BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043260
(332 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 224 bits (571), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 179/326 (54%), Gaps = 6/326 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGF-PLPLFPR 69
++ A V W +P +E++QV PP+A EVR K+LY ++CHTD + G P LFP
Sbjct: 23 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPEGLFPC 82
Query: 70 VLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLC--LKYPFTFHGL 127
VLGHE G+VES+G+ V E++ GD VIP + ECREC+ C S NLC ++ +
Sbjct: 83 VLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVM 142
Query: 128 MPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGA 187
M D SR SI G+ +YH ST ++Y VV V K+DP L L CG +G GA
Sbjct: 143 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGA 202
Query: 188 AWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFIN 247
W KVE + A+ GA++IIGID + + D+ + FG+T+FIN
Sbjct: 203 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFIN 262
Query: 248 PDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKV 307
P E + I +++ ++T G GVDY FEC G S++ ALE G G + +G A +
Sbjct: 263 P-KEHEQPIQQVIVDLTDG-GVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQE 320
Query: 308 PLNFP-AIALGRNLKGTIFGGIKTKS 332
P + GR KGT FGG K++S
Sbjct: 321 ISTRPFQLVTGRVWKGTAFGGFKSRS 346
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/326 (37%), Positives = 179/326 (54%), Gaps = 6/326 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGF-PLPLFPR 69
++ A V + +P +E++QV PP+A EVR K+LY ++CHTD + G P LFP
Sbjct: 5 QVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPC 64
Query: 70 VLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLC--LKYPFTFHGL 127
+LGHE G+VES+G+ V E++ GD VIP + ECREC+ C S NLC ++ +
Sbjct: 65 ILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIM 124
Query: 128 MPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGA 187
M D SR S+ G+ +YH ST ++Y VV V K+DP+ L L CG +G GA
Sbjct: 125 MNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGA 184
Query: 188 AWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFIN 247
W KVE + A+ GA++IIGID + + + + FG+ +F+N
Sbjct: 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVN 244
Query: 248 PDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKV 307
P D +K I E++ ++T G GVDY FEC G S++ ALE G G + +G A +
Sbjct: 245 PKDH-DKPIQEVIVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 302
Query: 308 PLNFP-AIALGRNLKGTIFGGIKTKS 332
P + GR KGT FGG K+++
Sbjct: 303 ISTRPFQLVTGRVWKGTAFGGFKSRT 328
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/317 (41%), Positives = 178/317 (56%), Gaps = 5/317 (1%)
Query: 17 AVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGF-PLPLFPRVLGHEG 75
A V W G+P +EEI+V PPKA EVR K++ ++CHTD + G P FP +LGHEG
Sbjct: 10 AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEG 69
Query: 76 VGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMPDGSSR 134
G+VES+G+ V +LK GD VIP +I +C EC+ C + NLC K T GLMPDG+SR
Sbjct: 70 AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSR 129
Query: 135 MSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKV 194
+ +G+ + H ST +EY VV V K+DP L L CG S+G+GAA K+
Sbjct: 130 FTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKL 189
Query: 195 EKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNK 254
E + ++ GA++IIG+D N + + + FG T+ INP D +K
Sbjct: 190 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SK 248
Query: 255 SISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFP-A 313
I E++ EMT G GVDY FEC G ++ ALEA G G + +G A + P
Sbjct: 249 PIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQ 307
Query: 314 IALGRNLKGTIFGGIKT 330
+ GR KGT FGG K+
Sbjct: 308 LVTGRTWKGTAFGGWKS 324
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/317 (41%), Positives = 178/317 (56%), Gaps = 5/317 (1%)
Query: 17 AVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGF-PLPLFPRVLGHEG 75
A V W G+P +EEI+V PPKA EVR K++ ++CHTD + G P FP +LGHEG
Sbjct: 10 AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEG 69
Query: 76 VGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMPDGSSR 134
G+VES+G+ V +LK GD VIP +I +C EC+ C + NLC K T GLMPDG+SR
Sbjct: 70 AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSR 129
Query: 135 MSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKV 194
+ +G+ + H ST +EY VV V K+DP L L CG S+G+GAA K+
Sbjct: 130 FTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKL 189
Query: 195 EKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNK 254
E + ++ GA++IIG+D N + + + FG T+ INP D +K
Sbjct: 190 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SK 248
Query: 255 SISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFP-A 313
I E++ EMT G GVDY FEC G ++ ALEA G G + +G A + P
Sbjct: 249 PIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQ 307
Query: 314 IALGRNLKGTIFGGIKT 330
+ GR KGT FGG K+
Sbjct: 308 LVTGRTWKGTAFGGWKS 324
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/317 (41%), Positives = 178/317 (56%), Gaps = 5/317 (1%)
Query: 17 AVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGF-PLPLFPRVLGHEG 75
A V W G+P +EEI+V PPKA EVR K++ ++CHTD + G P FP +LGHEG
Sbjct: 9 AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEG 68
Query: 76 VGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMPDGSSR 134
G+VES+G+ V +LK GD VIP +I +C EC+ C + NLC K T GLMPDG+SR
Sbjct: 69 AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSR 128
Query: 135 MSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKV 194
+ +G+ + H ST +EY VV V K+DP L L CG S+G+GAA K+
Sbjct: 129 FTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKL 188
Query: 195 EKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNK 254
E + ++ GA++IIG+D N + + + FG T+ INP D +K
Sbjct: 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SK 247
Query: 255 SISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFP-A 313
I E++ EMT G GVDY FEC G ++ ALEA G G + +G A + P
Sbjct: 248 PIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQ 306
Query: 314 IALGRNLKGTIFGGIKT 330
+ GR KGT FGG K+
Sbjct: 307 LVTGRTWKGTAFGGWKS 323
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 176/326 (53%), Gaps = 10/326 (3%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A + W G P +EEI+V PPKA EVR +++ +CHTD+ ++ LFP V
Sbjct: 5 KVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPKKKALFPVV 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLC-----LKYPFTFH 125
LGHE G+VES+G V K GD VIP F +C+ C+ C S + NLC KYP
Sbjct: 65 LGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQ 124
Query: 126 GLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGF 185
LM D +SR + +G+ +YH S+ ++Y VV + +VD +L + CG+SSG+
Sbjct: 125 ELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGY 184
Query: 186 GAAWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDF 245
GAA KV + +I GA++II ID N + K +A G TD
Sbjct: 185 GAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDC 244
Query: 246 INPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGA-ANE 304
+NP E +K + +++ E+T G GVDY +C G A + A++ T LG G +GA +E
Sbjct: 245 LNP-RELDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE 302
Query: 305 AKVPLNFPAIALGRNLKGTIFGGIKT 330
+P + LGR++ GT FGG K+
Sbjct: 303 MTIPT--VDVILGRSINGTFFGGWKS 326
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 215 bits (547), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 178/322 (55%), Gaps = 3/322 (0%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W + +P+ +EEI+V PPK EVR K+L IC TD KG + FP +
Sbjct: 5 KVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSKFPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPD 130
+GHE G+VESIG+ V +K GD VIP F+ +CREC C + NLC++ T G++ D
Sbjct: 65 VGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLAD 124
Query: 131 GSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWK 190
G++R + +G+ ++H ST TEY VVD + V K+D + + CG+S+G+GAA K
Sbjct: 125 GTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVK 184
Query: 191 EFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD 250
KV+ + + GA++IIGID N + +K A G T+ I+P D
Sbjct: 185 TGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKD 244
Query: 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLN 310
K ISE++ EMT G V Y FE G + +AL + + G + +G AK+
Sbjct: 245 S-TKPISEVLSEMT-GNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTY 302
Query: 311 FPAIAL-GRNLKGTIFGGIKTK 331
P + GR KG +FGG+K++
Sbjct: 303 DPMLLFTGRTWKGCVFGGLKSR 324
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 214 bits (546), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 178/322 (55%), Gaps = 3/322 (0%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W + +P+ +EEI+V PPK EVR K+L IC TD KG + FP +
Sbjct: 5 KVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSKFPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPD 130
+GHE G+VESIG+ V +K GD VIP F+ +CREC C + NLC++ T G++ D
Sbjct: 65 VGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLAD 124
Query: 131 GSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWK 190
G++R + +G+ ++H ST TEY VVD + V K+D + + CG+S+G+GAA K
Sbjct: 125 GTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVK 184
Query: 191 EFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD 250
KV+ + + GA++IIGID N + +K A G T+ I+P D
Sbjct: 185 TGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKD 244
Query: 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLN 310
K ISE++ EMT G V Y FE G + +AL + + G + +G AK+
Sbjct: 245 S-TKPISEVLSEMT-GNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTY 302
Query: 311 FPAIAL-GRNLKGTIFGGIKTK 331
P + GR KG +FGG+K++
Sbjct: 303 DPMLLFTGRTWKGCVFGGLKSR 324
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/317 (41%), Positives = 177/317 (55%), Gaps = 5/317 (1%)
Query: 17 AVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGF-PLPLFPRVLGHEG 75
A V W G+P +EEI+V PPKA EVR K++ ++CHTD + G P FP +LGH G
Sbjct: 9 AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLG 68
Query: 76 VGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMPDGSSR 134
G+VES+G+ V +LK GD VIP +I +C EC+ C + NLC K T GLMPDG+SR
Sbjct: 69 AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSR 128
Query: 135 MSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKV 194
