + + YL + +HRDL N+ L ++ DFGL+K L+AD+ A +
Sbjct: 472 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 531
Query: 167 VVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEMAAH 203
P + PE + + KSD+WS G M+E ++
Sbjct: 532 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY 569
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 55 EMALIARVQHPYIVEF-----KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK 109
E ++ ++ +PYIV E+W+ +V E G + + ++++ + ++
Sbjct: 76 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 126
Query: 110 LCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASS 166
+ + Q+ + + YL + +HRDL N+ L ++ DFGL+K L+AD+ A +
Sbjct: 127 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 186
Query: 167 VVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYE 199
P + PE + + KSD+WS G M+E
Sbjct: 187 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 11/201 (5%)
Query: 7 QYEIMEQIGRGAFGAAI--LVNHRAEKKKY--VLKKIRLARQTERCRRSAHQEMALIARV 62
+++ ++ +G GAFG L EK K +K++R A + + + E ++A V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASV 74
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVD 122
+P++ + V ++T G + + +++ + L W Q+ ++
Sbjct: 75 DNPHVCRLLGICLTST--VQLITQLMPFGXLLDYVREHKDN-IGSQYLLNWCVQIAKGMN 131
Query: 123 YLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELL 179
YL ++HRDL N+ + Q V++ DFGLAK L A++ G +M E +
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 180 ADIPYGFKSDIWSLGCCMYEM 200
Y +SD+WS G ++E+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWEL 212
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 55 EMALIARVQHPYIVEF-----KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK 109
E ++ ++ +PYIV E+W+ +V E G + + ++++ + ++
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 128
Query: 110 LCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASS 166
+ + Q+ + + YL + +HRDL N+ L ++ DFGL+K L+AD+ A +
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 167 VVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYE 199
P + PE + + KSD+WS G M+E
Sbjct: 189 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 55 EMALIARVQHPYIVEF-----KEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK 109
E ++ ++ +PYIV E+W+ +V E G + + ++++ + ++
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 128
Query: 110 LCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD---LASS 166
+ + Q+ + + YL + +HRDL N+ L ++ DFGL+K L+AD+ A +
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 167 VVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYE 199
P + PE + + KSD+WS G M+E
Sbjct: 189 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 113 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 171
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 225
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 226 F-FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 151 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 210
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 211 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 246
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 136 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 194
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 248
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 249 F-FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 286
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 42/182 (23%)
Query: 120 AVDYLHSNYVLHRDLKCSNIFLTKDQD---VRLGDFGLAKTLKADDLASSV--------V 168
A+D+LH+ + HRDLK NI V++ DFGL +K + S +
Sbjct: 123 ALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC 182
Query: 169 GTPNYMCPELLADIP-----YGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSS 223
G+ YM PE++ Y + D+WSLG +Y + + P F G +R
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG--RCGSDCGWDRGE 240
Query: 224 IGPLPSC----------------------YSPSLKTLIKGMLRKNPEHRPSASELLKHPF 261
P+C S + K LI +L ++ + R SA+++L+HP+
Sbjct: 241 --ACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298
Query: 262 LQ 263
+Q
Sbjct: 299 VQ 300
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 114 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 172
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 226
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 227 F-FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 114 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 172
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 226
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 227 F-FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 113 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 171
