Query 043256
Match_columns 224
No_of_seqs 235 out of 1486
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 04:45:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043256.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043256hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 3.8E-40 1.3E-44 291.6 18.9 215 3-223 5-232 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.3E-32 8E-37 243.8 16.9 216 7-223 1-242 (482)
3 2acv_A Triterpene UDP-glucosyl 100.0 1.3E-30 4.4E-35 231.6 14.6 205 13-223 8-228 (463)
4 2c1x_A UDP-glucose flavonoid 3 100.0 1.1E-29 3.7E-34 225.2 18.8 209 13-223 6-230 (456)
5 2vch_A Hydroquinone glucosyltr 100.0 3.5E-29 1.2E-33 223.3 20.7 206 13-223 5-223 (480)
6 2iya_A OLEI, oleandomycin glyc 99.8 6.5E-18 2.2E-22 147.4 12.9 123 14-143 12-141 (424)
7 4amg_A Snogd; transferase, pol 99.6 1.1E-15 3.8E-20 131.7 12.9 123 13-142 21-159 (400)
8 1iir_A Glycosyltransferase GTF 99.6 1.1E-14 3.6E-19 126.9 10.4 122 15-142 1-127 (415)
9 2iyf_A OLED, oleandomycin glyc 99.5 1.9E-13 6.6E-18 119.0 13.2 121 15-142 8-135 (430)
10 3ia7_A CALG4; glycosysltransfe 99.5 2.9E-13 9.8E-18 116.4 11.5 120 15-140 5-132 (402)
11 3rsc_A CALG2; TDP, enediyne, s 99.5 2.4E-13 8.3E-18 117.7 10.2 121 14-140 20-148 (415)
12 1rrv_A Glycosyltransferase GTF 99.4 2.2E-13 7.7E-18 118.4 9.7 122 15-142 1-128 (416)
13 2p6p_A Glycosyl transferase; X 99.3 8.3E-12 2.8E-16 107.0 10.7 121 15-141 1-137 (384)
14 2yjn_A ERYCIII, glycosyltransf 99.3 1.6E-11 5.5E-16 107.5 9.9 123 14-142 20-175 (441)
15 3oti_A CALG3; calicheamicin, T 99.2 4.2E-11 1.4E-15 103.3 11.7 121 14-141 20-160 (398)
16 4fzr_A SSFS6; structural genom 99.2 3.7E-11 1.3E-15 103.5 9.0 123 13-141 14-153 (398)
17 3h4t_A Glycosyltransferase GTF 99.2 2.3E-11 7.7E-16 105.6 6.7 121 15-143 1-127 (404)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.2 1E-10 3.4E-15 100.4 9.8 121 15-141 2-144 (391)
19 3otg_A CALG1; calicheamicin, T 99.0 1.3E-09 4.4E-14 93.9 10.5 123 13-141 19-160 (412)
20 3s2u_A UDP-N-acetylglucosamine 98.5 3.7E-07 1.2E-11 78.1 9.7 114 15-138 3-121 (365)
21 1f0k_A MURG, UDP-N-acetylgluco 97.7 0.00024 8.2E-09 59.6 10.2 116 15-140 7-127 (364)
22 3fro_A GLGA glycogen synthase; 96.1 0.13 4.5E-06 43.4 13.8 39 14-52 2-45 (439)
23 3c48_A Predicted glycosyltrans 95.4 0.075 2.6E-06 45.2 9.1 122 13-140 19-153 (438)
24 3okp_A GDP-mannose-dependent a 94.1 0.18 6.1E-06 42.0 8.1 105 14-138 4-115 (394)
25 2r60_A Glycosyl transferase, g 93.7 0.61 2.1E-05 40.5 11.1 120 14-140 7-151 (499)
26 2jjm_A Glycosyl transferase, g 93.5 0.96 3.3E-05 37.7 11.7 112 14-140 15-133 (394)
27 1v4v_A UDP-N-acetylglucosamine 89.3 2 6.7E-05 35.5 9.0 110 15-139 6-122 (376)
28 3s28_A Sucrose synthase 1; gly 85.5 1 3.4E-05 42.4 5.4 119 15-138 279-436 (816)
29 1vgv_A UDP-N-acetylglucosamine 84.3 3.5 0.00012 33.9 7.8 111 16-140 2-118 (384)
30 2iw1_A Lipopolysaccharide core 82.9 1.3 4.3E-05 36.4 4.5 83 16-118 2-87 (374)
31 2iuy_A Avigt4, glycosyltransfe 80.4 2.1 7.2E-05 34.8 4.9 79 25-137 30-108 (342)
32 2x6q_A Trehalose-synthase TRET 80.0 2.5 8.6E-05 35.4 5.4 40 13-52 39-80 (416)
33 2x0d_A WSAF; GT4 family, trans 79.6 1.3 4.5E-05 37.8 3.5 40 13-52 45-89 (413)
34 3hbm_A UDP-sugar hydrolase; PS 78.8 4.5 0.00015 32.8 6.3 86 23-140 13-101 (282)
35 2gek_A Phosphatidylinositol ma 77.6 3.1 0.0001 34.5 5.2 113 14-140 20-138 (406)
36 3vue_A GBSS-I, granule-bound s 77.3 2.9 0.0001 37.1 5.2 40 12-51 7-52 (536)
37 4hwg_A UDP-N-acetylglucosamine 77.0 4.8 0.00017 34.0 6.3 110 16-139 11-124 (385)
38 2yxb_A Coenzyme B12-dependent 76.4 3.1 0.00011 30.7 4.3 41 12-52 16-56 (161)
39 1rzu_A Glycogen synthase 1; gl 73.0 3.9 0.00013 35.0 4.7 36 16-51 2-43 (485)
40 1y80_A Predicted cobalamin bin 72.3 5.9 0.0002 30.3 5.2 44 13-56 87-130 (210)
41 2wqk_A 5'-nucleotidase SURE; S 72.3 9.8 0.00033 30.3 6.6 108 16-140 3-127 (251)
42 2i2x_B MTAC, methyltransferase 71.8 7 0.00024 31.1 5.7 42 13-54 122-163 (258)
43 2qzs_A Glycogen synthase; glyc 71.3 4.7 0.00016 34.5 4.8 36 16-51 2-43 (485)
44 1ccw_A Protein (glutamate muta 68.5 9.3 0.00032 27.2 5.2 41 14-54 3-43 (137)
45 1mvl_A PPC decarboxylase athal 66.8 13 0.00044 28.8 6.0 43 14-58 19-61 (209)
46 3ezx_A MMCP 1, monomethylamine 63.9 10 0.00034 29.4 4.9 44 13-56 91-134 (215)
47 4g6h_A Rotenone-insensitive NA 60.9 6.5 0.00022 34.5 3.7 36 11-51 39-74 (502)
48 3dzc_A UDP-N-acetylglucosamine 59.7 12 0.00041 31.5 5.1 111 15-139 26-142 (396)
49 1pno_A NAD(P) transhydrogenase 59.1 15 0.00051 27.4 4.7 35 15-51 24-63 (180)
50 1d4o_A NADP(H) transhydrogenas 58.3 16 0.00053 27.4 4.7 35 15-51 23-62 (184)
51 1lss_A TRK system potassium up 57.3 16 0.00056 25.0 4.7 33 14-51 4-36 (140)
52 2hy7_A Glucuronosyltransferase 56.5 9.9 0.00034 32.0 4.0 37 13-51 13-52 (406)
53 2fsv_C NAD(P) transhydrogenase 56.2 17 0.00058 27.7 4.7 35 15-51 47-86 (203)
54 1djl_A Transhydrogenase DIII; 55.8 17 0.00059 27.7 4.7 35 15-51 46-85 (207)
55 2bru_C NAD(P) transhydrogenase 54.2 17 0.00057 27.3 4.3 35 15-51 31-70 (186)
56 2r8r_A Sensor protein; KDPD, P 54.1 22 0.00075 27.9 5.3 40 13-52 5-44 (228)
57 3ot5_A UDP-N-acetylglucosamine 53.3 15 0.0005 31.1 4.5 112 14-139 27-145 (403)
58 3zqu_A Probable aromatic acid 53.1 24 0.00081 27.2 5.3 41 14-55 4-44 (209)
59 1id1_A Putative potassium chan 52.5 11 0.00038 26.8 3.2 33 14-51 3-35 (153)
60 3lyu_A Putative hydrogenase; t 50.7 16 0.00054 26.0 3.7 37 15-54 19-55 (142)
61 3vot_A L-amino acid ligase, BL 50.4 60 0.0021 27.2 8.0 96 13-135 4-101 (425)
62 1psw_A ADP-heptose LPS heptosy 50.2 97 0.0033 24.8 11.3 99 16-137 2-106 (348)
63 3qjg_A Epidermin biosynthesis 50.1 28 0.00096 26.0 5.2 41 16-57 7-47 (175)
64 2q5c_A NTRC family transcripti 48.2 14 0.00047 28.1 3.2 43 101-146 130-174 (196)
65 4dzz_A Plasmid partitioning pr 47.3 73 0.0025 23.2 7.3 32 21-52 9-40 (206)
66 3mc3_A DSRE/DSRF-like family p 47.1 25 0.00087 24.7 4.3 30 25-54 29-58 (134)
67 3p9x_A Phosphoribosylglycinami 46.0 15 0.0005 28.5 3.1 31 111-141 31-61 (211)
68 4b4o_A Epimerase family protei 45.7 14 0.00047 29.4 3.0 32 16-51 2-33 (298)
69 1p3y_1 MRSD protein; flavoprot 45.2 26 0.00089 26.6 4.3 41 15-56 9-49 (194)
70 2lpm_A Two-component response 44.7 20 0.0007 24.9 3.4 33 105-138 48-85 (123)
71 2pju_A Propionate catabolism o 44.5 23 0.00077 27.6 4.0 38 100-140 141-180 (225)
72 3to5_A CHEY homolog; alpha(5)b 44.1 29 0.00098 24.4 4.2 32 111-142 57-97 (134)
73 1g5t_A COB(I)alamin adenosyltr 43.4 33 0.0011 26.1 4.7 101 8-121 22-130 (196)
74 4ds3_A Phosphoribosylglycinami 42.9 30 0.001 26.6 4.5 30 111-140 36-65 (209)
75 3lqk_A Dipicolinate synthase s 42.2 36 0.0012 26.0 4.8 40 15-55 8-48 (201)
76 3kkj_A Amine oxidase, flavin-c 41.6 15 0.00051 27.4 2.6 18 32-49 15-32 (336)
77 1g63_A Epidermin modifying enz 40.5 39 0.0013 25.3 4.7 41 16-57 4-44 (181)
78 3bul_A Methionine synthase; tr 40.4 33 0.0011 30.8 4.8 44 13-56 97-140 (579)
79 3gl9_A Response regulator; bet 40.0 48 0.0016 21.8 4.8 32 111-142 46-86 (122)
80 3p0j_A Tyrosyl-tRNA synthetase 39.7 39 0.0013 31.0 5.3 41 13-53 381-426 (690)
81 1sbz_A Probable aromatic acid 38.7 46 0.0016 25.3 4.8 39 16-55 2-41 (197)
82 3lrx_A Putative hydrogenase; a 38.2 26 0.00089 25.3 3.3 37 15-54 24-60 (158)
83 3kcq_A Phosphoribosylglycinami 38.1 44 0.0015 25.8 4.7 30 111-140 37-66 (215)
84 1kjn_A MTH0777; hypotethical p 37.7 42 0.0014 24.5 4.2 44 15-58 7-52 (157)
85 3fwz_A Inner membrane protein 37.5 24 0.00083 24.6 3.0 34 14-52 7-40 (140)
86 3mcu_A Dipicolinate synthase, 37.4 35 0.0012 26.3 4.0 39 15-54 6-45 (207)
87 3pdi_B Nitrogenase MOFE cofact 36.7 42 0.0015 29.0 4.9 31 103-137 368-398 (458)
88 2gk4_A Conserved hypothetical 36.6 27 0.00094 27.3 3.3 21 32-52 33-53 (232)
89 3oy2_A Glycosyltransferase B73 36.4 41 0.0014 27.7 4.7 37 16-53 2-41 (413)
90 3eag_A UDP-N-acetylmuramate:L- 34.8 46 0.0016 27.0 4.7 32 15-50 5-36 (326)
91 3beo_A UDP-N-acetylglucosamine 34.2 43 0.0015 27.0 4.4 113 14-140 8-127 (375)
92 4hb9_A Similarities with proba 33.5 34 0.0011 28.1 3.7 29 15-48 2-30 (412)
93 3qxc_A Dethiobiotin synthetase 32.5 56 0.0019 25.6 4.6 34 16-49 22-57 (242)
94 2ejb_A Probable aromatic acid 31.9 70 0.0024 24.0 4.9 39 16-55 3-41 (189)
95 2g1u_A Hypothetical protein TM 31.9 65 0.0022 22.6 4.6 33 14-51 19-51 (155)
96 4e5v_A Putative THUA-like prot 31.7 70 0.0024 25.6 5.1 39 12-51 2-43 (281)
97 3ot1_A 4-methyl-5(B-hydroxyeth 31.4 96 0.0033 23.2 5.7 36 15-51 10-45 (208)
98 1rkx_A CDP-glucose-4,6-dehydra 31.3 50 0.0017 26.7 4.3 42 1-51 1-42 (357)
99 1p9o_A Phosphopantothenoylcyst 30.7 32 0.0011 28.3 2.9 22 32-53 69-90 (313)
100 1qzu_A Hypothetical protein MD 30.6 58 0.002 24.9 4.3 44 14-58 19-63 (206)
101 3t6k_A Response regulator rece 30.6 1E+02 0.0035 20.6 5.3 32 111-142 48-88 (136)
102 3k9g_A PF-32 protein; ssgcid, 29.7 56 0.0019 25.3 4.2 39 13-52 25-65 (267)
103 1pq4_A Periplasmic binding pro 29.4 82 0.0028 25.2 5.2 39 111-149 237-277 (291)
104 3tov_A Glycosyl transferase fa 29.1 2.3E+02 0.0079 22.9 11.9 103 14-137 8-115 (349)
105 3m6m_D Sensory/regulatory prot 28.8 80 0.0027 21.4 4.6 31 111-141 58-99 (143)
106 3ew7_A LMO0794 protein; Q8Y8U8 27.4 42 0.0015 24.8 3.0 32 16-51 2-33 (221)
107 3tqr_A Phosphoribosylglycinami 27.3 51 0.0017 25.4 3.4 30 111-140 33-62 (215)
108 2qs7_A Uncharacterized protein 27.2 82 0.0028 22.3 4.3 31 24-54 18-48 (144)
109 3pdi_A Nitrogenase MOFE cofact 27.0 59 0.002 28.3 4.2 33 103-139 394-426 (483)
110 1meo_A Phosophoribosylglycinam 26.5 75 0.0026 24.2 4.3 30 111-140 29-58 (209)
111 1u7z_A Coenzyme A biosynthesis 26.5 52 0.0018 25.6 3.4 20 32-51 38-57 (226)
112 3e8x_A Putative NAD-dependent 26.5 44 0.0015 25.2 3.0 33 15-51 22-54 (236)
113 3f6p_A Transcriptional regulat 26.3 1.2E+02 0.0041 19.6 5.0 36 106-142 42-83 (120)
114 2ts1_A Tyrosyl-tRNA synthetase 26.0 63 0.0021 27.7 4.1 33 19-52 37-72 (419)
115 1uxo_A YDEN protein; hydrolase 25.9 1E+02 0.0035 21.8 4.8 38 14-51 4-42 (192)
116 2gt1_A Lipopolysaccharide hept 25.8 70 0.0024 25.5 4.2 43 16-58 2-46 (326)
117 2r6j_A Eugenol synthase 1; phe 25.7 72 0.0025 25.2 4.3 33 16-52 13-45 (318)
118 4ao6_A Esterase; hydrolase, th 25.6 89 0.003 23.9 4.7 38 15-52 56-95 (259)
119 3dm5_A SRP54, signal recogniti 25.6 91 0.0031 26.9 5.0 40 15-54 101-140 (443)
120 3h2s_A Putative NADH-flavin re 25.5 48 0.0016 24.6 3.0 20 32-51 14-33 (224)
121 1y42_X Tyrosyl-tRNA synthetase 25.5 51 0.0017 28.0 3.3 34 19-53 71-107 (392)
122 3da8_A Probable 5'-phosphoribo 25.4 86 0.0029 24.1 4.4 28 111-139 40-67 (215)
123 2qjw_A Uncharacterized protein 25.4 91 0.0031 21.5 4.4 37 13-49 3-40 (176)
124 1mio_B Nitrogenase molybdenum 25.3 75 0.0026 27.3 4.5 32 15-48 170-201 (458)
125 2g36_A Tryptophanyl-tRNA synth 25.0 46 0.0016 27.6 2.9 26 26-51 28-53 (340)
126 4g65_A TRK system potassium up 24.8 28 0.00095 30.1 1.6 35 13-52 2-36 (461)
127 3u7q_A Nitrogenase molybdenum- 24.7 72 0.0025 27.8 4.3 30 105-138 412-441 (492)
128 3f67_A Putative dienelactone h 24.5 1.4E+02 0.0048 21.7 5.5 35 15-50 33-67 (241)
129 3llv_A Exopolyphosphatase-rela 24.4 47 0.0016 22.9 2.6 32 15-51 7-38 (141)
130 3goc_A Endonuclease V; alpha-b 24.4 1E+02 0.0035 24.2 4.7 39 100-138 95-141 (237)
131 3cg0_A Response regulator rece 24.3 1.3E+02 0.0045 19.8 5.0 32 111-142 54-92 (140)
132 4as2_A Phosphorylcholine phosp 24.2 57 0.002 26.8 3.4 24 28-51 145-168 (327)
133 1hdo_A Biliverdin IX beta redu 23.8 55 0.0019 23.7 3.0 32 16-51 5-36 (206)
134 1jil_A Tyrrs, tyrosyl-tRNA syn 23.7 61 0.0021 27.7 3.5 34 19-53 39-75 (420)
135 2fuk_A XC6422 protein; A/B hyd 23.5 1.4E+02 0.0049 21.3 5.4 36 14-49 37-76 (220)
136 2we8_A Xanthine dehydrogenase; 23.4 92 0.0031 26.3 4.6 33 14-51 204-236 (386)
137 1jx7_A Hypothetical protein YC 23.2 1.3E+02 0.0043 19.8 4.6 30 26-55 16-47 (117)
138 3oz2_A Digeranylgeranylglycero 23.0 45 0.0016 27.0 2.6 18 32-49 17-34 (397)
139 3on5_A BH1974 protein; structu 22.9 98 0.0034 25.9 4.6 34 14-53 199-233 (362)
140 3d3k_A Enhancer of mRNA-decapp 22.5 60 0.002 25.7 3.1 35 15-51 86-121 (259)
141 3doj_A AT3G25530, dehydrogenas 22.4 95 0.0032 24.8 4.4 33 14-51 21-53 (310)
142 1l7b_A DNA ligase; BRCT, autos 22.2 86 0.0029 20.5 3.4 39 99-137 23-70 (92)
143 3lou_A Formyltetrahydrofolate 22.2 58 0.002 26.4 3.0 38 100-139 107-150 (292)
144 1jzt_A Hypothetical 27.5 kDa p 22.0 51 0.0018 25.9 2.6 35 15-51 59-94 (246)
145 2rh8_A Anthocyanidin reductase 21.9 1E+02 0.0035 24.4 4.5 32 15-50 10-41 (338)
146 2a33_A Hypothetical protein; s 21.8 1.5E+02 0.0052 22.6 5.2 33 15-47 14-50 (215)
147 2b69_A UDP-glucuronate decarbo 21.6 1E+02 0.0034 24.7 4.4 33 14-50 27-59 (343)
148 1jkx_A GART;, phosphoribosylgl 21.3 71 0.0024 24.4 3.2 30 111-140 29-58 (212)
149 3c3m_A Response regulator rece 21.3 1.8E+02 0.0062 19.2 5.2 35 106-141 43-86 (138)
150 2qr3_A Two-component system re 21.2 1.6E+02 0.0056 19.3 5.0 37 106-143 43-91 (140)
151 3kjh_A CO dehydrogenase/acetyl 21.2 87 0.003 23.5 3.8 37 16-52 2-38 (254)
152 3qha_A Putative oxidoreductase 21.1 74 0.0025 25.3 3.4 33 14-51 15-47 (296)
153 1o97_C Electron transferring f 21.1 1.3E+02 0.0044 23.8 4.8 39 101-140 103-147 (264)
154 3dqp_A Oxidoreductase YLBE; al 21.0 59 0.002 24.1 2.7 20 32-51 14-33 (219)
155 2x5n_A SPRPN10, 26S proteasome 20.7 1.5E+02 0.0052 21.9 5.0 35 16-50 108-143 (192)
156 3n0v_A Formyltetrahydrofolate 20.7 65 0.0022 26.0 3.0 38 100-139 102-145 (286)
157 3d3j_A Enhancer of mRNA-decapp 20.7 67 0.0023 26.2 3.1 35 15-51 133-168 (306)
158 2dkn_A 3-alpha-hydroxysteroid 20.7 72 0.0025 24.1 3.2 19 32-50 15-33 (255)
159 2w36_A Endonuclease V; hypoxan 20.5 1.5E+02 0.0053 22.9 5.0 40 100-139 91-138 (225)
160 2ehd_A Oxidoreductase, oxidore 20.5 74 0.0025 23.9 3.2 20 32-51 19-38 (234)
161 2rjn_A Response regulator rece 20.4 1.6E+02 0.0054 20.0 4.8 33 111-143 51-90 (154)
162 1boo_A Protein (N-4 cytosine-s 20.3 94 0.0032 25.2 4.0 44 101-144 241-286 (323)
163 1dbw_A Transcriptional regulat 20.3 1.5E+02 0.0052 19.1 4.6 32 111-142 47-85 (126)
164 2o1e_A YCDH; alpha-beta protei 20.2 1.3E+02 0.0045 24.3 4.8 24 28-51 28-51 (312)
165 2o8n_A APOA-I binding protein; 20.2 69 0.0024 25.5 3.0 35 15-51 80-115 (265)
166 1yrb_A ATP(GTP)binding protein 20.2 2E+02 0.0068 21.8 5.7 40 13-53 13-52 (262)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=3.8e-40 Score=291.56 Aligned_cols=215 Identities=18% Similarity=0.243 Sum_probs=157.0
Q ss_pred CccccccCCCCCceEEEEeCCCccchHHHHHHHHHHHhCC--CEEEEEecccccccccc-CCCCCCCeEEEEecCCCCCC
Q 043256 3 NNEKKASASSKLANCLVLSYPAQGHINPLLLFSKRLERKG--IKVTIVTTYFISKSLHR-DPSSSISIALETISDGYDKG 79 (224)
Q Consensus 3 ~~~~m~~~~~~~~hvl~~p~p~~GH~~P~l~La~~La~~G--~~VT~~~t~~~~~~~~~-~~~~~~~i~~~~l~~~~~~~ 79 (224)
.|| |++ .+++||+++|||+|||++||++|||+|++|| ++|||++|+.+..++.+ ......+|+|+.+|+++ |+
T Consensus 5 ~~~-M~~--~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdgl-p~ 80 (454)
T 3hbf_A 5 KNE-MNG--NNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGL-PK 80 (454)
T ss_dssp ----------CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCC-CT
T ss_pred ccc-ccC--CCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCC-CC
Confidence 455 554 3578999999999999999999999999999 99999999887776643 11111159999999998 55
Q ss_pred CCCCcCCHHHHHHHHHH----HhHHHHHHHHHhcC-CCcEEEeCCCcccHHHHHHHcCCceEEechhhHHHHHHHHHhhh
Q 043256 80 GSAQAESDQAYVDRFWQ----IGLQTLTELVERMN-DVDCIVFDSFLPWALDVAKKFGLTGAAFLTQSCAVAAIYHHVNK 154 (224)
Q Consensus 80 ~~~~~~~~~~~~~~~~~----~~~~~l~~ll~~~~-~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t~~a~~~~~~~~~~~ 154 (224)
+.+..++....+..+.. .+++.+++++++.. +++|||+|+|++|+.++|+++|||++.|||++++.++++++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~ 160 (454)
T 3hbf_A 81 GYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDL 160 (454)
T ss_dssp TCCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHH
T ss_pred CccccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHH
Confidence 55443332222222222 23444555444433 79999999999999999999999999999999999999988642
Q ss_pred --CCCC--CCCCCCce-eCCCCCCCCCCCCCCCcCCCCCchHHHHHHHHHHhhcccCCCEEEEcChhhhhHhhh
Q 043256 155 --GLIK--LPLIGDEV-LLPGLPPLDPQDTPSFINDSASYPAFFDMIVTRQVSNIDKADWILCNTFYELEKEVI 223 (224)
Q Consensus 155 --~~~~--~~~~~~~~-~~Pglp~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ilvNTf~eLE~~~l 223 (224)
.... ...+++.+ .+||+|+++.+|||.++.. +..+.+++++. ++.+...+++++|+|||+|||++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~-~~~~~~~~~~~vl~ns~~eLE~~~~ 232 (454)
T 3hbf_A 161 IREKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLH-KMGLELPRANAVAINSFATIHPLIE 232 (454)
T ss_dssp HHHTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHH-HHHHHGGGSSCEEESSCGGGCHHHH
T ss_pred HHhhcCCCccccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHH-HHHHhhccCCEEEECChhHhCHHHH
Confidence 1110 01112345 4999999999999998764 33345667777 8888999999999999999999765
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.3e-32 Score=243.84 Aligned_cols=216 Identities=25% Similarity=0.440 Sum_probs=150.8
Q ss_pred cccCCCCCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccC-CC---C-CCCeEEEEecCCCCCCC-
Q 043256 7 KASASSKLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRD-PS---S-SISIALETISDGYDKGG- 80 (224)
Q Consensus 7 m~~~~~~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~-~~---~-~~~i~~~~l~~~~~~~~- 80 (224)
|+....+++||+++|+|++||++||++||++|++|||+|||++++.+..++.+. .. . ..+++|+.+|+++++.+
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~ 80 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEG 80 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC----
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCccc
Confidence 333333467999999999999999999999999999999999999877655431 00 0 01499999998773311
Q ss_pred -CCCcCCHHHHHHHHHHHhHHHHHHHHHhc------CCCcEEEeCCCcccHHHHHHHcCCceEEechhhHHHHHHHHHhh
Q 043256 81 -SAQAESDQAYVDRFWQIGLQTLTELVERM------NDVDCIVFDSFLPWALDVAKKFGLTGAAFLTQSCAVAAIYHHVN 153 (224)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~~~~l~~ll~~~------~~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t~~a~~~~~~~~~~ 153 (224)
.....++..++..+...+.+.++++++++ .++||||+|.++.|+..+|+++|||++.|++++++.++.++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 160 (482)
T 2pq6_A 81 DGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFR 160 (482)
T ss_dssp -----CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHH
T ss_pred ccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHH
Confidence 11122344444444344667888888764 27999999999999999999999999999999998887765542
Q ss_pred ----hCCCCCCC-----C---CCce-eCCCCCCCCCCCCCCCcCCCCCchHHHHHHHHHHhhcccCCCEEEEcChhhhhH
Q 043256 154 ----KGLIKLPL-----I---GDEV-LLPGLPPLDPQDTPSFINDSASYPAFFDMIVTRQVSNIDKADWILCNTFYELEK 220 (224)
Q Consensus 154 ----~~~~~~~~-----~---~~~~-~~Pglp~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ilvNTf~eLE~ 220 (224)
.+..+... . +..+ .+||+++++..++|.++...+..+.+.+.+. +..+...+++++|+|||++||+
T Consensus 161 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vl~nt~~~le~ 239 (482)
T 2pq6_A 161 SFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFI-EVADRVNKDTTILLNTFNELES 239 (482)
T ss_dssp HHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHH-HHHHTCCTTCCEEESSCGGGGH
T ss_pred HHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHH-HHHHhhccCCEEEEcChHHHhH
Confidence 34333211 0 1223 4799988888999977654332334555555 6667788999999999999998
Q ss_pred hhh
Q 043256 221 EVI 223 (224)
Q Consensus 221 ~~l 223 (224)
+++
T Consensus 240 ~~~ 242 (482)
T 2pq6_A 240 DVI 242 (482)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 3
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.97 E-value=1.3e-30 Score=231.57 Aligned_cols=205 Identities=19% Similarity=0.270 Sum_probs=148.8
Q ss_pred CCceEEEEeCCCccchHHHHHHHHHHHhC--CCEEEEEeccccccc-----ccc-CCCCCCCeEEEEecCCCCCCCCCCc
Q 043256 13 KLANCLVLSYPAQGHINPLLLFSKRLERK--GIKVTIVTTYFISKS-----LHR-DPSSSISIALETISDGYDKGGSAQA 84 (224)
Q Consensus 13 ~~~hvl~~p~p~~GH~~P~l~La~~La~~--G~~VT~~~t~~~~~~-----~~~-~~~~~~~i~~~~l~~~~~~~~~~~~ 84 (224)
+++||+++|+|++||++||++||++|++| ||+|||++|+.+..+ +.+ ..... +|+|+.+|++..++ .+..
