Query 043251
Match_columns 342
No_of_seqs 219 out of 1287
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 03:00:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043251.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043251hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02254 gibberellin 3-beta-di 100.0 4.4E-82 9.5E-87 605.1 31.2 335 5-341 3-353 (358)
2 PLN02216 protein SRG1 100.0 8.6E-77 1.9E-81 569.2 30.1 304 28-334 25-346 (357)
3 PLN02758 oxidoreductase, 2OG-F 100.0 1.8E-76 3.9E-81 567.8 29.3 310 23-335 19-349 (361)
4 PLN02947 oxidoreductase 100.0 3.4E-76 7.4E-81 567.1 28.4 311 21-334 28-360 (374)
5 PLN02904 oxidoreductase 100.0 8.3E-76 1.8E-80 562.0 29.2 311 21-334 16-343 (357)
6 PLN02515 naringenin,2-oxogluta 100.0 1.7E-75 3.6E-80 559.7 30.0 309 25-335 8-332 (358)
7 PLN02276 gibberellin 20-oxidas 100.0 4.5E-75 9.8E-80 558.4 30.2 302 30-334 18-341 (361)
8 PLN02639 oxidoreductase, 2OG-F 100.0 1.5E-74 3.3E-79 550.6 29.7 302 29-334 12-326 (337)
9 PLN02750 oxidoreductase, 2OG-F 100.0 1.8E-74 4E-79 551.7 30.2 305 30-337 2-333 (345)
10 PLN02704 flavonol synthase 100.0 1.8E-74 3.9E-79 549.7 29.6 301 29-332 16-332 (335)
11 PLN02912 oxidoreductase, 2OG-F 100.0 1.8E-74 4E-79 551.4 29.5 304 27-334 13-334 (348)
12 PLN03178 leucoanthocyanidin di 100.0 1.6E-74 3.5E-79 554.8 28.1 308 24-334 11-347 (360)
13 PLN02393 leucoanthocyanidin di 100.0 2.6E-74 5.7E-79 553.4 29.1 308 22-333 16-348 (362)
14 PLN03002 oxidoreductase, 2OG-F 100.0 3.4E-72 7.4E-77 533.2 29.9 286 48-335 12-323 (332)
15 PLN00417 oxidoreductase, 2OG-F 100.0 3.7E-72 8.1E-77 535.4 30.3 294 30-326 17-331 (348)
16 PLN02997 flavonol synthase 100.0 6.2E-72 1.3E-76 529.0 30.6 279 47-332 29-316 (325)
17 PTZ00273 oxidase reductase; Pr 100.0 5.4E-72 1.2E-76 530.5 29.8 286 48-335 3-314 (320)
18 PLN02485 oxidoreductase 100.0 9.3E-72 2E-76 530.6 29.2 285 48-333 5-326 (329)
19 PLN02156 gibberellin 2-beta-di 100.0 2.6E-71 5.7E-76 526.0 30.2 281 49-334 25-316 (335)
20 KOG0143 Iron/ascorbate family 100.0 7.9E-71 1.7E-75 519.7 29.1 285 48-335 15-313 (322)
21 PLN02299 1-aminocyclopropane-1 100.0 2.5E-70 5.5E-75 517.5 28.0 277 48-333 4-295 (321)
22 COG3491 PcbC Isopenicillin N s 100.0 2.9E-70 6.3E-75 495.4 26.0 270 48-319 3-296 (322)
23 PLN02365 2-oxoglutarate-depend 100.0 1.4E-69 3.1E-74 508.8 27.8 276 49-336 4-289 (300)
24 PLN02984 oxidoreductase, 2OG-F 100.0 3.1E-67 6.7E-72 499.2 30.1 276 48-334 36-326 (341)
25 PLN02403 aminocyclopropanecarb 100.0 1.1E-66 2.4E-71 488.3 27.5 268 50-331 2-281 (303)
26 PLN03001 oxidoreductase, 2OG-F 100.0 3.2E-60 7E-65 436.0 22.9 242 91-335 2-252 (262)
27 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.9 4.2E-25 9.2E-30 173.7 7.4 95 201-299 2-98 (98)
28 PF14226 DIOX_N: non-haem diox 99.9 7.1E-24 1.5E-28 171.8 8.1 103 51-154 1-116 (116)
29 PLN03176 flavanone-3-hydroxyla 99.8 7.1E-20 1.5E-24 148.9 9.4 92 30-121 13-116 (120)
30 PF13640 2OG-FeII_Oxy_3: 2OG-F 96.4 0.0016 3.6E-08 50.6 2.0 79 203-298 1-100 (100)
31 smart00702 P4Hc Prolyl 4-hydro 95.1 0.28 6.1E-06 42.2 10.6 105 172-298 60-178 (178)
32 PRK05467 Fe(II)-dependent oxyg 94.4 0.36 7.7E-06 43.6 9.6 49 237-298 129-177 (226)
33 PF12851 Tet_JBP: Oxygenase do 92.6 0.45 9.9E-06 41.1 7.0 68 218-298 85-170 (171)
34 PRK08130 putative aldolase; Va 83.1 1.5 3.2E-05 39.2 3.9 34 49-82 126-162 (213)
35 PRK15401 alpha-ketoglutarate-d 75.4 16 0.00036 32.6 8.0 78 203-295 118-210 (213)
36 PF13759 2OG-FeII_Oxy_5: Putat 72.0 5.6 0.00012 30.8 3.8 37 247-295 63-100 (101)
37 TIGR02466 conserved hypothetic 68.3 8.5 0.00018 34.1 4.5 38 248-297 160-198 (201)
38 PF13532 2OG-FeII_Oxy_2: 2OG-F 63.9 9.2 0.0002 33.0 3.9 84 202-295 98-193 (194)
39 PF07350 DUF1479: Protein of u 60.8 13 0.00028 36.7 4.5 52 47-99 46-100 (416)
40 PF01113 DapB_N: Dihydrodipico 53.7 18 0.0004 29.1 3.7 45 52-96 70-115 (124)
41 PRK08333 L-fuculose phosphate 52.6 17 0.00037 31.4 3.6 34 49-82 119-155 (184)
42 COG0289 DapB Dihydrodipicolina 50.9 34 0.00074 31.6 5.3 45 52-96 72-117 (266)
43 PF06820 Phage_fiber_C: Putati 50.3 16 0.00035 25.4 2.3 36 218-253 16-61 (64)
44 PRK05874 L-fuculose-phosphate 47.0 23 0.00049 31.7 3.5 33 50-82 127-162 (217)
45 PRK06661 hypothetical protein; 40.3 19 0.00041 32.6 2.0 69 8-82 80-160 (231)
46 PRK08193 araD L-ribulose-5-pho 40.1 19 0.00042 32.5 2.0 71 8-82 80-172 (231)
47 TIGR02624 rhamnu_1P_ald rhamnu 39.4 30 0.00066 32.1 3.2 34 49-82 176-212 (270)
48 COG2140 Thermophilic glucose-6 38.9 72 0.0016 28.4 5.3 68 200-272 89-158 (209)
49 TIGR02409 carnitine_bodg gamma 38.6 56 0.0012 31.6 5.1 48 48-98 107-158 (366)
50 PRK06833 L-fuculose phosphate 37.2 34 0.00075 30.4 3.1 34 49-82 123-159 (214)
51 PF00596 Aldolase_II: Class II 36.7 21 0.00045 30.7 1.6 34 49-82 122-159 (184)
52 PRK08087 L-fuculose phosphate 35.6 45 0.00098 29.7 3.7 34 49-82 121-157 (215)
53 TIGR02130 dapB_plant dihydrodi 35.0 76 0.0017 29.6 5.1 39 52-90 72-111 (275)
54 PRK03634 rhamnulose-1-phosphat 33.9 43 0.00093 31.1 3.3 67 16-82 140-214 (274)
55 PRK08660 L-fuculose phosphate 33.5 57 0.0012 28.0 3.9 33 49-82 114-149 (181)
56 PF12791 RsgI_N: Anti-sigma fa 33.4 22 0.00047 24.3 1.0 30 242-274 10-39 (56)
57 PRK06754 mtnB methylthioribulo 31.3 49 0.0011 29.3 3.1 33 50-82 137-172 (208)
58 PRK06486 hypothetical protein; 31.1 43 0.00094 30.9 2.8 71 8-82 104-185 (262)
59 PRK06755 hypothetical protein; 31.1 46 0.001 29.6 2.9 33 50-82 136-171 (209)
60 TIGR00568 alkb DNA alkylation 30.4 2.9E+02 0.0064 23.6 7.7 59 202-266 96-162 (169)
61 PLN00052 prolyl 4-hydroxylase; 29.8 4.9E+02 0.011 24.7 10.0 47 250-300 206-253 (310)
62 TIGR01086 fucA L-fuculose phos 29.6 50 0.0011 29.3 2.9 71 8-82 77-156 (214)
63 PF03668 ATP_bind_2: P-loop AT 28.3 86 0.0019 29.4 4.3 31 64-96 16-46 (284)
64 PF11243 DUF3045: Protein of u 28.3 48 0.001 24.6 2.0 21 63-83 36-56 (89)
65 KOG2631 Class II aldolase/addu 27.5 1.7E+02 0.0037 26.1 5.7 61 45-105 151-221 (238)
66 PLN02775 Probable dihydrodipic 26.4 1.3E+02 0.0028 28.2 5.1 40 49-88 80-120 (286)
67 TIGR03328 salvage_mtnB methylt 26.0 76 0.0016 27.6 3.4 33 50-82 126-163 (193)
68 PRK06557 L-ribulose-5-phosphat 25.2 68 0.0015 28.6 3.0 71 8-82 86-167 (221)
69 PRK06357 hypothetical protein; 25.1 95 0.0021 27.7 3.9 33 50-82 130-171 (216)
70 PRK09553 tauD taurine dioxygen 24.7 1.3E+02 0.0028 27.7 4.9 49 49-100 14-65 (277)
71 cd00398 Aldolase_II Class II A 24.1 51 0.0011 29.1 1.9 34 49-82 121-159 (209)
72 PRK05834 hypothetical protein; 23.3 88 0.0019 27.4 3.2 33 50-82 121-160 (194)
73 COG4895 Uncharacterized conser 21.3 54 0.0012 22.6 1.1 23 6-28 32-54 (63)
74 PF03460 NIR_SIR_ferr: Nitrite 20.2 1.6E+02 0.0035 20.6 3.6 38 59-96 23-68 (69)
75 PF01471 PG_binding_1: Putativ 20.0 1.1E+02 0.0023 20.5 2.5 42 60-101 3-44 (57)
No 1
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=100.00 E-value=4.4e-82 Score=605.11 Aligned_cols=335 Identities=59% Similarity=1.032 Sum_probs=301.1
Q ss_pred cchhHhhhcCCCCCCcccccccCCCCCCCCCCcCCCCCC--CC------CCCCCCceeeCCChHHHHHHHHHHHhccEEE
Q 043251 5 TTLSEAYREHPLHPHHIIPIDFNSVCSLPESHKWPKFDD--LY------DNKISVPVIDLRDPRVAQLIGRACEKWGVFQ 76 (342)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~------~~~~~iPvIDls~~~~~~~l~~A~~~~GFF~ 76 (342)
.|++.+.+.+|.|-++|+.+..+.+.+||++|++|..++ +. ....+||||||++.+++++|.+||++|||||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~v~p~~~~~~~~~~~~~~~~~~~iPvIDl~~~~~~~~l~~Ac~~~GFF~ 82 (358)
T PLN02254 3 STLSDAFRSHPLHLNHIIPLDFTSLQTLPDSHVWTPKDDLLFSSAPSPSTTDESIPVIDLSDPNALTLIGHACETWGVFQ 82 (358)
T ss_pred cchhhhhccCCcccccccccchhhhccCChhhcCChhhccCccccccccCcCCCCCeEeCCCHHHHHHHHHHHHHCCEEE
Confidence 578889999999999998777777779999999999887 31 1235799999999889999999999999999
Q ss_pred EEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhccCCCCccccccccccCCCCCCcccccceeccCCccccccCCCCCCch
Q 043251 77 LIYHGIPLNVLKDAESEARRLFSLPSRQKLKALRAPAGATGYGIARITPFFDKYMWHEGFTIMGTSIHDHAKQLWPHNHA 156 (342)
Q Consensus 77 l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~wP~~~~ 156 (342)
|+||||+.++++++++++++||+||.|+|+++......++||+.........+.||+|.|.+.. .|.....|.||+.++
T Consensus 83 vvnHGI~~~l~~~~~~~~~~FF~LP~EeK~k~~~~~~~~~Gy~~~~~~~~~~~~~w~e~~~~~~-~p~~~~~~~wP~~~~ 161 (358)
T PLN02254 83 VTNHGIPLSLLDDIESQTRRLFSLPAQRKLKAARSPDGVSGYGVARISSFFNKKMWSEGFTIMG-SPLEHARQLWPQDHT 161 (358)
T ss_pred EEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCcccccccccccccCCCCceeeEEeec-CccccchhhCCCCch
Confidence 9999999999999999999999999999999986666788998766555556789999999865 454446789999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhhhhc-----cCCccceeccccCCCCCccCCccccCCCCCCceEE
Q 043251 157 KFCDVMETYQKKMNILADQLTQLIFKSLDISEEQAEEMNW-----VGSSSALQLNSYPSCPEPNRAVGLAPHTDTSLITI 231 (342)
Q Consensus 157 ~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~-----~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTl 231 (342)
+||+++++|+++|.+|+.+||++|+++||+++++|.. .+ .+..+.||++|||+|+.++..+|+++|||+|+|||
T Consensus 162 ~fr~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~-~~~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTi 240 (358)
T PLN02254 162 KFCDVMEEYQKEMKKLAERLMWLMLGSLGITEEDIKW-AGPKSGSQGAQAALQLNSYPVCPDPDRAMGLAPHTDSSLLTI 240 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HhhcccccCcceeEEEecCCCCCCcccccCcCCccCCCcEEE
Confidence 9999999999999999999999999999999888753 22 12367899999999999888999999999999999
Q ss_pred EeeCCCCceeEEecCCceEEecCCCCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC
Q 043251 232 LHENSIAGLQIFKQEVGWVSVKPVDGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS 311 (342)
Q Consensus 232 L~qd~~~GLqV~~~~g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~ 311 (342)
|+||+++||||++++|+|++|+|+||++||||||+||+||||+|||++|||+.+..++||||+||++|+.|++|+|++++
T Consensus 241 L~Qd~v~GLQV~~~~~~Wi~V~p~pgalVVNiGD~lq~~SNg~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~l 320 (358)
T PLN02254 241 LYQSNTSGLQVFREGVGWVTVPPVPGSLVVNVGDLLHILSNGRFPSVLHRAVVNKTRHRISVAYFYGPPSDVQISPLPKL 320 (358)
T ss_pred EecCCCCCceEECCCCEEEEcccCCCCEEEEhHHHHHHHhCCeeccccceeecCCCCCEEEEEEEecCCCCcEEeCcHHh
Confidence 99999999999988778999999999999999999999999999999999999888899999999999999999999988
Q ss_pred ---CCCCCcCCccHHHHHHHHHhChhhhhcccc
Q 043251 312 ---GQVARYRPVTVKEFISLKAKSPEKALSCIK 341 (342)
Q Consensus 312 ---~~p~~y~~~t~~e~~~~~~~~~~~~~~~~~ 341 (342)
++|++|++++++||+..+.+.+.+.++.+|
T Consensus 321 v~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~ 353 (358)
T PLN02254 321 VDPNHPPLYRSVTWKEYLATKAKHFNKALSLIR 353 (358)
T ss_pred cCCCCCcccCCcCHHHHHHHHHHhhhhhhhhhh
Confidence 578999999999999999988888777765
No 2
>PLN02216 protein SRG1
Probab=100.00 E-value=8.6e-77 Score=569.20 Aligned_cols=304 Identities=31% Similarity=0.530 Sum_probs=269.0
Q ss_pred CCCCCCCCCcCCCCCCCCC-----CCCCCceeeCCCh-------HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHH
Q 043251 28 SVCSLPESHKWPKFDDLYD-----NKISVPVIDLRDP-------RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEAR 95 (342)
Q Consensus 28 ~~~~~p~~~~~~~~~~~~~-----~~~~iPvIDls~~-------~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~ 95 (342)
++++||++|++|.++++.. ...+||||||+.. +++++|++||++||||||+||||+.+++++++++++
T Consensus 25 ~~~~~p~~~v~p~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~ 104 (357)
T PLN02216 25 MITTVPPRYVRSDQDKTEIAVDSGLSSEIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQ 104 (357)
T ss_pred CCCCCCHhhCcCcccCCccccccCcCCCCCeEEChhccCCccHHHHHHHHHHHHHHCcEEEEECCCCCHHHHHHHHHHHH
Confidence 6789999999999988731 1247999999732 478999999999999999999999999999999999
Q ss_pred HhcCCCHHHHhhhccCCCCccccccccccCCCCCCcccccceeccCCcc-ccccCCCCCCchhhHHHHHHHHHHHHHHHH
Q 043251 96 RLFSLPSRQKLKALRAPAGATGYGIARITPFFDKYMWHEGFTIMGTSIH-DHAKQLWPHNHAKFCDVMETYQKKMNILAD 174 (342)
Q Consensus 96 ~fF~lP~e~K~~~~~~~~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~-~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~ 174 (342)
+||+||.|+|+++...+..++||+........++.||+|.|.+.. .|. ...+|.||+.+++||+++++|+++|.+|+.
T Consensus 105 ~FF~LP~eeK~k~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~-~p~~~~~~~~WP~~p~~fr~~~~~y~~~~~~l~~ 183 (357)
T PLN02216 105 DFFNLPMEEKKKLWQRPGEIEGFGQAFVVSEDQKLDWADMFFLTM-QPVRLRKPHLFPKLPLPFRDTLETYSAEVKSIAK 183 (357)
T ss_pred HHHcCCHHHHHhhhcCCCCccccCccccccccccCCceeeeeeec-cCcccccchhcccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999976555678997654433345679999998865 343 356789999889999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhhhccCC-ccceeccccCCCCCccCCccccCCCCCCceEEEee-CCCCceeEEecCCceEEe
Q 043251 175 QLTQLIFKSLDISEEQAEEMNWVGS-SSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHE-NSIAGLQIFKQEVGWVSV 252 (342)
Q Consensus 175 ~ll~~l~~~Lgl~~~~~~~~~~~~~-~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~q-d~~~GLqV~~~~g~W~~V 252 (342)
+|+++|+++||+++++|.+ .+... .+.||++|||+|+.++..+|+++|||+|+||||+| ++++||||+. +|+|++|
T Consensus 184 ~ll~~la~~Lgl~~~~f~~-~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~GLQV~~-~g~Wi~V 261 (357)
T PLN02216 184 ILFAKMASALEIKPEEMEK-LFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVEGLQIKK-DGKWVSV 261 (357)
T ss_pred HHHHHHHHHcCCCHHHHHH-HhccCchheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCCceeEEE-CCEEEEC
Confidence 9999999999999988873 33333 57899999999999888999999999999999999 5799999985 5699999
Q ss_pred cCCCCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCCcCCccHHHHHHHH
Q 043251 253 KPVDGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVARYRPVTVKEFISLK 329 (342)
Q Consensus 253 ~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~y~~~t~~e~~~~~ 329 (342)
+|+||++||||||+||+||||+|||++|||+.++.++|||++||++|+.|++|+|++++ ++|++|+++|++||+..+
T Consensus 262 ~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~Y~~~t~~ey~~~~ 341 (357)
T PLN02216 262 KPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAALFKSLTTKEYFDGL 341 (357)
T ss_pred CCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCCCCCcCHHHHHHHH
Confidence 99999999999999999999999999999998888899999999999999999999998 678999999999999998
Q ss_pred HhChh
Q 043251 330 AKSPE 334 (342)
Q Consensus 330 ~~~~~ 334 (342)
.....
T Consensus 342 ~~~~~ 346 (357)
T PLN02216 342 FSREL 346 (357)
T ss_pred Hhccc
Confidence 87655
No 3
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.8e-76 Score=567.76 Aligned_cols=310 Identities=32% Similarity=0.554 Sum_probs=272.9
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCC------CCCCCceeeCCCh---------HHHHHHHHHHHhccEEEEEcCCCChHHH
Q 043251 23 PIDFNSVCSLPESHKWPKFDDLYD------NKISVPVIDLRDP---------RVAQLIGRACEKWGVFQLIYHGIPLNVL 87 (342)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~------~~~~iPvIDls~~---------~~~~~l~~A~~~~GFF~l~nhGi~~~l~ 87 (342)
.|..+++.+||++|++|.++++.. ...+||||||+.. +++++|++||++||||||+||||+.+++
T Consensus 19 ~l~~~~~~~vp~~~v~~~~~~p~~~~~~~~~~~~IPvIDl~~l~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGi~~~l~ 98 (361)
T PLN02758 19 ELRKSKPTTVPERFIRDMDERPDLASDTLHAPDDIPVIDFSRLVKGDNDELFSEILKLRLACEEWGFFQVINHGIELELL 98 (361)
T ss_pred HHHhcCCCCCCHHHcCCchhccccccccccCCCCCCeEEchhhcCCChHHHHHHHHHHHHHHHhCeEEEEecCCCCHHHH
Confidence 445567889999999999887721 4567999999732 2478999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCHHHHhhhccCCCCccccccccccCCCCCCcccccceeccCCcc-ccccCCCCCCchhhHHHHHHHH
Q 043251 88 KDAESEARRLFSLPSRQKLKALRAPAGATGYGIARITPFFDKYMWHEGFTIMGTSIH-DHAKQLWPHNHAKFCDVMETYQ 166 (342)
Q Consensus 88 ~~~~~~~~~fF~lP~e~K~~~~~~~~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~-~~~~~~wP~~~~~fr~~~~~y~ 166 (342)
+++++++++||+||.|+|+++...+..++||+.........+.||+|.|.++. .+. ....|.||+.+++||+.+++|+
T Consensus 99 ~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY~~~~~~~~~~~~d~~e~~~~~~-~p~~~~~~~~WP~~~~~fr~~~~~y~ 177 (361)
T PLN02758 99 EEIEKVAREFFMLPLEEKQKYPMAPGTVQGYGQAFVFSEDQKLDWCNMFALGV-EPHFIRNPKLWPTKPARFSETLEVYS 177 (361)
T ss_pred HHHHHHHHHHhcCCHHHHHHhcccCCCccccCcccccccccccCeeEEEEeec-cCccccccccCccccHHHHHHHHHHH
Confidence 99999999999999999999986555678997654433445679999998875 332 2457999998899999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCChhhhhhhhccCCccceeccccCCCCCccCCccccCCCCCCceEEEeeCC--CCceeEEe
Q 043251 167 KKMNILADQLTQLIFKSLDISEEQAEEMNWVGSSSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHENS--IAGLQIFK 244 (342)
Q Consensus 167 ~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~--~~GLqV~~ 244 (342)
++|.+|+.+|+++|+++||+++++|.+ .+....+.||++|||+|+.++..+|+++|||+|+||||+|++ ++||||++
T Consensus 178 ~~~~~l~~~ll~~la~~Lgl~~~~f~~-~~~~~~~~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~v~GLQV~~ 256 (361)
T PLN02758 178 REIRELCQRLLKYIAMTLGLKEDRFEE-MFGEAVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKGSCVGLQILK 256 (361)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhhHH-HhcCccceeeeecCCCCCCcccccCccCccCCceeEEEEeCCCCCCCeeeee
Confidence 999999999999999999999988873 444457899999999999988899999999999999999984 89999987
Q ss_pred cCCceEEecCCCCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCCcCCcc
Q 043251 245 QEVGWVSVKPVDGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVARYRPVT 321 (342)
Q Consensus 245 ~~g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~y~~~t 321 (342)
+ |+|++|+|.||++|||+||+||+||||+|||++|||+.++.++|||++||++|+.|++|.|++++ ++|++|++++
T Consensus 257 ~-g~Wi~V~p~pgalVVNiGD~L~~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~elv~~~~p~~Y~~~~ 335 (361)
T PLN02758 257 D-NTWVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSYEVELGPMPELVDDENPCKYRRYN 335 (361)
T ss_pred C-CEEEeCCCCCCeEEEEccchhhhhcCCeeecccceeecCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCCcCCCcc
Confidence 5 69999999999999999999999999999999999998888899999999999999999999988 6789999999
Q ss_pred HHHHHHHHHhChhh
Q 043251 322 VKEFISLKAKSPEK 335 (342)
Q Consensus 322 ~~e~~~~~~~~~~~ 335 (342)
++||+..+.+....