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 225
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 226 F-FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 127 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 186
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 187 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 222
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 82 CIVTGYCEGGDMAELMKKSNGAY-FPEEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIF 140
++ +C G + ++++ + AY PE + ++ +++L N ++HR++K NI
Sbjct: 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
Query: 141 LTKDQD----VRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADI--------PYGFKS 188
+D +L DFG A+ L+ D+ + GT Y+ P++ YG
Sbjct: 145 RVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATV 204
Query: 189 DIWSLGCCMYEMAAHRPAFKAFD 211
D+WS+G Y A F+ F+
Sbjct: 205 DLWSIGVTFYHAATGSLPFRPFE 227
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 123 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 182
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 183 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 218
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 114 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 172
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 226
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 227 F-FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 219
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 219
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 219
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 40/198 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ ++L A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D Y + D+WSLGC + M + F K L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
I++ +I P SP + +LR + + R +A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 254 SELLKHPFLQHFV-DQYR 270
E ++HP+ V DQ R
Sbjct: 316 REAMEHPYFYTVVKDQAR 333
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 142 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 201
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 202 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 237
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQ---EMALIARVQ 63
Q+ + +G+G FG+ + E +V +++ + + E A +
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 64 HPYIVEFKEAWVE---KGCYVC--IVTGYCEGGDMAELMKKS----NGAYFPEEKLCKWF 114
HP++ + + KG ++ + + GD+ + S N P + L ++
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 115 AQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP--- 171
+ ++YL S +HRDL N L +D V + DFGL++ + + D +
Sbjct: 144 VDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPV 203
Query: 172 NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
++ E LAD Y SD+W+ G M+E+
Sbjct: 204 KWLALESLADNLYTVHSDVWAFGVTMWEI 232
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 215
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 40/198 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ ++L A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 135 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D Y + D+WSLGC + M + F K L
Sbjct: 195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 254
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
I++ +I P SP + +LR + + R +A
Sbjct: 255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 314
Query: 254 SELLKHPFLQHFV-DQYR 270
E ++HP+ V DQ R
Sbjct: 315 REAMEHPYFYTVVKDQAR 332
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 40/198 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ ++L A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D Y + D+WSLGC + M + F K L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
I++ +I P SP + +LR + + R +A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 254 SELLKHPFLQHFV-DQYR 270
E ++HP+ V DQ R
Sbjct: 316 REAMEHPYFYTVVKDQAR 333
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 40/198 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ ++L A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D Y + D+WSLGC + M + F K L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
I++ +I P SP + +LR + + R +A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 254 SELLKHPFLQHFV-DQYR 270
E ++HP+ V DQ R
Sbjct: 316 REAMEHPYFYTVVKDQAR 333
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 40/198 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ ++L A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D Y + D+WSLGC + M + F K L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
