Query 043260
Match_columns 332
No_of_seqs 134 out of 1177
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 03:06:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043260.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043260hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 2.7E-61 5.9E-66 440.2 29.0 286 12-329 1-290 (339)
2 COG1062 AdhC Zn-dependent alco 100.0 3E-58 6.4E-63 412.2 30.0 314 13-332 1-318 (366)
3 KOG0022 Alcohol dehydrogenase, 100.0 5.2E-56 1.1E-60 391.7 30.3 320 10-331 3-326 (375)
4 KOG0023 Alcohol dehydrogenase, 100.0 4.5E-54 9.8E-59 381.2 25.1 300 8-330 3-309 (360)
5 KOG0024 Sorbitol dehydrogenase 100.0 1.2E-52 2.7E-57 373.0 26.5 293 12-328 2-301 (354)
6 cd08281 liver_ADH_like1 Zinc-d 100.0 1.7E-48 3.7E-53 370.3 34.1 308 15-328 1-320 (371)
7 PLN02740 Alcohol dehydrogenase 100.0 1.5E-48 3.2E-53 372.1 33.1 318 8-329 4-330 (381)
8 TIGR02818 adh_III_F_hyde S-(hy 100.0 3E-48 6.6E-53 368.3 33.6 311 15-327 2-315 (368)
9 cd08301 alcohol_DH_plants Plan 100.0 1.9E-47 4.1E-52 362.9 34.9 315 13-329 1-319 (369)
10 cd08300 alcohol_DH_class_III c 100.0 2.5E-47 5.5E-52 361.9 34.5 314 13-328 1-317 (368)
11 cd08277 liver_alcohol_DH_like 100.0 2.8E-47 6E-52 361.3 33.6 314 13-329 1-315 (365)
12 TIGR03451 mycoS_dep_FDH mycoth 100.0 3.9E-47 8.4E-52 359.4 32.7 300 14-326 1-304 (358)
13 cd08239 THR_DH_like L-threonin 100.0 5.8E-47 1.3E-51 355.3 32.6 285 15-327 1-289 (339)
14 PLN02827 Alcohol dehydrogenase 100.0 1.3E-46 2.8E-51 358.2 33.3 317 6-328 4-324 (378)
15 COG1063 Tdh Threonine dehydrog 100.0 1.9E-46 4.1E-51 352.8 30.5 290 15-325 1-295 (350)
16 PRK09880 L-idonate 5-dehydroge 100.0 1.8E-45 3.8E-50 346.1 31.1 285 13-326 3-292 (343)
17 PLN02586 probable cinnamyl alc 100.0 5.4E-45 1.2E-49 344.9 31.4 295 9-327 7-305 (360)
18 COG0604 Qor NADPH:quinone redu 100.0 5E-45 1.1E-49 339.3 28.6 264 15-328 1-271 (326)
19 TIGR02819 fdhA_non_GSH formald 100.0 6.2E-45 1.3E-49 347.8 27.9 269 14-303 2-302 (393)
20 TIGR03201 dearomat_had 6-hydro 100.0 8E-44 1.7E-48 335.6 30.8 285 18-327 2-299 (349)
21 PLN02178 cinnamyl-alcohol dehy 100.0 1.6E-43 3.6E-48 336.3 31.5 292 13-328 3-301 (375)
22 cd08230 glucose_DH Glucose deh 100.0 1.9E-43 4.1E-48 333.8 29.9 283 15-327 1-302 (355)
23 PRK10309 galactitol-1-phosphat 100.0 3.3E-43 7.1E-48 331.0 31.1 282 15-326 1-289 (347)
24 cd08299 alcohol_DH_class_I_II_ 100.0 1.1E-42 2.3E-47 330.8 34.7 315 11-329 4-322 (373)
25 TIGR02822 adh_fam_2 zinc-bindi 100.0 3.6E-43 7.8E-48 328.6 30.0 274 18-327 2-282 (329)
26 cd08231 MDR_TM0436_like Hypoth 100.0 2.6E-42 5.6E-47 326.5 33.0 299 16-328 2-310 (361)
27 PLN02514 cinnamyl-alcohol dehy 100.0 2.7E-42 5.8E-47 326.2 31.9 292 13-328 8-303 (357)
28 cd08233 butanediol_DH_like (2R 100.0 6.9E-42 1.5E-46 322.5 32.5 286 15-327 1-299 (351)
29 cd05279 Zn_ADH1 Liver alcohol 100.0 2E-41 4.2E-46 321.3 33.8 308 15-328 1-314 (365)
30 cd08278 benzyl_alcohol_DH Benz 100.0 2.6E-41 5.6E-46 320.5 34.0 307 13-326 1-313 (365)
31 cd08237 ribitol-5-phosphate_DH 100.0 8.1E-42 1.8E-46 321.0 27.9 271 13-327 1-283 (341)
32 cd08296 CAD_like Cinnamyl alco 100.0 9E-41 1.9E-45 312.8 31.6 282 15-326 1-285 (333)
33 cd08279 Zn_ADH_class_III Class 100.0 2.6E-40 5.7E-45 313.2 33.6 308 15-327 1-311 (363)
34 PRK10083 putative oxidoreducta 100.0 7.3E-40 1.6E-44 306.9 31.6 281 15-325 1-284 (339)
35 KOG1197 Predicted quinone oxid 100.0 5.9E-41 1.3E-45 288.2 21.7 253 9-314 3-259 (336)
36 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1E-39 2.2E-44 307.5 32.4 287 15-327 1-302 (350)
37 cd08285 NADP_ADH NADP(H)-depen 100.0 1E-39 2.2E-44 307.7 32.3 288 15-325 1-295 (351)
38 cd05284 arabinose_DH_like D-ar 100.0 2.3E-39 5E-44 303.5 31.2 285 15-326 1-291 (340)
39 cd08283 FDH_like_1 Glutathione 100.0 3.9E-39 8.4E-44 307.8 32.8 299 15-324 1-331 (386)
40 cd05278 FDH_like Formaldehyde 100.0 4.3E-39 9.4E-44 302.4 31.1 287 15-325 1-293 (347)
41 cd08246 crotonyl_coA_red croto 100.0 4.1E-39 9E-44 308.2 30.7 295 11-327 9-343 (393)
42 cd08286 FDH_like_ADH2 formalde 100.0 1.4E-38 3E-43 299.1 31.8 286 15-325 1-291 (345)
43 cd08238 sorbose_phosphate_red 100.0 1.3E-38 2.9E-43 306.3 30.6 279 13-327 1-318 (410)
44 TIGR03366 HpnZ_proposed putati 100.0 4.1E-39 8.8E-44 294.7 25.7 238 70-327 1-247 (280)
45 cd08260 Zn_ADH6 Alcohol dehydr 100.0 3E-38 6.6E-43 296.8 32.2 286 15-325 1-292 (345)
46 cd08240 6_hydroxyhexanoate_dh_ 100.0 2.1E-38 4.6E-43 298.5 30.8 287 15-327 1-301 (350)
47 cd08263 Zn_ADH10 Alcohol dehyd 100.0 7.4E-38 1.6E-42 296.9 32.1 305 15-325 1-314 (367)
48 PRK05396 tdh L-threonine 3-deh 100.0 7.3E-38 1.6E-42 293.8 31.3 282 15-324 1-287 (341)
49 cd05283 CAD1 Cinnamyl alcohol 100.0 1.1E-37 2.3E-42 292.4 30.0 287 16-327 1-290 (337)
50 cd08284 FDH_like_2 Glutathione 100.0 2E-37 4.4E-42 290.8 31.8 285 15-323 1-290 (344)
51 cd08287 FDH_like_ADH3 formalde 100.0 2.8E-37 6.1E-42 290.1 32.1 282 15-324 1-292 (345)
52 cd08261 Zn_ADH7 Alcohol dehydr 100.0 3.4E-37 7.4E-42 288.7 32.5 279 15-323 1-281 (337)
53 cd08258 Zn_ADH4 Alcohol dehydr 100.0 3.9E-37 8.5E-42 285.0 31.6 288 15-329 1-294 (306)
54 TIGR01751 crot-CoA-red crotony 100.0 2.1E-37 4.5E-42 297.0 30.4 295 11-327 4-338 (398)
55 PRK09422 ethanol-active dehydr 100.0 3.6E-37 7.9E-42 288.4 31.1 283 15-326 1-287 (338)
56 cd08265 Zn_ADH3 Alcohol dehydr 100.0 2.8E-37 6E-42 294.8 30.8 288 13-325 27-332 (384)
57 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 4.8E-37 1E-41 287.0 31.3 284 15-325 1-288 (338)
58 KOG0025 Zn2+-binding dehydroge 100.0 9.5E-38 2.1E-42 272.9 24.5 275 5-331 10-295 (354)
59 cd08235 iditol_2_DH_like L-idi 100.0 1.1E-36 2.3E-41 285.9 32.6 284 15-325 1-292 (343)
60 PLN02702 L-idonate 5-dehydroge 100.0 8.9E-37 1.9E-41 289.2 32.1 289 12-325 15-310 (364)
61 cd08264 Zn_ADH_like2 Alcohol d 100.0 5.1E-37 1.1E-41 285.9 29.4 276 15-326 1-280 (325)
62 cd08297 CAD3 Cinnamyl alcohol 100.0 2E-36 4.3E-41 283.9 32.6 285 15-325 1-291 (341)
63 PRK13771 putative alcohol dehy 100.0 6.3E-37 1.4E-41 286.3 28.6 278 15-325 1-282 (334)
64 cd08291 ETR_like_1 2-enoyl thi 100.0 5.1E-37 1.1E-41 286.2 27.4 260 15-328 1-272 (324)
65 TIGR01202 bchC 2-desacetyl-2-h 100.0 3.9E-37 8.5E-42 285.3 25.9 252 14-327 1-258 (308)
66 cd08282 PFDH_like Pseudomonas 100.0 3.2E-36 6.9E-41 286.6 31.1 287 15-324 1-322 (375)
67 cd08242 MDR_like Medium chain 100.0 3.7E-36 7.9E-41 279.6 30.0 267 15-325 1-270 (319)
68 cd05285 sorbitol_DH Sorbitol d 100.0 4.5E-36 9.7E-41 282.0 30.9 280 17-324 1-289 (343)
69 cd05281 TDH Threonine dehydrog 100.0 5.1E-36 1.1E-40 281.4 30.7 281 15-324 1-287 (341)
70 cd08292 ETR_like_2 2-enoyl thi 100.0 6E-36 1.3E-40 278.2 28.9 259 15-327 1-266 (324)
71 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.4E-35 3.1E-40 276.2 31.5 278 15-324 1-281 (332)
72 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.3E-35 2.8E-40 276.8 30.6 286 15-326 1-292 (342)
73 cd08236 sugar_DH NAD(P)-depend 100.0 2.2E-35 4.7E-40 277.1 32.2 284 15-327 1-288 (343)
74 cd08298 CAD2 Cinnamyl alcohol 100.0 1.4E-35 3.1E-40 276.6 30.2 275 15-325 1-281 (329)
75 cd08245 CAD Cinnamyl alcohol d 100.0 1.7E-35 3.6E-40 276.3 30.1 280 16-326 1-283 (330)
76 cd08234 threonine_DH_like L-th 100.0 6.7E-35 1.4E-39 272.5 31.3 281 15-325 1-284 (334)
77 cd08262 Zn_ADH8 Alcohol dehydr 100.0 6.3E-35 1.4E-39 273.7 31.2 273 15-324 1-288 (341)
78 TIGR00692 tdh L-threonine 3-de 100.0 7.8E-35 1.7E-39 273.3 29.9 276 21-324 5-286 (340)
79 cd08232 idonate-5-DH L-idonate 100.0 1.2E-34 2.6E-39 271.6 30.0 280 19-324 2-286 (339)
80 cd08274 MDR9 Medium chain dehy 100.0 2.6E-34 5.5E-39 270.3 28.8 274 15-326 1-300 (350)
81 cd08293 PTGR2 Prostaglandin re 100.0 3.9E-34 8.4E-39 268.8 26.4 221 27-302 23-256 (345)
82 cd08290 ETR 2-enoyl thioester 100.0 5E-34 1.1E-38 267.5 27.1 263 15-327 1-279 (341)
83 cd05188 MDR Medium chain reduc 100.0 7.6E-34 1.6E-38 256.4 27.3 259 41-329 1-262 (271)
84 cd08295 double_bond_reductase_ 100.0 7E-34 1.5E-38 266.7 27.8 258 14-327 7-284 (338)
85 PLN03154 putative allyl alcoho 100.0 1.4E-33 3.1E-38 265.8 29.5 260 12-327 6-291 (348)
86 cd08294 leukotriene_B4_DH_like 100.0 3.2E-33 7E-38 260.5 28.8 252 14-327 2-275 (329)
87 PTZ00354 alcohol dehydrogenase 100.0 5.2E-33 1.1E-37 259.1 28.9 261 14-327 1-269 (334)
88 TIGR02817 adh_fam_1 zinc-bindi 100.0 2.4E-33 5.1E-38 262.3 26.6 254 16-324 1-268 (336)
89 cd08276 MDR7 Medium chain dehy 100.0 1.4E-32 3E-37 256.3 31.1 281 15-326 1-286 (336)
90 TIGR02825 B4_12hDH leukotriene 100.0 7.9E-33 1.7E-37 258.1 28.3 239 27-327 19-271 (325)
91 PRK10754 quinone oxidoreductas 100.0 8.4E-33 1.8E-37 257.7 27.4 239 14-304 1-243 (327)
92 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 1.8E-32 3.9E-37 254.8 28.9 262 15-327 1-271 (325)
93 cd08244 MDR_enoyl_red Possible 100.0 2.2E-32 4.9E-37 254.0 29.3 261 15-327 1-269 (324)
94 cd08289 MDR_yhfp_like Yhfp put 100.0 5.3E-32 1.2E-36 252.0 28.9 260 15-325 1-269 (326)
95 cd08250 Mgc45594_like Mgc45594 100.0 1.3E-31 2.8E-36 249.9 28.3 256 14-326 1-273 (329)
96 cd08249 enoyl_reductase_like e 100.0 5.4E-32 1.2E-36 254.1 25.1 243 15-304 1-258 (339)
97 TIGR02823 oxido_YhdH putative 100.0 3.3E-31 7.1E-36 246.5 29.1 259 16-326 1-268 (323)
98 cd05282 ETR_like 2-enoyl thioe 100.0 2.7E-31 5.8E-36 246.6 27.2 249 27-328 14-266 (323)
99 cd08269 Zn_ADH9 Alcohol dehydr 100.0 5.7E-31 1.2E-35 243.2 28.6 251 21-327 2-257 (312)
100 cd05276 p53_inducible_oxidored 100.0 5.2E-31 1.1E-35 243.1 28.0 260 15-327 1-266 (323)
101 cd08252 AL_MDR Arginate lyase 100.0 5.8E-31 1.3E-35 246.0 27.5 258 15-326 1-272 (336)
102 cd08243 quinone_oxidoreductase 100.0 1.1E-30 2.3E-35 241.8 28.3 259 15-325 1-268 (320)
103 cd08253 zeta_crystallin Zeta-c 100.0 2E-30 4.4E-35 239.6 28.6 263 15-326 1-269 (325)
104 cd08270 MDR4 Medium chain dehy 100.0 3E-30 6.5E-35 237.9 27.4 246 15-327 1-252 (305)
105 cd05286 QOR2 Quinone oxidoredu 100.0 7.3E-30 1.6E-34 235.1 28.8 256 16-325 1-261 (320)
106 cd08248 RTN4I1 Human Reticulon 100.0 3E-30 6.5E-35 242.6 25.4 235 15-303 1-260 (350)
107 cd08288 MDR_yhdh Yhdh putative 100.0 1.3E-29 2.8E-34 235.7 27.9 259 15-325 1-268 (324)
108 cd08272 MDR6 Medium chain dehy 100.0 2.1E-29 4.6E-34 233.3 27.7 259 15-326 1-264 (326)
109 TIGR02824 quinone_pig3 putativ 100.0 3.4E-29 7.3E-34 231.7 28.7 260 15-327 1-266 (325)
110 cd08247 AST1_like AST1 is a cy 100.0 1.5E-29 3.3E-34 238.4 26.9 239 15-300 1-259 (352)
111 cd08271 MDR5 Medium chain dehy 100.0 2.1E-29 4.5E-34 233.6 27.4 238 15-303 1-242 (325)
112 KOG1198 Zinc-binding oxidoredu 100.0 5.4E-30 1.2E-34 239.0 20.9 224 27-304 20-259 (347)
113 cd08268 MDR2 Medium chain dehy 100.0 1.6E-28 3.4E-33 227.5 29.9 264 15-326 1-270 (328)
114 cd05288 PGDH Prostaglandin deh 100.0 9.3E-29 2E-33 230.4 27.3 254 15-327 2-277 (329)
115 cd08251 polyketide_synthase po 100.0 1.1E-28 2.4E-33 226.2 26.9 237 34-322 2-242 (303)
116 COG2130 Putative NADP-dependen 100.0 4.5E-29 9.7E-34 220.6 22.7 243 26-326 26-282 (340)
117 cd08273 MDR8 Medium chain dehy 100.0 2.2E-28 4.8E-33 228.0 26.8 232 15-304 1-237 (331)
118 cd08241 QOR1 Quinone oxidoredu 100.0 1.1E-27 2.3E-32 221.2 27.9 259 15-327 1-266 (323)
119 cd05195 enoyl_red enoyl reduct 100.0 1E-27 2.2E-32 217.6 24.4 229 40-324 1-234 (293)
120 cd05289 MDR_like_2 alcohol deh 100.0 1.1E-27 2.5E-32 219.9 23.7 234 15-303 1-241 (309)
121 cd08275 MDR3 Medium chain dehy 100.0 8.9E-27 1.9E-31 217.1 28.1 256 16-326 1-279 (337)
122 smart00829 PKS_ER Enoylreducta 100.0 8E-27 1.7E-31 211.7 23.5 225 44-325 2-231 (288)
123 cd08267 MDR1 Medium chain dehy 100.0 1.2E-26 2.5E-31 214.7 23.6 224 28-304 15-244 (319)
124 cd08255 2-desacetyl-2-hydroxye 99.9 2.3E-23 5E-28 189.6 22.4 201 60-326 14-216 (277)
125 PF08240 ADH_N: Alcohol dehydr 99.9 5.7E-24 1.2E-28 167.1 8.5 107 39-165 1-109 (109)
126 KOG1196 Predicted NAD-dependen 99.9 5.5E-21 1.2E-25 168.9 24.3 244 29-330 26-289 (343)
127 KOG1202 Animal-type fatty acid 99.9 1.2E-21 2.7E-26 196.0 14.5 240 27-329 1429-1685(2376)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 1.4E-17 3E-22 134.6 11.9 117 207-328 1-118 (130)
129 PRK09424 pntA NAD(P) transhydr 99.3 6.5E-11 1.4E-15 115.5 13.9 130 194-325 162-314 (509)
130 cd00401 AdoHcyase S-adenosyl-L 99.1 1E-09 2.2E-14 104.7 12.8 124 184-327 188-314 (413)
131 TIGR00561 pntA NAD(P) transhyd 98.6 3.5E-07 7.5E-12 89.4 11.6 108 195-304 162-288 (511)
132 PRK05476 S-adenosyl-L-homocyst 98.5 2E-06 4.4E-11 82.5 13.8 103 184-303 198-302 (425)
133 TIGR01035 hemA glutamyl-tRNA r 98.4 3.7E-08 8E-13 95.1 -0.4 180 70-304 89-281 (417)
134 TIGR00936 ahcY adenosylhomocys 98.4 6.7E-06 1.4E-10 78.5 14.3 111 184-314 181-293 (406)
135 cd05213 NAD_bind_Glutamyl_tRNA 98.3 3.5E-06 7.5E-11 78.3 9.5 131 160-304 139-277 (311)
136 PRK08306 dipicolinate synthase 98.3 1.8E-05 3.9E-10 73.0 13.4 95 196-304 151-245 (296)
137 PRK00517 prmA ribosomal protei 98.3 1.7E-05 3.6E-10 71.4 12.9 132 151-304 79-217 (250)
138 PLN02494 adenosylhomocysteinas 98.2 1.4E-05 3.1E-10 77.1 12.5 102 185-303 241-344 (477)
139 PRK11873 arsM arsenite S-adeno 98.1 1.4E-05 3E-10 72.8 8.2 103 191-303 72-186 (272)
140 TIGR02853 spore_dpaA dipicolin 97.9 0.0001 2.2E-09 67.6 11.5 94 196-303 150-243 (287)
141 PRK12771 putative glutamate sy 97.9 8.4E-06 1.8E-10 82.0 4.7 80 193-279 133-233 (564)
142 PTZ00075 Adenosylhomocysteinas 97.9 0.00014 2.9E-09 70.6 11.9 93 194-303 251-344 (476)
143 PRK00045 hemA glutamyl-tRNA re 97.9 4.1E-05 8.9E-10 74.2 8.3 184 70-304 91-284 (423)
144 TIGR00518 alaDH alanine dehydr 97.9 0.00012 2.7E-09 69.5 11.2 99 196-304 166-271 (370)
145 PRK08324 short chain dehydroge 97.8 0.0002 4.4E-09 73.6 12.5 140 150-304 386-561 (681)
146 TIGR00406 prmA ribosomal prote 97.8 0.00017 3.7E-09 66.3 10.4 99 194-304 157-263 (288)
147 PF01488 Shikimate_DH: Shikima 97.7 0.00012 2.5E-09 59.5 7.5 100 194-304 9-113 (135)
148 COG2518 Pcm Protein-L-isoaspar 97.7 0.00024 5.3E-09 61.3 9.5 118 170-300 48-170 (209)
149 COG4221 Short-chain alcohol de 97.7 0.00018 3.8E-09 63.4 8.6 80 196-278 5-91 (246)
150 COG0300 DltE Short-chain dehyd 97.7 0.00094 2E-08 60.2 12.5 81 195-279 4-95 (265)
151 PF11017 DUF2855: Protein of u 97.6 0.0032 6.9E-08 58.0 15.3 139 151-304 91-235 (314)
152 KOG1205 Predicted dehydrogenas 97.6 0.00078 1.7E-08 61.2 11.0 111 195-310 10-160 (282)
153 PRK05993 short chain dehydroge 97.5 0.0019 4.1E-08 58.7 12.1 105 196-304 3-138 (277)
154 COG3967 DltE Short-chain dehyd 97.4 0.00091 2E-08 57.3 8.8 80 196-278 4-88 (245)
155 PRK05786 fabG 3-ketoacyl-(acyl 97.4 0.0028 6.1E-08 55.9 12.3 107 196-304 4-139 (238)
156 PF00670 AdoHcyase_NAD: S-aden 97.4 0.003 6.5E-08 52.5 11.3 111 186-316 11-123 (162)
157 PRK00377 cbiT cobalt-precorrin 97.4 0.0024 5.2E-08 55.3 11.3 103 190-300 34-145 (198)
158 COG2264 PrmA Ribosomal protein 97.3 0.0019 4.1E-08 59.0 10.4 139 151-304 121-267 (300)
159 PRK11705 cyclopropane fatty ac 97.3 0.0014 3E-08 62.7 10.0 109 180-300 151-267 (383)
160 KOG1209 1-Acyl dihydroxyaceton 97.3 0.003 6.6E-08 54.5 10.6 111 196-309 6-148 (289)
161 PRK05693 short chain dehydroge 97.3 0.005 1.1E-07 55.7 12.7 78 198-278 2-82 (274)
162 TIGR00438 rrmJ cell division p 97.3 0.0052 1.1E-07 52.6 12.0 103 191-302 27-148 (188)
163 COG2242 CobL Precorrin-6B meth 97.3 0.0034 7.3E-08 53.2 10.2 105 190-303 28-138 (187)
164 PRK13943 protein-L-isoaspartat 97.2 0.0038 8.3E-08 58.2 11.3 101 190-299 74-179 (322)
165 PRK06182 short chain dehydroge 97.2 0.004 8.6E-08 56.3 10.8 80 196-278 2-84 (273)