+ +G+ + H ST +EY VV V K+DP L L CG S+G+GAA K+
Sbjct: 129 FTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKL 188
Query: 195 EKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNK 254
E + ++ GA++IIG+D N + + + FG T+ INP D +K
Sbjct: 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SK 247
Query: 255 SISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFP-A 313
I E++ EMT G GVDY FEC G ++ ALEA G G + +G A + P
Sbjct: 248 PIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQ 306
Query: 314 IALGRNLKGTIFGGIKT 330
+ GR KGT FGG K+
Sbjct: 307 LVTGRTWKGTAFGGWKS 323
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 175/326 (53%), Gaps = 10/326 (3%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A + W G P +EEI+V PPKA EVR +++ +C TD+ ++ LFP V
Sbjct: 5 KVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPVV 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLC-----LKYPFTFH 125
LGHE G+VES+G V K GD VIP F +C+ C+ C S + NLC KYP
Sbjct: 65 LGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQ 124
Query: 126 GLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGF 185
LM D +SR + +G+ +YH S+ ++Y VV + +VD +L + CG+SSG+
Sbjct: 125 ELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGY 184
Query: 186 GAAWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDF 245
GAA KV + +I GA++II ID N + K +A G TD
Sbjct: 185 GAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDC 244
Query: 246 INPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGA-ANE 304
+NP E +K + +++ E+T G GVDY +C G A + A++ T LG G +GA +E
Sbjct: 245 LNP-RELDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE 302
Query: 305 AKVPLNFPAIALGRNLKGTIFGGIKT 330
+P + LGR++ GT FGG K+
Sbjct: 303 MTIPT--VDVILGRSINGTFFGGWKS 326
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 211 bits (538), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 180/328 (54%), Gaps = 11/328 (3%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTD--VLSSKGFPLPLFP 68
K+ A + W G+P +EE++V PPKA EVR +++ S+CHTD V+ SK F FP
Sbjct: 7 KVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSK-FEGLAFP 65
Query: 69 RVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLC-----LKYPFT 123
++GHE G+VESIG V +K GD VIP + CR+C+ C S + NLC LK P +
Sbjct: 66 VIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPAS 125
Query: 124 FHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSS 183
LM D +SR + +G+ +YH F ST ++Y VV + K+D +L L CG+S+
Sbjct: 126 DQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFST 185
Query: 184 GFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMT 243
G+GAA KV + + GA++IIGID N + K +A G T
Sbjct: 186 GYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGAT 245
Query: 244 DFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN 303
D +NP D +K I E++ E+T G GVD+ +C G + + AL+ T G G IG A
Sbjct: 246 DCLNPRDL-HKPIQEVIIELTKG-GVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAA 303
Query: 304 EAKVPLNFP-AIALGRNLKGTIFGGIKT 330
+K FP + +GR + GT FGG K+
Sbjct: 304 GSKGLTVFPEELIIGRTINGTFFGGWKS 331
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/323 (36%), Positives = 172/323 (53%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSS-KGFPLPLFPR 69
K+ A V W +P +EEI+V+ P A E+R K++ +CHTD+ +G FP
Sbjct: 5 KVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPV 64
Query: 70 VLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLK-YPFTFHGLM 128
VLGHEG G+VES+G V E + G+ VIP FI +C EC C S N C+K + +M
Sbjct: 65 VLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM 124
Query: 129 PDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAA 188
+R + +G+K+ ST ++Y VV+ V K+DPS L L CG S+GFGAA
Sbjct: 125 SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAA 184
Query: 189 WKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINP 248
KVE + GA +II +D NP + +K + FG TDF+NP
Sbjct: 185 VNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP 244
Query: 249 DDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVP 308
+D ++ IS+++ +MT+G GVD+ EC G ++ ALE+ G G + +G + V
Sbjct: 245 NDH-SEPISQVLSKMTNG-GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVA 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+ GR KG++FGG K K
Sbjct: 303 TRPIQLIAGRTWKGSMFGGFKGK 325
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/322 (36%), Positives = 173/322 (53%), Gaps = 3/322 (0%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W + +P+ +EE++V PPKA EVR KM+ A IC +D G + P +
Sbjct: 5 KVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPD 130
GHE G+VESIG+ V ++ GD VIP FI +C +C C NLCLK G M D
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQD 124
Query: 131 GSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWK 190
G+SR + RG+ ++H ST ++Y VVD V K+D + L + CG+S+G+G+A K
Sbjct: 125 GTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVK 184
Query: 191 EFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD 250
KV + + + GAA+IIG+D N + K + G T+ +NP D
Sbjct: 185 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQD 244
Query: 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VPL 309
K I E++ EM++G GVD+ FE G + AL + G + +G +++ + +
Sbjct: 245 Y-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSM 302
Query: 310 NFPAIALGRNLKGTIFGGIKTK 331
N + GR KG IFGG K+K
Sbjct: 303 NPMLLLSGRTWKGAIFGGFKSK 324
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/322 (36%), Positives = 173/322 (53%), Gaps = 3/322 (0%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W + +P+ +EE++V PPKA EVR KM+ A IC +D G + P +
Sbjct: 5 KVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPD 130
GHE G+VESIG+ V ++ GD VIP FI +C +C C NLCLK G M D
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQD 124
Query: 131 GSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWK 190
G+SR + RG+ ++H ST ++Y VVD V K+D + L + CG+S+G+G+A K
Sbjct: 125 GTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVK 184
Query: 191 EFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD 250
KV + + + GAA+IIG+D N + K + G T+ +NP D
Sbjct: 185 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQD 244
Query: 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VPL 309
K I E++ EM++G GVD+ FE G + AL + G + +G +++ + +
Sbjct: 245 Y-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSM 302
Query: 310 NFPAIALGRNLKGTIFGGIKTK 331
N + GR KG IFGG K+K
Sbjct: 303 NPMLLLSGRTWKGAIFGGFKSK 324
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 171/323 (52%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W E +P+ +EE++V PPKA EVR KM+ IC +D G + P +
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTLVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMP 129
GHE G+VESIG+ V ++ GD VIP F +C +C C N CLK + G M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+SR + RG+ ++H ST ++Y VVD V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
K KV + + + GAA+IIG+D N R K + G T+ +NP
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECVNPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++ EM++G GVD+ FE G + AL + G + +G +++ +
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG IFGG K+K
Sbjct: 303 MNPMLLLSGRTWKGAIFGGFKSK 325
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 197 bits (501), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 171/323 (52%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W E +P+ +EE++V PPKA EVR KM+ IC +D G + P +
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMP 129
GHE G+VESIG+ V ++ GD VIP F +C +C C N CLK + G M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+SR + RG+ ++H ST ++Y VVD V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
K KV + + + GAA+IIG+D N + K + G T+ +NP
Sbjct: 185 KVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++ EM++G GVD+ FE G + AL + G + +G +++ +
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG IFGG K+K
Sbjct: 303 MNPMLLLSGRTWKGAIFGGFKSK 325
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 197 bits (501), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 171/323 (52%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W E +P+ +EE++V PPKA EVR KM+ IC +D G + P +
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMP 129
GHE G+VESIG+ V ++ GD VIP F +C +C C N CLK + G M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+SR + RG+ ++H ST ++Y VVD V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
K KV + + + GAA+IIG+D N + K + G T+ +NP
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++ EM++G GVD+ FE G + AL + G + +G +++ +
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG IFGG K+K
Sbjct: 303 MNPMLLLSGRTWKGAIFGGFKSK 325
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 197 bits (501), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 171/323 (52%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W E +P+ +EE++V PPKA EVR KM+ IC +D G + P +
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMP 129
GHE G+VESIG+ V ++ GD VIP F +C +C C N CLK + G M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+SR + RG+ ++H ST ++Y VVD V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
K KV + + + GAA+IIG+D N + K + G T+ +NP
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++ EM++G GVD+ FE G + AL + G + +G +++ +
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG IFGG K+K
Sbjct: 303 MNPMLLLSGRTWKGCIFGGFKSK 325
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 170/323 (52%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W E +P+ +EE++V PPKA EVR KM+ IC +D G + P +
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMP 129
GHE G+VESIG+ V ++ GD VIP F +C +C C N CLK + G M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+SR + RG+ ++H ST ++Y VVD V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
K KV + + + GAA+IIG+D N + K + G T+ +NP
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++ EM++G GVD+ FE G + AL + G + G +++ +
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG IFGG K+K
Sbjct: 303 MNPMLLLSGRTWKGAIFGGFKSK 325
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 170/323 (52%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W E +P+ +EE++V PPKA EVR KM+ IC +D G + P +
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMP 129
GHE G+VESIG+ V ++ GD VIP F +C +C C N CLK + G M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+SR + RG+ ++H ST ++Y VVD V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