I++ +I P SP + +LR + + R +A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 254 SELLKHPFLQHFV-DQYR 270
E ++HP+ V DQ R
Sbjct: 316 REAMEHPYFYTVVKDQAR 333
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 40/198 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ ++L A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D Y + D+WSLGC + M + F K L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
I++ +I P SP + +LR + + R +A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 254 SELLKHPFLQHFV-DQYR 270
E ++HP+ V DQ R
Sbjct: 316 REAMEHPYFYTVVKDQAR 333
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 109 KLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL---AS 165
K+ + ++ + YL++N +HRDL N + +D V++GDFG+ + + D
Sbjct: 161 KMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 220
Query: 166 SVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMA--AHRPAFKAFDMAGLISKINRSS 223
+ +M PE L D + SD+WS G ++E+A A +P ++ ++ +
Sbjct: 221 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-YQGLSNEQVLRFVMEGG 279
Query: 224 IGPLPSCYSPSLKTLIKGMLRKNPEHRPSASELL 257
+ P L L++ + NP+ RPS E++
Sbjct: 280 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 40/198 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ ++L A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D Y + D+WSLGC + M + F K L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
I++ +I P SP + +LR + + R +A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 254 SELLKHPFLQHFV-DQYR 270
E ++HP+ V DQ R
Sbjct: 316 REAMEHPYFYTVVKDQAR 333
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 40/198 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ ++L A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 141 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 200
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D Y + D+WSLGC + M + F K L
Sbjct: 201 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 260
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
I++ +I P SP + +LR + + R +A
Sbjct: 261 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 320
Query: 254 SELLKHPFLQHFV-DQYR 270
E ++HP+ V DQ R
Sbjct: 321 REAMEHPYFYTVVKDQAR 338
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 40/198 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ ++L A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D Y + D+WSLGC + M + F K L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
I++ +I P SP + +LR + + R +A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 254 SELLKHPFLQHFV-DQYR 270
E ++HP+ V DQ R
Sbjct: 316 REAMEHPYFYTVVKDQAR 333
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 40/198 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ ++L A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D Y + D+WSLGC + M + F K L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
I++ +I P SP + +LR + + R +A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 254 SELLKHPFLQHFV-DQYR 270
E ++HP+ V DQ R
Sbjct: 316 REAMEHPYFYTVVKDQAR 333
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 21/260 (8%)
Query: 12 EQIGRGAFGAAI---LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR-VQHPYI 67
E IGRG FG L+++ +K +K L R T+ S +I + HP +
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK-LCKWFAQLLLAVDYLHS 126
+ + +V Y + GD+ ++ N + P K L + Q+ + YL S
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP-----NYMCPELLAD 181
+HRDL N L + V++ DFGLA+ + + S T +M E L
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 182 IPYGFKSDIWSLGCCMYEMAAH----RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+ KSD+WS G ++E+ P FD+ + + R + P C P +
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQP-EYCPDPLYEV 268
Query: 238 LIKGMLRKNPEHRPSASELL 257
++K E RPS SEL+
Sbjct: 269 MLK-CWHPKAEMRPSFSELV 287
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 10 IMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
++++G G FG +V + + +Y + I++ ++ +E ++ + H +V+
Sbjct: 28 FLKELGTGQFG---VVKYGKWRGQYDVA-IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
K + I+T Y G + +++ F ++L + + A++YL S
Sbjct: 84 LYGV-CTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQF 141
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYGF 186
LHRDL N + V++ DFGL++ + D+ SS VG+ + PE+L +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSS 200
Query: 187 KSDIWSLGCCMYEMAA 202
KSDIW+ G M+E+ +
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 25/140 (17%)
Query: 83 IVTGYCEGGDMAELMKKSNGAYFPEE----------------KLCKWFAQLLLAVDYLHS 126
++T YC GD+ +++ ++ + L + Q+ + +L S