166 PRK13940 glutamyl-tRNA reducta 97.1 0.0038 8.2E-08 60.2 10.4 99 194-304 178-277 (414)
167 PRK13942 protein-L-isoaspartat 97.1 0.0096 2.1E-07 52.1 11.7 101 188-299 68-175 (212)
168 PF06325 PrmA: Ribosomal prote 97.1 0.0046 9.9E-08 56.8 9.9 134 151-304 120-263 (295)
169 PRK05872 short chain dehydroge 97.1 0.0043 9.3E-08 57.0 9.9 80 196-278 8-95 (296)
170 PLN03209 translocon at the inn 97.0 0.0067 1.4E-07 60.5 11.6 105 190-303 73-210 (576)
171 PRK12742 oxidoreductase; Provi 97.0 0.015 3.2E-07 51.2 12.8 102 196-304 5-135 (237)
172 PRK08177 short chain dehydroge 97.0 0.0046 1E-07 54.2 9.4 77 198-278 2-81 (225)
173 PF13602 ADH_zinc_N_2: Zinc-bi 97.0 0.00017 3.6E-09 57.5 -0.2 50 240-301 1-52 (127)
174 PF12847 Methyltransf_18: Meth 97.0 0.005 1.1E-07 47.6 8.2 92 196-298 1-109 (112)
175 PRK04148 hypothetical protein; 97.0 0.0042 9E-08 50.1 7.7 100 193-303 13-112 (134)
176 COG0373 HemA Glutamyl-tRNA red 96.9 0.011 2.4E-07 56.6 11.7 98 195-304 176-278 (414)
177 PRK07326 short chain dehydroge 96.9 0.013 2.9E-07 51.5 11.6 82 196-278 5-92 (237)
178 PRK13944 protein-L-isoaspartat 96.9 0.017 3.6E-07 50.3 11.9 100 189-299 65-172 (205)
179 PRK00107 gidB 16S rRNA methylt 96.9 0.014 3E-07 50.1 11.2 99 193-301 42-146 (187)
180 cd01080 NAD_bind_m-THF_DH_Cycl 96.9 0.0082 1.8E-07 50.6 9.5 97 175-303 22-119 (168)
181 PF13460 NAD_binding_10: NADH( 96.9 0.018 3.9E-07 48.6 11.7 95 200-304 1-101 (183)
182 COG2227 UbiG 2-polyprenyl-3-me 96.9 0.0092 2E-07 52.6 9.8 96 195-300 58-161 (243)
183 PRK12939 short chain dehydroge 96.9 0.013 2.9E-07 51.8 11.3 80 196-278 6-94 (250)
184 PF02826 2-Hacid_dh_C: D-isome 96.9 0.0084 1.8E-07 51.0 9.4 46 195-241 34-79 (178)
185 PRK14967 putative methyltransf 96.9 0.021 4.5E-07 50.3 12.2 99 190-301 30-160 (223)
186 PRK07109 short chain dehydroge 96.8 0.014 3E-07 54.8 11.4 106 196-304 7-147 (334)
187 PRK07806 short chain dehydroge 96.8 0.02 4.4E-07 50.7 12.0 103 196-302 5-136 (248)
188 PRK08261 fabG 3-ketoacyl-(acyl 96.8 0.015 3.4E-07 56.7 12.1 81 195-278 208-294 (450)
189 COG1748 LYS9 Saccharopine dehy 96.8 0.017 3.7E-07 54.9 11.8 98 198-304 2-103 (389)
190 PRK08265 short chain dehydroge 96.8 0.017 3.7E-07 51.9 11.5 80 196-278 5-90 (261)
191 cd05311 NAD_bind_2_malic_enz N 96.8 0.021 4.6E-07 50.5 11.7 94 195-303 23-131 (226)
192 cd00755 YgdL_like Family of ac 96.8 0.0092 2E-07 53.0 9.2 103 197-303 11-137 (231)
193 TIGR02469 CbiT precorrin-6Y C5 96.8 0.016 3.5E-07 45.3 9.8 101 190-300 13-122 (124)
194 PRK06139 short chain dehydroge 96.8 0.006 1.3E-07 57.2 8.4 80 196-278 6-94 (330)
195 PRK06500 short chain dehydroge 96.8 0.022 4.7E-07 50.5 11.6 78 196-278 5-90 (249)
196 PRK12549 shikimate 5-dehydroge 96.8 0.014 3E-07 53.5 10.5 43 195-237 125-167 (284)
197 PRK07231 fabG 3-ketoacyl-(acyl 96.7 0.023 5E-07 50.3 11.7 82 196-278 4-91 (251)
198 PRK07576 short chain dehydroge 96.7 0.026 5.6E-07 50.9 12.1 79 196-277 8-95 (264)
199 PRK07060 short chain dehydroge 96.7 0.011 2.4E-07 52.3 9.4 77 196-278 8-87 (245)
200 PF03446 NAD_binding_2: NAD bi 96.7 0.024 5.2E-07 47.4 10.9 90 198-303 2-97 (163)
201 PRK08267 short chain dehydroge 96.7 0.023 5.1E-07 50.8 11.4 78 198-278 2-87 (260)
202 PRK07502 cyclohexadienyl dehyd 96.7 0.014 3.1E-07 54.0 10.2 93 198-303 7-103 (307)
203 PRK08618 ornithine cyclodeamin 96.7 0.028 6E-07 52.6 12.2 103 195-312 125-233 (325)
204 TIGR01809 Shik-DH-AROM shikima 96.7 0.0067 1.5E-07 55.6 7.8 76 196-279 124-201 (282)
205 PF01135 PCMT: Protein-L-isoas 96.7 0.0062 1.4E-07 53.2 7.2 103 188-301 64-174 (209)
206 PRK08017 oxidoreductase; Provi 96.7 0.011 2.4E-07 52.6 9.1 77 198-278 3-84 (256)
207 PRK07825 short chain dehydroge 96.7 0.011 2.3E-07 53.5 9.0 79 197-278 5-88 (273)
208 PRK06057 short chain dehydroge 96.6 0.011 2.3E-07 52.9 8.8 80 196-278 6-89 (255)
209 PRK15116 sulfur acceptor prote 96.6 0.022 4.7E-07 51.6 10.8 105 196-304 29-157 (268)
210 PRK08415 enoyl-(acyl carrier p 96.6 0.03 6.4E-07 51.0 11.8 105 196-304 4-147 (274)
211 PRK03369 murD UDP-N-acetylmura 96.6 0.012 2.5E-07 58.3 9.8 74 193-279 8-81 (488)
212 PF02353 CMAS: Mycolic acid cy 96.6 0.0032 6.9E-08 57.3 5.2 98 188-299 54-165 (273)
213 COG2230 Cfa Cyclopropane fatty 96.6 0.016 3.4E-07 52.7 9.4 106 184-304 60-180 (283)
214 PRK14175 bifunctional 5,10-met 96.6 0.022 4.7E-07 52.0 10.3 95 176-303 137-233 (286)
215 PLN00203 glutamyl-tRNA reducta 96.6 0.023 4.9E-07 56.4 11.1 97 197-304 266-373 (519)
216 PRK12828 short chain dehydroge 96.6 0.039 8.5E-07 48.3 11.8 80 196-278 6-92 (239)
217 PRK08589 short chain dehydroge 96.5 0.032 7E-07 50.5 11.4 79 196-278 5-92 (272)
218 PRK06200 2,3-dihydroxy-2,3-dih 96.5 0.014 3E-07 52.4 8.9 80 196-278 5-90 (263)
219 PRK08339 short chain dehydroge 96.5 0.016 3.5E-07 52.2 9.4 106 196-304 7-147 (263)
220 PRK12829 short chain dehydroge 96.5 0.012 2.7E-07 52.6 8.5 82 192-278 6-96 (264)
221 TIGR00080 pimt protein-L-isoas 96.5 0.0079 1.7E-07 52.7 7.1 101 188-299 69-176 (215)
222 TIGR02356 adenyl_thiF thiazole 96.5 0.02 4.4E-07 49.7 9.4 35 196-230 20-54 (202)
223 PRK08628 short chain dehydroge 96.5 0.031 6.6E-07 49.9 11.0 80 196-278 6-93 (258)
224 PRK07340 ornithine cyclodeamin 96.5 0.02 4.4E-07 53.0 9.9 106 195-315 123-232 (304)
225 PRK06949 short chain dehydroge 96.5 0.015 3.3E-07 51.8 8.7 83 195-278 7-96 (258)
226 cd01075 NAD_bind_Leu_Phe_Val_D 96.5 0.048 1E-06 47.3 11.5 47 195-242 26-73 (200)
227 PRK07904 short chain dehydroge 96.5 0.023 5E-07 50.9 9.8 85 193-278 4-97 (253)
228 PRK09186 flagellin modificatio 96.5 0.051 1.1E-06 48.3 12.1 79 196-277 3-92 (256)
229 PRK06398 aldose dehydrogenase; 96.4 0.0095 2.1E-07 53.5 7.2 75 196-278 5-82 (258)
230 cd01483 E1_enzyme_family Super 96.4 0.03 6.5E-07 45.6 9.6 99 199-303 1-124 (143)
231 PRK06484 short chain dehydroge 96.4 0.037 7.9E-07 55.0 12.1 106 195-304 267-404 (520)
232 PRK07831 short chain dehydroge 96.4 0.019 4.2E-07 51.4 9.2 82 194-278 14-107 (262)
233 PF01262 AlaDh_PNT_C: Alanine 96.4 0.014 3.1E-07 49.0 7.8 104 197-304 20-143 (168)
234 TIGR03325 BphB_TodD cis-2,3-di 96.4 0.012 2.7E-07 52.7 7.9 79 196-277 4-88 (262)
235 PRK06128 oxidoreductase; Provi 96.4 0.049 1.1E-06 50.1 12.0 105 196-304 54-195 (300)
236 COG0169 AroE Shikimate 5-dehyd 96.4 0.011 2.3E-07 54.0 7.4 44 195-238 124-167 (283)
237 cd01065 NAD_bind_Shikimate_DH 96.4 0.021 4.6E-07 46.9 8.6 98 195-303 17-119 (155)
238 COG2226 UbiE Methylase involve 96.4 0.048 1E-06 48.5 11.2 104 190-304 45-160 (238)
239 PRK06196 oxidoreductase; Provi 96.4 0.021 4.5E-07 53.0 9.3 80 196-278 25-109 (315)
240 PRK06101 short chain dehydroge 96.4 0.058 1.3E-06 47.7 11.9 75 198-277 2-80 (240)
241 PRK06505 enoyl-(acyl carrier p 96.4 0.02 4.2E-07 52.0 8.9 80 196-278 6-95 (271)
242 PRK12823 benD 1,6-dihydroxycyc 96.4 0.043 9.3E-07 49.0 11.0 79 196-277 7-93 (260)
243 PRK14027 quinate/shikimate deh 96.4 0.031 6.8E-07 51.2 10.1 43 195-237 125-167 (283)
244 PRK12548 shikimate 5-dehydroge 96.4 0.029 6.3E-07 51.5 10.0 37 195-231 124-160 (289)
245 PRK07402 precorrin-6B methylas 96.4 0.083 1.8E-06 45.4 12.3 104 189-302 33-144 (196)
246 PRK13394 3-hydroxybutyrate deh 96.4 0.036 7.7E-07 49.5 10.4 80 196-278 6-94 (262)
247 PRK01683 trans-aconitate 2-met 96.3 0.042 9.1E-07 49.4 10.9 99 190-300 25-130 (258)
248 PRK06180 short chain dehydroge 96.3 0.014 3E-07 53.0 7.8 80 196-278 3-88 (277)
249 PRK07832 short chain dehydroge 96.3 0.056 1.2E-06 48.8 11.7 77 199-278 2-88 (272)
250 PRK07533 enoyl-(acyl carrier p 96.3 0.023 4.9E-07 51.1 9.1 107 196-304 9-152 (258)
251 PRK06841 short chain dehydroge 96.3 0.021 4.7E-07 50.8 8.9 80 196-278 14-99 (255)
252 TIGR01832 kduD 2-deoxy-D-gluco 96.3 0.027 6E-07 49.9 9.5 82 196-278 4-90 (248)
253 PRK07814 short chain dehydroge 96.3 0.021 4.5E-07 51.3 8.8 80 196-278 9-97 (263)
254 PRK08594 enoyl-(acyl carrier p 96.3 0.058 1.3E-06 48.4 11.6 105 196-304 6-151 (257)
255 PRK08217 fabG 3-ketoacyl-(acyl 96.3 0.025 5.5E-07 50.1 9.2 79 196-277 4-91 (253)
256 PRK09072 short chain dehydroge 96.3 0.028 6E-07 50.5 9.4 80 196-278 4-90 (263)
257 PRK05867 short chain dehydroge 96.3 0.021 4.6E-07 50.9 8.6 80 196-278 8-96 (253)
258 COG1179 Dinucleotide-utilizing 96.3 0.034 7.4E-07 49.0 9.4 105 196-304 29-157 (263)
259 PRK06953 short chain dehydroge 96.3 0.033 7.1E-07 48.6 9.6 77 198-278 2-80 (222)
260 PRK12550 shikimate 5-dehydroge 96.3 0.026 5.6E-07 51.4 9.1 70 193-278 118-188 (272)
261 PRK05866 short chain dehydroge 96.3 0.025 5.4E-07 52.0 9.2 80 196-278 39-127 (293)
262 COG0686 Ald Alanine dehydrogen 96.3 0.015 3.3E-07 53.0 7.4 97 198-304 169-272 (371)
263 PRK06603 enoyl-(acyl carrier p 96.3 0.024 5.1E-07 51.1 8.9 79 196-277 7-95 (260)
264 PRK08862 short chain dehydroge 96.2 0.027 5.9E-07 49.7 8.9 81 196-277 4-92 (227)
265 PLN02780 ketoreductase/ oxidor 96.2 0.022 4.8E-07 53.1 8.7 81 196-278 52-142 (320)
266 PRK09242 tropinone reductase; 96.2 0.097 2.1E-06 46.7 12.5 80 196-278 8-98 (257)
267 PRK06484 short chain dehydroge 96.2 0.042 9E-07 54.6 11.0 80 196-278 4-89 (520)
268 PRK12475 thiamine/molybdopteri 96.2 0.031 6.8E-07 52.5 9.5 36 196-231 23-58 (338)
269 PRK08261 fabG 3-ketoacyl-(acyl 96.2 0.011 2.3E-07 57.8 6.6 95 190-304 27-127 (450)
270 PRK07677 short chain dehydroge 96.2 0.024 5.3E-07 50.5 8.4 81 197-278 1-88 (252)
271 COG2910 Putative NADH-flavin r 96.2 0.037 8E-07 46.8 8.6 95 198-304 1-108 (211)
272 PRK06701 short chain dehydroge 96.2 0.063 1.4E-06 49.2 11.2 107 194-304 43-185 (290)
273 PRK06940 short chain dehydroge 96.2 0.079 1.7E-06 48.1 11.8 103 197-304 2-129 (275)
274 PRK11207 tellurite resistance 96.2 0.02 4.4E-07 49.4 7.5 98 190-299 24-133 (197)
275 CHL00194 ycf39 Ycf39; Provisio 96.2 0.088 1.9E-06 48.8 12.3 96 199-303 2-112 (317)
276 TIGR01318 gltD_gamma_fam gluta 96.2 0.028 6.1E-07 55.3 9.3 77 196-279 140-237 (467)
277 TIGR01470 cysG_Nterm siroheme 96.1 0.13 2.9E-06 44.7 12.5 92 196-300 8-100 (205)
278 PRK08263 short chain dehydroge 96.1 0.047 1E-06 49.4 10.1 79 197-278 3-87 (275)
279 PRK05690 molybdopterin biosynt 96.1 0.041 8.8E-07 49.3 9.5 36 196-231 31-66 (245)
280 PRK07024 short chain dehydroge 96.1 0.035 7.6E-07 49.7 9.1 79 197-278 2-88 (257)
281 PRK06483 dihydromonapterin red 96.1 0.046 9.9E-07 48.1 9.7 79 197-278 2-84 (236)
282 cd01078 NAD_bind_H4MPT_DH NADP 96.1 0.073 1.6E-06 45.7 10.7 99 195-303 26-132 (194)
283 TIGR02355 moeB molybdopterin s 96.1 0.037 8E-07 49.5 8.9 35 197-231 24-58 (240)
284 COG3288 PntA NAD/NADP transhyd 96.1 0.023 4.9E-07 51.7 7.5 130 193-324 160-308 (356)
285 PRK00258 aroE shikimate 5-dehy 96.1 0.02 4.4E-07 52.3 7.5 95 195-300 121-221 (278)
286 PRK12809 putative oxidoreducta 96.1 0.034 7.3E-07 57.0 9.8 77 196-279 309-406 (639)
287 PF03435 Saccharop_dh: Sacchar 96.1 0.036 7.7E-07 53.1 9.4 91 200-299 1-97 (386)
288 PRK12429 3-hydroxybutyrate deh 96.1 0.071 1.5E-06 47.4 10.9 80 196-278 3-91 (258)
289 PRK00811 spermidine synthase; 96.1 0.04 8.7E-07 50.5 9.4 96 195-300 75-191 (283)
290 PRK07062 short chain dehydroge 96.1 0.031 6.7E-07 50.2 8.6 80 196-278 7-97 (265)
291 PRK05717 oxidoreductase; Valid 96.1 0.035 7.6E-07 49.5 8.9 80 196-278 9-94 (255)
292 TIGR02354 thiF_fam2 thiamine b 96.1 0.023 5.1E-07 49.3 7.3 35 196-230 20-54 (200)
293 COG2519 GCD14 tRNA(1-methylade 96.0 0.057 1.2E-06 48.0 9.6 106 190-304 88-199 (256)
294 PRK07478 short chain dehydroge 96.0 0.037 8.1E-07 49.3 8.8 80 196-278 5-93 (254)
295 PRK06079 enoyl-(acyl carrier p 96.0 0.028 6.1E-07 50.3 8.0 105 196-304 6-147 (252)
296 PRK09291 short chain dehydroge 96.0 0.034 7.5E-07 49.5 8.5 73 197-277 2-82 (257)
297 PRK10538 malonic semialdehyde 96.0 0.1 2.2E-06 46.4 11.5 78 198-278 1-84 (248)
298 PLN02366 spermidine synthase 96.0 0.057 1.2E-06 50.1 10.1 100 195-300 90-206 (308)
299 PRK14103 trans-aconitate 2-met 96.0 0.1 2.3E-06 46.8 11.6 96 190-299 23-125 (255)
300 cd00757 ThiF_MoeB_HesA_family 96.0 0.073 1.6E-06 47.1 10.4 35 197-231 21-55 (228)
301 PF13241 NAD_binding_7: Putati 96.0 0.014 3E-07 44.9 5.0 89 196-303 6-94 (103)
302 PRK06153 hypothetical protein; 96.0 0.026 5.6E-07 53.5 7.7 35 196-230 175-209 (393)
303 PRK08340 glucose-1-dehydrogena 96.0 0.046 9.9E-07 49.0 9.2 79 199-278 2-86 (259)
304 PF00899 ThiF: ThiF family; I 96.0 0.032 6.9E-07 45.0 7.3 99 197-301 2-125 (135)
305 PRK08762 molybdopterin biosynt 96.0 0.061 1.3E-06 51.4 10.4 35 196-230 134-168 (376)
306 cd01487 E1_ThiF_like E1_ThiF_l 96.0 0.034 7.3E-07 47.1 7.7 33 199-231 1-33 (174)
307 PRK07985 oxidoreductase; Provi 96.0 0.1 2.2E-06 48.0 11.5 105 196-304 48-189 (294)
308 PRK05653 fabG 3-ketoacyl-(acyl 96.0 0.045 9.7E-07 48.1 8.9 80 196-278 4-92 (246)
309 PRK06194 hypothetical protein; 95.9 0.028 6.1E-07 51.1 7.7 82 196-278 5-93 (287)
310 PRK12747 short chain dehydroge 95.9 0.11 2.4E-06 46.2 11.4 105 196-304 3-148 (252)
311 PRK08223 hypothetical protein; 95.9 0.042 9E-07 50.2 8.6 36 196-231 26-61 (287)
312 KOG0725 Reductases with broad 95.9 0.033 7.2E-07 50.7 8.0 82 195-278 6-99 (270)
313 PRK07574 formate dehydrogenase 95.9 0.076 1.6E-06 50.8 10.7 39 196-235 191-229 (385)
314 COG2084 MmsB 3-hydroxyisobutyr 95.9 0.1 2.2E-06 47.7 11.0 89 199-303 2-98 (286)
315 PRK08213 gluconate 5-dehydroge 95.9 0.049 1.1E-06 48.7 9.0 80 196-278 11-99 (259)
316 PRK07688 thiamine/molybdopteri 95.9 0.057 1.2E-06 50.8 9.6 36 196-231 23-58 (339)
317 PRK14192 bifunctional 5,10-met 95.9 0.068 1.5E-06 48.9 9.9 78 194-303 156-234 (283)
318 PRK07984 enoyl-(acyl carrier p 95.9 0.057 1.2E-06 48.7 9.4 81 196-277 5-93 (262)
319 PRK08690 enoyl-(acyl carrier p 95.9 0.048 1.1E-06 49.0 8.9 82 196-278 5-94 (261)
320 PRK05884 short chain dehydroge 95.9 0.052 1.1E-06 47.6 8.9 74 199-277 2-78 (223)
321 PRK07063 short chain dehydroge 95.9 0.045 9.7E-07 48.9 8.6 80 196-278 6-96 (260)
322 PRK00312 pcm protein-L-isoaspa 95.9 0.14 3.1E-06 44.5 11.6 99 189-300 71-175 (212)
323 PRK07890 short chain dehydroge 95.9 0.052 1.1E-06 48.3 9.0 80 196-278 4-92 (258)
324 PRK05854 short chain dehydroge 95.9 0.054 1.2E-06 50.3 9.3 80 196-278 13-103 (313)
325 PLN03139 formate dehydrogenase 95.9 0.082 1.8E-06 50.6 10.6 45 196-241 198-242 (386)
326 KOG1201 Hydroxysteroid 17-beta 95.8 0.033 7.2E-07 50.6 7.5 81 195-278 36-124 (300)
327 cd01492 Aos1_SUMO Ubiquitin ac 95.8 0.059 1.3E-06 46.6 8.9 101 196-301 20-143 (197)
328 PRK07453 protochlorophyllide o 95.8 0.05 1.1E-06 50.5 9.1 79 196-277 5-92 (322)
329 PRK06125 short chain dehydroge 95.8 0.076 1.6E-06 47.5 9.9 77 196-278 6-91 (259)
330 PRK12367 short chain dehydroge 95.8 0.061 1.3E-06 48.1 9.1 73 196-278 13-89 (245)
331 KOG1199 Short-chain alcohol de 95.8 0.13 2.8E-06 43.1 10.2 85 194-279 6-94 (260)
332 TIGR00477 tehB tellurite resis 95.8 0.043 9.3E-07 47.3 7.9 97 190-299 24-132 (195)
333 PRK12749 quinate/shikimate deh 95.8 0.069 1.5E-06 49.1 9.5 37 196-232 123-159 (288)
334 PF00106 adh_short: short chai 95.8 0.032 7E-07 46.1 6.8 82 198-279 1-91 (167)
335 PLN02657 3,8-divinyl protochlo 95.8 0.15 3.2E-06 49.0 12.2 107 192-303 55-184 (390)
336 PRK12481 2-deoxy-D-gluconate 3 95.8 0.055 1.2E-06 48.3 8.7 80 196-278 7-93 (251)
337 PRK06198 short chain dehydroge 95.8 0.046 9.9E-07 48.8 8.2 82 195-278 4-94 (260)
338 PRK07774 short chain dehydroge 95.8 0.058 1.3E-06 47.8 8.8 78 196-278 5-93 (250)
339 PRK08264 short chain dehydroge 95.8 0.067 1.5E-06 47.0 9.2 75 196-278 5-83 (238)
340 PRK06138 short chain dehydroge 95.8 0.058 1.3E-06 47.8 8.8 80 196-278 4-91 (252)
341 TIGR00507 aroE shikimate 5-deh 95.8 0.068 1.5E-06 48.6 9.4 92 195-301 115-215 (270)