T Consensus 336 ~~ey~~~~~~~~~~ 349 (361)
T PLN02758 336 HGEYSRHYVTSKLQ 349 (361)
T ss_pred HHHHHHHHHhcccC
Confidence 99999998876553
No 4
>PLN02947 oxidoreductase
Probab=100.00 E-value=3.4e-76 Score=567.05 Aligned_cols=311 Identities=30% Similarity=0.533 Sum_probs=269.3
Q ss_pred ccccccCCCCCCCCCCcCCCCCCCCC---------CCCCCceeeCCCh------HHHHHHHHHHHhccEEEEEcCCCChH
Q 043251 21 IIPIDFNSVCSLPESHKWPKFDDLYD---------NKISVPVIDLRDP------RVAQLIGRACEKWGVFQLIYHGIPLN 85 (342)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~---------~~~~iPvIDls~~------~~~~~l~~A~~~~GFF~l~nhGi~~~ 85 (342)
++.|..+++++||++|++|+++++.. ...+||||||+.. +++++|++||++||||||+|||||.+
T Consensus 28 v~~l~~~~~~~vp~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~l~~Ac~~~GFF~v~nHGIp~~ 107 (374)
T PLN02947 28 VKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVNHGVPSE 107 (374)
T ss_pred HHHHHhcCCCcCCHHhcCCchhccccccccccccCCCCCCCeEECcccCCccHHHHHHHHHHHHHHCcEEEEEcCCCCHH
Confidence 45677788999999999999887721 4457999999842 57899999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCHHHHhhhccCC-CCccccccccccCCCCCCcccccceeccCCccccccCCCCCCchhhHHHHHH
Q 043251 86 VLKDAESEARRLFSLPSRQKLKALRAP-AGATGYGIARITPFFDKYMWHEGFTIMGTSIHDHAKQLWPHNHAKFCDVMET 164 (342)
Q Consensus 86 l~~~~~~~~~~fF~lP~e~K~~~~~~~-~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~ 164 (342)
+++++++.+++||+||.|+|+++.... ....||+.......+...+|+|.+.+.. .|.....|.||+.+++||+++++
T Consensus 108 li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~gyg~~~~~~~~~~~~~~e~~~~~~-~p~~~~~~~WP~~~~~fr~~~~~ 186 (374)
T PLN02947 108 VIGGMIDVARRFFELPLEERAKYMSADMRAPVRYGTSFNQNKDAVFCWRDFLKLVC-HPLSDVLPHWPSSPADLRKVAAT 186 (374)
T ss_pred HHHHHHHHHHHHhcCCHHHHhhhhcccCCCCeeeccccccccccccCceeceeeec-CCcccccccCccchHHHHHHHHH
Confidence 999999999999999999999986332 2346776433323345678999988765 45444468999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCh---hhhhhhhccCCccceeccccCCCCCccCCccccCCCCCCceEEEeeCCCCcee
Q 043251 165 YQKKMNILADQLTQLIFKSLDISE---EQAEEMNWVGSSSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHENSIAGLQ 241 (342)
Q Consensus 165 y~~~~~~l~~~ll~~l~~~Lgl~~---~~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLq 241 (342)
|+++|.+|+.+|+++|+++||++. ++|.+ .+....+.+|++|||+|++++..+|+++|||+|+||||+||+++|||
T Consensus 187 Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~-~~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Qd~v~GLQ 265 (374)
T PLN02947 187 YAKATKRLFLELMEAILESLGIVKRGSDELLE-EFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVEGLQ 265 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccchHHHHH-HhcCcceeeeeecCCCCCCcccccCCCCccCCCceEEEEecCCCCee
Confidence 999999999999999999999963 34442 33334789999999999999889999999999999999999999999
Q ss_pred EEecCCceEEecCCCCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCCcC
Q 043251 242 IFKQEVGWVSVKPVDGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVARYR 318 (342)
Q Consensus 242 V~~~~g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~y~ 318 (342)
|+. +|+|++|+|+||++||||||+||+||||+|||++|||+.++.++||||+||+.|+.|++|.|++++ ++|++|+
T Consensus 266 V~~-~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~lv~~~~p~~Y~ 344 (374)
T PLN02947 266 IMH-AGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPFERVVGPAPELVDEQNPRRYM 344 (374)
T ss_pred EeE-CCEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCC
Confidence 998 569999999999999999999999999999999999998888899999999999999999999998 6789999
Q ss_pred CccHHHHHHHHHhChh
Q 043251 319 PVTVKEFISLKAKSPE 334 (342)
Q Consensus 319 ~~t~~e~~~~~~~~~~ 334 (342)
+++++||+..+.+...
T Consensus 345 ~~~~~ey~~~~~~~~~ 360 (374)
T PLN02947 345 DTDFATFLAYLASAEG 360 (374)
T ss_pred CCCHHHHHHHHHHhcc
Confidence 9999999998765554
No 5
>PLN02904 oxidoreductase
Probab=100.00 E-value=8.3e-76 Score=561.99 Aligned_cols=311 Identities=30% Similarity=0.502 Sum_probs=269.0
Q ss_pred ccccccCCCCCCCCCCcCCCCCCCCC------CCCCCceeeCCC-------hHHHHHHHHHHHhccEEEEEcCCCChHHH
Q 043251 21 IIPIDFNSVCSLPESHKWPKFDDLYD------NKISVPVIDLRD-------PRVAQLIGRACEKWGVFQLIYHGIPLNVL 87 (342)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~------~~~~iPvIDls~-------~~~~~~l~~A~~~~GFF~l~nhGi~~~l~ 87 (342)
++.|..+++.+||++|++|.++++.. ....||+|||+. .+++++|++||++||||||+||||+.+++
T Consensus 16 ~~~l~~~~~~~vp~~~~~~~~~~p~~~~~~~~~~~~iPvIDls~~~~~~~r~~~~~~l~~Ac~~~GFf~v~nHGI~~~li 95 (357)
T PLN02904 16 AMTLTNSGVPHVPDRYVLPPSQRPMLGSSIGTSTITLPVIDLSLLHDPLLRSCVIHEIEMACKGFGFFQVINHGIPSSVV 95 (357)
T ss_pred hHHHHhcCCCCCCHHhCCCchhcccccccccccCCCCCEEECcccCCchhHHHHHHHHHHHHHHCceEEEEeCCCCHHHH
Confidence 45667788899999999999988732 235799999984 24688999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCHHHHhhhccC-CCCccccccccccCCCCCCcccccceeccCCccccccCCCCCCchhhHHHHHHHH
Q 043251 88 KDAESEARRLFSLPSRQKLKALRA-PAGATGYGIARITPFFDKYMWHEGFTIMGTSIHDHAKQLWPHNHAKFCDVMETYQ 166 (342)
Q Consensus 88 ~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~ 166 (342)
+++++++++||+||.|+|+++... ..++.||+.......+.+.+|+|.+.... .|.....|.||+.+++||+++++|+
T Consensus 96 ~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~-~p~~~~~n~WP~~~p~fr~~~~~y~ 174 (357)
T PLN02904 96 KDALDAATRFFDLPVDEKMLLVSDNVHEPVRYGTSLNHSTDRVHYWRDFIKHYS-HPLSKWINLWPSNPPCYKEKVGKYA 174 (357)
T ss_pred HHHHHHHHHHhcCCHHHHhhhcccCCCCcccccccccccCCCCCCceEEeeecc-CCcccccccCcccchHHHHHHHHHH
Confidence 999999999999999999998643 22345665432222334557888876543 3433346899998899999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCChhhhhhhhccCCccceeccccCCCCCccCCccccCCCCCCceEEEeeCCCCceeEEecC
Q 043251 167 KKMNILADQLTQLIFKSLDISEEQAEEMNWVGSSSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHENSIAGLQIFKQE 246 (342)
Q Consensus 167 ~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~ 246 (342)
++|.+|+.+|+++|+++||+++++|.+ .+....+.||++|||+|+.++..+|+++|||+|+||||+|+ ++||||+.++
T Consensus 175 ~~~~~l~~~ll~~la~~Lgl~~~~f~~-~~~~~~~~lrl~~YPp~p~~~~~~g~~~HtD~g~lTlL~qd-~~GLQV~~~~ 252 (357)
T PLN02904 175 EATHVLHKQLIEAISESLGLEKNYLQE-EIEEGSQVMAVNCYPACPEPEIALGMPPHSDFGSLTILLQS-SQGLQIMDCN 252 (357)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHH-HhcCcccEEEeeecCCCCCcccccCCcCccCCCceEEEecC-CCeeeEEeCC
Confidence 999999999999999999999988873 34344678999999999988889999999999999999997 5899999988
Q ss_pred CceEEecCCCCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCCcCCccHH
Q 043251 247 VGWVSVKPVDGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVARYRPVTVK 323 (342)
Q Consensus 247 g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~y~~~t~~ 323 (342)
|+|++|+|.||++||||||+||+||||+|||++|||+.++..+||||+||+.|+.|++|+|++++ ++|++|++++|+
T Consensus 253 g~Wi~V~p~pgalVVNiGD~Le~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~Pl~~~v~~~~p~~Y~~~~~~ 332 (357)
T PLN02904 253 KNWVCVPYIEGALIVQLGDQVEVMSNGIYKSVVHRVTVNKDYKRLSFASLHSLPLHKKISPAPELVNENKPAAYGEFSFN 332 (357)
T ss_pred CCEEECCCCCCeEEEEccHHHHHHhCCeeeccCCcccCCCCCCEEEEEEeecCCCCCeEeCCHHHcCCCCCCcCCCCCHH
Confidence 89999999999999999999999999999999999998888899999999999999999999988 678999999999
Q ss_pred HHHHHHHhChh
Q 043251 324 EFISLKAKSPE 334 (342)
Q Consensus 324 e~~~~~~~~~~ 334 (342)
||+..+.++..
T Consensus 333 ey~~~~~~~~~ 343 (357)
T PLN02904 333 DFLDYISSNDI 343 (357)
T ss_pred HHHHHHHhccc
Confidence 99998877664
No 6
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=100.00 E-value=1.7e-75 Score=559.73 Aligned_cols=309 Identities=30% Similarity=0.477 Sum_probs=266.6
Q ss_pred ccCCCCCCCCCCcCCCCCCCCC----CCCCCceeeCCCh--------HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHH
Q 043251 25 DFNSVCSLPESHKWPKFDDLYD----NKISVPVIDLRDP--------RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAES 92 (342)
Q Consensus 25 ~~~~~~~~p~~~~~~~~~~~~~----~~~~iPvIDls~~--------~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~ 92 (342)
+-+++.+||+.|+++..+++.. ....||||||+.. +++++|.+||++||||||+||||+.++++++++
T Consensus 8 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~li~~~~~ 87 (358)
T PLN02515 8 ALAGESTLQSSFVRDEDERPKVAYNQFSDEIPVISLAGIDEVGGRRGEICRKIVEACEDWGIFQVVDHGVDANLVADMTR 87 (358)
T ss_pred cccCCCcCCHHhcCCchhccCccccccCCCCCEEEChhccCCchHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHH
Confidence 4566789999999998887721 2347999999732 468899999999999999999999999999999
Q ss_pred HHHHhcCCCHHHHhhhccCCCCccccccccccCCCCCCcccccceeccCCcc-ccccCCCCCCchhhHHHHHHHHHHHHH
Q 043251 93 EARRLFSLPSRQKLKALRAPAGATGYGIARITPFFDKYMWHEGFTIMGTSIH-DHAKQLWPHNHAKFCDVMETYQKKMNI 171 (342)
Q Consensus 93 ~~~~fF~lP~e~K~~~~~~~~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~-~~~~~~wP~~~~~fr~~~~~y~~~~~~ 171 (342)
++++||+||.|+|+++.......+||............||+|.|.+.. .+. ....|.||+.+++||+++++|+++|.+
T Consensus 88 ~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~-~~~~~~~~n~WP~~~~~fr~~~~~y~~~~~~ 166 (358)
T PLN02515 88 LARDFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFS-YPVRTRDYSRWPDKPEGWRAVTEEYSEKLMG 166 (358)
T ss_pred HHHHHhcCCHHHHhhhCcCCCCccCcccccccccccccCceeeecccc-CcccccccccccccchHHHHHHHHHHHHHHH
Confidence 999999999999999875544467995322211224579999997653 333 244689999889999999999999999
Q ss_pred HHHHHHHHHHHhcCCChhhhhhhhccCCccceeccccCCCCCccCCccccCCCCCCceEEEeeCCCCceeEEecCC-ceE
Q 043251 172 LADQLTQLIFKSLDISEEQAEEMNWVGSSSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHENSIAGLQIFKQEV-GWV 250 (342)
Q Consensus 172 l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g-~W~ 250 (342)
|+.+|+++|+++||+++++|.+ .+....+.+|++|||+|+.++..+|+++|||+|+||||+||+++||||+.++| +|+
T Consensus 167 L~~~ll~~la~~Lgl~~~~f~~-~~~~~~~~lrl~~YP~~~~~~~~~G~~~HTD~g~lTlL~Qd~v~GLQV~~~~~~~Wi 245 (358)
T PLN02515 167 LACKLLEVLSEAMGLEKEALTK-ACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWI 245 (358)
T ss_pred HHHHHHHHHHHhcCCChhhHHH-hhcCccceEEEeecCCCCChhhccCCCCCCCCCeEEEEecCCCCceEEEECCCCeEE
Confidence 9999999999999999888863 34344678999999999988889999999999999999999999999988764 799
Q ss_pred EecCCCCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC--CCCCCcCCccHHHHHHH
Q 043251 251 SVKPVDGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS--GQVARYRPVTVKEFISL 328 (342)
Q Consensus 251 ~V~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~--~~p~~y~~~t~~e~~~~ 328 (342)
+|+|.||++|||+||+||+||||+|||++|||+.++..+||||+||++|+.|++|+|++.. ++|++|+++|++||+..
T Consensus 246 ~Vpp~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~i~Pl~~~~~~~p~~y~~~t~~eyl~~ 325 (358)
T PLN02515 246 TVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNCSRLSIATFQNPAPDATVYPLKVREGEKPILEEPITFAEMYRR 325 (358)
T ss_pred ECCCCCCeEEEEccHHHHHHhCCeeeeecceEECCCCCCEEEEEEEecCCCCCEEECCCcCCCCCCCcCCCcCHHHHHHH
Confidence 9999999999999999999999999999999998888899999999999999999999743 57899999999999999
Q ss_pred HHhChhh
Q 043251 329 KAKSPEK 335 (342)
Q Consensus 329 ~~~~~~~ 335 (342)
+...+.+
T Consensus 326 ~~~~~~~ 332 (358)
T PLN02515 326 KMSRDLE 332 (358)
T ss_pred HHhcccc
Confidence 8765553
No 7
>PLN02276 gibberellin 20-oxidase
Probab=100.00 E-value=4.5e-75 Score=558.44 Aligned_cols=302 Identities=32% Similarity=0.564 Sum_probs=266.2
Q ss_pred CCCCCCCcCCCCCCCC--CCCCCCceeeCCC-----h----HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhc
Q 043251 30 CSLPESHKWPKFDDLY--DNKISVPVIDLRD-----P----RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLF 98 (342)
Q Consensus 30 ~~~p~~~~~~~~~~~~--~~~~~iPvIDls~-----~----~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF 98 (342)
.+||+.|++|..++|. ....+||||||+. . +++++|.+||++||||||+||||+.++++++++++++||
T Consensus 18 ~~vp~~~~~~~~~~p~~~~~~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF 97 (361)
T PLN02276 18 SNIPAQFIWPDEEKPSAAVPELAVPLIDLGGFLSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMDAFF 97 (361)
T ss_pred CCCCHHhcCCccccCCCCCcCCCCCeEEChhhcCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 4799999999988773 2346899999973 1 367899999999999999999999999999999999999
Q ss_pred CCCHHHHhhhccCCCCccccccccccCCCCCCcccccceeccCCcc--------ccccCCCCCCchhhHHHHHHHHHHHH
Q 043251 99 SLPSRQKLKALRAPAGATGYGIARITPFFDKYMWHEGFTIMGTSIH--------DHAKQLWPHNHAKFCDVMETYQKKMN 170 (342)
Q Consensus 99 ~lP~e~K~~~~~~~~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~--------~~~~~~wP~~~~~fr~~~~~y~~~~~ 170 (342)
+||.|+|+++...+...+||.....+....+.||+|.|.++. .+. ...+|.||...++||+.+++|+..|.
T Consensus 98 ~LP~eeK~k~~~~~~~~~GY~~~~~~~~~~~~d~~E~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~fr~~~~~y~~~~~ 176 (361)
T PLN02276 98 KLPLSEKQRAQRKPGESCGYASSHTGRFSSKLPWKETLSFGY-HADGGSSPVVVDYFKSVLGEDFEQFGKVYQEYCEAMK 176 (361)
T ss_pred cCCHHHHHhhccCCCCccccCccCccccCCCCCeeeeEEEec-cCcccccccchhcccccCCcchHHHHHHHHHHHHHHH
Confidence 999999999876555678998765555445679999999874 221 12346788877899999999999999
Q ss_pred HHHHHHHHHHHHhcCCChhhhhhhhccCCccceeccccCCCCCccCCccccCCCCCCceEEEeeCCCCceeEEecCCceE
Q 043251 171 ILADQLTQLIFKSLDISEEQAEEMNWVGSSSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHENSIAGLQIFKQEVGWV 250 (342)
Q Consensus 171 ~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~ 250 (342)
+|+.+||++|+++||+++++|.+ .+....+.||++|||+|+.++..+|+++|||+|+||||+||+++||||+. +|+|+
T Consensus 177 ~l~~~ll~~la~~Lgl~~~~f~~-~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~-~g~Wi 254 (361)
T PLN02276 177 TLSLKIMELLGISLGVDRGYYRK-FFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQDQVGGLQVFV-DNKWR 254 (361)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHH-HhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEecCCCceEEEE-CCEEE
Confidence 99999999999999999888874 44445789999999999988888999999999999999999999999995 56999
Q ss_pred EecCCCCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCCcCCccHHHHHH
Q 043251 251 SVKPVDGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVARYRPVTVKEFIS 327 (342)
Q Consensus 251 ~V~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~y~~~t~~e~~~ 327 (342)
+|+|+||++||||||+||+||||+|||++|||+.++.++||||+||++|+.|++|.|++++ ++|++|++++|+||++
T Consensus 255 ~V~p~pgalVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~ 334 (361)
T PLN02276 255 SVRPRPGALVVNIGDTFMALSNGRYKSCLHRAVVNSERERRSLAFFLCPKEDKVVRPPQELVDREGPRKYPDFTWSDLLE 334 (361)
T ss_pred EcCCCCCeEEEEcHHHHHHHhCCccccccceeecCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHH
Confidence 9999999999999999999999999999999998888899999999999999999999988 6789999999999998
Q ss_pred HHHhChh
Q 043251 328 LKAKSPE 334 (342)
Q Consensus 328 ~~~~~~~ 334 (342)
.+..+..
T Consensus 335 ~~~~~~~ 341 (361)
T PLN02276 335 FTQKHYR 341 (361)
T ss_pred HHHHhcc
Confidence 7665544
No 8
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.5e-74 Score=550.63 Aligned_cols=302 Identities=32% Similarity=0.534 Sum_probs=260.7
Q ss_pred CCCCCCCCcCCCCCCCC----CCCCCCceeeCCCh---HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCCC
Q 043251 29 VCSLPESHKWPKFDDLY----DNKISVPVIDLRDP---RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSLP 101 (342)
Q Consensus 29 ~~~~p~~~~~~~~~~~~----~~~~~iPvIDls~~---~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~lP 101 (342)
.+++|+.|++++++++. ....+||||||+.. +++++|.+||++||||||+||||+.++++++++++++||+||
T Consensus 12 ~~~~p~~~~~~~~~~p~~~~~~~~~~iPvIDls~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~fF~LP 91 (337)
T PLN02639 12 HTTLPESYVRPESERPRLSEVSTCENVPVIDLGSPDRAQVVQQIGDACRRYGFFQVINHGVSAELVEKMLAVAHEFFRLP 91 (337)
T ss_pred cCcCCHHhcCCchhcccccccccCCCCCeEECCCccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHhcCC
Confidence 48999999999988772 24568999999853 578999999999999999999999999999999999999999
Q ss_pred HHHHhhhccC-CC-CccccccccccCCCCCCcccccceeccCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 043251 102 SRQKLKALRA-PA-GATGYGIARITPFFDKYMWHEGFTIMGTSIHDHAKQLWPHNHAKFCDVMETYQKKMNILADQLTQL 179 (342)
Q Consensus 102 ~e~K~~~~~~-~~-~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ 179 (342)
.|+|+++... +. ...+|...... .....+|+|.+.+.. .|.....|.||+.+++|++.+++|+++|.+|+.+|+++
T Consensus 92 ~e~K~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~-~p~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ 169 (337)
T PLN02639 92 VEEKMKLYSDDPTKTMRLSTSFNVR-KEKVHNWRDYLRLHC-YPLDKYVPEWPSNPPSFKEIVSTYCREVRELGFRLQEA 169 (337)
T ss_pred HHHHhhhhccCCCCccccccccccc-cCcccCchheEEeee-cCCcccchhCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999997532 22 22333222211 223568999998754 44444468899988999999999999999999999999
Q ss_pred HHHhcCCChhhhhhhhccCCccceeccccCCCCCccCCccccCCCCCCceEEEeeC-CCCceeEEecCCceEEecCCCCc
Q 043251 180 IFKSLDISEEQAEEMNWVGSSSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHEN-SIAGLQIFKQEVGWVSVKPVDGA 258 (342)
Q Consensus 180 l~~~Lgl~~~~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~~g~ 258 (342)
|+++||+++++|.+ .+....+.+|++|||+|+.++..+|+++|||+|+||||+|| +++||||+. +|+|++|+|.||+
T Consensus 170 la~~Lgl~~~~f~~-~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~-~g~Wi~V~p~pg~ 247 (337)
T PLN02639 170 ISESLGLEKDYIKN-VLGEQGQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDQQVAGLQVLK-DGKWVAVNPHPGA 247 (337)
T ss_pred HHHHcCCCHHHHHH-HhCCCccEEEEEcCCCCCCcccccCCCCCcCCCceEEEEecCCcCceEeec-CCeEEeccCCCCe
Confidence 99999999988863 34345779999999999988888999999999999999998 499999985 5699999999999
Q ss_pred EEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCCcCCccHHHHHHHHHhChh
Q 043251 259 LVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVARYRPVTVKEFISLKAKSPE 334 (342)
Q Consensus 259 ~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~y~~~t~~e~~~~~~~~~~ 334 (342)
+|||+||+||+||||+|||++|||+.++..+|||++||++|+.|++|.|++++ ++|++|++++++||++.+..+..