Sbjct: 120 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS 179
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN------YMCPELLA 180
+HRDL NI LT + ++ DFGLA+ +K D S+ V N +M PE +
Sbjct: 180 KNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKGNARLPVKWMAPESIF 236
Query: 181 DIPYGFKSDIWSLGCCMYEM 200
+ Y F+SD+WS G ++E+
Sbjct: 237 NCVYTFESDVWSYGIFLWEL 256
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 107 EEKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQ-DVRLGDFGLAKTLKADDLAS 165
EE +F Q+L AV + H+ VLHRD+K NI + ++ +++L DFG LK D + +
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYT 187
Query: 166 SVVGTPNYMCPELLADIPY-GFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSI 224
GT Y PE + Y G + +WSLG +Y+M F+ + +I R +
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQV 241
Query: 225 GPLPSCYSPSLKTLIKGMLRKNPEHRPSASELLKHPFLQ 263
S + LI+ L P RP+ E+ HP++Q
Sbjct: 242 F-FRQRVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQ 279
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 123 YLHSN---YVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD--LASSVVGTPNYMCPE 177
YLH + ++HRD+K +NI L ++ + +GDFGLAK + D + +V GT ++ PE
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPE 213
Query: 178 LLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGL 215
L+ K+D++ G + E+ + +AFD+A L
Sbjct: 214 YLSTGKSSEKTDVFGYGVMLLELITGQ---RAFDLARL 248
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 21/260 (8%)
Query: 12 EQIGRGAFGAAI---LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR-VQHPYI 67
E IGRG FG L+++ +K +K L R T+ S +I + HP +
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK-LCKWFAQLLLAVDYLHS 126
+ + +V Y + GD+ ++ N + P K L + Q+ + YL S
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS 169
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP-----NYMCPELLAD 181
+HRDL N L + V++ DFGLA+ + + S T +M E L
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 182 IPYGFKSDIWSLGCCMYEMAAH----RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+ KSD+WS G ++E+ P FD+ + + R + P C P +
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQP-EYCPDPLYEV 287
Query: 238 LIKGMLRKNPEHRPSASELL 257
++K E RPS SEL+
Sbjct: 288 MLK-CWHPKAEMRPSFSELV 306
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 10 IMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
++++G G FG +V + + +Y + I++ ++ +E ++ + H +V+
Sbjct: 28 FLKELGTGQFG---VVKYGKWRGQYDVA-IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
K + I+T Y G + +++ F ++L + + A++YL S
Sbjct: 84 LYGV-CTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQF 141
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYGF 186
LHRDL N + V++ DFGL++ + DD +S VG+ + PE+L +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEETSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 187 KSDIWSLGCCMYEMAA 202
KSDIW+ G M+E+ +
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 111 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 170
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 171 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 206
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 108 EKLCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSV 167
+ L W Q+ ++YL ++HRDL N+ + Q V++ DFGLAK L A++
Sbjct: 114 QYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 173
Query: 168 VGTP---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
G +M E + Y +SD+WS G ++E+
Sbjct: 174 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 209
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 21/260 (8%)
Query: 12 EQIGRGAFGAAI---LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR-VQHPYI 67
E IGRG FG L+++ +K +K L R T+ S +I + HP +
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK-LCKWFAQLLLAVDYLHS 126
+ + +V Y + GD+ ++ N + P K L + Q+ + YL S
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP-----NYMCPELLAD 181
+HRDL N L + V++ DFGLA+ + + S T +M E L
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 182 IPYGFKSDIWSLGCCMYEMAAH----RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+ KSD+WS G ++E+ P FD+ + + R + P C P +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQP-EYCPDPLYEV 269
Query: 238 LIKGMLRKNPEHRPSASELL 257
++K E RPS SEL+
Sbjct: 270 MLK-CWHPKAEMRPSFSELV 288
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 122/323 (37%), Gaps = 70/323 (21%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP- 65
+Y ++ ++G G F L +K + R + +A E+ L+ RV
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMK---IVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 66 ----------YIVEFKEAWVEKG---CYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK 112