342 PRK06718 precorrin-2 dehydroge 95.8 0.18 4E-06 43.7 11.6 113 196-323 9-124 (202)
343 PRK07370 enoyl-(acyl carrier p 95.8 0.14 3E-06 46.0 11.3 107 196-304 5-151 (258)
344 COG4106 Tam Trans-aconitate me 95.8 0.064 1.4E-06 46.6 8.4 102 190-303 24-131 (257)
345 PLN02781 Probable caffeoyl-CoA 95.7 0.091 2E-06 46.7 9.9 104 190-298 62-176 (234)
346 PRK08219 short chain dehydroge 95.7 0.083 1.8E-06 45.9 9.6 76 198-278 4-81 (227)
347 PRK12769 putative oxidoreducta 95.7 0.053 1.1E-06 55.7 9.5 78 195-279 325-423 (654)
348 PRK07454 short chain dehydroge 95.7 0.072 1.6E-06 47.0 9.2 80 196-278 5-93 (241)
349 PRK08703 short chain dehydroge 95.7 0.045 9.8E-07 48.3 7.9 81 196-278 5-97 (239)
350 PRK08317 hypothetical protein; 95.7 0.12 2.6E-06 45.3 10.6 102 189-301 12-125 (241)
351 PRK06197 short chain dehydroge 95.7 0.065 1.4E-06 49.4 9.2 80 196-278 15-105 (306)
352 PRK12746 short chain dehydroge 95.7 0.17 3.6E-06 45.0 11.6 80 196-278 5-100 (254)
353 PRK07035 short chain dehydroge 95.7 0.061 1.3E-06 47.8 8.7 79 196-277 7-94 (252)
354 PRK06172 short chain dehydroge 95.7 0.044 9.6E-07 48.7 7.7 80 196-278 6-94 (253)
355 PRK15469 ghrA bifunctional gly 95.7 0.073 1.6E-06 49.5 9.4 36 196-232 135-170 (312)
356 PRK08159 enoyl-(acyl carrier p 95.7 0.071 1.5E-06 48.3 9.2 82 195-277 8-97 (272)
357 PRK07417 arogenate dehydrogena 95.7 0.084 1.8E-06 48.2 9.7 89 199-302 2-93 (279)
358 PRK12937 short chain dehydroge 95.7 0.16 3.5E-06 44.7 11.3 106 196-303 4-142 (245)
359 PRK06141 ornithine cyclodeamin 95.7 0.21 4.5E-06 46.5 12.3 105 195-313 123-232 (314)
360 TIGR01505 tartro_sem_red 2-hyd 95.7 0.11 2.3E-06 47.8 10.3 70 199-283 1-70 (291)
361 TIGR00138 gidB 16S rRNA methyl 95.7 0.084 1.8E-06 45.0 9.0 93 196-300 42-142 (181)
362 PRK08643 acetoin reductase; Va 95.6 0.067 1.5E-06 47.6 8.8 79 197-278 2-89 (256)
363 PRK01581 speE spermidine synth 95.6 0.13 2.9E-06 48.5 10.8 99 195-301 149-269 (374)
364 PRK07577 short chain dehydroge 95.6 0.056 1.2E-06 47.4 8.1 75 196-278 2-78 (234)
365 PRK04457 spermidine synthase; 95.6 0.15 3.2E-06 46.2 10.9 95 195-299 65-176 (262)
366 PRK08085 gluconate 5-dehydroge 95.6 0.086 1.9E-06 46.9 9.3 82 196-278 8-96 (254)
367 PRK08277 D-mannonate oxidoredu 95.6 0.072 1.6E-06 48.2 8.9 79 196-277 9-96 (278)
368 PLN00141 Tic62-NAD(P)-related 95.6 0.12 2.7E-06 46.1 10.3 101 195-302 15-133 (251)
369 PLN02253 xanthoxin dehydrogena 95.6 0.061 1.3E-06 48.7 8.4 80 196-278 17-104 (280)
370 PRK08220 2,3-dihydroxybenzoate 95.6 0.15 3.4E-06 45.1 10.9 75 196-278 7-86 (252)
371 PRK06720 hypothetical protein; 95.6 0.11 2.3E-06 43.9 9.1 82 196-278 15-103 (169)
372 PF02254 TrkA_N: TrkA-N domain 95.6 0.15 3.3E-06 39.5 9.6 93 200-300 1-96 (116)
373 PRK06719 precorrin-2 dehydroge 95.6 0.16 3.5E-06 42.2 10.1 82 196-292 12-93 (157)
374 PRK05876 short chain dehydroge 95.6 0.049 1.1E-06 49.5 7.6 80 196-278 5-93 (275)
375 PRK07523 gluconate 5-dehydroge 95.5 0.079 1.7E-06 47.2 8.8 80 196-278 9-97 (255)
376 TIGR03206 benzo_BadH 2-hydroxy 95.5 0.08 1.7E-06 46.8 8.8 81 196-277 2-89 (250)
377 TIGR02992 ectoine_eutC ectoine 95.5 0.18 3.9E-06 47.2 11.4 105 195-313 127-237 (326)
378 PRK07074 short chain dehydroge 95.5 0.081 1.8E-06 47.1 8.8 79 197-278 2-87 (257)
379 cd05312 NAD_bind_1_malic_enz N 95.5 0.49 1.1E-05 43.1 13.7 114 196-323 24-165 (279)
380 PRK07791 short chain dehydroge 95.5 0.1 2.2E-06 47.7 9.6 81 195-278 4-102 (286)
381 PRK06114 short chain dehydroge 95.5 0.092 2E-06 46.8 9.1 80 196-278 7-96 (254)
382 PRK08328 hypothetical protein; 95.5 0.066 1.4E-06 47.5 7.9 36 196-231 26-61 (231)
383 PRK05875 short chain dehydroge 95.5 0.085 1.8E-06 47.6 8.9 79 196-277 6-95 (276)
384 PRK08644 thiamine biosynthesis 95.5 0.097 2.1E-06 45.8 8.8 35 196-230 27-61 (212)
385 PRK06077 fabG 3-ketoacyl-(acyl 95.4 0.18 3.9E-06 44.6 10.7 105 196-304 5-144 (252)
386 PRK11559 garR tartronate semia 95.4 0.18 3.8E-06 46.4 10.9 71 198-283 3-73 (296)
387 PRK08300 acetaldehyde dehydrog 95.4 0.29 6.3E-06 45.1 12.1 116 198-323 5-129 (302)
388 PRK06179 short chain dehydroge 95.4 0.039 8.3E-07 49.7 6.4 78 196-278 3-83 (270)
389 PRK08993 2-deoxy-D-gluconate 3 95.4 0.1 2.2E-06 46.5 9.1 82 196-278 9-95 (253)
390 PRK11036 putative S-adenosyl-L 95.4 0.12 2.6E-06 46.5 9.5 93 195-299 43-148 (255)
391 PRK08251 short chain dehydroge 95.4 0.11 2.3E-06 46.0 9.2 78 197-277 2-90 (248)
392 PRK08287 cobalt-precorrin-6Y C 95.4 0.24 5.3E-06 42.1 11.0 98 190-300 25-131 (187)
393 PLN02256 arogenate dehydrogena 95.4 0.3 6.4E-06 45.3 12.2 96 190-302 29-129 (304)
394 PRK12384 sorbitol-6-phosphate 95.4 0.088 1.9E-06 47.0 8.6 79 197-278 2-91 (259)
395 PRK07856 short chain dehydroge 95.4 0.078 1.7E-06 47.2 8.2 76 196-278 5-85 (252)
396 PRK14188 bifunctional 5,10-met 95.4 0.16 3.5E-06 46.7 10.2 94 176-303 137-233 (296)
397 COG0569 TrkA K+ transport syst 95.4 0.1 2.3E-06 46.1 8.8 75 198-279 1-77 (225)
398 TIGR03840 TMPT_Se_Te thiopurin 95.4 0.14 3.1E-06 44.8 9.6 118 194-315 32-173 (213)
399 PRK07411 hypothetical protein; 95.3 0.051 1.1E-06 52.1 7.2 35 197-231 38-72 (390)
400 PRK08303 short chain dehydroge 95.3 0.098 2.1E-06 48.4 8.9 34 196-230 7-41 (305)
401 PRK06935 2-deoxy-D-gluconate 3 95.3 0.1 2.2E-06 46.6 8.8 79 196-278 14-101 (258)
402 PRK06997 enoyl-(acyl carrier p 95.3 0.096 2.1E-06 47.1 8.7 82 196-278 5-94 (260)
403 PRK06181 short chain dehydroge 95.3 0.095 2.1E-06 46.8 8.7 79 197-278 1-88 (263)
404 PTZ00098 phosphoethanolamine N 95.3 0.15 3.2E-06 46.2 9.9 104 189-302 45-158 (263)
405 PRK07067 sorbitol dehydrogenas 95.3 0.083 1.8E-06 47.1 8.2 80 196-278 5-90 (257)
406 PLN02244 tocopherol O-methyltr 95.3 0.056 1.2E-06 50.9 7.3 95 195-301 117-224 (340)
407 TIGR03215 ac_ald_DH_ac acetald 95.3 0.26 5.7E-06 45.1 11.4 88 199-299 3-94 (285)
408 COG4122 Predicted O-methyltran 95.3 0.29 6.2E-06 43.0 11.1 106 191-301 54-167 (219)
409 PRK05600 thiamine biosynthesis 95.3 0.062 1.3E-06 51.2 7.6 35 196-230 40-74 (370)
410 PRK12826 3-ketoacyl-(acyl-carr 95.3 0.066 1.4E-06 47.3 7.4 82 196-278 5-93 (251)
411 PF03807 F420_oxidored: NADP o 95.3 0.67 1.4E-05 34.6 11.9 85 199-299 1-93 (96)
412 PRK13403 ketol-acid reductoiso 95.2 0.18 4E-06 46.8 10.2 89 194-299 13-105 (335)
413 PF07991 IlvN: Acetohydroxy ac 95.2 0.3 6.5E-06 40.6 10.4 87 196-299 3-94 (165)
414 PRK08226 short chain dehydroge 95.2 0.073 1.6E-06 47.6 7.6 80 196-278 5-92 (263)
415 PRK14618 NAD(P)H-dependent gly 95.2 0.22 4.8E-06 46.5 11.1 95 198-301 5-105 (328)
416 cd01485 E1-1_like Ubiquitin ac 95.2 0.24 5.3E-06 42.8 10.5 34 197-230 19-52 (198)
417 PRK00121 trmB tRNA (guanine-N( 95.2 0.31 6.7E-06 42.2 11.3 99 196-302 40-158 (202)
418 PRK14194 bifunctional 5,10-met 95.2 0.18 3.9E-06 46.4 10.1 95 176-303 138-234 (301)
419 PLN02730 enoyl-[acyl-carrier-p 95.2 0.26 5.6E-06 45.7 11.3 38 195-234 7-47 (303)
420 PRK06463 fabG 3-ketoacyl-(acyl 95.2 0.12 2.7E-06 46.0 9.0 80 196-278 6-89 (255)
421 PRK06482 short chain dehydroge 95.2 0.13 2.9E-06 46.3 9.4 78 198-278 3-86 (276)
422 PRK08291 ectoine utilization p 95.2 0.34 7.3E-06 45.4 12.2 105 195-313 130-240 (330)
423 PRK06124 gluconate 5-dehydroge 95.2 0.13 2.8E-06 45.8 9.1 80 196-278 10-98 (256)
424 PRK06914 short chain dehydroge 95.2 0.12 2.7E-06 46.6 9.1 78 197-278 3-91 (280)
425 PRK05597 molybdopterin biosynt 95.2 0.16 3.4E-06 48.1 10.0 36 196-231 27-62 (355)
426 PRK07819 3-hydroxybutyryl-CoA 95.2 0.15 3.2E-06 46.8 9.5 38 198-236 6-43 (286)
427 PRK07878 molybdopterin biosynt 95.2 0.082 1.8E-06 50.8 8.0 36 196-231 41-76 (392)
428 PRK04266 fibrillarin; Provisio 95.1 0.31 6.7E-06 43.1 11.0 101 190-298 66-174 (226)
429 PRK08945 putative oxoacyl-(acy 95.1 0.16 3.5E-06 45.0 9.4 85 193-278 8-102 (247)
430 TIGR00872 gnd_rel 6-phosphoglu 95.1 0.24 5.1E-06 45.7 10.7 89 199-301 2-94 (298)
431 PRK14982 acyl-ACP reductase; P 95.1 0.12 2.6E-06 48.5 8.7 95 195-304 153-250 (340)
432 PRK07102 short chain dehydroge 95.1 0.17 3.6E-06 44.7 9.4 76 198-278 2-86 (243)
433 PRK08278 short chain dehydroge 95.1 0.082 1.8E-06 47.9 7.5 80 196-278 5-100 (273)
434 PRK07424 bifunctional sterol d 95.1 0.11 2.5E-06 50.0 8.8 74 196-278 177-255 (406)
435 PRK14191 bifunctional 5,10-met 95.1 0.22 4.8E-06 45.5 10.1 95 176-303 136-232 (285)
436 cd05212 NAD_bind_m-THF_DH_Cycl 95.1 0.28 6E-06 40.0 9.7 94 177-303 8-103 (140)
437 PRK07097 gluconate 5-dehydroge 95.1 0.11 2.3E-06 46.7 8.1 80 196-278 9-97 (265)
438 cd05211 NAD_bind_Glu_Leu_Phe_V 95.0 0.3 6.5E-06 42.9 10.6 47 195-241 21-77 (217)
439 cd01484 E1-2_like Ubiquitin ac 95.0 0.12 2.5E-06 46.0 8.0 33 199-231 1-33 (234)
440 PRK12743 oxidoreductase; Provi 95.0 0.16 3.5E-06 45.3 9.1 79 197-278 2-90 (256)
441 PF13659 Methyltransf_26: Meth 95.0 0.094 2E-06 40.7 6.7 93 197-299 1-114 (117)
442 PRK07792 fabG 3-ketoacyl-(acyl 95.0 0.17 3.7E-06 46.7 9.4 82 196-278 11-99 (306)
443 PF10727 Rossmann-like: Rossma 95.0 0.11 2.4E-06 41.5 7.1 81 196-292 9-91 (127)
444 PRK06113 7-alpha-hydroxysteroi 94.9 0.15 3.3E-06 45.3 8.8 80 196-278 10-98 (255)
445 TIGR00417 speE spermidine synt 94.9 0.22 4.7E-06 45.3 9.8 103 195-301 71-187 (270)
446 PRK08293 3-hydroxybutyryl-CoA 94.9 0.24 5.2E-06 45.4 10.1 40 198-238 4-43 (287)
447 PF03721 UDPG_MGDP_dh_N: UDP-g 94.9 0.24 5.1E-06 42.4 9.4 95 198-302 1-121 (185)
448 PRK13243 glyoxylate reductase; 94.9 0.16 3.4E-06 47.8 8.9 37 196-233 149-185 (333)
449 PRK12936 3-ketoacyl-(acyl-carr 94.9 0.14 3E-06 45.1 8.2 80 196-278 5-90 (245)
450 PRK07666 fabG 3-ketoacyl-(acyl 94.9 0.16 3.5E-06 44.7 8.6 82 196-278 6-94 (239)
451 PRK10669 putative cation:proto 94.9 0.2 4.4E-06 50.4 10.3 95 198-300 418-515 (558)
452 TIGR02752 MenG_heptapren 2-hep 94.8 0.13 2.8E-06 45.3 8.0 100 190-301 39-152 (231)
453 PF01210 NAD_Gly3P_dh_N: NAD-d 94.8 0.065 1.4E-06 44.5 5.6 93 199-299 1-101 (157)
454 PRK09599 6-phosphogluconate de 94.8 0.34 7.4E-06 44.7 11.0 43 199-242 2-44 (301)
455 cd05291 HicDH_like L-2-hydroxy 94.8 0.31 6.8E-06 45.1 10.8 93 199-304 2-121 (306)
456 PLN02928 oxidoreductase family 94.8 0.21 4.5E-06 47.2 9.7 35 196-231 158-192 (347)
457 PF02558 ApbA: Ketopantoate re 94.8 0.054 1.2E-06 44.3 5.0 98 200-303 1-104 (151)
458 PRK12490 6-phosphogluconate de 94.8 0.34 7.4E-06 44.7 10.9 43 199-242 2-44 (299)
459 PRK06523 short chain dehydroge 94.8 0.13 2.8E-06 45.9 8.0 74 196-277 8-86 (260)
460 PF08704 GCD14: tRNA methyltra 94.8 0.087 1.9E-06 47.2 6.6 107 189-302 33-148 (247)
461 PF01408 GFO_IDH_MocA: Oxidore 94.8 0.74 1.6E-05 35.8 11.4 88 199-301 2-93 (120)
462 PRK10258 biotin biosynthesis p 94.8 0.27 5.9E-06 43.9 9.9 98 192-302 38-142 (251)
463 KOG1014 17 beta-hydroxysteroid 94.8 0.22 4.7E-06 45.7 9.1 81 195-278 47-136 (312)
464 COG0421 SpeE Spermidine syntha 94.8 0.26 5.6E-06 45.1 9.7 95 198-299 78-189 (282)
465 PRK06522 2-dehydropantoate 2-r 94.8 0.15 3.3E-06 46.8 8.5 93 199-301 2-101 (304)
466 PRK05447 1-deoxy-D-xylulose 5- 94.8 0.38 8.3E-06 45.7 11.1 90 198-292 2-115 (385)
467 PLN03075 nicotianamine synthas 94.8 0.2 4.3E-06 46.0 9.0 99 196-301 123-234 (296)
468 PRK15461 NADH-dependent gamma- 94.7 0.35 7.6E-06 44.6 10.8 43 199-242 3-45 (296)
469 TIGR02622 CDP_4_6_dhtase CDP-g 94.7 0.13 2.8E-06 48.3 8.1 76 196-278 3-85 (349)
470 cd05191 NAD_bind_amino_acid_DH 94.7 0.36 7.8E-06 35.6 8.9 35 195-229 21-55 (86)
471 TIGR01963 PHB_DH 3-hydroxybuty 94.7 0.18 3.9E-06 44.6 8.6 79 197-278 1-88 (255)
472 TIGR00452 methyltransferase, p 94.7 0.46 9.9E-06 44.2 11.4 102 185-299 110-224 (314)
473 PRK08655 prephenate dehydrogen 94.7 0.31 6.8E-06 47.5 10.8 87 199-301 2-93 (437)
474 PRK05650 short chain dehydroge 94.7 0.14 3E-06 46.1 7.9 77 199-278 2-87 (270)
475 PRK06849 hypothetical protein; 94.7 0.24 5.1E-06 47.5 9.8 95 196-292 3-100 (389)
476 KOG2018 Predicted dinucleotide 94.6 0.2 4.4E-06 45.8 8.4 115 195-314 72-213 (430)
477 PRK07578 short chain dehydroge 94.6 0.68 1.5E-05 39.5 11.8 88 199-304 2-115 (199)
478 PRK10792 bifunctional 5,10-met 94.6 0.29 6.3E-06 44.7 9.6 94 176-302 138-233 (285)
479 PRK01438 murD UDP-N-acetylmura 94.6 0.25 5.4E-06 48.7 10.1 71 195-279 14-89 (480)
480 TIGR00563 rsmB ribosomal RNA s 94.6 0.26 5.7E-06 47.9 10.0 101 190-299 232-367 (426)
481 PRK14189 bifunctional 5,10-met 94.6 0.27 5.9E-06 44.9 9.4 95 176-303 137-233 (285)
482 PRK00536 speE spermidine synth 94.6 0.15 3.3E-06 46.0 7.7 98 195-300 71-171 (262)
483 PLN02476 O-methyltransferase 94.6 0.41 8.9E-06 43.6 10.5 106 190-300 112-228 (278)
484 TIGR01289 LPOR light-dependent 94.6 0.23 4.9E-06 46.1 9.2 79 197-278 3-91 (314)
485 PRK13303 L-aspartate dehydroge 94.6 0.32 6.9E-06 44.1 9.9 85 199-298 3-90 (265)
486 PRK05557 fabG 3-ketoacyl-(acyl 94.5 0.25 5.3E-06 43.4 9.0 80 196-278 4-93 (248)
487 PRK11064 wecC UDP-N-acetyl-D-m 94.5 0.51 1.1E-05 45.7 11.8 74 198-279 4-86 (415)
488 PRK07066 3-hydroxybutyryl-CoA 94.5 0.48 1E-05 44.2 11.1 38 198-236 8-45 (321)
489 PRK13255 thiopurine S-methyltr 94.5 0.28 6E-06 43.1 9.1 99 193-298 34-153 (218)
490 PLN02233 ubiquinone biosynthes 94.5 0.42 9.1E-06 43.2 10.5 102 190-303 67-185 (261)
491 PLN02823 spermine synthase 94.5 0.33 7.3E-06 45.5 10.1 101 196-300 103-220 (336)
492 PLN00016 RNA-binding protein; 94.5 0.38 8.3E-06 45.8 10.8 98 196-302 51-166 (378)
493 COG1052 LdhA Lactate dehydroge 94.5 0.41 9E-06 44.7 10.6 36 196-232 145-180 (324)
494 PRK11188 rrmJ 23S rRNA methylt 94.5 0.58 1.3E-05 40.8 11.0 100 194-301 49-166 (209)
495 PRK09260 3-hydroxybutyryl-CoA 94.5 0.3 6.5E-06 44.7 9.7 40 198-238 2-41 (288)
496 PRK03612 spermidine synthase; 94.5 0.22 4.8E-06 49.7 9.4 96 195-300 296-415 (521)
497 PRK08063 enoyl-(acyl carrier p 94.5 0.15 3.3E-06 45.0 7.5 82 196-278 3-92 (250)
498 PRK05708 2-dehydropantoate 2-r 94.4 0.21 4.5E-06 46.3 8.6 100 198-302 3-106 (305)
499 PRK05855 short chain dehydroge 94.4 0.18 4E-06 50.4 8.8 80 196-278 314-402 (582)
500 PRK07775 short chain dehydroge 94.4 0.25 5.4E-06 44.6 8.9 82 196-278 9-97 (274)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=2.7e-61 Score=440.20 Aligned_cols=286 Identities=32% Similarity=0.500 Sum_probs=268.1
Q ss_pred cceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 043260 12 IYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 12 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
+++|||++++++++++++++++.|+|+++||+|+|+|+|+|++|++ +.|.++...+|+++|||.+|+|+++|++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 5799999999999999999999999999999999999999999999 999999988999999999999999999999999
Q ss_pred CCCEEEe-ecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCC
Q 043260 91 EGDIVIP-TFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSI 169 (332)
Q Consensus 91 vGdrV~~-~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~ 169 (332)
+||||.+ ++..+|++|.+|++|+|++|++.... |++.+|+ ||||+++++++++++|+++
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~--gy~~~GG------------------yaeyv~v~~~~~~~iP~~~ 140 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT--GYTTDGG------------------YAEYVVVPARYVVKIPEGL 140 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCcccc--ceeecCc------------------ceeEEEEchHHeEECCCCC
Confidence 9999988 89999999999999999999998877 8888886 9999999999999999999
Q ss_pred ChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCC
Q 043260 170 DLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 170 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 249 (332)
++++||.+.|+..|+|+++ +..+++||++|+|+|.|++|++++|+|+++|+ +|++++++++|+++++++|+|++++..