K KV + + + GAA+IIG+D N + K + G T+ +NP
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++ EM++G GVD+ FE G + AL + G + + +++ +
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG IFGG K+K
Sbjct: 303 MNPMLLLSGRTWKGAIFGGFKSK 325
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 171/323 (52%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W E +P+ +EE++V PPKA EVR KM+ IC +D G + P +
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMP 129
GHE G+VESIG+ V ++ GD VIP + +C +C C N CLK + G M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+SR + RG+ ++H ST ++Y VVD V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
K KV + + + GAA+IIG+D N + K + G T+ +NP
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++ EM++G GVD+ FE G + AL + G + +G +++ +
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG IFGG K+K
Sbjct: 303 MNPMLLLSGRTWKGAIFGGFKSK 325
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 171/323 (52%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W E +P+ +EE++V PPKA EVR KM+ IC +D G + P +
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMP 129
GHE G+VESIG+ V ++ GD VIP + +C +C C N CLK + G M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+SR + RG+ ++H ST ++Y VVD V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
K KV + + + GAA+IIG+D N + K + G T+ +NP
Sbjct: 185 KVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++ EM++G GVD+ FE G + AL + G + +G +++ +
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG IFGG K+K
Sbjct: 303 MNPMLLLSGRTWKGAIFGGFKSK 325
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 170/323 (52%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W E +P+ +EE++V PPKA EVR KM+ IC +D G + P +
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMP 129
GHE G+VESIG+ V ++ GD VIP F +C +C C N CLK + G M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+SR + RG+ ++H ST ++Y VVD V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
K KV + + + GAA+IIG+D N + K + G T+ +NP
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++ EM++G GVD+ FE G + AL + G + G +++ +
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG IFGG K+K
Sbjct: 303 MNPMLLLSGRTWKGAIFGGFKSK 325
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 170/323 (52%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W E +P+ +EE++V PPKA EVR KM+ IC +D G + P +
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMP 129
GHE G+VESIG+ V ++ GD VIP +C +C C N CLK + G M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+SR + RG+ ++H ST ++Y VVD V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
K KV + + + GAA+IIG+D N + K + G T+ +NP
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++ EM++G GVD+ FE G + AL + G + +G +++ +
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG IFGG K+K
Sbjct: 303 MNPMLLLSGRTWKGAIFGGFKSK 325
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W +P+ +E+++V PPKA EVR KM+ ICHTD G + P +
Sbjct: 5 KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNLVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPF-TFHGLMP 129
LGHE G+VES+G+ V +K GD VIP F +C +C C + +N CLK G +
Sbjct: 65 LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+ R + RG+ ++H ST ++Y VVD N V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
KV + + GAA+II +D N + K + G T+ INP
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++KEMT G GVD+ FE G + +L G + +G ++ +
Sbjct: 245 DY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG ++GG K+K
Sbjct: 303 INPMLLLTGRTWKGAVYGGFKSK 325
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 169/323 (52%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W +P+ +EE++V PPKA EVR KM+ A IC +D G + P +
Sbjct: 5 KVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPF-TFHGLMP 129
LGHE G+VES+G+ V +K GD VIP F +C +C C + +N CLK G +
Sbjct: 65 LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+ R + G+ ++H ST ++Y VVD N V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
K KV + + GAA+II +D N + K + G T+ INP
Sbjct: 185 KVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++KEMT G GVD+ FE G + +L G + +G +++ +
Sbjct: 245 DY-KKPIQEVLKEMTDG-GVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG IFGG K+K
Sbjct: 303 INPMLLLTGRTWKGAIFGGFKSK 325
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 167/323 (51%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W +P+ +E+++V PPKA EVR KM+ IC TD G + P +
Sbjct: 5 KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPF-TFHGLMP 129
LGHE G+VES+G+ V +K GD VIP F +C +C C + +N CLK G +
Sbjct: 65 LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+ R + RG+ ++H ST ++Y VVD N V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
KV + + GAA+II +D N + K + G T+ INP
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++KEMT G GVD+ FE G + +L G + +G ++ +
Sbjct: 245 DY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG ++GG K+K
Sbjct: 303 INPMLLLTGRTWKGAVYGGFKSK 325
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 167/323 (51%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W +P+ +E+++V PPKA EVR KM+ IC TD G + P +
Sbjct: 5 KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPF-TFHGLMP 129
LGHE G+VES+G+ V +K GD VIP F +C +C C + +N CLK G +
Sbjct: 65 LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+ R + RG+ ++H ST ++Y VVD N V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
KV + + GAA+II +D N + K + G T+ INP
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++KEMT G GVD+ FE G + +L G + +G ++ +
Sbjct: 245 DY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG ++GG K+K
Sbjct: 303 INPMLLLTGRTWKGAVYGGFKSK 325
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W +P+ +EE++V PPKA EVR KM+ IC TD G + P +
Sbjct: 5 KVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMP 129
LGHE G+VES+G+ V +K GD VIP I +C +C C + +N CLK + G +
Sbjct: 65 LGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+SR + R + ++H ST ++Y VVD N V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
KV + + GAA+II +D N + K + G T+ INP
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++KEMT G GVD+ FE G + +L G + +G +++ +
Sbjct: 245 DY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG I GG K+K
Sbjct: 303 MNPMLLLTGRTWKGAILGGFKSK 325
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 167/323 (51%), Gaps = 4/323 (1%)
Query: 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRV 70
K+ A V W +P+ +E+++V PPKA EVR KM+ IC TD G + P +
Sbjct: 5 KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVSGNLVTPLPVI 64
Query: 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPF-TFHGLMP 129
LGHE G+VES+G+ V +K GD VIP F +C +C C + +N CLK G +
Sbjct: 65 LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 130 DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAW 189
DG+ R + RG+ ++H ST ++Y VVD N V K+D + L + CG+S+G+G+A
Sbjct: 125 DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
KV + + GAA+II +D N + K + G T+ INP
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQ 244
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VP 308
D K I E++KEMT G GVD+ FE G + +L G + +G ++ +
Sbjct: 245 DY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLS 302
Query: 309 LNFPAIALGRNLKGTIFGGIKTK 331
+N + GR KG ++GG K+K
Sbjct: 303 INPMLLLTGRTWKGAVYGGFKSK 325
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 169/315 (53%), Gaps = 5/315 (1%)
Query: 17 AVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRVLGHEGV 76
A V W +P +E I V PPKA EVR K+L + IC +D K FP +LGHE V
Sbjct: 12 AAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVILGHEAV 71
Query: 77 GMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFH-GLMPDGSSRM 135
G+VESIG V +K GD VIP F+ +C C C S +N C K GLM D +SR
Sbjct: 72 GVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRF 131
Query: 136 SIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVE 195
+ RG+ +Y++ ST TEY VV V K+DP L + + CG+++G+GAA KV
Sbjct: 132 TCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVT 190
Query: 196 KXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKS 255
+ + GA++IIG+ + + K G T+ +NP D +K
Sbjct: 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDY-DKP 249
Query: 256 ISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN-EAKVPLNFPAI 314
I E++ E T+G GVDY EC G + AL++T G G + +G A+ ++PL+ +
Sbjct: 250 IYEVICEKTNG-GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLL 308
Query: 315 ALGRNLKGTIFGGIK 329
GR+LKG++FGG K
Sbjct: 309 LTGRSLKGSVFGGFK 323
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 15/300 (5%)
Query: 7 ISFLKIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTD-VLSSKGFPLP 65
+S LK AA C +G ++++ +++ P+ EV K++ +CHTD ++ + +P+P
Sbjct: 1 MSELKDIIAAVTPC--KGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP 58
Query: 66 LFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLK-YPFTF 124
L P VLGHEG G++E+IG V EL+ GD V+ ++ G C +C C + C + + F
Sbjct: 59 L-PAVLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNF 116
Query: 125 HGLMPDGSSRMSIRGQKLY--HIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYS 182
G +G+ + Q + H F S+ Y + N VKV + + L G L CG
Sbjct: 117 SGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQ 176
Query: 183 SGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGM 242
+G GA KV + A++ GA+ II +D R + + G
Sbjct: 177 TGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA 236
Query: 243 TDFINPD-DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGA 301
T IN +P +I KE+T G GV++ E TG ++ + ++A + GK+ +GA
Sbjct: 237 THVINSKTQDPVAAI----KEITDG-GVNFALESTGSPEILKQGVDALGI-LGKIAVVGA 290
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 129/295 (43%), Gaps = 32/295 (10%)
Query: 41 EVRFKMLYASICHTDVLSSKG-FPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIV-IPT 98
+VRFK+LY +CH+D+ S K + ++P V GHE VG V +G +VK++ GD V +
Sbjct: 43 DVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGC 102
Query: 99 FIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVD 158
+G C CE+C +++ N C K T+ + DG+ T + +MV +
Sbjct: 103 LVGACHSCESCANDLENYCPKMILTYASIYHDGT-------------ITYGGYSNHMVAN 149
Query: 159 ANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDRARI 218
Y+++ ++ L L C + + + K F +++ +
Sbjct: 150 ERYIIRFPDNMPLDGGAPLLCAGITVY-SPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAK 208