+I++ + + KG +V +V G ++ L+KK P + +
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQ 135
Query: 113 WFAQLLLAVDYLHSN-YVLHRDLKCSNIFL----TKDQDVRLGDFGLAKTLKADDLASSV 167
QLLL +DY+H ++H D+K N+ + + + +++ L D+ ++
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNS 195
Query: 168 VGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFK------------------- 208
+ T Y PE+L P+G +DIWS C ++E+ F+
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 209 ------------------AFDMAGLISKINRSSIGPLPSCYSPSLKT----------LIK 240
F+ GL+ I++ PL + K +
Sbjct: 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLS 315
Query: 241 GMLRKNPEHRPSASELLKHPFLQ 263
ML+ +P R A L+ HP+L+
Sbjct: 316 PMLQLDPRKRADAGGLVNHPWLK 338
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 21/260 (8%)
Query: 12 EQIGRGAFGAAI---LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR-VQHPYI 67
E IGRG FG L+++ +K +K L R T+ S +I + HP +
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK-LCKWFAQLLLAVDYLHS 126
+ + +V Y + GD+ ++ N + P K L + Q+ + YL S
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS 170
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP-----NYMCPELLAD 181
+HRDL N L + V++ DFGLA+ + + S T +M E L
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 182 IPYGFKSDIWSLGCCMYEMAAH----RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+ KSD+WS G ++E+ P FD+ + + R + P C P +
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQP-EYCPDPLYEV 288
Query: 238 LIKGMLRKNPEHRPSASELL 257
++K E RPS SEL+
Sbjct: 289 MLK-CWHPKAEMRPSFSELV 307
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 25/140 (17%)
Query: 83 IVTGYCEGGDMAELMKKSNGAYFPEE----------------KLCKWFAQLLLAVDYLHS 126
++T YC GD+ +++ ++ + L + Q+ + +L S
Sbjct: 122 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS 181
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN------YMCPELLA 180
+HRDL NI LT + ++ DFGLA+ +K D S+ V N +M PE +
Sbjct: 182 KNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKGNARLPVKWMAPESIF 238
Query: 181 DIPYGFKSDIWSLGCCMYEM 200
+ Y F+SD+WS G ++E+
Sbjct: 239 NCVYTFESDVWSYGIFLWEL 258
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 122/325 (37%), Gaps = 74/325 (22%)
Query: 7 QYEIMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHP- 65
+Y ++ ++G G F L +K + R + +A E+ L+ RV
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMK---IVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 66 ----------YIVEFKEAWVEKG---CYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCK 112
+I++ + + KG +V +V G ++ L+KK P + +
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQ 135
Query: 113 WFAQLLLAVDYLHSN-YVLHRDLKCSNIFLTKDQ------DVRLGDFGLAKTLKADDLAS 165
QLLL +DY+H ++H D+K N+ + +++ D G A D+ +
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDEHYT 193
Query: 166 SVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFK----------------- 208
+ + T Y PE+L P+G +DIWS C ++E+ F+
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 209 --------------------AFDMAGLISKINRSSIGPLPSCYSPSLKT----------L 238
F+ GL+ I++ PL + K
Sbjct: 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDF 313
Query: 239 IKGMLRKNPEHRPSASELLKHPFLQ 263
+ ML+ +P R A L+ HP+L+
Sbjct: 314 LSPMLQLDPRKRADAGGLVNHPWLK 338
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 25/140 (17%)
Query: 83 IVTGYCEGGDMAELMKKSNGAYFPEE----------------KLCKWFAQLLLAVDYLHS 126
++T YC GD+ +++ ++ + L + Q+ + +L S
Sbjct: 127 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS 186
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN------YMCPELLA 180
+HRDL NI LT + ++ DFGLA+ +K D S+ V N +M PE +
Sbjct: 187 KNCIHRDLAARNILLTHGRITKICDFGLARHIKND---SNYVVKGNARLPVKWMAPESIF 243
Query: 181 DIPYGFKSDIWSLGCCMYEM 200
+ Y F+SD+WS G ++E+
Sbjct: 244 NCVYTFESDVWSYGIFLWEL 263
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 10 IMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
++++G G FG +V + + +Y + I++ ++ +E ++ + H +V+
Sbjct: 8 FLKELGTGQFG---VVKYGKWRGQYDVA-IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
K + I+T Y G + +++ F ++L + + A++YL S
Sbjct: 64 LYGV-CTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQF 121
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYGF 186
LHRDL N + V++ DFGL++ + D+ SS VG+ + PE+L +
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSS 180
Query: 187 KSDIWSLGCCMYEMAA 202
KSDIW+ G M+E+ +
Sbjct: 181 KSDIWAFGVLMWEIYS 196
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 30/217 (13%)
Query: 14 IGRGAFGAAILVN--HRAEKKKYVLKKIRLARQTERCR--RSAHQEMALIARVQHPYIVE 69