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~-~i~~~~lp~~~~~~-~~~~ 85 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQP-QIQLIDLPEVEPPP-QELL 85 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCT-TEEEEECCCCCCCC-GGGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCC-CceEEECCCCCCCc-cccc
Confidence 45799999999999999999999999999 999999999876421 111 01111 49999999752132 2111
Q ss_pred CCHHHHHHHHHHHhHHHHHHHHHhc--CCCcEEEeCCCcccHHHHHHHcCCceEEechhhHHHHHHHHHhhhCCC--CCC
Q 043256 85 ESDQAYVDRFWQIGLQTLTELVERM--NDVDCIVFDSFLPWALDVAKKFGLTGAAFLTQSCAVAAIYHHVNKGLI--KLP 160 (224)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~~--~~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t~~a~~~~~~~~~~~~~~--~~~ 160 (224)
.+....+......+.+.++++++++ .++||||+|.++.|+.++|+++|||+++||+++++.++++++++.... +..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (463)
T 2acv_A 86 KSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFD 165 (463)
T ss_dssp GSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCCC
T ss_pred CCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCCCC
Confidence 2221112222334567888999873 289999999999999999999999999999999999998888754221 111
Q ss_pred CCCC---ceeCCCC-CCCCCCCCCCCcCCCCCchHHHHHHHHHHhhcccCCCEEEEcChhhhhHhhh
Q 043256 161 LIGD---EVLLPGL-PPLDPQDTPSFINDSASYPAFFDMIVTRQVSNIDKADWILCNTFYELEKEVI 223 (224)
Q Consensus 161 ~~~~---~~~~Pgl-p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ilvNTf~eLE~~~l 223 (224)
+.+. ...+||+ ++++.+|+|..+.+. .. .++.+. +..+..++++|+++|||+|||+.++
T Consensus 166 ~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~--~~-~~~~~~-~~~~~~~~~~~~l~nt~~ele~~~~ 228 (463)
T 2acv_A 166 DSDRDHQLLNIPGISNQVPSNVLPDACFNK--DG-GYIAYY-KLAERFRDTKGIIVNTFSDLEQSSI 228 (463)
T ss_dssp CSSGGGCEECCTTCSSCEEGGGSCHHHHCT--TT-HHHHHH-HHHHHHTTSSEEEESCCHHHHHHHH
T ss_pred CccccCceeECCCCCCCCChHHCchhhcCC--ch-HHHHHH-HHHHhcccCCEEEECCHHHHhHHHH
Confidence 1122 4568999 889989998655433 12 445555 6667788999999999999998764
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.97 E-value=1.1e-29 Score=225.24 Aligned_cols=209 Identities=23% Similarity=0.285 Sum_probs=140.7
Q ss_pred CCceEEEEeCCCccchHHHHHHHHHHHhCC--CEEEEEecccccccccc-CCCC-CCCeEEEEecCCCCCCCCCCcCCHH
Q 043256 13 KLANCLVLSYPAQGHINPLLLFSKRLERKG--IKVTIVTTYFISKSLHR-DPSS-SISIALETISDGYDKGGSAQAESDQ 88 (224)
Q Consensus 13 ~~~hvl~~p~p~~GH~~P~l~La~~La~~G--~~VT~~~t~~~~~~~~~-~~~~-~~~i~~~~l~~~~~~~~~~~~~~~~ 88 (224)
++.||+++|+|++||++||++|||+|++|| +.|||++++.+..++.+ .... ..+|+|+.+++++ +++.+...+..
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~gl-p~~~~~~~~~~ 84 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGV-PEGYVFAGRPQ 84 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCC-CTTCCCCCCTT
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCC-CCcccccCChH
Confidence 457999999999999999999999999985 66788998765544432 1000 1149999999887 44332111211
Q ss_pred HHHHHHHHH----hHHHHHHHHHhc-CCCcEEEeCCCcccHHHHHHHcCCceEEechhhHHHHHHHHHhh----h-CCCC
Q 043256 89 AYVDRFWQI----GLQTLTELVERM-NDVDCIVFDSFLPWALDVAKKFGLTGAAFLTQSCAVAAIYHHVN----K-GLIK 158 (224)
Q Consensus 89 ~~~~~~~~~----~~~~l~~ll~~~-~~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t~~a~~~~~~~~~~----~-~~~~ 158 (224)
..+..+... +++.+++++++. .++||||+|.++.|+.++|+++|||++.||+++++.++.+++.. . +...
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (456)
T 2c1x_A 85 EDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSG 164 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCcc
Confidence 222222222 233344444332 28999999999999999999999999999999998887776542 1 3211
Q ss_pred C-CCCCCce-eCCCCCCCCCCCCCCCcCCCCCchHHHHHHHHHHhhcccCCCEEEEcChhhhhHhhh
Q 043256 159 L-PLIGDEV-LLPGLPPLDPQDTPSFINDSASYPAFFDMIVTRQVSNIDKADWILCNTFYELEKEVI 223 (224)
Q Consensus 159 ~-~~~~~~~-~~Pglp~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ilvNTf~eLE~~~l 223 (224)
. ...+..+ .+||+++++.+|+|..+........+.+.+. +..+..++++++|+|||+|||+.++
T Consensus 165 ~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vl~ns~~~le~~~~ 230 (456)
T 2c1x_A 165 IQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLH-RMGQVLPKATAVFINSFEELDDSLT 230 (456)
T ss_dssp CTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHH-HHHHHGGGSSCEEESSCGGGCHHHH
T ss_pred cccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHH-HHHHhhhhCCEEEECChHHHhHHHH
Confidence 1 1112223 4899999999999976543222233444554 5556678899999999999999753
No 5
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.97 E-value=3.5e-29 Score=223.28 Aligned_cols=206 Identities=24% Similarity=0.309 Sum_probs=145.7
Q ss_pred CCceEEEEeCCCccchHHHHHHHHHHHhC-CCEEEEEecccc--cccccc-CCC-CCCCeEEEEecCCCCCCCCCCcCCH
Q 043256 13 KLANCLVLSYPAQGHINPLLLFSKRLERK-GIKVTIVTTYFI--SKSLHR-DPS-SSISIALETISDGYDKGGSAQAESD 87 (224)
Q Consensus 13 ~~~hvl~~p~p~~GH~~P~l~La~~La~~-G~~VT~~~t~~~--~~~~~~-~~~-~~~~i~~~~l~~~~~~~~~~~~~~~ 87 (224)
++.||+++|+|++||++||++||++|++| ||+|||+++..+ .+.+.+ ... .. +++|+.+|++..++ .....+.
T Consensus 5 ~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~-~i~~~~l~~~~~~~-~~~~~~~ 82 (480)
T 2vch_A 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPS-SISSVFLPPVDLTD-LSSSTRI 82 (480)
T ss_dssp -CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCT-TEEEEECCCCCCTT-SCTTCCH
T ss_pred CCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCC-CceEEEcCCCCCCC-CCCchhH
Confidence 34699999999999999999999999998 999999999874 232221 011 11 49999998642122 1111223
Q ss_pred HHHHHHHHHHhHHHHHHHHHhc---CCC-cEEEeCCCcccHHHHHHHcCCceEEechhhHHHHHHHHHhhh----CCCCC
Q 043256 88 QAYVDRFWQIGLQTLTELVERM---NDV-DCIVFDSFLPWALDVAKKFGLTGAAFLTQSCAVAAIYHHVNK----GLIKL 159 (224)
Q Consensus 88 ~~~~~~~~~~~~~~l~~ll~~~---~~~-~~iI~D~~~~~~~~vA~~lgiP~v~f~t~~a~~~~~~~~~~~----~~~~~ 159 (224)
...+......+.+.++++++++ .++ ||||+|.++.|+..+|+++|||++.||+++++.++++++++. +..+.
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEF 162 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSCG
T ss_pred HHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCcc
Confidence 2222222233557788888774 267 999999999999999999999999999999998888887642 21111
Q ss_pred CCCCCceeCCCCCCCCCCCCCCCcCCCCCchHHHHHHHHHHhhcccCCCEEEEcChhhhhHhhh
Q 043256 160 PLIGDEVLLPGLPPLDPQDTPSFINDSASYPAFFDMIVTRQVSNIDKADWILCNTFYELEKEVI 223 (224)
Q Consensus 160 ~~~~~~~~~Pglp~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ilvNTf~eLE~~~l 223 (224)
.+.+..+.+||+++++..++|..+.+.. ...++.+. +..+..++++|+++|||+|||+.++
T Consensus 163 ~~~~~~~~~Pg~~p~~~~~l~~~~~~~~--~~~~~~~~-~~~~~~~~~~g~~~nt~~ele~~~~ 223 (480)
T 2vch_A 163 RELTEPLMLPGCVPVAGKDFLDPAQDRK--DDAYKWLL-HNTKRYKEAEGILVNTFFELEPNAI 223 (480)
T ss_dssp GGCSSCBCCTTCCCBCGGGSCGGGSCTT--SHHHHHHH-HHHHHGGGCSEEEESCCTTTSHHHH
T ss_pred cccCCcccCCCCCCCChHHCchhhhcCC--chHHHHHH-HHHHhcccCCEEEEcCHHHHhHHHH
Confidence 1112235689999999999998764432 12445555 6667788899999999999998754
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.75 E-value=6.5e-18 Score=147.39 Aligned_cols=123 Identities=17% Similarity=0.157 Sum_probs=90.5
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCCCCCCCC----cCCHHH
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYDKGGSAQ----AESDQA 89 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~----~~~~~~ 89 (224)
..||+++|+|++||++|++.||++|++|||+|||++++...+.+.+ . +++|+.+++++ +.+... ..+...
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~---~--g~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA---A--GATPVVYDSIL-PKESNPEESWPEDQES 85 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---H--TCEEEECCCCS-CCTTCTTCCCCSSHHH
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh---C--CCEEEecCccc-cccccchhhcchhHHH
Confidence 4699999999999999999999999999999999999877655543 1 37888887654 222111 123332
Q ss_pred HHHHHHHH---hHHHHHHHHHhcCCCcEEEeCCCcccHHHHHHHcCCceEEechhhH
Q 043256 90 YVDRFWQI---GLQTLTELVERMNDVDCIVFDSFLPWALDVAKKFGLTGAAFLTQSC 143 (224)
Q Consensus 90 ~~~~~~~~---~~~~l~~ll~~~~~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t~~a 143 (224)
.+..+... +.+.+.+++++. ++||||+|.++.|+..+|+++|||++.+++.++
T Consensus 86 ~~~~~~~~~~~~~~~l~~~l~~~-~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~ 141 (424)
T 2iya_A 86 AMGLFLDEAVRVLPQLEDAYADD-RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFV 141 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTS-CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-CCCEEEEcCcccHHHHHHHhcCCCEEEEecccc
Confidence 33222222 223444555544 899999999999999999999999999998764
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.65 E-value=1.1e-15 Score=131.72 Aligned_cols=123 Identities=14% Similarity=0.149 Sum_probs=82.9
Q ss_pred CCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCC------CCCCCCc--
Q 043256 13 KLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYD------KGGSAQA-- 84 (224)
Q Consensus 13 ~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~------~~~~~~~-- 84 (224)
+.+|||++|+|++||++|++.||++|++|||+|||++++.......+ ++.++.+..+.. +......
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAEA------GLCAVDVSPGVNYAKLFVPDDTDVTDP 94 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHTT------TCEEEESSTTCCSHHHHSCCC------
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHhc------CCeeEecCCchhHhhhccccccccccc
Confidence 46899999999999999999999999999999999998866543322 256666532210 1110000
Q ss_pred -C----CHHHHHHHHHH---HhHHHHHHHHHhcCCCcEEEeCCCcccHHHHHHHcCCceEEechhh
Q 043256 85 -E----SDQAYVDRFWQ---IGLQTLTELVERMNDVDCIVFDSFLPWALDVAKKFGLTGAAFLTQS 142 (224)
Q Consensus 85 -~----~~~~~~~~~~~---~~~~~l~~ll~~~~~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t~~ 142 (224)
. ........+.. .....+.+++++. +||+||+|.+..|+..+|+++|||++.++...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~ 159 (400)
T 4amg_A 95 MHSEGLGEGFFAEMFARVSAVAVDGALRTARSW-RPDLVVHTPTQGAGPLTAAALQLPCVELPLGP 159 (400)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHH-CCSEEEECTTCTHHHHHHHHTTCCEEECCSST
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEECcchHHHHHHHHHcCCCceeecccc
Confidence 0 01111111211 1223444555555 79999999999999999999999999987654
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.56 E-value=1.1e-14 Score=126.87 Aligned_cols=122 Identities=11% Similarity=0.110 Sum_probs=83.4
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCCCCCCCC-cCCHH-HHHH
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYDKGGSAQ-AESDQ-AYVD 92 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~-~~~~~-~~~~ 92 (224)
+||+++|++++||++|++.||++|++|||+|||+++....+.+.. . +++++.++... .+.... ..... .+..
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~---~--g~~~~~i~~~~-~~~~~~~~~~~~~~~~~ 74 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE---V--GVPHVPVGPSA-RAPIQRAKPLTAEDVRR 74 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---T--TCCEEECCC--------CCSCCCHHHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH---c--CCeeeeCCCCH-HHHhhcccccchHHHHH
Confidence 489999999999999999999999999999999999876544442 2 38888887432 111111 01111 1111
Q ss_pred HHHHHhHHHHHHHHHhcCCCcEEEeCC-Cccc--HHHHHHHcCCceEEechhh
Q 043256 93 RFWQIGLQTLTELVERMNDVDCIVFDS-FLPW--ALDVAKKFGLTGAAFLTQS 142 (224)
Q Consensus 93 ~~~~~~~~~l~~ll~~~~~~~~iI~D~-~~~~--~~~vA~~lgiP~v~f~t~~ 142 (224)
.+.......++++++...++||||+|. +..| +..+|+++|||++.+++.+
T Consensus 75 ~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~ 127 (415)
T 1iir_A 75 FTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCP 127 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCC
Confidence 222222334455554222899999998 6778 8899999999999998866
No 9
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.50 E-value=1.9e-13 Score=119.00 Aligned_cols=121 Identities=19% Similarity=0.215 Sum_probs=86.7
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCCCCCCCC----cCCHHHH
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYDKGGSAQ----AESDQAY 90 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~----~~~~~~~ 90 (224)
.||+++++++.||++|++.|++.|+++||+||++++....+.+.. . +++++.++... +.+... ..+....
T Consensus 8 ~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~---~--g~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 81 (430)
T 2iyf_A 8 AHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA---T--GPRPVLYHSTL-PGPDADPEAWGSTLLDN 81 (430)
T ss_dssp CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT---T--SCEEEECCCCS-CCTTSCGGGGCSSHHHH
T ss_pred ceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh---C--CCEEEEcCCcC-ccccccccccchhhHHH
Confidence 599999999999999999999999999999999999876544432 2 38888887543 212111 1232222
Q ss_pred HHHHHH---HhHHHHHHHHHhcCCCcEEEeCCCcccHHHHHHHcCCceEEechhh
Q 043256 91 VDRFWQ---IGLQTLTELVERMNDVDCIVFDSFLPWALDVAKKFGLTGAAFLTQS 142 (224)
Q Consensus 91 ~~~~~~---~~~~~l~~ll~~~~~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t~~ 142 (224)
+..+.. .....+.+++++. ++||||+|.+..|+..+|+++|||++.+++..
T Consensus 82 ~~~~~~~~~~~~~~l~~~l~~~-~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~ 135 (430)
T 2iyf_A 82 VEPFLNDAIQALPQLADAYADD-IPDLVLHDITSYPARVLARRWGVPAVSLSPNL 135 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS-CCSEEEEETTCHHHHHHHHHHTCCEEEEESSC
T ss_pred HHHHHHHHHHHHHHHHHHhhcc-CCCEEEECCccHHHHHHHHHcCCCEEEEeccc
Confidence 222211 1234455566655 89999999987889999999999999998654
No 10
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.47 E-value=2.9e-13 Score=116.37 Aligned_cols=120 Identities=17% Similarity=0.225 Sum_probs=84.0
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCCC-CCCC--CcCCHHHHH
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYDK-GGSA--QAESDQAYV 91 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~~~~--~~~~~~~~~ 91 (224)
.||+++++++.||++|++.||+.|+++||+|+|+++....+.+.. . +++++.++..++. .+.. ...+....+
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~---~--G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA---A--GAEVVLYKSEFDTFHVPEVVKQEDAETQL 79 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH---T--TCEEEECCCGGGTSSSSSSSCCTTHHHHH
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH---c--CCEEEecccccccccccccccccchHHHH
Confidence 499999999999999999999999999999999998876665543 1 3788888642211 0100 111222222
Q ss_pred HH-HHHH---hHHHHHHHHHhcCCCcEEEeC-CCcccHHHHHHHcCCceEEech
Q 043256 92 DR-FWQI---GLQTLTELVERMNDVDCIVFD-SFLPWALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 92 ~~-~~~~---~~~~l~~ll~~~~~~~~iI~D-~~~~~~~~vA~~lgiP~v~f~t 140 (224)
.. +... ....+.+++++. +||+||+| .+..|+..+|+++|||++.+.+
T Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~-~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~ 132 (402)
T 3ia7_A 80 HLVYVRENVAILRAAEEALGDN-PPDLVVYDVFPFIAGRLLAARWDRPAVRLTG 132 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC-CCSEEEEESTTHHHHHHHHHHHTCCEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCCEEEECchHHHHHHHHHHhhCCCEEEEec
Confidence 22 2221 223445555555 89999999 7888899999999999998863
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.45 E-value=2.4e-13 Score=117.75 Aligned_cols=121 Identities=15% Similarity=0.169 Sum_probs=84.1
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCCCCCCC---CcCCHHHH
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYDKGGSA---QAESDQAY 90 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~---~~~~~~~~ 90 (224)
..||+++++++.||++|++.||+.|+++||+|+|+++....+.+.. . +++++.++..++..... ...+....