Query: 219 QGAAKIIGIDKNPCRKDKG-EAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTG 277
+K+ I +P +K++ + FG F+ D+ ++M G G T
Sbjct: 209 AFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQ---------EQMQAAAGTLDGIIDTV 259
Query: 278 VASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL--GRNL-KGTIFGGIK 329
A L GK++ +GA + PL PA +L GR + G+ GG+K
Sbjct: 260 SAVHPLLPLFGLLKSHGKLILVGAPEK---PLELPAFSLIAGRKIVAGSGIGGMK 311
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 23/149 (15%)
Query: 17 AVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKG-FPL-PLFPRVLGHE 74
A V G P ++E+ V P +V+ K+ + +CHTD+ ++ G +P+ P P + GHE
Sbjct: 5 AAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHE 64
Query: 75 GVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSS 133
GVG V ++G V +KEGD V +P C CE+C LC K T +
Sbjct: 65 GVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGY-------- 116
Query: 134 RMSIRGQKLYHIFTCSTMTEYMVVDANYV 162
S+ G EY+V D NYV
Sbjct: 117 --SVNG----------GYGEYVVADPNYV 133
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 23/149 (15%)
Query: 17 AVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKG-FPL-PLFPRVLGHE 74
A V G P ++EE++V P +V K+ + +CHTD+ +++G +P+ P P + GHE
Sbjct: 9 AAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHE 68
Query: 75 GVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSS 133
GVG V ++G V +KEGD V IP C CE+C + LC T +
Sbjct: 69 GVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGY-------- 120
Query: 134 RMSIRGQKLYHIFTCSTMTEYMVVDANYV 162
S+ G EY++ D NYV
Sbjct: 121 --SVNG----------GYAEYVLADPNYV 137
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 26/179 (14%)
Query: 8 SFLKIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKG-FPL-P 65
S K AA V +G+ P ++E+ + P +++ + + +CHTD+ +++G +P+ P
Sbjct: 21 SMAKTMKAAVVRAFGK--PLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKP 78
Query: 66 LFPRVLGHEGVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTF 124
P + GHEGVG V ++G VK +KEGD V IP C C +C LC + T
Sbjct: 79 NPPFIPGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNTG 138
Query: 125 HGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLS-LAGFLSCGYS 182
+ S+ G EY+V D N+V + +ID + +A L G +
Sbjct: 139 Y----------SVNG----------GFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVT 177
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 121/299 (40%), Gaps = 30/299 (10%)
Query: 31 EIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRVLGHEGVGMVESIGDEVKELK 90
E ++ K E M Y +CHTD+ + G VLGHEG+G+V+ IG +V L+
Sbjct: 18 EKELRAIKPNEALLDMEYCGVCHTDLHVAAGDYGNKAGTVLGHEGIGIVKEIGADVSSLQ 77
Query: 91 EGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCS 149
GD V + F C CE C S C + G DG
Sbjct: 78 VGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNA--GYSVDGG----------------- 118
Query: 150 TMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXX 209
M E +V A+Y VKV +D A ++C + + A K V+
Sbjct: 119 -MAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTY-KAIKVSGVKPGDWQVIFGAGGLG 176
Query: 210 XXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD-EPNKSISELVKEMTHGTG 268
+ A+ AK+I +D N + + + G IN D P I K++T G G
Sbjct: 177 NLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVIINSGDVNPVDEI----KKITGGLG 232
Query: 269 VDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFG 326
V C VA + E A+ GK++A+ N ++ L+ P + G + G++ G
Sbjct: 233 VQSAIVCA-VARIAFEQAVASLKPMGKMVAVALPN-TEMTLSVPTVVFDGVEVAGSLVG 289
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 21 WGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKG-FPLPLFPRVLGHEGVGMV 79
+ + E +K + +V +LYA ICH+D+ S+ + ++P + GHE G++
Sbjct: 11 FSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGII 70
Query: 80 ESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIR 138
+ +G VK+ K GD+V + F+ C+ C+ C C K FT+ L + +
Sbjct: 71 KEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMG 130
Query: 139 GQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCG 180
G + +VVD NYV+ VD + L L C
Sbjct: 131 G-----------YSNNIVVDENYVISVDKNAPLEKVAPLLCA 161
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 121/299 (40%), Gaps = 30/299 (10%)
Query: 31 EIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRVLGHEGVGMVESIGDEVKELK 90
E ++ K E M Y +CHTD+ + G VLGHEG+G+V+ IG +V L+
Sbjct: 18 EKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGNKAGTVLGHEGIGIVKEIGADVSSLQ 77
Query: 91 EGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCS 149
GD V + F C CE C S C + G DG
Sbjct: 78 VGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNA--GYSVDGG----------------- 118
Query: 150 TMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXX 209
M E +V A+Y VKV +D A ++C + + A K V+
Sbjct: 119 -MAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTY-KAIKVSGVKPGDWQVIFGAGGLG 176
Query: 210 XXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD-EPNKSISELVKEMTHGTG 268
+ A+ AK+I +D N + + + G IN D P I K++T G G
Sbjct: 177 NLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEI----KKITGGLG 232
Query: 269 VDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFG 326
V C VA + E A+ GK++A+ N ++ L+ P + G + G++ G
Sbjct: 233 VQSAIVCA-VARIAFEQAVASLKPMGKMVAVAVPN-TEMTLSVPTVVFDGVEVAGSLVG 289
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 131/317 (41%), Gaps = 29/317 (9%)
Query: 17 AVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKG-FPLPLFPRVLGHEG 75
AV + +P + +I P +V+ ++ Y +CH+D+ + + ++P V GHE
Sbjct: 25 AVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEI 84
Query: 76 VGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSR 134
VG V ++GD+V++ GD+V + + C+ CE C + N C T++ PD
Sbjct: 85 VGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGH 144
Query: 135 MSIRGQKLYHIFTCSTMTEYMVVDANYVVKV-DPSIDLSLAGFLSCGYSSGFGAAWKEFK 193
T ++ +VV YV+++ P L+ L C + + + + ++
Sbjct: 145 ------------TLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTY-SPLRHWQ 191
Query: 194 VEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPN 253
+ A G A ++ + +++ +A G + +N +
Sbjct: 192 AGPGKKVGVVGIGGLGHMGIKLAHAMG-AHVVAFTTSEAKREAAKALGADEVVN-----S 245
Query: 254 KSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGK-GKVMAIGA-ANEAKVPLNF 311
++ E+ + + F VA+ + T L + G + +GA A K P F
Sbjct: 246 RNADEMAAHLK-----SFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVF 300
Query: 312 PAIALGRNLKGTIFGGI 328
I R + G++ GGI
Sbjct: 301 NLIMKRRAIAGSMIGGI 317
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 25 EPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKG-FPL-PLFPRVLGHEGVGMVESI 82
EP K++E++ EV ++ +CHTD+ ++ G +P+ P P + GHEGVG+VE +
Sbjct: 11 EPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEV 70
Query: 83 GDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQK 141
G V LK GD V IP C C+ C S LC QK
Sbjct: 71 GPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC--------------------EHQK 110
Query: 142 LYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGA 187
EY A+YVVK+ ++ A + C + + A
Sbjct: 111 NAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKA 156
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 25 EPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKG-FPL-PLFPRVLGHEGVGMVESI 82
EP K++E++ EV ++ +CHTD+ ++ G +P+ P P + GHEGVG+VE +
Sbjct: 11 EPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEV 70
Query: 83 GDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQK 141
G V LK GD V IP C C+ C S LC QK
Sbjct: 71 GPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC--------------------EHQK 110
Query: 142 LYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGA 187
EY A+YVVK+ ++ A + C + + A
Sbjct: 111 NAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKA 156
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 30 EEIQVEPPKATEVRFKMLYASICHTDVLSSKG-FPLPL-FPRVLGHEGVGMVESIGDEVK 87
++I V PKA E+ + Y+ +CHTD+ + G +PLP+ P V GHEG G+V +G+ VK
Sbjct: 21 KDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVK 80
Query: 88 ELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGS 132
K GD I G C CE C E+ N G DGS
Sbjct: 81 GWKIGDYAGIKWLNGSCMACEYC--ELGNESNCPHADLSGYTHDGS 124
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 17 AVVCWGEGEP--WKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFP--RVLG 72
AVV G P +V ++ V P EVR ++ A++ H DV KG P P VLG
Sbjct: 3 AVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLG 62
Query: 73 HEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKY 120
+G G+V+++G V+ GD V+ C CE C + NLC +Y
Sbjct: 63 ADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRY 110
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 116/290 (40%), Gaps = 31/290 (10%)
Query: 27 WKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLF----PRVLGHEGVGMVESI 82
++E+ + PK EV +M Y IC +DV + + F P V+GHE G V +
Sbjct: 16 LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKV 75
Query: 83 GDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKL 142
G VK LK+GD V CR C+ C NLC TF PD +
Sbjct: 76 GKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPD--LTFCATPPDDGN--------- 124
Query: 143 YHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKXXXXXX 202
+ Y V A++ K+ ++ L L S G A + V+
Sbjct: 125 --------LARYYVHAADFCHKLPDNVSLEEGALLE-PLSVGV-HACRRAGVQLGTTVLV 174
Query: 203 XXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFG--MTDFINPDDEPNKSISELV 260
+ A+ GA ++ ++P R + + G +T ++P E SI E +
Sbjct: 175 IGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERI 233
Query: 261 KEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPL 309
+ G + +C+G I+ + T+ G G +M +G ++ VPL
Sbjct: 234 RSAI-GDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQMVTVPL 281
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 130/327 (39%), Gaps = 33/327 (10%)
Query: 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKG----FPLPLFPRV 70
A A+V +P +E ++ + ++L A +C +DV +G PLP+ +
Sbjct: 18 AHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPI---I 74
Query: 71 LGHEGVGMVESIGDEVKEL-----KEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFH 125
LGHEG G V + E ++L K GD+++ C EC C K P+
Sbjct: 75 LGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVS------KEPY--- 125
Query: 126 GLMPDGSSRMSIRGQKLY-HIFTCSTMTEYMVVDANY-VVKVDPSIDLSLAGFLSCGYSS 183
L P+ RG Y H+ C + ++V+D V+KV DL + C ++