+G G FG + H + Y +++ ++ R E ++ +V HP++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNG---AYF-------------PEEK---- 109
A + G + IV Y + G + +++S Y P+E+
Sbjct: 91 LYGACSQDGPLLLIVE-YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 110 --LCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD--LAS 165
L + Q+ + YL ++HRDL NI + + + +++ DFGL++ + +D +
Sbjct: 150 GDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKR 209
Query: 166 SVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEMA 201
S P +M E L D Y +SD+WS G ++E+
Sbjct: 210 SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 25/140 (17%)
Query: 83 IVTGYCEGGDMAELMKKSNGAYFPEE----------------KLCKWFAQLLLAVDYLHS 126
++T YC GD+ +++ ++ + L + Q+ + +L S
Sbjct: 104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS 163
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN------YMCPELLA 180
+HRDL NI LT + ++ DFGLA+ +K D S+ V N +M PE +
Sbjct: 164 KNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKGNARLPVKWMAPESIF 220
Query: 181 DIPYGFKSDIWSLGCCMYEM 200
+ Y F+SD+WS G ++E+
Sbjct: 221 NCVYTFESDVWSYGIFLWEL 240
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 25/140 (17%)
Query: 83 IVTGYCEGGDMAELMKKSNGAYFPEE----------------KLCKWFAQLLLAVDYLHS 126
++T YC GD+ +++ ++ + L + Q+ + +L S
Sbjct: 127 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS 186
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPN------YMCPELLA 180
+HRDL NI LT + ++ DFGLA+ +K D S+ V N +M PE +
Sbjct: 187 KNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKGNARLPVKWMAPESIF 243
Query: 181 DIPYGFKSDIWSLGCCMYEM 200
+ Y F+SD+WS G ++E+
Sbjct: 244 NCVYTFESDVWSYGIFLWEL 263
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 30/217 (13%)
Query: 14 IGRGAFGAAILVN--HRAEKKKYVLKKIRLARQTERCR--RSAHQEMALIARVQHPYIVE 69
+G G FG + H + Y +++ ++ R E ++ +V HP++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNG---AYF-------------PEEK---- 109
A + G + IV Y + G + +++S Y P+E+
Sbjct: 91 LYGACSQDGPLLLIVE-YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 110 --LCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD--LAS 165
L + Q+ + YL ++HRDL NI + + + +++ DFGL++ + +D +
Sbjct: 150 GDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKR 209
Query: 166 SVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEMA 201
S P +M E L D Y +SD+WS G ++E+
Sbjct: 210 SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 110/260 (42%), Gaps = 21/260 (8%)
Query: 12 EQIGRGAFGAAI---LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR-VQHPYI 67
E IGRG FG L+++ +K +K L R T+ S +I + HP +
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK-LCKWFAQLLLAVDYLHS 126
+ + +V Y + GD+ ++ N + P K L + Q+ + +L S
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLAS 210
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTL--KADDLASSVVGTP---NYMCPELLAD 181
+HRDL N L + V++ DFGLA+ + K D + G +M E L
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 182 IPYGFKSDIWSLGCCMYEMAAH----RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+ KSD+WS G ++E+ P FD+ + + R + P C P +
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQP-EYCPDPLYEV 328
Query: 238 LIKGMLRKNPEHRPSASELL 257
++K E RPS SEL+
Sbjct: 329 MLK-CWHPKAEMRPSFSELV 347
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ ++L A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 134 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 193
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF 207
+ PELL D Y + D+WSLGC + M + F
Sbjct: 194 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 230
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 10 IMEQIGRGAFGAAILVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIARVQHPYIVE 69
++++G G FG +V + + +Y + I++ ++ +E ++ + H +V+
Sbjct: 12 FLKELGTGQFG---VVKYGKWRGQYDVA-IKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEKLCKWFAQLLLAVDYLHSNYV 129
K + I+T Y G + +++ F ++L + + A++YL S
Sbjct: 68 LYGV-CTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQF 125
Query: 130 LHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP---NYMCPELLADIPYGF 186
LHRDL N + V++ DFGL++ + D+ SS VG+ + PE+L +
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSS 184
Query: 187 KSDIWSLGCCMYEMAA 202
KSDIW+ G M+E+ +
Sbjct: 185 KSDIWAFGVLMWEIYS 200
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ ++L A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF 207
+ PELL D Y + D+WSLGC + M + F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ ++L A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 135 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF 207
+ PELL D Y + D+WSLGC + M + F