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~---~--G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA---A--GATVVPYQSEIIDADAAEVFGSDDLGVR 94 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---T--TCEEEECCCSTTTCCHHHHHHSSSSCHH
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh---c--CCEEEeccccccccccchhhccccHHHH
Confidence 4699999999999999999999999999999999998877666543 2 38888887433111100 00010011
Q ss_pred HHH-HHHH---hHHHHHHHHHhcCCCcEEEeC-CCcccHHHHHHHcCCceEEech
Q 043256 91 VDR-FWQI---GLQTLTELVERMNDVDCIVFD-SFLPWALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 91 ~~~-~~~~---~~~~l~~ll~~~~~~~~iI~D-~~~~~~~~vA~~lgiP~v~f~t 140 (224)
+.. +... ....+.+++++. +||+||+| .+..|+..+|+++|||++.+.+
T Consensus 95 ~~~~~~~~~~~~~~~l~~~l~~~-~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~ 148 (415)
T 3rsc_A 95 PHLMYLRENVSVLRATAEALDGD-VPDLVLYDDFPFIAGQLLAARWRRPAVRLSA 148 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSS-CCSEEEEESTTHHHHHHHHHHTTCCEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-CCCEEEECchhhhHHHHHHHHhCCCEEEEEe
Confidence 111 1111 223445555555 89999999 7788888999999999999873
No 12
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.45 E-value=2.2e-13 Score=118.44 Aligned_cols=122 Identities=10% Similarity=0.000 Sum_probs=81.1
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCCCCCCC--CcCCHH-HHH
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYDKGGSA--QAESDQ-AYV 91 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~--~~~~~~-~~~ 91 (224)
+||+++++++.||++|++.||++|+++||+|||++++...+.+.. . +++++.++... .+... ...... ...
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~---~--g~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 74 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE---V--GVPHVPVGLPQ-HMMLQEGMPPPPPEEEQ 74 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---H--TCCEEECSCCG-GGCCCTTSCCCCHHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH---c--CCeeeecCCCH-HHHHhhccccchhHHHH
Confidence 389999999999999999999999999999999999875544442 1 37888886432 11000 001111 111
Q ss_pred HHHHHHhHHHHHHHHHhcCCCcEEEeCCC-ccc--HHHHHHHcCCceEEechhh
Q 043256 92 DRFWQIGLQTLTELVERMNDVDCIVFDSF-LPW--ALDVAKKFGLTGAAFLTQS 142 (224)
Q Consensus 92 ~~~~~~~~~~l~~ll~~~~~~~~iI~D~~-~~~--~~~vA~~lgiP~v~f~t~~ 142 (224)
..+.......++.+.+...++||||+|.+ ..| +..+|+++|||++.+++.+
T Consensus 75 ~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~ 128 (416)
T 1rrv_A 75 RLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSP 128 (416)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 12222222333443322127999999974 456 7889999999999987765
No 13
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.31 E-value=8.3e-12 Score=107.05 Aligned_cols=121 Identities=14% Similarity=0.093 Sum_probs=80.6
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCC-----------CCCCCCC
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGY-----------DKGGSAQ 83 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~-----------~~~~~~~ 83 (224)
+||++++.++.||++|++.|++.|+++||+||++++....+.+.. . +++++.++... .++....
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~---~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG---V--GLPAVATTDLPIRHFITTDREGRPEAIPS 75 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---T--TCCEEESCSSCHHHHHHBCTTSCBCCCCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh---C--CCEEEEeCCcchHHHHhhhcccCccccCc
Confidence 379999999999999999999999999999999998765444432 1 36777775321 0000000
Q ss_pred cCCHHHHH-HH-HHHH---hHHHHHHHHHhcCCCcEEEeCCCcccHHHHHHHcCCceEEechh
Q 043256 84 AESDQAYV-DR-FWQI---GLQTLTELVERMNDVDCIVFDSFLPWALDVAKKFGLTGAAFLTQ 141 (224)
Q Consensus 84 ~~~~~~~~-~~-~~~~---~~~~l~~ll~~~~~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t~ 141 (224)
.......+ .. +... ....+.+++++. +||+||+|.+..|+..+|+.+|||++.++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~ 137 (384)
T 2p6p_A 76 DPVAQARFTGRWFARMAASSLPRMLDFSRAW-RPDLIVGGTMSYVAPLLALHLGVPHARQTWD 137 (384)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCSEEEEETTCTHHHHHHHHHTCCEEEECCS
T ss_pred chHHHHHHHHHHHHhhHHHHHHHHHHHHhcc-CCcEEEECcchhhHHHHHHhcCCCEEEeccC
Confidence 00111111 11 1111 123344455555 7999999998888889999999999988754
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.26 E-value=1.6e-11 Score=107.54 Aligned_cols=123 Identities=11% Similarity=0.094 Sum_probs=82.4
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCCCCCC------------
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYDKGGS------------ 81 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~------------ 81 (224)
..||++++.++.||++|++.||+.|.++||+|+|++++...+.+.. . +++++.++...+..+.
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~---~--G~~~~~i~~~~~~~~~~~~~~~~~~~~~ 94 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA---A--GLTAVPVGTDVDLVDFMTHAGHDIIDYV 94 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT---T--TCCEEECSCCCCHHHHHHHTTHHHHHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh---C--CCceeecCCccchHHHhhhhhccccccc
Confidence 3689999999999999999999999999999999999876544442 2 3888888643200000
Q ss_pred ---C-----Cc-CCHH---HHHHHHHHHhH-----H-HHHHH---HHhcCCCcEEEeCCCcccHHHHHHHcCCceEEech
Q 043256 82 ---A-----QA-ESDQ---AYVDRFWQIGL-----Q-TLTEL---VERMNDVDCIVFDSFLPWALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 82 ---~-----~~-~~~~---~~~~~~~~~~~-----~-~l~~l---l~~~~~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t 140 (224)
. .. .... .....+...+. . .++++ +++. +||+||+|.+..|+..+|+++|||++.+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~pDlVv~d~~~~~~~~aA~~lgiP~v~~~~ 173 (441)
T 2yjn_A 95 RSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW-RPDLVIWEPLTFAAPIAAAVTGTPHARLLW 173 (441)
T ss_dssp TTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH-CCSEEEECTTCTHHHHHHHHHTCCEEEECS
T ss_pred ccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc-CCCEEEecCcchhHHHHHHHcCCCEEEEec
Confidence 0 00 0111 11111211100 1 33433 4444 899999999888889999999999999865
Q ss_pred hh
Q 043256 141 QS 142 (224)
Q Consensus 141 ~~ 142 (224)
..
T Consensus 174 ~~ 175 (441)
T 2yjn_A 174 GP 175 (441)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 15
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.25 E-value=4.2e-11 Score=103.28 Aligned_cols=121 Identities=16% Similarity=0.181 Sum_probs=83.8
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCCC---------------
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYDK--------------- 78 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~--------------- 78 (224)
.+||+++..++.||++|++.|++.|.++||+|+++++ ...+.+.. . +++++.++...+.
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~---~--G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA---A--GLEVVDVAPDYSAVKVFEQVAKDNPRFA 93 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT---T--TCEEEESSTTCCHHHHHHHHHHHCHHHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh---C--CCeeEecCCccCHHHHhhhcccCCcccc
Confidence 4699999999999999999999999999999999998 54444432 2 3888887632100
Q ss_pred -----CCCCCcCCHHHHHHHHHHHhHHHHHHHHHhcCCCcEEEeCCCcccHHHHHHHcCCceEEechh
Q 043256 79 -----GGSAQAESDQAYVDRFWQIGLQTLTELVERMNDVDCIVFDSFLPWALDVAKKFGLTGAAFLTQ 141 (224)
Q Consensus 79 -----~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t~ 141 (224)
............+......+...+.+++++. +||+||+|....++..+|+.+|||++.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~ 160 (398)
T 3oti_A 94 ETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY-RPDLVVYEQGATVGLLAADRAGVPAVQRNQS 160 (398)
T ss_dssp HTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH-CCSEEEEETTCHHHHHHHHHHTCCEEEECCT
T ss_pred ccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEECchhhHHHHHHHHcCCCEEEEecc
Confidence 0000111111222222222335566677776 7999999987777889999999999987654
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.20 E-value=3.7e-11 Score=103.54 Aligned_cols=123 Identities=15% Similarity=0.176 Sum_probs=81.8
Q ss_pred CCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCC--------CCCCC--
Q 043256 13 KLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYD--------KGGSA-- 82 (224)
Q Consensus 13 ~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~--------~~~~~-- 82 (224)
..+||+++..++.||++|++.|++.|.++||+|++++++...+.+.. . +++++.++.... ..+..
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~---~--G~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG---A--GLPFAPTCPSLDMPEVLSWDREGNRTT 88 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH---T--TCCEEEEESSCCHHHHHSBCTTSCBCC
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh---C--CCeeEecCCccchHhhhhhhccCcccc
Confidence 35799999999999999999999999999999999998765554443 1 366766652100 00000
Q ss_pred CcCCHH----HHHHHHH---HHhHHHHHHHHHhcCCCcEEEeCCCcccHHHHHHHcCCceEEechh
Q 043256 83 QAESDQ----AYVDRFW---QIGLQTLTELVERMNDVDCIVFDSFLPWALDVAKKFGLTGAAFLTQ 141 (224)
Q Consensus 83 ~~~~~~----~~~~~~~---~~~~~~l~~ll~~~~~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t~ 141 (224)
...... .....+. ..+...+.+++++. +||+||+|....++..+|+.+|||++.+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~ 153 (398)
T 4fzr_A 89 MPREEKPLLEHIGRGYGRLVLRMRDEALALAERW-KPDLVLTETYSLTGPLVAATLGIPWIEQSIR 153 (398)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCSEEEEETTCTHHHHHHHHHTCCEEEECCS
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECccccHHHHHHHhhCCCEEEeccC
Confidence 000111 1111111 11223455566666 8999999987778888999999999987654
No 17
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.18 E-value=2.3e-11 Score=105.60 Aligned_cols=121 Identities=12% Similarity=0.182 Sum_probs=78.2
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCCC-CCC--CCcCCHHHHH
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYDK-GGS--AQAESDQAYV 91 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~~~--~~~~~~~~~~ 91 (224)
+||+++..+..||++|++.||+.|.++||+|+|+++....+.+.. . +++++.++..... .+. ........
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~---~--g~~~~~l~~~~~~~~~~~~~~~~~~~~-- 73 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE---V--GVPMVPVGRAVRAGAREPGELPPGAAE-- 73 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH---T--TCCEEECSSCSSGGGSCTTCCCTTCGG--
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH---c--CCceeecCCCHHHHhccccCCHHHHHH--
Confidence 379999999999999999999999999999999998876555543 1 3778887632110 000 00111111
Q ss_pred HHHHHHhHHHHHHHHHhcCCCcEEEeCCCcccH---HHHHHHcCCceEEechhhH
Q 043256 92 DRFWQIGLQTLTELVERMNDVDCIVFDSFLPWA---LDVAKKFGLTGAAFLTQSC 143 (224)
Q Consensus 92 ~~~~~~~~~~l~~ll~~~~~~~~iI~D~~~~~~---~~vA~~lgiP~v~f~t~~a 143 (224)
.+.......++++.+...++|+||+|....++ ..+|+++|||++..+.+..
T Consensus 74 -~~~~~~~~~~~~l~~~~~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~ 127 (404)
T 3h4t_A 74 -VVTEVVAEWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPD 127 (404)
T ss_dssp -GHHHHHHHHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGG
T ss_pred -HHHHHHHHHHHHHHHHhcCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCc
Confidence 11111222233333322368999999766554 6899999999997766543
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.17 E-value=1e-10 Score=100.43 Aligned_cols=121 Identities=14% Similarity=0.124 Sum_probs=78.8
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEe-cCCCC---------C-CCCC-
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETI-SDGYD---------K-GGSA- 82 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l-~~~~~---------~-~~~~- 82 (224)
+||+++..++.||++|++.|++.|.++||+|+++++....+.+.. . +++++.+ ..... + .+..
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~---~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG---A--GLTTAGIRGNDRTGDTGGTTQLRFPNPAF 76 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH---B--TCEEEEC--------------CCSCCGGG
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh---C--CCceeeecCCccchhhhhhhccccccccc
Confidence 589999999999999999999999999999999998765544432 1 2666666 21110 0 0000
Q ss_pred C-c--CCHHHHHHHHHHHh-------HHHHHHHHHhcCCCcEEEeCCCcccHHHHHHHcCCceEEechh
Q 043256 83 Q-A--ESDQAYVDRFWQIG-------LQTLTELVERMNDVDCIVFDSFLPWALDVAKKFGLTGAAFLTQ 141 (224)
Q Consensus 83 ~-~--~~~~~~~~~~~~~~-------~~~l~~ll~~~~~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t~ 141 (224)
. . ......+......+ ...+.+++++. +||+||+|.+..++..+|+.+|||++.+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~ 144 (391)
T 3tsa_A 77 GQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW-RPSVLLVDVCALIGRVLGGLLDLPVVLHRWG 144 (391)
T ss_dssp GCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCSEEEEETTCHHHHHHHHHTTCCEEEECCS
T ss_pred ccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc-CCCEEEeCcchhHHHHHHHHhCCCEEEEecC
Confidence 0 0 01111111111112 34455666666 8999999987667778999999999988543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.02 E-value=1.3e-09 Score=93.92 Aligned_cols=123 Identities=21% Similarity=0.163 Sum_probs=82.0
Q ss_pred CCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCC------------CCCCC
Q 043256 13 KLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDG------------YDKGG 80 (224)
Q Consensus 13 ~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~------------~~~~~ 80 (224)
.++||+++..++.||++|++.|++.|.++||+|+++++....+.+.. . +++++.++.. ....+
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~---~--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK---L--GFEPVATGMPVFDGFLAALRIRFDTDS 93 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---T--TCEEEECCCCHHHHHHHHHHHHHSCSC
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh---c--CCceeecCcccccchhhhhhhhhcccC
Confidence 46799999999999999999999999999999999998755433332 1 3778777631 00000
Q ss_pred CC------CcCCHHHHHHHH-HHHhHHHHHHHHHhcCCCcEEEeCCCcccHHHHHHHcCCceEEechh
Q 043256 81 SA------QAESDQAYVDRF-WQIGLQTLTELVERMNDVDCIVFDSFLPWALDVAKKFGLTGAAFLTQ 141 (224)
Q Consensus 81 ~~------~~~~~~~~~~~~-~~~~~~~l~~ll~~~~~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t~ 141 (224)
.. ........+... ...+...+.+++++. +||+||+|....++..+|+.+|||++.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~ 160 (412)
T 3otg_A 94 PEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL-RPDLVVQEISNYGAGLAALKAGIPTICHGVG 160 (412)
T ss_dssp CTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH-CCSEEEEETTCHHHHHHHHHHTCCEEEECCS
T ss_pred CccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc-CCCEEEECchhhHHHHHHHHcCCCEEEeccc
Confidence 00 011111111111 111224556666666 8999999977667778999999999886544
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.53 E-value=3.7e-07 Score=78.11 Aligned_cols=114 Identities=15% Similarity=0.134 Sum_probs=67.6
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecccccc-c-cccCCCCCCCeEEEEecC-CCCCCCCCCcCCHHHHH
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISK-S-LHRDPSSSISIALETISD-GYDKGGSAQAESDQAYV 91 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~-~-~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~~ 91 (224)
.+|++..-..-||++|.+.||+.|.++||+|+|+++....+ + +.. . ++.++.++. ++...+. .+.+...+
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~---~--g~~~~~i~~~~~~~~~~--~~~~~~~~ 75 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK---A--GLPLHLIQVSGLRGKGL--KSLVKAPL 75 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG---G--TCCEEECC----------------CHH
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh---c--CCcEEEEECCCcCCCCH--HHHHHHHH
Confidence 36776654334999999999999999999999998764322 1 221 1 367777762 3311110 11111112
Q ss_pred HHHHHHhHHHHHHHHHhcCCCcEEEeCCCccc--HHHHHHHcCCceEEe
Q 043256 92 DRFWQIGLQTLTELVERMNDVDCIVFDSFLPW--ALDVAKKFGLTGAAF 138 (224)
Q Consensus 92 ~~~~~~~~~~l~~ll~~~~~~~~iI~D~~~~~--~~~vA~~lgiP~v~f 138 (224)
..+.. . .....++++. +||+||++..... +...|+.+|||.++.
T Consensus 76 ~~~~~-~-~~~~~~l~~~-~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 76 ELLKS-L-FQALRVIRQL-RPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHH-H-HHHHHHHHHH-CCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHH-H-HHHHHHHHhc-CCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 22211 1 1234567777 8999999975543 345678899999975
No 21
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=97.69 E-value=0.00024 Score=59.57 Aligned_cols=116 Identities=16% Similarity=0.119 Sum_probs=71.0
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecccccc--ccccCCCCCCCeEEEEecC-CCCCCCCCCcCCHHHHH
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISK--SLHRDPSSSISIALETISD-GYDKGGSAQAESDQAYV 91 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~--~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~~ 91 (224)
.+|+++....-||..+++.|++.|+++||+|++++...... .+.. . ++++..++. ++ +... ....+....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~---~--g~~~~~~~~~~~-~~~~-~~~~~~~~~ 79 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK---H--GIEIDFIRISGL-RGKG-IKALIAAPL 79 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG---G--TCEEEECCCCCC-TTCC-HHHHHTCHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc---c--CCceEEecCCcc-CcCc-cHHHHHHHH
Confidence 68998886666999999999999999999999998764321 1221 1 377776652 22 1110 000000011
Q ss_pred HHHHHHhHHHHHHHHHhcCCCcEEEeCCCc-c-cHHHHHHHcCCceEEech
Q 043256 92 DRFWQIGLQTLTELVERMNDVDCIVFDSFL-P-WALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 92 ~~~~~~~~~~l~~ll~~~~~~~~iI~D~~~-~-~~~~vA~~lgiP~v~f~t 140 (224)
... . ....+..++++. ++|+|+++... . ++..+|+.+|+|+++...
T Consensus 80 ~~~-~-~~~~l~~~l~~~-~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 127 (364)
T 1f0k_A 80 RIF-N-AWRQARAIMKAY-KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ 127 (364)
T ss_dssp HHH-H-HHHHHHHHHHHH-CCSEEEECSSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred HHH-H-HHHHHHHHHHhc-CCCEEEEeCCcCchHHHHHHHHcCCCEEEEec
Confidence 111 1 122345566666 79999998643 2 345678889999986543
No 22
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=96.15 E-value=0.13 Score=43.42 Aligned_cols=39 Identities=26% Similarity=0.367 Sum_probs=29.7
Q ss_pred CceEEEEeC---C-Cc-cchHHHHHHHHHHHhCCCEEEEEeccc
Q 043256 14 LANCLVLSY---P-AQ-GHINPLLLFSKRLERKGIKVTIVTTYF 52 (224)
Q Consensus 14 ~~hvl~~p~---p-~~-GH~~P~l~La~~La~~G~~VT~~~t~~ 52 (224)
+++|+++.. | .. |--.-+.+|++.|+++||+|+++++..
T Consensus 2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~ 45 (439)
T 3fro_A 2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSH 45 (439)
T ss_dssp CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECT
T ss_pred ceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 468887762 1 33 555568999999999999999999653
No 23
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=95.35 E-value=0.075 Score=45.24 Aligned_cols=122 Identities=16% Similarity=0.084 Sum_probs=65.4
Q ss_pred CCceEEEEeC---C--------CccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCCCCCC
Q 043256 13 KLANCLVLSY---P--------AQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYDKGGS 81 (224)
Q Consensus 13 ~~~hvl~~p~---p--------~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~ 81 (224)
+..+|+++.. | .-|+-..+..|++.|+++||+|++++.......-....... +++++.++..- ....
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~-~v~v~~~~~~~-~~~~ 96 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAE-NLRVINIAAGP-YEGL 96 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEET-TEEEEEECCSC-SSSC
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccC-CeEEEEecCCC-cccc
Confidence 3568998874 3 24888999999999999999999998754321100000011 37777776321 1111
Q ss_pred CCcCCHHHHHHHHHHHhHHHHHHHHHhcCCCcEEEeCCCcc-c-HHHHHHHcCCceEEech
Q 043256 82 AQAESDQAYVDRFWQIGLQTLTELVERMNDVDCIVFDSFLP-W-ALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~iI~D~~~~-~-~~~vA~~lgiP~v~f~t 140 (224)
. ..+....+..+.. ..++..++...++|+|++..... + +..+++.+|+|.+...-
T Consensus 97 ~-~~~~~~~~~~~~~---~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h 153 (438)
T 3c48_A 97 S-KEELPTQLAAFTG---GMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAH 153 (438)
T ss_dssp C-GGGGGGGHHHHHH---HHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECS
T ss_pred c-hhHHHHHHHHHHH---HHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEec
Confidence 1 0111111111111 11222244332489998865322 2 23567788999886543
No 24
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=94.09 E-value=0.18 Score=41.97 Aligned_cols=105 Identities=13% Similarity=0.146 Sum_probs=64.7
Q ss_pred CceEEEEeC--C--CccchHHHHHHHHHHHhCCCEEEEEecccccccccc-CCCCCCCeEEEEecCCCCCCCCCCcCCHH
Q 043256 14 LANCLVLSY--P--AQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHR-DPSSSISIALETISDGYDKGGSAQAESDQ 88 (224)
Q Consensus 14 ~~hvl~~p~--p--~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~-~~~~~~~i~~~~l~~~~~~~~~~~~~~~~ 88 (224)
+++|+++.. + .-|+-.-+..|++.| +||+|++++.......... .... ++++..++... . . ...