Sbjct: 126 -LCPNRKVYGINRGCSEYPHLRGC--YSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGAT 182
Query: 184 GFGA--AWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFG 241
+ A + E K + AR GA +I I +P R E G
Sbjct: 183 AYHAFDEYPESFAGKTVVIQGAGPLGLFGVVI--ARSLGAENVIVIAGSPNRLKLAEEIG 240
Query: 242 MTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGA 301
+N + + + + ++THG G D+ E TG + + E E + G +A A
Sbjct: 241 ADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVA 300
Query: 302 ANEAKVPLNFPAIALGRNLKGTIFGGI 328
+ VP + LK F GI
Sbjct: 301 VPQDPVPFKVYEWLV---LKNATFKGI 324
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 96/226 (42%), Gaps = 25/226 (11%)
Query: 70 VLGHEGVGMVESIGDEVKELKEGD-IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLM 128
+LGHE VG V +G EVK+ K GD +++P + R E ++ F H
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLE----------VQAGFQQH--- 102
Query: 129 PDGSSRMSIRGQKLYHIFTCSTMTEYM-VVDANYVVKVDP-SIDLSLAGFLSCGYSSGFG 186
S + G K + F EY V DA+ + + P + L A ++ ++GF
Sbjct: 103 ----SNGMLAGWKFSN-FKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFH 157
Query: 187 AAWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFI 246
A + +E + A+++GA +II + P D + +G TD +
Sbjct: 158 GA-ELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV 216
Query: 247 NPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLG 292
N D P I + +T G GVD G A +++ A++ K G
Sbjct: 217 NYKDGP---IESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG 259
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 106/287 (36%), Gaps = 30/287 (10%)
Query: 29 VEEIQVEPPKATEVRFKMLYASICHTDVL------SSKGFPLPLFPRVLGHEGVGMVESI 82
V +I P E+ K+ A +CH+D+ + + LPL LGHEGVG V +
Sbjct: 15 VVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPL---TLGHEGVGTVAEL 71
Query: 83 GDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKL 142
G+ V GD V C C C N C + G+ P G
Sbjct: 72 GEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADL--GITPPG----------- 118
Query: 143 YHIFTCSTMTEYMVVD-ANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKXXXXX 201
+ + +M EYM+VD A ++V + ++ A G + + +
Sbjct: 119 --LGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAV 176
Query: 202 XXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVK 261
+ R AA++I +D + R G + + ++ ++
Sbjct: 177 VIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAV----KSGAGAADAIR 232
Query: 262 EMTHGTGVDYGFECTGVASLISEALEATKL-GKGKVMAIGAANEAKV 307
E+T G G F+ G S I A + + G V+ I A AKV
Sbjct: 233 ELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKV 279
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 26/262 (9%)
Query: 70 VLGHEGVGMVESIGDEVKELKEGD-IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLM 128
+LGHE VG V +G EVK+ K GD +V+P + R E ++ + H
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSE----------VQRGYHQH--- 102
Query: 129 PDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPS-IDLSLAGFLSCGYSSGFGA 187
S + G K ++ + V DA+ + P I L A + ++GF
Sbjct: 103 ----SGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHG 158
Query: 188 AWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFIN 247
A + +E + A+++GA +II + P D + +G TD +N
Sbjct: 159 A-ELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVN 217
Query: 248 PDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKV 307
D P I + +T G GVD G A +++ A++ K G G + + E +V
Sbjct: 218 YKDGP---IESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GTIANVNYFGEGEV 273
Query: 308 PLNFPAIALGRNL-KGTIFGGI 328
L+ P + G + TI GG+
Sbjct: 274 -LDVPRLEWGCGMAHKTIKGGL 294
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 118/273 (43%), Gaps = 32/273 (11%)
Query: 28 KVEEIQVEPPKAT--EVRFKMLYASICHTDVLSSKGFPLPLFPR---VLGHEGVGMVESI 82
K+ I+ E P A + + L S C +D+ + F L R +LGHE VG V +
Sbjct: 11 KLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTV--FEGALGDRKNMILGHEAVGEVVEV 68
Query: 83 GDEVKELKEGD-IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQK 141
G EVK+ K GD +++P + R E ++ F H S + G K
Sbjct: 69 GSEVKDFKPGDRVIVPCTTPDWRSLE----------VQAGFQQH-------SNGMLAGWK 111
Query: 142 LYHIFTCSTMTEYM-VVDANYVVKVDP-SIDLSLAGFLSCGYSSGFGAAWKEFKVEKXXX 199
+ F EY V DA+ + + P + L A ++ ++GF A + +E
Sbjct: 112 FSN-FKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIEMGSS 169
Query: 200 XXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISEL 259
+ A+++GA +IIG+ P + + +G TD +N N I +
Sbjct: 170 VVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN---YKNGHIEDQ 226
Query: 260 VKEMTHGTGVDYGFECTGVASLISEALEATKLG 292
V ++T+G GVD G + +S+A++ K G
Sbjct: 227 VMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG 259
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 24 GEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPL---------FPRVLGHE 74
G+P K+E+I + PK ++V K+ A +CH+DV +G L P LGHE
Sbjct: 10 GKPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 75 GVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLC-------LKY--PFTF 124
G +E +GDEV +GD+V + + GE C C +LC + Y +
Sbjct: 70 IAGRIEEVGDEVVGYSKGDLVAVNPWEGEG-NCYYCRIGEEHLCDSPRWLGINYDGAYAE 128
Query: 125 HGLMPDGSSRMSIRGQKLYHI----FTCSTMTEYMVVDANYVVKVDPSIDLSLAG 175
+ L+P +R +L + TCS +T Y V +DPS L + G
Sbjct: 129 YVLVPHYKYLYKLR--RLSAVEAAPLTCSGVTTYRAVRK---ASLDPSKTLVVIG 178
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 23/225 (10%)
Query: 70 VLGHEGVGMVESIGDEVKELKEGD-IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLM 128
+LGHE VG V +G EVK+ K GD +V+P + R E ++ + H
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSE----------VQRGYHQH--- 102
Query: 129 PDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPS-IDLSLAGFLSCGYSSGFGA 187
S + G K ++ + V DA+ + P I L A + ++GF
Sbjct: 103 ----SGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHG 158
Query: 188 AWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFIN 247
A + +E + A+++GA +II + P D + +G TD +N
Sbjct: 159 A-ELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVN 217
Query: 248 PDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLG 292
D P I + +T G GVD G A +++ A++ K G
Sbjct: 218 YKDGP---IESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG 259
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 31 EIQVEPPKATEVRFKMLYASICHTDVLSSKGF-PLPLFPRVLGHEGVGMVESIGDEVKEL 89
E ++ P A EVR K+ A IC +D +G P +PRV+GHE G+++++G+ V+
Sbjct: 36 EREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESA 95
Query: 90 KEGDIVIPTFIGECRECENCTSEMANLC 117
+ G+ V + C C C+ N+C
Sbjct: 96 RVGERVAVDPVVSCGHCYPCSIGKPNVC 123
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 32/273 (11%)
Query: 28 KVEEIQVEPPKAT--EVRFKMLYASICHTDVLSSKGFPLPLFPR---VLGHEGVGMVESI 82
K+ I+ E P A + + L S C +D+ + F L R +LGHE VG V +
Sbjct: 11 KLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTV--FEGALGDRKNMILGHEAVGEVVEV 68
Query: 83 GDEVKELKEGD-IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQK 141
G EVK+ K GD +++P + R E ++ F H S + G K
Sbjct: 69 GSEVKDFKPGDRVIVPCTTPDWRSLE----------VQAGFQQH-------SNGMLAGWK 111
Query: 142 LYHIFTCSTMTEYM-VVDANYVVKVDP-SIDLSLAGFLSCGYSSGFGAAWKEFKVEKXXX 199
+ F EY V DA+ + + P + L A ++ ++GF A + ++
Sbjct: 112 FSN-FKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSS 169
Query: 200 XXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISEL 259
+ A+++GA +IIG+ P + + +G TD +N N I +
Sbjct: 170 VVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN---YKNGHIVDQ 226
Query: 260 VKEMTHGTGVDYGFECTGVASLISEALEATKLG 292
V ++T+G GVD G + +S+A+ K G
Sbjct: 227 VMKLTNGKGVDRVIMAGGGSETLSQAVSMVKPG 259
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Query: 70 VLGHEGVGMVESIGDEVKELKEGD-IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLM 128
+LGHE VG V +G EVK+ K GD +++P + R E + +P +G++
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLE--------VQAGFPQHSNGML 107
Query: 129 PDGSSRMSIRGQKLYHIFTCSTMTEYM-VVDANYVVKVDP-SIDLSLAGFLSCGYSSGFG 186
G K + F EY V DA+ + + P + L A ++ ++GF
Sbjct: 108 A---------GWKFSN-FKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFH 157
Query: 187 AAWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFI 246
A + ++ + A+++GA +IIG+ P + + +G TD +
Sbjct: 158 GA-ELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDIL 216
Query: 247 NPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLG 292
N N I + V ++T+G GVD G + +S+A+ K G
Sbjct: 217 N---YKNGHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVSMVKPG 259
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 23/225 (10%)
Query: 70 VLGHEGVGMVESIGDEVKELKEGD-IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLM 128
+LGHE VG V +G EVK+ K GD +V+P + R E ++ + H
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSE----------VQRGYHQH--- 102
Query: 129 PDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPS-IDLSLAGFLSCGYSSGFGA 187
S + G K ++ + V DA+ + P I L A + ++GF
Sbjct: 103 ----SGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHG 158
Query: 188 AWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFIN 247
A + +E + A+++GA +IIG+ P + + +G TD +N
Sbjct: 159 A-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN 217
Query: 248 PDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLG 292
N I + V ++T+G GVD G + +S+A++ K G
Sbjct: 218 ---YKNGHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG 259
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 23/225 (10%)
Query: 70 VLGHEGVGMVESIGDEVKELKEGD-IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLM 128
+LGHE VG V +G EVK+ K GD +V+P + R E ++ + H
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSE----------VQRGYHQH--- 102
Query: 129 PDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPS-IDLSLAGFLSCGYSSGFGA 187
S + G K ++ + V DA+ + P I L A + ++GF
Sbjct: 103 ----SGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHG 158
Query: 188 AWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFIN 247
A + ++ + A+++GA +IIG+ P + + +G TD +N
Sbjct: 159 A-ELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN 217
Query: 248 PDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLG 292
N I + V ++T+G GVD G + +S+A+ K G
Sbjct: 218 ---YKNGHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVSMVKPG 259
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 24 GEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPL---------FPRVLGHE 74