T Consensus 141 d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 141 DLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS 218 (339)
T ss_pred ChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC
Confidence 9999999999999999999 56899999999999999999999999999997 999999999999999999999999987
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCC-CCcccCChHhHhc-CcEEEEeeccc
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN-EAKVPLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~-~~~~~~~~~~~~~-~~~i~g~~~~~ 327 (332)
+ .+..+.+++. +|++||+++ +.++++.++.|+++ |+++.+|.+. .....++...++. +++|.||..++
T Consensus 219 ~---~~~~~~~~~~-----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~ 288 (339)
T COG1064 219 D---SDALEAVKEI-----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT 288 (339)
T ss_pred C---chhhHHhHhh-----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC
Confidence 6 6676777653 999999999 78999999999998 9999999995 4556677777776 99999999998
Q ss_pred cc
Q 043260 328 IK 329 (332)
Q Consensus 328 ~~ 329 (332)
+.
T Consensus 289 ~~ 290 (339)
T COG1064 289 RA 290 (339)
T ss_pred HH
Confidence 64
No 2
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3e-58 Score=412.20 Aligned_cols=314 Identities=42% Similarity=0.738 Sum_probs=300.0
Q ss_pred ceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 043260 13 YYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKE 91 (332)
Q Consensus 13 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 91 (332)
|++||++..++++||+++++++++|++||||||+.++|+|++|.. +.|..|.. +|.++|||.+|+|++||++|+.++|
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 578999999999999999999999999999999999999999999 99998876 9999999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCcccCCCCcccc-ccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 92 GDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 92 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
||+|+..+..+||+|.+|++|.+|.|+....+. .|...+|+.+++-++.+.+|.++.++|+||.+++..+++|++++.+
T Consensus 80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p 159 (366)
T COG1062 80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAP 159 (366)
T ss_pred CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCC
Confidence 999999999999999999999999999886554 7889999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD 250 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 250 (332)
++.++++.|...|.+.++.+.+++++|++|.|.|.|++|++++|-|+..|+.+||++|.+++|+++++++|+++++|.++
T Consensus 160 ~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~ 239 (366)
T COG1062 160 LEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE 239 (366)
T ss_pred ccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh
Confidence 99999999999999999989999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCc-hHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhcCcEEEEeecccc
Q 043260 251 EPNK-SISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIALGRNLKGTIFGGI 328 (332)
Q Consensus 251 ~~~~-~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~ 328 (332)
. +..+.+.++|++ |+|.+||++|+...+.++++++.++ |+.+++|.... +.+++++..|....+++|+.+|+.
T Consensus 240 ---~~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~~~~~-G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~ 314 (366)
T COG1062 240 ---VDDVVEAIVELTDG-GADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGA 314 (366)
T ss_pred ---hhhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHHHHHhcC-CeEEEEecCCCCceeecChHHeeccceEEEEeecCC
Confidence 5 699999999998 9999999999999999999999998 99999999887 778888888888999999999988
Q ss_pred ccCC
Q 043260 329 KTKS 332 (332)
Q Consensus 329 ~~~~ 332 (332)
++++
T Consensus 315 ~p~~ 318 (366)
T COG1062 315 RPRS 318 (366)
T ss_pred cccc
Confidence 8763
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.2e-56 Score=391.74 Aligned_cols=320 Identities=48% Similarity=0.805 Sum_probs=304.1
Q ss_pred cccceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 043260 10 LKIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKE 88 (332)
Q Consensus 10 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~ 88 (332)
..+.++||+++.++++||.++++.+++|+..||+||+.++++|++|.. +.|..+...+|.++|||++|+|+++|++|++
T Consensus 3 gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~ 82 (375)
T KOG0022|consen 3 GKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTT 82 (375)
T ss_pred CCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccc
Confidence 457899999999999999999999999999999999999999999999 9998888899999999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCcccCCCCcccc--ccccCCCCCcccccccceecccccCCceeeEEecCCceEEcC
Q 043260 89 LKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF--HGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVD 166 (332)
Q Consensus 89 ~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~--~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP 166 (332)
+++||+|.......|+.|.+|+++..|.|+...... .++..||..++.-.|+++||+.+..+|+||.+++...+++++
T Consensus 83 vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId 162 (375)
T KOG0022|consen 83 VKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID 162 (375)
T ss_pred cCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence 999999999999999999999999999999997665 555679999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeee
Q 043260 167 PSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFI 246 (332)
Q Consensus 167 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~ 246 (332)
+..+++.++++.|..+|.|.|..+.+++++|+++.|+|.|++|+++++-|++.|+.+||.+|.+++|.+.++++|+++++
T Consensus 163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~i 242 (375)
T KOG0022|consen 163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFI 242 (375)
T ss_pred CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhcCcEEEEeec
Q 043260 247 NPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIALGRNLKGTIF 325 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~g~~~ 325 (332)
|+.+ ....+.+.+.++|++ |+|+-|||+|+.+++.+++.+..++-|.-+++|.... +.+++++.+++.++++.|+.+
T Consensus 243 Np~d-~~~~i~evi~EmTdg-GvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~F 320 (375)
T KOG0022|consen 243 NPKD-LKKPIQEVIIEMTDG-GVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAF 320 (375)
T ss_pred Chhh-ccccHHHHHHHHhcC-CceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEec
Confidence 9984 334688899999998 9999999999999999999999986699999999888 889999999999999999999
Q ss_pred cccccC
Q 043260 326 GGIKTK 331 (332)
Q Consensus 326 ~~~~~~ 331 (332)
|+++++
T Consensus 321 GG~K~~ 326 (375)
T KOG0022|consen 321 GGFKSK 326 (375)
T ss_pred ccccch
Confidence 999876
No 4
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.5e-54 Score=381.21 Aligned_cols=300 Identities=26% Similarity=0.435 Sum_probs=272.1
Q ss_pred cccccceeeeEEEecCCC--CeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCC
Q 043260 8 SFLKIYYAAAVVCWGEGE--PWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGD 84 (332)
Q Consensus 8 ~~~~~~~~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~ 84 (332)
+...|.++++|.+..++. ++++.+++.|+|+++||+|+|+|+|||++|++ +.+.++...+|.++|||.+|+|+++|+
T Consensus 3 ~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs 82 (360)
T KOG0023|consen 3 SMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGS 82 (360)
T ss_pred cccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECC
Confidence 345689999999999988 46669999999999999999999999999999 999999999999999999999999999
Q ss_pred CCCCCCCCCEE-EeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceE
Q 043260 85 EVKELKEGDIV-IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVV 163 (332)
Q Consensus 85 ~v~~~~vGdrV-~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~ 163 (332)
+|++|++|||| +-....+|+.|.+|.+|+|+.|++...+..|+.+||+ .+.|+|++|+++++.+++
T Consensus 83 ~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt-------------~~~ggf~~~~~v~~~~a~ 149 (360)
T KOG0023|consen 83 NVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGT-------------ITQGGFQEYAVVDEVFAI 149 (360)
T ss_pred CcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCC-------------CccCccceeEEEeeeeEE
Confidence 99999999999 5577799999999999999999988777789999996 334789999999999999
Q ss_pred EcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc-chHHHHHHcCC
Q 043260 164 KVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP-CRKDKGEAFGM 242 (332)
Q Consensus 164 ~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~-~~~~~~~~lga 242 (332)
++|+++++++||.+.|+..|+|.+| +..++.||+++.|.|+|++|++++|+|+++|. +|++++++. +|.+..+.|||
T Consensus 150 kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGA 227 (360)
T KOG0023|consen 150 KIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGA 227 (360)
T ss_pred ECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCc
Confidence 9999999999999999999999998 67789999999999997799999999999999 999999998 66677788999
Q ss_pred CeeeCCC-CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEE
Q 043260 243 TDFINPD-DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNL 320 (332)
Q Consensus 243 ~~v~~~~-~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i 320 (332)
|..++.. + .+..+++.+.+++ ++|.|.+. ....+..++++++++ |++|++|.+. .++.++...++. .++|
T Consensus 228 d~fv~~~~d---~d~~~~~~~~~dg-~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~-~~~~~~~~~lil~~~~I 299 (360)
T KOG0023|consen 228 DVFVDSTED---PDIMKAIMKTTDG-GIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPE-KPLKLDTFPLILGRKSI 299 (360)
T ss_pred ceeEEecCC---HHHHHHHHHhhcC-cceeeeec--cccchHHHHHHhhcC-CEEEEEeCcC-CcccccchhhhcccEEE
Confidence 9988877 5 8888888888777 77777766 335789999999998 9999999999 488888888888 8899
Q ss_pred EEeecccccc
Q 043260 321 KGTIFGGIKT 330 (332)
Q Consensus 321 ~g~~~~~~~~ 330 (332)
.||.+|++++
T Consensus 300 ~GS~vG~~ke 309 (360)
T KOG0023|consen 300 KGSIVGSRKE 309 (360)
T ss_pred EeeccccHHH
Confidence 9999998764
No 5
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-52 Score=372.96 Aligned_cols=293 Identities=29% Similarity=0.425 Sum_probs=262.1
Q ss_pred cceeeeEEEecCCCCeEEEEEecCCC-CCCeEEEEEeeeecCccccc-ccCCCCC---CCCCcccccceeEEEEEeCCCC
Q 043260 12 IYYAAAVVCWGEGEPWKVEEIQVEPP-KATEVRFKMLYASICHTDVL-SSKGFPL---PLFPRVLGHEGVGMVESIGDEV 86 (332)
Q Consensus 12 ~~~~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~-~~g~~~~---~~~p~v~G~e~~G~Vv~vG~~v 86 (332)
..+|+|+++.+.++ +++++.|.|++ .|+||+|++.++|||++|++ +...... .+.|.++|||.+|+|.++|+.|
T Consensus 2 ~~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~V 80 (354)
T KOG0024|consen 2 AADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEV 80 (354)
T ss_pred CcccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccc
Confidence 35799999999998 99999999987 89999999999999999999 7765544 3589999999999999999999
Q ss_pred CCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcC
Q 043260 87 KELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVD 166 (332)
Q Consensus 87 ~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP 166 (332)
+++++||||++-|..+|+.|++|++|+.|+|++..+.+.+ ..+ |++++|++.+++.++|||
T Consensus 81 k~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atp-p~~------------------G~la~y~~~~~dfc~KLP 141 (354)
T KOG0024|consen 81 KHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATP-PVD------------------GTLAEYYVHPADFCYKLP 141 (354)
T ss_pred cccccCCeEEecCCCccccchhhhCcccccCCccccccCC-CcC------------------CceEEEEEechHheeeCC
Confidence 9999999999999999999999999999999999887433 122 459999999999999999
Q ss_pred CCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeee
Q 043260 167 PSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFI 246 (332)
Q Consensus 167 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~ 246 (332)
|++|++++|++. ++++++||. +++.+++|++|||+|+|++|+.+...|+++|+.+|++++..+.|+++++++|++.+.
T Consensus 142 d~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~ 219 (354)
T KOG0024|consen 142 DNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTD 219 (354)
T ss_pred CCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEe
Confidence 999999999887 899999998 789999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCC-CchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEee
Q 043260 247 NPDDEP-NKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTI 324 (332)
Q Consensus 247 ~~~~~~-~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~ 324 (332)
+..... .+.+.+.+....+...+|+.|||+|....++.++..++++ |++++.|+-. ...+|++.+... ++++.|++
T Consensus 220 ~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~-~~~~fpi~~v~~kE~~~~g~f 297 (354)
T KOG0024|consen 220 PSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGA-EEIQFPIIDVALKEVDLRGSF 297 (354)
T ss_pred eccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCC-CccccChhhhhhheeeeeeee
Confidence 665532 3555566666666567999999999988999999999998 9999999877 678888888777 99999998
Q ss_pred cccc
Q 043260 325 FGGI 328 (332)
Q Consensus 325 ~~~~ 328 (332)
-+..
T Consensus 298 ry~~ 301 (354)
T KOG0024|consen 298 RYCN 301 (354)
T ss_pred eecc
Confidence 7654
No 6
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.7e-48 Score=370.35 Aligned_cols=308 Identities=33% Similarity=0.578 Sum_probs=262.2
Q ss_pred eeeEEEecCC--------CCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCC
Q 043260 15 AAAVVCWGEG--------EPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDE 85 (332)
Q Consensus 15 ~~a~~~~~~~--------~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~ 85 (332)
|||+++.+++ +.+++++++.|+|+++||+|||.+++||++|+. +.|.++ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 7899998765 348999999999999999999999999999999 877654 357899999999999999999
Q ss_pred CCCCCCCCEEEeecccCCCCCcccccCCcccCCCCcccc-ccccCCCCCcccccccceecccccCCceeeEEecCCceEE
Q 043260 86 VKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVK 164 (332)
Q Consensus 86 v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~ 164 (332)
++++++||||++.+..+|+.|.+|++|.+++|.+..... .|...+|+.++..++...++..+.|+|+||+.++++.+++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~ 159 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVK 159 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEE
Confidence 999999999998888899999999999999998864321 2333333222222222122222236899999999999999
Q ss_pred cCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCe
Q 043260 165 VDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTD 244 (332)
Q Consensus 165 lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~ 244 (332)
+|+++++++|+.+++++.|||+++.+..++++|++|||.|+|++|++++|+++..|+.+|++++.+++|+++++++|+++
T Consensus 160 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~ 239 (371)
T cd08281 160 IDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATA 239 (371)
T ss_pred CCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCce
Confidence 99999999999999999999998877788999999999999999999999999999867999999999999999999999
Q ss_pred eeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhc-CcEEEE
Q 043260 245 FINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIAL-GRNLKG 322 (332)
Q Consensus 245 v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~-~~~i~g 322 (332)
++++.+ +++.+.+++++++ ++|+|||++|....+..++++++++ |+++.+|.... ...+++...++. +++|.|
T Consensus 240 ~i~~~~---~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g 314 (371)
T cd08281 240 TVNAGD---PNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKG 314 (371)
T ss_pred EeCCCc---hhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEE
Confidence 999877 7788888888877 8999999999877899999999998 99999998754 456778777776 999999
Q ss_pred eecccc
Q 043260 323 TIFGGI 328 (332)
Q Consensus 323 ~~~~~~ 328 (332)
++.+++
T Consensus 315 ~~~~~~ 320 (371)
T cd08281 315 SYMGSC 320 (371)
T ss_pred EecCCC
Confidence 987754
No 7
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.5e-48 Score=372.06 Aligned_cols=318 Identities=47% Similarity=0.844 Sum_probs=264.1
Q ss_pred cccccceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCC-CCCCCcccccceeEEEEEeCCC
Q 043260 8 SFLKIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFP-LPLFPRVLGHEGVGMVESIGDE 85 (332)
Q Consensus 8 ~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~-~~~~p~v~G~e~~G~Vv~vG~~ 85 (332)
+.+.+++|||++++++++++.+++++.|+|+++||+|||+++|||++|+. +.|..+ ...+|.++|||++|+|+++|++
T Consensus 4 ~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~ 83 (381)
T PLN02740 4 TQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEG 83 (381)
T ss_pred ccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCC
Confidence 45678999999999998779999999999999999999999999999999 877653 2467999999999999999999
Q ss_pred CCCCCCCCEEEeecccCCCCCcccccCCcccCCCCcccccccc----CCCCCcccc--cccceecccccCCceeeEEecC
Q 043260 86 VKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLM----PDGSSRMSI--RGQKLYHIFTCSTMTEYMVVDA 159 (332)
Q Consensus 86 v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~----~~g~~~~~~--~~~~~~~~~~~G~~a~~~~v~~ 159 (332)
+++|++||||++.+..+|+.|.+|++|.++.|++.... ++. .+|...+.. .+...++....|+|+||+.++.
T Consensus 84 v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~ 161 (381)
T PLN02740 84 VEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVD--PFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDS 161 (381)
T ss_pred CCcCCCCCEEEecCCCCCCCChhhcCCCcccccCcccc--ccccccccCCCcccccccCCCcccccccCccceeEEEEeh
Confidence 99999999999999999999999999999999986532 110 011100000 0001112223478999999999
Q ss_pred CceEEcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH
Q 043260 160 NYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA 239 (332)
Q Consensus 160 ~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~ 239 (332)
+.++++|+++++++++.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|++++++
T Consensus 162 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~ 241 (381)
T PLN02740 162 ACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE 241 (381)
T ss_pred HHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH
Confidence 99999999999999999999999999988777899999999999999999999999999998679999999999999999
Q ss_pred cCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhcCc
Q 043260 240 FGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIALGR 318 (332)
Q Consensus 240 lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~~~ 318 (332)
+|++.+++..+ ...++.+.+++++++ ++|+|||++|++..+..+++++++++|+++.+|.... ..++++...++.++
T Consensus 242 ~Ga~~~i~~~~-~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~ 319 (381)
T PLN02740 242 MGITDFINPKD-SDKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGR 319 (381)
T ss_pred cCCcEEEeccc-ccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCC
Confidence 99999998764 112477778888877 8999999999988899999999883399999998764 33556665555689
Q ss_pred EEEEeeccccc
Q 043260 319 NLKGTIFGGIK 329 (332)
Q Consensus 319 ~i~g~~~~~~~ 329 (332)
+|.|++.+++.