T Consensus 4 ~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~--~---~~~- 72 (394)
T 3okp_A 4 SRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTL--DYEVIRWPRSV-M--L---PTP- 72 (394)
T ss_dssp CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTC--SSEEEEESSSS-C--C---SCH-
T ss_pred CceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhcccc--ceEEEEccccc-c--c---cch-
Confidence 457887753 3 348888999999999 7999999987654421111 0111 37777776321 0 0 011
Q ss_pred HHHHHHHHHhHHHHHHHHHhcCCCcEEEeCCCc--ccHHHHHHHcCCceEEe
Q 043256 89 AYVDRFWQIGLQTLTELVERMNDVDCIVFDSFL--PWALDVAKKFGLTGAAF 138 (224)
Q Consensus 89 ~~~~~~~~~~~~~l~~ll~~~~~~~~iI~D~~~--~~~~~vA~~lgiP~v~f 138 (224)
. ....+.+++++. ++|+|++.... .+....++++|+|.+++
T Consensus 73 ---~-----~~~~l~~~~~~~-~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 115 (394)
T 3okp_A 73 ---T-----TAHAMAEIIRER-EIDNVWFGAAAPLALMAGTAKQAGASKVIA 115 (394)
T ss_dssp ---H-----HHHHHHHHHHHT-TCSEEEESSCTTGGGGHHHHHHTTCSEEEE
T ss_pred ---h-----hHHHHHHHHHhc-CCCEEEECCcchHHHHHHHHHhcCCCcEEE
Confidence 0 112345666666 79999876543 34567789999995553
No 25
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=93.70 E-value=0.61 Score=40.49 Aligned_cols=120 Identities=12% Similarity=0.057 Sum_probs=66.0
Q ss_pred CceEEEEeC---C------------CccchHHHHHHHHHHHhCCCEEEEEeccccccc-------cccCCCCCCCeEEEE
Q 043256 14 LANCLVLSY---P------------AQGHINPLLLFSKRLERKGIKVTIVTTYFISKS-------LHRDPSSSISIALET 71 (224)
Q Consensus 14 ~~hvl~~p~---p------------~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~-------~~~~~~~~~~i~~~~ 71 (224)
+++|+++.. | .-|.-.-+..|++.|+++||+|++++....... +....... +++++.
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~-gv~v~~ 85 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETN-KVRIVR 85 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCS-SEEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCC-CeEEEE
Confidence 368998763 2 247778899999999999999999987533211 11100011 488887
Q ss_pred ecCCCCCCCCCCcCCHHHHHHHHHHHhHHHHHHHHHhcC-CCcEEEeCCCc-cc-HHHHHHHcCCceEEech
Q 043256 72 ISDGYDKGGSAQAESDQAYVDRFWQIGLQTLTELVERMN-DVDCIVFDSFL-PW-ALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 72 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~-~~~~iI~D~~~-~~-~~~vA~~lgiP~v~f~t 140 (224)
++..- ...... .........+ ...+..++++.. ++|+|.+-... .+ +..+++.+|+|.++..-
T Consensus 86 ~~~~~-~~~~~~-~~~~~~~~~~----~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H 151 (499)
T 2r60_A 86 IPFGG-DKFLPK-EELWPYLHEY----VNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGH 151 (499)
T ss_dssp ECCSC-SSCCCG-GGCGGGHHHH----HHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECS
T ss_pred ecCCC-cCCcCH-HHHHHHHHHH----HHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEcc
Confidence 76321 111000 0110011111 123445555532 78998875432 22 23567788999886433
No 26
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=93.53 E-value=0.96 Score=37.73 Aligned_cols=112 Identities=15% Similarity=0.175 Sum_probs=62.9
Q ss_pred CceEEEEeCCCc-cchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecC-CCCCCCCCCcCCHHHHH
Q 043256 14 LANCLVLSYPAQ-GHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISD-GYDKGGSAQAESDQAYV 91 (224)
Q Consensus 14 ~~hvl~~p~p~~-GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~~ 91 (224)
++.+....+|.. |.-.-+..|++.|+++||+|++++...... ... ... ++.+..++. .. +. ... ... ..
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~-~~~--~i~~~~~~~~~~-~~-~~~-~~~--~~ 85 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNK-VYP--NIYFHEVTVNQY-SV-FQY-PPY--DL 85 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C-CCT--TEEEECCCCC------CCS-CCH--HH
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-ccc-cCC--ceEEEecccccc-cc-ccc-ccc--cH
Confidence 567887777765 677888999999999999999998753321 111 112 377665542 11 10 000 001 11
Q ss_pred HHHHHHhHHHHHHHHHhcCCCcEEEeCCCcc--cHHHHHHHc---CCceEEech
Q 043256 92 DRFWQIGLQTLTELVERMNDVDCIVFDSFLP--WALDVAKKF---GLTGAAFLT 140 (224)
Q Consensus 92 ~~~~~~~~~~l~~ll~~~~~~~~iI~D~~~~--~~~~vA~~l---giP~v~f~t 140 (224)
. ....+.+++++. ++|+|++..... +...+++.+ ++|.+...-
T Consensus 86 ~-----~~~~l~~~l~~~-~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h 133 (394)
T 2jjm_A 86 A-----LASKMAEVAQRE-NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLH 133 (394)
T ss_dssp H-----HHHHHHHHHHHH-TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECC
T ss_pred H-----HHHHHHHHHHHc-CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEe
Confidence 1 112345566666 799999865433 234455554 599876543
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=89.31 E-value=2 Score=35.52 Aligned_cols=110 Identities=12% Similarity=0.051 Sum_probs=57.7
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhC-CCEEEEEecccccccccc--CCCCCCCeEE-EEecCCCCCCCCCCcCCHHHH
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERK-GIKVTIVTTYFISKSLHR--DPSSSISIAL-ETISDGYDKGGSAQAESDQAY 90 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~-G~~VT~~~t~~~~~~~~~--~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~~ 90 (224)
.+|+++.-- .+.......|++.|.++ ||+|.++++......... ... ++.+ ..++ +.... ......
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~----~~~~~~ 75 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSLF---GIQEDRNLD--VMQER----QALPDL 75 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHTT---TCCCSEECC--CCSSC----CCHHHH
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHHc---CCCcccccc--cCCCC----ccHHHH
Confidence 478877622 22334457789999988 799887766432211111 011 1322 2222 10111 112111
Q ss_pred HHHHHHHhHHHHHHHHHhcCCCcEEEe--CCCcccH-HHHHHHcCCceEEec
Q 043256 91 VDRFWQIGLQTLTELVERMNDVDCIVF--DSFLPWA-LDVAKKFGLTGAAFL 139 (224)
Q Consensus 91 ~~~~~~~~~~~l~~ll~~~~~~~~iI~--D~~~~~~-~~vA~~lgiP~v~f~ 139 (224)
. .. ....+..++++. +||+|++ +....|. ..+|+.+|||.+.+.
T Consensus 76 ~---~~-~~~~l~~~l~~~-~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~ 122 (376)
T 1v4v_A 76 A---AR-ILPQAARALKEM-GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVE 122 (376)
T ss_dssp H---HH-HHHHHHHHHHHT-TCSEEEEESSCHHHHHHHHHHHHTTCCEEEET
T ss_pred H---HH-HHHHHHHHHHHc-CCCEEEEeCChHHHHHHHHHHHHhCCCEEEEe
Confidence 1 11 113456677776 7999988 3344454 467888999987654
No 28
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=85.49 E-value=1 Score=42.37 Aligned_cols=119 Identities=19% Similarity=0.226 Sum_probs=61.8
Q ss_pred ceEEEEeCCCc-------------cchHHHH--------HHHHHHHhCCCEEE----EEecccccc-------ccccCCC
Q 043256 15 ANCLVLSYPAQ-------------GHINPLL--------LFSKRLERKGIKVT----IVTTYFISK-------SLHRDPS 62 (224)
Q Consensus 15 ~hvl~~p~p~~-------------GH~~P~l--------~La~~La~~G~~VT----~~~t~~~~~-------~~~~~~~ 62 (224)
.+|+++..-|. |...=.+ +||++|+++||+|| ++|-..... .... -.
T Consensus 279 ~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~-i~ 357 (816)
T 3s28_A 279 FNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLER-VY 357 (816)
T ss_dssp CEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEE-CT
T ss_pred eEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCccee-ec
Confidence 57887776553 4444444 58888888999987 776543221 1111 00
Q ss_pred CCCCeEEEEecCCCC----CCCCCCcCCHHHHHHHHHHHhHHHHHHHHHhcC-CCcEEEeCCC-ccc-HHHHHHHcCCce
Q 043256 63 SSISIALETISDGYD----KGGSAQAESDQAYVDRFWQIGLQTLTELVERMN-DVDCIVFDSF-LPW-ALDVAKKFGLTG 135 (224)
Q Consensus 63 ~~~~i~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~-~~~~iI~D~~-~~~-~~~vA~~lgiP~ 135 (224)
+..+++++.+|-+-. ...... ..+...+..+. ...+..+++... +||+|.+-.. .++ +..+|+.+|||.
T Consensus 358 ~~~gv~I~RvP~~~~~g~l~~~l~k-~~L~~~L~~F~---~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gvP~ 433 (816)
T 3s28_A 358 DSEYCDILRVPFRTEKGIVRKWISR-FEVWPYLETYT---EDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQ 433 (816)
T ss_dssp TCSSEEEEEECEEETTEEECSCCCT-TTCGGGHHHHH---HHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTCCE
T ss_pred CcCCeEEEEecCCCccccccccccH-HHHHHHHHHHH---HHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCCCE
Confidence 111478887763110 001111 11111222222 123444555543 7999987432 223 356888999998
Q ss_pred EEe
Q 043256 136 AAF 138 (224)
Q Consensus 136 v~f 138 (224)
+..
T Consensus 434 V~T 436 (816)
T 3s28_A 434 CTI 436 (816)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 29
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=84.26 E-value=3.5 Score=33.94 Aligned_cols=111 Identities=10% Similarity=0.003 Sum_probs=58.4
Q ss_pred eEEEEeCCCccchHHHHHHHHHHHhCCC-EEEEEecccccccccc-CCCCCCCeEE-EEecCCCCCCCCCCcCCHHHHHH
Q 043256 16 NCLVLSYPAQGHINPLLLFSKRLERKGI-KVTIVTTYFISKSLHR-DPSSSISIAL-ETISDGYDKGGSAQAESDQAYVD 92 (224)
Q Consensus 16 hvl~~p~p~~GH~~P~l~La~~La~~G~-~VT~~~t~~~~~~~~~-~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~~~~ 92 (224)
+|+++.. ..++...+..|++.|.++|+ ++.++.+......... .... ++.+ ..++ +... .......
T Consensus 2 kIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~----~~~~~~~-- 70 (384)
T 1vgv_A 2 KVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLF--SIVPDYDLN--IMQP----GQGLTEI-- 70 (384)
T ss_dssp EEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHH--TCCCSEECC--CCST----TSCHHHH--
T ss_pred eEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHc--CCCCCccee--cCCC----CccHHHH--
Confidence 5776642 34667788999999999994 8877655322111110 0000 1322 2222 1010 0122111
Q ss_pred HHHHHhHHHHHHHHHhcCCCcEEEeC--CCcccH-HHHHHHcCCceEEech
Q 043256 93 RFWQIGLQTLTELVERMNDVDCIVFD--SFLPWA-LDVAKKFGLTGAAFLT 140 (224)
Q Consensus 93 ~~~~~~~~~l~~ll~~~~~~~~iI~D--~~~~~~-~~vA~~lgiP~v~f~t 140 (224)
... ....+..++++. +||+|++- ....|. ..+|+..|+|.+....
T Consensus 71 -~~~-~~~~l~~~l~~~-~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~ 118 (384)
T 1vgv_A 71 -TCR-ILEGLKPILAEF-KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEA 118 (384)
T ss_dssp -HHH-HHHHHHHHHHHH-CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESC
T ss_pred -HHH-HHHHHHHHHHHh-CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEec
Confidence 111 123456677777 79999873 234454 4567788999887543
No 30
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=82.91 E-value=1.3 Score=36.43 Aligned_cols=83 Identities=10% Similarity=0.086 Sum_probs=49.1
Q ss_pred eEEEEe---CCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCCCCCCCCcCCHHHHHH
Q 043256 16 NCLVLS---YPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYDKGGSAQAESDQAYVD 92 (224)
Q Consensus 16 hvl~~p---~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~ 92 (224)
+|+++. .|.-|.-.-+..|++.|+++||+|++++...... .. . +++++.++.. .. ........
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~-~~----~--~~~v~~~~~~----~~---~~~~~~~~ 67 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGD-CP----K--AFELIQVPVK----SH---TNHGRNAE 67 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSC-CC----T--TCEEEECCCC----CS---SHHHHHHH
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCC-CC----C--CcEEEEEccC----cc---cchhhHHH
Confidence 466552 2445777889999999999999999998763221 11 1 3677666521 11 01111111
Q ss_pred HHHHHhHHHHHHHHHhcCCCcEEEeC
Q 043256 93 RFWQIGLQTLTELVERMNDVDCIVFD 118 (224)
Q Consensus 93 ~~~~~~~~~l~~ll~~~~~~~~iI~D 118 (224)
....+..++++. ++|+|++-
T Consensus 68 -----~~~~l~~~i~~~-~~Dvv~~~ 87 (374)
T 2iw1_A 68 -----YYAWVQNHLKEH-PADRVVGF 87 (374)
T ss_dssp -----HHHHHHHHHHHS-CCSEEEES
T ss_pred -----HHHHHHHHHhcc-CCCEEEEe
Confidence 112345566666 78988864
No 31
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=80.42 E-value=2.1 Score=34.81 Aligned_cols=79 Identities=13% Similarity=0.007 Sum_probs=49.3
Q ss_pred ccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCCCCCCCCcCCHHHHHHHHHHHhHHHHHH
Q 043256 25 QGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYDKGGSAQAESDQAYVDRFWQIGLQTLTE 104 (224)
Q Consensus 25 ~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 104 (224)
-|.-.-...|++.|+++||+|++++....... .. ++++... . .. . .+..
T Consensus 30 gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~-----~~--~~~~~~~-------~-----~~---~---------~l~~ 78 (342)
T 2iuy_A 30 GGIQWVVANLMDGLLELGHEVFLLGAPGSPAG-----RP--GLTVVPA-------G-----EP---E---------EIER 78 (342)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC-----ST--TEEECSC-------C-----SH---H---------HHHH
T ss_pred ChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC-----CC--cceeccC-------C-----cH---H---------HHHH
Confidence 47778899999999999999999987643211 11 2443210 0 01 0 3455
Q ss_pred HHHhcCCCcEEEeCCCcccHHHHHHHcCCceEE
Q 043256 105 LVERMNDVDCIVFDSFLPWALDVAKKFGLTGAA 137 (224)
Q Consensus 105 ll~~~~~~~~iI~D~~~~~~~~vA~~lgiP~v~ 137 (224)
++++. ++|+|++-...... ..++..|+| +.
T Consensus 79 ~l~~~-~~Dvi~~~~~~~~~-~~~~~~~~p-v~ 108 (342)
T 2iuy_A 79 WLRTA-DVDVVHDHSGGVIG-PAGLPPGTA-FI 108 (342)
T ss_dssp HHHHC-CCSEEEECSSSSSC-STTCCTTCE-EE
T ss_pred HHHhc-CCCEEEECCchhhH-HHHhhcCCC-EE
Confidence 66666 79999886644321 126678999 54
No 32
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=80.03 E-value=2.5 Score=35.40 Aligned_cols=40 Identities=18% Similarity=0.012 Sum_probs=31.2
Q ss_pred CCceEEEE-eCCC-ccchHHHHHHHHHHHhCCCEEEEEeccc
Q 043256 13 KLANCLVL-SYPA-QGHINPLLLFSKRLERKGIKVTIVTTYF 52 (224)
Q Consensus 13 ~~~hvl~~-p~p~-~GH~~P~l~La~~La~~G~~VT~~~t~~ 52 (224)
++.+|+++ +.+. -|+-..+..|++.|+++||+|++++...
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~ 80 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEG 80 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccC
Confidence 34688855 4443 3888899999999999999999988653
No 33
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=79.60 E-value=1.3 Score=37.85 Aligned_cols=40 Identities=25% Similarity=0.188 Sum_probs=29.2
Q ss_pred CCceEEEEe-CCCc----cchHHHHHHHHHHHhCCCEEEEEeccc
Q 043256 13 KLANCLVLS-YPAQ----GHINPLLLFSKRLERKGIKVTIVTTYF 52 (224)
Q Consensus 13 ~~~hvl~~p-~p~~----GH~~P~l~La~~La~~G~~VT~~~t~~ 52 (224)
.+++|+++. .... |=..-+.+||+.|+++||+|++++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 456888554 3222 323468999999999999999999863
No 34
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=78.84 E-value=4.5 Score=32.80 Aligned_cols=86 Identities=15% Similarity=0.159 Sum_probs=52.3
Q ss_pred CCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCCCCCCCCcCCHHHHHHHHHHHhHHHH
Q 043256 23 PAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYDKGGSAQAESDQAYVDRFWQIGLQTL 102 (224)
Q Consensus 23 p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 102 (224)
-|.||+.=.+.||+.|. +|+|++.......+.. . ++.+..++. + +. +.+
T Consensus 13 IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~--~---g~~v~~l~~----~------d~------------~~~ 61 (282)
T 3hbm_A 13 IGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDE--I---PYPVYELSS----E------SI------------YEL 61 (282)
T ss_dssp TBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGG--C---CSCEEECSS----S------CH------------HHH
T ss_pred ccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHH--C---CCeEEEcCc----c------CH------------HHH
Confidence 47899999999999998 7999886533222221 1 133443331 1 11 123
Q ss_pred HHHHHhcCCCcEEEeCCCcc---cHHHHHHHcCCceEEech
Q 043256 103 TELVERMNDVDCIVFDSFLP---WALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 103 ~~ll~~~~~~~~iI~D~~~~---~~~~vA~~lgiP~v~f~t 140 (224)
.+++++. ++|+||.|.... |-..+.+..|++.++|-=
T Consensus 62 ~~~l~~~-~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD 101 (282)
T 3hbm_A 62 INLIKEE-KFELLIIDHYGISVDDEKLIKLETGVKILSFDD 101 (282)
T ss_dssp HHHHHHH-TCSEEEEECTTCCHHHHHHHHHHHCCEEEEECS
T ss_pred HHHHHhC-CCCEEEEECCCCCHHHHHHHHHhcCcEEEEEec
Confidence 3445555 789999998764 333455446888877644
No 35
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=77.58 E-value=3.1 Score=34.47 Aligned_cols=113 Identities=12% Similarity=0.029 Sum_probs=60.5
Q ss_pred CceEEEEe-C--CC-ccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCCCCCCCCcCCHHH
Q 043256 14 LANCLVLS-Y--PA-QGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYDKGGSAQAESDQA 89 (224)
Q Consensus 14 ~~hvl~~p-~--p~-~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 89 (224)
.++|+++. + +. -|+-.-+..|++.|+++||+|++++............... .++..++.. ... ....
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~---~~~~- 90 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSG--GKAVPIPYN---GSV---ARLR- 90 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEEC--CCCC-------------------
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccC--CcEEecccc---CCc---cccc-
Confidence 46888665 2 22 4666889999999999999999999865432111100000 011111100 000 0000
Q ss_pred HHHHHHHHhHHHHHHHHHhcCCCcEEEeCCCcc--cHHHHHHHcCCceEEech
Q 043256 90 YVDRFWQIGLQTLTELVERMNDVDCIVFDSFLP--WALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 90 ~~~~~~~~~~~~l~~ll~~~~~~~~iI~D~~~~--~~~~vA~~lgiP~v~f~t 140 (224)
+ .......+.+++++. ++|+|++..... ++..+++..|+|.+...-
T Consensus 91 -~---~~~~~~~l~~~l~~~-~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h 138 (406)
T 2gek_A 91 -F---GPATHRKVKKWIAEG-DFDVLHIHEPNAPSLSMLALQAAEGPIVATFH 138 (406)
T ss_dssp -C---CHHHHHHHHHHHHHH-CCSEEEEECCCSSSHHHHHHHHEESSEEEEEC
T ss_pred -c---cHHHHHHHHHHHHhc-CCCEEEECCccchHHHHHHHHhcCCCEEEEEc
Confidence 0 000113445566666 799998865443 245677778999887543
No 36
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=77.33 E-value=2.9 Score=37.05 Aligned_cols=40 Identities=15% Similarity=0.262 Sum_probs=29.0
Q ss_pred CCCceEEEEeC---CC--ccch-HHHHHHHHHHHhCCCEEEEEecc
Q 043256 12 SKLANCLVLSY---PA--QGHI-NPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 12 ~~~~hvl~~p~---p~--~GH~-~P~l~La~~La~~G~~VT~~~t~ 51 (224)
+.++||+++.. |. .|=+ .-+-.|++.|+++||+|+++++.
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 45789999852 32 2322 45678999999999999999854
No 37
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=77.03 E-value=4.8 Score=34.01 Aligned_cols=110 Identities=12% Similarity=0.112 Sum_probs=59.5
Q ss_pred eEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecccccc-ccccCCCCCCCeEEEEecC-CCCCCCCCCcCCHHHHHHH
Q 043256 16 NCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISK-SLHRDPSSSISIALETISD-GYDKGGSAQAESDQAYVDR 93 (224)
Q Consensus 16 hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~-~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~~~~ 93 (224)
+|+++ +.+.--++=|..|.++|.++ ++..++.|..... .+..--.. ++.+ .-|+ .+...+ .........
T Consensus 11 ~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~--~~~i-~~~~~~l~~~~----~~~~~~~~~ 81 (385)
T 4hwg_A 11 KVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFD--DMGI-RKPDYFLEVAA----DNTAKSIGL 81 (385)
T ss_dssp EEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC---CCC-CCCSEECCCCC----CCSHHHHHH
T ss_pred heeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHh--hCCC-CCCceecCCCC----CCHHHHHHH
Confidence 44433 34556677777788888777 8888777764432 22110000 0111 0111 111111 112212211
Q ss_pred HHHHhHHHHHHHHHhcCCCcEEEe--CCCcccHHHHHHHcCCceEEec
Q 043256 94 FWQIGLQTLTELVERMNDVDCIVF--DSFLPWALDVAKKFGLTGAAFL 139 (224)
Q Consensus 94 ~~~~~~~~l~~ll~~~~~~~~iI~--D~~~~~~~~vA~~lgiP~v~f~ 139 (224)
+...+++++++. +||+|+. |....|+...|+++|||.+.+.
T Consensus 82 ----~~~~l~~~l~~~-kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~e 124 (385)
T 4hwg_A 82 ----VIEKVDEVLEKE-KPDAVLFYGDTNSCLSAIAAKRRKIPIFHME 124 (385)
T ss_dssp ----HHHHHHHHHHHH-CCSEEEEESCSGGGGGHHHHHHTTCCEEEES
T ss_pred ----HHHHHHHHHHhc-CCcEEEEECCchHHHHHHHHHHhCCCEEEEe
Confidence 234567778777 7998776 5566777778899999987664
No 38
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=76.37 E-value=3.1 Score=30.72 Aligned_cols=41 Identities=17% Similarity=0.171 Sum_probs=35.9
Q ss_pred CCCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccc
Q 043256 12 SKLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYF 52 (224)
Q Consensus 12 ~~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~ 52 (224)
.++++|++...++-+|-+-..-++..|..+|++|.++-...
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~ 56 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQ 56 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBC
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 35679999999999999999999999999999999876543
No 39
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=73.04 E-value=3.9 Score=35.04 Aligned_cols=36 Identities=22% Similarity=0.305 Sum_probs=27.0
Q ss_pred eEEEEeC---C---CccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 16 NCLVLSY---P---AQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 16 hvl~~p~---p---~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
+|+++.. | .-|=-.-+..|++.|+++||+|++++..
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~ 43 (485)
T 1rzu_A 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPG 43 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred eEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 5676643 2 2244567889999999999999999865
No 40
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=72.31 E-value=5.9 Score=30.32 Aligned_cols=44 Identities=14% Similarity=0.012 Sum_probs=37.5
Q ss_pred CCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccc
Q 043256 13 KLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKS 56 (224)
Q Consensus 13 ~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~ 56 (224)
.+.+|++.+.++-.|-+...-++..|..+|++|.++......+.