T Consensus 248 lVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~p~~~~e~~~~~~~~~~ 326 (337)
T PLN02639 248 FVINIGDQLQALSNGRYKSVWHRAVVNTDKERMSVASFLCPCDDAVISPAKKLTDDGTAAVYRDFTYAEYYKKFWSRNL 326 (337)
T ss_pred EEEechhHHHHHhCCeeeccCcccccCCCCCEEEEEEEecCCCCceEeCchHHcCCCCCCCCCCCCHHHHHHHHHhccC
Confidence 99999999999999999999999998888899999999999999999999988 67899999999999998875444
No 9
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.8e-74 Score=551.72 Aligned_cols=305 Identities=28% Similarity=0.524 Sum_probs=264.2
Q ss_pred CCCCCCCcCCCCCCCCC----CCCCCceeeCCCh------HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcC
Q 043251 30 CSLPESHKWPKFDDLYD----NKISVPVIDLRDP------RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFS 99 (342)
Q Consensus 30 ~~~p~~~~~~~~~~~~~----~~~~iPvIDls~~------~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~ 99 (342)
.++|..|++|..+++.. ...+||||||+.. +++++|.+||++||||||+||||+.++++++++++++||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGi~~~l~~~~~~~~~~FF~ 81 (345)
T PLN02750 2 GEIDPAFIQAPEHRPKFHLTNSDEEIPVIDLSVSTSHDKTEVASKIGEACKKWGFFQVINHGVPSELRQRVEKVAKEFFD 81 (345)
T ss_pred CCCCHHHcCCchhccCccccccCCCCCeEECCCCCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHc
Confidence 37899999998887721 2458999999842 4678999999999999999999999999999999999999
Q ss_pred CCHHHHhhhccCCCCccccccccccCCCCCCcccccceeccCCc---------cc----cccCCCCCCchhhHHHHHHHH
Q 043251 100 LPSRQKLKALRAPAGATGYGIARITPFFDKYMWHEGFTIMGTSI---------HD----HAKQLWPHNHAKFCDVMETYQ 166 (342)
Q Consensus 100 lP~e~K~~~~~~~~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~---------~~----~~~~~wP~~~~~fr~~~~~y~ 166 (342)
||.|+|+++.......+||... ....+..||+|.|.+....+ .. ..+|.||+.+++||+++++|+
T Consensus 82 LP~eeK~~~~~~~~~~~GY~~~--~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~ 159 (345)
T PLN02750 82 QTTEEKRKVKRDEVNPMGYHDS--EHTKNIRDWKEVFDFLVQDPTLVPASPDPEDTELRKLTNQWPQNPSHFRELCQEYA 159 (345)
T ss_pred CCHHHHHhhccCCCCccCcCcc--cccccCCCceeEEEEeecccccccccccccccccccccccCCCCcHHHHHHHHHHH
Confidence 9999999987554445799632 22234569999998864211 00 126899998899999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCChhhhhhhhccCCccceeccccCCCCCccCCccccCCCCCCceEEEeeCCCCceeEEe-c
Q 043251 167 KKMNILADQLTQLIFKSLDISEEQAEEMNWVGSSSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHENSIAGLQIFK-Q 245 (342)
Q Consensus 167 ~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~-~ 245 (342)
+.|.+|+.+|+++|+++||+++++|.+ .+....+.||++|||+|+.++..+|+++|||+|+||||+||+++||||+. .
T Consensus 160 ~~~~~l~~~ll~~la~~Lgl~~~~f~~-~~~~~~~~lR~~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~ 238 (345)
T PLN02750 160 RQVEKLAFKLLELISLSLGLPADRLNG-YFKDQISFARFNHYPPCPAPHLALGVGRHKDGGALTVLAQDDVGGLQISRRS 238 (345)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHH-HhcCcceEEEEEecCCCCCcccccCcCCCCCCCeEEEEecCCCCceEEeecC
Confidence 999999999999999999999988873 44445789999999999988788999999999999999999999999986 4
Q ss_pred CCceEEecCCCCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCCcCCccH
Q 043251 246 EVGWVSVKPVDGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVARYRPVTV 322 (342)
Q Consensus 246 ~g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~y~~~t~ 322 (342)
+|+|++|+|.||++||||||+||+||||+|||++|||+.+++++|||++||++|+.|++|+|++++ ++|++|+++++
T Consensus 239 ~g~Wi~V~p~pg~~vVNiGD~L~~~Tng~~~St~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~p~~~ 318 (345)
T PLN02750 239 DGEWIPVKPIPDAFIINIGNCMQVWTNDLYWSAEHRVVVNSQKERFSIPFFFFPSHYVNIKPLDELINEQNPPKYKEFNW 318 (345)
T ss_pred CCeEEEccCCCCeEEEEhHHHHHHHhCCeeecccceeccCCCCCEEEEEEeecCCCCCeecCcHHhcCCCCCCccCCccH
Confidence 679999999999999999999999999999999999998888899999999999999999999987 67899999999
Q ss_pred HHHHHHHHhChhhhh
Q 043251 323 KEFISLKAKSPEKAL 337 (342)
Q Consensus 323 ~e~~~~~~~~~~~~~ 337 (342)
+||+..+.+...+.+
T Consensus 319 ~e~~~~~~~~~~~~~ 333 (345)
T PLN02750 319 GKFFASRNRSDYKKL 333 (345)
T ss_pred HHHHHHHHhcccccc
Confidence 999999887655433
No 10
>PLN02704 flavonol synthase
Probab=100.00 E-value=1.8e-74 Score=549.72 Aligned_cols=301 Identities=32% Similarity=0.575 Sum_probs=263.9
Q ss_pred CCCCCCCCcCCCCCCCCC-----CCCCCceeeCCCh---HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCC
Q 043251 29 VCSLPESHKWPKFDDLYD-----NKISVPVIDLRDP---RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSL 100 (342)
Q Consensus 29 ~~~~p~~~~~~~~~~~~~-----~~~~iPvIDls~~---~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~l 100 (342)
+.+||+.|++|..++|.. ...+||||||++. +++++|.+||+++|||||+||||+.++++++++++++||+|
T Consensus 16 ~~~~p~~~~~~~~~~p~~~~~~~~~~~iPvIDls~~~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~L 95 (335)
T PLN02704 16 KETIPEEFIRSEKEQPAITTFHGVDPQVPTIDLSDPDEEKLTRLIAEASKEWGMFQIVNHGIPSEVISKLQKVGKEFFEL 95 (335)
T ss_pred cCCCCHHHcCCcccccccccccccCCCCCeEECCCccHHHHHHHHHHHHHHcCEEEEEcCCCCHHHHHHHHHHHHHHHcC
Confidence 679999999999988731 4567999999964 57789999999999999999999999999999999999999
Q ss_pred CHHHHhhhccCC--CCccccccccccCCCCCCcccccceeccCCcc-ccccCCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 043251 101 PSRQKLKALRAP--AGATGYGIARITPFFDKYMWHEGFTIMGTSIH-DHAKQLWPHNHAKFCDVMETYQKKMNILADQLT 177 (342)
Q Consensus 101 P~e~K~~~~~~~--~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~-~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll 177 (342)
|.|+|+++.... ..++||+........++.+|+|.+.... .+. ....|.||+.+++||+.+++|+++|.+|+.+|+
T Consensus 96 P~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~~~~d~~~~~~-~p~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll 174 (335)
T PLN02704 96 PQEEKEVYAKPPDSKSIEGYGTKLQKEPEGKKAWVDHLFHRI-WPPSAINYQFWPKNPPSYREVNEEYAKYLRGVADKLF 174 (335)
T ss_pred CHHHHHHhhccCCCcccccccccccccccCcccceeeeEeee-cCCcccchhhCccccchhHHHHHHHHHHHHHHHHHHH
Confidence 999999987543 3478997654444445678888775432 222 234578999889999999999999999999999
Q ss_pred HHHHHhcCCChhhhhhhhccCC--ccceeccccCCCCCccCCccccCCCCCCceEEEeeCCCCceeEEecCCceEEecCC
Q 043251 178 QLIFKSLDISEEQAEEMNWVGS--SSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHENSIAGLQIFKQEVGWVSVKPV 255 (342)
Q Consensus 178 ~~l~~~Lgl~~~~~~~~~~~~~--~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~ 255 (342)
++|+++||+++++|.+ .+.++ .+.+|++|||+|+.++..+|+++|||+|+||||+||+++||||+. +|+|++|+|.
T Consensus 175 ~~la~~Lgl~~~~f~~-~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~-~g~Wi~V~p~ 252 (335)
T PLN02704 175 KTLSLGLGLEEDELKE-AVGGEELEYLLKINYYPPCPRPDLALGVVAHTDMSAITILVPNEVQGLQVFR-DDHWFDVKYI 252 (335)
T ss_pred HHHHHHcCCCHHHHHH-HhcCCchhhhhhhhcCCCCCCcccccCccCccCCcceEEEecCCCCceeEeE-CCEEEeCCCC
Confidence 9999999999988873 33332 468999999999988888999999999999999999999999985 5699999999
Q ss_pred CCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCCcCCccHHHHHHHHHhC
Q 043251 256 DGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVARYRPVTVKEFISLKAKS 332 (342)
Q Consensus 256 ~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~y~~~t~~e~~~~~~~~ 332 (342)
||++||||||+||+||||+|||++|||+.++..+||||+||++|+.|++|.|++++ ++|++|++++++||+..+++.
T Consensus 253 pg~lvVNvGD~L~~~TNg~~kSt~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~p~~Y~~~~~~e~~~~~~~~ 332 (335)
T PLN02704 253 PNALVIHIGDQIEILSNGKYKSVLHRTTVNKEKTRMSWPVFLEPPSELAVGPLPKLINEDNPPKFKTKKFKDYVYCKLNK 332 (335)
T ss_pred CCeEEEEechHHHHHhCCeeecccceeecCCCCCeEEEEEEecCCCCceEeCChHhcCCCCCccCCCCCHHHHHHHHHhc
Confidence 99999999999999999999999999998888899999999999999999999988 678999999999999988764
No 11
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=1.8e-74 Score=551.35 Aligned_cols=304 Identities=27% Similarity=0.488 Sum_probs=260.9
Q ss_pred CCCCCCCCCCcCCCCCCCCC-----CCCCCceeeCCCh------HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHH
Q 043251 27 NSVCSLPESHKWPKFDDLYD-----NKISVPVIDLRDP------RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEAR 95 (342)
Q Consensus 27 ~~~~~~p~~~~~~~~~~~~~-----~~~~iPvIDls~~------~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~ 95 (342)
++++.||+.|++|.++++.. ...+||+|||+.. +++++|.+||++||||||+||||+.+++++++++++
T Consensus 13 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGI~~~l~~~~~~~~~ 92 (348)
T PLN02912 13 SVVDHVPSNYVRPVSDRPNMSEVETSGDSIPLIDLRDLHGPNRADIINQFAHACSSYGFFQIKNHGVPEETIKKMMNVAR 92 (348)
T ss_pred cCCCCCCHHhcCCchhccccccccccCCCCCeEECcccCCcCHHHHHHHHHHHHHHCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 67889999999998877621 3457999999842 467899999999999999999999999999999999
Q ss_pred HhcCCCHHHHhhhc-cCCC-CccccccccccCCCCCCcccccceeccCCccccccCCCCCCchhhHHHHHHHHHHHHHHH
Q 043251 96 RLFSLPSRQKLKAL-RAPA-GATGYGIARITPFFDKYMWHEGFTIMGTSIHDHAKQLWPHNHAKFCDVMETYQKKMNILA 173 (342)
Q Consensus 96 ~fF~lP~e~K~~~~-~~~~-~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~ 173 (342)
+||+||.|+|+++. ..+. ..+||..... ......+|+|.+.+.. .+.....|.||+.+++||+++++|+++|.+|+
T Consensus 93 ~FF~LP~eeK~k~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~-~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~ 170 (348)
T PLN02912 93 EFFHQSESERVKHYSADTKKTTRLSTSFNV-SKEKVSNWRDFLRLHC-YPIEDFIEEWPSTPISFREVTAEYATSVRALV 170 (348)
T ss_pred HHhcCCHHHHHhHhhcCCCCcccccccccc-cccccCCchheEEEee-cCcccccccCcchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999954 3222 2233332211 1234568999988754 34334578999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhhccCCccceeccccCCCCCccCCccccCCCCCCceEEEeeCCCCceeEEecCCceEEec
Q 043251 174 DQLTQLIFKSLDISEEQAEEMNWVGSSSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHENSIAGLQIFKQEVGWVSVK 253 (342)
Q Consensus 174 ~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~ 253 (342)
.+|+++|+++||+++++|.. .+....+.||++|||||+.++..+|+++|||+|+||||+||+++||||+. +|+|++|+
T Consensus 171 ~~il~~la~~Lgl~~~~f~~-~~~~~~~~lrl~~YPp~~~~~~~~G~~~HtD~g~lTlL~Qd~v~GLQV~~-~g~Wi~V~ 248 (348)
T PLN02912 171 LTLLEAISESLGLEKDRVSN-TLGKHGQHMAINYYPPCPQPELTYGLPGHKDANLITVLLQDEVSGLQVFK-DGKWIAVN 248 (348)
T ss_pred HHHHHHHHHHcCCCHHHHHH-HhcCccceeeeeecCCCCChhhcCCcCCCcCCCceEEEEECCCCceEEEE-CCcEEECC
Confidence 99999999999999888863 33344789999999999988888999999999999999999999999995 46999999
Q ss_pred CCCCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC---C--CCCCcCCccHHHHHHH
Q 043251 254 PVDGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---G--QVARYRPVTVKEFISL 328 (342)
Q Consensus 254 p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~--~p~~y~~~t~~e~~~~ 328 (342)
|.||++||||||+||+||||+|||++|||+.++.++|||++||++|+.|++|.|++++ + +|++|++++|+||+..
T Consensus 249 p~pgalvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~v~~~~~~p~~y~~~~~~ey~~~ 328 (348)
T PLN02912 249 PIPNTFIVNLGDQMQVISNDKYKSVLHRAVVNTDKERISIPTFYCPSEDAVIGPAQELINEEEDSLAIYRNFTYAEYFEK 328 (348)
T ss_pred CcCCeEEEEcCHHHHHHhCCEEEcccccccCCCCCCEEEEEEEecCCCCCeEeCCHHHhCcCCCCCCCCCCCcHHHHHHH
Confidence 9999999999999999999999999999998888899999999999999999999988 2 4789999999999998
Q ss_pred HHhChh
Q 043251 329 KAKSPE 334 (342)
Q Consensus 329 ~~~~~~ 334 (342)
+.++..
T Consensus 329 ~~~~~~ 334 (348)
T PLN02912 329 FWDTAF 334 (348)
T ss_pred HHhccc
Confidence 876444
No 12
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=100.00 E-value=1.6e-74 Score=554.79 Aligned_cols=308 Identities=28% Similarity=0.522 Sum_probs=266.7
Q ss_pred cccCCCCCCCCCCcCCCCCCCCC----------CCCCCceeeCCCh---------HHHHHHHHHHHhccEEEEEcCCCCh
Q 043251 24 IDFNSVCSLPESHKWPKFDDLYD----------NKISVPVIDLRDP---------RVAQLIGRACEKWGVFQLIYHGIPL 84 (342)
Q Consensus 24 ~~~~~~~~~p~~~~~~~~~~~~~----------~~~~iPvIDls~~---------~~~~~l~~A~~~~GFF~l~nhGi~~ 84 (342)
|..+++.+||+.|++|+++++.. ....||||||+.. +++++|.+||++||||||+||||+.
T Consensus 11 l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~ 90 (360)
T PLN03178 11 LASSGVSSIPKEYIRPPEERPSIGDVFEEEKKAAGPQVPVVDLSNIESDDEVVREACVEAVRAAAAEWGVMHLVGHGIPA 90 (360)
T ss_pred HHhcCCCCCCHHHcCCchhcccccccccccccccCCCCCEEEchhhcCCChhhHHHHHHHHHHHHHHCCEEEEEcCCCCH
Confidence 44567889999999999888732 3457999999832 4788999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCHHHHhhhccCC--CCccccccccccCCCCCCcccccceeccCCcc-ccccCCCCCCchhhHHH
Q 043251 85 NVLKDAESEARRLFSLPSRQKLKALRAP--AGATGYGIARITPFFDKYMWHEGFTIMGTSIH-DHAKQLWPHNHAKFCDV 161 (342)
Q Consensus 85 ~l~~~~~~~~~~fF~lP~e~K~~~~~~~--~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~-~~~~~~wP~~~~~fr~~ 161 (342)
++++++++++++||+||.|+|+++.... ..++||+........+..||+|.+.... .|. ....|.||+.+++||+.
T Consensus 91 ~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~-~p~~~~~~n~wP~~~p~fr~~ 169 (360)
T PLN03178 91 DLLDRVRKAGEAFFRLPIEEKEKYANDQARGAAQGYGSKLAANASGQLEWEDYFFHLT-LPEDKRDPSLWPKTPPDYVPA 169 (360)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhccCCCCCccccccccccccccccchhHhhcccc-CCccccccccCCCCchHHHHH
Confidence 9999999999999999999999997543 3578996644333345668999876543 332 23578999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhhhhhhhccC--C-ccceeccccCCCCCccCCccccCCCCCCceEEEeeCCCC
Q 043251 162 METYQKKMNILADQLTQLIFKSLDISEEQAEEMNWVG--S-SSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHENSIA 238 (342)
Q Consensus 162 ~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~--~-~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~ 238 (342)
+++|+++|.+|+.+|+++|+++||+++++|.+ .+.. . .+.||++|||+|+.++..+|+++|||+|+||||+||+++
T Consensus 170 ~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~-~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~v~ 248 (360)
T PLN03178 170 TSEYSRSLRSLATKLLAILSLGLGLPEDRLEK-EVGGLEELLLQMKINYYPRCPQPDLALGVEAHTDVSALTFILHNMVP 248 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HhcCcccchhhhheeccCCCCCCccccCcCCccCCCceEEEeeCCCC
Confidence 99999999999999999999999999988873 3332 2 568999999999988889999999999999999999999
Q ss_pred ceeEEecCCceEEecCCCCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCe-EecCCCC---CCC
Q 043251 239 GLQIFKQEVGWVSVKPVDGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDST-VVPIVKS---GQV 314 (342)
Q Consensus 239 GLqV~~~~g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~-i~pl~~~---~~p 314 (342)
||||+.+ |+|++|+|.||++||||||+||+||||+|||++|||+.++..+||||+||++|+.|++ +.|++++ ++|
T Consensus 249 GLQV~~~-g~Wi~V~p~pg~lvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~d~~v~~pl~~~v~~~~p 327 (360)
T PLN03178 249 GLQVLYE-GKWVTAKCVPDSIVVHIGDTLEILSNGRYKSILHRGLVNKEKVRISWAVFCEPPKEKIILKPLPELVSKEEP 327 (360)
T ss_pred ceeEeEC-CEEEEcCCCCCeEEEEccHHHHHHhCCccccccceeecCCCCCeEEEEEEecCCcccccccCcHHHcCCCCc
Confidence 9999964 6999999999999999999999999999999999999888888999999999999875 5999988 678
Q ss_pred CCcCCccHHHHHHHHHhChh
Q 043251 315 ARYRPVTVKEFISLKAKSPE 334 (342)
Q Consensus 315 ~~y~~~t~~e~~~~~~~~~~ 334 (342)
++|++++++||+..+.+...
T Consensus 328 ~~y~p~~~~eyl~~~~~~~~ 347 (360)
T PLN03178 328 PKFPPRTFGQHVSHKLFKKP 347 (360)
T ss_pred ccCCCccHHHHHHHHHhccc
Confidence 89999999999999877554
No 13
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=100.00 E-value=2.6e-74 Score=553.35 Aligned_cols=308 Identities=30% Similarity=0.568 Sum_probs=267.2
Q ss_pred cccccCCCCCCCCCCcCCCCCCCC-------CCCCCCceeeCCC---------hHHHHHHHHHHHhccEEEEEcCCCChH
Q 043251 22 IPIDFNSVCSLPESHKWPKFDDLY-------DNKISVPVIDLRD---------PRVAQLIGRACEKWGVFQLIYHGIPLN 85 (342)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~-------~~~~~iPvIDls~---------~~~~~~l~~A~~~~GFF~l~nhGi~~~ 85 (342)
..|..++++++|+.|++|+++++. ...++||+|||+. .+++++|.+||++||||||+||||+.+
T Consensus 16 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~r~~~~~~l~~Ac~~~GFF~l~nHGI~~~ 95 (362)
T PLN02393 16 QSLSESGLPTIPDRYVKPPSQRPNSSNTTSAPAEINIPVIDLSSLFSDDARLRDATLRAISEACREWGFFQVVNHGVRPE 95 (362)
T ss_pred HHHHhcCCCcCCHHHcCCchhccccccccccCcCCCCCeEECccccCCChHHHHHHHHHHHHHHHHCcEEEEEeCCCCHH
Confidence 345556789999999999988773 2456899999983 247889999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCHHHHhhhccCCCCccccccc-cccCCCCCCcccccceeccCCcc-ccccCCCCCCchhhHHHHH
Q 043251 86 VLKDAESEARRLFSLPSRQKLKALRAPAGATGYGIA-RITPFFDKYMWHEGFTIMGTSIH-DHAKQLWPHNHAKFCDVME 163 (342)
Q Consensus 86 l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~GY~~~-~~~~~~~~~d~~E~~~~~~~~~~-~~~~~~wP~~~~~fr~~~~ 163 (342)
+++++++++++||+||.|+|+++...+..++||+.. +.+ .....||+|.|.+.. .+. ....|.||+.+++|+++++
T Consensus 96 li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~Gy~~~~~~~-~~~~~d~~e~~~~~~-~~~~~~~~n~wP~~~~~fr~~~~ 173 (362)
T PLN02393 96 LMDRAREAWREFFHLPLEVKQRYANSPATYEGYGSRLGVE-KGAILDWSDYYFLHY-LPSSLKDPNKWPSLPPSCRELIE 173 (362)
T ss_pred HHHHHHHHHHHHHcCCHHHHHhhhcccCcccccccccccc-cccccCchhheeeee-cCccccchhhCcccchHHHHHHH
Confidence 999999999999999999999998665668999532 222 234678999988754 232 2356899998899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhhhhhhhccCC---ccceeccccCCCCCccCCccccCCCCCCceEEEeeC-CCCc
Q 043251 164 TYQKKMNILADQLTQLIFKSLDISEEQAEEMNWVGS---SSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHEN-SIAG 239 (342)
Q Consensus 164 ~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~---~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~G 239 (342)
+|+++|.+++.+||++|+++||+++++|.+ .+... .+.||++|||+|+.++..+|+++|||+|+||||+|+ +++|
T Consensus 174 ~y~~~~~~la~~ll~~la~~Lgl~~~~f~~-~~~~~~~~~~~lRl~~YP~~p~~~~~~g~~~HtD~g~lTlL~q~~~v~G 252 (362)
T PLN02393 174 EYGEEVVKLCGRLMKVLSVNLGLEEDRLQN-AFGGEDGVGACLRVNYYPKCPQPDLTLGLSPHSDPGGMTILLPDDNVAG 252 (362)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HhCCCccccceeeeeecCCCCCcccccccccccCCceEEEEeeCCCCCc
Confidence 999999999999999999999999988873 33322 368999999999988888999999999999999985 6999
Q ss_pred eeEEecCCceEEecCCCCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCC
Q 043251 240 LQIFKQEVGWVSVKPVDGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVAR 316 (342)
Q Consensus 240 LqV~~~~g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~ 316 (342)
|||+. +|+|++|+|.||++|||+||+||+||||+|||++|||+.++.++||||+||++|+.|++|.|++++ ++|++
T Consensus 253 LQV~~-~g~W~~V~p~pgalVVNiGD~l~~~Tng~~kSt~HRVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~ 331 (362)
T PLN02393 253 LQVRR-DDAWITVKPVPDAFIVNIGDQIQVLSNAIYKSVEHRVIVNSAKERVSLAFFYNPKSDLPIEPLKELVTPDRPAL 331 (362)
T ss_pred ceeeE-CCEEEECCCCCCeEEEEcchhhHhhcCCeeeccceecccCCCCCEEEEEEEecCCCCceEeCcHHhcCCCCCCC
Confidence 99994 569999999999999999999999999999999999998888899999999999999999999988 67899
Q ss_pred cCCccHHHHHHHHHhCh
Q 043251 317 YRPVTVKEFISLKAKSP 333 (342)
Q Consensus 317 y~~~t~~e~~~~~~~~~ 333 (342)
|++++++||+..+..+.