T Consensus 320 ~i~g~~~~~~~ 330 (381)
T PLN02740 320 SITGSVFGDFK 330 (381)
T ss_pred eEEEEecCCCC
Confidence 99999887653
No 8
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=3e-48 Score=368.25 Aligned_cols=311 Identities=43% Similarity=0.782 Sum_probs=259.8
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGD 93 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 93 (332)
|||+++..++++++++++|.|+|+++||+|||+++|+|++|+. +.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 8999999888779999999999999999999999999999999 877765556899999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCcccCCCCcccc-ccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChh
Q 043260 94 IVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLS 172 (332)
Q Consensus 94 rV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~ 172 (332)
||++.+..+|+.|++|+.|++++|++..... .|+..+|...+..+|...++....|+|+||+.++.+.++++|++++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~ 161 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLE 161 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHH
Confidence 9999999999999999999999999854221 244333322222222222333334789999999999999999999999
Q ss_pred hhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCC
Q 043260 173 LAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEP 252 (332)
Q Consensus 173 ~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 252 (332)
+++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|++.+++..+ .
T Consensus 162 ~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~-~ 240 (368)
T TIGR02818 162 EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND-Y 240 (368)
T ss_pred HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc-c
Confidence 999999999999999877889999999999999999999999999999867999999999999999999999998763 1
Q ss_pred CchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhcCcEEEEeeccc
Q 043260 253 NKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIALGRNLKGTIFGG 327 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~ 327 (332)
..++.+.+++++++ ++|++||++|++..+.++++++++++|+++.+|.... ...+++...++.+..+.|+..+.
T Consensus 241 ~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 315 (368)
T TIGR02818 241 DKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGG 315 (368)
T ss_pred chhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccC
Confidence 13466778888876 8999999999877889999999874499999998653 34555666555566678876543
No 9
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1.9e-47 Score=362.86 Aligned_cols=315 Identities=48% Similarity=0.858 Sum_probs=264.4
Q ss_pred ceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 043260 13 YYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKE 91 (332)
Q Consensus 13 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 91 (332)
|+|||+++.++++++++++++.|+|+++||+|||.+++||++|+. +.|..+...+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 489999999888789999999999999999999999999999999 8777655678999999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCcccCCCCcccc-ccccC-CCCCcccccccceecccccCCceeeEEecCCceEEcCCCC
Q 043260 92 GDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMP-DGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSI 169 (332)
Q Consensus 92 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~-~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~ 169 (332)
||||+..+..+|++|.+|++|.+++|.+..... .|... ++...+...|...++....|+|+||+.++...++++|+++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 999999999999999999999999999864321 12211 1111111122223333345789999999999999999999
Q ss_pred ChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCC
Q 043260 170 DLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 170 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 249 (332)
++++++++++++.|+|+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.++++.
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~ 240 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence 99999999999999999887788999999999999999999999999999986799999999999999999999999876
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhcCcEEEEeecccc
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIALGRNLKGTIFGGI 328 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~ 328 (332)
+ ..+++.+.+++++++ ++|++||++|....+..+++++++++|+++.+|.... ...++++..++.+++|.|+..+++
T Consensus 241 ~-~~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 318 (369)
T cd08301 241 D-HDKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGY 318 (369)
T ss_pred c-cchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCC
Confidence 4 113466677777776 8999999999877889999999993299999998764 456677665666999999988765
Q ss_pred c
Q 043260 329 K 329 (332)
Q Consensus 329 ~ 329 (332)
.
T Consensus 319 ~ 319 (369)
T cd08301 319 K 319 (369)
T ss_pred C
Confidence 3
No 10
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=2.5e-47 Score=361.94 Aligned_cols=314 Identities=47% Similarity=0.801 Sum_probs=261.9
Q ss_pred ceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 043260 13 YYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKE 91 (332)
Q Consensus 13 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 91 (332)
.+|||+++..++++++++++|.|+|+++||+|||+++++|++|+. +.+.++...+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~v 80 (368)
T cd08300 1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKP 80 (368)
T ss_pred CcceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCC
Confidence 368999998887779999999999999999999999999999999 8777665678999999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCcccCCCCcccc-ccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 92 GDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 92 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
||||+..+..+|+.|.+|++|+++.|.+..... .|...+|...+..+|...++....|+|+||+.++.+.++++|++++
T Consensus 81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 81 GDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 999999999999999999999999998864211 2333333211111222223333357899999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD 250 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 250 (332)
+++++++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|+++++++++
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 99999999999999998877788999999999999999999999999999867999999999999999999999998865
Q ss_pred CCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhcCcEEEEeecccc
Q 043260 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIALGRNLKGTIFGGI 328 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~ 328 (332)
..+++.+.+.+++++ ++|+|||++|+...+.++++++++++|+++.+|.... ....++...+..+..+.|+..+++
T Consensus 241 -~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 317 (368)
T cd08300 241 -HDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGW 317 (368)
T ss_pred -cchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEeccc
Confidence 112577788888877 8999999999877899999999874399999998743 334555555555667788776654
No 11
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=2.8e-47 Score=361.30 Aligned_cols=314 Identities=53% Similarity=0.928 Sum_probs=266.5
Q ss_pred ceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 043260 13 YYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKE 91 (332)
Q Consensus 13 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 91 (332)
+.|||+++.+.+++++++++|.|+++++||+|||+++++|++|+. +.|..+ ..+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 478999999887779999999999999999999999999999999 777654 467899999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCCh
Q 043260 92 GDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDL 171 (332)
Q Consensus 92 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~ 171 (332)
||||+..+..+|+.|.+|++|.+++|++..+...|+..++.......|...++....|+|+||+.++++.++++|+++++
T Consensus 80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~ 159 (365)
T cd08277 80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPL 159 (365)
T ss_pred CCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCH
Confidence 99999999999999999999999999997655445555443222222333333333578999999999999999999999
Q ss_pred hhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCC
Q 043260 172 SLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDE 251 (332)
Q Consensus 172 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 251 (332)
++++++++++.|||+++.+..++++|++|||+|+|++|++++|+++.+|+.+|++++++++|++.++++|++++++..+
T Consensus 160 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~- 238 (365)
T cd08277 160 EHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD- 238 (365)
T ss_pred HHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccc-
Confidence 9999999999999998877889999999999999999999999999999867999999999999999999999998764
Q ss_pred CCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhcCcEEEEeeccccc
Q 043260 252 PNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIALGRNLKGTIFGGIK 329 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 329 (332)
...++.+.++++++ .++|+|||++|+...+..+++++++++|+++.+|...+...++++..++.+++|.|++.+++.
T Consensus 239 ~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 315 (365)
T cd08277 239 SDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLILGRTWKGSFFGGFK 315 (365)
T ss_pred ccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhhCCEEEeeecCCCC
Confidence 11235667777777 489999999998778899999998733999999987543456777677679999999887653
No 12
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=3.9e-47 Score=359.39 Aligned_cols=300 Identities=30% Similarity=0.516 Sum_probs=258.1
Q ss_pred eeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 14 YAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 14 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
||||+++++++++++++++|.|+|+++||+|||.++++|++|+. +.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence 69999999998889999999999999999999999999999999 777543 3578999999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCcccCCCCcccccccc-CCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCCh
Q 043260 93 DIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLM-PDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDL 171 (332)
Q Consensus 93 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~ 171 (332)
|||++.+..+|+.|.+|++|++++|........... .+|. ........|+|+||+.++++.++++|+++++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~--------~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~ 151 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGT--------ELSPALGIGAFAEKTLVHAGQCTKVDPAADP 151 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCc--------ccccccccccccceEEEehhheEECCCCCCh
Confidence 999999999999999999999999986432110000 0110 0000112367999999999999999999999
Q ss_pred hhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCC
Q 043260 172 SLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDE 251 (332)
Q Consensus 172 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 251 (332)
++++.+++++.++|+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++.+
T Consensus 152 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~- 230 (358)
T TIGR03451 152 AAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG- 230 (358)
T ss_pred hHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC-
Confidence 9999999999999988777788999999999999999999999999999856999999999999999999999999876
Q ss_pred CCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhc-CcEEEEeecc
Q 043260 252 PNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIAL-GRNLKGTIFG 326 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~-~~~i~g~~~~ 326 (332)
+++.+.+.+.+++.++|+|||++|+++.+..++++++++ |+++.+|.... ...++++..++. +++|.+++.+
T Consensus 231 --~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 304 (358)
T TIGR03451 231 --TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYG 304 (358)
T ss_pred --cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecC
Confidence 778888888888878999999999877899999999998 99999998754 346677766666 8999998754
No 13
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=5.8e-47 Score=355.27 Aligned_cols=285 Identities=27% Similarity=0.463 Sum_probs=248.7
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
|||+++++++. +++++++.|+|+++||+||+.++++|++|+. +.+.+.. ..+|.++|||++|+|+++|++|+++++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 79999998765 9999999999999999999999999999999 7665432 3358899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChh
Q 043260 93 DIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLS 172 (332)
Q Consensus 93 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~ 172 (332)
|||+..+..+|+.|.+|++|++++|.+... ..|...+| +|+||+.++.+.++++|++++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~-~~g~~~~G------------------~~ae~~~v~~~~~~~~P~~~~~~ 140 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA-AYGWNRDG------------------GHAEYMLVPEKTLIPLPDDLSFA 140 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc-ccccCCCC------------------cceeEEEechHHeEECCCCCCHH
Confidence 999999999999999999999999987653 12444444 59999999999999999999999
Q ss_pred hhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCC
Q 043260 173 LAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEP 252 (332)
Q Consensus 173 ~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 252 (332)
+|+++++++.|||+++ ....+++|++|||+|+|++|++++|+++.+|+++|++++++++|++.++++|++.++++++
T Consensus 141 ~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~-- 217 (339)
T cd08239 141 DGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ-- 217 (339)
T ss_pred HhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--
Confidence 9999999999999998 5678899999999999999999999999999944999999999999999999999999876
Q ss_pred CchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCCh-HhHh-cCcEEEEeeccc
Q 043260 253 NKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNF-PAIA-LGRNLKGTIFGG 327 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~-~~~~-~~~~i~g~~~~~ 327 (332)
.+ .+.+.+++++.++|+|||++|+...+..++++++++ |+++.+|..... +++. ..++ ++++|.|++.++
T Consensus 218 -~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~ 289 (339)
T cd08239 218 -DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYFS 289 (339)
T ss_pred -ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecCC
Confidence 55 667777787778999999999977778999999998 999999986542 3333 2344 499999998764
No 14
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.3e-46 Score=358.24 Aligned_cols=317 Identities=42% Similarity=0.787 Sum_probs=257.3
Q ss_pred eecccccceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCC
Q 043260 6 HISFLKIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGD 84 (332)
Q Consensus 6 ~~~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~ 84 (332)
+++.|....|||++++++.+.+++++++.|+|+++||+|||.++|+|++|+. +.+.. .+|.++|||++|+|+++|+
T Consensus 4 ~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~ 80 (378)
T PLN02827 4 SISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGE 80 (378)
T ss_pred cccCcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCC
Confidence 4566666789999999988779999999999999999999999999999999 76542 4688999999999999999
Q ss_pred CCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCC-CCCcccccccceecccccCCceeeEEecCCceE
Q 043260 85 EVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPD-GSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVV 163 (332)
Q Consensus 85 ~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~-g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~ 163 (332)
++++|++||||+..+..+|++|.+|++|++++|++......|.... ....+...|...++....|+|+||+.++++.++
T Consensus 81 ~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~ 160 (378)
T PLN02827 81 GVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (378)
T ss_pred CCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheE
Confidence 9999999999999999999999999999999998853221122110 000000000000111123689999999999999
Q ss_pred EcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCC
Q 043260 164 KVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMT 243 (332)
Q Consensus 164 ~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~ 243 (332)
++|+++++++++.+.+++.++|+++.+..++++|++|||+|+|++|++++|+++.+|++.|++++++++|+++++++|++
T Consensus 161 ~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~ 240 (378)
T PLN02827 161 KVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVT 240 (378)
T ss_pred ECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc
Confidence 99999999999999889899998877778899999999999999999999999999986688899899999999999999
Q ss_pred eeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCCh-HhHh-cCcEEE
Q 043260 244 DFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNF-PAIA-LGRNLK 321 (332)
Q Consensus 244 ~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~-~~~~-~~~~i~ 321 (332)
+++++++ ..+++.+.+++++++ ++|+|||++|....+..+++.+++++|+++.+|.+.. ...++. ..++ ++++|.
T Consensus 241 ~~i~~~~-~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~ 317 (378)
T PLN02827 241 DFINPND-LSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA-KPEVSAHYGLFLSGRTLK 317 (378)
T ss_pred EEEcccc-cchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC-CccccccHHHHhcCceEE
Confidence 9998764 113567778888876 8999999999977889999999985499999998763 234443 2344 499999
Q ss_pred Eeecccc
Q 043260 322 GTIFGGI 328 (332)
Q Consensus 322 g~~~~~~ 328 (332)
|+..+.+
T Consensus 318 g~~~~~~ 324 (378)
T PLN02827 318 GSLFGGW 324 (378)
T ss_pred eeecCCC
Confidence 9987654
No 15
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.9e-46 Score=352.80 Aligned_cols=290 Identities=27% Similarity=0.402 Sum_probs=239.5
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCc-ccccceeEEEEEeCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPR-VLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~-v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
|++++++.+++...+++.+.|.+.++||+|||.++|||+||++ +.+..+....|. ++|||++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 6778888777645577777777889999999999999999999 988877766666 99999999999999 77889999
Q ss_pred CEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCC-ceEEcCCCCCh
Q 043260 93 DIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN-YVVKVDPSIDL 171 (332)
Q Consensus 93 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~-~v~~lP~~~~~ 171 (332)
|||++.|..+|++|++|++|.+++|++..+. |....+. ...|+|+||+.+|.+ .+.++|+++ .
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~--g~~~~~~-------------~~~G~~aEyv~vp~~~~~~~~pd~~-~ 143 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFY--GYAGLGG-------------GIDGGFAEYVRVPADFNLAKLPDGI-D 143 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCcccc--ccccccC-------------CCCCceEEEEEeccccCeecCCCCC-C
Confidence 9999999999999999999999999976533 2221110 012459999999965 555558888 4
Q ss_pred hhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH-cCCCeeeCCCC
Q 043260 172 SLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA-FGMTDFINPDD 250 (332)
Q Consensus 172 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~ 250 (332)
.+++++..++++++++........++++|+|+|+|++|++++++++.+|+.+||++|.+++|++++++ .|++.+++...
T Consensus 144 ~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~ 223 (350)
T COG1063 144 EEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE 223 (350)
T ss_pred hhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc
Confidence 55555666999998764455556667799999999999999999999999999999999999999999 66676766655
Q ss_pred CCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeec
Q 043260 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIF 325 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~ 325 (332)
++....+.+++++.|+|++|||+|...++.++++.++++ |+++++|........++...+.. +++|.|++.
T Consensus 224 ---~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~ 295 (350)
T COG1063 224 ---DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLR 295 (350)
T ss_pred ---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccCccCHHHHHhcccEEEeccC
Confidence 466777888898899999999999998999999999998 99999999985222677777666 999999954
No 16
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.8e-45 Score=346.10 Aligned_cols=285 Identities=24% Similarity=0.328 Sum_probs=237.9
Q ss_pred ceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-cc-CCCC--CCCCCcccccceeEEEEEeCCCCCC
Q 043260 13 YYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SS-KGFP--LPLFPRVLGHEGVGMVESIGDEVKE 88 (332)
Q Consensus 13 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~-g~~~--~~~~p~v~G~e~~G~Vv~vG~~v~~ 88 (332)
..+|+++++++++ +++++.+.| +.++||||||.++|||++|++ +. +..+ ...+|.++|||++|+|+++ ++++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 4689999998887 999999997 688999999999999999998 65 3322 2467999999999999999 7889
Q ss_pred CCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCC
Q 043260 89 LKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPS 168 (332)
Q Consensus 89 ~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~ 168 (332)
|++||||++.+..+|+.|.+|++|++++|++..+. |..... ....|+|+||+.++++.++++|++
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~--g~~~~~-------------~~~~G~~aey~~v~~~~~~~~P~~ 143 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFF--GSAMYF-------------PHVDGGFTRYKVVDTAQCIPYPEK 143 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCccee--eccccc-------------CCCCCceeeeEEechHHeEECCCC
Confidence 99999999999999999999999999999986543 321000 001256999999999999999999
Q ss_pred CChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCC
Q 043260 169 IDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINP 248 (332)
Q Consensus 169 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 248 (332)
+++++++.. .++.+||+++. .....+|++|+|+|+|++|++++|+++.+|+++|++++++++|+++++++|+++++++
T Consensus 144 l~~~~aa~~-~~~~~a~~al~-~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~ 221 (343)
T PRK09880 144 ADEKVMAFA-EPLAVAIHAAH-QAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNP 221 (343)
T ss_pred CCHHHHHhh-cHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 999876644 58889999884 4566789999999999999999999999999779999999999999999999999998
Q ss_pred CCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeecc
Q 043260 249 DDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFG 326 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~ 326 (332)
.+ +++.+.. +. .+ ++|+|||++|++..+..++++++++ |+++.+|... ...++++..++. ++++.|+...
T Consensus 222 ~~---~~~~~~~-~~-~g-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~k~~~i~g~~~~ 292 (343)
T PRK09880 222 QN---DDLDHYK-AE-KG-YFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGG-APPEFPMMTLIVKEISLKGSFRF 292 (343)
T ss_pred Cc---ccHHHHh-cc-CC-CCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC-CCCccCHHHHHhCCcEEEEEeec
Confidence 76 5544322 22 22 6999999999977889999999998 9999999865 445777777766 9999998643
No 17
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=5.4e-45 Score=344.94 Aligned_cols=295 Identities=24% Similarity=0.408 Sum_probs=244.4
Q ss_pred ccccceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCC
Q 043260 9 FLKIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVK 87 (332)
Q Consensus 9 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~ 87 (332)
..-||+++++.+++..+.+++.+++.|+|+++||+|||.++|||++|++ +.+.++...+|.++|||++|+|+++|++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~ 86 (360)
T PLN02586 7 EEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVK 86 (360)
T ss_pred hhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCC
Confidence 3457888899998887779999999999999999999999999999999 777655456799999999999999999999
Q ss_pred CCCCCCEEEeecc-cCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcC
Q 043260 88 ELKEGDIVIPTFI-GECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVD 166 (332)
Q Consensus 88 ~~~vGdrV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP 166 (332)
+|++||||++.+. .+|+.|.+|++|+++.|++..+...++..+|. ...|+|+||+.++.+.++++|
T Consensus 87 ~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~-------------~~~G~~aey~~v~~~~~~~lP 153 (360)
T PLN02586 87 KFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGT-------------KNYGGYSDMIVVDQHFVLRFP 153 (360)
T ss_pred ccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCC-------------cCCCccceEEEEchHHeeeCC
Confidence 9999999986554 58999999999999999986533111100111 012469999999999999999
Q ss_pred CCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcch-HHHHHHcCCCee
Q 043260 167 PSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCR-KDKGEAFGMTDF 245 (332)
Q Consensus 167 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~-~~~~~~lga~~v 245 (332)
+++++++++.+++++.|+|+++.+...+++|++|||.|+|++|++++|+|+.+|+ +|++++.++++ .+.++++|++.+
T Consensus 154 ~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~v 232 (360)
T PLN02586 154 DNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSF 232 (360)
T ss_pred CCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEE
Confidence 9999999999999999999988666667899999999999999999999999999 78887776665 456789999999
Q ss_pred eCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEee
Q 043260 246 INPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTI 324 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~ 324 (332)
++..+ . +.+++.++ ++|+|||++|+...+.+++++++++ |+++.+|... ....+++..++. ++.+.|+.
T Consensus 233 i~~~~---~---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~ 302 (360)
T PLN02586 233 LVSTD---P---EKMKAAIG--TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPE-KPLELPIFPLVLGRKLVGGSD 302 (360)
T ss_pred EcCCC---H---HHHHhhcC--CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCC-CCCccCHHHHHhCCeEEEEcC
Confidence 98754 2 24555553 6999999999877889999999998 9999999765 346677776666 77888887
Q ss_pred ccc
Q 043260 325 FGG 327 (332)
Q Consensus 325 ~~~ 327 (332)
.++
T Consensus 303 ~~~ 305 (360)
T PLN02586 303 IGG 305 (360)
T ss_pred cCC
Confidence 654
No 18
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=5e-45 Score=339.29 Aligned_cols=264 Identities=28% Similarity=0.400 Sum_probs=234.8
Q ss_pred eeeEEEecCCCC--eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCC-CCCCCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEGEP--WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKG-FPLPLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~-~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
||+++++..+.+ ++++++|.|+|++|||||||++++||+.|.. +.|. .+..++|.++|.|++|+|+++|++|+.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 788999877755 8899999999999999999999999999999 8875 44467999999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||||+..+ .. + . .|+|+||+.+|++.++++|++++
T Consensus 81 ~GdrV~~~~-~~-----------------------~--~------------------~G~~AEy~~v~a~~~~~~P~~ls 116 (326)
T COG0604 81 VGDRVAALG-GV-----------------------G--R------------------DGGYAEYVVVPADWLVPLPDGLS 116 (326)
T ss_pred CCCEEEEcc-CC-----------------------C--C------------------CCcceeEEEecHHHceeCCCCCC
Confidence 999998542 00 0 1 35699999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 249 (332)
+++||++++++.|||+++.+..++++|++|||+|+ |++|.+++|+|+.+|+ .++++..++++.++++++|+|++++++
T Consensus 117 ~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~ 195 (326)
T COG0604 117 FEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYR 195 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCC
Confidence 99999999999999999988899999999999987 9999999999999998 677777777777799999999999999
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCC-CCcccCChHhHhc-CcEEEEeeccc
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN-EAKVPLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~-~~~~~~~~~~~~~-~~~i~g~~~~~ 327 (332)
+ .++.+.++++++++++|+|+|++|+ +.+..++++|+++ |+++.+|... ....+++...++. .+++.|+....
