BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043258
MENRSHIVSCECSDLSCDWQVTAIRDVRGKGFVITQFSPKHNCPRLDHAFHPASKWISAM
FLHRWKEQPSISTTEVRNEIESMYGIKCPEWKVFCAANRAKQILGLDYDDGYAMLHQFKE
EMERIDRDNIVLVETETHESREEERFKRVFVCCARTSYAFKVHCRGILAVDGWEINNPCN
SVMLVAAGLDGNNGILPVAFCEVQVEDLDSWVYFLKNINSALRLENGKGLCILGDGDNGV
EYAVEEFLPRAVYRQCCHRIFNEMVRRFPTAPVQHLFWSACRTTSATSQECHDWLKNSNW
ERWALFCMPHWVKCTCVTLTITEKLRTSFDHYLEMSITRRFTAIARSTAEIFERRRMVVW
KWYREKVTPTVQDIIHDRCSDGRRFILNMDAMSCSCGLWQISGIPCAHACRGIKYMRRKI
EDYVDSMMSVQNYMSTYAPGMMQLPQEYAWKWDA

High Scoring Gene Products

Symbol, full name Information P value
AT1G49920 protein from Arabidopsis thaliana 1.3e-16
AT1G64260 protein from Arabidopsis thaliana 1.9e-14
AT1G64255 protein from Arabidopsis thaliana 2.1e-13

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043258
        (454 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2197122 - symbol:AT1G49920 "AT1G49920" species...   178  1.3e-16   2
TAIR|locus:2014230 - symbol:AT1G64260 "AT1G64260" species...   154  1.9e-14   2
TAIR|locus:1006230722 - symbol:AT1G64255 species:3702 "Ar...   159  2.1e-13   2


>TAIR|locus:2197122 [details] [associations]
            symbol:AT1G49920 "AT1G49920" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00575 InterPro:IPR004332 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008270 InterPro:IPR018289
            Pfam:PF10551 Pfam:PF03108 EMBL:AC074110 IPI:IPI00531525
            RefSeq:NP_175414.1 UniGene:At.52103 EnsemblPlants:AT1G49920.1
            GeneID:841415 KEGG:ath:AT1G49920 TAIR:At1g49920 eggNOG:NOG303426
            HOGENOM:HOG000152182 InParanoid:Q9C702 OMA:ISESHTC PhylomeDB:Q9C702
            ProtClustDB:CLSN2682695 Genevestigator:Q9C702 Uniprot:Q9C702
        Length = 785

 Score = 178 (67.7 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
 Identities = 72/322 (22%), Positives = 129/322 (40%)

Query:     2 ENRSHIVSCECSDLSCDWQVTAIRDVRGKGFVITQFSPKHNC-PRLDHAFHPASKWISAM 60
             E    +   EC    C W + A R      F IT+ S  H+C P  +H     ++ I   
Sbjct:   211 ETEKDVYVVECERWHCKWSICASRREEDGLFEITECSGPHDCYP--EHLNDFDAECIPFQ 268

Query:    61 FLHRWKEQPSISTTEVRNEIESMYGIK-------CPEWKVFCAANRA-KQILGLDYDDGY 112
                  + QP++ST E+    E  +G         C E  V  A  +A K+  G D+D  +
Sbjct:   269 IERVVRVQPTLSTAELDKWWEKKFGFALDQVVEHCSEGLVEDAKVKAIKRFFG-DWDQSF 327

Query:   113 AMLHQFKEEMERIDRDNIVLVXXXXXXXXXX---XXFKRVFVCCARTSYAFKVHCRGILA 169
              ++ +    M  +   N +LV               F+ +F   +++   F+ HCR ++ 
Sbjct:   328 RLIPKL---MSVLHSSNGLLVDWQYDSLTHDPEHASFRGLFWAFSQSIQGFQ-HCRPLIV 383

Query:   170 VDGWEINNPCNSVMLVAAGLDGNNGILPVAFCEVQVEDLDSWVYFLKNINSALRLENGKG 229
             VD   +       +++A+  D  N   P+AF   +   +DSW +FL  I    ++   +G
Sbjct:   384 VDTKNLGGKYKMKLMIASAFDATNQYFPLAFAVTKEVSVDSWRWFLTRIRE--KVTQRQG 441

Query:   230 LCILGDGDNGVEYAVEE-----FLPRAVYRQCCHRIFNEMVRRFPTAPVQHLFWSACRTT 284
             +C++   D  +   + E       P A +R C + + +++    P       F      +
Sbjct:   442 ICLISSPDPDILAVINEPGSQWKEPWAYHRFCLYHLCSKLCSVSPGFDYNMHFLVDEAGS 501

Query:   285 SATSQECHDWLKN---SNWERW 303
             S+  +E   ++K     N E W
Sbjct:   502 SSQKEEFDSYMKEIKERNPEAW 523

 Score = 107 (42.7 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
 Identities = 22/88 (25%), Positives = 42/88 (47%)