T Consensus 332 y~~~~~~ey~~~~~~~~ 348 (362)
T PLN02393 332 YPPMTFDEYRLFIRTKG 348 (362)
T ss_pred CCCccHHHHHHHHHhcc
Confidence 99999999998766444
No 14
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.4e-72 Score=533.19 Aligned_cols=286 Identities=25% Similarity=0.436 Sum_probs=248.0
Q ss_pred CCCCceeeCCCh---HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhccCCCCcccccccccc
Q 043251 48 KISVPVIDLRDP---RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSLPSRQKLKALRAPAGATGYGIARIT 124 (342)
Q Consensus 48 ~~~iPvIDls~~---~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~GY~~~~~~ 124 (342)
...||+|||++. .++++|++||++||||||+||||+.++++++++++++||+||.|+|+++... ..++||.+.+.+
T Consensus 12 ~~~iP~IDl~~~~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~~~-~~~~GY~~~~~e 90 (332)
T PLN03002 12 VSSLNCIDLANDDLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVLRN-EKHRGYTPVLDE 90 (332)
T ss_pred CCCCCEEeCCchhHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccC-CCCCCcCccccc
Confidence 457999999854 5788999999999999999999999999999999999999999999998654 347899876544
Q ss_pred CCC----CCCcccccceeccCCccc--------cccCCCCCC--chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh
Q 043251 125 PFF----DKYMWHEGFTIMGTSIHD--------HAKQLWPHN--HAKFCDVMETYQKKMNILADQLTQLIFKSLDISEEQ 190 (342)
Q Consensus 125 ~~~----~~~d~~E~~~~~~~~~~~--------~~~~~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~ 190 (342)
... ...||+|.|.++.+.+.+ ..+|.||+. .++||+.+++|+++|.+|+.+|+++|+++||+++++
T Consensus 91 ~~~~~~~~~~d~kE~f~~~~~~p~~~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 170 (332)
T PLN03002 91 KLDPKNQINGDHKEGYYIGIEVPKDDPHWDKPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIAKLLALALDLDVGY 170 (332)
T ss_pred ccccccCCCCcceeeeEecccCCCCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 322 236999999987522221 247999985 689999999999999999999999999999999888
Q ss_pred hhhh-hccCCccceeccccCCCCCcc-CCccccCCCCCCceEEEeeCCCCceeEEecC----CceEEecCCCCcEEEEcc
Q 043251 191 AEEM-NWVGSSSALQLNSYPSCPEPN-RAVGLAPHTDTSLITILHENSIAGLQIFKQE----VGWVSVKPVDGALVVNVG 264 (342)
Q Consensus 191 ~~~~-~~~~~~~~lrl~~YP~~~~~~-~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~----g~W~~V~p~~g~~vVniG 264 (342)
|.+. .+..+.+.||++|||+|+.++ ..+|+++|||+|+||||+||+++||||+.++ |+|++|+|+||++|||||
T Consensus 171 f~~~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~~~~~~g~Wi~Vpp~pg~~VVNiG 250 (332)
T PLN03002 171 FDRTEMLGKPIATMRLLRYQGISDPSKGIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEYVPPIKGAFIVNLG 250 (332)
T ss_pred hccccccCCCchheeeeeCCCCCCcccCccccccccCCCeEEEEeeCCCCceEEecCCCCCCCcEEECCCCCCeEEEEHH
Confidence 8631 122346889999999998765 4789999999999999999999999998753 689999999999999999
Q ss_pred chhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCCcCCccHHHHHHHHHhChhh
Q 043251 265 DLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVARYRPVTVKEFISLKAKSPEK 335 (342)
Q Consensus 265 d~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~y~~~t~~e~~~~~~~~~~~ 335 (342)
|+||+||||+|||++|||+.+. .+||||+||++|+.|++|+|++++ ++|++|++++++||+..+.+....
T Consensus 251 D~L~~wTng~~kSt~HRVv~~~-~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~~~~~~e~l~~~~~~~~~ 323 (332)
T PLN03002 251 DMLERWSNGFFKSTLHRVLGNG-QERYSIPFFVEPNHDCLVECLPTCKSESDLPKYPPIKCSTYLTQRYEETHA 323 (332)
T ss_pred HHHHHHhCCeeECcCCeecCCC-CCeeEEEEEecCCCCeeEecCCcccCCCCcccCCCccHHHHHHHHHHHHhh
Confidence 9999999999999999999764 579999999999999999999998 678999999999999998875554
No 15
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.7e-72 Score=535.45 Aligned_cols=294 Identities=26% Similarity=0.467 Sum_probs=253.9
Q ss_pred CCCCCCCcCCCCCCC----C---CCCCCCceeeCCCh--------HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHH
Q 043251 30 CSLPESHKWPKFDDL----Y---DNKISVPVIDLRDP--------RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEA 94 (342)
Q Consensus 30 ~~~p~~~~~~~~~~~----~---~~~~~iPvIDls~~--------~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~ 94 (342)
..+|+.|++|+.+.+ . ....+||||||+.. +++++|++||++||||||+||||+.++++++++++
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~~~~~~~~~~~~~~~l~~A~~~~GFf~l~nHGI~~~l~~~~~~~~ 96 (348)
T PLN00417 17 EGLPERYLHTPTGDGEGQPLNGAVPEMDIPAIDLSLLLSSSDDGREELSKLHSALSTWGVVQVMNHGITEAFLDKIYKLT 96 (348)
T ss_pred CCCCccccCCcccccccccccccccCCCCCeEEChhhcCCCchHHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHH
Confidence 489999999998853 1 13458999999832 35789999999999999999999999999999999
Q ss_pred HHhcCCCHHHHhhhccCCCCccccccccccCCCCCCcccccceeccCCcc-ccccCCCCCCchhhHHHHHHHHHHHHHHH
Q 043251 95 RRLFSLPSRQKLKALRAPAGATGYGIARITPFFDKYMWHEGFTIMGTSIH-DHAKQLWPHNHAKFCDVMETYQKKMNILA 173 (342)
Q Consensus 95 ~~fF~lP~e~K~~~~~~~~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~-~~~~~~wP~~~~~fr~~~~~y~~~~~~l~ 173 (342)
++||+||.|+|+++......++||+...........||+|.+.+.. .|. ....|.||+.+++||+++++|+++|.+|+
T Consensus 97 ~~FF~LP~eeK~~~~~~~~~~~GY~~~~~~~~~~~~d~~e~~~~~~-~p~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~ 175 (348)
T PLN00417 97 KQFFALPTEEKQKCAREIGSIQGYGNDMILSDDQVLDWIDRLYLTT-YPEDQRQLKFWPQVPVGFRETLHEYTMKQRLVI 175 (348)
T ss_pred HHHHcCCHHHHHHhhcCCCCccccccccccccCCCcCccceeeccc-CCcccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986555678997643222234678999887754 332 23468999988999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhhhccCC-ccceeccccCCCCCccCCccccCCCCCCceEEEeeC-CCCceeEEecCCceEE
Q 043251 174 DQLTQLIFKSLDISEEQAEEMNWVGS-SSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHEN-SIAGLQIFKQEVGWVS 251 (342)
Q Consensus 174 ~~ll~~l~~~Lgl~~~~~~~~~~~~~-~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~ 251 (342)
.+|+++|+++||+++++|.+ .+..+ .+.||++|||+|+.++..+|+++|||+|+||||+|+ +++||||+. +|+|++
T Consensus 176 ~~ll~~la~~LGl~~~~f~~-~~~~~~~~~lRl~~YPp~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~-~g~Wi~ 253 (348)
T PLN00417 176 EKFFKAMARSLELEENCFLE-MYGENATMDTRFNMYPPCPRPDKVIGVKPHADGSAFTLLLPDKDVEGLQFLK-DGKWYK 253 (348)
T ss_pred HHHHHHHHHHcCCCHHHHHH-HhccCccceeeeeecCCCCCcccccCCcCccCCCceEEEEecCCCCceeEeE-CCeEEE
Confidence 99999999999999988874 33332 467999999999988888999999999999999997 699999985 569999
Q ss_pred ecCCCCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCCcCCccHHHHH
Q 043251 252 VKPVDGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVARYRPVTVKEFI 326 (342)
Q Consensus 252 V~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~y~~~t~~e~~ 326 (342)
|+|.||++||||||+||+||||+|||++|||+.++..+|||++||++|+.|++|+|++++ ++|++|+++|.+++.
T Consensus 254 V~p~pg~lVVNiGD~Le~~Tng~~kSt~HRVv~~~~~~R~Si~fF~~P~~d~~i~pl~~~v~~~~p~~Y~~~~~~~~~ 331 (348)
T PLN00417 254 APIVPDTILINVGDQMEIMSNGIYKSPVHRVVTNREKERISVATFCIPGADKEIQPVDGLVSEARPRLYKTVKKYVEL 331 (348)
T ss_pred CCCCCCcEEEEcChHHHHHhCCeecccceEEecCCCCCEEEEEEEecCCCCceecCchHhcCCCCCCCCCCHHHHHHH
Confidence 999999999999999999999999999999998888899999999999999999999988 688999999954433
No 16
>PLN02997 flavonol synthase
Probab=100.00 E-value=6.2e-72 Score=528.96 Aligned_cols=279 Identities=28% Similarity=0.521 Sum_probs=246.8
Q ss_pred CCCCCceeeCCCh---HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhccCCCCccccccccc
Q 043251 47 NKISVPVIDLRDP---RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSLPSRQKLKALRAPAGATGYGIARI 123 (342)
Q Consensus 47 ~~~~iPvIDls~~---~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~GY~~~~~ 123 (342)
...+||||||+.. +++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ..++||.....
T Consensus 29 ~~~~IPvIDls~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~-~~~~GY~~~~~ 107 (325)
T PLN02997 29 SAVDVPVVDLSVSDEDFLVREVVKASEEWGVFQVVNHGIPTELMRQLQMVGKQFFELPEAEKETVAKE-EDFEGYKRNYL 107 (325)
T ss_pred CCCCCCeEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC-CCccccCcccc
Confidence 4568999999853 5789999999999999999999999999999999999999999999998753 34789976432
Q ss_pred cCCCCCCcccccceeccCCcc-ccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhhhhccCC--c
Q 043251 124 TPFFDKYMWHEGFTIMGTSIH-DHAKQLWPHNHAKFCDVMETYQKKMNILADQLTQLIFKSLDISEEQAEEMNWVGS--S 200 (342)
Q Consensus 124 ~~~~~~~d~~E~~~~~~~~~~-~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~--~ 200 (342)
.+..||+|.+.... .+. ....|.||+.+++||+++++|++.|.+|+.+|+++|+++||+++++|.+ .+... .
T Consensus 108 ---~~~~d~~e~~~~~~-~p~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ia~~Lgl~~~~f~~-~~~~~~~~ 182 (325)
T PLN02997 108 ---GGINNWDEHLFHRL-SPPSIINYKYWPKNPPQYREVTEEYTKHMKRLTEKILGWLSEGLGLPRETFTQ-SIGGETAE 182 (325)
T ss_pred ---cCCCCccceeEeee-cCccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HhcCCccc
Confidence 34568999876543 232 2345899998899999999999999999999999999999999988874 33333 4
Q ss_pred cceeccccCCCCCccCCccccCCCCCCceEEEeeCCCCceeEEecCCceEEecCCCCcEEEEccchhhhhhCCccCCccc
Q 043251 201 SALQLNSYPSCPEPNRAVGLAPHTDTSLITILHENSIAGLQIFKQEVGWVSVKPVDGALVVNVGDLFHILSNARFPNVLH 280 (342)
Q Consensus 201 ~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~~H 280 (342)
+.||++|||+|+.++..+|+++|||+|+||||+||+++||||+.+ |+|++|+|.||++||||||+||+||||+|||++|
T Consensus 183 ~~lRl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~-g~Wi~V~p~pgalvVNiGD~Le~~TNG~~kSt~H 261 (325)
T PLN02997 183 YVLRVNFYPPTQDTELVIGAAAHSDMGAIALLIPNEVPGLQAFKD-EQWLDLNYINSAVVVIIGDQLMRMTNGRFKNVLH 261 (325)
T ss_pred ceeeeecCCCCCCcccccCccCccCCCceEEEecCCCCCEEEeEC-CcEEECCCCCCeEEEEechHHHHHhCCccccccc
Confidence 589999999999888889999999999999999999999999965 5999999999999999999999999999999999
Q ss_pred ccccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCCcCCccHHHHHHHHHhC
Q 043251 281 RVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVARYRPVTVKEFISLKAKS 332 (342)
Q Consensus 281 RV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~y~~~t~~e~~~~~~~~ 332 (342)
||+.+...+|||++||++|+.|++|+|++++ ++|++|++++++||+..+++.
T Consensus 262 RVv~~~~~~R~Si~fF~~P~~d~~i~Plp~~v~~~~p~~y~~~~~~e~l~~r~~~ 316 (325)
T PLN02997 262 RAKTDKERLRISWPVFVAPRADMSVGPLPELTGDENPPKFETLIYNDYIDQKIRG 316 (325)
T ss_pred eeeCCCCCCEEEEEEEecCCCCCeEeCChHHcCCCCCCcCCCccHHHHHHHHHhh
Confidence 9998877889999999999999999999987 678899999999999998763
No 17
>PTZ00273 oxidase reductase; Provisional
Probab=100.00 E-value=5.4e-72 Score=530.51 Aligned_cols=286 Identities=27% Similarity=0.477 Sum_probs=250.3
Q ss_pred CCCCceeeCCCh---------HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhccC-CCCccc
Q 043251 48 KISVPVIDLRDP---------RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSLPSRQKLKALRA-PAGATG 117 (342)
Q Consensus 48 ~~~iPvIDls~~---------~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~G 117 (342)
.++||||||+.. +++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++... ...++|
T Consensus 3 ~~~iPvIDl~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~G 82 (320)
T PTZ00273 3 RASLPVIDVSPLFGGESAEKMRVAKQIDEACRTWGFFYIVGHPIPQERIEKVLKMAKTFFSLPMEEKLKIDIRKSRLHRG 82 (320)
T ss_pred CCCCCEEecHHhcCCChHHHHHHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCCC
Confidence 467999999731 3678999999999999999999999999999999999999999999998643 345789
Q ss_pred cccccccCC--CCCCcccccceeccCCccc----------cccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 043251 118 YGIARITPF--FDKYMWHEGFTIMGTSIHD----------HAKQLWPHNHAKFCDVMETYQKKMNILADQLTQLIFKSLD 185 (342)
Q Consensus 118 Y~~~~~~~~--~~~~d~~E~~~~~~~~~~~----------~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lg 185 (342)
|...+.+.. ....||+|.|.++...|.. ..+|.||+.+++|++++++|+++|.+|+.+|+++|+++||
T Consensus 83 Y~~~~~e~~~~~~~~d~kE~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lg 162 (320)
T PTZ00273 83 YGAFGAEQLDPSKPYDYKETFDMGCHLPKDHPDVMAGKPLRGPNNHPTQVEGWMELMETHYRDMQALALVLLRALALAIG 162 (320)
T ss_pred CCCccccccCCCCCCCccceEEeeccCCcccchhhccccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 987654432 2356999999987422211 2479999989999999999999999999999999999999
Q ss_pred CChhhhhhhhccCCccceeccccCCCCCc-cCCccccCCCCCCceEEEeeCCCCceeEEecCCceEEecCCCCcEEEEcc
Q 043251 186 ISEEQAEEMNWVGSSSALQLNSYPSCPEP-NRAVGLAPHTDTSLITILHENSIAGLQIFKQEVGWVSVKPVDGALVVNVG 264 (342)
Q Consensus 186 l~~~~~~~~~~~~~~~~lrl~~YP~~~~~-~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~~g~~vVniG 264 (342)
+++++|.+ .+..+.+.||++|||+++.+ +..+|+++|||+|+||||+||.++||||+..+|+|++|+|.||++|||+|
T Consensus 163 l~~~~f~~-~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~GLqV~~~~g~Wi~V~p~pg~lvVNvG 241 (320)
T PTZ00273 163 LREDFFDS-KFMEPLSVFRMKHYPALPQTKKGRTVCGEHTDYGIITLLYQDSVGGLQVRNLSGEWMDVPPLEGSFVVNIG 241 (320)
T ss_pred cCHHHHHH-hhCCCcceeeeeecCCCCCccccCcccccccCCCeEEEEecCCCCceEEECCCCCEEeCCCCCCeEEEEHH
Confidence 99988874 44455788999999999864 46789999999999999999999999999877899999999999999999
Q ss_pred chhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCCcCCccHHHHHHHHHhChhh
Q 043251 265 DLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVARYRPVTVKEFISLKAKSPEK 335 (342)
Q Consensus 265 d~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~y~~~t~~e~~~~~~~~~~~ 335 (342)
|+||+||||+|||++|||+.+ ..+|||++||++|+.|++|.|++++ ++|++|++++++||+..+++....
T Consensus 242 D~l~~~TnG~~kSt~HRVv~~-~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~~~~~e~~~~~~~~~~~ 314 (320)
T PTZ00273 242 DMMEMWSNGRYRSTPHRVVNT-GVERYSMPFFCEPNPNVIIKCLDNCHSEENPPKYPPVRAVDWLLKRFAETYA 314 (320)
T ss_pred HHHHHHHCCeeeCCCccccCC-CCCeEEEEEEEcCCCCceEecCccccCCCCcccCCceeHHHHHHHHHHHHHH
Confidence 999999999999999999844 5789999999999999999999988 678999999999999998765543
No 18
>PLN02485 oxidoreductase
Probab=100.00 E-value=9.3e-72 Score=530.59 Aligned_cols=285 Identities=28% Similarity=0.443 Sum_probs=248.9
Q ss_pred CCCCceeeCCCh----------------HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhccC
Q 043251 48 KISVPVIDLRDP----------------RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSLPSRQKLKALRA 111 (342)
Q Consensus 48 ~~~iPvIDls~~----------------~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~ 111 (342)
...||||||+.. +++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++...
T Consensus 5 ~~~iPvIDl~~l~~~~~~~~~~~~~~~~~~~~~l~~Ac~~~GFf~l~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~ 84 (329)
T PLN02485 5 FKSIPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEKLKIKMT 84 (329)
T ss_pred CCCCCeEechhhhccCcccccccchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccc
Confidence 467999999631 3678999999999999999999999999999999999999999999998754
Q ss_pred -CCCccccccccccCCCCCCcccccceeccCC-cc--------ccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043251 112 -PAGATGYGIARITPFFDKYMWHEGFTIMGTS-IH--------DHAKQLWPHNHAKFCDVMETYQKKMNILADQLTQLIF 181 (342)
Q Consensus 112 -~~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~-~~--------~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~ 181 (342)
...++||.+.+.+...++.||+|.|.+..+. +. ...+|.||+.+++||+.+++|+++|.+++.+|+++|+
T Consensus 85 ~~~~~rGY~~~g~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~~a 164 (329)
T PLN02485 85 PAAGYRGYQRIGENVTKGKPDMHEAIDCYREFKPGKYGDLGKVMEGPNQWPENPQEFKALMEEYIKLCTDLSRKILRGIA 164 (329)
T ss_pred CCCCCCCcccccccccCCCCCcchhhhhcccCCCCcccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457899876655445667999999875411 11 1347999998999999999999999999999999999
Q ss_pred HhcCCChhhhhhhhccC-CccceeccccCCCCC----ccCCccccCCCCCCceEEEeeC-CCCceeEEecCCceEEecCC
Q 043251 182 KSLDISEEQAEEMNWVG-SSSALQLNSYPSCPE----PNRAVGLAPHTDTSLITILHEN-SIAGLQIFKQEVGWVSVKPV 255 (342)
Q Consensus 182 ~~Lgl~~~~~~~~~~~~-~~~~lrl~~YP~~~~----~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~ 255 (342)
++||+++++|.+ .+.+ +.+.||++|||+++. ++..+|+++|||+|+||||+|+ +++||||+..+|+|++|+|.
T Consensus 165 ~~Lgl~~~~f~~-~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~~~~g~Wi~V~p~ 243 (329)
T PLN02485 165 LALGGSPDEFEG-KMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTDYGLLTLVNQDDDITALQVRNLSGEWIWAIPI 243 (329)
T ss_pred HHcCCChHHhhh-hhccCccceEEEEeCCCCccccCCcccCcccccccCCCeEEEEeccCCCCeeeEEcCCCcEEECCCC
Confidence 999999888863 3333 467899999999975 4467899999999999999997 58999999878899999999
Q ss_pred CCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC-----CCCCCcCCccHHHHHHHHH
Q 043251 256 DGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS-----GQVARYRPVTVKEFISLKA 330 (342)
Q Consensus 256 ~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~-----~~p~~y~~~t~~e~~~~~~ 330 (342)
||++||||||+||+||||+|||++|||+.++..+|||++||++|+.|++|+|++++ ++|++|+++|++||+..++
T Consensus 244 pg~~vVNiGD~L~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~~y~~~t~~e~~~~~~ 323 (329)
T PLN02485 244 PGTFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYETNFDAAVEPLDICKEKRTGGSQVFKRVVYGEHLVNKV 323 (329)
T ss_pred CCcEEEEhHHHHHHHHCCEeeCCCceecCCCCCCeEEEEEEecCCCCceeecchhhcccccCCCCCCCcEeHHHHHHHHH
Confidence 99999999999999999999999999998888899999999999999999999876 3578999999999999987
Q ss_pred hCh
Q 043251 331 KSP 333 (342)
Q Consensus 331 ~~~ 333 (342)
+..
T Consensus 324 ~~~ 326 (329)
T PLN02485 324 LTN 326 (329)
T ss_pred HHh
Confidence 644
No 19
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=100.00 E-value=2.6e-71 Score=525.96 Aligned_cols=281 Identities=32% Similarity=0.538 Sum_probs=244.1
Q ss_pred CCCceeeCCChHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhccCCCCccccccccccCCCC
Q 043251 49 ISVPVIDLRDPRVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSLPSRQKLKALRAPAGATGYGIARITPFFD 128 (342)
Q Consensus 49 ~~iPvIDls~~~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~GY~~~~~~~~~~ 128 (342)
..||||||++.++.++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ..+||+...... ..
T Consensus 25 ~~iPvIDls~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~e~K~~~~~~--~~~Gy~~~~~~~-~~ 101 (335)
T PLN02156 25 VLIPVIDLTDSDAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKAGPP--DPFGYGTKRIGP-NG 101 (335)
T ss_pred CCCCcccCCChHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhcCCC--CCcccCccccCC-CC
Confidence 469999999888889999999999999999999999999999999999999999999998633 345886533221 23
Q ss_pred CCcccccceeccCCccc---cccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh-hhhhhhhccC--Cccc
Q 043251 129 KYMWHEGFTIMGTSIHD---HAKQLWPHNHAKFCDVMETYQKKMNILADQLTQLIFKSLDISE-EQAEEMNWVG--SSSA 202 (342)
Q Consensus 129 ~~d~~E~~~~~~~~~~~---~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~-~~~~~~~~~~--~~~~ 202 (342)
..+|+|.|.+.. .+.. ...|.||..++.||+.+++|+++|.+|+.+|+++|+++||+++ ++|.+ .+.. ..+.
T Consensus 102 ~~~~~e~~~~~~-~~~~~~~~~~~~wp~~p~~fr~~~~~Y~~~~~~L~~~ll~~la~~LGl~~~~~f~~-~~~~~~~~~~ 179 (335)
T PLN02156 102 DVGWLEYILLNA-NLCLESHKTTAVFRHTPAIFREAVEEYMKEMKRMSSKVLEMVEEELKIEPKEKLSK-LVKVKESDSC 179 (335)
T ss_pred CCCceeeEeeec-CCccccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCcHHHHHH-HhcCCCccce
Confidence 458999998865 2221 2468899988899999999999999999999999999999964 56652 2222 2578
Q ss_pred eeccccCCCCCc--cCCccccCCCCCCceEEEeeCCCCceeEEecCCceEEecCCCCcEEEEccchhhhhhCCccCCccc
Q 043251 203 LQLNSYPSCPEP--NRAVGLAPHTDTSLITILHENSIAGLQIFKQEVGWVSVKPVDGALVVNVGDLFHILSNARFPNVLH 280 (342)
Q Consensus 203 lrl~~YP~~~~~--~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~~H 280 (342)
||++|||+|+.. +..+|+++|||+|+||||+||+++||||+..+|+|++|+|.||++||||||+||+||||+|||+.|
T Consensus 180 lRl~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~~g~Wi~Vpp~pga~VVNiGD~l~~wTNg~~kSt~H 259 (335)
T PLN02156 180 LRMNHYPEKEETPEKVEIGFGEHTDPQLISLLRSNDTAGLQICVKDGTWVDVPPDHSSFFVLVGDTLQVMTNGRFKSVKH 259 (335)
T ss_pred EeEEeCCCCCCCccccccCCCCccCCCceEEEEeCCCCceEEEeCCCCEEEccCCCCcEEEEhHHHHHHHhCCeeeccce
Confidence 999999999853 357899999999999999999999999987777999999999999999999999999999999999
Q ss_pred ccccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCCcCCccHHHHHHHHHhChh
Q 043251 281 RVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVARYRPVTVKEFISLKAKSPE 334 (342)
Q Consensus 281 RV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~y~~~t~~e~~~~~~~~~~ 334 (342)
||+.+...+||||+||++|+.|++|.|++++ ++|++|++++++||+..+..+..