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~ 130 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGK 130 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 35689999999999999999999999999999999876544333
No 41
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=72.29 E-value=9.8 Score=30.30 Aligned_cols=108 Identities=15% Similarity=0.198 Sum_probs=55.5
Q ss_pred eEEEEeCCCccchHH-HHHHHHHHHhCCCEEEEEecccccccccc-CCCCCCCeEEEEecCC--CCCCCCCCcCCHHHHH
Q 043256 16 NCLVLSYPAQGHINP-LLLFSKRLERKGIKVTIVTTYFISKSLHR-DPSSSISIALETISDG--YDKGGSAQAESDQAYV 91 (224)
Q Consensus 16 hvl~~p~p~~GH~~P-~l~La~~La~~G~~VT~~~t~~~~~~~~~-~~~~~~~i~~~~l~~~--~~~~~~~~~~~~~~~~ 91 (224)
|||+.- --|--.| +..|++.|.+.| +|+++.+....+-... .+... -+++...... ..-+|. ..+-.
T Consensus 3 ~ILlTN--DDGi~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT~~~-pl~~~~~~~~~~~~v~GT-----PaDCV 73 (251)
T 2wqk_A 3 TFLLVN--DDGYFSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTE-PLKMRKIDTDFYTVIDGT-----PADCV 73 (251)
T ss_dssp EEEEEC--SSCTTCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSS-CEEEEEEETTEEEETTCC-----HHHHH
T ss_pred EEEEEc--CCCCCcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcCCCC-CceeEEeeccceeecCCC-----hHHHH
Confidence 444443 2343444 667888888888 5888877655533221 11111 2565554321 001121 11111
Q ss_pred HHHHHHhHHHHHHHHHhcCCCcEEEe----------CCCcccH---HHHHHHcCCceEEech
Q 043256 92 DRFWQIGLQTLTELVERMNDVDCIVF----------DSFLPWA---LDVAKKFGLTGAAFLT 140 (224)
Q Consensus 92 ~~~~~~~~~~l~~ll~~~~~~~~iI~----------D~~~~~~---~~vA~~lgiP~v~f~t 140 (224)
.. .+..++... +||+||+ |.+.+.+ +.-|..+|||.+.|+-
T Consensus 74 ~l-------al~~~l~~~-~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 74 HL-------GYRVILEEK-KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HH-------HHHTTTTTC-CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred hh-------hhhhhcCCC-CCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 10 122334333 7899999 4444333 3455678999999885
No 42
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=71.83 E-value=7 Score=31.10 Aligned_cols=42 Identities=10% Similarity=-0.037 Sum_probs=36.9
Q ss_pred CCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccc
Q 043256 13 KLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFIS 54 (224)
Q Consensus 13 ~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~ 54 (224)
.+.+|++.+.++-+|-+...-++..|..+|++|.++......
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~ 163 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPA 163 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCS
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 467899999999999999999999999999999988765433
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=71.30 E-value=4.7 Score=34.52 Aligned_cols=36 Identities=11% Similarity=0.187 Sum_probs=26.7
Q ss_pred eEEEEeC---C--Cc-cchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 16 NCLVLSY---P--AQ-GHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 16 hvl~~p~---p--~~-GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
+|+++.. | .. |=-.-+..|++.|+++||+|++++..
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~ 43 (485)
T 2qzs_A 2 QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPA 43 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred eEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 5776643 2 23 33456789999999999999999865
No 44
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=68.54 E-value=9.3 Score=27.17 Aligned_cols=41 Identities=7% Similarity=0.019 Sum_probs=35.2
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccc
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFIS 54 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~ 54 (224)
+++|++...++-+|-+-..-++..|..+|++|..+-.....
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~ 43 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQ 43 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 46899999899999999999999999999999987664333
No 45
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=66.76 E-value=13 Score=28.75 Aligned_cols=43 Identities=14% Similarity=0.019 Sum_probs=32.9
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccc
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLH 58 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~ 58 (224)
+.||++.-..+.|-+. ..+|.++|.++| +|.++.|+.-...+.
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~ 61 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLD 61 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCC
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcC
Confidence 4577777666666555 899999999999 999999986654443
No 46
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=63.89 E-value=10 Score=29.37 Aligned_cols=44 Identities=9% Similarity=0.073 Sum_probs=37.4
Q ss_pred CCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccc
Q 043256 13 KLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKS 56 (224)
Q Consensus 13 ~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~ 56 (224)
++.+|++...++-.|-+...-++..|..+|++|..+-.....+.
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~ 134 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNEN 134 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHH
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHH
Confidence 46799999999999999999999999999999999876544433
No 47
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=60.86 E-value=6.5 Score=34.47 Aligned_cols=36 Identities=25% Similarity=0.345 Sum_probs=27.3
Q ss_pred CCCCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 11 SSKLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 11 ~~~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
.+.|+|||++--..-| +.+|++|.++|++||+|...
T Consensus 39 ~~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SCSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 3457899999743333 46789999999999999754
No 48
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=59.67 E-value=12 Score=31.48 Aligned_cols=111 Identities=10% Similarity=0.009 Sum_probs=59.3
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhC-CCEEEEEecccccccccc-CCCCCCCeEE-EEecCCCCCCCCCCcCCHHHHH
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERK-GIKVTIVTTYFISKSLHR-DPSSSISIAL-ETISDGYDKGGSAQAESDQAYV 91 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~-G~~VT~~~t~~~~~~~~~-~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~~~ 91 (224)
.+|+++. ......+=+..|.+.|.++ |+++.++.|......... .. .. +|+. ..+. + .+ .........
T Consensus 26 ~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~-~~-~i~~~~~l~--~--~~--~~~~~~~~~ 96 (396)
T 3dzc_A 26 KKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLE-LF-SITPDFDLN--I--ME--PGQTLNGVT 96 (396)
T ss_dssp EEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHH-HT-TCCCSEECC--C--CC--TTCCHHHHH
T ss_pred CeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHH-hc-CCCCceeee--c--CC--CCCCHHHHH
Confidence 4677665 3445667777788888887 788876666433211110 00 00 1210 1111 1 00 011222211
Q ss_pred HHHHHHhHHHHHHHHHhcCCCcEEEe--CCCcccH-HHHHHHcCCceEEec
Q 043256 92 DRFWQIGLQTLTELVERMNDVDCIVF--DSFLPWA-LDVAKKFGLTGAAFL 139 (224)
Q Consensus 92 ~~~~~~~~~~l~~ll~~~~~~~~iI~--D~~~~~~-~~vA~~lgiP~v~f~ 139 (224)
.. ....+.+++++. +||+|++ |....|+ ...|+.+|||.+.+.
T Consensus 97 ---~~-~~~~l~~~l~~~-kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ 142 (396)
T 3dzc_A 97 ---SK-ILLGMQQVLSSE-QPDVVLVHGDTATTFAASLAAYYQQIPVGHVE 142 (396)
T ss_dssp ---HH-HHHHHHHHHHHH-CCSEEEEETTSHHHHHHHHHHHTTTCCEEEET
T ss_pred ---HH-HHHHHHHHHHhc-CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 11 234567777777 7998876 4444465 568889999988763
No 49
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=59.10 E-value=15 Score=27.43 Aligned_cols=35 Identities=14% Similarity=0.338 Sum_probs=29.5
Q ss_pred ceEEEEeCCCccch-----HHHHHHHHHHHhCCCEEEEEecc
Q 043256 15 ANCLVLSYPAQGHI-----NPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 15 ~hvl~~p~p~~GH~-----~P~l~La~~La~~G~~VT~~~t~ 51 (224)
.+|+++| |.|=. .+..+|++.|.++|.+|.|...+
T Consensus 24 ~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 24 SKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 4788888 66643 58999999999999999998876
No 50
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=58.26 E-value=16 Score=27.42 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=29.3
Q ss_pred ceEEEEeCCCccch-----HHHHHHHHHHHhCCCEEEEEecc
Q 043256 15 ANCLVLSYPAQGHI-----NPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 15 ~hvl~~p~p~~GH~-----~P~l~La~~La~~G~~VT~~~t~ 51 (224)
.+|+++| |.|=. .+..+|++.|.++|.+|.|...+
T Consensus 23 ~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 23 NSIIITP--GYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp SEEEEEE--CHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 4788888 66643 58999999999999999998876
No 51
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=57.32 E-value=16 Score=24.97 Aligned_cols=33 Identities=15% Similarity=0.268 Sum_probs=24.1
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
..+|+++ |.|.+-- .+++.|.++|++|+++...
T Consensus 4 ~m~i~Ii---G~G~iG~--~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIA---GIGRVGY--TLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEE---CCSHHHH--HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE---CCCHHHH--HHHHHHHhCCCeEEEEECC
Confidence 3578887 3466643 5789999999999988654
No 52
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=56.46 E-value=9.9 Score=32.01 Aligned_cols=37 Identities=16% Similarity=0.268 Sum_probs=25.5
Q ss_pred CCceEEEEe---CCCccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 13 KLANCLVLS---YPAQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 13 ~~~hvl~~p---~p~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
.+++|+++. || .+.-.-...+++.|+++| +|++++..
T Consensus 13 ~~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 13 RRPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CCSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CCceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 357899776 55 222223456788999999 99999543
No 53
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=56.20 E-value=17 Score=27.71 Aligned_cols=35 Identities=14% Similarity=0.338 Sum_probs=29.3
Q ss_pred ceEEEEeCCCccch-----HHHHHHHHHHHhCCCEEEEEecc
Q 043256 15 ANCLVLSYPAQGHI-----NPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 15 ~hvl~~p~p~~GH~-----~P~l~La~~La~~G~~VT~~~t~ 51 (224)
.+|+++| |+|=. .+..+|++.|.++|.+|.|...+
T Consensus 47 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 47 SKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcEEEEc--CchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 4788888 66643 58999999999999999998876
No 54
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=55.77 E-value=17 Score=27.74 Aligned_cols=35 Identities=20% Similarity=0.227 Sum_probs=29.3
Q ss_pred ceEEEEeCCCccch-----HHHHHHHHHHHhCCCEEEEEecc
Q 043256 15 ANCLVLSYPAQGHI-----NPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 15 ~hvl~~p~p~~GH~-----~P~l~La~~La~~G~~VT~~~t~ 51 (224)
.+|+++| |+|=. .+..+|++.|.++|.+|.|...+
T Consensus 46 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 46 NSIIITP--GYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEEC--CchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 4788888 66643 58899999999999999998876
No 55
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=54.20 E-value=17 Score=27.27 Aligned_cols=35 Identities=17% Similarity=0.321 Sum_probs=29.3
Q ss_pred ceEEEEeCCCccch-----HHHHHHHHHHHhCCCEEEEEecc
Q 043256 15 ANCLVLSYPAQGHI-----NPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 15 ~hvl~~p~p~~GH~-----~P~l~La~~La~~G~~VT~~~t~ 51 (224)
.+|+++| |.|=. .+..+|++.|.++|.+|.|..-+
T Consensus 31 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 31 HSVIITP--GYGMAVAQAQYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp SEEEEEC--SBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECS
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 4788887 66643 58999999999999999998876
No 56
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=54.06 E-value=22 Score=27.86 Aligned_cols=40 Identities=15% Similarity=0.158 Sum_probs=35.6
Q ss_pred CCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccc
Q 043256 13 KLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYF 52 (224)
Q Consensus 13 ~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~ 52 (224)
.+..|++.--||.|=..-++.+|..|+++|++|.++..+.
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3577889999999999999999999999999998888764
No 57
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=53.32 E-value=15 Score=31.11 Aligned_cols=112 Identities=10% Similarity=-0.007 Sum_probs=58.2
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhC--CCEEEEEecccccccccc-CCCCCCCeEE-EEecCCCCCCCCCCcCCHHH
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERK--GIKVTIVTTYFISKSLHR-DPSSSISIAL-ETISDGYDKGGSAQAESDQA 89 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~--G~~VT~~~t~~~~~~~~~-~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~ 89 (224)
+.+|+++. .......=+..|.++|.++ |+++.++.|....+.... .. .. +++. ..+. + ..+ ......
T Consensus 27 ~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~-~~-~i~~~~~l~--v-~~~---~~~~~~ 97 (403)
T 3ot5_A 27 KIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLE-IF-DIKPDIDLD--I-MKK---GQTLAE 97 (403)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHH-HT-TCCCSEECC--C-CC----CCCHHH
T ss_pred cceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHH-hc-CCCCCcccc--c-CCC---CCCHHH
Confidence 35787666 3334566667788889887 688876666533211110 00 00 1210 1111 1 000 112221
Q ss_pred HHHHHHHHhHHHHHHHHHhcCCCcEEEe--CCCcccH-HHHHHHcCCceEEec
Q 043256 90 YVDRFWQIGLQTLTELVERMNDVDCIVF--DSFLPWA-LDVAKKFGLTGAAFL 139 (224)
Q Consensus 90 ~~~~~~~~~~~~l~~ll~~~~~~~~iI~--D~~~~~~-~~vA~~lgiP~v~f~ 139 (224)
. ... ....+.+++++. +||+|++ |....|+ ...|+.+|||.+.+.
T Consensus 98 ~---~~~-~~~~l~~~l~~~-kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 98 I---TSR-VMNGINEVIAAE-NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp H---HHH-HHHHHHHHHHHH-CCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred H---HHH-HHHHHHHHHHHc-CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 1 111 234567777777 8998876 4445564 578889999987654
No 58
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=53.06 E-value=24 Score=27.22 Aligned_cols=41 Identities=12% Similarity=-0.042 Sum_probs=31.5
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecccccc
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISK 55 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~ 55 (224)
+.||++-=..+.|-+- ..+|.++|.++|++|.++.|+.-..
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~ 44 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQL 44 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHH
Confidence 3477766655656555 8999999999999999999975543
No 59
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=52.47 E-value=11 Score=26.80 Aligned_cols=33 Identities=15% Similarity=0.293 Sum_probs=25.9
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
+.||+++- .|++- ..+++.|.++|++|+++...
T Consensus 3 ~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 35888884 35554 67899999999999999874
No 60
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=50.72 E-value=16 Score=26.00 Aligned_cols=37 Identities=19% Similarity=0.178 Sum_probs=28.4
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccc
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFIS 54 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~ 54 (224)
.+++++. |-.=+.|++.+++.|.++|.+|+++ ...+.
T Consensus 19 ~~~llIa--GG~GiaPl~sm~~~l~~~~~~v~l~-g~R~~ 55 (142)
T 3lyu_A 19 GKILAIG--AYTGIVEVYPIAKAWQEIGNDVTTL-HVTFE 55 (142)
T ss_dssp SEEEEEE--ETTHHHHHHHHHHHHHHTTCEEEEE-EEEEG
T ss_pred CeEEEEE--CcCcHHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 4677766 3334899999999999999999998 54443
No 61
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=50.42 E-value=60 Score=27.22 Aligned_cols=96 Identities=17% Similarity=0.229 Sum_probs=49.5
Q ss_pred CCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccccccCCCCCCCeEEEEecCCCCCCCCCCcCCHHHHHH
Q 043256 13 KLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSLHRDPSSSISIALETISDGYDKGGSAQAESDQAYVD 92 (224)
Q Consensus 13 ~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~ 92 (224)
++.|++++.- + -|...+ .+...+.|++|+++.+........ ... .=.++.++. . . +.....+
T Consensus 4 ~~k~l~Il~~-~-~~~~~i---~~aa~~lG~~vv~v~~~~~~~~~~---~~~-~d~~~~~~~-~--~------d~~~~~~ 65 (425)
T 3vot_A 4 RNKNLAIICQ-N-KHLPFI---FEEAERLGLKVTFFYNSAEDFPGN---LPA-VERCVPLPL-F--E------DEEAAMD 65 (425)
T ss_dssp CCCEEEEECC-C-TTCCHH---HHHHHHTTCEEEEEEETTSCCCCS---CTT-EEEEEEECT-T--T------CHHHHHH
T ss_pred CCcEEEEECC-C-hhHHHH---HHHHHHCCCEEEEEECCCcccccC---Hhh-ccEEEecCC-C--C------CHHHHHH
Confidence 4567887752 2 233333 455556799999887653321100 011 013333331 1 1 1111221
Q ss_pred HHHHHhHHHHHHHHHhcCCCcEEEe--CCCcccHHHHHHHcCCce
Q 043256 93 RFWQIGLQTLTELVERMNDVDCIVF--DSFLPWALDVAKKFGLTG 135 (224)
Q Consensus 93 ~~~~~~~~~l~~ll~~~~~~~~iI~--D~~~~~~~~vA~~lgiP~ 135 (224)
.+.++.++. ++|.|+. |.....+..+|+++|+|.
T Consensus 66 --------~~~~~~~~~-~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 66 --------VVRQTFVEF-PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp --------HHHHHHHHS-CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred --------HHHHhhhhc-CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 234444555 7898875 444455678899999994
No 62
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=50.17 E-value=97 Score=24.78 Aligned_cols=99 Identities=11% Similarity=0.042 Sum_probs=60.4
Q ss_pred eEEEEeCCCccchHHHHHHHHHHHhC--CCEEEEEeccccccccccCCCCCCCe-EEEEecCCCCCCCCCCcCCHHHHHH
Q 043256 16 NCLVLSYPAQGHINPLLLFSKRLERK--GIKVTIVTTYFISKSLHRDPSSSISI-ALETISDGYDKGGSAQAESDQAYVD 92 (224)
Q Consensus 16 hvl~~p~p~~GH~~P~l~La~~La~~--G~~VT~~~t~~~~~~~~~~~~~~~~i-~~~~l~~~~~~~~~~~~~~~~~~~~ 92 (224)
+|+++-.-+.|-+.=...+.+.|.++ |.+|++++.+...+.+.. .+ .+ +++.++. .... ...
T Consensus 2 kILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~--~p--~i~~v~~~~~---~~~~---~~~----- 66 (348)
T 1psw_A 2 KILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR--MP--EVNEAIPMPL---GHGA---LEI----- 66 (348)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT--CT--TEEEEEEC-------------CH-----
T ss_pred eEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc--CC--ccCEEEEecC---Cccc---cch-----
Confidence 68899888889998888899999886 999999999866554432 22 25 3444331 0000 011
Q ss_pred HHHHHhHHHHHHHHHhcC--CCcEEEeCCCccc-HHHHHHHcCCceEE
Q 043256 93 RFWQIGLQTLTELVERMN--DVDCIVFDSFLPW-ALDVAKKFGLTGAA 137 (224)
Q Consensus 93 ~~~~~~~~~l~~ll~~~~--~~~~iI~D~~~~~-~~~vA~~lgiP~v~ 137 (224)
..+.++.+.+. ++|++| |....+ ...++...|+|..+
T Consensus 67 -------~~~~~l~~~l~~~~~D~vi-d~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 67 -------GERRKLGHSLREKRYDRAY-VLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -------HHHHHHHHHTTTTTCSEEE-ECSCCSGGGHHHHHTTCSEEE
T ss_pred -------HHHHHHHHHHHhcCCCEEE-ECCCChHHHHHHHHhCCCEEe
Confidence 01122333332 799888 554333 45678888999743
No 63
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=50.13 E-value=28 Score=25.96 Aligned_cols=41 Identities=15% Similarity=0.054 Sum_probs=30.6
Q ss_pred eEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecccccccc
Q 043256 16 NCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSL 57 (224)
Q Consensus 16 hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~ 57 (224)
||++.-. |.....=..+|.++|.++|++|.++.|+.-.+.+
T Consensus 7 ~IllgvT-Gs~aa~k~~~ll~~L~~~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 7 NVLICLC-GSVNSINISHYIIELKSKFDEVNVIASTNGRKFI 47 (175)
T ss_dssp EEEEEEC-SSGGGGGHHHHHHHHTTTCSEEEEEECTGGGGGS
T ss_pred EEEEEEe-CHHHHHHHHHHHHHHHHCCCEEEEEECcCHHHHh
Confidence 6665544 4455556899999999999999999998655443
No 64
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=48.17 E-value=14 Score=28.06 Aligned_cols=43 Identities=21% Similarity=0.314 Sum_probs=30.7
Q ss_pred HHHHHHHhcC--CCcEEEeCCCcccHHHHHHHcCCceEEechhhHHHH
Q 043256 101 TLTELVERMN--DVDCIVFDSFLPWALDVAKKFGLTGAAFLTQSCAVA 146 (224)
Q Consensus 101 ~l~~ll~~~~--~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t~~a~~~ 146 (224)
.+++.++++. .+++||.|.. +...|+++|+|.+...++-.+..
T Consensus 130 e~~~~i~~l~~~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eSI~ 174 (196)
T 2q5c_A 130 EITTLISKVKTENIKIVVSGKT---VTDEAIKQGLYGETINSGEESLR 174 (196)
T ss_dssp GHHHHHHHHHHTTCCEEEECHH---HHHHHHHTTCEEEECCCCHHHHH
T ss_pred HHHHHHHHHHHCCCeEEECCHH---HHHHHHHcCCcEEEEecCHHHHH
Confidence 4444444432 7999999864 57999999999998887444433
No 65
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=47.28 E-value=73 Score=23.21 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=26.9
Q ss_pred eCCCccchHHHHHHHHHHHhCCCEEEEEeccc
Q 043256 21 SYPAQGHINPLLLFSKRLERKGIKVTIVTTYF 52 (224)
Q Consensus 21 p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~ 52 (224)
+-.|.|=-.-...||..|+++|.+|.++-.+.
T Consensus 9 ~kgG~GKTt~a~~la~~la~~g~~vlliD~D~ 40 (206)
T 4dzz_A 9 PKGGSGKTTAVINIATALSRSGYNIAVVDTDP 40 (206)
T ss_dssp SSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCccHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 34567888889999999999999999987763
No 66
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=47.07 E-value=25 Score=24.67 Aligned_cols=30 Identities=3% Similarity=-0.054 Sum_probs=24.0
Q ss_pred ccchHHHHHHHHHHHhCCCEEEEEeccccc
Q 043256 25 QGHINPLLLFSKRLERKGIKVTIVTTYFIS 54 (224)
Q Consensus 25 ~GH~~P~l~La~~La~~G~~VT~~~t~~~~ 54 (224)
......-+.+|...++.|++|+++-+..-.
T Consensus 29 ~~~~~~al~lA~~A~a~g~eV~vFf~~dGV 58 (134)
T 3mc3_A 29 LDRTYAPLFMASISASMEYETSVFFMIXGP 58 (134)
T ss_dssp THHHHHHHHHHHHHHHTTCEEEEEECTTGG
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEeCcH
Confidence 466678889999999999999988776433
No 67
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=46.04 E-value=15 Score=28.45 Aligned_cols=31 Identities=13% Similarity=0.075 Sum_probs=24.4
Q ss_pred CCcEEEeCCCcccHHHHHHHcCCceEEechh
Q 043256 111 DVDCIVFDSFLPWALDVAKKFGLTGAAFLTQ 141 (224)
Q Consensus 111 ~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t~ 141 (224)
.+.+||+|---..+...|+++|||++.+-..