T Consensus 196 ~---~~~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~ 270 (326)
T COG0604 196 E---EDFVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGS 270 (326)
T ss_pred c---ccHHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEeccee
Confidence 8 8899999999999999999999999 5888999999999 9999999988 4667777666665 88888887664
Q ss_pred c
Q 043260 328 I 328 (332)
Q Consensus 328 ~ 328 (332)
.
T Consensus 271 ~ 271 (326)
T COG0604 271 R 271 (326)
T ss_pred c
Confidence 4
No 19
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=6.2e-45 Score=347.85 Aligned_cols=269 Identities=27% Similarity=0.387 Sum_probs=225.8
Q ss_pred eeeeEEEecCCCCeEEEEEecCCCC-------CCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCC
Q 043260 14 YAAAVVCWGEGEPWKVEEIQVEPPK-------ATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDE 85 (332)
Q Consensus 14 ~~~a~~~~~~~~~l~~~~~~~p~~~-------~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~ 85 (332)
-|||++++++++ ++++++|.|+|+ +|||||||+++|||++|++ +.|..+ ..+|.++|||++|+|+++|++
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD 79 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence 389999999886 999999999874 6899999999999999999 877543 357899999999999999999
Q ss_pred CCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccc----cccccCCCCCcccccccceecccccCCceeeEEecCC-
Q 043260 86 VKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFT----FHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN- 160 (332)
Q Consensus 86 v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~----~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~- 160 (332)
|++|++||||++.+..+|+.|++|++|++++|++.... ..|+...| ...|+|+||+.++..
T Consensus 80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~--------------~~~G~~aey~~v~~~~ 145 (393)
T TIGR02819 80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG--------------GWVGGQSEYVMVPYAD 145 (393)
T ss_pred cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC--------------CCCCceEEEEEechhh
Confidence 99999999999999999999999999999999975321 01221100 013569999999963
Q ss_pred -ceEEcCCCCCh----hhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHH
Q 043260 161 -YVVKVDPSIDL----SLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKD 235 (332)
Q Consensus 161 -~v~~lP~~~~~----~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~ 235 (332)
.++++|++++. .+++.+.+++.++|+++ +..++++|++|||.|+|++|++++|+|+.+|++.|++++++++|++
T Consensus 146 ~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~ 224 (393)
T TIGR02819 146 FNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLA 224 (393)
T ss_pred CceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 79999998754 35677778899999987 4678999999999989999999999999999956777788889999
Q ss_pred HHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCCh--------------HHHHHHHHHhccCCcEEEEEcC
Q 043260 236 KGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVA--------------SLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 236 ~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~--------------~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
+++++|++.+....+ .++.+.+.+++++.++|++||++|.+ .++.+++++++++ |+++.+|.
T Consensus 225 ~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~ 300 (393)
T TIGR02819 225 QARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGL 300 (393)
T ss_pred HHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeee
Confidence 999999975443333 45677788888877899999999985 4799999999998 99999998
Q ss_pred CC
Q 043260 302 AN 303 (332)
Q Consensus 302 ~~ 303 (332)
+.
T Consensus 301 ~~ 302 (393)
T TIGR02819 301 YV 302 (393)
T ss_pred cC
Confidence 63
No 20
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=8e-44 Score=335.60 Aligned_cols=285 Identities=25% Similarity=0.373 Sum_probs=246.7
Q ss_pred EEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCC-CCCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 043260 18 VVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKG-FPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIV 95 (332)
Q Consensus 18 ~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~-~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdrV 95 (332)
+++++++++++++++|.|+|+++||+|||.++++|++|++ +.+. .+...+|.++|||++|+|+++|++++.+ +||||
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 4677777668999999999999999999999999999998 5443 3334678999999999999999999887 99999
Q ss_pred EeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCC------CC
Q 043260 96 IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDP------SI 169 (332)
Q Consensus 96 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~------~~ 169 (332)
++.+..+|+.|.+|++|.+++|.+..+. |...+| +|+||+.++.+.++++|+ ++
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~~--g~~~~G------------------~~ae~~~v~~~~~~~ip~~~~~~~~~ 140 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKMP--GNDMQG------------------GFASHIVVPAKGLCVVDEARLAAAGL 140 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCcc--CcCCCC------------------cccceEEechHHeEECCcccccccCC
Confidence 9999999999999999999999876543 443344 599999999999999999 89
Q ss_pred ChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCC
Q 043260 170 DLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 170 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 249 (332)
++++++.+++++.++|+++. ...+++|++|+|+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++.++++.
T Consensus 141 ~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~ 218 (349)
T TIGR03201 141 PLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPK 218 (349)
T ss_pred CHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCc
Confidence 99999999999999999884 5789999999999999999999999999999 899999999999999999999999876
Q ss_pred CCCCchHHHHHHHhcCCCCcc----EEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEee
Q 043260 250 DEPNKSISELVKEMTHGTGVD----YGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTI 324 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d----~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~ 324 (332)
+...+++.+.++++++++|+| +||||+|+...+..++++++++ |+++.+|... ...++++..++. ++++.|++
T Consensus 219 ~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~~g~~ 296 (349)
T TIGR03201 219 DKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTM-AKTEYRLSNLMAFHARALGNW 296 (349)
T ss_pred cccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCC-CCcccCHHHHhhcccEEEEEe
Confidence 522236777788888888887 8999999987888999999998 9999999876 345677777666 88999987
Q ss_pred ccc
Q 043260 325 FGG 327 (332)
Q Consensus 325 ~~~ 327 (332)
.++
T Consensus 297 ~~~ 299 (349)
T TIGR03201 297 GCP 299 (349)
T ss_pred cCC
Confidence 543
No 21
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.6e-43 Score=336.29 Aligned_cols=292 Identities=22% Similarity=0.395 Sum_probs=237.4
Q ss_pred ceeeeE--EEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 043260 13 YYAAAV--VCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKEL 89 (332)
Q Consensus 13 ~~~~a~--~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~ 89 (332)
.+.||+ ++++..+.+++.+++.|+|+++||+|||.++|||++|++ +.|.++...+|.++|||++|+|+++|+++++|
T Consensus 3 ~~~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~ 82 (375)
T PLN02178 3 DQNKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKF 82 (375)
T ss_pred ccceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCcc
Confidence 344554 445554568889999999999999999999999999999 87765444578999999999999999999999
Q ss_pred CCCCEEEeeccc-CCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCC
Q 043260 90 KEGDIVIPTFIG-ECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPS 168 (332)
Q Consensus 90 ~vGdrV~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~ 168 (332)
++||||++.+.. +|+.|++|++|++++|++..+...+....|. ...|+|+||+.++++.++++|++
T Consensus 83 ~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~-------------~~~G~~aey~~v~~~~~~~lP~~ 149 (375)
T PLN02178 83 KEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGT-------------RNQGGYSDVIVVDHRFVLSIPDG 149 (375)
T ss_pred CCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCC-------------cCCCccccEEEEchHHeEECCCC
Confidence 999999876665 6999999999999999986532110000010 01256999999999999999999
Q ss_pred CChhhhhhcccchhhhHHHHHHhhC-CCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcch-HHHHHHcCCCeee
Q 043260 169 IDLSLAGFLSCGYSSGFGAAWKEFK-VEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCR-KDKGEAFGMTDFI 246 (332)
Q Consensus 169 ~~~~~aa~l~~~~~ta~~al~~~~~-~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~-~~~~~~lga~~v~ 246 (332)
++++++++++++..|+|+++..... .++|++|+|.|+|++|++++|+|+.+|+ +|++++.++++ +++++++|+++++
T Consensus 150 ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i 228 (375)
T PLN02178 150 LPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFL 228 (375)
T ss_pred CCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEE
Confidence 9999999999999999998744332 3689999999999999999999999999 78888876554 6788999999999
Q ss_pred CCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeec
Q 043260 247 NPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIF 325 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~ 325 (332)
++.+ . +.+.+.++ ++|+|||++|....+..++++++++ |+++.+|... ...++++..++. +++|.|+..
T Consensus 229 ~~~~---~---~~v~~~~~--~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~ 298 (375)
T PLN02178 229 VTTD---S---QKMKEAVG--TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPE-KPLDLPIFPLVLGRKMVGGSQI 298 (375)
T ss_pred cCcC---H---HHHHHhhC--CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCC-CCCccCHHHHHhCCeEEEEeCc
Confidence 8754 2 34555553 6999999999877889999999998 9999999875 446677777766 999999887
Q ss_pred ccc
Q 043260 326 GGI 328 (332)
Q Consensus 326 ~~~ 328 (332)
++.
T Consensus 299 ~~~ 301 (375)
T PLN02178 299 GGM 301 (375)
T ss_pred cCH
Confidence 653
No 22
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=1.9e-43 Score=333.76 Aligned_cols=283 Identities=27% Similarity=0.372 Sum_probs=228.5
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC---CCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL---PLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~---~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
|||++++.++.+++++++|.|+|+++||||||+++|||++|++ +.|.++. ..+|.++|||++|+|+++|++ +.|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 6899998654449999999999999999999999999999999 8776432 246889999999999999999 9999
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||||++.+..+|+.|.+|++|++++|++..+...|... ..|+|+||+.++++.++++|++++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~-----------------~~G~~aey~~~~~~~~~~~P~~~~ 142 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKG-----------------LHGFMREYFVDDPEYLVKVPPSLA 142 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCC-----------------CCccceeEEEeccccEEECCCCCC
Confidence 999999999999999999999999999886543223210 124699999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHH------hhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcC---CcchHHHHHHcC
Q 043260 171 LSLAGFLSCGYSSGFGAAWK------EFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDK---NPCRKDKGEAFG 241 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~------~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~---~~~~~~~~~~lg 241 (332)
++ +.+..++.++++++.. ....++|++|+|+|+|++|++++|+|+.+|+ +|+++++ +++|+++++++|
T Consensus 143 -~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~G 219 (355)
T cd08230 143 -DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELG 219 (355)
T ss_pred -cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcC
Confidence 44 4444576666655422 2235789999999999999999999999999 8999987 678999999999
Q ss_pred CCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCC----hHhHhc
Q 043260 242 MTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLN----FPAIAL 316 (332)
Q Consensus 242 a~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~----~~~~~~ 316 (332)
++. +++.+ +++.+ . +. ..++|+|||++|++..+..+++.++++ |+++.+|...+ ...+++ ...++.
T Consensus 220 a~~-v~~~~---~~~~~-~-~~--~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~ 290 (355)
T cd08230 220 ATY-VNSSK---TPVAE-V-KL--VGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVL 290 (355)
T ss_pred CEE-ecCCc---cchhh-h-hh--cCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhh
Confidence 987 45554 33333 2 12 237999999999877889999999998 99999998765 355666 234444
Q ss_pred -CcEEEEeeccc
Q 043260 317 -GRNLKGTIFGG 327 (332)
Q Consensus 317 -~~~i~g~~~~~ 327 (332)
+++|.|+..++
T Consensus 291 k~~~i~g~~~~~ 302 (355)
T cd08230 291 GNKALVGSVNAN 302 (355)
T ss_pred cCcEEEEecCCc
Confidence 99999987654
No 23
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=3.3e-43 Score=331.02 Aligned_cols=282 Identities=24% Similarity=0.376 Sum_probs=239.5
Q ss_pred eeeEEEecCCCCeEEEEEecCCC-CCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPP-KATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
|||+++++++. ++++++|.|+| +++||+|||.++++|++|+. +.... ...+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 78999998875 99999999997 58999999999999999997 43211 12468899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChh
Q 043260 93 DIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLS 172 (332)
Q Consensus 93 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~ 172 (332)
|||++.+..+|+.|.+|+.|++++|.+..+. |...+| +|+||+.++.+.++++|++++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~--g~~~~G------------------~~aey~~v~~~~~~~lP~~~s~~ 138 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDFI--GSRRDG------------------GNAEYIVVKRKNLFALPTDMPIE 138 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCccee--ccCCCC------------------ccceeEEeehHHeEECcCCCCHH
Confidence 9999999999999999999999999875433 443344 59999999999999999999999
Q ss_pred hhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCC
Q 043260 173 LAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEP 252 (332)
Q Consensus 173 ~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 252 (332)
+++.+. ++.++++++ +...+++|++|||+|+|++|++++|+|+.+|++.|+++++++++++.++++|++++++++.
T Consensus 139 ~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~-- 214 (347)
T PRK10309 139 DGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE-- 214 (347)
T ss_pred Hhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc--
Confidence 999874 566788875 6678899999999999999999999999999955889999999999999999999998775
Q ss_pred CchHHHHHHHhcCCCCcc-EEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCC---hHhHhc-CcEEEEeecc
Q 043260 253 NKSISELVKEMTHGTGVD-YGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLN---FPAIAL-GRNLKGTIFG 326 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~g~d-~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~---~~~~~~-~~~i~g~~~~ 326 (332)
.+ .+.+.+++.+.++| +||||+|+...+.+++++++++ |+++.+|.... ..+++ +..+++ +++|.|++.+
T Consensus 215 -~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~i~g~~~~ 289 (347)
T PRK10309 215 -MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHH-DLHLTSATFGKILRKELTVIGSWMN 289 (347)
T ss_pred -cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC-CcccChhhhhHHhhcCcEEEEEecc
Confidence 44 45567777766898 9999999977899999999998 99999998763 23333 234454 8999998875
No 24
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=1.1e-42 Score=330.84 Aligned_cols=315 Identities=40% Similarity=0.699 Sum_probs=257.2
Q ss_pred ccceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 043260 11 KIYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKEL 89 (332)
Q Consensus 11 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~ 89 (332)
+..+||++++..++.+++++++|.|++.++||+|||+++++|++|+. +.|.++ ..+|.++|||++|+|+++|++++.+
T Consensus 4 ~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~ 82 (373)
T cd08299 4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTV 82 (373)
T ss_pred ccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccC
Confidence 34569999998887779999999999999999999999999999999 777653 4578899999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCcccCCCCcccc-ccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCC
Q 043260 90 KEGDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPS 168 (332)
Q Consensus 90 ~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~ 168 (332)
++||+|+..+..+|+.|.+|+++.++.|++..... .|+..++..+....|.+..+....|+|+||+.++.+.++++|++
T Consensus 83 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~ 162 (373)
T cd08299 83 KPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAA 162 (373)
T ss_pred CCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCC
Confidence 99999999999999999999999999998764321 12222111111111111122223478999999999999999999
Q ss_pred CChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCC
Q 043260 169 IDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINP 248 (332)
Q Consensus 169 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 248 (332)
+++++++++++++.+||+++.+..++++|++|+|+|+|++|++++++++.+|+.+|++++++++|++.++++|++++++.
T Consensus 163 l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~ 242 (373)
T cd08299 163 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP 242 (373)
T ss_pred CChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence 99999999999999999988788899999999999889999999999999998679999999999999999999999987
Q ss_pred CCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhc-cCCcEEEEEcCCCC-CcccCChHhHhcCcEEEEeecc
Q 043260 249 DDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATK-LGKGKVMAIGAANE-AKVPLNFPAIALGRNLKGTIFG 326 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~-~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~ 326 (332)
.+ ...++.+.+.++++ .++|++||++|++..+..++..+. ++ |+++.+|.... ...++++..+..+.++.|++.+
T Consensus 243 ~~-~~~~~~~~v~~~~~-~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~ 319 (373)
T cd08299 243 QD-YKKPIQEVLTEMTD-GGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFG 319 (373)
T ss_pred cc-cchhHHHHHHHHhC-CCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEec
Confidence 64 11236677777776 489999999998677888777664 56 99999998754 3456666545558899998877
Q ss_pred ccc
Q 043260 327 GIK 329 (332)
Q Consensus 327 ~~~ 329 (332)
.+.
T Consensus 320 ~~~ 322 (373)
T cd08299 320 GWK 322 (373)
T ss_pred CCc
Confidence 654
No 25
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=3.6e-43 Score=328.63 Aligned_cols=274 Identities=23% Similarity=0.328 Sum_probs=235.5
Q ss_pred EEEecCC----CCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 18 VVCWGEG----EPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 18 ~~~~~~~----~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
+.+..++ ..++++++|.|+|+++||+|||+++|+|++|+. +.|.++...+|.++|||++|+|+++|++++++++|
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG 81 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence 4555554 248999999999999999999999999999999 87766544457899999999999999999999999
Q ss_pred CEEEeecc-cCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCCh
Q 043260 93 DIVIPTFI-GECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDL 171 (332)
Q Consensus 93 drV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~ 171 (332)
|||++.+. .+|+.|.+|++|++++|++..+. |+..+| +|+||+.++.+.++++|+++++
T Consensus 82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~--g~~~~G------------------~~aey~~v~~~~~~~lP~~~~~ 141 (329)
T TIGR02822 82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRYT--GWDTDG------------------GYAEYTTVPAAFAYRLPTGYDD 141 (329)
T ss_pred CEEEEcCccCcCCCChHHhCcCcccCCCcccC--CcccCC------------------cceeEEEeccccEEECCCCCCH
Confidence 99987664 57999999999999999987654 554444 5999999999999999999999
Q ss_pred hhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCC
Q 043260 172 SLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDE 251 (332)
Q Consensus 172 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 251 (332)
++++.+++++.|||+++ ...++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++++++..+
T Consensus 142 ~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~- 218 (329)
T TIGR02822 142 VELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYD- 218 (329)
T ss_pred HHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccc-
Confidence 99999999999999988 46889999999999999999999999999999 7999999999999999999999987543
Q ss_pred CCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeeccc
Q 043260 252 PNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 327 (332)
.. ..++|+++++.+..+.+..++++++++ |+++.+|.......++++..++. +++|.|++...
T Consensus 219 --~~----------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 282 (329)
T TIGR02822 219 --TP----------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNT 282 (329)
T ss_pred --cC----------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCC
Confidence 10 126899999998888999999999998 99999998643334577666555 88999987543
No 26
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=2.6e-42 Score=326.55 Aligned_cols=299 Identities=26% Similarity=0.397 Sum_probs=253.0
Q ss_pred eeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCC------
Q 043260 16 AAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKE------ 88 (332)
Q Consensus 16 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~------ 88 (332)
||++++++++.+++++++.|+|+++||+|||.++++|++|+. +.|.++...+|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 789999988779999999999999999999999999999999 7776653567889999999999999999986
Q ss_pred CCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCC-ceEEcCC
Q 043260 89 LKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN-YVVKVDP 167 (332)
Q Consensus 89 ~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~-~v~~lP~ 167 (332)
|++||+|+..+..+|+.|.+|+.+.++.|++..+. |...+-+ .....|+|+||+.++++ .++++|+
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~--~~~~~~~-----------~~~~~g~~a~~~~v~~~~~~~~lP~ 148 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY--GHEASCD-----------DPHLSGGYAEHIYLPPGTAIVRVPD 148 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchhc--ccccccc-----------CCCCCcccceEEEecCCCceEECCC
Confidence 99999999999999999999999999999987654 3322100 00113579999999986 7999999
Q ss_pred CCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeC
Q 043260 168 SIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFIN 247 (332)
Q Consensus 168 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~ 247 (332)
++++++++++++++.|||+++.+....++|++|||+|+|++|++++++|+.+|+++|+++++++++.++++++|++.+++
T Consensus 149 ~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~ 228 (361)
T cd08231 149 NVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATID 228 (361)
T ss_pred CCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEc
Confidence 99999999998999999999876666679999999999999999999999999878999999999999999999999988
Q ss_pred CCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhc-CcEEEEeec
Q 043260 248 PDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIAL-GRNLKGTIF 325 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~-~~~i~g~~~ 325 (332)
.+.....++.+.+.++++++++|++||++|+...+..++++++++ |+++.+|.... ...+++...++. ++++.+++.
T Consensus 229 ~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (361)
T cd08231 229 IDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHN 307 (361)
T ss_pred CcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEccc
Confidence 765112223356788888889999999999867889999999998 99999997653 345666655555 999999876
Q ss_pred ccc
Q 043260 326 GGI 328 (332)
Q Consensus 326 ~~~ 328 (332)
++.
T Consensus 308 ~~~ 310 (361)
T cd08231 308 YDP 310 (361)
T ss_pred CCc
Confidence 543
No 27
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.7e-42 Score=326.25 Aligned_cols=292 Identities=25% Similarity=0.413 Sum_probs=243.0
Q ss_pred ceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 043260 13 YYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKE 91 (332)
Q Consensus 13 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 91 (332)
..++|+++++++.++++++++.|+|+++||+|||.++++|++|+. +.+.++...+|.++|||++|+|+++|+++++|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~ 87 (357)
T PLN02514 8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV 87 (357)
T ss_pred ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccC
Confidence 459999999999999999999999999999999999999999999 7776544567899999999999999999999999
Q ss_pred CCEEEeecc-cCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 92 GDIVIPTFI-GECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 92 GdrV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
||+|++.+. .+|+.|.+|++|.+++|++..+...+....|. ...|+|+||+.++.+.++++|++++
T Consensus 88 Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~-------------~~~G~~aey~~v~~~~~~~iP~~~~ 154 (357)
T PLN02514 88 GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGK-------------PTQGGFASAMVVDQKFVVKIPEGMA 154 (357)
T ss_pred CCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCc-------------cCCCccccEEEEchHHeEECCCCCC
Confidence 999986554 47999999999999999886322100001110 1135699999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHH-HHHcCCCeeeCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDK-GEAFGMTDFINPD 249 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~-~~~lga~~v~~~~ 249 (332)
+++++.+++++.|||+++.+....++|++|+|+|+|++|++++|+|+.+|+ +|++++.++++++. ++++|++.+++..