G+P ++EI V PK +V K+ A +CH+DV +G L P LGHE
Sbjct: 10 GKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 75 GVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLC 117
G +E +GDEV +GD+V + C C +LC
Sbjct: 70 IAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLC 112
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 24 GEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPL---------FPRVLGHE 74
G+P ++EI V PK +V K+ A +CH+DV +G L P LGHE
Sbjct: 10 GKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 75 GVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLC 117
G +E +GDEV +GD+V + + GE C C +LC
Sbjct: 70 IAGKIEEVGDEVVGYSKGDLVAVNPWQGEG-NCYYCRIGEEHLC 112
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 24 GEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPL---------FPRVLGHE 74
G+P ++EI V PK +V K+ A +CH+DV +G L P LGHE
Sbjct: 10 GKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 75 GVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLC 117
G +E +GDEV +GD+V + + GE C C +LC
Sbjct: 70 IAGKIEEVGDEVVGYSKGDLVAVNPWQGEG-NCYYCRIGEEHLC 112
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 24 GEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPL---------FPRVLGHE 74
G+P ++EI V PK +V K+ A +CH+DV +G L P LGHE
Sbjct: 10 GKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 75 GVGMVESIGDEVKELKEGDIV-IPTFIGECRECENCTSEMANLC 117
G +E +GDEV +GD+V + + GE C C +LC
Sbjct: 70 IAGKIEEVGDEVVGYSKGDLVAVNPWQGEG-NCYYCRIGEEHLC 112
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 2 NCYFHISFLKIYYAAAVVCWGEGEPWKVEEI---QVEPPKATEVRFKMLYASICHTDVLS 58
N YF ++ A+V G+P KV E+ ++ + ++VR KML A I +D+
Sbjct: 17 NLYFQSMPARVR---ALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINM 73
Query: 59 SKGF--PLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIG 101
+G LP P V G+EGV V ++G V LK GD VIP G
Sbjct: 74 IQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAG 118
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 123/320 (38%), Gaps = 74/320 (23%)
Query: 31 EIQVEPPKATEVRFKMLYASICHTDV--------LSSKGFPLPLFPRVLGHEGVGMVESI 82
E+ V P EV K+L SIC TD+ S+ P P++ GHE G V I
Sbjct: 20 EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKP----PQIXGHEVAGEVVEI 75
Query: 83 GDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQK 141
G V+ ++ GD V + T I C +C C ++C + K
Sbjct: 76 GPGVEGIEVGDYVSVETHI-VCGKCYACRRGQYHVC--------------------QNTK 114
Query: 142 LYHIFTCSTMTEYMVVDANYVVKVDPSI---------------DLSLAGFLSCGYSSGFG 186
++ + T EY VV A + K SI D LAG +S G
Sbjct: 115 IFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKSVLITG 174
Query: 187 AAWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFI 246
A + A+ GA +I + + R++ + G I
Sbjct: 175 AG------------------PLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVI 216
Query: 247 NPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK 306
NP +E + + V ++T G GVD E +G + + L+A G+V +G K
Sbjct: 217 NPFEE---DVVKEVXDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLG-LYPGK 271
Query: 307 VPLNFPAIALGRNLKGTIFG 326
V ++F + + + L TI+G
Sbjct: 272 VTIDFNNLIIFKAL--TIYG 289
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 123/320 (38%), Gaps = 74/320 (23%)
Query: 31 EIQVEPPKATEVRFKMLYASICHTDV--------LSSKGFPLPLFPRVLGHEGVGMVESI 82
E+ V P EV K+L SIC TD+ S+ P P++ GHE G V I
Sbjct: 21 EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKP----PQIXGHEVAGEVVEI 76
Query: 83 GDEVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQK 141
G V+ ++ GD V + T I C +C C ++C + K
Sbjct: 77 GPGVEGIEVGDYVSVETHI-VCGKCYACRRGQYHVC--------------------QNTK 115
Query: 142 LYHIFTCSTMTEYMVVDANYVVKVDPSI---------------DLSLAGFLSCGYSSGFG 186
++ + T EY VV A + K SI D LAG +S G
Sbjct: 116 IFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKSVLITG 175
Query: 187 AAWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFI 246
A + A+ GA +I + + R++ + G I
Sbjct: 176 AG------------------PLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVI 217
Query: 247 NPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK 306
NP +E + + V ++T G GVD E +G + + L+A G+V +G K
Sbjct: 218 NPFEE---DVVKEVXDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLG-LYPGK 272
Query: 307 VPLNFPAIALGRNLKGTIFG 326
V ++F + + + L TI+G
Sbjct: 273 VTIDFNNLIIFKAL--TIYG 290
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 17 AVVCWGEGEPWKVEEI---QVEPPKATEVRFKMLYASICHTDVLSSKGF--PLPLFPRVL 71
A+V G+P KV E+ ++ + ++VR KML A I +D+ +G LP P V
Sbjct: 16 ALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVG 75
Query: 72 GHEGVGMVESIGDEVKELKEGDIVIPTFIG 101
G+EGV V ++G V LK GD VIP G
Sbjct: 76 GNEGVAQVVAVGSNVTGLKPGDWVIPANAG 105
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 25 EPWKVEEIQVEPPKATEVRFKMLYASICHTDVL------SSKGFPLPLFPRVLGHEGVGM 78
EP +E++ + P+ EV ++ A +C TD+ + +GF LP+ +LGHE G
Sbjct: 14 EPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPI---ILGHENAGT 70
Query: 79 VESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLC 117
+ +G E+ ++K+GD V+ C C N+C
Sbjct: 71 IVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNIC 108
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 115/322 (35%), Gaps = 53/322 (16%)
Query: 19 VCWGEGEPWKVEEIQVEP------PKATEVRFKMLYASICHTDVLSSKG-------FP-L 64
+ W + W+ E++VE K TE+ K+ IC +DV ++ +P L
Sbjct: 29 LTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHXAQTDEEGYILYPGL 88
Query: 65 PLFPRVLGHEGVGMVESIGDEV------KELKEGDIVIPTFIGECRECENCTSEMANLCL 118
FP LGHE G+V G E K + G+ V C C C N C
Sbjct: 89 TGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCE 148
Query: 119 KYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVK------VDPSIDLS 172
G DG+ EY+ VDA Y V L
Sbjct: 149 N--LNELGFNVDGA------------------FAEYVKVDAKYAWSLRELEGVYEGDRLF 188
Query: 173 LAGFLSCGYSSGFGAAW-KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNP 231
LAG L S + A + + + + GA+K+I + +
Sbjct: 189 LAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSE 248
Query: 232 CRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEAT-- 289
R++ + G I+P E + E V + T+G G E TGV L+ +E
Sbjct: 249 VRRNLAKELGADHVIDPTKE---NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIW 305
Query: 290 -KLGKGKVMAIGAANEAKVPLN 310
G +AI A +AK+PL
Sbjct: 306 RARGINATVAIVARADAKIPLT 327
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 24 GEPWKVEEIQVEP----PKATEVRFKMLYASICHTDVLSSKGFPLPLFPRVLGHEGVGMV 79
G P +E + EP P+A VR K + + T S +P P P LG EG G+V
Sbjct: 11 GGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDT-YYRSGLYPAPFLPSGLGAEGAGVV 69
Query: 80 ESIGDEVKELKEGDIV 95
E++GDEV K GD V
Sbjct: 70 EAVGDEVTRFKVGDRV 85
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 116/306 (37%), Gaps = 52/306 (16%)
Query: 25 EPWKVEEIQVEPPKATEVRFKMLY----ASICHTDVLSSKG----FPLPLFPRVLGHEGV 76
+P ++E+ V+ P+ E RF ++ A +CHTD+ +G P P LGHE V
Sbjct: 26 KPLRIED--VDYPR-LEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENV 82
Query: 77 GMVESIGDEVKELKEGDIVI--PTFI-GECRECENCTSEMANLCLKYPFTFHGLMPDGSS 133
G +E + + V+ L++GD VI P G C C +M L++P GL DG
Sbjct: 83 GYIEEVAEGVEGLEKGDPVILHPAVTDGTCLAC-RAGEDMHCENLEFP----GLNIDGG- 136
Query: 134 RMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID----LSLAGFLSCGYSSGFGAAW 189
E+M V+K+ I + +A G ++
Sbjct: 137 -----------------FAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKK 179
Query: 190 KEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249
+ + ++ A +I +D + E G ++
Sbjct: 180 AARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR 239
Query: 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGK-GKVMAIGAANEAKVP 308
+P K + EL T G GV+ + G + + LG+ G+++ +G E
Sbjct: 240 RDPVKQVMEL----TRGRGVNVAMDFVGSQATVDYT--PYLLGRMGRLIIVGYGGE---- 289
Query: 309 LNFPAI 314
L FP I
Sbjct: 290 LRFPTI 295
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 117/300 (39%), Gaps = 33/300 (11%)
Query: 17 AVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLF----PRVLG 72
++V G G+ ++E + P EV KM IC +DV + + F P VLG
Sbjct: 9 SLVVHGPGD-LRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLG 67
Query: 73 HEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMP--D 130
HE G V +G V+ L+ GD V + E C NL P F P D
Sbjct: 68 HEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLS---PTIFFCATPPDD 124
Query: 131 GSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWK 190
G+ + + +AN+ K+ ++ G L S G A +
Sbjct: 125 GN------------------LCRFYKHNANFCYKLPDNVTFE-EGALIEPLSVGIHAC-R 164
Query: 191 EFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD 250
V + A+ GAA+++ D + R K + G + +
Sbjct: 165 RAGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISN 224
Query: 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPL 309
E + I++ V+ + G+ + ECTGV + I + AT G G ++ +G +E VPL
Sbjct: 225 ESPEEIAKKVEGLL-GSKPEVTIECTGVETSIQAGIYATHSG-GTLVLVGLGSEMTSVPL 282
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 22 GEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRVLGHEGVGMVES 81
+G +K + + PK E+ K+ S+ D + + PRVLG + +G+VES
Sbjct: 15 SDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDT-KQRLMDVSKAPRVLGFDAIGVVES 73
Query: 82 IGDEVKELKEGDIV 95
+G+EV +GDIV
Sbjct: 74 VGNEVTMFNQGDIV 87
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 113/295 (38%), Gaps = 73/295 (24%)
Query: 31 EIQVEPPKATEVRFKMLYASICHTDV--------LSSKGFPLPLFPRVLGHEGVGMVESI 82
E+ V P EV K+L SIC TD+ S+ P P+++GHE G V +
Sbjct: 21 EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKP----PQIMGHEVAGEVVEV 76
Query: 83 GDEVKELKEGD-IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQK 141
G V++L+ GD I + T I C +C C ++C + K
Sbjct: 77 GPGVEDLQVGDYISVETHI-VCGKCYACKHNRYHVC--------------------QNTK 115
Query: 142 LYHIFTCSTMTEYMVVDAN------------YVVKVDP---SIDLSLAGFLSCGYSSGFG 186
++ + Y +V A Y +P ++D LAG ++ + G
Sbjct: 116 IFGVDMDGVFAHYAIVPAKNAWKNPKDMPPEYAALQEPLGNAVDTVLAGPIAGRSTLITG 175
Query: 187 AAWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFI 246
A + A+ GA +I + + R+ + G +
Sbjct: 176 AG------------------PLGLLGIAVAKASGAYPVIVSEPSEFRRKLAKKVGADYVV 217
Query: 247 NP-DDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIG 300
NP +++P K V ++T G GV+ E +G + + L+A G G+V +G
Sbjct: 218 NPFEEDPVK----FVMDITDGAGVEVFLEFSGAPKALEQGLKAVTPG-GRVSLLG 267
>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase
pdb|1KOL|B Chain B, Crystal Structure Of Formaldehyde Dehydrogenase