T Consensus 260 RVv~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~ey~~~~~~~~~ 316 (335)
T PLN02156 260 RVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEFTWSQYKLSAYKTKL 316 (335)
T ss_pred eeecCCCCCEEEEEEeecCCCCCEEeCChHhcCCCCCccCCCccHHHHHHHHHhccC
Confidence 9998888899999999999999999999988 67899999999999998876544
No 20
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=100.00 E-value=7.9e-71 Score=519.66 Aligned_cols=285 Identities=36% Similarity=0.722 Sum_probs=255.1
Q ss_pred CCCCceeeCCC--------hHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhccCCCCccccc
Q 043251 48 KISVPVIDLRD--------PRVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSLPSRQKLKALRAPAGATGYG 119 (342)
Q Consensus 48 ~~~iPvIDls~--------~~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~GY~ 119 (342)
..+||+|||+. ..++++|++||++||||||+|||||.++++++++.+++||+||.|+|+++......+.||+
T Consensus 15 ~~~iPvIDls~~~~~~~~~~~~~~~i~~Ace~wGfFqviNHGI~~~l~~~~~~~~~~fF~lP~eeK~k~~~~~~~~~gY~ 94 (322)
T KOG0143|consen 15 ELDIPVIDLSCLDSDDPGREEVVEKLREACEEWGFFQVINHGISLELLDKVKEASKEFFELPLEEKLKVASEPGKYRGYG 94 (322)
T ss_pred CCCcCeEECCCCCCcchhHHHHHHHHHHHHHHCCeeEEEcCCCCHHHHHHHHHHHHHHhcCCHHHHHhhccCCCCccccc
Confidence 56899999993 3467899999999999999999999999999999999999999999999987665679998
Q ss_pred cccccCCCCCCcccccceeccCCcc-ccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhhhhccC
Q 043251 120 IARITPFFDKYMWHEGFTIMGTSIH-DHAKQLWPHNHAKFCDVMETYQKKMNILADQLTQLIFKSLDISEEQAEEMNWVG 198 (342)
Q Consensus 120 ~~~~~~~~~~~d~~E~~~~~~~~~~-~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~ 198 (342)
...........+|.|.+.+.. .|. ....+.||+.++.||+++++|.+++.+|+..|+++|+++||+..+++. ...+
T Consensus 95 ~~~~~~~~~~~~w~d~~~~~~-~p~~~~~~~~wp~~p~~~re~~~eY~~~~~~L~~~l~~~l~eslgl~~~~~~--~~~~ 171 (322)
T KOG0143|consen 95 TSFILSPLKELDWRDYLTLLS-APESSFDPNLWPEGPPEFRETMEEYAKEVMELSEKLLRLLSESLGLEPEYLE--KLFG 171 (322)
T ss_pred ccccccccccccchhheeeec-cCccccCcccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH--HhhC
Confidence 776554445788999998765 454 357789999999999999999999999999999999999999875554 3333
Q ss_pred C--ccceeccccCCCCCccCCccccCCCCCCceEEEeeC-CCCceeEEecCCceEEecCCCCcEEEEccchhhhhhCCcc
Q 043251 199 S--SSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHEN-SIAGLQIFKQEVGWVSVKPVDGALVVNVGDLFHILSNARF 275 (342)
Q Consensus 199 ~--~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~~g~~vVniGd~L~~~TnG~~ 275 (342)
. ...||++|||+||+++.++|+++|||.|+||+|+|| +++||||...+|+|++|+|.||++||||||+||+||||+|
T Consensus 172 ~~~~~~~r~n~Yp~cp~pe~~lGl~~HtD~~~lTiLlqd~~V~GLQv~~~dg~Wi~V~P~p~a~vVNiGD~l~~lSNG~y 251 (322)
T KOG0143|consen 172 ETGGQVMRLNYYPPCPEPELTLGLGAHTDKSFLTILLQDDDVGGLQVFTKDGKWIDVPPIPGAFVVNIGDMLQILSNGRY 251 (322)
T ss_pred CccceEEEEeecCCCcCccccccccCccCcCceEEEEccCCcCceEEEecCCeEEECCCCCCCEEEEcccHHhHhhCCcc
Confidence 3 669999999999999999999999999999999998 8999999964569999999999999999999999999999
Q ss_pred CCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC--CCCCCcCCccHHHHHHHHHhChhh
Q 043251 276 PNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS--GQVARYRPVTVKEFISLKAKSPEK 335 (342)
Q Consensus 276 ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~--~~p~~y~~~t~~e~~~~~~~~~~~ 335 (342)
||++|||++++.++|+|+|+|+.|..+++|.|++++ +.|++|+++++.+|++.+......
T Consensus 252 kSv~HRV~~n~~~~R~Sia~F~~p~~d~~i~p~~elv~~~~~~Y~~~~~~~y~~~~~~~~~~ 313 (322)
T KOG0143|consen 252 KSVLHRVVVNGEKERISVAFFVFPPLDKVIGPPEELVDEEPPKYKPFTFGDYLEFYFSKKLQ 313 (322)
T ss_pred cceEEEEEeCCCCceEEEEEEecCCCCceecChhhhCCCCCCccCcEEHHHHHHHHHhcccc
Confidence 999999999998889999999999999999999998 448889999999999988765543
No 21
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=100.00 E-value=2.5e-70 Score=517.51 Aligned_cols=277 Identities=27% Similarity=0.550 Sum_probs=241.5
Q ss_pred CCCCceeeCCCh------HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhccCCCCccccccc
Q 043251 48 KISVPVIDLRDP------RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSLPSRQKLKALRAPAGATGYGIA 121 (342)
Q Consensus 48 ~~~iPvIDls~~------~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~GY~~~ 121 (342)
..+||+|||+.. +++++|++||++||||||+|||||.++++++++++++||+||.|+|+++... .+||...
T Consensus 4 ~~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGI~~~l~~~~~~~~~~fF~LP~e~K~~~~~~---~~gy~~~ 80 (321)
T PLN02299 4 MESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCMEQRFKEMVA---SKGLEGV 80 (321)
T ss_pred CCCCCEEECcCCCcccHHHHHHHHHHHHHhcCEEEEECCCCCHHHHHHHHHHHHHHhCCCHHHHHhcccC---CCCcccc
Confidence 567999999842 4788999999999999999999999999999999999999999999997543 3566443
Q ss_pred cccCCCCCCcccccceeccCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhhhhccC---
Q 043251 122 RITPFFDKYMWHEGFTIMGTSIHDHAKQLWPHNHAKFCDVMETYQKKMNILADQLTQLIFKSLDISEEQAEEMNWVG--- 198 (342)
Q Consensus 122 ~~~~~~~~~d~~E~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~--- 198 (342)
..+ ....||+|.|.+.. .|. ...+.||+.+++||+.+++|++.|.+|+.+|+++|+++||+++++|.+ .+.+
T Consensus 81 ~~~--~~~~d~ke~~~~~~-~~~-~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~-~~~~~~~ 155 (321)
T PLN02299 81 QTE--VEDLDWESTFFLRH-LPE-SNLADIPDLDDEYRKVMKDFALELEKLAEELLDLLCENLGLEKGYLKK-AFHGSKG 155 (321)
T ss_pred ccc--CCCcCHHHHccccc-CCc-cccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HhcCCCC
Confidence 222 23568999998753 332 235779998899999999999999999999999999999999888863 3322
Q ss_pred CccceeccccCCCCCccCCccccCCCCCCceEEEeeC-CCCceeEEecCCceEEecCCCCcEEEEccchhhhhhCCccCC
Q 043251 199 SSSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHEN-SIAGLQIFKQEVGWVSVKPVDGALVVNVGDLFHILSNARFPN 277 (342)
Q Consensus 199 ~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks 277 (342)
..+.||++|||||+.++...|+++|||+|+||||+|+ +++||||+. +|+|++|+|.||++||||||+||+||||+|||
T Consensus 156 ~~~~lRl~~YPp~~~~~~~~G~~~HTD~g~lTlL~qd~~v~GLQV~~-~g~Wi~V~p~pg~lvVNiGD~l~~~Tng~~kS 234 (321)
T PLN02299 156 PTFGTKVSNYPPCPKPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLK-DGEWVDVPPMRHSIVVNLGDQLEVITNGKYKS 234 (321)
T ss_pred ccceeeeEecCCCCCcccccCccCccCCCeEEEEEecCCCCCcCccc-CCeEEECCCCCCeEEEEeCHHHHHHhCCceec
Confidence 3567999999999988888899999999999999997 599999985 56999999999999999999999999999999
Q ss_pred cccccccCCCCCeeEEEEeeCCCCCCeEecCCCC---C--CCCCcCCccHHHHHHHHHhCh
Q 043251 278 VLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---G--QVARYRPVTVKEFISLKAKSP 333 (342)
Q Consensus 278 ~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~--~p~~y~~~t~~e~~~~~~~~~ 333 (342)
+.|||+.+...+|||++||++|+.|++|+|++++ + +|++|++++++||++.+.++.
T Consensus 235 ~~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~~~~~~ 295 (321)
T PLN02299 235 VMHRVVAQTDGNRMSIASFYNPGSDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGLK 295 (321)
T ss_pred ccceeecCCCCCEEEEEEEecCCCCceEeCchHhcCcccCCCcCCCCCcHHHHHHHHHHcc
Confidence 9999998888899999999999999999999988 2 478999999999999877644
No 22
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=100.00 E-value=2.9e-70 Score=495.42 Aligned_cols=270 Identities=30% Similarity=0.504 Sum_probs=244.5
Q ss_pred CCCCceeeCCCh---------HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhccCCC-Cccc
Q 043251 48 KISVPVIDLRDP---------RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSLPSRQKLKALRAPA-GATG 117 (342)
Q Consensus 48 ~~~iPvIDls~~---------~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~-~~~G 117 (342)
+..||+|||+.. ..+++|++||+++|||||+||||+.++++++++++++||+||.|+|+++.+... .++|
T Consensus 3 ~~~lp~idls~~~~~~~~~~~~~~~~l~~A~r~~GFf~l~~~~i~~~~~~~~~~~arqFFaLp~eeK~~~~~~~~~~~rG 82 (322)
T COG3491 3 TRDLPIIDLSELAGSDPGARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALARQFFALPVEEKLKILMVLGRQHRG 82 (322)
T ss_pred CCcCceeccHHhcCCCcHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCccccc
Confidence 467999999831 478999999999999999999999999999999999999999999999986543 6899
Q ss_pred cccccccCCCCCCcccccceeccCCcc----------ccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 043251 118 YGIARITPFFDKYMWHEGFTIMGTSIH----------DHAKQLWPHNHAKFCDVMETYQKKMNILADQLTQLIFKSLDIS 187 (342)
Q Consensus 118 Y~~~~~~~~~~~~d~~E~~~~~~~~~~----------~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~ 187 (342)
|...+.+...+..||+|.++++.+.+. ...+|.|| ..++||+.+..|+++|.+++.+||++||.+|+|+
T Consensus 83 Y~~~~~E~t~g~~d~kE~~d~g~~~~~~~~~~~~~~~~~gpN~wP-~ip~~r~~ll~~~~~~~~~~~rLL~aiA~~LdL~ 161 (322)
T COG3491 83 YTPHGGELTDGEPDYKEGLDMGPDLDAELAGVRAGTPLHGPNLWP-AIPGLRDALLQYYRAMTAVGLRLLRAIALGLDLP 161 (322)
T ss_pred cccCcccccCCccchhhhcccccccccccCCCccCCCcCCCCCCc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999888888888899999999875431 14789999 8999999999999999999999999999999999
Q ss_pred hhhhhhhhccCCccceeccccCCCCCccCCccccCCCCCCceEEEeeCCCCceeEEecCCceEEecCCCCcEEEEccchh
Q 043251 188 EEQAEEMNWVGSSSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHENSIAGLQIFKQEVGWVSVKPVDGALVVNVGDLF 267 (342)
Q Consensus 188 ~~~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~~g~~vVniGd~L 267 (342)
++.|.. .+.++.+++|+++||+.+......|.|+|||+|+||||+||+++||||+.+.|+|++|+|.||++||||||+|
T Consensus 162 ~d~Fd~-~~~d~~~~~RLlrYP~~~~~~~~~~~GaHtD~G~lTLl~Qd~~~GLqv~~~~g~Wl~v~P~pgtlvVNiGdmL 240 (322)
T COG3491 162 EDFFDK-RTSDPNSVLRLLRYPSRPAREGADGVGAHTDYGLLTLLFQDDVGGLEVRPPNGGWLDVPPIPGTLVVNIGDML 240 (322)
T ss_pred hhhhhh-ccCCchheEEEEecCCCcccccccccccccCCCeEEEEEecccCCeEEecCCCCeeECCCCCCeEEEeHHHHH
Confidence 998874 4445599999999999998888888999999999999999999999999998899999999999999999999
Q ss_pred hhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC----CCCCCcCC
Q 043251 268 HILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS----GQVARYRP 319 (342)
Q Consensus 268 ~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~----~~p~~y~~ 319 (342)
|+||||+|+||+|||+.|++.+||||+||+.|+.|+.|.|+.++ ..++++..
T Consensus 241 e~~Tng~lrST~HRV~~~~~~~R~SipfF~~p~~Da~I~Pl~~l~~~~a~~~~~~~ 296 (322)
T COG3491 241 ERWTNGRLRSTVHRVRNPPGVDRYSIPFFLEPNFDAEIAPLLPLCPEAANEPRGPG 296 (322)
T ss_pred HHHhCCeeccccceeecCCCccceeeeeeccCCCCccccccCCCCcccccCCcCCC
Confidence 99999999999999999988899999999999999999987755 45556555
No 23
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=100.00 E-value=1.4e-69 Score=508.75 Aligned_cols=276 Identities=27% Similarity=0.484 Sum_probs=238.2
Q ss_pred CCCceeeCCCh-HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhccCCCCccccccccccCCC
Q 043251 49 ISVPVIDLRDP-RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSLPSRQKLKALRAPAGATGYGIARITPFF 127 (342)
Q Consensus 49 ~~iPvIDls~~-~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~GY~~~~~~~~~ 127 (342)
..||||||+.. +.+++|++||++||||||+||||+.++++++++++++||+||.|+|+++... ...+||...+.
T Consensus 4 ~~iPvIDls~~~~~~~~l~~Ac~~~GfF~l~nHGi~~~l~~~~~~~~~~FF~LP~e~K~~~~~~-~~~~GY~~~~~---- 78 (300)
T PLN02365 4 VNIPTIDLEEFPGQIEKLREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRRNTDV-ILGSGYMAPSE---- 78 (300)
T ss_pred CCCCEEEChhhHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhccCC-CCCCCCCCcCC----
Confidence 46999999975 3568999999999999999999999999999999999999999999996532 23579975432
Q ss_pred CCCcccccceeccCCccccccCCCCC---CchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ChhhhhhhhccCCccce
Q 043251 128 DKYMWHEGFTIMGTSIHDHAKQLWPH---NHAKFCDVMETYQKKMNILADQLTQLIFKSLDI-SEEQAEEMNWVGSSSAL 203 (342)
Q Consensus 128 ~~~d~~E~~~~~~~~~~~~~~~~wP~---~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl-~~~~~~~~~~~~~~~~l 203 (342)
..+++|.|.+.. .......+.||. .+++||+.+++|+++|.+|+.+|+++|+++||+ ++++|. .. .+.|
T Consensus 79 -~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~f~--~~---~~~l 151 (300)
T PLN02365 79 -VNPLYEALGLYD-MASPQAVDTFCSQLDASPHQRETIKKYAKAIHDLAMDLARKLAESLGLVEGDFFQ--GW---PSQF 151 (300)
T ss_pred -CCCchhheeccc-ccCchhhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHh--hc---ccce
Confidence 236788887653 111112234442 457899999999999999999999999999999 777775 22 4789
Q ss_pred eccccCCCCCccCCccccCCCCCCceEEEeeC-CCCceeEEec-CCceEEecCCCCcEEEEccchhhhhhCCccCCcccc
Q 043251 204 QLNSYPSCPEPNRAVGLAPHTDTSLITILHEN-SIAGLQIFKQ-EVGWVSVKPVDGALVVNVGDLFHILSNARFPNVLHR 281 (342)
Q Consensus 204 rl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~-~g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~~HR 281 (342)
|++|||+++.++...|+++|||+|+||||+|| +++||||+++ +|+|++|+|.||++|||+||+||+||||+|||++||
T Consensus 152 r~~~YP~~p~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~~~g~Wi~V~p~pga~vVNiGD~l~~~TNG~~~St~HR 231 (300)
T PLN02365 152 RINKYNFTPETVGSSGVQIHTDSGFLTILQDDENVGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGRLCNVKHR 231 (300)
T ss_pred eeeecCCCCCccccccccCccCCCceEEEecCCCcCceEEEECCCCeEEecCCCCCeEEEEhhHHHHHHhCCceecccce
Confidence 99999999988888999999999999999998 4999999987 679999999999999999999999999999999999
Q ss_pred cccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCCcCCccHHHHHHHHHhChhhh
Q 043251 282 VSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVARYRPVTVKEFISLKAKSPEKA 336 (342)
Q Consensus 282 V~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~y~~~t~~e~~~~~~~~~~~~ 336 (342)
|+.++..+||||+||+.|+.|++|.|++++ ++|++|++++++||+..+.+...+.
T Consensus 232 Vv~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~~ 289 (300)
T PLN02365 232 VQCKEATMRISIASFLLGPKDDDVEAPPEFVDAEHPRLYKPFTYEDYRKLRLSTKLHA 289 (300)
T ss_pred eEcCCCCCEEEEEEEecCCCCCeEeCCHHHcCCCCCccCCCccHHHHHHHHHhccccc
Confidence 998887899999999999999999999887 6789999999999999988766543
No 24
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.1e-67 Score=499.23 Aligned_cols=276 Identities=31% Similarity=0.549 Sum_probs=228.7
Q ss_pred CCCCceeeCCChHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcc-C-CC-Cccccc---cc
Q 043251 48 KISVPVIDLRDPRVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSLPSRQKLKALR-A-PA-GATGYG---IA 121 (342)
Q Consensus 48 ~~~iPvIDls~~~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~-~-~~-~~~GY~---~~ 121 (342)
...||+|||+... +++|++||++||||||+|||||.++++++++.+++||+||.|+|+++.. . +. ...||. ..
T Consensus 36 ~~~IPvIDls~~~-~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~s~~FF~LP~eeK~k~~~~~~~~~~~~g~~~~~~~ 114 (341)
T PLN02984 36 DIDIPVIDMECLD-MEKLREACKDWGIFRLENHGIPLTLMSQLKEISESLLSLPFESKRELFGVNSPLSYFWGTPALTPS 114 (341)
T ss_pred cCCCCeEeCcHHH-HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhhcccCCCCccccCccccccc
Confidence 4569999998663 5899999999999999999999999999999999999999999999852 1 11 122332 11
Q ss_pred cccCC----CCCCcccccceeccCCccccccCCC--CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--hhhhhh
Q 043251 122 RITPF----FDKYMWHEGFTIMGTSIHDHAKQLW--PHNHAKFCDVMETYQKKMNILADQLTQLIFKSLDIS--EEQAEE 193 (342)
Q Consensus 122 ~~~~~----~~~~d~~E~~~~~~~~~~~~~~~~w--P~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~--~~~~~~ 193 (342)
+.+.. ....||+|.|.++. .+.....+.| |...++||+++++|+++|.+|+.+|+++||++||++ +++|.+
T Consensus 115 ~~~~~~~~~~~~~D~kE~f~~~~-~~~~~~~~~p~~~~~~p~fr~~~~~y~~~~~~La~~ll~~lA~~Lgl~~~~~~f~~ 193 (341)
T PLN02984 115 GKALSRGPQESNVNWVEGFNIPL-SSLSLLQTLSCSDPKLESFRVLMEEYGKHLTRIAVTLFEAIAKTLSLELSGDQKMS 193 (341)
T ss_pred ccccccccccCCCCeeeEEeCcC-CchhhhhhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHH
Confidence 11110 12469999999875 2211111212 234579999999999999999999999999999999 888763
Q ss_pred hhccCCccceeccccCCCCCccCCccccCCCCCCceEEEeeCCCCceeEEecCCceEEecCCCCcEEEEccchhhhhhCC
Q 043251 194 MNWVGSSSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHENSIAGLQIFKQEVGWVSVKPVDGALVVNVGDLFHILSNA 273 (342)
Q Consensus 194 ~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~~g~~vVniGd~L~~~TnG 273 (342)
.+..+.+.||++|||+|+.++..+|+++|||+|+||||+||+++||||+. +|+|++|+|.||++|||+||+||+||||
T Consensus 194 -~~~~~~~~lRl~~YPp~~~~~~~~g~~aHTD~g~lTlL~Qd~v~GLQV~~-~g~Wv~V~p~pgalVVNiGD~Le~wTNg 271 (341)
T PLN02984 194 -YLSESTGVIRVYRYPQCSNEAEAPGMEVHTDSSVISILNQDEVGGLEVMK-DGEWFNVKPIANTLVVNLGDMMQVISDD 271 (341)
T ss_pred -HhcCccceEEEEeCCCCCCcccccCccCccCCCceEEEEeCCCCCeeEee-CCceEECCCCCCeEEEECChhhhhhcCC
Confidence 33344789999999999988788999999999999999999999999985 4699999999999999999999999999
Q ss_pred ccCCcccccc-cCCCCCeeEEEEeeCCCCCCeEecCCCCCCCCCcCCccHHHHHHHHHhChh
Q 043251 274 RFPNVLHRVS-VNQKRQRLSLAYFYNPPTDSTVVPIVKSGQVARYRPVTVKEFISLKAKSPE 334 (342)
Q Consensus 274 ~~ks~~HRV~-~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~p~~y~~~t~~e~~~~~~~~~~ 334 (342)
+|||++|||+ .+...+|||++||++|+.|++|.| ++|++++++||+..+...+.
T Consensus 272 ~~kSt~HRVv~~~~~~~R~Sia~F~~P~~d~~i~p-------~~y~p~t~~e~l~~~~~~~~ 326 (341)
T PLN02984 272 EYKSVLHRVGKRNKKKERYSICYFVFPEEDCVIKS-------SKYKPFTYSDFEAQVQLDVK 326 (341)
T ss_pred eeeCCCCccccCCCCCCeEEEEEEecCCCCCEEcc-------CCcCcccHHHHHHHHHhhhh
Confidence 9999999996 455678999999999999999974 58999999999998875554
No 25
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=100.00 E-value=1.1e-66 Score=488.29 Aligned_cols=268 Identities=28% Similarity=0.530 Sum_probs=228.2
Q ss_pred CCceeeCCCh------HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhccCCCCccccccccc
Q 043251 50 SVPVIDLRDP------RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSLPSRQKLKALRAPAGATGYGIARI 123 (342)
Q Consensus 50 ~iPvIDls~~------~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~GY~~~~~ 123 (342)
+||||||+.. +++++|++||++||||||+||||+.++++++++.+++||+||.++|.. .... ..++...