T Consensus 31 eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~ 61 (211)
T 3p9x_A 31 EVALLITDKPGAKVVERVKVHEIPVCALDPK 61 (211)
T ss_dssp EEEEEEESCSSSHHHHHHHTTTCCEEECCGG
T ss_pred EEEEEEECCCCcHHHHHHHHcCCCEEEeChh
Confidence 4688999864445678999999999987654
No 68
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=45.68 E-value=14 Score=29.39 Aligned_cols=32 Identities=28% Similarity=0.411 Sum_probs=22.8
Q ss_pred eEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 16 NCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 16 hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
+|++.- |.|.+= .+|+++|.++||+|+.++-.
T Consensus 2 kILVTG--atGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 2 RVLVGG--GTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp EEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred EEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 555554 445443 46799999999999998753
No 69
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=45.20 E-value=26 Score=26.62 Aligned_cols=41 Identities=7% Similarity=-0.113 Sum_probs=29.7
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccc
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKS 56 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~ 56 (224)
.||++.-. |.+...=..+|.+.|.++|++|.++.|+.-...
T Consensus 9 k~IllgvT-Gs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~~f 49 (194)
T 1p3y_1 9 KKLLIGIC-GSISSVGISSYLLYFKSFFKEIRVVMTKTAEDL 49 (194)
T ss_dssp CEEEEEEC-SCGGGGGTHHHHHHHTTTSSEEEEEECHHHHHH
T ss_pred CEEEEEEE-CHHHHHHHHHHHHHHHHCCCEEEEEEchhHHHH
Confidence 46665544 444444578999999999999999999755433
No 70
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=44.68 E-value=20 Score=24.87 Aligned_cols=33 Identities=15% Similarity=0.037 Sum_probs=22.0
Q ss_pred HHHhcCCCcEEEeCCCccc--HHHHHHH---cCCceEEe
Q 043256 105 LVERMNDVDCIVFDSFLPW--ALDVAKK---FGLTGAAF 138 (224)
Q Consensus 105 ll~~~~~~~~iI~D~~~~~--~~~vA~~---lgiP~v~f 138 (224)
++++. +||+||.|..++. +.+++++ .++|.+..
T Consensus 48 ~~~~~-~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 48 IARKG-QFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHC-CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHhC-CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 34444 8999999998864 3455554 47886543
No 71
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=44.47 E-value=23 Score=27.64 Aligned_cols=38 Identities=16% Similarity=0.330 Sum_probs=28.9
Q ss_pred HHHHHHHHhcC--CCcEEEeCCCcccHHHHHHHcCCceEEech
Q 043256 100 QTLTELVERMN--DVDCIVFDSFLPWALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 100 ~~l~~ll~~~~--~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t 140 (224)
+..++.++++. .+++||.|.. +...|+++|+|.+...+
T Consensus 141 ee~~~~i~~l~~~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 141 EDARGQINELKANGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHTTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHCCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 44555555443 7999999864 57999999999998885
No 72
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=44.10 E-value=29 Score=24.42 Aligned_cols=32 Identities=25% Similarity=0.334 Sum_probs=23.5
Q ss_pred CCcEEEeCCCccc--HHHHHHHc-------CCceEEechhh
Q 043256 111 DVDCIVFDSFLPW--ALDVAKKF-------GLTGAAFLTQS 142 (224)
Q Consensus 111 ~~~~iI~D~~~~~--~~~vA~~l-------giP~v~f~t~~ 142 (224)
+||+||.|..++. +.++++++ ++|.+.++..+
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 7999999998874 56676654 58877765543
No 73
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=43.38 E-value=33 Score=26.14 Aligned_cols=101 Identities=14% Similarity=0.178 Sum_probs=60.1
Q ss_pred ccCCCCCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccc------cccccCCCCCCCeEEEEecCCCCCCCC
Q 043256 8 ASASSKLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFIS------KSLHRDPSSSISIALETISDGYDKGGS 81 (224)
Q Consensus 8 ~~~~~~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~------~~~~~~~~~~~~i~~~~l~~~~~~~~~ 81 (224)
+.....+..|+++.-+|.|=..-.+.+|.+.+.+|.+|-|+..-... ..+.. . .+++.....++. .
T Consensus 22 ~~~~~~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~--L---~v~~~~~g~gf~---~ 93 (196)
T 1g5t_A 22 AQAQEERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP--H---GVEFQVMATGFT---W 93 (196)
T ss_dssp -----CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG--G---TCEEEECCTTCC---C
T ss_pred hhccccCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh--C---CcEEEEcccccc---c
Confidence 33334567899999999999999999999999999999999653321 11111 1 267776654441 1
Q ss_pred CCcCCHHHHHHHHHHHhHHHHHHHHHhcC--CCcEEEeCCCc
Q 043256 82 AQAESDQAYVDRFWQIGLQTLTELVERMN--DVDCIVFDSFL 121 (224)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~~--~~~~iI~D~~~ 121 (224)
...+...-. ......++.+.+.+. ++|+||.|-+.
T Consensus 94 -~~~~~~~~~----~~a~~~l~~a~~~l~~~~yDlvILDEi~ 130 (196)
T 1g5t_A 94 -ETQNREADT----AACMAVWQHGKRMLADPLLDMVVLDELT 130 (196)
T ss_dssp -CGGGHHHHH----HHHHHHHHHHHHHTTCTTCSEEEEETHH
T ss_pred -CCCCcHHHH----HHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 111111111 112334444444442 79999999864
No 74
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=42.89 E-value=30 Score=26.58 Aligned_cols=30 Identities=17% Similarity=0.187 Sum_probs=23.2
Q ss_pred CCcEEEeCCCcccHHHHHHHcCCceEEech
Q 043256 111 DVDCIVFDSFLPWALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 111 ~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t 140 (224)
.+.+||+|---.-+...|+++|||++.+-.
T Consensus 36 ~I~~Visn~~~a~~l~~A~~~gIp~~~~~~ 65 (209)
T 4ds3_A 36 EIVAVFSDKAEAGGLAKAEAAGIATQVFKR 65 (209)
T ss_dssp EEEEEEESCTTCTHHHHHHHTTCCEEECCG
T ss_pred EEEEEEECCcccHHHHHHHHcCCCEEEeCc
Confidence 467899985434457899999999998754
No 75
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=42.24 E-value=36 Score=25.97 Aligned_cols=40 Identities=20% Similarity=0.064 Sum_probs=30.5
Q ss_pred ceEEEEeCCCccchH-HHHHHHHHHHhCCCEEEEEecccccc
Q 043256 15 ANCLVLSYPAQGHIN-PLLLFSKRLERKGIKVTIVTTYFISK 55 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~-P~l~La~~La~~G~~VT~~~t~~~~~ 55 (224)
.||++- .-|.+... =..+|.++|.++|++|.++.|+.-..
T Consensus 8 k~I~lg-iTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~ 48 (201)
T 3lqk_A 8 KHVGFG-LTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQT 48 (201)
T ss_dssp CEEEEE-CCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCC
T ss_pred CEEEEE-EEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHH
Confidence 466544 44556666 79999999999999999999875443
No 76
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=41.60 E-value=15 Score=27.44 Aligned_cols=18 Identities=22% Similarity=0.305 Sum_probs=15.8
Q ss_pred HHHHHHHHhCCCEEEEEe
Q 043256 32 LLFSKRLERKGIKVTIVT 49 (224)
Q Consensus 32 l~La~~La~~G~~VT~~~ 49 (224)
+.+|..|+++|++|+++=
T Consensus 15 L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCCEEEEE
Confidence 678899999999999984
No 77
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=40.55 E-value=39 Score=25.28 Aligned_cols=41 Identities=12% Similarity=0.038 Sum_probs=30.1
Q ss_pred eEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecccccccc
Q 043256 16 NCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKSL 57 (224)
Q Consensus 16 hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~~ 57 (224)
||++.-. |.+...=..+|.++|.++|++|.++.|+.-.+.+
T Consensus 4 ~IllgvT-Gs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi 44 (181)
T 1g63_A 4 KLLICAT-ASINVININHYIVELKQHFDEVNILFSPSSKNFI 44 (181)
T ss_dssp CEEEEEC-SCGGGGGHHHHHHHHTTTSSCEEEEECGGGGGTS
T ss_pred EEEEEEE-CHHHHHHHHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 5554443 4445557899999999999999999998655444
No 78
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=40.42 E-value=33 Score=30.82 Aligned_cols=44 Identities=5% Similarity=-0.025 Sum_probs=37.8
Q ss_pred CCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccccc
Q 043256 13 KLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISKS 56 (224)
Q Consensus 13 ~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~~ 56 (224)
.+.+||+.+.++-.|-+...-++..|..+|++|..+......+.
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~ 140 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEK 140 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 46799999999999999999999999999999999876544433
No 79
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=39.96 E-value=48 Score=21.84 Aligned_cols=32 Identities=22% Similarity=0.346 Sum_probs=22.4
Q ss_pred CCcEEEeCCCccc--HHHHHHHc-------CCceEEechhh
Q 043256 111 DVDCIVFDSFLPW--ALDVAKKF-------GLTGAAFLTQS 142 (224)
Q Consensus 111 ~~~~iI~D~~~~~--~~~vA~~l-------giP~v~f~t~~ 142 (224)
+||+||.|..++. +..+.+++ ++|.+++....
T Consensus 46 ~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 46 TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 7999999987753 45566544 57877766543
No 80
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A*
Probab=39.68 E-value=39 Score=31.00 Aligned_cols=41 Identities=12% Similarity=0.101 Sum_probs=32.4
Q ss_pred CCceEEEEeCCCc---cchHHHHH-HHHHHHh-CCCEEEEEecccc
Q 043256 13 KLANCLVLSYPAQ---GHINPLLL-FSKRLER-KGIKVTIVTTYFI 53 (224)
Q Consensus 13 ~~~hvl~~p~p~~---GH~~P~l~-La~~La~-~G~~VT~~~t~~~ 53 (224)
.+.||+..|..+. ||..|++. |.+.+.. -||+|+|+.++..
T Consensus 381 ~~l~~~~~ps~g~lHLGh~v~~~k~l~~~~~~~~g~~v~ilIaD~~ 426 (690)
T 3p0j_A 381 KPHACMWMPALLKVPLDVAEGMIKVTKDFIAAHPEGTVTLVLPDWS 426 (690)
T ss_dssp SCEEEEECCCCSSCBHHHHHHHHHHHHHHHHHCSSCEEEEEECTTH
T ss_pred CcceEEecCCCCCcccchHHHHHHHHHHHHHHcCCCeEEEEEecch
Confidence 4678999997776 99999998 7765544 3999999998744
No 81
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=38.69 E-value=46 Score=25.33 Aligned_cols=39 Identities=13% Similarity=0.122 Sum_probs=28.3
Q ss_pred eEEEEeCCCccchHHHHHHHHHHHhC-CCEEEEEecccccc
Q 043256 16 NCLVLSYPAQGHINPLLLFSKRLERK-GIKVTIVTTYFISK 55 (224)
Q Consensus 16 hvl~~p~p~~GH~~P~l~La~~La~~-G~~VT~~~t~~~~~ 55 (224)
+|++--..+.|- .=..+|.++|.++ |++|.++.|+.-..
T Consensus 2 ~IllgvTGsiaa-~k~~~ll~~L~~~~g~~V~vv~T~~A~~ 41 (197)
T 1sbz_A 2 KLIVGMTGATGA-PLGVALLQALREMPNVETHLVMSKWAKT 41 (197)
T ss_dssp EEEEEECSSSCH-HHHHHHHHHHHTCTTCEEEEEECHHHHH
T ss_pred EEEEEEeChHHH-HHHHHHHHHHHhccCCEEEEEECchHHH
Confidence 455444444444 4589999999998 99999999875443
No 82
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=38.16 E-value=26 Score=25.30 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=28.6
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccc
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFIS 54 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~ 54 (224)
.+++++. .|.| +.|++.+++.|.++|.+|+++ ...+.
T Consensus 24 ~~~llIa-GG~G-ItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 24 GKILAIG-AYTG-IVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp SEEEEEE-ETTH-HHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred CeEEEEE-ccCc-HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 4666665 3455 899999999999999999998 65443
No 83
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=38.10 E-value=44 Score=25.78 Aligned_cols=30 Identities=13% Similarity=0.324 Sum_probs=22.8
Q ss_pred CCcEEEeCCCcccHHHHHHHcCCceEEech
Q 043256 111 DVDCIVFDSFLPWALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 111 ~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t 140 (224)
.+.+||+|---.-+...|+++|||++.+-.
T Consensus 37 ~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~ 66 (215)
T 3kcq_A 37 VISCVISNNAEARGLLIAQSYGIPTFVVKR 66 (215)
T ss_dssp EEEEEEESCTTCTHHHHHHHTTCCEEECCB
T ss_pred EEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 467899985433467899999999998754
No 84
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=37.72 E-value=42 Score=24.51 Aligned_cols=44 Identities=25% Similarity=0.378 Sum_probs=32.1
Q ss_pred ceEE-EEeCCCccc-hHHHHHHHHHHHhCCCEEEEEeccccccccc
Q 043256 15 ANCL-VLSYPAQGH-INPLLLFSKRLERKGIKVTIVTTYFISKSLH 58 (224)
Q Consensus 15 ~hvl-~~p~p~~GH-~~P~l~La~~La~~G~~VT~~~t~~~~~~~~ 58 (224)
.+++ ++-.|-.-= +--.+-|+.+|-.+||+||+..++.-.+.++
T Consensus 7 m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLle 52 (157)
T 1kjn_A 7 GKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQ 52 (157)
T ss_dssp CEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred eeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhee
Confidence 3444 666665544 4447889999999999999999987665543
No 85
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=37.53 E-value=24 Score=24.61 Aligned_cols=34 Identities=21% Similarity=0.357 Sum_probs=25.9
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccc
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYF 52 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~ 52 (224)
+.||+++-+.-.| ..+++.|.++|++|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 4689888753334 367899999999999998754
No 86
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=37.38 E-value=35 Score=26.25 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=27.4
Q ss_pred ceEEEEeCCCccchHH-HHHHHHHHHhCCCEEEEEeccccc
Q 043256 15 ANCLVLSYPAQGHINP-LLLFSKRLERKGIKVTIVTTYFIS 54 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P-~l~La~~La~~G~~VT~~~t~~~~ 54 (224)
.||++-=. |.+...- ..+|.++|.++|++|.++.|+.-.
T Consensus 6 k~IllgiT-Gsiaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 6 KRIGFGFT-GSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp CEEEEEEC-SCGGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CEEEEEEE-ChHHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 36654433 4455555 789999999999999999987544
No 87
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=36.72 E-value=42 Score=28.97 Aligned_cols=31 Identities=16% Similarity=0.192 Sum_probs=20.2
Q ss_pred HHHHHhcCCCcEEEeCCCcccHHHHHHHcCCceEE
Q 043256 103 TELVERMNDVDCIVFDSFLPWALDVAKKFGLTGAA 137 (224)
Q Consensus 103 ~~ll~~~~~~~~iI~D~~~~~~~~vA~~lgiP~v~ 137 (224)
++++++. ++|+||... +...+|+++|||.+.
T Consensus 368 e~~i~~~-~pDllig~~---~~~~~a~k~gip~~~ 398 (458)
T 3pdi_B 368 EHAARAG-QAQLVIGNS---HALASARRLGVPLLR 398 (458)
T ss_dssp HHHHHHH-TCSEEEECT---THHHHHHHTTCCEEE
T ss_pred HHHHHhc-CCCEEEECh---hHHHHHHHcCCCEEE
Confidence 3444444 677777764 356788888888774
No 88
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=36.64 E-value=27 Score=27.34 Aligned_cols=21 Identities=24% Similarity=0.325 Sum_probs=17.9
Q ss_pred HHHHHHHHhCCCEEEEEeccc
Q 043256 32 LLFSKRLERKGIKVTIVTTYF 52 (224)
Q Consensus 32 l~La~~La~~G~~VT~~~t~~ 52 (224)
..+|+.++.+|++||++..+.
T Consensus 33 ~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 33 KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHCCCEEEEEeCCc
Confidence 356999999999999998764
No 89
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=36.41 E-value=41 Score=27.68 Aligned_cols=37 Identities=8% Similarity=0.121 Sum_probs=26.9
Q ss_pred eEEEE-eC-CCc-cchHHHHHHHHHHHhCCCEEEEEecccc
Q 043256 16 NCLVL-SY-PAQ-GHINPLLLFSKRLERKGIKVTIVTTYFI 53 (224)
Q Consensus 16 hvl~~-p~-p~~-GH~~P~l~La~~La~~G~~VT~~~t~~~ 53 (224)
+|+++ ++ |.. |.-.-...|++.|+++ |+|++++....
T Consensus 2 kI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~ 41 (413)
T 3oy2_A 2 KLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAF 41 (413)
T ss_dssp EEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCC
T ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCC
Confidence 56655 32 333 5556788999999999 99999886543
No 90
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=34.83 E-value=46 Score=27.05 Aligned_cols=32 Identities=6% Similarity=0.015 Sum_probs=26.3
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEec
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTT 50 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t 50 (224)
.||.++-.-+.| |-.+|+.|.++|++|+..=.
T Consensus 5 ~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 5 KHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 478888888877 55699999999999998654
No 91
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=34.20 E-value=43 Score=27.02 Aligned_cols=113 Identities=10% Similarity=0.008 Sum_probs=59.1
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhC-C-CEEEEEecccccccccc-CCCCCCCeEE-EEecCCCCCCCCCCcCCHHH
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERK-G-IKVTIVTTYFISKSLHR-DPSSSISIAL-ETISDGYDKGGSAQAESDQA 89 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~-G-~~VT~~~t~~~~~~~~~-~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~ 89 (224)
+++|+++. ...++......+++.|.++ | ++|+++++......... .... ++.. ..++-.. + + .+...
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~-~----~~~~~ 78 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIF--GITPDFDLNIMK-D-R----QTLID 78 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHH--TCCCSEECCCCC-T-T----CCHHH
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHc--CCCCccccccCC-C-c----ccHHH
Confidence 36888876 3357777888999999987 5 88877776533211110 0000 1211 1121110 1 1 11111
Q ss_pred HHHHHHHHhHHHHHHHHHhcCCCcEEEeCCCc--cc-HHHHHHHcCCceEEech
Q 043256 90 YVDRFWQIGLQTLTELVERMNDVDCIVFDSFL--PW-ALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 90 ~~~~~~~~~~~~l~~ll~~~~~~~~iI~D~~~--~~-~~~vA~~lgiP~v~f~t 140 (224)
.. .. ....+..++++. +||+|++-... .+ +..+|+..|+|.+....
T Consensus 79 ~~---~~-~~~~l~~~l~~~-~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~ 127 (375)
T 3beo_A 79 IT---TR-GLEGLDKVMKEA-KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEA 127 (375)
T ss_dssp HH---HH-HHHHHHHHHHHH-CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESC
T ss_pred HH---HH-HHHHHHHHHHHh-CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEec
Confidence 11 11 122355666766 79999884321 22 23567889999986543
No 92
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=33.53 E-value=34 Score=28.05 Aligned_cols=29 Identities=28% Similarity=0.387 Sum_probs=21.7
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEE
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIV 48 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~ 48 (224)
+||+++--.-.| +-+|..|+++|++|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 467777533334 67788999999999998
No 93
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=32.47 E-value=56 Score=25.56 Aligned_cols=34 Identities=15% Similarity=0.260 Sum_probs=26.2
Q ss_pred eEEEE-eC-CCccchHHHHHHHHHHHhCCCEEEEEe
Q 043256 16 NCLVL-SY-PAQGHINPLLLFSKRLERKGIKVTIVT 49 (224)
Q Consensus 16 hvl~~-p~-p~~GH~~P~l~La~~La~~G~~VT~~~ 49 (224)
+.+++ .. .+.|=-.-.+.|++.|.++|.+|.++=
T Consensus 22 k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 22 HMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp EEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 44444 33 455888899999999999999999874
No 94
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=31.95 E-value=70 Score=24.04 Aligned_cols=39 Identities=18% Similarity=0.067 Sum_probs=30.3
Q ss_pred eEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecccccc
Q 043256 16 NCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFISK 55 (224)
Q Consensus 16 hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~~ 55 (224)
||++.-..+.|-+ =..+|.++|.++|++|.++.|+.-..
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~ 41 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKV 41 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHH
Confidence 6776666666644 57899999999999999999975443
No 95
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=31.93 E-value=65 Score=22.64 Aligned_cols=33 Identities=15% Similarity=0.253 Sum_probs=24.5
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
..+|+++- .|.+- ..+++.|..+|++|+++...
T Consensus 19 ~~~v~IiG---~G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFG---CGRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 46888885 35443 44688999999999988754
No 96
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=31.69 E-value=70 Score=25.65 Aligned_cols=39 Identities=21% Similarity=0.320 Sum_probs=28.9
Q ss_pred CCCceEEEEeCCCccchHHH--HHHHHHHHhCC-CEEEEEecc
Q 043256 12 SKLANCLVLSYPAQGHINPL--LLFSKRLERKG-IKVTIVTTY 51 (224)
Q Consensus 12 ~~~~hvl~~p~p~~GH~~P~--l~La~~La~~G-~~VT~~~t~ 51 (224)
.++.+||++. -..+|-.+- -.|++.|.+.| ++|++...+
T Consensus 2 ~~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 3678999994 233897554 57778888888 999998764
No 97
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=31.44 E-value=96 Score=23.22 Aligned_cols=36 Identities=19% Similarity=0.171 Sum_probs=25.7
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
.+|+++-+++.- ..-+......|...|++|++++..
T Consensus 10 ~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (208)
T 3ot1_A 10 KRILVPVAHGSE-EMETVIIVDTLVRAGFQVTMAAVG 45 (208)
T ss_dssp CEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcC
Confidence 378877777654 344445556777789999999885
No 98
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=31.31 E-value=50 Score=26.66 Aligned_cols=42 Identities=21% Similarity=0.104 Sum_probs=27.9
Q ss_pred CCCccccccCCCCCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 1 MENNEKKASASSKLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 1 ~~~~~~m~~~~~~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
|-++++|.. .+|++.- +.|.+- .+|+++|+++|++|+.+.-.
T Consensus 1 mi~~~~~~~-----~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 1 MINNSFWQG-----KRVFVTG--HTGFKG--GWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp -CCHHHHTT-----CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCchhhCC-----CEEEEEC--CCchHH--HHHHHHHHhCCCeEEEEeCC
Confidence 556666643 3566664 555553 46788999999999987643
No 99
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=30.73 E-value=32 Score=28.27 Aligned_cols=22 Identities=9% Similarity=-0.073 Sum_probs=18.4
Q ss_pred HHHHHHHHhCCCEEEEEecccc
Q 043256 32 LLFSKRLERKGIKVTIVTTYFI 53 (224)
Q Consensus 32 l~La~~La~~G~~VT~~~t~~~ 53 (224)
..+|+.++.+|++||+++.+..
T Consensus 69 ~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 69 ATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHCCCEEEEEecCCC
Confidence 4578999999999999998643
No 100
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=30.56 E-value=58 Score=24.87 Aligned_cols=44 Identities=23% Similarity=0.114 Sum_probs=30.1
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHh-CCCEEEEEeccccccccc
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLER-KGIKVTIVTTYFISKSLH 58 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~-~G~~VT~~~t~~~~~~~~ 58 (224)
+.||++.-..+ +...-..+|.++|.+ +|++|.++.|+.-.+.+.