Query:   363 YREKVTPTVQDIIHDRCSDGRRFILNMDAMSCSCGLWQISGIPCAHACRGIKYMRRKIED 422
             Y+  + P  +  +  + +D    I+ ++  +C+CG +Q +  PC HA      ++     
Sbjct:   628 YQVSMAPKKKTRLMGQSNDSTSGIVQLNDTTCTCGEFQKNKFPCLHALAVCDELKINPLQ 687

Query:   423 YVDSMMSVQNYMSTYAPGMMQLPQEYAW 450
             YVD   +V+ Y  TY+     +P+  AW
Sbjct:   688 YVDDCYTVERYHKTYSAKFSPVPELSAW 715


>TAIR|locus:2014230 [details] [associations]
            symbol:AT1G64260 "AT1G64260" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00575 InterPro:IPR004332 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008270 EMBL:AC066689
            InterPro:IPR018289 Pfam:PF10551 Pfam:PF03108 eggNOG:NOG303426
            HOGENOM:HOG000152182 ProtClustDB:CLSN2682695 IPI:IPI00526445
            RefSeq:NP_176608.2 UniGene:At.66093 EnsemblPlants:AT1G64260.1
            GeneID:842731 KEGG:ath:AT1G64260 TAIR:At1g64260 InParanoid:Q9C7V1
            OMA:HDHELGL PhylomeDB:Q9C7V1 Genevestigator:Q9C7V1 Uniprot:Q9C7V1
        Length = 719

 Score = 154 (59.3 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
 Identities = 66/312 (21%), Positives = 128/312 (41%)

Query:     2 ENRSHIVSCECSDLSCDWQVTAIRDVRGKGFV-ITQFSPKHNCPRLDHAFHPASKWISAM 60
             E    + + EC    C W + A R +   G V IT+++  H C   ++     S++ +  
Sbjct:   216 ETEKEMYTFECVRWKCKWSLRAAR-MEEHGLVEITKYTGPHTCSH-EYPNDFESEFAADE 273

Query:    61 FLHRWKEQPSISTTEVRNEIESMYGIKCPEWKVFCAANRA-KQILGLDYDDGYAMLHQFK 119
                  + QP++S  E++   +   G +    K+        K++ G D D  + ++ +  
Sbjct:   274 IERVVRIQPTLSIAELKKWWKEKTGYELQTSKMRDGKLEVIKRVFG-DEDQSFRVMPKL- 331

Query:   120 EEMERIDRDNIVLVXXXXXXXXX--XXXFKRVFVCCARTSYAFKVHCRGILAVDGWEINN 177
               +      N +LV              F+ VF   +++   F+ HCR ++ VD   +N 
Sbjct:   332 --ISAFHSSNGLLVDWQYDLFPNPDFASFRGVFWSFSQSIEGFQ-HCRPLIVVDTKSLNG 388

Query:   178 PCNSVMLVAAGLDGNNGILPVAFCEVQVEDLDSWVYFLKNINSALRLENGKGLCILGDGD 237
                  +++A+G+D  N   P+AF   +    DSW +F   I    ++   K LC++    
Sbjct:   389 KYQLKLMIASGVDAANKFFPLAFAVTKEVSTDSWRWFFTKIRE--KVTQRKDLCLISSPL 446

Query:   238 NGVEYAVEE--FL---PRAVYRQCCHRIFNEMVRRFPTAPVQHLFWSACRTTSATSQECH 292
               +   V E   L   P A ++ C + + ++ +  F    ++ L   A  T      + +
Sbjct:   447 RDIVAVVNEPGSLWQEPWAHHKFCLNHLRSQFLGVFRDYNLESLVEQAGSTNQKEEFDSY 506

Query:   293 -DWLKNSNWERW 303
              + +K  N E W
Sbjct:   507 MNDIKEKNPEAW 518

 Score = 111 (44.1 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
 Identities = 40/159 (25%), Positives = 66/159 (41%)

Query:   301 ERWALF--C--MPHW-VKCTCVTLTITEKLRTSFDHYLEMSITRRFTAIARSTAEIFERR 355
             +R ALF  C   P+  V  T   + + ++LR+SFD  L  SI          T    ++ 
Sbjct:   545 DREALFAVCRGFPYCTVAMTGGVMLMFDELRSSFDKSLS-SIYSSLNRGVVYTEPFMDKL 603

Query:   356 RMVVWKWYREKVTPTVQDIIH-DRCSDGRRFILNMDAMSCSCGLWQISGIPCAHACRGIK 414
                +       +T   +D       S+   +I+ ++  +C+C  +Q    PC HA    +
Sbjct:   604 EEFMTDSIPYVITQLERDSFKVSESSEKEEWIVQLNVSTCTCRKFQSYKFPCLHALAVFE 663