T Consensus 2 ~iPvIDls~~~~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~~~~~~~FF~LP~e~k~~-~~~~--~~~~~~~-- 76 (303)
T PLN02403 2 EIPVIDFDQLDGEKRSKTMSLLHQACEKWGFFQVENHGIDKKLMEKVKQLVNSHYEENLKESFY-ESEI--AKALDNE-- 76 (303)
T ss_pred CCCeEeCccCCcccHHHHHHHHHHHHHhCceEEEECCCCCHHHHHHHHHHHHHHhcCCHHHHhh-cccc--cCccccc--
Confidence 6999999842 478899999999999999999999999999999999999999999962 2111 1122111
Q ss_pred cCCCCCCcccccceeccCCccccccCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhhhhccC---Cc
Q 043251 124 TPFFDKYMWHEGFTIMGTSIHDHAKQLWPHNHAKFCDVMETYQKKMNILADQLTQLIFKSLDISEEQAEEMNWVG---SS 200 (342)
Q Consensus 124 ~~~~~~~d~~E~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~---~~ 200 (342)
...+..||+|.|.++. .|. ...|.||+.+++||+++++|+++|.+|+.+|+++|+++||+++++|.+ .+.. ..
T Consensus 77 -~~~~~~d~kE~~~~~~-~p~-~~~~~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~-~~~~~~~~~ 152 (303)
T PLN02403 77 -GKTSDVDWESSFFIWH-RPT-SNINEIPNLSEDLRKTMDEYIAQLIKLAEKLSELMSENLGLDKDYIKE-AFSGNKGPS 152 (303)
T ss_pred -CCCCCccHhhhccccc-CCc-cchhhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HhccCCCcc
Confidence 1123568999999865 343 245789988899999999999999999999999999999999988863 3332 24
Q ss_pred cceeccccCCCCCccCCccccCCCCCCceEEEeeC-CCCceeEEecCCceEEecCCC-CcEEEEccchhhhhhCCccCCc
Q 043251 201 SALQLNSYPSCPEPNRAVGLAPHTDTSLITILHEN-SIAGLQIFKQEVGWVSVKPVD-GALVVNVGDLFHILSNARFPNV 278 (342)
Q Consensus 201 ~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~~-g~~vVniGd~L~~~TnG~~ks~ 278 (342)
+.+|++|||+++.++...|+++|||+|+||||+|+ +++||||+. +|+|++|+|.| |++||||||+||+||||+|||+
T Consensus 153 ~~lrl~~YP~~~~~~~~~G~~~HtD~g~lTlL~q~~~v~GLqV~~-~g~Wi~V~p~p~~~lvVNvGD~L~~~Tng~~~S~ 231 (303)
T PLN02403 153 VGTKVAKYPECPRPELVRGLREHTDAGGIILLLQDDQVPGLEFLK-DGKWVPIPPSKNNTIFVNTGDQLEVLSNGRYKST 231 (303)
T ss_pred ceeeeEcCCCCCCcccccCccCccCCCeEEEEEecCCCCceEecc-CCeEEECCCCCCCEEEEEehHHHHHHhCCeeecc
Confidence 56999999999988777899999999999999997 599999975 56999999999 6999999999999999999999
Q ss_pred ccccccCCCCCeeEEEEeeCCCCCCeEecCCCCCCCCCcC-CccHHHHHHHHHh
Q 043251 279 LHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKSGQVARYR-PVTVKEFISLKAK 331 (342)
Q Consensus 279 ~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~p~~y~-~~t~~e~~~~~~~ 331 (342)
+|||+.+..++|||++||++|+.|++|.|++++ .|+ +++++||++.+..
T Consensus 232 ~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~----~~~~~~~~~eyl~~~~~ 281 (303)
T PLN02403 232 LHRVMADKNGSRLSIATFYNPAGDAIISPAPKL----LYPSNYRFQDYLKLYST 281 (303)
T ss_pred cceeecCCCCCEEEEEEEEcCCCCCeEeCchhh----CCCCCccHHHHHHHHHH
Confidence 999998888899999999999999999999886 345 4999999988764
No 26
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=100.00 E-value=3.2e-60 Score=436.05 Aligned_cols=242 Identities=25% Similarity=0.439 Sum_probs=210.0
Q ss_pred HHHHHHhcC-CCHHHHhhhccCCC--CccccccccccC--CCCCCcccccceeccCCcc-ccccCCCCCCchhhHHHHHH
Q 043251 91 ESEARRLFS-LPSRQKLKALRAPA--GATGYGIARITP--FFDKYMWHEGFTIMGTSIH-DHAKQLWPHNHAKFCDVMET 164 (342)
Q Consensus 91 ~~~~~~fF~-lP~e~K~~~~~~~~--~~~GY~~~~~~~--~~~~~d~~E~~~~~~~~~~-~~~~~~wP~~~~~fr~~~~~ 164 (342)
.+.+++||+ ||.|+|+++....+ .++||+...... .....||+|.|.+.. .|. ...+|.||+.+++|++++++
T Consensus 2 ~~~~~~FF~~LP~eeK~~~~~~~~~~~~~GY~~~~~~~~~~~~~~d~kE~~~~~~-~p~~~~~~n~wP~~~~~f~~~~~~ 80 (262)
T PLN03001 2 RSLGLSFFKDSPMEEKLRYACDPGSAASEGYGSRMLLGAKDDTVLDWRDFFDHHT-FPLSRRNPSHWPDFPPDYREVVGE 80 (262)
T ss_pred hHHHHHHHhhCCHHHHHHhhcCCCCCCccccccccccccCCCCccCchheeEeee-cCccccchhhCCCCcHHHHHHHHH
Confidence 467899997 99999999876532 478996543321 223569999999854 343 24579999988999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChhhhhhhhccCCccceeccccCCCCCccCCccccCCCCCCceEEEeeCCCCceeEEe
Q 043251 165 YQKKMNILADQLTQLIFKSLDISEEQAEEMNWVGSSSALQLNSYPSCPEPNRAVGLAPHTDTSLITILHENSIAGLQIFK 244 (342)
Q Consensus 165 y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~ 244 (342)
|+++|.+|+.+|+++|+++||+++++|.+ .+....+.+|++|||+|+.++..+|+++|||+|+||||+||+++||||+.
T Consensus 81 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~-~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~ 159 (262)
T PLN03001 81 YGDCMKALAQKLLAFISESLGLPCSCIED-AVGDFYQNITVSYYPPCPQPELTLGLQSHSDFGAITLLIQDDVEGLQLLK 159 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HhcCcchhheeecCCCCCCcccccCCcCCcCCCeeEEEEeCCCCceEEee
Confidence 99999999999999999999999988863 33334678999999999988889999999999999999999999999986
Q ss_pred cCCceEEecCCCCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeCCCCCCeEecCCCC---CCCCCcCCcc
Q 043251 245 QEVGWVSVKPVDGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYNPPTDSTVVPIVKS---GQVARYRPVT 321 (342)
Q Consensus 245 ~~g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~---~~p~~y~~~t 321 (342)
+ |+|++|+|.||++||||||+||+||||+|||++|||+.+..++||||+||++|+.|++|+|++++ ++|++|++++
T Consensus 160 ~-g~Wi~V~p~p~a~vVNiGD~l~~~tng~~~S~~HRVv~~~~~~R~Sia~F~~p~~d~~i~p~~e~v~~~~p~~y~~~~ 238 (262)
T PLN03001 160 D-AEWLMVPPISDAILIIIADQTEIITNGNYKSAQHRAIANANKARLSVATFHDPAKTAKIAPASALSTESFPPRYCEIV 238 (262)
T ss_pred C-CeEEECCCCCCcEEEEccHHHHHHhCCccccccceEEcCCCCCEEEEEEEEcCCCCCEEeCChHhcCCCCCCcCCCcc
Confidence 4 59999999999999999999999999999999999998888899999999999999999999988 5789999999
Q ss_pred HHHHHHHHHhChhh
Q 043251 322 VKEFISLKAKSPEK 335 (342)
Q Consensus 322 ~~e~~~~~~~~~~~ 335 (342)
++||+..+.++..+
T Consensus 239 ~~e~l~~~~~~~~~ 252 (262)
T PLN03001 239 YGEYVSSWYSKGPE 252 (262)
T ss_pred HHHHHHHHHHhccC
Confidence 99999888775543
No 27
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.91 E-value=4.2e-25 Score=173.72 Aligned_cols=95 Identities=45% Similarity=0.874 Sum_probs=75.9
Q ss_pred cceeccccCCCCCccCCccccCCCCC--CceEEEeeCCCCceeEEecCCceEEecCCCCcEEEEccchhhhhhCCccCCc
Q 043251 201 SALQLNSYPSCPEPNRAVGLAPHTDT--SLITILHENSIAGLQIFKQEVGWVSVKPVDGALVVNVGDLFHILSNARFPNV 278 (342)
Q Consensus 201 ~~lrl~~YP~~~~~~~~~g~~~HtD~--g~lTlL~qd~~~GLqV~~~~g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~ 278 (342)
+.+|+++||+ ++...|+++|+|. +++|+|+|++++||||..++ +|+.|++.++.++||+||+|++||||.++|+
T Consensus 2 ~~~~~~~Y~~---~~~~~~~~~H~D~~~~~~Til~~~~~~gL~~~~~~-~~~~v~~~~~~~~v~~G~~l~~~t~g~~~~~ 77 (98)
T PF03171_consen 2 SQLRLNRYPP---PENGVGIGPHTDDEDGLLTILFQDEVGGLQVRDDG-EWVDVPPPPGGFIVNFGDALEILTNGRYPAT 77 (98)
T ss_dssp -EEEEEEE-S---CCGCEEEEEEEES--SSEEEEEETSTS-EEEEETT-EEEE----TTCEEEEEBHHHHHHTTTSS---
T ss_pred CEEEEEECCC---cccCCceeCCCcCCCCeEEEEecccchheeccccc-cccCccCccceeeeeceeeeecccCCccCCc
Confidence 4689999998 5567799999999 99999999999999999987 9999999999999999999999999999999
Q ss_pred ccccccCCCCCeeEEEEeeCC
Q 043251 279 LHRVSVNQKRQRLSLAYFYNP 299 (342)
Q Consensus 279 ~HRV~~~~~~~R~Si~~F~~P 299 (342)
.|||+.+..+.|+|++||++|
T Consensus 78 ~HrV~~~~~~~R~s~~~f~~p 98 (98)
T PF03171_consen 78 LHRVVPPTEGERYSLTFFLRP 98 (98)
T ss_dssp -EEEE--STS-EEEEEEEEE-
T ss_pred eeeeEcCCCCCEEEEEEEECC
Confidence 999998888899999999988
No 28
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.90 E-value=7.1e-24 Score=171.84 Aligned_cols=103 Identities=36% Similarity=0.647 Sum_probs=85.3
Q ss_pred CceeeCC-C----hHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhccCCCCccccccccccC
Q 043251 51 VPVIDLR-D----PRVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSLPSRQKLKALRAPAGATGYGIARITP 125 (342)
Q Consensus 51 iPvIDls-~----~~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~GY~~~~~~~ 125 (342)
||||||+ + .+++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++.+. ..++||.+.+.+.
T Consensus 1 iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy~~~~~~~ 79 (116)
T PF14226_consen 1 IPVIDLSPDPADREEVAEQLRDACEEWGFFYLVNHGIPQELIDRVFAAAREFFALPLEEKQKYARS-PSYRGYSPPGSES 79 (116)
T ss_dssp --EEEHGGCHHHHHHHHHHHHHHHHHTSEEEEESSSSSHHHHHHHHHHHHHHHCSHHHHHHHHBCC-TTCSEEEESEEEC
T ss_pred CCeEECCCCCccHHHHHHHHHHHHHhCCEEEEecccccchhhHHHHHHHHHHHHhhHHHHHHhcCC-CCCcccccCCccc
Confidence 7999999 2 36889999999999999999999999999999999999999999999999654 4789999887766
Q ss_pred CCC-CCcccccceeccCCccc-------cccCCCCCC
Q 043251 126 FFD-KYMWHEGFTIMGTSIHD-------HAKQLWPHN 154 (342)
Q Consensus 126 ~~~-~~d~~E~~~~~~~~~~~-------~~~~~wP~~ 154 (342)
..+ ..||+|+|.++.+.+.+ ..+|.||++
T Consensus 80 ~~~~~~d~~E~~~~~~~~~~~~p~~~~~~~~n~WP~~ 116 (116)
T PF14226_consen 80 TDGGKPDWKESFNIGPDLPEDDPAYPPLYGPNIWPDE 116 (116)
T ss_dssp CTTCCCCSEEEEEEECC-STTCHHTGCTS-GGGS-TT
T ss_pred cCCCCCCceEEeEEECCCCccccccccccCCCCCCCC
Confidence 655 88999999998743332 678999963
No 29
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=99.81 E-value=7.1e-20 Score=148.93 Aligned_cols=92 Identities=25% Similarity=0.450 Sum_probs=80.1
Q ss_pred CCCCCCCcCCCCCCCCC----CCCCCceeeCCCh--------HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHh
Q 043251 30 CSLPESHKWPKFDDLYD----NKISVPVIDLRDP--------RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRL 97 (342)
Q Consensus 30 ~~~p~~~~~~~~~~~~~----~~~~iPvIDls~~--------~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~f 97 (342)
.++|..|+++..++|.. ....||||||+.. +++++|++||++||||||+||||+.++++++++.+++|
T Consensus 13 ~~~p~~~~~~~~~~p~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~L~~A~~~~GFf~l~nhGi~~elid~~~~~~~~F 92 (120)
T PLN03176 13 KTLQASFVRDEDERPKVAYNQFSNEIPVISIAGIDDGGEKRAEICNKIVEACEEWGVFQIVDHGVDAKLVSEMTTLAKEF 92 (120)
T ss_pred CCCCHhhcCChhhCcCccccccCCCCCeEECccccCCchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHH
Confidence 68999999999888821 2357999999832 36889999999999999999999999999999999999
Q ss_pred cCCCHHHHhhhccCCCCccccccc
Q 043251 98 FSLPSRQKLKALRAPAGATGYGIA 121 (342)
Q Consensus 98 F~lP~e~K~~~~~~~~~~~GY~~~ 121 (342)
|+||.|+|+++...++...||+..
T Consensus 93 F~LP~e~K~k~~~~~~~~~gy~~~ 116 (120)
T PLN03176 93 FALPPEEKLRFDMSGGKKGGFIVS 116 (120)
T ss_pred HCCCHHHHHhcccCCCccCCcchh
Confidence 999999999998776667899653
No 30
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=96.45 E-value=0.0016 Score=50.60 Aligned_cols=79 Identities=30% Similarity=0.463 Sum_probs=53.1
Q ss_pred eeccccCCCCCccCCccccCCCCC-----CceEEEee--CC-----CCceeEEec---CCceEEec-----CCCCcEEEE
Q 043251 203 LQLNSYPSCPEPNRAVGLAPHTDT-----SLITILHE--NS-----IAGLQIFKQ---EVGWVSVK-----PVDGALVVN 262 (342)
Q Consensus 203 lrl~~YP~~~~~~~~~g~~~HtD~-----g~lTlL~q--d~-----~~GLqV~~~---~g~W~~V~-----p~~g~~vVn 262 (342)
+++++|++. ....+|+|. ..+|+|+. +. .+.|++... ++....++ |.+|.+|+.
T Consensus 1 ~~~~~y~~G------~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F 74 (100)
T PF13640_consen 1 MQLNRYPPG------GFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIF 74 (100)
T ss_dssp -EEEEEETT------EEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEE
T ss_pred CEEEEECcC------CEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEE
Confidence 456777542 257899998 57888843 22 356777752 34566666 999999987
Q ss_pred ccchhhhhhCCccCCcccccccC-CCCCeeEEEEeeC
Q 043251 263 VGDLFHILSNARFPNVLHRVSVN-QKRQRLSLAYFYN 298 (342)
Q Consensus 263 iGd~L~~~TnG~~ks~~HRV~~~-~~~~R~Si~~F~~ 298 (342)
-+ ...+|+|... ....|+++.+|++
T Consensus 75 ~~-----------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 75 PS-----------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp ES-----------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred eC-----------CCCeecCcccCCCCCEEEEEEEEC
Confidence 65 4578999866 6678999999874
No 31
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=95.11 E-value=0.28 Score=42.21 Aligned_cols=105 Identities=20% Similarity=0.211 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHhcCCChhhhhhhhccCCccceeccccCCCCCccCCccccCCCCCC--------ceEEEee--C--CCCc
Q 043251 172 LADQLTQLIFKSLDISEEQAEEMNWVGSSSALQLNSYPSCPEPNRAVGLAPHTDTS--------LITILHE--N--SIAG 239 (342)
Q Consensus 172 l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~g--------~lTlL~q--d--~~~G 239 (342)
+...|.+.+...++++.. . ......+++.+|.+. -...+|.|.. .+|+++- + ..|.
T Consensus 60 ~~~~l~~~i~~~~~~~~~-~-----~~~~~~~~~~~Y~~g------~~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~ 127 (178)
T smart00702 60 VIERIRQRLADFLGLLRG-L-----PLSAEDAQVARYGPG------GHYGPHVDNFEDDENGDRIATFLLYLNDVEEGGE 127 (178)
T ss_pred HHHHHHHHHHHHHCCCch-h-----hccCcceEEEEECCC------CcccCcCCCCCCCCCCCeEEEEEEEeccCCcCce
Confidence 444455555555665321 1 112455888999863 2467899966 5788764 3 2344
Q ss_pred eeEEecC-CceEEecCCCCcEEEEc-cchhhhhhCCccCCcccccccCCCCCeeEEEEeeC
Q 043251 240 LQIFKQE-VGWVSVKPVDGALVVNV-GDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYN 298 (342)
Q Consensus 240 LqV~~~~-g~W~~V~p~~g~~vVni-Gd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 298 (342)
|.+...+ .....|.|..|.+|+.- ++ +.++|.|..-..+.|+++..+++
T Consensus 128 ~~f~~~~~~~~~~v~P~~G~~v~f~~~~----------~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 128 LVFPGLGLMVCATVKPKKGDLLFFPSGR----------GRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred EEecCCCCccceEEeCCCCcEEEEeCCC----------CCccccCCcceeCCEEEEEEEEC
Confidence 6665543 13568999999888854 32 16789998666678999998864
No 32
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=94.37 E-value=0.36 Score=43.62 Aligned_cols=49 Identities=24% Similarity=0.215 Sum_probs=36.8
Q ss_pred CCceeEEecCCceEEecCCCCcEEEEccchhhhhhCCccCCcccccccCCCCCeeEEEEeeC
Q 043251 237 IAGLQIFKQEVGWVSVKPVDGALVVNVGDLFHILSNARFPNVLHRVSVNQKRQRLSLAYFYN 298 (342)
Q Consensus 237 ~~GLqV~~~~g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 298 (342)
.|.|.+.+..|. ..|+|..|.+||.-. +.+|+|..-..+.||++.+.+.
T Consensus 129 GGEl~~~~~~g~-~~Vkp~aG~~vlfps------------~~lH~v~pVt~G~R~~~~~Wi~ 177 (226)
T PRK05467 129 GGELVIEDTYGE-HRVKLPAGDLVLYPS------------TSLHRVTPVTRGVRVASFFWIQ 177 (226)
T ss_pred CCceEEecCCCc-EEEecCCCeEEEECC------------CCceeeeeccCccEEEEEecHH
Confidence 555888765544 678888888888664 4789998655678999988874
No 33
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=92.60 E-value=0.45 Score=41.05 Aligned_cols=68 Identities=19% Similarity=0.165 Sum_probs=47.6
Q ss_pred ccccCCCCC----CceEEEeeC----CCCceeEEec-----CCceEEecCCCCcEEEEccchhhhhhCCccCCccccccc
Q 043251 218 VGLAPHTDT----SLITILHEN----SIAGLQIFKQ-----EVGWVSVKPVDGALVVNVGDLFHILSNARFPNVLHRVSV 284 (342)
Q Consensus 218 ~g~~~HtD~----g~lTlL~qd----~~~GLqV~~~-----~g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~ 284 (342)
.....|.|. ..+|++..- ..+|+-++.. .| +.|.+.+|++|+..|-.+ .|-|..
T Consensus 85 r~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g--~~~~~~~GtVl~~~~~~~-----------~Hgvtp 151 (171)
T PF12851_consen 85 RCTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILG--VAFAYQPGTVLIFCAKRE-----------LHGVTP 151 (171)
T ss_pred cCccceecCCCCCCCeEEEEecCCccccCceEeccccccccCC--EEEecCCCcEEEEcccce-----------eeecCc
Confidence 356889998 777887652 3567776655 44 788999999999888543 344431
Q ss_pred C-----CCCCeeEEEEeeC
Q 043251 285 N-----QKRQRLSLAYFYN 298 (342)
Q Consensus 285 ~-----~~~~R~Si~~F~~ 298 (342)
- ...+|+|++||.+
T Consensus 152 v~~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 152 VESPNRNHGTRISLVFYQH 170 (171)
T ss_pred ccCCCCCCCeEEEEEEEeE
Confidence 1 2358999999985
No 34
>PRK08130 putative aldolase; Validated
Probab=83.13 E-value=1.5 Score=39.18 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=29.1
Q ss_pred CCCceeeCCC---hHHHHHHHHHHHhccEEEEEcCCC
Q 043251 49 ISVPVIDLRD---PRVAQLIGRACEKWGVFQLIYHGI 82 (342)
Q Consensus 49 ~~iPvIDls~---~~~~~~l~~A~~~~GFF~l~nhGi 82 (342)
..||++++.. .+.++.+.+++++...+.+.|||+
T Consensus 126 g~i~v~~y~~~g~~~la~~~~~~l~~~~~vll~nHGv 162 (213)
T PRK08130 126 GHVPLIPYYRPGDPAIAEALAGLAARYRAVLLANHGP 162 (213)
T ss_pred CccceECCCCCChHHHHHHHHHHhccCCEEEEcCCCC
Confidence 3699999863 477889999999999999999995
No 35
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=75.36 E-value=16 Score=32.63 Aligned_cols=78 Identities=18% Similarity=0.196 Sum_probs=45.7
Q ss_pred eeccccCCCCCccCCccccCCCCCC-----ceEEEeeCCCCceeEEe---cCCceEEecCCCCcEEEEccchhhhhhCCc
Q 043251 203 LQLNSYPSCPEPNRAVGLAPHTDTS-----LITILHENSIAGLQIFK---QEVGWVSVKPVDGALVVNVGDLFHILSNAR 274 (342)
Q Consensus 203 lrl~~YP~~~~~~~~~g~~~HtD~g-----~lTlL~qd~~~GLqV~~---~~g~W~~V~p~~g~~vVniGd~L~~~TnG~ 274 (342)
.-+|+|.+. . +++.|.|-. ..-+-+.=+.+...... +++.+..+.-..|.++|.-|++ +.|
T Consensus 118 ~LvN~Y~~G-----~-~mg~H~D~~E~~~~~pI~SvSLG~~~~F~~~~~~~~~~~~~l~L~~Gdllvm~G~s-r~~---- 186 (213)
T PRK15401 118 CLINRYAPG-----A-KLSLHQDKDERDFRAPIVSVSLGLPAVFQFGGLKRSDPLQRILLEHGDVVVWGGPS-RLR---- 186 (213)
T ss_pred EEEEeccCc-----C-ccccccCCCcccCCCCEEEEeCCCCeEEEecccCCCCceEEEEeCCCCEEEECchH-hhe----
Confidence 557889853 2 789999942 11111111333332221 2346899999999999999985 333
Q ss_pred cCCcccccccC-------CCCCeeEEEE
Q 043251 275 FPNVLHRVSVN-------QKRQRLSLAY 295 (342)
Q Consensus 275 ~ks~~HRV~~~-------~~~~R~Si~~ 295 (342)
.|.|... .+..|+|+.|
T Consensus 187 ----~HgVp~~~~~~~p~~g~~RINLTF 210 (213)
T PRK15401 187 ----YHGILPLKAGEHPLTGECRINLTF 210 (213)
T ss_pred ----eccCCcCCCCcCCCCCCCeEEEEe
Confidence 3554311 1236999987
No 36
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=72.01 E-value=5.6 Score=30.77 Aligned_cols=37 Identities=30% Similarity=0.479 Sum_probs=23.5
Q ss_pred CceEEecCCCCcEEEEccchhhhhhCCccCCcccccccCCC-CCeeEEEE
Q 043251 247 VGWVSVKPVDGALVVNVGDLFHILSNARFPNVLHRVSVNQK-RQRLSLAY 295 (342)
Q Consensus 247 g~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~-~~R~Si~~ 295 (342)
..++.++|.+|.+||.-+.+ .|+|....+ .+|+||+|
T Consensus 63 ~~~~~~~p~~G~lvlFPs~l------------~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 63 SPYYIVEPEEGDLVLFPSWL------------WHGVPPNNSDEERISISF 100 (101)
T ss_dssp -SEEEE---TTEEEEEETTS------------EEEE----SSS-EEEEEE
T ss_pred CceEEeCCCCCEEEEeCCCC------------EEeccCcCCCCCEEEEEc
Confidence 36888999999999988753 699986554 48999997
No 37
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=68.32 E-value=8.5 Score=34.11 Aligned_cols=38 Identities=26% Similarity=0.487 Sum_probs=30.8
Q ss_pred ceEEecCCCCcEEEEccchhhhhhCCccCCcccccccCCC-CCeeEEEEee
Q 043251 248 GWVSVKPVDGALVVNVGDLFHILSNARFPNVLHRVSVNQK-RQRLSLAYFY 297 (342)
Q Consensus 248 ~W~~V~p~~g~~vVniGd~L~~~TnG~~ks~~HRV~~~~~-~~R~Si~~F~ 297 (342)
.|+.|.|.+|.+|+.-+. -.|+|..+.+ ++|+||+|=+
T Consensus 160 ~~~~v~P~~G~lvlFPS~------------L~H~v~p~~~~~~RISiSFNl 198 (201)
T TIGR02466 160 RFVYVPPQEGRVLLFESW------------LRHEVPPNESEEERISVSFNY 198 (201)
T ss_pred ccEEECCCCCeEEEECCC------------CceecCCCCCCCCEEEEEEee
Confidence 689999999999997664 3699987664 5899999844
No 38
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=63.93 E-value=9.2 Score=33.02 Aligned_cols=84 Identities=18% Similarity=0.238 Sum_probs=43.0
Q ss_pred ceeccccCCCCCccCCccccCCCCCCce-------EEEeeCCCCc-eeEEec--CCceEEecCCCCcEEEEccchhhhhh
Q 043251 202 ALQLNSYPSCPEPNRAVGLAPHTDTSLI-------TILHENSIAG-LQIFKQ--EVGWVSVKPVDGALVVNVGDLFHILS 271 (342)
Q Consensus 202 ~lrl~~YP~~~~~~~~~g~~~HtD~g~l-------TlL~qd~~~G-LqV~~~--~g~W~~V~p~~g~~vVniGd~L~~~T 271 (342)
..-+|+|.+ +. ++++|.|--.+ +|-+ +... +.+... .+..+.|...+|+++|.-|++=..|
T Consensus 98 ~~liN~Y~~-----g~-~i~~H~D~~~~~~~~~I~slSL--G~~~~~~f~~~~~~~~~~~~~L~~gsl~vm~g~~r~~~- 168 (194)
T PF13532_consen 98 QCLINYYRD-----GS-GIGPHSDDEEYGFGPPIASLSL--GSSRVFRFRNKSDDDEPIEVPLPPGSLLVMSGEARYDW- 168 (194)
T ss_dssp EEEEEEESS-----TT--EEEE---TTC-CCSEEEEEEE--ES-EEEEEEECGGTS-EEEEEE-TTEEEEEETTHHHHE-
T ss_pred EEEEEecCC-----CC-CcCCCCCcccccCCCcEEEEEE--ccCceEEEeeccCCCccEEEEcCCCCEEEeChHHhhhe-
Confidence 456789986 23 78999987633 2222 2222 333332 2579999999999999999986655
Q ss_pred CCccCCccccccc--CCCCCeeEEEE
Q 043251 272 NARFPNVLHRVSV--NQKRQRLSLAY 295 (342)
Q Consensus 272 nG~~ks~~HRV~~--~~~~~R~Si~~ 295 (342)
-|.-+... .... .....|+||.|
T Consensus 169 H~I~~~~~-~~~~~~~~~~~RislTf 193 (194)
T PF13532_consen 169 HGIPPVKK-DTHPSHYVRGRRISLTF 193 (194)
T ss_dssp EEE-S-SC-EEEESTEE-S-EEEEEE
T ss_pred eEcccccC-CccccccCCCCEEEEEe
Confidence 44333211 0000 01236999986
No 39
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.; PDB: 2CSG_A 2DBI_A 2DBN_A.