T Consensus 155 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~ 233 (357)
T PLN02514 155 PEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSS 233 (357)
T ss_pred HHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCC
Confidence 999999999999999988665566899999999999999999999999999 78888877776654 4679999888764
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeecccc
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFGGI 328 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~~~ 328 (332)
+ . +.+.+.+. ++|++||++|....+..++++++++ |+++.+|... ...+++...++. ++++.|++.++.
T Consensus 234 ~---~---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~i~g~~~~~~ 303 (357)
T PLN02514 234 D---A---AEMQEAAD--SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVIN-TPLQFVTPMLMLGRKVITGSFIGSM 303 (357)
T ss_pred C---h---HHHHHhcC--CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCC-CCCcccHHHHhhCCcEEEEEecCCH
Confidence 4 2 23445443 6999999999877889999999998 9999999875 345677777666 999999987653
No 28
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=6.9e-42 Score=322.47 Aligned_cols=286 Identities=28% Similarity=0.462 Sum_probs=249.9
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCC---C--------CCCCCcccccceeEEEEEe
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGF---P--------LPLFPRVLGHEGVGMVESI 82 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~---~--------~~~~p~v~G~e~~G~Vv~v 82 (332)
|||+++++++. +++++++.|+|+++||+||+.++++|++|+. +.+.. + ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 78999998775 9999999999999999999999999999987 55321 1 1236889999999999999
Q ss_pred CCCCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCce
Q 043260 83 GDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYV 162 (332)
Q Consensus 83 G~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v 162 (332)
|++++.+++||+|+..+..+|+.|.+|++|.++.|.+..+. |+.. ..|+|+||+.++...+
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----------------~~g~~a~~~~~~~~~~ 140 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFI--GLGG-----------------GGGGFAEYVVVPAYHV 140 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCcee--ccCC-----------------CCCceeeEEEechHHe
Confidence 99999999999999999999999999999999999865432 2211 0246999999999999
Q ss_pred EEcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCC
Q 043260 163 VKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGM 242 (332)
Q Consensus 163 ~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga 242 (332)
+++|+++++++++.+ .++.|||+++ +..++++|++|+|+|+|.+|++++|+++.+|+++|+++++++++.++++++|+
T Consensus 141 ~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga 218 (351)
T cd08233 141 HKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGA 218 (351)
T ss_pred EECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC
Confidence 999999999999876 5888999988 77889999999999999999999999999998789999999999999999999
Q ss_pred CeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEE
Q 043260 243 TDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLK 321 (332)
Q Consensus 243 ~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~ 321 (332)
+.++++++ .++.+.++++++++++|+|||++|....+..++++++++ |+++.+|... ...++++..++. +++|.
T Consensus 219 ~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~ 293 (351)
T cd08233 219 TIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE-KPISFNPNDLVLKEKTLT 293 (351)
T ss_pred CEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC-CCCccCHHHHHhhCcEEE
Confidence 99999887 778888888888778999999999877889999999998 9999999876 556778777666 89999
Q ss_pred Eeeccc
Q 043260 322 GTIFGG 327 (332)
Q Consensus 322 g~~~~~ 327 (332)
|++.+.
T Consensus 294 g~~~~~ 299 (351)
T cd08233 294 GSICYT 299 (351)
T ss_pred EEeccC
Confidence 987653
No 29
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=2e-41 Score=321.25 Aligned_cols=308 Identities=43% Similarity=0.757 Sum_probs=265.0
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGD 93 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 93 (332)
+||+++.+.+.++++++++.|+++++||+||+.++++|++|+. +.+..+ ..+|.++|||++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 4788999887779999999999999999999999999999999 777654 45678999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCcccCCCCccc-cccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChh
Q 043260 94 IVIPTFIGECRECENCTSEMANLCLKYPFT-FHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLS 172 (332)
Q Consensus 94 rV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~ 172 (332)
+|+..+..+|+.|++|+.|.+++|....+. ..|...+|+.++.-.|....|....|+|++|+.++++.++++|++++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~ 159 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLE 159 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHH
Confidence 999999999999999999999999887644 2455555655554455555555556789999999999999999999999
Q ss_pred hhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCC
Q 043260 173 LAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEP 252 (332)
Q Consensus 173 ~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 252 (332)
+++.+++++.+||+++.+.+++++|++|||+|+|++|++++++++.+|+..|+++++++++++.++++|++++++..+
T Consensus 160 ~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~-- 237 (365)
T cd05279 160 KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD-- 237 (365)
T ss_pred HhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc--
Confidence 999999999999998878889999999999988999999999999999856888888999999999999999998765
Q ss_pred Cc--hHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhc-cCCcEEEEEcCCCC-CcccCChHhHhcCcEEEEeecccc
Q 043260 253 NK--SISELVKEMTHGTGVDYGFECTGVASLISEALEATK-LGKGKVMAIGAANE-AKVPLNFPAIALGRNLKGTIFGGI 328 (332)
Q Consensus 253 ~~--~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~-~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~ 328 (332)
. ++.+.+.++++ .++|+|||++|....+..++++++ ++ |+++.+|.... ....++...+..+.++.|++.+++
T Consensus 238 -~~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 314 (365)
T cd05279 238 -QDKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGW 314 (365)
T ss_pred -ccchHHHHHHHHhC-CCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCC
Confidence 4 67777888775 589999999997678899999999 88 99999997642 456777777744888999876654
No 30
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=2.6e-41 Score=320.45 Aligned_cols=307 Identities=37% Similarity=0.674 Sum_probs=257.2
Q ss_pred ceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 043260 13 YYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKE 91 (332)
Q Consensus 13 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 91 (332)
|+|||++++++++++++++.+.|++.++||+|||.++++|++|+. ..+.++ ..+|.++|||++|+|+++|+++..+++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 689999999877679999999999999999999999999999999 777654 356889999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCcccCCCCcccc-ccccCCCCCccccc-ccce-ecccccCCceeeEEecCCceEEcCCC
Q 043260 92 GDIVIPTFIGECRECENCTSEMANLCLKYPFTF-HGLMPDGSSRMSIR-GQKL-YHIFTCSTMTEYMVVDANYVVKVDPS 168 (332)
Q Consensus 92 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~g~~~~~~~-~~~~-~~~~~~G~~a~~~~v~~~~v~~lP~~ 168 (332)
||+|++.+. +|+.|.+|+.+..++|.+..... .|..++|......+ +.+. -+.+..|+|++|+.++.+.++++|++
T Consensus 80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 999998775 89999999999999998764321 23333332111000 0000 01223478999999999999999999
Q ss_pred CChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCC
Q 043260 169 IDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINP 248 (332)
Q Consensus 169 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 248 (332)
+++++++.+++++.||+.++.+...+++|++|||+|+|++|++++++|+.+|+..|++++++++|.+.++++|++.++++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~ 238 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 99999999999999999988788889999999999889999999999999999679999999999999999999999988
Q ss_pred CCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhc-CcEEEEeecc
Q 043260 249 DDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIAL-GRNLKGTIFG 326 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~-~~~i~g~~~~ 326 (332)
+. .++.+.+.+.+ +.++|+|+|++|++..+..++++++++ |+++.+|.... ....++...++. ++++.++...
T Consensus 239 ~~---~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (365)
T cd08278 239 KE---EDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEG 313 (365)
T ss_pred CC---cCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecC
Confidence 76 67778888877 668999999999877889999999998 99999997643 446777777634 8999887654
No 31
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=8.1e-42 Score=321.02 Aligned_cols=271 Identities=22% Similarity=0.231 Sum_probs=221.3
Q ss_pred ceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC----CCCCcccccceeEEEEEeCCCCC
Q 043260 13 YYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL----PLFPRVLGHEGVGMVESIGDEVK 87 (332)
Q Consensus 13 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~----~~~p~v~G~e~~G~Vv~vG~~v~ 87 (332)
|..|+++++++++ +++++++.|+ +++||||||+++|||++|++ +.|.++. ..+|.++|||++|+|+++|.+
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~-- 76 (341)
T cd08237 1 MINQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG-- 76 (341)
T ss_pred CcccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--
Confidence 4568999999986 9999999995 99999999999999999999 8776532 357999999999999998764
Q ss_pred CCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCC
Q 043260 88 ELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDP 167 (332)
Q Consensus 88 ~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~ 167 (332)
+|++||||++.+..+|+ |.+| +..+.|.+..+. |...+| +|+||+.+|+++++++|+
T Consensus 77 ~~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~--g~~~~G------------------~~aey~~v~~~~~~~vP~ 133 (341)
T cd08237 77 TYKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRFR--SSGYDG------------------FMQDYVFLPPDRLVKLPD 133 (341)
T ss_pred ccCCCCEEEECCCCCch-hccc--chhccCCCccee--EecCCC------------------ceEEEEEEchHHeEECCC
Confidence 79999999998888887 5456 466788776543 443444 599999999999999999
Q ss_pred CCChhhhhhcccchhhhHHHHHHh--hCCCCCCEEEEECCChHHHHHHHHHHH-cCCCeEEEEcCCcchHHHHHHcCCCe
Q 043260 168 SIDLSLAGFLSCGYSSGFGAAWKE--FKVEKGSSVAVFGLGAVGLGVMDRARI-QGAAKIIGIDKNPCRKDKGEAFGMTD 244 (332)
Q Consensus 168 ~~~~~~aa~l~~~~~ta~~al~~~--~~~~~g~~vlV~G~g~vG~~~~~la~~-~G~~~Vi~~~~~~~~~~~~~~lga~~ 244 (332)
++++++||++. +++++|+++... ..+++|++|||+|+|++|++++|+++. +|..+|++++++++|++++++++++.
T Consensus 134 ~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~ 212 (341)
T cd08237 134 NVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETY 212 (341)
T ss_pred CCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCcee
Confidence 99999888654 888999988543 356889999999999999999999986 66558999999999999998876653
Q ss_pred eeCCCCCCCchHHHHHHHhcCCCCccEEEEcCC---ChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEE
Q 043260 245 FINPDDEPNKSISELVKEMTHGTGVDYGFECTG---VASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNL 320 (332)
Q Consensus 245 v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i 320 (332)
.++ ++ ....++|+|||++| .+..+.+++++++++ |+++.+|... ...++++..++. +++|
T Consensus 213 ~~~-------~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~k~~~i 276 (341)
T cd08237 213 LID-------DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSE-YPVPINTRMVLEKGLTL 276 (341)
T ss_pred ehh-------hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecC-CCcccCHHHHhhCceEE
Confidence 321 11 11236999999999 456789999999998 9999999765 446777776665 9999
Q ss_pred EEeeccc
Q 043260 321 KGTIFGG 327 (332)
Q Consensus 321 ~g~~~~~ 327 (332)
.|+..++
T Consensus 277 ~g~~~~~ 283 (341)
T cd08237 277 VGSSRST 283 (341)
T ss_pred EEecccC
Confidence 9987653
No 32
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=9e-41 Score=312.76 Aligned_cols=282 Identities=26% Similarity=0.421 Sum_probs=247.6
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGD 93 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 93 (332)
|||+++++++.++++++++.|++.++||+||+.++++|++|+. +.|..+...+|.++|||++|+|+++|++++++++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 7999999986569999999999999999999999999999999 877655456788999999999999999999999999
Q ss_pred EEEeec-ccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChh
Q 043260 94 IVIPTF-IGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLS 172 (332)
Q Consensus 94 rV~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~ 172 (332)
+|++.+ ...|++|.+|+.|.++.|....+. |+..+| +|++|+.++...++++|++++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~--~~~~~g------------------~~a~~~~v~~~~~~~lp~~~~~~ 140 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKVT--GVTRDG------------------GYAEYMLAPAEALARIPDDLDAA 140 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCcc--CcccCC------------------cceeEEEEchhheEeCCCCCCHH
Confidence 998754 578999999999999999987644 443334 59999999999999999999999
Q ss_pred hhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCC
Q 043260 173 LAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEP 252 (332)
Q Consensus 173 ~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 252 (332)
+++.+++++.+||+++. ...++++++|||+|+|++|++++++|+.+|+ +|+++++++++++.++++|+++++++..
T Consensus 141 ~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~-- 216 (333)
T cd08296 141 EAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK-- 216 (333)
T ss_pred HhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC--
Confidence 99999999999999884 4589999999999999999999999999999 8999999999999999999999998876
Q ss_pred CchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeecc
Q 043260 253 NKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFG 326 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~ 326 (332)
.++.+.+.++ .++|++||++|....+..++++++++ |+++.+|... ...+++...++. +++|.|+..+
T Consensus 217 -~~~~~~~~~~---~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~ 285 (333)
T cd08296 217 -EDVAEALQEL---GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPSG 285 (333)
T ss_pred -ccHHHHHHhc---CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC-CCCCcCHHHHhhcccEEEEeCcC
Confidence 6677667665 26999999998667889999999998 9999999876 456677666556 9999998754
No 33
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=2.6e-40 Score=313.25 Aligned_cols=308 Identities=35% Similarity=0.638 Sum_probs=259.0
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGD 93 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 93 (332)
|||++++.++.++++++++.|+++++||+||+.++++|++|+. +.+.++ ..+|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 7999999987779999999999999999999999999999999 777654 45678999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhh
Q 043260 94 IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSL 173 (332)
Q Consensus 94 rV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~ 173 (332)
+|+..+..+|++|++|+++++++|++....-+|..+++...+...|...+.....|+|++|+.++.+.++++|+++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~ 159 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR 159 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence 99999999999999999999999998753222322222211111111111122347899999999999999999999999
Q ss_pred hhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCC
Q 043260 174 AGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPN 253 (332)
Q Consensus 174 aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 253 (332)
++.+++++.+||.++....+++++++|||+|+|++|++++++++..|+.+|+++++++++.+.++++|++++++.+.
T Consensus 160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~--- 236 (363)
T cd08279 160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE--- 236 (363)
T ss_pred eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC---
Confidence 99999999999998878888999999999988999999999999999955999999999999999999999998876
Q ss_pred chHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhc-CcEEEEeeccc
Q 043260 254 KSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 254 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~-~~~i~g~~~~~ 327 (332)
.++...+.+++.++++|++||++++...+..++++++++ |+++.+|.... ....++...+.. +.++.++.++.
T Consensus 237 ~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (363)
T cd08279 237 DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGS 311 (363)
T ss_pred ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecC
Confidence 677788888877778999999999767889999999998 99999997653 456677777665 77888876543
No 34
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=7.3e-40 Score=306.92 Aligned_cols=281 Identities=21% Similarity=0.319 Sum_probs=237.9
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGD 93 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 93 (332)
|||+++++++. +++++++.|+|+++|++||+.++++|++|+. +.+..+...+|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 68999998875 9999999999999999999999999999999 777665456789999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhh
Q 043260 94 IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSL 173 (332)
Q Consensus 94 rV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~ 173 (332)
+|++.+..+|+.|.+|.+|.+++|.+..+. ++..+ |+|+||+.++.+.++++|+++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~~~~~~~~~ip~~~~~~~ 139 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVVL--GVHRD------------------GGFSEYAVVPAKNAHRIPDAIADQY 139 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCceE--EEccC------------------CcceeeEEechHHeEECcCCCCHHH
Confidence 999999999999999999999999765432 33333 3599999999999999999999988
Q ss_pred hhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHH-cCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCC
Q 043260 174 AGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARI-QGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEP 252 (332)
Q Consensus 174 aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~-~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 252 (332)
++ +..++.++++ +.+..++++|++|+|+|+|++|++++|+++. +|+..|++++++++|+++++++|+++++++++
T Consensus 140 a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~-- 215 (339)
T PRK10083 140 AV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ-- 215 (339)
T ss_pred Hh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--
Confidence 77 4467888886 4477899999999999999999999999996 69866888999999999999999999998876
Q ss_pred CchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeec
Q 043260 253 NKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIF 325 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~ 325 (332)
.++.+.+... +.++|++||++|++..+..++++++++ |+++.+|.... ...++...+.. ++++.++..
T Consensus 216 -~~~~~~~~~~--g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 284 (339)
T PRK10083 216 -EPLGEALEEK--GIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE-PSEIVQQGITGKELSIFSSRL 284 (339)
T ss_pred -ccHHHHHhcC--CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC-CceecHHHHhhcceEEEEEec
Confidence 5566655432 335689999999767899999999998 99999998653 34445544444 777777654
No 35
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=5.9e-41 Score=288.19 Aligned_cols=253 Identities=24% Similarity=0.297 Sum_probs=231.1
Q ss_pred ccccceeeeEEEecCCCC--eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCC
Q 043260 9 FLKIYYAAAVVCWGEGEP--WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDE 85 (332)
Q Consensus 9 ~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~ 85 (332)
...|+..|-+++++.+.. +++++.|.|+|.++|++||..|+|+|+.|.. ..|-+...++|+++|.|++|+|+++|++
T Consensus 3 ~~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~g 82 (336)
T KOG1197|consen 3 AASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEG 82 (336)
T ss_pred CCCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCC
Confidence 356788899999877654 9999999999999999999999999999999 8888877899999999999999999999
Q ss_pred CCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEc
Q 043260 86 VKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKV 165 (332)
Q Consensus 86 v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~l 165 (332)
|+++++||||+... ..|.|+|+..+|...++++
T Consensus 83 vtdrkvGDrVayl~-----------------------------------------------~~g~yaee~~vP~~kv~~v 115 (336)
T KOG1197|consen 83 VTDRKVGDRVAYLN-----------------------------------------------PFGAYAEEVTVPSVKVFKV 115 (336)
T ss_pred ccccccccEEEEec-----------------------------------------------cchhhheeccccceeeccC
Confidence 99999999997321 1356999999999999999
Q ss_pred CCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCe
Q 043260 166 DPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTD 244 (332)
Q Consensus 166 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~ 244 (332)
|+.+++.+||++.....|||.-+++...+++|++|||+.+ |++|+++.|+++..|. ++|.+.++++|.+.+++.|+.+
T Consensus 116 pe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h 194 (336)
T KOG1197|consen 116 PEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEH 194 (336)
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcc
Confidence 9999999999999999999998888899999999999976 9999999999999999 9999999999999999999999
Q ss_pred eeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhH
Q 043260 245 FINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAI 314 (332)
Q Consensus 245 v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~ 314 (332)
.|+++. +++.+.+.+.++++|+|+++|++|. +++...+.+|++. |.+|.+|+.++..-+++...+
T Consensus 195 ~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~asgl~~p~~l~~l 259 (336)
T KOG1197|consen 195 PIDYST---EDYVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-GKMVSFGNASGLIDPIPLNQL 259 (336)
T ss_pred eeeccc---hhHHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-ceEEEeccccCCCCCeehhhc
Confidence 999998 9999999999999999999999999 6999999999998 999999998884444444443
No 36
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1e-39 Score=307.52 Aligned_cols=287 Identities=27% Similarity=0.416 Sum_probs=243.8
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCC---------CCCCCcccccceeEEEEEeCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFP---------LPLFPRVLGHEGVGMVESIGD 84 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~---------~~~~p~v~G~e~~G~Vv~vG~ 84 (332)
|||++++++++ +++++.+.|++.+++|+||+.++++|+.|+. ..|... ...+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 68999998876 9999999999999999999999999999998 666421 114678899999999999999
Q ss_pred CCC--CCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCC-c
Q 043260 85 EVK--ELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN-Y 161 (332)
Q Consensus 85 ~v~--~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~-~ 161 (332)
+++ .|++||+|+..+..+|+.|.+|++|++++|+.... .|+... ..|+|++|+.++++ .
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~----------------~~g~~~~~~~~~~~~~ 141 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL--YGFQNN----------------VNGGMAEYMRFPKEAI 141 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc--eeeccC----------------CCCcceeeEEcccccc
Confidence 999 89999999999999999999999999999986432 244211 12469999999987 6
Q ss_pred eEEcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcC
Q 043260 162 VVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFG 241 (332)
Q Consensus 162 v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lg 241 (332)
++++|+++++++++.+ .++.++|+++ +..++++|++|+|.|+|.+|++++++|+.+|+..|+++++++++.++++++|
T Consensus 142 ~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g 219 (350)
T cd08256 142 VHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFG 219 (350)
T ss_pred eEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcC
Confidence 7899999999999988 7999999987 7789999999999777999999999999999867888999999999999999
Q ss_pred CCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhH--hcCcE
Q 043260 242 MTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAI--ALGRN 319 (332)
Q Consensus 242 a~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~--~~~~~ 319 (332)
++.+++... .++.+.+.+++++.++|++||++|+...+..++++++++ |+++.+|.... ...++...+ ..+++
T Consensus 220 ~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~ 294 (350)
T cd08256 220 ADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGD-PVTVDWSIIGDRKELD 294 (350)
T ss_pred CcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCC-CCccChhHhhcccccE
Confidence 999998876 778888888888888999999999766888999999998 99999997653 333444443 23777
Q ss_pred EEEeeccc
Q 043260 320 LKGTIFGG 327 (332)
Q Consensus 320 i~g~~~~~ 327 (332)
+.|+....
T Consensus 295 i~~~~~~~ 302 (350)
T cd08256 295 VLGSHLGP 302 (350)
T ss_pred EEEeccCc
Confidence 88776543
No 37
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1e-39 Score=307.71 Aligned_cols=288 Identities=26% Similarity=0.362 Sum_probs=245.0
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGD 93 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 93 (332)
|||+++++++. +++++.+.|.+.++||+|||.++++|++|+. +.+.++...+|.++|||++|+|+++|++++++++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 79999999886 8999999999999999999999999999998 777655456789999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCC--ceEEcCCCCCh
Q 043260 94 IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN--YVVKVDPSIDL 171 (332)
Q Consensus 94 rV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~--~v~~lP~~~~~ 171 (332)
+|+..+..+|+.|..|+.|..+.|.+.. .|.... ....|+|+||+.++.+ .++++|+++++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~---~~~~~~--------------~~~~g~~~~y~~v~~~~~~~~~lP~~~~~ 142 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGML---GGWKFS--------------NFKDGVFAEYFHVNDADANLAPLPDGLTD 142 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCC---CCcccc--------------CCCCcceeEEEEcchhhCceEECCCCCCH
Confidence 9999888899999999999999998753 121110 0112569999999874 89999999999
Q ss_pred hhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCC
Q 043260 172 SLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDE 251 (332)
Q Consensus 172 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 251 (332)
++++.++.++.||++++ +...+++|++|||+|+|++|++++|+++.+|+..|+++++++++.++++++|+++++++..