T Consensus 19 ~k~IllgvTGs-iaa~k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~ 63 (206)
T 1qzu_A 19 KFHVLVGVTGS-VAALKLPLLVSKLLDIPGLEVAVVTTERAKHFYS 63 (206)
T ss_dssp SEEEEEEECSS-GGGGTHHHHHHHHC---CEEEEEEECTGGGGSSC
T ss_pred CCEEEEEEeCh-HHHHHHHHHHHHHhcccCCEEEEEECHhHHHHhC
Confidence 34666555444 445567999999999 899999999986654443
No 101
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=30.56 E-value=1e+02 Score=20.60 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=21.6
Q ss_pred CCcEEEeCCCccc--HHHHHHHc-------CCceEEechhh
Q 043256 111 DVDCIVFDSFLPW--ALDVAKKF-------GLTGAAFLTQS 142 (224)
Q Consensus 111 ~~~~iI~D~~~~~--~~~vA~~l-------giP~v~f~t~~ 142 (224)
++|+||.|..++. +.++.+++ ++|.+++....
T Consensus 48 ~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 48 LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 7999999988753 44454433 57877766543
No 102
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=29.68 E-value=56 Score=25.26 Aligned_cols=39 Identities=15% Similarity=0.219 Sum_probs=29.8
Q ss_pred CCceEEEEe--CCCccchHHHHHHHHHHHhCCCEEEEEeccc
Q 043256 13 KLANCLVLS--YPAQGHINPLLLFSKRLERKGIKVTIVTTYF 52 (224)
Q Consensus 13 ~~~hvl~~p--~p~~GH~~P~l~La~~La~~G~~VT~~~t~~ 52 (224)
++.+++.|- -.|.|=-.-...||..|+ +|.+|-++-.+.
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~ 65 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDT 65 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECT
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 345666553 446688889999999999 999999987653
No 103
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=29.41 E-value=82 Score=25.23 Aligned_cols=39 Identities=5% Similarity=0.014 Sum_probs=29.4
Q ss_pred CCcEEEeCCCccc--HHHHHHHcCCceEEechhhHHHHHHH
Q 043256 111 DVDCIVFDSFLPW--ALDVAKKFGLTGAAFLTQSCAVAAIY 149 (224)
Q Consensus 111 ~~~~iI~D~~~~~--~~~vA~~lgiP~v~f~t~~a~~~~~~ 149 (224)
++.||+++....- +..+|++.|++.+.+-+.+...+.++
T Consensus 237 ~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~~~Y~~~m 277 (291)
T 1pq4_A 237 NLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLAADWSSNL 277 (291)
T ss_dssp TCCEEEEETTSCCHHHHHHHHHHTCEEEEECTTCSSHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCchhhHHHHH
Confidence 7899999987754 45799999999988877665444443
No 104
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=29.06 E-value=2.3e+02 Score=22.95 Aligned_cols=103 Identities=12% Similarity=0.071 Sum_probs=64.5
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhC--CCEEEEEeccccccccccCCCCCCCeE-EEEecCCCCCCCCCCcCCHHHH
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERK--GIKVTIVTTYFISKSLHRDPSSSISIA-LETISDGYDKGGSAQAESDQAY 90 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~--G~~VT~~~t~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~~~~~~~~~~~~ 90 (224)
..+|+++-.-+.|-+.-...+.+.|.++ +.+|++++.+.+.+-+.. .+. |+ ++.++. .+ ....
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~--~p~--vd~vi~~~~----~~------~~~~ 73 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY--NPN--IDELIVVDK----KG------RHNS 73 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS--CTT--CSEEEEECC----SS------HHHH
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc--CCC--ccEEEEeCc----cc------cccc
Confidence 3589999999999999999999999986 899999999887766553 232 53 444431 11 0000
Q ss_pred HHHHHHHhHHHHHHHHHhcCCC-cEEEeCCCcc-cHHHHHHHcCCceEE
Q 043256 91 VDRFWQIGLQTLTELVERMNDV-DCIVFDSFLP-WALDVAKKFGLTGAA 137 (224)
Q Consensus 91 ~~~~~~~~~~~l~~ll~~~~~~-~~iI~D~~~~-~~~~vA~~lgiP~v~ 137 (224)
+..+. .+..-+++. ++ |++|. +-.. ....++.-.|+|..+
T Consensus 74 ~~~~~-----~l~~~Lr~~-~y~D~vid-l~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 74 ISGLN-----EVAREINAK-GKTDIVIN-LHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HHHHH-----HHHHHHHHH-CCCCEEEE-CCCSHHHHHHHHHHCCSEEE
T ss_pred HHHHH-----HHHHHHhhC-CCCeEEEE-CCCChHHHHHHHHhCCCeEE
Confidence 11111 111223333 78 97774 4333 345688888998544
No 105
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=28.83 E-value=80 Score=21.43 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=21.1
Q ss_pred CCcEEEeCCCccc--HHHHHHHc---------CCceEEechh
Q 043256 111 DVDCIVFDSFLPW--ALDVAKKF---------GLTGAAFLTQ 141 (224)
Q Consensus 111 ~~~~iI~D~~~~~--~~~vA~~l---------giP~v~f~t~ 141 (224)
++|+||.|..++. +.++.+++ .+|.+++...
T Consensus 58 ~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 58 DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 7999999987753 45555543 2777776553
No 106
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=27.43 E-value=42 Score=24.75 Aligned_cols=32 Identities=16% Similarity=0.233 Sum_probs=21.9
Q ss_pred eEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 16 NCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 16 hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
+|+++- +.|.+= ..|+++|+++|++|+.+.-.
T Consensus 2 kvlVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIG--ATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred eEEEEc--CCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 344443 344442 47899999999999988754
No 107
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=27.33 E-value=51 Score=25.40 Aligned_cols=30 Identities=7% Similarity=0.161 Sum_probs=23.4
Q ss_pred CCcEEEeCCCcccHHHHHHHcCCceEEech
Q 043256 111 DVDCIVFDSFLPWALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 111 ~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t 140 (224)
.+.+||+|---.-+...|+++|||++.+..
T Consensus 33 eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~ 62 (215)
T 3tqr_A 33 EIRAVISNRADAYGLKRAQQADIPTHIIPH 62 (215)
T ss_dssp EEEEEEESCTTCHHHHHHHHTTCCEEECCG
T ss_pred EEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 577899986444456899999999998754
No 108
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=27.18 E-value=82 Score=22.31 Aligned_cols=31 Identities=13% Similarity=0.270 Sum_probs=25.7
Q ss_pred CccchHHHHHHHHHHHhCCCEEEEEeccccc
Q 043256 24 AQGHINPLLLFSKRLERKGIKVTIVTTYFIS 54 (224)
Q Consensus 24 ~~GH~~P~l~La~~La~~G~~VT~~~t~~~~ 54 (224)
..-...+.+.+|...++.|++|+++.|..-.
T Consensus 18 ~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv 48 (144)
T 2qs7_A 18 TIDKLMPVGILTSGAAASGYEVNLFFTFWGL 48 (144)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEECHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCcEEEEEehHHH
Confidence 3567788999999999999999998887544
No 109
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=26.96 E-value=59 Score=28.27 Aligned_cols=33 Identities=12% Similarity=0.025 Sum_probs=24.0
Q ss_pred HHHHHhcCCCcEEEeCCCcccHHHHHHHcCCceEEec
Q 043256 103 TELVERMNDVDCIVFDSFLPWALDVAKKFGLTGAAFL 139 (224)
Q Consensus 103 ~~ll~~~~~~~~iI~D~~~~~~~~vA~~lgiP~v~f~ 139 (224)
++++++. +||++|... ....+|+++|||.+.+.
T Consensus 394 ~~~i~~~-~pDL~ig~~---~~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 394 LKTVDEY-QADILIAGG---RNMYTALKGRVPFLDIN 426 (483)
T ss_dssp HHHHHHT-TCSEEECCG---GGHHHHHHTTCCBCCCC
T ss_pred HHHHHhc-CCCEEEECC---chhHHHHHcCCCEEEec
Confidence 3444444 799999753 56789999999998543
No 110
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=26.54 E-value=75 Score=24.24 Aligned_cols=30 Identities=17% Similarity=0.241 Sum_probs=24.0
Q ss_pred CCcEEEeCCCcccHHHHHHHcCCceEEech
Q 043256 111 DVDCIVFDSFLPWALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 111 ~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t 140 (224)
.+.+||++.--..+...|+++|||++.+.+
T Consensus 29 ~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~ 58 (209)
T 1meo_A 29 QIDIVISNKAAVAGLDKAERAGIPTRVINH 58 (209)
T ss_dssp EEEEEEESSTTCHHHHHHHHTTCCEEECCG
T ss_pred EEEEEEeCCCChHHHHHHHHcCCCEEEECc
Confidence 467899987555667889999999998765
No 111
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=26.54 E-value=52 Score=25.60 Aligned_cols=20 Identities=25% Similarity=0.403 Sum_probs=16.8
Q ss_pred HHHHHHHHhCCCEEEEEecc
Q 043256 32 LLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 32 l~La~~La~~G~~VT~~~t~ 51 (224)
..+|+.|+.+|++|+++..+
T Consensus 38 ~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 38 FAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 46789999999999998654
No 112
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=26.54 E-value=44 Score=25.20 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=23.0
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
.+|++.- +.|.+= ..++++|+++|++|+.+.-.
T Consensus 22 ~~ilVtG--atG~iG--~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 22 MRVLVVG--ANGKVA--RYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEC--CCChHH--HHHHHHHHhCCCeEEEEECC
Confidence 3566654 444432 46789999999999988754
No 113
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=26.31 E-value=1.2e+02 Score=19.61 Aligned_cols=36 Identities=25% Similarity=0.492 Sum_probs=23.3
Q ss_pred HHhcCCCcEEEeCCCccc--HHHHHH----HcCCceEEechhh
Q 043256 106 VERMNDVDCIVFDSFLPW--ALDVAK----KFGLTGAAFLTQS 142 (224)
Q Consensus 106 l~~~~~~~~iI~D~~~~~--~~~vA~----~lgiP~v~f~t~~ 142 (224)
+++. +||+||.|..++. +.++.+ ..++|.+++....
T Consensus 42 ~~~~-~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 42 VEEL-QPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp HHTT-CCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred HhhC-CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 3444 7999999997753 334444 3478877766544
No 114
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=26.04 E-value=63 Score=27.67 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=24.5
Q ss_pred EEeCCC---ccchHHHHHHHHHHHhCCCEEEEEeccc
Q 043256 19 VLSYPA---QGHINPLLLFSKRLERKGIKVTIVTTYF 52 (224)
Q Consensus 19 ~~p~p~---~GH~~P~l~La~~La~~G~~VT~~~t~~ 52 (224)
+=|..- -||+.|++.+ ++|...||++.++..+.
T Consensus 37 ~dPTg~sLHlGh~v~l~~l-~~lQ~~G~~~i~lIgd~ 72 (419)
T 2ts1_A 37 FDPTADSLHIGHLATILTM-RRFQQAGHRPIALVGGA 72 (419)
T ss_dssp ECCSSSSCBGGGHHHHHHH-HHHHHTTCEEEEEECTT
T ss_pred eCCCCCCccHHHHHHHHHH-HHHHHCCCcEEEEEcCc
Confidence 445543 3999987665 58888999999987653
No 115
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=25.93 E-value=1e+02 Score=21.75 Aligned_cols=38 Identities=16% Similarity=0.218 Sum_probs=23.1
Q ss_pred CceEEEEeCCCccchHHHH-HHHHHHHhCCCEEEEEecc
Q 043256 14 LANCLVLSYPAQGHINPLL-LFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l-~La~~La~~G~~VT~~~t~ 51 (224)
++.|++++-.+.+.-.... .+++.|+++|+.|..+.-+
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 42 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP 42 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS
T ss_pred CCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC
Confidence 4568888755443321223 3446788899988776544
No 116
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=25.76 E-value=70 Score=25.53 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=37.0
Q ss_pred eEEEEeCCCccchHHHHHHHHHHHhC--CCEEEEEeccccccccc
Q 043256 16 NCLVLSYPAQGHINPLLLFSKRLERK--GIKVTIVTTYFISKSLH 58 (224)
Q Consensus 16 hvl~~p~p~~GH~~P~l~La~~La~~--G~~VT~~~t~~~~~~~~ 58 (224)
+|+++-.-+.|-+.=...+.+.|.++ +.+||+++.+.+.+.+.
T Consensus 2 ~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~ 46 (326)
T 2gt1_A 2 RVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPS 46 (326)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHH
T ss_pred eEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHh
Confidence 78999988999999999999999886 89999999987665544
No 117
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=25.66 E-value=72 Score=25.21 Aligned_cols=33 Identities=18% Similarity=0.088 Sum_probs=23.4
Q ss_pred eEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccc
Q 043256 16 NCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYF 52 (224)
Q Consensus 16 hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~ 52 (224)
+|+++- +.|.+ =..++++|+++|++|+.++-..
T Consensus 13 ~ilVtG--atG~i--G~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIFG--GTGYI--GNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEET--TTSTT--HHHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEEC--CCchH--HHHHHHHHHHCCCcEEEEECCC
Confidence 577665 44544 2467899999999999887543
No 118
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=25.57 E-value=89 Score=23.90 Aligned_cols=38 Identities=16% Similarity=0.101 Sum_probs=23.4
Q ss_pred ceEEEEeCCCccch--HHHHHHHHHHHhCCCEEEEEeccc
Q 043256 15 ANCLVLSYPAQGHI--NPLLLFSKRLERKGIKVTIVTTYF 52 (224)
Q Consensus 15 ~hvl~~p~p~~GH~--~P~l~La~~La~~G~~VT~~~t~~ 52 (224)
.-+|++...+.||- .-+..+|+.|+++|+.|-.+....
T Consensus 56 ~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG 95 (259)
T 4ao6_A 56 DRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPG 95 (259)
T ss_dssp SEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC
T ss_pred CCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCC
Confidence 34666666666663 347889999999999887665543
No 119
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=25.56 E-value=91 Score=26.86 Aligned_cols=40 Identities=15% Similarity=0.290 Sum_probs=34.1
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccccc
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFIS 54 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~~ 54 (224)
.-|+++-.+|.|=..-...||..|+.+|.+|.++..+...
T Consensus 101 ~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 101 TILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred eEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 3456788889999999999999999999999999877543
No 120
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=25.51 E-value=48 Score=24.59 Aligned_cols=20 Identities=20% Similarity=0.179 Sum_probs=16.9
Q ss_pred HHHHHHHHhCCCEEEEEecc
Q 043256 32 LLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 32 l~La~~La~~G~~VT~~~t~ 51 (224)
..|+++|+++|++|+.+.-.
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 14 SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEEec
Confidence 57899999999999988754
No 121
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A
Probab=25.47 E-value=51 Score=27.97 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=25.0
Q ss_pred EEeCCC---ccchHHHHHHHHHHHhCCCEEEEEecccc
Q 043256 19 VLSYPA---QGHINPLLLFSKRLERKGIKVTIVTTYFI 53 (224)
Q Consensus 19 ~~p~p~---~GH~~P~l~La~~La~~G~~VT~~~t~~~ 53 (224)
+=|..- -||+.|++.+. .|...||++.++..+..
T Consensus 71 ~dPTg~sLHlGhlv~l~~l~-~lQ~~G~~~~~lIgD~h 107 (392)
T 1y42_X 71 IDPTAPSLHVGHLLPLMPLF-WMYLEGYKAFTLIGGST 107 (392)
T ss_dssp ECCCSSSCBGGGHHHHHHHH-HHHHHTCEEEEEECTTT
T ss_pred ecCCCCCccHHHHHHHHHHH-HHHHcCCcEEEEEcCce
Confidence 455543 39999877765 77788999999887744
No 122
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=25.36 E-value=86 Score=24.10 Aligned_cols=28 Identities=14% Similarity=-0.002 Sum_probs=22.1
Q ss_pred CCcEEEeCCCcccHHHHHHHcCCceEEec
Q 043256 111 DVDCIVFDSFLPWALDVAKKFGLTGAAFL 139 (224)
Q Consensus 111 ~~~~iI~D~~~~~~~~vA~~lgiP~v~f~ 139 (224)
.+.+||++-- .-+...|+++|||++.+.
T Consensus 40 eI~~Vis~~~-a~~~~~A~~~gIp~~~~~ 67 (215)
T 3da8_A 40 RVVAVGVDRE-CRAAEIAAEASVPVFTVR 67 (215)
T ss_dssp EEEEEEESSC-CHHHHHHHHTTCCEEECC
T ss_pred eEEEEEeCCc-hHHHHHHHHcCCCEEEeC
Confidence 4678999874 335678999999999884
No 123
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=25.36 E-value=91 Score=21.53 Aligned_cols=37 Identities=14% Similarity=0.092 Sum_probs=23.8
Q ss_pred CCceEEEEeCCCccch-HHHHHHHHHHHhCCCEEEEEe
Q 043256 13 KLANCLVLSYPAQGHI-NPLLLFSKRLERKGIKVTIVT 49 (224)
Q Consensus 13 ~~~hvl~~p~p~~GH~-~P~l~La~~La~~G~~VT~~~ 49 (224)
+++.|+++.-.+.+.. .-+..+++.|+++|+.|..+.
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d 40 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPD 40 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCC
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeC
Confidence 4556777764443322 145689999999998765443
No 124
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=25.33 E-value=75 Score=27.28 Aligned_cols=32 Identities=9% Similarity=0.011 Sum_probs=18.4
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEE
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIV 48 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~ 48 (224)
..|-+++ +.-..--+-+|-+.|..-|.+|..+
T Consensus 170 ~~VNilg--~~~~~~d~~eik~lL~~~Gi~v~~l 201 (458)
T 1mio_B 170 GKINVIP--GFVGPADMREIKRLFEAMDIPYIMF 201 (458)
T ss_dssp SCEEEEC--CSCCHHHHHHHHHHHHHHTCCEEES
T ss_pred CcEEEEC--CCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 4555665 2211233467777777778887763
No 125
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima}
Probab=25.02 E-value=46 Score=27.61 Aligned_cols=26 Identities=19% Similarity=0.175 Sum_probs=23.2
Q ss_pred cchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 26 GHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 26 GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
||..|.+.-.+.|.+.||++.++..+
T Consensus 28 Gn~~g~l~~~~~lQ~~G~~~~~~IaD 53 (340)
T 2g36_A 28 GHLVGALENWVKLQEEGNECFYFVAD 53 (340)
T ss_dssp HHHHTHHHHHHHHHHTTCEEEEEECH
T ss_pred HhHHHHHHHHHHHHHCCCCEEEEEec
Confidence 99999888888899999999998876
No 126
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=24.80 E-value=28 Score=30.13 Aligned_cols=35 Identities=17% Similarity=0.168 Sum_probs=26.0
Q ss_pred CCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccc
Q 043256 13 KLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYF 52 (224)
Q Consensus 13 ~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~ 52 (224)
+.+||+++-..-.|. .||+.|.++||+||++-...
T Consensus 2 ~~M~iiI~G~G~vG~-----~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVGG-----TLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHHH-----HHHHHHHHCCCCEEEEECCH
Confidence 346888776544453 58999999999999987653
No 127
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=24.74 E-value=72 Score=27.81 Aligned_cols=30 Identities=20% Similarity=0.160 Sum_probs=22.2
Q ss_pred HHHhcCCCcEEEeCCCcccHHHHHHHcCCceEEe
Q 043256 105 LVERMNDVDCIVFDSFLPWALDVAKKFGLTGAAF 138 (224)
Q Consensus 105 ll~~~~~~~~iI~D~~~~~~~~vA~~lgiP~v~f 138 (224)
++++. +||++|... ....+|+++|||.+-+
T Consensus 412 ~i~~~-~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 412 FVKRI-KPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHH-CCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHhc-CCcEEEeCc---chhHHHHHcCCCEEec
Confidence 33344 789988853 4578999999999863
No 128
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=24.49 E-value=1.4e+02 Score=21.69 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=25.6
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEec
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTT 50 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t 50 (224)
+-|+++. ...|+-.-+..+++.|+++|+.|..+..
T Consensus 33 p~vv~~H-G~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 33 PIVIVVQ-EIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEC-CTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CEEEEEc-CcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 3444444 4557777889999999999998776654
No 129
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=24.43 E-value=47 Score=22.86 Aligned_cols=32 Identities=19% Similarity=0.147 Sum_probs=24.5
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
.||+++-+ |.+ -..+++.|.++|++|+++...
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 47888864 553 357899999999999988754
No 130
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=24.38 E-value=1e+02 Score=24.17 Aligned_cols=39 Identities=18% Similarity=0.171 Sum_probs=25.8
Q ss_pred HHHHHHHHhcC-CCcEEEeCCCcc-------cHHHHHHHcCCceEEe
Q 043256 100 QTLTELVERMN-DVDCIVFDSFLP-------WALDVAKKFGLTGAAF 138 (224)
Q Consensus 100 ~~l~~ll~~~~-~~~~iI~D~~~~-------~~~~vA~~lgiP~v~f 138 (224)
+.+.++++++. +||+|++|.... =|.-+.-.+|+|++..
T Consensus 95 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 95 PTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp HHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 34455666665 799999998532 2334555677888874
No 131
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=24.27 E-value=1.3e+02 Score=19.77 Aligned_cols=32 Identities=16% Similarity=0.108 Sum_probs=21.3
Q ss_pred CCcEEEeCCCcc---cHHHHHHH----cCCceEEechhh
Q 043256 111 DVDCIVFDSFLP---WALDVAKK----FGLTGAAFLTQS 142 (224)
Q Consensus 111 ~~~~iI~D~~~~---~~~~vA~~----lgiP~v~f~t~~ 142 (224)
++|+||.|.... .+.++.++ .++|.+++....
T Consensus 54 ~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 54 RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 799999997663 23444443 478888776544
No 132
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=24.16 E-value=57 Score=26.76 Aligned_cols=24 Identities=17% Similarity=0.278 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHhCCCEEEEEecc
Q 043256 28 INPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 28 ~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
.-+|.+|.+.|.++|++|.++|..
T Consensus 145 ~~~~~~l~~~l~~~G~~v~ivSas 168 (327)
T 4as2_A 145 FSGQRELYNKLMENGIEVYVISAA 168 (327)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999998865
No 133
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=23.77 E-value=55 Score=23.72 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=22.4
Q ss_pred eEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 16 NCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 16 hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
+|+++- +.|-+ =..++++|+++|++|+.+.-.
T Consensus 5 ~ilVtG--atG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 5 KIAIFG--ATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp EEEEES--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEc--CCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 566654 44433 257789999999999988754
No 134
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=23.73 E-value=61 Score=27.75 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=25.0
Q ss_pred EEeCCC---ccchHHHHHHHHHHHhCCCEEEEEecccc
Q 043256 19 VLSYPA---QGHINPLLLFSKRLERKGIKVTIVTTYFI 53 (224)
Q Consensus 19 ~~p~p~---~GH~~P~l~La~~La~~G~~VT~~~t~~~ 53 (224)
+=|..- -||+.|++.+ ++|...||++.++..+..