Probab=60.76 E-value=13 Score=36.66 Aligned_cols=52 Identities=15% Similarity=0.166 Sum_probs=36.9
Q ss_pred CCCCCceeeCCCh---HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcC
Q 043251 47 NKISVPVIDLRDP---RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFS 99 (342)
Q Consensus 47 ~~~~iPvIDls~~---~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~ 99 (342)
.+.-||.||+++. ...++..+.+++.|++.|.|. ||.+...+..+..++|.+
T Consensus 46 G~~~IP~i~f~di~~~~~~~~~~~~ir~rG~~VIR~V-vp~~ea~~w~~e~~~Y~~ 100 (416)
T PF07350_consen 46 GSSIIPEIDFADIENGGVSEEFLAEIRRRGCVVIRGV-VPREEALAWKQELKEYLK 100 (416)
T ss_dssp T--SS-EEEHHHHHCT---HHHHHHHHHHSEEEECTS-S-HHHHHHHHHHHHHHHH
T ss_pred CCCCCceeeHHHHhCCCCCHHHHHHHHhcCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 4567999999864 467889999999999999886 888888877777776653
No 40
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=53.68 E-value=18 Score=29.09 Aligned_cols=45 Identities=24% Similarity=0.226 Sum_probs=34.7
Q ss_pred ceeeCCChHHHHHHHHHHHhccEEEEEcC-CCChHHHHHHHHHHHH
Q 043251 52 PVIDLRDPRVAQLIGRACEKWGVFQLIYH-GIPLNVLKDAESEARR 96 (342)
Q Consensus 52 PvIDls~~~~~~~l~~A~~~~GFF~l~nh-Gi~~~l~~~~~~~~~~ 96 (342)
=+||++.++......+.|.+.|.=.|++- |.+.+.++.+.+++++
T Consensus 70 VvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~ 115 (124)
T PF01113_consen 70 VVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFSDEQIDELEELAKK 115 (124)
T ss_dssp EEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSHHHHHHHHHHHTTT
T ss_pred EEEEcCChHHhHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHHhcc
Confidence 57899999999999999999999999975 8887777777665543
No 41
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=52.58 E-value=17 Score=31.43 Aligned_cols=34 Identities=21% Similarity=0.472 Sum_probs=28.7
Q ss_pred CCCceeeCCC---hHHHHHHHHHHHhccEEEEEcCCC
Q 043251 49 ISVPVIDLRD---PRVAQLIGRACEKWGVFQLIYHGI 82 (342)
Q Consensus 49 ~~iPvIDls~---~~~~~~l~~A~~~~GFF~l~nhGi 82 (342)
..||++++.. .+.++.+.+++++...+.|.|||+
T Consensus 119 ~~v~v~~~~~~g~~~la~~~~~~l~~~~~vll~nHGv 155 (184)
T PRK08333 119 KKIPILPFRPAGSVELAEQVAEAMKEYDAVIMERHGI 155 (184)
T ss_pred CCEeeecCCCCCcHHHHHHHHHHhccCCEEEEcCCCC
Confidence 3699999863 467888999999989999999996
No 42
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=50.86 E-value=34 Score=31.62 Aligned_cols=45 Identities=18% Similarity=0.148 Sum_probs=39.2
Q ss_pred ceeeCCChHHHHHHHHHHHhccEEEEEcC-CCChHHHHHHHHHHHH
Q 043251 52 PVIDLRDPRVAQLIGRACEKWGVFQLIYH-GIPLNVLKDAESEARR 96 (342)
Q Consensus 52 PvIDls~~~~~~~l~~A~~~~GFF~l~nh-Gi~~~l~~~~~~~~~~ 96 (342)
=+|||+.|+...++.+.|.+.|.-.|++. |.+.+.++.+.++++.
T Consensus 72 V~IDFT~P~~~~~~l~~~~~~~~~lVIGTTGf~~e~~~~l~~~a~~ 117 (266)
T COG0289 72 VLIDFTTPEATLENLEFALEHGKPLVIGTTGFTEEQLEKLREAAEK 117 (266)
T ss_pred EEEECCCchhhHHHHHHHHHcCCCeEEECCCCCHHHHHHHHHHHhh
Confidence 37999999999999999999998888886 9999988888887766
No 43
>PF06820 Phage_fiber_C: Putative prophage tail fibre C-terminus; InterPro: IPR009640 This entry represents the C terminus of phage 933W tail fibre protein. This domain is found together with conserved RLGP motif. The characteristics of the protein distribution suggest prophage matches.
Probab=50.30 E-value=16 Score=25.41 Aligned_cols=36 Identities=28% Similarity=0.362 Sum_probs=24.7
Q ss_pred ccccCCCCCC---ceEEE-------eeCCCCceeEEecCCceEEec
Q 043251 218 VGLAPHTDTS---LITIL-------HENSIAGLQIFKQEVGWVSVK 253 (342)
Q Consensus 218 ~g~~~HtD~g---~lTlL-------~qd~~~GLqV~~~~g~W~~V~ 253 (342)
.|.-+-+|.. -||+| +|.-..-|||+..+|.|.+|.
T Consensus 16 nG~~P~tdg~liT~ltfL~pkd~~~vq~~f~~LQv~fgDGpWqdik 61 (64)
T PF06820_consen 16 NGWFPETDGRLITGLTFLDPKDATRVQGVFRHLQVRFGDGPWQDIK 61 (64)
T ss_pred CccccCCCcceEeeeEEecccCchhheeeeeeeEEEeccCChhhcc
Confidence 3556666643 45566 333457899999999999886
No 44
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=46.96 E-value=23 Score=31.74 Aligned_cols=33 Identities=24% Similarity=0.305 Sum_probs=28.6
Q ss_pred CCceeeCC---ChHHHHHHHHHHHhccEEEEEcCCC
Q 043251 50 SVPVIDLR---DPRVAQLIGRACEKWGVFQLIYHGI 82 (342)
Q Consensus 50 ~iPvIDls---~~~~~~~l~~A~~~~GFF~l~nhGi 82 (342)
.+|++++. +.+.++.+.+++.+...+.|.|||+
T Consensus 127 ~v~~~~y~~~gs~ela~~v~~~l~~~~~vlL~nHGv 162 (217)
T PRK05874 127 DVRCTEYAASGTPEVGRNAVRALEGRAAALIANHGL 162 (217)
T ss_pred ceeeecCCCCCcHHHHHHHHHHhCcCCEEEEcCCCC
Confidence 48888886 3478899999999999999999996
No 45
>PRK06661 hypothetical protein; Provisional
Probab=40.32 E-value=19 Score=32.58 Aligned_cols=69 Identities=13% Similarity=0.130 Sum_probs=41.7
Q ss_pred hHhhhcCC-------CCCCcccccccCCCCCCCCCCcCCCCCCCCCCCCCCceeeCCC-----hHHHHHHHHHHHhccEE
Q 043251 8 SEAYREHP-------LHPHHIIPIDFNSVCSLPESHKWPKFDDLYDNKISVPVIDLRD-----PRVAQLIGRACEKWGVF 75 (342)
Q Consensus 8 ~~~~~~~~-------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~iPvIDls~-----~~~~~~l~~A~~~~GFF 75 (342)
.+.||.-| .||-+...++..+. .+|+.. .... .-...||..++.+ .+..+.+.+++.+...+
T Consensus 80 ~~IY~~rpdv~aVvH~H~~~a~a~s~~~~-~~~p~~---~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~a~~l~~~~av 153 (231)
T PRK06661 80 GSIYKTRPDISAIFHYHTPASIAVSALKC-GLLPIS---QWAL--HFYDRISYHNYNSLALDADKQSSRLVNDLKQNYVM 153 (231)
T ss_pred HHHHHcCCCCCEEEEECChHHHHHHhcCC-CCCCcc---HhHH--HHcCCceecCCCccccCchhHHHHHHHHhCCCCEE
Confidence 45688776 45555555554432 333211 0000 0113477777653 35588899999999999
Q ss_pred EEEcCCC
Q 043251 76 QLIYHGI 82 (342)
Q Consensus 76 ~l~nhGi 82 (342)
.|.|||+
T Consensus 154 ll~nHG~ 160 (231)
T PRK06661 154 LLRNHGA 160 (231)
T ss_pred EECCCCC
Confidence 9999996
No 46
>PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=40.06 E-value=19 Score=32.46 Aligned_cols=71 Identities=17% Similarity=0.146 Sum_probs=40.1
Q ss_pred hHhhhcCC-----CCCCcccccccCCC-CCCCCCCcCCCCCCCCCCCCCCceeeCCC---------hHHHHHHHHHHHhc
Q 043251 8 SEAYREHP-----LHPHHIIPIDFNSV-CSLPESHKWPKFDDLYDNKISVPVIDLRD---------PRVAQLIGRACEKW 72 (342)
Q Consensus 8 ~~~~~~~~-----~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~iPvIDls~---------~~~~~~l~~A~~~~ 72 (342)
.+.||..| +|.|-.....++.. ..+|.. ...... .....||++++.. .+..+.+.+++++.
T Consensus 80 ~~IYr~rpdv~AVvHtHsp~ata~s~~~~~l~~~-~~~~~~---~~~~~ip~~~~~~~~~~~~~~~~~~~~~ia~~l~~~ 155 (231)
T PRK08193 80 LVLYKAFPEIGGIVHTHSRHATAWAQAGRDIPAL-GTTHAD---YFYGDIPCTRKMTDEEINGEYEWETGKVIVETFEKR 155 (231)
T ss_pred HHHHHhCCCCcEEEecCcHHHHHHHhcCCCCCcc-hHHHHH---HhCCCcceecCCCcccccccchhhHHHHHHHHHhhc
Confidence 46788887 46665543333332 234421 101000 0123589987542 24667788888764
Q ss_pred -------cEEEEEcCCC
Q 043251 73 -------GVFQLIYHGI 82 (342)
Q Consensus 73 -------GFF~l~nhGi 82 (342)
..+.|.|||+
T Consensus 156 ~~~~~~~~avLl~nHG~ 172 (231)
T PRK08193 156 GIDPAAVPGVLVHSHGP 172 (231)
T ss_pred cCCcccCCEEEEcCCCc
Confidence 4799999996
No 47
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=39.43 E-value=30 Score=32.09 Aligned_cols=34 Identities=15% Similarity=0.169 Sum_probs=28.7
Q ss_pred CCCceeeCC---ChHHHHHHHHHHHhccEEEEEcCCC
Q 043251 49 ISVPVIDLR---DPRVAQLIGRACEKWGVFQLIYHGI 82 (342)
Q Consensus 49 ~~iPvIDls---~~~~~~~l~~A~~~~GFF~l~nhGi 82 (342)
..||++.+. ..+.++.+.+++++..-+.|.|||+
T Consensus 176 ~~i~vvp~~~pGs~eLA~~v~~~l~~~~avLL~nHGv 212 (270)
T TIGR02624 176 DGVGIIPWMVPGTNEIGEATAEKMKEHRLVLWPHHGI 212 (270)
T ss_pred CccccccCcCCCCHHHHHHHHHHhccCCEEEEcCCCC
Confidence 358888886 3478889999999999999999996
No 48
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=38.91 E-value=72 Score=28.40 Aligned_cols=68 Identities=18% Similarity=0.178 Sum_probs=41.0
Q ss_pred ccceeccccCCCCC-ccCCccccCCCCCCceEEEeeCCCCceeEEec-CCceEEecCCCCcEEEEccchhhhhhC
Q 043251 200 SSALQLNSYPSCPE-PNRAVGLAPHTDTSLITILHENSIAGLQIFKQ-EVGWVSVKPVDGALVVNVGDLFHILSN 272 (342)
Q Consensus 200 ~~~lrl~~YP~~~~-~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~-~g~W~~V~p~~g~~vVniGd~L~~~Tn 272 (342)
...+|.+||.|... ++-...+..+ =..+.|+..+-..+..- .|.=+.|||-=++.++|+||-=-.+.+
T Consensus 89 ~G~~~~~H~Hp~ade~E~y~vi~G~-----g~m~v~~~~G~~~v~~~~~Gd~iyVPp~~gH~t~N~Gd~pLvf~~ 158 (209)
T COG2140 89 PGAMRELHYHPNADEPEIYYVLKGE-----GRMLVQKPEGEARVIAVRAGDVIYVPPGYGHYTINTGDEPLVFLN 158 (209)
T ss_pred CCcccccccCCCCCcccEEEEEecc-----EEEEEEcCCCcEEEEEecCCcEEEeCCCcceEeecCCCCCEEEEE
Confidence 45678888866543 3322233322 23444555555555443 267889999999999999995444444
No 49
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=38.60 E-value=56 Score=31.57 Aligned_cols=48 Identities=19% Similarity=0.102 Sum_probs=36.0
Q ss_pred CCCCceeeCCC----hHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhc
Q 043251 48 KISVPVIDLRD----PRVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLF 98 (342)
Q Consensus 48 ~~~iPvIDls~----~~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF 98 (342)
...+|.||+++ .+.+.++.+++.++|+..+.|-.++.+.+ .+.++.|-
T Consensus 107 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~G~v~~rg~~~~~~~~---~~~~~~~G 158 (366)
T TIGR02409 107 ELSLPKFDHEAVMKDDSVLLDWLSAVRDVGIAVLKGAPTKPGAV---EKLGKRIG 158 (366)
T ss_pred cccCCceeHHHHhCCHHHHHHHHHHHHhccEEEEeCCCCCHHHH---HHHHHHhc
Confidence 46789999863 46788999999999999999988765443 34455553
No 50
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=37.18 E-value=34 Score=30.37 Aligned_cols=34 Identities=21% Similarity=0.178 Sum_probs=27.6
Q ss_pred CCCceeeCCC---hHHHHHHHHHHHhccEEEEEcCCC
Q 043251 49 ISVPVIDLRD---PRVAQLIGRACEKWGVFQLIYHGI 82 (342)
Q Consensus 49 ~~iPvIDls~---~~~~~~l~~A~~~~GFF~l~nhGi 82 (342)
..||++++.. .+.++.+.+++.+...+.|.|||+
T Consensus 123 ~~i~~~~y~~~gs~~la~~v~~~l~~~~~vll~nHGv 159 (214)
T PRK06833 123 PNVRCAEYATFGTKELAENAFEAMEDRRAVLLANHGL 159 (214)
T ss_pred CCeeeccCCCCChHHHHHHHHHHhCcCCEEEECCCCC
Confidence 3588887753 366788899999999999999996
No 51
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=36.69 E-value=21 Score=30.68 Aligned_cols=34 Identities=26% Similarity=0.326 Sum_probs=28.4
Q ss_pred CCCceeeCCC---hHHHHHHHHHHH-hccEEEEEcCCC
Q 043251 49 ISVPVIDLRD---PRVAQLIGRACE-KWGVFQLIYHGI 82 (342)
Q Consensus 49 ~~iPvIDls~---~~~~~~l~~A~~-~~GFF~l~nhGi 82 (342)
..+|+++... .+..+.|.++++ +...+.+.|||+
T Consensus 122 ~~v~~~~~~~~~~~~l~~~i~~~l~~~~~~vll~nHG~ 159 (184)
T PF00596_consen 122 GEVPVVPYAPPGSEELAEAIAEALGEDRKAVLLRNHGV 159 (184)
T ss_dssp SCEEEE-THSTTCHHHHHHHHHHHTCTSSEEEETTTEE
T ss_pred ccceeeccccccchhhhhhhhhhhcCCceEEeecCCce
Confidence 6799999975 356789999999 889999999995
No 52
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=35.63 E-value=45 Score=29.66 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=27.9
Q ss_pred CCCceeeCC---ChHHHHHHHHHHHhccEEEEEcCCC
Q 043251 49 ISVPVIDLR---DPRVAQLIGRACEKWGVFQLIYHGI 82 (342)
Q Consensus 49 ~~iPvIDls---~~~~~~~l~~A~~~~GFF~l~nhGi 82 (342)
..||++.+. +.+.++.+.+++.+...+.+.|||+
T Consensus 121 ~~v~~~~y~~~gs~~la~~~~~~l~~~~~vLl~nHGv 157 (215)
T PRK08087 121 NSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_pred CCceeecCCCCCCHHHHHHHHHHhCcCCEEEecCCCC
Confidence 358888875 3467888999998888999999996
No 53
>TIGR02130 dapB_plant dihydrodipicolinate reductase. This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.
Probab=34.96 E-value=76 Score=29.57 Aligned_cols=39 Identities=18% Similarity=0.112 Sum_probs=33.3
Q ss_pred ceeeCCChHHHHHHHHHHHhccEEEEEcC-CCChHHHHHH
Q 043251 52 PVIDLRDPRVAQLIGRACEKWGVFQLIYH-GIPLNVLKDA 90 (342)
Q Consensus 52 PvIDls~~~~~~~l~~A~~~~GFF~l~nh-Gi~~~l~~~~ 90 (342)
=+|||+.|+......++|.+.|.-.|++- |.+.+.++++
T Consensus 72 VvIDFT~P~~~~~n~~~~~~~gv~~ViGTTG~~~~~~~~l 111 (275)
T TIGR02130 72 ICIDYTHPSAVNDNAAFYGKHGIPFVMGTTGGDREALAKL 111 (275)
T ss_pred EEEECCChHHHHHHHHHHHHCCCCEEEcCCCCCHHHHHHH
Confidence 56999999999999999999999999886 8887766655
No 54
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=33.90 E-value=43 Score=31.13 Aligned_cols=67 Identities=16% Similarity=0.121 Sum_probs=42.3
Q ss_pred CCCCcccccccCCCCCCCC-CCcCCC--CCCC-C-CCCCCCceeeCCC---hHHHHHHHHHHHhccEEEEEcCCC
Q 043251 16 LHPHHIIPIDFNSVCSLPE-SHKWPK--FDDL-Y-DNKISVPVIDLRD---PRVAQLIGRACEKWGVFQLIYHGI 82 (342)
Q Consensus 16 ~~~~~~~~~~~~~~~~~p~-~~~~~~--~~~~-~-~~~~~iPvIDls~---~~~~~~l~~A~~~~GFF~l~nhGi 82 (342)
+|.|-.....++....+|. .+..+- .... . .-...||++.+.. .+.++.+.+++++...+.|.|||+
T Consensus 140 vHtHs~~atals~~~~l~~~~~~~~~~~~~~e~~~~~~~~i~vvpy~~pgs~eLa~~v~~~l~~~~avLL~nHGv 214 (274)
T PRK03634 140 MHCHATNLIALTYVLELDEAVFTRTLWEMSTECLVVFPDGVGIVPWMVPGTDEIGQATAEKMQKHDLVLWPKHGV 214 (274)
T ss_pred EecCchHHHHHHCcCCcChHhhhhhhhhcCccceeEeCCceeEecCCCCCCHHHHHHHHHHhccCCEEEEcCCCC
Confidence 7888777666666544442 221111 0000 0 0113589998863 477888999999999999999996
No 55
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=33.49 E-value=57 Score=28.04 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=27.1
Q ss_pred CCCceeeCC---ChHHHHHHHHHHHhccEEEEEcCCC
Q 043251 49 ISVPVIDLR---DPRVAQLIGRACEKWGVFQLIYHGI 82 (342)
Q Consensus 49 ~~iPvIDls---~~~~~~~l~~A~~~~GFF~l~nhGi 82 (342)
..||++ .. ..+.++.+.+++.+.-.+.|.|||+
T Consensus 114 ~~ipv~-~~~~~~~~la~~v~~~l~~~~~vll~nHG~ 149 (181)
T PRK08660 114 GTIPVV-GGDIGSGELAENVARALSEHKGVVVRGHGT 149 (181)
T ss_pred CCEeEE-eCCCCCHHHHHHHHHHHhhCCEEEEcCCCc
Confidence 359998 43 3477889999999999999999995
No 56
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=33.38 E-value=22 Score=24.28 Aligned_cols=30 Identities=13% Similarity=0.305 Sum_probs=23.1
Q ss_pred EEecCCceEEecCCCCcEEEEccchhhhhhCCc
Q 043251 242 IFKQEVGWVSVKPVDGALVVNVGDLFHILSNAR 274 (342)
Q Consensus 242 V~~~~g~W~~V~p~~g~~vVniGd~L~~~TnG~ 274 (342)
|++++|+++.|+-.++ +.+|+..+.-.+..