Query:   415 YMRRKIEDYVDSMMSVQNYMSTYAPGMMQLPQEYAWKWD 453
              ++     YVD   +V+ Y  TYA     +P   AW  D
Sbjct:   664 KLKINPLQYVDECYTVEQYCKTYAATFSPVPDVAAWPED 702


>TAIR|locus:1006230722 [details] [associations]
            symbol:AT1G64255 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434
            PROSITE:PS50966 SMART:SM00575 InterPro:IPR004332 EMBL:CP002684
            GO:GO:0008270 InterPro:IPR018289 Pfam:PF10551 Pfam:PF03108
            IPI:IPI00538919 RefSeq:NP_974088.1 UniGene:At.66092 PRIDE:F4I6P0
            EnsemblPlants:AT1G64255.1 GeneID:2745850 KEGG:ath:AT1G64255
            OMA:ECHELPI Uniprot:F4I6P0
        Length = 750

 Score = 159 (61.0 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
 Identities = 73/317 (23%), Positives = 127/317 (40%)

Query:    11 ECSDLSCDWQVTAIRDVRGKGFV-ITQFSPKHNC-PRLDHAFHPASKWISAMFLHRWKEQ 68
             EC    C W + A R ++  G V I +++  H C P +   F   S++ +       +  
Sbjct:   232 ECIRWKCKWSLGAAR-MKKHGLVEIIKYTGPHTCHPIVPEDFK--SEFETDEIERAVRYM 288

Query:    69 PSISTTEVRNEIESMYGIKCPEWKVFCAANRA-KQILGLDYDDGYAMLHQFKEEMERIDR 127
             P+ + +E++   +   G +     V  A  +A K++ G D+D  +     F + M  +  
Sbjct:   289 PTQTISELKKWWKKKIGYELETSDVRLAKEKAIKRVFG-DWDQSF---EDFPKLMSALCS 344

Query:   128 DNIVLVXXXXXXXXX--XXXFKRVFVCCARTSYAFKVHCRGILAVDGWEINNPCNSVMLV 185
              N +LV              F  VF    ++   F+ HCR ++ VD   +N      +++
Sbjct:   345 SNGLLVDWKYDLFPNPNFASFCGVFWAFPQSIEGFQ-HCRPLIVVDTKNLNCEYQLKLMI 403

Query:   186 AAGLDGNNGILPVAFCEVQVEDLDSWVYFLKNINSALRLENGKGLCILGDGDNGVEYAVE 245
             A+G+D  N   P+AF   +    D W +FL  I    ++   KGLC++      +   V 
Sbjct:   404 ASGVDAANKYFPLAFAVTKEVSTDIWRWFLTGIRE--KVTQRKGLCLISSPHPDIIAVVN 461

Query:   246 EF-----LPRAVYRQCCHRIFNEMVRRFPT----APVQHL--------FWSACRTTSATS 288
             E       P A +R   +  +++  R FP+    A ++          F S        +
Sbjct:   462 ESGSQWQEPWAYHRFSLNHFYSQFSRVFPSFCLGARIRRAGSTSQKDEFVSYMNDIKEKN 521

Query:   289 QECHDWLKNSNWERWAL 305
              E   WL      RWAL
Sbjct:   522 PEARKWLDQFPQNRWAL 538

 Score = 96 (38.9 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
 Identities = 35/138 (25%), Positives = 56/138 (40%)

Query:   319 LTITEKLRTSFDHYLEMSITRR-----FTAIARSTAEIFERRRMVVWKWYREKVTPTVQD 373
             L + ++LR+ FD     S +       +T       E F R   V + +    VTP   +
Sbjct:   575 LLLFDELRSKFDKSFSCSRSSLNCGDVYTEPVMDKLEEF-RTTFVTYSYI---VTPLDNN 630

Query:   374 IIHDRCS-DGRRFILNMDAMSCSCGLWQISGIPCAHACRGIKYMRRKIEDYVDSMMSVQN 432
                   + D    I+ +   SC+CG +Q    PC HA    K ++     YVD   +++ 
Sbjct:   631 AFQVATALDKGECIVQLSDCSCTCGDFQRYKFPCLHALAVCKKLKFNPLQYVDDCYTLER 690

Query:   433 YMSTYAPGMMQLPQEYAW 450
                TYA     +P+  AW
Sbjct:   691 LKRTYATIFSHVPEMSAW 708


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.136   0.462    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      454       442   0.00090  118 3  11 22  0.44    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  631 (67 KB)
  Total size of DFA:  356 KB (2174 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  34.72u 0.18s 34.90t   Elapsed:  00:00:01
  Total cpu time:  34.73u 0.18s 34.91t   Elapsed:  00:00:01
  Start:  Thu May  9 16:43:54 2013   End:  Thu May  9 16:43:55 2013

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