Length = 398
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 12/110 (10%)
Query: 18 VVCWGEGEPWKVEEIQVEPPKATEVR---------FKMLYASICHTDVLSSKGFPLPLFP 68
VV G G KVE +++ PK + R K++ +IC +D +G
Sbjct: 6 VVYLGSG---KVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVG 62
Query: 69 RVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCL 118
VLGHE G V G +V+ L+ GD+V F C C +C +CL
Sbjct: 63 LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCL 112
>pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant
From Haloferax Mediterranei
Length = 357
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 16 AAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTD--VLS--SKGFPLPLFPRVL 71
A V GE P +E+ + EP ++ E + L +C TD V++ GFP VL
Sbjct: 3 AIAVKRGEDRPVVIEKPRPEP-ESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVL 61
Query: 72 GHEGVGMVESIGDEVKELKEGDIVIPT 98
GHE VG+V D EL+EGDIV+PT
Sbjct: 62 GHEAVGVVVDPND--TELEEGDIVVPT 86
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%)
Query: 30 EEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRVLGHEGVGMVESIGDEVKEL 89
E + E EVR K+ + +C +D+ +P LGHE G ++++G V +L
Sbjct: 16 ESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDL 75
Query: 90 KEGDIVIPTFIGECRECENCTSEMANLCLKYPF 122
GD V + C C C + C KY F
Sbjct: 76 HPGDAVACVPLLPCFTCPECLKGFYSQCAKYDF 108
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 17 AVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDV----LSSKGFPLPLFPRVLG 72
++V G G+ ++E + P EV +M IC +DV G + P VLG
Sbjct: 10 SLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLG 68
Query: 73 HEGVGMVESIGDEVKELKEGDIV 95
HE G VE +G VK LK GD V
Sbjct: 69 HEASGTVEKVGSSVKHLKPGDRV 91
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 216 ARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFEC 275
A+ GAA+++ D + R K + G + E + I+ V E G + EC
Sbjct: 191 AKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKV-EGQLGCKPEVTIEC 249
Query: 276 TGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAI 314
TG + I + AT+ G G ++ +G +E VPL AI
Sbjct: 250 TGAEASIQAGIYATRSG-GTLVLVGLGSEMTTVPLLHAAI 288
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 103/273 (37%), Gaps = 36/273 (13%)
Query: 34 VEPPKATEVRFKMLYASICHTDV------LSSKGFPLPLFPRVLGHEGVGMVESIGDEVK 87
V P E+ ++ ASIC TD+ ++G P P V GHE G+VE++G V+
Sbjct: 20 VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRP--PLVTGHEFSGVVEAVGPGVR 77
Query: 88 ELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFT 147
+ GD V C C C + ++CL G+ DG
Sbjct: 78 RPQVGDHVSLESHIVCHACPACRTGNYHVCLNT--QILGVDRDGG--------------- 120
Query: 148 CSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXX 207
EY+VV A + +A L + + + V
Sbjct: 121 ---FAEYVVVPAENAWVNPKDLPFEVAAILEP-FGNAVHTVYAGSGVSGKSVLITGAGPI 176
Query: 208 XXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGT 267
M R GA I+ D NP R + +NP +E + E+V+ +T G+
Sbjct: 177 GLMAAM-VVRASGAGPILVSDPNPYRLAFARPYA-DRLVNPLEE---DLLEVVRRVT-GS 230
Query: 268 GVDYGFECTGVASLISEALEA-TKLGKGKVMAI 299
GV+ E +G + I + L A G+ +++ I
Sbjct: 231 GVEVLLEFSGNEAAIHQGLMALIPGGEARILGI 263
>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CD9|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CDA|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
pdb|2CDA|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
Length = 366
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 28/137 (20%)
Query: 41 EVRFKMLYASICHTDVLSSKG-FPLPLFPR-----VLGHEGVGMVESIGDEVKELKEGDI 94
+++ + +Y IC TD G L P+ VLGHE +G+VE + +GD+
Sbjct: 28 KIKIRTIYNGICGTDREIVNGKLTLSTLPKGKDFLVLGHEAIGVVE---ESYHGFSQGDL 84
Query: 95 VIPTFIGECRECENCTSEMANLCLKYPFTFHGLMP-DGSSRMSIRGQKLYHIFTCSTMTE 153
V+P C C NC + C F G+ DG M E
Sbjct: 85 VMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGF------------------MRE 126
Query: 154 YMVVDANYVVKVDPSID 170
+ D Y+VK+ SI+
Sbjct: 127 WWYDDPKYLVKIPKSIE 143
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 17 AVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDV----LSSKGFPLPLFPRVLG 72
++V G G+ ++E + P EV + IC +DV G + P VLG
Sbjct: 10 SLVVHGPGD-LRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVLG 68
Query: 73 HEGVGMVESIGDEVKELKEGDIV 95
HE G VE +G VK LK GD V
Sbjct: 69 HEASGTVEKVGSSVKHLKPGDRV 91
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 216 ARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFEC 275
A+ GAA+++ D + R K + G + E + I+ V E G + EC
Sbjct: 191 AKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKV-EGQLGCKPEVTIEC 249
Query: 276 TGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAI 314
TG + I + AT+ G G ++ +G +E VPL AI
Sbjct: 250 TGAEASIQAGIYATRSG-GTLVLVGLGSEXTTVPLLHAAI 288
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase
From Bacillus Thuringiensis
Length = 340
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 28 KVEEIQVEPPKATEVRFKMLYASICHTDVLSSKG-----FPLPLFPRVLGHEGVGMVESI 82
+VE +EP K EV +ML I +D++ G PLP P G+EGVG+VE++
Sbjct: 21 QVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIP---GYEGVGIVENV 77
Query: 83 GDEVKELKEGDIVIP 97
G V G V+P
Sbjct: 78 GAFVSRELIGKRVLP 92
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 94/279 (33%), Gaps = 36/279 (12%)
Query: 28 KVEEIQVEPPKATEVRFKMLYASICHTDVLSSKG-FPLPLFPRVLGHEGVGMVESIGDEV 86
V + + P ++ K+ IC TD G FP P LGHE G+V G V
Sbjct: 36 SVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP-STPPVTLGHEFCGIVVEAGSAV 94
Query: 87 KELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIF 146
+++ G + C C C + NLC R + I
Sbjct: 95 RDIAPGARITGDPNISCGRCPQCQAGRVNLC--------------------RNLRAIGIH 134
Query: 147 TCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXX 206
EY++V ++ ++D F G K
Sbjct: 135 RDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVI 194
Query: 207 XXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHG 266
+ AR+ GA +I + ++ E G T ++P S ++V+ +
Sbjct: 195 GLLTVQL--ARLAGATTVILSTRQATKRRLAEEVGATATVDP------SAGDVVEAIAGP 246
Query: 267 T-----GVDYGFECTGVASLISEALEATKLGKGKVMAIG 300
GVD EC GVA + ++ K G G V+ +G
Sbjct: 247 VGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILG 284
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 42 VRFKMLYASICHTDVLSSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIG 101
V K++ +IC +D +G + VLGHE G V G +V+ + GD+V F
Sbjct: 35 VILKVVSTNICGSDQHIYRGRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNV 94
Query: 102 ECRECENCTSEMANLC 117
C C NC +++C
Sbjct: 95 ACGRCRNCKEARSDVC 110
>pdb|2B5V|A Chain A, Crystal Structure Of Glucose Dehydrogenase From
Haloferax Mediterranei
pdb|2VWG|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp, Zn And Gluconolactone.
pdb|2VWH|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp, Zn And Glucose.
pdb|2VWP|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadph And Zn.
pdb|2VWQ|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp And Zn
Length = 357
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 16 AAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTD--VLS--SKGFPLPLFPRVL 71
A V GE P +E+ + EP ++ E + L + TD V++ GFP VL
Sbjct: 3 AIAVKRGEDRPVVIEKPRPEP-ESGEALVRTLRVGVDGTDHEVIAGGHGGFPEGEDHLVL 61
Query: 72 GHEGVGMVESIGDEVKELKEGDIVIPT 98
GHE VG+V D EL+EGDIV+PT
Sbjct: 62 GHEAVGVVVDPND--TELEEGDIVVPT 86
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 19/162 (11%)
Query: 25 EPWKVEEIQVEPPKA---TEVRFKMLYASICHTDVLSSKGFPLPL-FPRVLGHEGVGMVE 80
E WK + PK ++ K+ +C +D+ + G + P V+GHE VG V
Sbjct: 16 EDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVV 75
Query: 81 SIGDEVKE-LKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIR 138
+G + LK G V + + C EC+ C ++ C K+ T+ DG
Sbjct: 76 KLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDG------- 128
Query: 139 GQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCG 180
+ Y+ V ++VV + +I LA L CG
Sbjct: 129 ------YVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCG 164
>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDC|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
Length = 366
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 54/137 (39%), Gaps = 28/137 (20%)
Query: 41 EVRFKMLYASICHTDVLSSKG-FPLPLFPR-----VLGHEGVGMVESIGDEVKELKEGDI 94
+++ + +Y IC D G L P+ VLGHE +G+VE + +GD+
Sbjct: 28 KIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVE---ESYHGFSQGDL 84
Query: 95 VIPTFIGECRECENCTSEMANLCLKYPFTFHGLMP-DGSSRMSIRGQKLYHIFTCSTMTE 153
V+P C C NC + C F G+ DG M E
Sbjct: 85 VMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDG------------------FMRE 126
Query: 154 YMVVDANYVVKVDPSID 170
+ D Y+VK+ SI+
Sbjct: 127 WWYDDPKYLVKIPKSIE 143
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 102/270 (37%), Gaps = 42/270 (15%)
Query: 70 VLGHEGVGMVESIGDEVKELKEGD-IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLM 128
+LGHE VG + +G VK LK GD +++P + E E+ YP G++
Sbjct: 56 ILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRG--------YPMHSGGML 107
Query: 129 PDGSSRMSIRGQKLYHIFTCSTMTEYMVV---DANYVV---KVDPSIDLSLAGFLSCGYS 182
G + F +E V DAN + + P + L+ ++ G+
Sbjct: 108 ----------GGWKFSNFKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGF- 156
Query: 183 SGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKI--IGIDKNPCRKDKGEAF 240
GA K+ A GA +I +G K+ C D +
Sbjct: 157 --HGAELANIKLGDTVCVIGIGPVGLMSVA--GANHLGAGRIFAVGSRKHCC--DIALEY 210
Query: 241 GMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGK--GKVMA 298
G TD IN N I E + + T G GVD G ++A++ K G G V
Sbjct: 211 GATDIIN---YKNGDIVEQILKATDGKGVDKVVIAGGXVHTFAQAVKMIKPGSDIGNVNY 267
Query: 299 IGAANEAKVPLNFPAIALGRNLKGTIFGGI 328
+G + +P + + +G I GG+
Sbjct: 268 LGEGDNIDIPRSEWGVGMGHK---HIHGGL 294
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 100/264 (37%), Gaps = 30/264 (11%)
Query: 70 VLGHEGVGMVESIGDEVKELKEGD-IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLM 128
+LGHE VG V +G EVK+ K GD +V+P + R TSE+ ++
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWR-----TSEVQRGYHQH-------- 102
Query: 129 PDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPS-IDLSLAGFLSCGYSSGF-G 186
S + G K ++ + V DA+ + P I L A + ++GF G
Sbjct: 103 ----SGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHG 158
Query: 187 AAWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFI 246
A K+ A GA +I + D +G TD I