T Consensus 39 ~dPTg~sLHlGh~v~l~~~-~~lQ~~G~~~~~lIgd~t 75 (420)
T 1jil_A 39 ADPTADSLHIGHLLPFLTL-RRFQEHGHRPIVLIGGGT 75 (420)
T ss_dssp ECCSSSSCBHHHHHHHHHH-HHHHHTTCEEEEEECTTG
T ss_pred eCCCCCCccHHHHHHHHHH-HHHHHCCCcEEEEEcCce
Confidence 555543 2999987665 588889999999887643
No 135
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=23.52 E-value=1.4e+02 Score=21.33 Aligned_cols=36 Identities=17% Similarity=0.161 Sum_probs=23.0
Q ss_pred CceEEEEeC----CCccchHHHHHHHHHHHhCCCEEEEEe
Q 043256 14 LANCLVLSY----PAQGHINPLLLFSKRLERKGIKVTIVT 49 (224)
Q Consensus 14 ~~hvl~~p~----p~~GH~~P~l~La~~La~~G~~VT~~~ 49 (224)
++-|+++.- .+.+.-.-+..+++.|+++|+.|..+.
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d 76 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFN 76 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEEC
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEe
Confidence 445556652 132333446889999999999876554
No 136
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=23.39 E-value=92 Score=26.25 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=21.1
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
++++++| |-||+- ..|++.+..-|++||++=..
T Consensus 204 ~~rL~If---GAGhva--~ala~~a~~lg~~V~v~D~R 236 (386)
T 2we8_A 204 RPRMLVF---GAIDFA--AAVAQQGAFLGYRVTVCDAR 236 (386)
T ss_dssp CCEEEEE---CCSTHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE---CCCHHH--HHHHHHHHhCCCEEEEECCc
Confidence 4556555 678884 23344444559999998654
No 137
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=23.19 E-value=1.3e+02 Score=19.79 Aligned_cols=30 Identities=7% Similarity=-0.033 Sum_probs=23.4
Q ss_pred cchHHHHHHHHHHHhC-CC-EEEEEecccccc
Q 043256 26 GHINPLLLFSKRLERK-GI-KVTIVTTYFISK 55 (224)
Q Consensus 26 GH~~P~l~La~~La~~-G~-~VT~~~t~~~~~ 55 (224)
......+.+|..+++. |+ +|+++-...-..
T Consensus 16 ~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~ 47 (117)
T 1jx7_A 16 ESLFNSLRLAIALREQESNLDLRLFLMSDAVT 47 (117)
T ss_dssp SHHHHHHHHHHHHHHHCTTCEEEEEECGGGGG
T ss_pred HHHHHHHHHHHHHHhcCCCccEEEEEEchHHH
Confidence 4456689999999998 99 999887765443
No 138
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=22.96 E-value=45 Score=26.97 Aligned_cols=18 Identities=11% Similarity=0.233 Sum_probs=15.6
Q ss_pred HHHHHHHHhCCCEEEEEe
Q 043256 32 LLFSKRLERKGIKVTIVT 49 (224)
Q Consensus 32 l~La~~La~~G~~VT~~~ 49 (224)
+-+|..|+++|++|+++=
T Consensus 17 l~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 17 STAARYAAKYGLKTLMIE 34 (397)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCcEEEEe
Confidence 567899999999999983
No 139
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=22.93 E-value=98 Score=25.90 Aligned_cols=34 Identities=15% Similarity=0.232 Sum_probs=23.4
Q ss_pred CceEEEEeCCCccchH-HHHHHHHHHHhCCCEEEEEecccc
Q 043256 14 LANCLVLSYPAQGHIN-PLLLFSKRLERKGIKVTIVTTYFI 53 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~-P~l~La~~La~~G~~VT~~~t~~~ 53 (224)
+++++++ |.||+. ++.++++.| |++||++-+...
T Consensus 199 ~~~L~I~---GaGhva~aLa~la~~l---gf~V~v~D~R~~ 233 (362)
T 3on5_A 199 KERLIIF---GAGPDVPPLVTFASNV---GFYTVVTDWRPN 233 (362)
T ss_dssp CEEEEEE---CCSTTHHHHHHHHHHH---TEEEEEEESCGG
T ss_pred CCEEEEE---CCCHHHHHHHHHHHHC---CCeEEEECCCcc
Confidence 4455554 789984 566666655 999999876543
No 140
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=22.50 E-value=60 Score=25.72 Aligned_cols=35 Identities=11% Similarity=0.151 Sum_probs=26.1
Q ss_pred ceEEEEeCCCccchH-HHHHHHHHHHhCCCEEEEEecc
Q 043256 15 ANCLVLSYPAQGHIN-PLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~-P~l~La~~La~~G~~VT~~~t~ 51 (224)
.+|+++.-+ |+-= =-+-.||.|+.+|++|+++...
T Consensus 86 ~~vlVlcG~--GNNGGDGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGP--HVKGAQGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECS--SHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECC--CCCHHHHHHHHHHHHHCCCeEEEEEec
Confidence 489998854 4331 2477899999999999998654
No 141
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=22.38 E-value=95 Score=24.83 Aligned_cols=33 Identities=24% Similarity=0.289 Sum_probs=23.9
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
..+|.++- .|.+- ..+|+.|+++||+|+++...
T Consensus 21 m~~I~iIG---~G~mG--~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLG---LGIMG--KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEEC---CSHHH--HHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEC---ccHHH--HHHHHHHHHCCCeEEEEeCC
Confidence 45788774 44442 45689999999999988654
No 142
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=22.24 E-value=86 Score=20.49 Aligned_cols=39 Identities=15% Similarity=0.261 Sum_probs=26.4
Q ss_pred HHHHHHHHHhcC---------CCcEEEeCCCcccHHHHHHHcCCceEE
Q 043256 99 LQTLTELVERMN---------DVDCIVFDSFLPWALDVAKKFGLTGAA 137 (224)
Q Consensus 99 ~~~l~~ll~~~~---------~~~~iI~D~~~~~~~~vA~~lgiP~v~ 137 (224)
+..++++++++. +.|++|+.--.+-=..=|+++|||.+.
T Consensus 23 R~e~~~~i~~~Gg~v~~sVskkt~~LV~g~~~gsK~~kA~~lgI~Ii~ 70 (92)
T 1l7b_A 23 REEVKALLRRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVPTLT 70 (92)
T ss_dssp HHHHHHHHHHTTCEEESCCSSSCCCBEECSSSSTTHHHHHCSSSCCEE
T ss_pred HHHHHHHHHHcCCEEeCcccCCeeEEEeCCCCChHHHHHHHcCCcEEe
Confidence 345566666542 578888875444335789999999885
No 143
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=22.19 E-value=58 Score=26.35 Aligned_cols=38 Identities=26% Similarity=0.218 Sum_probs=26.8
Q ss_pred HHHHHHHHhc-----C-CCcEEEeCCCcccHHHHHHHcCCceEEec
Q 043256 100 QTLTELVERM-----N-DVDCIVFDSFLPWALDVAKKFGLTGAAFL 139 (224)
Q Consensus 100 ~~l~~ll~~~-----~-~~~~iI~D~~~~~~~~vA~~lgiP~v~f~ 139 (224)
..+++++.+. . .+.+||++-- -+..+|+++|||++.+-
T Consensus 107 ~~l~~ll~~~~~g~l~~~i~~Visn~~--~~~~~A~~~gIp~~~~~ 150 (292)
T 3lou_A 107 HCLADLLFRWKMGELKMDIVGIVSNHP--DFAPLAAQHGLPFRHFP 150 (292)
T ss_dssp HHHHHHHHHHHHTSSCCEEEEEEESSS--TTHHHHHHTTCCEEECC
T ss_pred cCHHHHHHHHHcCCCCcEEEEEEeCcH--HHHHHHHHcCCCEEEeC
Confidence 4566666542 1 4678999863 34567999999999864
No 144
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=22.04 E-value=51 Score=25.90 Aligned_cols=35 Identities=14% Similarity=0.204 Sum_probs=25.9
Q ss_pred ceEEEEeCCCccchH-HHHHHHHHHHhCCCEEEEEecc
Q 043256 15 ANCLVLSYPAQGHIN-PLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~-P~l~La~~La~~G~~VT~~~t~ 51 (224)
.+|+++.-+| +-= =-+-.||+|+++|++|+++...
T Consensus 59 ~~v~VlcG~G--NNGGDGlv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 59 KHVFVIAGPG--NNGGDGLVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp CEEEEEECSS--HHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEEECCC--CCHHHHHHHHHHHHHCCCeEEEEEcC
Confidence 4899988554 321 2377899999999999997543
No 145
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=21.89 E-value=1e+02 Score=24.44 Aligned_cols=32 Identities=25% Similarity=0.344 Sum_probs=21.8
Q ss_pred ceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEec
Q 043256 15 ANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTT 50 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t 50 (224)
.+|++.- +.|-+= .+|+++|+++|++|+.+.-
T Consensus 10 ~~vlVTG--atGfIG--~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 10 KTACVVG--GTGFVA--SLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CEEEEEC--TTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC--CchHHH--HHHHHHHHHCCCEEEEEEc
Confidence 3566655 444443 3678999999999987553
No 146
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=21.84 E-value=1.5e+02 Score=22.63 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=22.5
Q ss_pred ceEEEEeCCCccc----hHHHHHHHHHHHhCCCEEEE
Q 043256 15 ANCLVLSYPAQGH----INPLLLFSKRLERKGIKVTI 47 (224)
Q Consensus 15 ~hvl~~p~p~~GH----~~P~l~La~~La~~G~~VT~ 47 (224)
..|.++.-...+- ..-..+|++.|+++|+.|..
T Consensus 14 ~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVs 50 (215)
T 2a33_A 14 RRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVY 50 (215)
T ss_dssp SEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEE
Confidence 4688885555432 34567888889999987653
No 147
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=21.63 E-value=1e+02 Score=24.68 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=23.3
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEec
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTT 50 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t 50 (224)
..+|++.- +.|-+- ..|+++|+++|++|+.+.-
T Consensus 27 ~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITG--GAGFVG--SHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEEc--CccHHH--HHHHHHHHHCCCEEEEEeC
Confidence 34677665 445442 5678999999999998764
No 148
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=21.35 E-value=71 Score=24.43 Aligned_cols=30 Identities=13% Similarity=0.307 Sum_probs=23.3
Q ss_pred CCcEEEeCCCcccHHHHHHHcCCceEEech
Q 043256 111 DVDCIVFDSFLPWALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 111 ~~~~iI~D~~~~~~~~vA~~lgiP~v~f~t 140 (224)
.+.+||++---..+...|+++|||++.+..
T Consensus 29 ~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~ 58 (212)
T 1jkx_A 29 TVRAVFSNKADAFGLERARQAGIATHTLIA 58 (212)
T ss_dssp EEEEEEESCTTCHHHHHHHHTTCEEEECCG
T ss_pred eEEEEEeCCCchHHHHHHHHcCCcEEEeCc
Confidence 367899986444567899999999998754
No 149
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=21.29 E-value=1.8e+02 Score=19.20 Aligned_cols=35 Identities=6% Similarity=0.171 Sum_probs=21.8
Q ss_pred HHhcCCCcEEEeCCCccc--HHHHHHHc-------CCceEEechh
Q 043256 106 VERMNDVDCIVFDSFLPW--ALDVAKKF-------GLTGAAFLTQ 141 (224)
Q Consensus 106 l~~~~~~~~iI~D~~~~~--~~~vA~~l-------giP~v~f~t~ 141 (224)
++.. ++|+||.|..++. +.++.+++ ++|.+++...
T Consensus 43 l~~~-~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 43 LNAT-PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHS-CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred Hhcc-CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 3444 6899999987652 44444433 5777766543
No 150
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=21.22 E-value=1.6e+02 Score=19.26 Aligned_cols=37 Identities=11% Similarity=0.054 Sum_probs=22.6
Q ss_pred HHhcCCCcEEEeCCCcc-------cHHHHHHH-----cCCceEEechhhH
Q 043256 106 VERMNDVDCIVFDSFLP-------WALDVAKK-----FGLTGAAFLTQSC 143 (224)
Q Consensus 106 l~~~~~~~~iI~D~~~~-------~~~~vA~~-----lgiP~v~f~t~~a 143 (224)
++.. ++|+||.|.-.. .+.++.++ -++|.+++.....
T Consensus 43 l~~~-~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 91 (140)
T 2qr3_A 43 LREE-NPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYAD 91 (140)
T ss_dssp HHHS-CEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGG
T ss_pred HHcC-CCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 3444 689999998654 23333333 2688887765443
No 151
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=21.21 E-value=87 Score=23.49 Aligned_cols=37 Identities=14% Similarity=-0.086 Sum_probs=30.1
Q ss_pred eEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEeccc
Q 043256 16 NCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYF 52 (224)
Q Consensus 16 hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~ 52 (224)
+|++-.-.|.|=-.-...||..|+++|.+|-++-.+.
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4666566677888889999999999999999887654
No 152
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=21.13 E-value=74 Score=25.31 Aligned_cols=33 Identities=12% Similarity=0.005 Sum_probs=24.6
Q ss_pred CceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecc
Q 043256 14 LANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 14 ~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
+.+|.++-....|. .+|+.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 35788886555553 5689999999999988654
No 153
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=21.07 E-value=1.3e+02 Score=23.84 Aligned_cols=39 Identities=21% Similarity=0.220 Sum_probs=28.9
Q ss_pred HHHHHHHhcCCCcEEEeCCCc------ccHHHHHHHcCCceEEech
Q 043256 101 TLTELVERMNDVDCIVFDSFL------PWALDVAKKFGLTGAAFLT 140 (224)
Q Consensus 101 ~l~~ll~~~~~~~~iI~D~~~------~~~~~vA~~lgiP~v~f~t 140 (224)
.+.+++++. ++|+|++-.-. ..+..+|..||+|.+.+.+
T Consensus 103 ~La~~i~~~-~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 103 ILTEVIKKE-APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHH-CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHhc-CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 345556666 68999986543 1467899999999998875
No 154
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=20.98 E-value=59 Score=24.15 Aligned_cols=20 Identities=10% Similarity=-0.012 Sum_probs=16.9
Q ss_pred HHHHHHHHhCCCEEEEEecc
Q 043256 32 LLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 32 l~La~~La~~G~~VT~~~t~ 51 (224)
..++++|+++|++|+.+.-.
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 14 KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp HHHHHHHTTSSCEEEEEESS
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 57899999999999988754
No 155
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=20.75 E-value=1.5e+02 Score=21.95 Aligned_cols=35 Identities=14% Similarity=0.344 Sum_probs=25.6
Q ss_pred eE-EEEeCCCccchHHHHHHHHHHHhCCCEEEEEec
Q 043256 16 NC-LVLSYPAQGHINPLLLFSKRLERKGIKVTIVTT 50 (224)
Q Consensus 16 hv-l~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t 50 (224)
+| +++--+...+-.....+++++.++|++|.++..
T Consensus 108 riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~ 143 (192)
T 2x5n_A 108 RIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHI 143 (192)
T ss_dssp EEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred eEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEe
Confidence 44 455555545667788899999999999888764
No 156
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=20.73 E-value=65 Score=25.95 Aligned_cols=38 Identities=21% Similarity=0.129 Sum_probs=26.8
Q ss_pred HHHHHHHHhcC------CCcEEEeCCCcccHHHHHHHcCCceEEec
Q 043256 100 QTLTELVERMN------DVDCIVFDSFLPWALDVAKKFGLTGAAFL 139 (224)
Q Consensus 100 ~~l~~ll~~~~------~~~~iI~D~~~~~~~~vA~~lgiP~v~f~ 139 (224)
..+++++.+.. .+.+||+|-- -+..+|+++|||++.+-
T Consensus 102 ~~l~~ll~~~~~g~l~~~i~~Visn~~--~~~~~A~~~gIp~~~~~ 145 (286)
T 3n0v_A 102 HCLNDLLYRQRIGQLGMDVVAVVSNHP--DLEPLAHWHKIPYYHFA 145 (286)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEEEESSS--TTHHHHHHTTCCEEECC
T ss_pred CCHHHHHHHHHCCCCCcEEEEEEeCcH--HHHHHHHHcCCCEEEeC
Confidence 46666665421 4678999853 35578999999999864
No 157
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=20.71 E-value=67 Score=26.16 Aligned_cols=35 Identities=11% Similarity=0.157 Sum_probs=26.1
Q ss_pred ceEEEEeCCCccchH-HHHHHHHHHHhCCCEEEEEecc
Q 043256 15 ANCLVLSYPAQGHIN-PLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~-P~l~La~~La~~G~~VT~~~t~ 51 (224)
.+|+++.-|| +-= =-+-+||.|+.+|++|+++...
T Consensus 133 ~~vlVlcG~G--NNGGDGlv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPH--VKGAQGISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSS--HHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCC--CCHHHHHHHHHHHHHCCCcEEEEEec
Confidence 4899988544 331 2377899999999999998654
No 158
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=20.68 E-value=72 Score=24.06 Aligned_cols=19 Identities=21% Similarity=0.225 Sum_probs=15.8
Q ss_pred HHHHHHHHhCCCEEEEEec
Q 043256 32 LLFSKRLERKGIKVTIVTT 50 (224)
Q Consensus 32 l~La~~La~~G~~VT~~~t 50 (224)
.+++++|+++|++|+++.-
T Consensus 15 ~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 15 AALKELLARAGHTVIGIDR 33 (255)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHhCCCEEEEEeC
Confidence 4678999999999998764
No 159
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=20.51 E-value=1.5e+02 Score=22.94 Aligned_cols=40 Identities=15% Similarity=0.111 Sum_probs=26.2
Q ss_pred HHHHHHHHhcC-CCcEEEeCCCccc-------HHHHHHHcCCceEEec
Q 043256 100 QTLTELVERMN-DVDCIVFDSFLPW-------ALDVAKKFGLTGAAFL 139 (224)
Q Consensus 100 ~~l~~ll~~~~-~~~~iI~D~~~~~-------~~~vA~~lgiP~v~f~ 139 (224)
+.+.++++++. +||+|++|..... |..+.-.+|+|++...
T Consensus 91 P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 91 PLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 34555667765 7999999985432 2345555689988643
No 160
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=20.45 E-value=74 Score=23.86 Aligned_cols=20 Identities=20% Similarity=0.257 Sum_probs=16.6
Q ss_pred HHHHHHHHhCCCEEEEEecc
Q 043256 32 LLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 32 l~La~~La~~G~~VT~~~t~ 51 (224)
..++++|+++|++|+++...
T Consensus 19 ~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 19 EATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 57899999999999887643
No 161
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=20.44 E-value=1.6e+02 Score=19.95 Aligned_cols=33 Identities=9% Similarity=0.057 Sum_probs=21.1
Q ss_pred CCcEEEeCCCccc--HHHHHHHc-----CCceEEechhhH
Q 043256 111 DVDCIVFDSFLPW--ALDVAKKF-----GLTGAAFLTQSC 143 (224)
Q Consensus 111 ~~~~iI~D~~~~~--~~~vA~~l-----giP~v~f~t~~a 143 (224)
++|+||.|..++. +..+.+++ ++|.+++.....
T Consensus 51 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 51 SVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp CCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 7899999987642 33444332 678777665443
No 162
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=20.34 E-value=94 Score=25.20 Aligned_cols=44 Identities=16% Similarity=0.008 Sum_probs=31.2
Q ss_pred HHHHHHHhcCCCcEEEeCCCcccH--HHHHHHcCCceEEechhhHH
Q 043256 101 TLTELVERMNDVDCIVFDSFLPWA--LDVAKKFGLTGAAFLTQSCA 144 (224)
Q Consensus 101 ~l~~ll~~~~~~~~iI~D~~~~~~--~~vA~~lgiP~v~f~t~~a~ 144 (224)
.++.+++...++.-+|.|.|++.+ ..+|.++|.-++.+=....+
T Consensus 241 l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~ 286 (323)
T 1boo_A 241 LPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEY 286 (323)
T ss_dssp HHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHH
T ss_pred HHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHH
Confidence 445566554466779999999764 57888999888876655543
No 163
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=20.34 E-value=1.5e+02 Score=19.12 Aligned_cols=32 Identities=9% Similarity=0.215 Sum_probs=21.0
Q ss_pred CCcEEEeCCCccc--HHHHHHHc-----CCceEEechhh
Q 043256 111 DVDCIVFDSFLPW--ALDVAKKF-----GLTGAAFLTQS 142 (224)
Q Consensus 111 ~~~~iI~D~~~~~--~~~vA~~l-----giP~v~f~t~~ 142 (224)
++|+||.|.-++. +.++.+++ ++|.+++....
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 47 RNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp CSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 7899999987653 34444433 57877765543
No 164
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=20.24 E-value=1.3e+02 Score=24.32 Aligned_cols=24 Identities=17% Similarity=0.348 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHHhCCCEEEEEecc
Q 043256 28 INPLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 28 ~~P~l~La~~La~~G~~VT~~~t~ 51 (224)
+.|+-.|++.+..-..+|+.++++
T Consensus 28 ~~pl~~~v~~I~Gd~v~V~~lv~~ 51 (312)
T 2o1e_A 28 FYPMYEFTKQIVKDKGDVDLLIPS 51 (312)
T ss_dssp SHHHHHHHHHHHGGGEEEEESSCT
T ss_pred cHHHHHHHHHHhCCceEEEEccCC
Confidence 578888888888766788877764
No 165
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=20.20 E-value=69 Score=25.52 Aligned_cols=35 Identities=23% Similarity=0.236 Sum_probs=26.0
Q ss_pred ceEEEEeCCCccchH-HHHHHHHHHHhCCCEEEEEecc
Q 043256 15 ANCLVLSYPAQGHIN-PLLLFSKRLERKGIKVTIVTTY 51 (224)
Q Consensus 15 ~hvl~~p~p~~GH~~-P~l~La~~La~~G~~VT~~~t~ 51 (224)
.+|+++.-||- -= =-+-.||.|+.+|++|+++...
T Consensus 80 ~~VlVlcG~GN--NGGDGlv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGN--NGGDGLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSH--HHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCC--CHHHHHHHHHHHHHCCCcEEEEEeC
Confidence 48999885543 21 2377899999999999998653
No 166
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=20.18 E-value=2e+02 Score=21.75 Aligned_cols=40 Identities=18% Similarity=0.079 Sum_probs=34.5
Q ss_pred CCceEEEEeCCCccchHHHHHHHHHHHhCCCEEEEEecccc
Q 043256 13 KLANCLVLSYPAQGHINPLLLFSKRLERKGIKVTIVTTYFI 53 (224)
Q Consensus 13 ~~~hvl~~p~p~~GH~~P~l~La~~La~~G~~VT~~~t~~~ 53 (224)
+...+++...+|.|=-.-+..|+..|+ +|.+|.++..+..
T Consensus 13 ~~~i~~~~GkgGvGKTTl~~~La~~l~-~g~~v~vvd~D~~ 52 (262)
T 1yrb_A 13 ASMIVVFVGTAGSGKTTLTGEFGRYLE-DNYKVAYVNLDTG 52 (262)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHT-TTSCEEEEECCSS
T ss_pred ceEEEEEeCCCCCCHHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 345677899999999999999999999 9999999987644
Done!