T Consensus 10 VlT~dGeF~~ik~~~~---~~vG~eI~~~~~~~ 39 (56)
T PF12791_consen 10 VLTPDGEFIKIKRKPG---MEVGQEIEFDEKDI 39 (56)
T ss_pred EEcCCCcEEEEeCCCC---CcccCEEEEechhh
Confidence 4567889999999888 88898776655543
No 57
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed
Probab=31.29 E-value=49 Score=29.27 Aligned_cols=33 Identities=27% Similarity=0.556 Sum_probs=26.7
Q ss_pred CCceee-CCC-hHHHHHHHHHHH-hccEEEEEcCCC
Q 043251 50 SVPVID-LRD-PRVAQLIGRACE-KWGVFQLIYHGI 82 (342)
Q Consensus 50 ~iPvID-ls~-~~~~~~l~~A~~-~~GFF~l~nhGi 82 (342)
.||+++ +.. ++.++.+.++++ +...+.|.|||+
T Consensus 137 ~vpv~~~~~~~~eLa~~v~~~l~~~~~avLl~nHG~ 172 (208)
T PRK06754 137 HIPIIENHADIPTLAEEFAKHIQGDSGAVLIRNHGI 172 (208)
T ss_pred EEEEecCCCCHHHHHHHHHHHhccCCcEEEECCCce
Confidence 589996 543 477888889987 888999999995
No 58
>PRK06486 hypothetical protein; Provisional
Probab=31.07 E-value=43 Score=30.86 Aligned_cols=71 Identities=18% Similarity=0.175 Sum_probs=42.2
Q ss_pred hHhhhcCC-----CCCCcccccccCCCCCCCCCCcCCCCCCCC-CCCCCCceee-CC----ChHHHHHHHHHHHhccEEE
Q 043251 8 SEAYREHP-----LHPHHIIPIDFNSVCSLPESHKWPKFDDLY-DNKISVPVID-LR----DPRVAQLIGRACEKWGVFQ 76 (342)
Q Consensus 8 ~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~iPvID-ls----~~~~~~~l~~A~~~~GFF~ 76 (342)
.+.||..| +|.|......++.+...|- +...... .--..||++. +. +.+.++.+.+++.+...+.
T Consensus 104 ~~IYr~rpDv~aVvHtHs~~a~a~s~~~~~~l----~~~~~~~~~~~g~i~~~~~~~~~~~s~ela~~va~al~~~~avL 179 (262)
T PRK06486 104 ARIHRAIPRAKAAFHTHMPYATALSLTEGRPL----TTLGQTALKFYGRTAVDEDYNGLALDAAEGDRIARAMGDADIVF 179 (262)
T ss_pred HHHHHhCCCCCEEEEeCChHHhhhhhcCCCCC----CcccHHHHHHCCCeeeccCCCCccCchhHHHHHHHHhCcCCEEE
Confidence 45788777 6777665555554321110 1110000 0112467664 32 3577889999999999999
Q ss_pred EEcCCC
Q 043251 77 LIYHGI 82 (342)
Q Consensus 77 l~nhGi 82 (342)
|.|||+
T Consensus 180 L~nHG~ 185 (262)
T PRK06486 180 LKNHGV 185 (262)
T ss_pred ECCCCC
Confidence 999996
No 59
>PRK06755 hypothetical protein; Validated
Probab=31.06 E-value=46 Score=29.61 Aligned_cols=33 Identities=15% Similarity=0.255 Sum_probs=25.6
Q ss_pred CCceeeCCC---hHHHHHHHHHHHhccEEEEEcCCC
Q 043251 50 SVPVIDLRD---PRVAQLIGRACEKWGVFQLIYHGI 82 (342)
Q Consensus 50 ~iPvIDls~---~~~~~~l~~A~~~~GFF~l~nhGi 82 (342)
.||+|++.. .+.++.+.+++++...+.|.|||+
T Consensus 136 ~IPiv~~~~~~~~~la~~~~~~~~~~~avLl~~HGv 171 (209)
T PRK06755 136 TIPIVEDEKKFADLLENNVPNFIEGGGVVLVHNYGM 171 (209)
T ss_pred EEEEEeCCCchhHHHHHHHHhhccCCCEEEEcCCCe
Confidence 699998763 245566667777888999999996
No 60
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=30.42 E-value=2.9e+02 Score=23.59 Aligned_cols=59 Identities=17% Similarity=0.202 Sum_probs=35.4
Q ss_pred ceeccccCCCCCccCCccccCCCCCCceE----EE-eeCCCCceeEEe---cCCceEEecCCCCcEEEEccch
Q 043251 202 ALQLNSYPSCPEPNRAVGLAPHTDTSLIT----IL-HENSIAGLQIFK---QEVGWVSVKPVDGALVVNVGDL 266 (342)
Q Consensus 202 ~lrl~~YP~~~~~~~~~g~~~HtD~g~lT----lL-~qd~~~GLqV~~---~~g~W~~V~p~~g~~vVniGd~ 266 (342)
..-+|+|++. -+++.|.|-.-+. |. +.=+.+...... +++..+.+.-.+|.++|.-|+.
T Consensus 96 ~~LvN~Y~~G------d~mg~H~D~~e~~~~~pI~SvSLG~~r~F~~~~~~~~~~~~~l~L~sGsllvM~G~s 162 (169)
T TIGR00568 96 ACLVNRYAPG------ATLSLHQDRDEPDLRAPLLSVSLGLPAIFLIGGLKRNDPPKRLRLHSGDVVIMGGES 162 (169)
T ss_pred EEEEEeecCC------CccccccccccccCCCCEEEEeCCCCEEEEecCCcCCCceEEEEeCCCCEEEECCch
Confidence 3568999864 2689999953221 11 111222222222 2245888999999999998873
No 61
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=29.79 E-value=4.9e+02 Score=24.68 Aligned_cols=47 Identities=21% Similarity=0.239 Sum_probs=31.3
Q ss_pred EEecCCCCcEEEEccchhhhhhCCc-cCCcccccccCCCCCeeEEEEeeCCC
Q 043251 250 VSVKPVDGALVVNVGDLFHILSNAR-FPNVLHRVSVNQKRQRLSLAYFYNPP 300 (342)
Q Consensus 250 ~~V~p~~g~~vVniGd~L~~~TnG~-~ks~~HRV~~~~~~~R~Si~~F~~P~ 300 (342)
+.|+|..|..|+.-= ...||. =..++|.+..--.++++++...++-.
T Consensus 206 l~VkPkkG~ALlF~n----l~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~~ 253 (310)
T PLN00052 206 LAVKPVKGDAVLFFS----LHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHIR 253 (310)
T ss_pred eEeccCcceEEEEec----cCCCCCCCcccccCCCeeecCeEEEEEEeeecc
Confidence 788999988776432 112443 25678887654456899998888764
No 62
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=29.62 E-value=50 Score=29.31 Aligned_cols=71 Identities=20% Similarity=0.281 Sum_probs=44.3
Q ss_pred hHhhhcCC-----CCCCcccccccCCCC-CCCCCCcCCCCCCCCCCCCCCceeeCCC---hHHHHHHHHHHHhccEEEEE
Q 043251 8 SEAYREHP-----LHPHHIIPIDFNSVC-SLPESHKWPKFDDLYDNKISVPVIDLRD---PRVAQLIGRACEKWGVFQLI 78 (342)
Q Consensus 8 ~~~~~~~~-----~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~iPvIDls~---~~~~~~l~~A~~~~GFF~l~ 78 (342)
...||..| +|.||.....++... .+|... .... ......||++.+.. .+.++.+.+++.+...+.|.
T Consensus 77 ~~iy~~rpdv~avvH~H~~~~~~~~~~~~~lp~~~--~~~~--~~~~~~i~~v~y~~~gs~~la~~v~~~~~~~~~vLL~ 152 (214)
T TIGR01086 77 LMAYYQRRPDNAVVHNHHIVCATASILLKRIPAIH--YMVA--ASGGGNIPCVPYATFGSTKLASEVVAGILKSKAILLL 152 (214)
T ss_pred HHHHHhCCCCCEEEeCCCHHHHHHHHcCCCCCcch--HHHH--HhcCCCccccCCCCCChHHHHHHHHHHhhhCCEEehh
Confidence 45687765 588887765555432 233211 0000 00123488887764 46788888888889999999
Q ss_pred cCCC
Q 043251 79 YHGI 82 (342)
Q Consensus 79 nhGi 82 (342)
|||+
T Consensus 153 nHG~ 156 (214)
T TIGR01086 153 HHGL 156 (214)
T ss_pred cCCC
Confidence 9996
No 63
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=28.32 E-value=86 Score=29.36 Aligned_cols=31 Identities=19% Similarity=0.170 Sum_probs=25.8
Q ss_pred HHHHHHHhccEEEEEcCCCChHHHHHHHHHHHH
Q 043251 64 LIGRACEKWGVFQLIYHGIPLNVLKDAESEARR 96 (342)
Q Consensus 64 ~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~ 96 (342)
...+++++.|||.|.| +|..++.++.+....
T Consensus 16 ~Al~~lED~Gy~cvDN--lP~~Ll~~l~~~~~~ 46 (284)
T PF03668_consen 16 TALRALEDLGYYCVDN--LPPSLLPQLIELLAQ 46 (284)
T ss_pred HHHHHHHhcCeeEEcC--CcHHHHHHHHHHHHh
Confidence 4568999999999998 888999988876553
No 64
>PF11243 DUF3045: Protein of unknown function (DUF3045); InterPro: IPR021405 This entry is represented by Bacteriophage T4, Gp30.1; it is a family of uncharacterised viral proteins.
Probab=28.27 E-value=48 Score=24.61 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=17.8
Q ss_pred HHHHHHHHhccEEEEEcCCCC
Q 043251 63 QLIGRACEKWGVFQLIYHGIP 83 (342)
Q Consensus 63 ~~l~~A~~~~GFF~l~nhGi~ 83 (342)
+.|..-|.+.||.||.-|-+.
T Consensus 36 ~~if~eCVeqGFiYVs~~~~~ 56 (89)
T PF11243_consen 36 EPIFKECVEQGFIYVSKYWMD 56 (89)
T ss_pred cHHHHHHHhcceEEEEeeeec
Confidence 578899999999999877553
No 65
>KOG2631 consensus Class II aldolase/adducin N-terminal domain protein [Carbohydrate transport and metabolism]
Probab=27.45 E-value=1.7e+02 Score=26.11 Aligned_cols=61 Identities=21% Similarity=0.296 Sum_probs=40.1
Q ss_pred CCCCCCCceeeCCC--hHHHHHHHHHHHhc---cEEEEEcCCCC-----hHHHHHHHHHHHHhcCCCHHHH
Q 043251 45 YDNKISVPVIDLRD--PRVAQLIGRACEKW---GVFQLIYHGIP-----LNVLKDAESEARRLFSLPSRQK 105 (342)
Q Consensus 45 ~~~~~~iPvIDls~--~~~~~~l~~A~~~~---GFF~l~nhGi~-----~~l~~~~~~~~~~fF~lP~e~K 105 (342)
..+...||+|+=.. .+..+.|.+|...+ -.+.|.||||= .+-.+-+-++-.-+|++..+-|
T Consensus 151 y~D~L~vPIIeNt~~E~~L~D~l~~aie~YP~tcAVLVR~HGvyvWG~TWekaKt~~EcydYLfelaikm~ 221 (238)
T KOG2631|consen 151 YFDTLVVPIIENTPSESDLKDSLKKAIELYPDTCAVLVRRHGVYVWGPTWEKAKTMTECYDYLFELAIKMK 221 (238)
T ss_pred ccceEEEeeecCCchHHHHHHHHHHHHHhCCcceEEEEecCcEEEecCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677899998754 25667888888876 46778899972 3334444455556777655544
No 66
>PLN02775 Probable dihydrodipicolinate reductase
Probab=26.40 E-value=1.3e+02 Score=28.21 Aligned_cols=40 Identities=18% Similarity=0.044 Sum_probs=33.2
Q ss_pred CCCceeeCCChHHHHHHHHHHHhccEEEEEcC-CCChHHHH
Q 043251 49 ISVPVIDLRDPRVAQLIGRACEKWGVFQLIYH-GIPLNVLK 88 (342)
Q Consensus 49 ~~iPvIDls~~~~~~~l~~A~~~~GFF~l~nh-Gi~~~l~~ 88 (342)
.+.=+|||+.++...+..+.|.+.|.=.|++- |.+.+.++
T Consensus 80 ~~~VvIDFT~P~a~~~~~~~~~~~g~~~VvGTTG~~~e~l~ 120 (286)
T PLN02775 80 PNLIVVDYTLPDAVNDNAELYCKNGLPFVMGTTGGDRDRLL 120 (286)
T ss_pred CCEEEEECCChHHHHHHHHHHHHCCCCEEEECCCCCHHHHH
Confidence 44468999999999999999999999888886 88877444
No 67
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=25.98 E-value=76 Score=27.64 Aligned_cols=33 Identities=18% Similarity=0.263 Sum_probs=26.1
Q ss_pred CCceeeCC--ChHHHHHHHHHHH---hccEEEEEcCCC
Q 043251 50 SVPVIDLR--DPRVAQLIGRACE---KWGVFQLIYHGI 82 (342)
Q Consensus 50 ~iPvIDls--~~~~~~~l~~A~~---~~GFF~l~nhGi 82 (342)
.||+++.. ..+.++.+.++++ +...+.|.|||+
T Consensus 126 ~vp~~~~~~gs~ela~~~~~~l~~~~~~~avll~nHGv 163 (193)
T TIGR03328 126 TIPIFENTQDIARLADSVAPYLEAYPDVPGVLIRGHGL 163 (193)
T ss_pred EEeeecCCCChHHHHHHHHHHHhcCCCCCEEEEcCCcc
Confidence 59999752 2467888888886 468999999996
No 68
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=25.19 E-value=68 Score=28.55 Aligned_cols=71 Identities=17% Similarity=0.188 Sum_probs=42.5
Q ss_pred hHhhhcCC-----CCCCcccccccCCC-CCCCCCCcCCCCCCCCCCCCCCceeeCCC---hHHHHHHHHHH--HhccEEE
Q 043251 8 SEAYREHP-----LHPHHIIPIDFNSV-CSLPESHKWPKFDDLYDNKISVPVIDLRD---PRVAQLIGRAC--EKWGVFQ 76 (342)
Q Consensus 8 ~~~~~~~~-----~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~iPvIDls~---~~~~~~l~~A~--~~~GFF~ 76 (342)
.+.||..| +|.|-.-...++.. ..+|... ..... .-...||++.+.. .+.++.+.+++ .+...+.
T Consensus 86 ~~iy~~~pdv~aVvH~H~~~~~a~a~~~~~~p~~~-~~~~~---~~~~~ip~~~y~~~g~~ela~~i~~~l~~~~~~~vl 161 (221)
T PRK06557 86 LYVYRHMPDVGGVVHTHSTYATAWAARGEPIPCVL-TAMAD---EFGGPIPVGPFALIGDEAIGKGIVETLKGGRSPAVL 161 (221)
T ss_pred HHHHHhCCCCCEEEeeCcHHHHHHHHhCCCCChhH-HHHHH---HhCCCeeccCCcCCCcHHHHHHHHHHhCcCCCCEEE
Confidence 46788877 36655444333332 2344221 11100 0124689988763 46778888888 7788999
Q ss_pred EEcCCC
Q 043251 77 LIYHGI 82 (342)
Q Consensus 77 l~nhGi 82 (342)
|.|||+
T Consensus 162 l~nHG~ 167 (221)
T PRK06557 162 MQNHGV 167 (221)
T ss_pred ECCCCc
Confidence 999996
No 69
>PRK06357 hypothetical protein; Provisional
Probab=25.15 E-value=95 Score=27.68 Aligned_cols=33 Identities=24% Similarity=0.542 Sum_probs=24.7
Q ss_pred CCceeeCC---ChHHHHHHHHHHHhc------cEEEEEcCCC
Q 043251 50 SVPVIDLR---DPRVAQLIGRACEKW------GVFQLIYHGI 82 (342)
Q Consensus 50 ~iPvIDls---~~~~~~~l~~A~~~~------GFF~l~nhGi 82 (342)
.||++.+. ..+.++.+.+++++. ..+.|.|||+
T Consensus 130 ~i~~~p~~~~gs~ela~~v~~~l~~~~~~~~~~~vLl~nHGv 171 (216)
T PRK06357 130 KIPTLPFAPATSPELAEIVRKHLIELGDKAVPSAFLLNSHGI 171 (216)
T ss_pred CcceecccCCCcHHHHHHHHHHHhhcCcccCCCEEEECCCCC
Confidence 47777665 346777788888764 5899999996
No 70
>PRK09553 tauD taurine dioxygenase; Reviewed
Probab=24.69 E-value=1.3e+02 Score=27.73 Aligned_cols=49 Identities=18% Similarity=0.106 Sum_probs=36.5
Q ss_pred CCCceeeCCC---hHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCC
Q 043251 49 ISVPVIDLRD---PRVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSL 100 (342)
Q Consensus 49 ~~iPvIDls~---~~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~l 100 (342)
+.|-=+||++ .+..++|.+|+.++|+..+.|..++. ++..+.++.|-.+
T Consensus 14 aev~g~dl~~~l~~~~~~~l~~~l~~~Gvlvfr~q~l~~---~~~~~~~~~~G~~ 65 (277)
T PRK09553 14 AQISGIDLTRPLSDNQFEQLYHALLRHQVLFFRDQPITP---QQQRDLAARFGDL 65 (277)
T ss_pred eEEeCcccCCcCCHHHHHHHHHHHHHCCEEEECCCCCCH---HHHHHHHHHhCCC
Confidence 4556677864 36789999999999999999988764 4455666676653
No 71
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=24.11 E-value=51 Score=29.06 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=25.8
Q ss_pred CCCceeeCCCh-----HHHHHHHHHHHhccEEEEEcCCC
Q 043251 49 ISVPVIDLRDP-----RVAQLIGRACEKWGVFQLIYHGI 82 (342)
Q Consensus 49 ~~iPvIDls~~-----~~~~~l~~A~~~~GFF~l~nhGi 82 (342)
..||++++..+ +.++.+.+++.+.-.+.|.|||+
T Consensus 121 ~~ip~~~~~~~~~~~~~la~~~~~~l~~~~~vll~nHG~ 159 (209)
T cd00398 121 GDIPCTPYMTPETGEDEIGTQRALGFPNSKAVLLRNHGL 159 (209)
T ss_pred CCeeecCCcCCCccHHHHHHHHhcCCCcCCEEEEcCCCC
Confidence 46999998754 44556666667788999999996
No 72
>PRK05834 hypothetical protein; Provisional
Probab=23.26 E-value=88 Score=27.42 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=25.1
Q ss_pred CCceeeCCCh-----HHHHHHHHHHHhcc--EEEEEcCCC
Q 043251 50 SVPVIDLRDP-----RVAQLIGRACEKWG--VFQLIYHGI 82 (342)
Q Consensus 50 ~iPvIDls~~-----~~~~~l~~A~~~~G--FF~l~nhGi 82 (342)
.||++++.++ ..++.+.+++++.. .+.|.|||+
T Consensus 121 ~ipv~~~~~~~~~~~~la~~v~~~l~~~~~~avLL~nHGv 160 (194)
T PRK05834 121 EISIYDPKDFDDWYERADTEILRYLQEKNKNFVVIKGYGV 160 (194)
T ss_pred eeeecCccccchHHHhHHHHHHHHHhhcCCCEEEEcCCcc
Confidence 4899876543 24577888888755 999999995
No 73
>COG4895 Uncharacterized conserved protein [Function unknown]
Probab=21.33 E-value=54 Score=22.57 Aligned_cols=23 Identities=22% Similarity=0.275 Sum_probs=17.0
Q ss_pred chhHhhhcCCCCCCcccccccCC
Q 043251 6 TLSEAYREHPLHPHHIIPIDFNS 28 (342)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~ 28 (342)
+.....-..|.|||-|+.-..+|
T Consensus 32 vVk~iLT~S~~HPHGIKVrL~dG 54 (63)
T COG4895 32 VVKAILTRSPSHPHGIKVRLTDG 54 (63)
T ss_pred HHHHHHhCCCCCCCceEEEeecC
Confidence 34445567899999999876666
No 74
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=20.19 E-value=1.6e+02 Score=20.57 Aligned_cols=38 Identities=21% Similarity=0.345 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHhcc--EEEEEc------CCCChHHHHHHHHHHHH
Q 043251 59 PRVAQLIGRACEKWG--VFQLIY------HGIPLNVLKDAESEARR 96 (342)
Q Consensus 59 ~~~~~~l~~A~~~~G--FF~l~n------hGi~~~l~~~~~~~~~~ 96 (342)
.+.+..|.+.++++| .+.++. +||+.+.+.++++..++
T Consensus 23 ~~~l~~la~ia~~yg~~~irlT~~Q~l~l~~v~~~~~~~i~~~L~~ 68 (69)
T PF03460_consen 23 AEQLRALAEIAEKYGDGEIRLTTRQNLQLRGVPEENLPAIFEELKE 68 (69)
T ss_dssp HHHHHHHHHHHHHHSTSEEEEETTSCEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEECCCCeEEEeCCCHHHHHHHHHHHHc
Confidence 467788888898887 777664 56888888888776543
No 75
>PF01471 PG_binding_1: Putative peptidoglycan binding domain; InterPro: IPR002477 This entry represents peptidoglycan binding domain (PGBD), as well as related domains that share the same structure. PGBD may have a general peptidoglycan binding function, has a core structure consisting of a closed, three-helical bundle with a left-handed twist. It is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [, , ]. Examples are: Muramoyl-pentapeptide carboxypeptidase (3.4.17.8 from EC) N-acetylmuramoyl-L-alanine amidase cwlA precursor (cell wall hydrolase, autolysin, 3.5.1.28 from EC) Autolytic lysozyme (1,4-beta-N-acetylmuramidase, autolysin, 3.2.1.17 from EC) Membrane-bound lytic murein transglycosylase B Zinc-containing D-alanyl-D-alanine-cleaving carboxypeptidase, VanX []. Many of the proteins having this domain are as yet uncharacterised. However, some are known to belong to MEROPS peptidase family M15 (clan MD), subfamily M15A metallopeptidases. A number of the proteins belonging to subfamily M15A are non-peptidase homologues as they either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Eukaryotic enzymes can contain structurally similar PGBD-like domains. Matrix metalloproteinases (MMP), which catalyse extracellular matrix degradation, have N-terminal domains that resemble PGBD. Examples are gelatinase A (MMP-2), which degrades type IV collagen [], stromelysin-1 (MMP-3), which plays a role in arthritis and tumour invasion [, ], and gelatinase B (MMP-9) secreted by neutrophils as part of the innate immune defence mechanism []. Several MMPs are implicated in cancer progression, since degradation of the extracellular matrix is an essential step in the cascade of metastasis [].; GO: 0008152 metabolic process; PDB: 1L6J_A 3BKH_A 3BKV_A 1GXD_A 1EAK_D 1CK7_A 1SLM_A 1LBU_A 1SU3_B.
Probab=20.02 E-value=1.1e+02 Score=20.49 Aligned_cols=42 Identities=14% Similarity=0.130 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHhcCCC
Q 043251 60 RVAQLIGRACEKWGVFQLIYHGIPLNVLKDAESEARRLFSLP 101 (342)
Q Consensus 60 ~~~~~l~~A~~~~GFF~l~nhGi~~~l~~~~~~~~~~fF~lP 101 (342)
+.+..|...+...||......|+-...+.+++...+..+.|+
T Consensus 3 ~~v~~lq~~L~~~gy~~~~~~g~~~~~t~~Av~~fQ~~~gL~ 44 (57)
T PF01471_consen 3 PDVKALQQYLNRLGYYPGPVDGIFDPETREAVKAFQKANGLP 44 (57)
T ss_dssp HHHHHHHHHHHHTTTT-SSTTSBSHHHHHHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCcCHHHHHHHHHHHHHcCcC
Confidence 346788899999999844444555566666666667766654
Done!