Sbjct: 159 AELANIKLGDTVCVIGIGPVGLMSVA--GANHLGAGRIFAVGSRKHCCDIALEYGATDII 216
Query: 247 NPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGK--GKVMAIGAANE 304
N N I E + + T G GVD G ++A++ K G G V +G +
Sbjct: 217 N---YKNGDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDN 273
Query: 305 AKVPLNFPAIALGRNLKGTIFGGI 328
+P + + +G I GG+
Sbjct: 274 IDIPRSEWGVGMGHK---HIHGGL 294
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 70/173 (40%), Gaps = 26/173 (15%)
Query: 24 GEPWKVEEIQVEP--PKATEVRFKMLYASICHTDVLSSKG-FPLPLFPRVLGHEGVGMVE 80
G P ++ ++ P P E++ + I D G +P P P LG E G+V
Sbjct: 11 GGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVS 70
Query: 81 SIGDEVKELKEGDIVI--PTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIR 138
+G VK +K GD V+ + +G N ++ A + L +F + ++ ++
Sbjct: 71 KVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAI-LPAAISF-----EQAAASFLK 124
Query: 139 GQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLA----GFLSCGYSSGFGA 187
G +T Y ++ Y +K D A G ++C ++ GA
Sbjct: 125 G-----------LTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA 166
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 102/270 (37%), Gaps = 42/270 (15%)
Query: 70 VLGHEGVGMVESIGDEVKELKEGD-IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLM 128
+LGHE VG + +G VK LK GD +++P + E E+ YP G++
Sbjct: 56 ILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRG--------YPMHSGGML 107
Query: 129 PDGSSRMSIRGQKLYHIFTCSTMTEYMVV---DANYVV---KVDPSIDLSLAGFLSCGYS 182
G + F +E V DAN + + P + L+ ++ G+
Sbjct: 108 ----------GGWKFSNFKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGF- 156
Query: 183 SGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDRARIQGAAKI--IGIDKNPCRKDKGEAF 240
GA K+ A GA +I +G K+ C D +
Sbjct: 157 --HGAELANIKLGDTVCVIGIGPVGLMSVA--GANHLGAGRIFAVGSRKHCC--DIALEY 210
Query: 241 GMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGK--GKVMA 298
G TD IN N I E + + T G GVD G ++A++ K G G V
Sbjct: 211 GATDIIN---YKNGDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNY 267
Query: 299 IGAANEAKVPLNFPAIALGRNLKGTIFGGI 328
+G + +P + + +G I GG+
Sbjct: 268 LGEGDNIPIPRSEWGVGMGHK---HIHGGL 294
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 39/91 (42%), Gaps = 8/91 (8%)
Query: 38 KATEVRFKMLYASICHTDV-LSSKGFPLPLF---PRVLGHEGVGMVESIGDEVKELKEGD 93
K EV + IC +DV G P+ VLGHE G V ++ VK +K GD
Sbjct: 39 KEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGD 98
Query: 94 IVI--PTFIGECRECENCTSEMANLCLKYPF 122
V P I C CE C + N C + F
Sbjct: 99 RVAIEPQVI--CNACEPCLTGRYNGCERVDF 127
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 272 GFECTGVASLISEALEATKLGKGKVMAIGAA-NEAKVPL 309
ECTGV S I+ A+ A K G GKV IG NE ++P
Sbjct: 256 ALECTGVESSIAAAIWAVKFG-GKVFVIGVGKNEIQIPF 293
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 104/272 (38%), Gaps = 41/272 (15%)
Query: 37 PKATE--VRFKMLYASICHTDVL---SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKE 91
P+A E + + L S+ + D L + G L FP V + G+VE++G V +
Sbjct: 49 PEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLA-FPFVPASDXSGVVEAVGKSVTRFRP 107
Query: 92 GDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCS-- 149
GD VI TF P GL P G+ R Y +
Sbjct: 108 GDRVISTFA--------------------PGWLDGLRP-GTGRTPA-----YETLGGAHP 141
Query: 150 -TMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXX 208
++EY+V+ + V S+D + A L C + + A ++ +
Sbjct: 142 GVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGV 201
Query: 209 XXXXMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTG 268
+ A+ G A++I + + D+ A G IN +E E V +T G
Sbjct: 202 ALFGLQIAKATG-AEVIVTSSSREKLDRAFALGADHGINRLEE---DWVERVYALTGDRG 257
Query: 269 VDYGFECTGVASLISEALEATKLGKGKVMAIG 300
D+ E G A L ++L+A G++ IG
Sbjct: 258 ADHILEIAGGAGL-GQSLKAVA-PDGRISVIG 287
>pdb|1QU5|A Chain A, Nmr Structure Of A New Phosphotyrosine Binding Domain
Containing The Fha2 Domain Of Rad 53
Length = 182
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 16/128 (12%)
Query: 41 EVRFKMLYASICHTDVLSSK----GFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVI 96
E R + L S +V SSK G L L P + +SI E E+++G V
Sbjct: 3 ETREQKLLHSNNTENVKSSKKKGNGRFLTLKP---------LPDSIIQESLEIQQG--VN 51
Query: 97 PTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMV 156
P FIG +C NC E L + F F G S Q L I+ C T T
Sbjct: 52 PFFIGRSEDC-NCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHTGTNVSY 110
Query: 157 VDANYVVK 164
++ N +++
Sbjct: 111 LNNNRMIQ 118
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 30 EEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLF----PRVLGHEGVGMVESIGDE 85
EE++V P +VR + + D G P PL P V+G E +VE +G
Sbjct: 19 EEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPG 78
Query: 86 VKELKEGDIV 95
V + G+ V
Sbjct: 79 VTDFTVGERV 88
>pdb|1DMZ|A Chain A, A Refined Nmr Structure Of A New Phophopeptide-Binding
Domain Containing The Fha2 Of Rad53
pdb|1FHQ|A Chain A, Refined Solution Structure Of The Fha2 Domain Of Rad53
pdb|1FHR|A Chain A, Solution Structure Of The Fha2 Domain Of Rad53 Complexed
With A Phosphotyrosyl Peptide
pdb|1J4K|A Chain A, Solution Structure Of The Fha2 Domain Of Rad53 Complexed
With A Phosphotyrosyl Peptide Derived From Rad9
pdb|1J4L|A Chain A, Solution Structure Of The Fha2 Domain Of Rad53 Complexed
With A Phosphothreonyl Peptide Derived From Rad9
pdb|1K2M|A Chain A, Solution Structure Of The Fha2 Domain Of Rad53 Complexed
With A Phosphotyrosyl Peptide Derived From Rad9
pdb|1K2N|A Chain A, Solution Structure Of The Fha2 Domain Of Rad53 Complexed
With A Phosphothreonyl Peptide Derived From Rad9
Length = 158
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 80 ESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRG 139
+SI E E+++G V P FIG +C NC E L + F F G S
Sbjct: 13 DSIIQESLEIQQG--VNPFFIGRSEDC-NCKIEDNRLSRVHCFIFKKRHAVGKSMYESPA 69
Query: 140 QKLYHIFTCSTMTEYMVVDANYVVK 164
Q L I+ C T T ++ N +++
Sbjct: 70 QGLDDIWYCHTGTNVSYLNNNRMIQ 94
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 2 NCYFH--ISFLKIYYAAAVVCWGEGEPWKVE-EIQVEPPKATEVRFKMLYASI--CHTDV 56
N YF + K+ A V +G E K+ +I V PK +V K+ + T +
Sbjct: 17 NLYFQSMATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYI 76
Query: 57 LSSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPT 98
S PL P G + G++E++GD K+GD V +
Sbjct: 77 RSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTS 118
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 116/294 (39%), Gaps = 30/294 (10%)
Query: 41 EVRFKMLYASICHTDVLSSKG-FPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTF 99
+V +++ ICHTD+ +K + +P V GHE VG V +G +V + GDIV
Sbjct: 36 DVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGC 95
Query: 100 IGECRECEN-CTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVD 158
+ C + C ++ C K ++++ + I GQ F +T VV
Sbjct: 96 LVGCCGGCSPCERDLEQYCPKKIWSYNDVY--------INGQPTQGGFAKAT-----VVH 142
Query: 159 ANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKXXXXXXXXXXXXXXXXMDRARI 218
+VVK+ + + A L C + + + + A+
Sbjct: 143 QKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKA 202
Query: 219 QGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGV 278
G + N R++ + G D++ D+ +SEL + DY + V
Sbjct: 203 MGHHVTVISSSNKKREEALQDLGADDYVIGSDQ--AKMSELADSL------DYVIDTVPV 254
Query: 279 ASLISEALEATKLGKGKVMAIGAANEAKVPLNF--PAIALGRN-LKGTIFGGIK 329
+ L KL GK++ +G N PL F P + LGR + G+ G +K
Sbjct: 255 HHALEPYLSLLKL-DGKLILMGVINN---PLQFLTPLLMLGRKVITGSFIGSMK 304
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 21/91 (23%)
Query: 23 EGEPWKVEEIQ---------VEPPKAT------EVRFKMLYASICHTDVLSSKGFPLPLF 67
+G W++E + V+ P AT EVR M A + D L + G ++
Sbjct: 207 DGTGWRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALG----MY 262
Query: 68 PRV--LGHEGVGMVESIGDEVKELKEGDIVI 96
P V LG EG G+V G V L GD V+
Sbjct: 263 PGVASLGSEGAGVVVETGPGVTGLAPGDRVM 293
>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|C Chain C, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|F Chain F, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 20/113 (17%)
Query: 6 HISFLKIYYAAAVVCWGEGEPWKVE-----EIQVEPPKATEVRFKMLYASICHTDVLSSK 60
H F + A AV+ GEP V EI + EV K L + I +D+ +
Sbjct: 17 HNQFRTMITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQ 76
Query: 61 G-FPL------------PLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFI 100
G +P P P G+EG+ V +G V L+ GD VIP+ +
Sbjct: 77 GVYPSKPAKTTGFGTAEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVIPSHV 127
>pdb|4EU1|A Chain A, Structure Of A Mitochondrial Aspartate Aminotransferase
From Trypanosoma Brucei
pdb|4EU1|B Chain B, Structure Of A Mitochondrial Aspartate Aminotransferase
From Trypanosoma Brucei
Length = 409
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 249 DDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEA 285
DD + E VK+ T GT +DY TG+AS + EA
Sbjct: 53 DDADQPFVLECVKQATLGTNMDYA-PVTGIASFVEEA 88
>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|D Chain D, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|E Chain E, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 20/113 (17%)
Query: 6 HISFLKIYYAAAVVCWGEGEPWKVE-----EIQVEPPKATEVRFKMLYASICHTDVLSSK 60
H F + A AV+ GEP V EI + EV K L + + +D+ +
Sbjct: 17 HNQFRTMITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQ 76
Query: 61 G-FPL------------PLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFI 100
G +P P P G+EG+ V +G V L+ GD VIP+ +
Sbjct: 77 GVYPSKPAKTTGFGTTEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVIPSHV 127
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 37 PKATEVRFKMLYASICHTDVLSSKGF--PLPLFPRVLGHEGVGMVESIGDEVKELKEGDI 94
P+ E++ ++ + D++ +G P P V G E G+VE++GD VK + GD
Sbjct: 28 PQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDR 87
Query: 95 VI 96
V+
Sbjct: 88 VM 89
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,618,094
Number of Sequences: 62578
Number of extensions: 382021
Number of successful extensions: 1215
Number of sequences better than 100.0: 103
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 929
Number of HSP's gapped (non-prelim): 126
length of query: 332
length of database: 14,973,337
effective HSP length: 99
effective length of query: 233
effective length of database: 8,778,115
effective search space: 2045300795
effective search space used: 2045300795
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)