Sbjct: 195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ ++L A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF 207
+ PELL D Y + D+WSLGC + M + F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 30/217 (13%)
Query: 14 IGRGAFGAAILVN--HRAEKKKYVLKKIRLARQTERCR--RSAHQEMALIARVQHPYIVE 69
+G G FG + H + Y +++ ++ R E ++ +V HP++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 70 FKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNG---AYF-------------PEEK---- 109
A + G + IV Y + G + +++S Y P+E+
Sbjct: 91 LYGACSQDGPLLLIVE-YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 110 --LCKWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADD--LAS 165
L + Q+ + YL ++HRDL NI + + + +++ DFGL++ + +D +
Sbjct: 150 GDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR 209
Query: 166 SVVGTP-NYMCPELLADIPYGFKSDIWSLGCCMYEMA 201
S P +M E L D Y +SD+WS G ++E+
Sbjct: 210 SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 7 QYEIMEQIGRGAFGAAI--LVNHRAEKKKY--VLKKIRLARQTERCRRSAHQEMALIARV 62
+++ ++ +G GAFG L EK K +K++R A + + + E ++A V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASV 76
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGA----YFPEEK-------LC 111
+P+ VC + G C + +M+ Y E K L
Sbjct: 77 DNPH--------------VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP 171
W Q+ ++YL ++HRDL N+ + Q V++ DFG AK L A++ G
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 172 ---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
+M E + Y +SD+WS G ++E+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 21/260 (8%)
Query: 12 EQIGRGAFGAAI---LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR-VQHPYI 67
E IGRG FG L+++ +K +K L R T+ S +I + HP +
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK-LCKWFAQLLLAVDYLHS 126
+ + +V Y + GD+ ++ N + P K L + Q+ + YL S
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP-----NYMCPELLAD 181
+HRDL N L + V++ DFGLA+ + + S T +M E L
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 182 IPYGFKSDIWSLGCCMYEMAAH----RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+ KSD+WS G ++E+ P FD+ + + R + P C P +
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQP-EYCPDPLYEV 268
Query: 238 LIKGMLRKNPEHRPSASELL 257
++K E RPS SEL+
Sbjct: 269 MLK-CWHPKAEMRPSFSELV 287
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 111/260 (42%), Gaps = 21/260 (8%)
Query: 12 EQIGRGAFGAAI---LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR-VQHPYI 67
E IGRG FG L+++ +K +K L R T+ S +I + HP +
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK-LCKWFAQLLLAVDYLHS 126
+ + +V Y + GD+ ++ N + P K L + Q+ + +L S
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTL--KADDLASSVVGTP---NYMCPELLAD 181
+HRDL N L + V++ DFGLA+ + K D + G +M E L
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 182 IPYGFKSDIWSLGCCMYEMAAH----RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+ KSD+WS G ++E+ P FD+ + + R + P C P +
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQP-EYCPDPLYEV 270
Query: 238 LIKGMLRKNPEHRPSASELL 257
++K K E RPS SEL+
Sbjct: 271 MLKCWHPK-AEMRPSFSELV 289
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 7 QYEIMEQIGRGAFGAAI--LVNHRAEKKKY--VLKKIRLARQTERCRRSAHQEMALIARV 62
+++ ++ +G GAFG L EK K +K++R A + + + E ++A V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASV 76
Query: 63 QHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGA----YFPEEK-------LC 111
+P+ VC + G C + +M+ Y E K L
Sbjct: 77 DNPH--------------VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 112 KWFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP 171
W Q+ ++YL ++HRDL N+ + Q V++ DFG AK L A++ G
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 172 ---NYMCPELLADIPYGFKSDIWSLGCCMYEM 200
+M E + Y +SD+WS G ++E+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWEL 214
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 21/260 (8%)
Query: 12 EQIGRGAFGAAI---LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR-VQHPYI 67
E IGRG FG L+++ +K +K L R T+ S +I + HP +
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK-LCKWFAQLLLAVDYLHS 126
+ + +V Y + GD+ ++ N + P K L + Q+ + YL S
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS 148
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP-----NYMCPELLAD 181
+HRDL N L + V++ DFGLA+ + + S T +M E L
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 182 IPYGFKSDIWSLGCCMYEMAAH----RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+ KSD+WS G ++E+ P FD+ + + R + P C P +
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQP-EYCPDPLYEV 266
Query: 238 LIKGMLRKNPEHRPSASELL 257
++K E RPS SEL+
Sbjct: 267 MLK-CWHPKAEMRPSFSELV 285
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 110/260 (42%), Gaps = 21/260 (8%)
Query: 12 EQIGRGAFGAAI---LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR-VQHPYI 67
E IGRG FG L+++ +K +K L R T+ S +I + HP +
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK-LCKWFAQLLLAVDYLHS 126
+ + +V Y + GD+ ++ N + P K L + Q+ + +L S
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTL--KADDLASSVVGTP---NYMCPELLAD 181
+HRDL N L + V++ DFGLA+ + K D + G +M E L
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 182 IPYGFKSDIWSLGCCMYEMAAH----RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+ KSD+WS G ++E+ P FD+ + + R + P C P +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQP-EYCPDPLYEV 269
Query: 238 LIKGMLRKNPEHRPSASELL 257
++K E RPS SEL+
Sbjct: 270 MLK-CWHPKAEMRPSFSELV 288
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 21/260 (8%)
Query: 12 EQIGRGAFGAAI---LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR-VQHPYI 67
E IGRG FG L+++ +K +K L R T+ S +I + HP +
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK-LCKWFAQLLLAVDYLHS 126
+ + +V Y + GD+ ++ N + P K L + Q+ + YL S
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP-----NYMCPELLAD 181
+HRDL N L + V++ DFGLA+ + + S T +M E L
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 182 IPYGFKSDIWSLGCCMYEMAAH----RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+ KSD+WS G ++E+ P FD+ + + R + P C P +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQP-EYCPDPLYEV 269
Query: 238 LIKGMLRKNPEHRPSASELL 257
++K E RPS SEL+
Sbjct: 270 MLK-CWHPKAEMRPSFSELV 288
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 21/260 (8%)
Query: 12 EQIGRGAFGAAI---LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR-VQHPYI 67
E IGRG FG L+++ +K +K L R T+ S +I + HP +
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK-LCKWFAQLLLAVDYLHS 126
+ + +V Y + GD+ ++ N + P K L + Q+ + YL S
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS 149
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTP-----NYMCPELLAD 181
+HRDL N L + V++ DFGLA+ + + S T +M E L
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 182 IPYGFKSDIWSLGCCMYEMAAH----RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+ KSD+WS G ++E+ P FD+ + + R + P C P +
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQP-EYCPDPLYEV 267
Query: 238 LIKGMLRKNPEHRPSASELL 257
++K E RPS SEL+
Sbjct: 268 MLK-CWHPKAEMRPSFSELV 286
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 40/199 (20%)
Query: 113 WFAQLLLAVDYLHSNYVLHRDLKCSNIFLTKD-QDVRLGDFGLAKTLKADDLASSVVGTP 171
+ ++L A+DY HS ++HRD+K N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 172 NYMCPELLADIP-YGFKSDIWSLGCCMYEMAAHRPAF--------------KAFDMAGLI 216
+ PELL D Y + D+WSLGC + M + F K L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 217 SKINRSSIGPLPS-----------------------CYSPSLKTLIKGMLRKNPEHRPSA 253
I++ +I P SP + +LR + + R +A
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 254 SELLKHPFLQHFV-DQYRP 271
E ++HP+ V +Q +P
Sbjct: 316 REAMEHPYFYPVVKEQSQP 334
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 111/260 (42%), Gaps = 21/260 (8%)
Query: 12 EQIGRGAFGAAI---LVNHRAEKKKYVLKKIRLARQTERCRRSAHQEMALIAR-VQHPYI 67
E IGRG FG L+++ +K +K L R T+ S +I + HP +
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 68 VEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGAYFPEEK-LCKWFAQLLLAVDYLHS 126
+ + +V Y + GD+ ++ N + P K L + Q+ + +L S
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLAS 149
Query: 127 NYVLHRDLKCSNIFLTKDQDVRLGDFGLAKTL--KADDLASSVVGTP---NYMCPELLAD 181
+HRDL N L + V++ DFGLA+ + K D + G +M E L
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 182 IPYGFKSDIWSLGCCMYEMAAH----RPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKT 237
+ KSD+WS G ++E+ P FD+ + + R + P C P +
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-GRRLLQP-EYCPDPLYEV 267
Query: 238 LIKGMLRKNPEHRPSASELL 257
++K K E RPS SEL+
Sbjct: 268 MLKCWHPK-AEMRPSFSELV 286
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.130 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,306,434
Number of Sequences: 62578
Number of extensions: 1194476
Number of successful extensions: 4840
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 1639
Number of HSP's gapped (non-prelim): 1284
length of query: 1092
length of database: 14,973,337
effective HSP length: 109
effective length of query: 983
effective length of database: 8,152,335
effective search space: 8013745305
effective search space used: 8013745305
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)