T Consensus 143 ~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~- 220 (351)
T cd08285 143 EQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN- 220 (351)
T ss_pred HHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC-
Confidence 99999988999999986 6788999999999988999999999999999966999999999999999999999999876
Q ss_pred CCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhH--hc-CcEEEEeec
Q 043260 252 PNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAI--AL-GRNLKGTIF 325 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~--~~-~~~i~g~~~ 325 (332)
.++.+.+.+++.+.++|++||++|+.+.+..++++++++ |+++.+|.... ...+++...+ .. ..++.+++.
T Consensus 221 --~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 295 (351)
T cd08285 221 --GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLC 295 (351)
T ss_pred --CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeec
Confidence 677788888877778999999999877889999999998 99999998764 3344443222 22 556666543
No 38
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=2.3e-39 Score=303.55 Aligned_cols=285 Identities=27% Similarity=0.425 Sum_probs=249.7
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFP---LPLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~---~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
|||+++++++.++++.+.+.|++.++||+||+.++++|++|+. ..+.++ ...+|.++|||++|+|+++|+++..++
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 6899999887779999999999999999999999999999998 776553 245688999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||+|+..+...|+.|.+|+.|.+++|++..+. |+..+| +|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------------~~~~~~~v~~~~~~~~P~~ls 140 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFP--GIGTDG------------------GFAEYLLVPSRRLVKLPRGLD 140 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCccc--CccCCC------------------cceeeEEecHHHeEECCCCCC
Confidence 999999999899999999999999999998876 664444 499999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHh-hCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKE-FKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~-~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 249 (332)
+++++.++..+.|||+++.+. ..+.++++|||+|+|.+|++++++++..|..+|+++++++++.+.++++|++++++++
T Consensus 141 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 220 (340)
T cd05284 141 PVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNAS 220 (340)
T ss_pred HHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCC
Confidence 999999999999999998665 4688999999999988999999999999933899999999999999999999999887
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHh-HhcCcEEEEeecc
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPA-IALGRNLKGTIFG 326 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~~~~~~i~g~~~~ 326 (332)
. . +.+.+.+++++.++|+++|++|+...+..++++++++ |+++.+|.... .+++... +.+++++.++...
T Consensus 221 ~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~ 291 (340)
T cd05284 221 D---D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWG 291 (340)
T ss_pred c---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC--CccCHHHhhhcceEEEEEecc
Confidence 6 5 7778888887778999999999867889999999998 99999997652 4555554 3348888887643
No 39
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=3.9e-39 Score=307.75 Aligned_cols=299 Identities=29% Similarity=0.381 Sum_probs=247.2
Q ss_pred eeeEEEecCCCCeEEEEEecCCC-CCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPP-KATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
|||+++++++. +++++++.|+| ++++|+||+.++++|++|+. +.|.++..++|.++|||++|+|+++|++++++++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 78999998765 99999999998 49999999999999999999 88877666678999999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCcccCCCCcccc-----ccccCCCCCcccccccceecccccCCceeeEEecCC--ceEEc
Q 043260 93 DIVIPTFIGECRECENCTSEMANLCLKYPFTF-----HGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN--YVVKV 165 (332)
Q Consensus 93 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-----~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~--~v~~l 165 (332)
|+|+..+..+||+|++|..+.+++|++..... .|....+..... .++ ....|+|+||+.++.+ .++++
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~g~~~~~~~v~~~~~~~~~l 154 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYS----HLT-GGYAGGQAEYVRVPFADVGPFKI 154 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccc----ccc-CCCCCeeEEEEEcccccCeEEEC
Confidence 99999998899999999999999999876431 011110100000 000 0113679999999987 89999
Q ss_pred CCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCee
Q 043260 166 DPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDF 245 (332)
Q Consensus 166 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v 245 (332)
|+++++++++.++.++.|||+++ +..++++|++|||+|+|++|++++++|+..|..+|+++++++++++.+++++...+
T Consensus 155 p~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~v 233 (386)
T cd08283 155 PDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAET 233 (386)
T ss_pred CCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE
Confidence 99999999999999999999998 78899999999999889999999999999998569999999999999999855577
Q ss_pred eCCCCCCCc-hHHHHHHHhcCCCCccEEEEcCCC---------------------hHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 246 INPDDEPNK-SISELVKEMTHGTGVDYGFECTGV---------------------ASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 246 ~~~~~~~~~-~~~~~~~~~~~~~g~d~vid~~g~---------------------~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
+++.. . ++.+.+.++++++++|+|||++|+ ...+..++++++++ |+++.+|...
T Consensus 234 i~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~ 309 (386)
T cd08283 234 INFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYG 309 (386)
T ss_pred EcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCC
Confidence 77765 4 477888888887789999999975 24678999999998 9999999876
Q ss_pred CCcccCChHhHhc-CcEEEEee
Q 043260 304 EAKVPLNFPAIAL-GRNLKGTI 324 (332)
Q Consensus 304 ~~~~~~~~~~~~~-~~~i~g~~ 324 (332)
.....++...++. ++++.++.
T Consensus 310 ~~~~~~~~~~~~~~~~~i~~~~ 331 (386)
T cd08283 310 GTVNKFPIGAAMNKGLTLRMGQ 331 (386)
T ss_pred CCcCccCHHHHHhCCcEEEecc
Confidence 4345566644444 88888874
No 40
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=4.3e-39 Score=302.37 Aligned_cols=287 Identities=31% Similarity=0.435 Sum_probs=245.8
Q ss_pred eeeEEEecCCCCeEEEEEecCCC-CCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPP-KATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
|||+++.+++. +++.++|.|.| .++||+||+.++++|++|+. +.+.++..++|.++|||++|+|+++|++++.+++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 68999998876 89999999999 89999999999999999999 88777656778999999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCcccCCCCccccc-cccCCCCCcccccccceecccccCCceeeEEecCC--ceEEcCCCC
Q 043260 93 DIVIPTFIGECRECENCTSEMANLCLKYPFTFH-GLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN--YVVKVDPSI 169 (332)
Q Consensus 93 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~--~v~~lP~~~ 169 (332)
|+|+..+..+||.|.+|++|++++|++.....+ +... .|+|++|+.++.+ .++++|+++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~g~~~~~~~v~~~~~~~~~lP~~~ 141 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRI------------------DGGQAEYVRVPYADMNLAKIPDGL 141 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCC------------------CCeeeEEEEecchhCeEEECCCCC
Confidence 999999999999999999999999998764421 1112 2469999999987 999999999
Q ss_pred ChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCC
Q 043260 170 DLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 170 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 249 (332)
++++++.++.++.|||+++ ...++++|++|||.|+|++|++++|+|+.+|...|+++++++++.+.++++|++.+++++
T Consensus 142 ~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~ 220 (347)
T cd05278 142 PDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPK 220 (347)
T ss_pred CHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCC
Confidence 9999999999999999987 678899999999988899999999999999965788888888899999999999999887
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCc-ccCChHhHhcCcEEEEeec
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAK-VPLNFPAIALGRNLKGTIF 325 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~-~~~~~~~~~~~~~i~g~~~ 325 (332)
. .++.+.+.+++++.++|++||++++...+..++++++++ |+++.+|...... .......+..++++.++..
T Consensus 221 ~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
T cd05278 221 N---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLV 293 (347)
T ss_pred c---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeecc
Confidence 7 678888888887778999999999866889999999998 9999999665321 1122222233777777643
No 41
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=4.1e-39 Score=308.18 Aligned_cols=295 Identities=16% Similarity=0.173 Sum_probs=245.6
Q ss_pred ccceeeeEEEec--CC---CCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCC----------CCCCCcccccc
Q 043260 11 KIYYAAAVVCWG--EG---EPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFP----------LPLFPRVLGHE 74 (332)
Q Consensus 11 ~~~~~~a~~~~~--~~---~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~----------~~~~p~v~G~e 74 (332)
+|.+|||++++. .+ +.+++++++.|.++++||+||+.++++|++|+. +.+... ....+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 678899998863 22 238899999999999999999999999999998 655411 11123588999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceee
Q 043260 75 GVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEY 154 (332)
Q Consensus 75 ~~G~Vv~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~ 154 (332)
++|+|+++|++++.+++||+|+..+...|+.|.+|+.+.+++|+...+. |+... .|+|++|
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~--g~~~~-----------------~g~~a~y 149 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIW--GYETN-----------------YGSFAQF 149 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccc--cccCC-----------------CCcceeE
Confidence 9999999999999999999999999999999999999999999876444 54311 2459999
Q ss_pred EEecCCceEEcCCCCChhhhhhcccchhhhHHHHHHh--hCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCc
Q 043260 155 MVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKE--FKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNP 231 (332)
Q Consensus 155 ~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~--~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~ 231 (332)
+.++...++++|+++++++++.+++++.|||+++... +++++|++|+|+|+ |++|++++++++.+|+ +++++++++
T Consensus 150 ~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~ 228 (393)
T cd08246 150 ALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSE 228 (393)
T ss_pred EEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCH
Confidence 9999999999999999999999999999999988654 67899999999998 9999999999999999 788889999
Q ss_pred chHHHHHHcCCCeeeCCCCCC-------------------CchHHHHHHHhcCCC-CccEEEEcCCChHHHHHHHHHhcc
Q 043260 232 CRKDKGEAFGMTDFINPDDEP-------------------NKSISELVKEMTHGT-GVDYGFECTGVASLISEALEATKL 291 (332)
Q Consensus 232 ~~~~~~~~lga~~v~~~~~~~-------------------~~~~~~~~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~ 291 (332)
++++.++++|++.+++.+... ...+.+.+.+++++. ++|+|||++|+ ..+..+++++++
T Consensus 229 ~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l~~ 307 (393)
T cd08246 229 EKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVCDR 307 (393)
T ss_pred HHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHhcc
Confidence 999999999999999864310 013567788888887 89999999998 578999999999
Q ss_pred CCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeeccc
Q 043260 292 GKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 292 ~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 327 (332)
+ |+++.+|........++...++. +.++.|+..++
T Consensus 308 ~-G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~~~~ 343 (393)
T cd08246 308 G-GMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFAN 343 (393)
T ss_pred C-CEEEEEcccCCCCCCCcHHHHhhheeEEEecccCc
Confidence 8 99999997654334566666555 88888876544
No 42
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.4e-38 Score=299.12 Aligned_cols=286 Identities=28% Similarity=0.432 Sum_probs=248.9
Q ss_pred eeeEEEecCCCCeEEEEEecCCC-CCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPP-KATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
|||+++++++. +++++.+.|+| .++||+||++++++|++|+. +.|.++...+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 68999998886 99999999996 79999999999999999999 87776555568899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCC--ceEEcCCCCC
Q 043260 93 DIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN--YVVKVDPSID 170 (332)
Q Consensus 93 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~--~v~~lP~~~~ 170 (332)
|+|+..+...|+.|.+|..+.+++|...... .|...+ |+|++|+.++.+ .++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------------g~~~~~~~v~~~~~~~~~lp~~~~ 140 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI-LGNLID------------------GTQAEYVRIPHADNSLYKLPEGVD 140 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc-cccccC------------------CeeeeEEEcccccCceEECCCCCC
Confidence 9999999999999999999999999876432 232223 459999999987 9999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD 250 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 250 (332)
+.+++.++.++.+||+++....++++|+++||.|+|++|++++|+++.+|..+|++++++++|.+.++++|++.++++..
T Consensus 141 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~ 220 (345)
T cd08286 141 EEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK 220 (345)
T ss_pred HHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc
Confidence 99999999999999987767788999999999988999999999999999448999999999999999999999998876
Q ss_pred CCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeec
Q 043260 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIF 325 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~ 325 (332)
.++.+.+.+++++.++|++||+++....+..+++.++++ |+++.+|... ...++++..++. ++++.+...
T Consensus 221 ---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~ 291 (345)
T cd08286 221 ---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHG-KPVDLHLEKLWIKNITITTGLV 291 (345)
T ss_pred ---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccC-CCCCcCHHHHhhcCcEEEeecC
Confidence 667777888877778999999999877889999999998 9999999765 346677766444 888887544
No 43
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=1.3e-38 Score=306.31 Aligned_cols=279 Identities=19% Similarity=0.292 Sum_probs=224.9
Q ss_pred ceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-c-cCCCCC------CCCCcccccceeEEEEEeCC
Q 043260 13 YYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-S-SKGFPL------PLFPRVLGHEGVGMVESIGD 84 (332)
Q Consensus 13 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~-~g~~~~------~~~p~v~G~e~~G~Vv~vG~ 84 (332)
|+||++++++++. ++++++|.|+|+++||+|||.++|||++|++ + .+.... ..+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 6799999999886 9999999999999999999999999999998 5 343211 24788999999999999999
Q ss_pred CCC-CCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCC---
Q 043260 85 EVK-ELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN--- 160 (332)
Q Consensus 85 ~v~-~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~--- 160 (332)
+|+ .|++||||++.+...|+.|.+|. + .|+..+| +|+||+.++.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~------------~g~~~~G------------------~~aey~~v~~~~~~ 128 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCP-G------------YSYTYPG------------------GLATYHIIPNEVME 128 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCC-C------------ccccCCC------------------cceEEEEecHHhcc
Confidence 998 59999999999999999888772 1 1332333 59999999986
Q ss_pred -ceEEcCCCCChhhhhhcccchh---hhHHHH--------HHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcC--CCeEE
Q 043260 161 -YVVKVDPSIDLSLAGFLSCGYS---SGFGAA--------WKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQG--AAKII 225 (332)
Q Consensus 161 -~v~~lP~~~~~~~aa~l~~~~~---ta~~al--------~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G--~~~Vi 225 (332)
.++++|+++++++++.+. +++ +++.++ .+.+++++|++|+|+|+ |++|++++|+|+.+| +.+|+
T Consensus 129 ~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi 207 (410)
T cd08238 129 QDCLLIYEGDGYAEASLVE-PLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLV 207 (410)
T ss_pred CCeEECCCCCCHHHHhhcc-hHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEE
Confidence 689999999999998652 221 233332 24568899999999985 999999999999975 45799
Q ss_pred EEcCCcchHHHHHHc--------CCC-eeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEE
Q 043260 226 GIDKNPCRKDKGEAF--------GMT-DFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKV 296 (332)
Q Consensus 226 ~~~~~~~~~~~~~~l--------ga~-~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~ 296 (332)
+++++++|++.++++ |++ .++++.+ .+++.+.+++++++.++|++||++|.++.+..++++++++ |++
T Consensus 208 ~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~ 284 (410)
T cd08238 208 VTDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCL 284 (410)
T ss_pred EEcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeE
Confidence 999999999999997 776 5676643 1457778888888889999999999888999999999998 887
Q ss_pred EEEcCC-CC-CcccCChHhHhc-CcEEEEeeccc
Q 043260 297 MAIGAA-NE-AKVPLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 297 v~~G~~-~~-~~~~~~~~~~~~-~~~i~g~~~~~ 327 (332)
+.++.. .. ...++++..++. +++|.|+..++
T Consensus 285 v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 318 (410)
T cd08238 285 NFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN 318 (410)
T ss_pred EEEEccCCCCccccccHHHhhhcCcEEEEeCCCC
Confidence 776443 21 235677777766 99999987654
No 44
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=4.1e-39 Score=294.67 Aligned_cols=238 Identities=24% Similarity=0.347 Sum_probs=202.9
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCccccccccee
Q 043260 70 VLGHEGVGMVESIGDEVK------ELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLY 143 (332)
Q Consensus 70 v~G~e~~G~Vv~vG~~v~------~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~ 143 (332)
++|||++|+|+++|++|+ ++++||||++.+..+|+.|++|+.|++++|++.... |+...+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~~~~~----------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY--GHEALDS----------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc--CcccccC-----------
Confidence 579999999999999999 899999999999999999999999999999986544 4322100
Q ss_pred cccccCCceeeEEecCC-ceEEcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCC
Q 043260 144 HIFTCSTMTEYMVVDAN-YVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAA 222 (332)
Q Consensus 144 ~~~~~G~~a~~~~v~~~-~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~ 222 (332)
.....|+|+||+.+++. .++++|+++++++++.+++++.|+|+++ +.....+|++|||+|+|++|++++|+|+.+|++
T Consensus 68 ~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~ 146 (280)
T TIGR03366 68 GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAA 146 (280)
T ss_pred CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 00113569999999987 7999999999999999999999999987 445667999999999999999999999999995
Q ss_pred eEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCC
Q 043260 223 KIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAA 302 (332)
Q Consensus 223 ~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 302 (332)
+|++++++++|+++++++|++.+++..+ ..+.+.+++++.++|+|||++|.+..+.+++++++++ |+++.+|..
T Consensus 147 ~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~ 220 (280)
T TIGR03366 147 RVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGSV 220 (280)
T ss_pred EEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEeccC
Confidence 5999999999999999999999988643 2455677777778999999999888899999999998 999999976
Q ss_pred CC-CcccCChHhHhc-CcEEEEeeccc
Q 043260 303 NE-AKVPLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 303 ~~-~~~~~~~~~~~~-~~~i~g~~~~~ 327 (332)
.. ...++++..+++ +++|.|+..++
T Consensus 221 ~~~~~~~i~~~~~~~~~~~i~g~~~~~ 247 (280)
T TIGR03366 221 FPGGPVALDPEQVVRRWLTIRGVHNYE 247 (280)
T ss_pred CCCCceeeCHHHHHhCCcEEEecCCCC
Confidence 43 456788888777 99999987654
No 45
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=3e-38 Score=296.79 Aligned_cols=286 Identities=24% Similarity=0.417 Sum_probs=249.8
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGD 93 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 93 (332)
|||+++..++.++++++.+.|.+.++||+||+.++++|++|+. +.+..+...+|.++|||++|.|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 7999999887779999999999999999999999999999998 777665556788999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCC--ceEEcCCCCCh
Q 043260 94 IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN--YVVKVDPSIDL 171 (332)
Q Consensus 94 rV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~--~v~~lP~~~~~ 171 (332)
+|+..++.+|++|.+|+.|.+++|+++.+. |+..+| +|++|+.++.. .++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------------~~~~~~~v~~~~~~~~~iP~~~~~ 140 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQP--GFTHPG------------------SFAEYVAVPRADVNLVRLPDDVDF 140 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCccc--ccCCCC------------------cceeEEEcccccCceEECCCCCCH
Confidence 998878889999999999999999997543 443334 59999999974 99999999999
Q ss_pred hhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCC
Q 043260 172 SLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDE 251 (332)
Q Consensus 172 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 251 (332)
++++.++.++.|||+++.+..++.++++|+|+|+|++|++++++++..|+ +|+++++++++++.++++|++++++.+.
T Consensus 141 ~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~- 218 (345)
T cd08260 141 VTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE- 218 (345)
T ss_pred HHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc-
Confidence 99999999999999998777889999999999999999999999999999 8999999999999999999999998753
Q ss_pred CCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-Cc-ccCChHhHhc-CcEEEEeec
Q 043260 252 PNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AK-VPLNFPAIAL-GRNLKGTIF 325 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~-~~~~~~~~~~-~~~i~g~~~ 325 (332)
..++.+.+.++..+ ++|++||++|+...+...+++++++ |+++.+|.... .. .++++..++. ++++.++..
T Consensus 219 -~~~~~~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08260 219 -VEDVAAAVRDLTGG-GAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHG 292 (345)
T ss_pred -chhHHHHHHHHhCC-CCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCc
Confidence 24566777777777 8999999999767888999999998 99999998764 22 5667666644 888888754
No 46
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2.1e-38 Score=298.49 Aligned_cols=287 Identities=26% Similarity=0.418 Sum_probs=246.8
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCC------------CCCCCcccccceeEEEEE
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFP------------LPLFPRVLGHEGVGMVES 81 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~------------~~~~p~v~G~e~~G~Vv~ 81 (332)
|||+++..++.+++++++|.|++.++||+||+.++++|++|+. +.+.++ ...+|.++|||++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 7999998888779999999999999999999999999999998 766543 234578899999999999
Q ss_pred eCCCCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCc
Q 043260 82 IGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANY 161 (332)
Q Consensus 82 vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~ 161 (332)
+|++++.+++||+|+..|...|+.|.+|.++.+++|....+. |.... |+|++|+.++.+.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~~~~~~ 140 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL--GIFQD------------------GGYAEYVIVPHSR 140 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce--eeecc------------------CcceeeEEecHHH
Confidence 999999999999999999999999999999999999876544 33333 3599999999999
Q ss_pred eEEcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcC
Q 043260 162 VVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFG 241 (332)
Q Consensus 162 v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lg 241 (332)
++++|+++++.+++.+.+.+.|||+++.+...+.++++|+|+|+|++|++++|+|+..|+++|+++++++++++.++++|
T Consensus 141 ~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g 220 (350)
T cd08240 141 YLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAG 220 (350)
T ss_pred eeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhC
Confidence 99999999999999999999999999876666678999999988999999999999999978999999999999999999
Q ss_pred CCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHh-cCcEE
Q 043260 242 MTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIA-LGRNL 320 (332)
Q Consensus 242 a~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~i 320 (332)
++.+++.++ .++.+.+.+..++ ++|++||++|....+..++++++++ |+++.+|.... ...++...+. .++++
T Consensus 221 ~~~~~~~~~---~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~i 294 (350)
T cd08240 221 ADVVVNGSD---PDAAKRIIKAAGG-GVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGG-EATLPLPLLPLRALTI 294 (350)
T ss_pred CcEEecCCC---ccHHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCC-CCcccHHHHhhcCcEE
Confidence 999988876 6677778777776 8999999999767889999999998 99999998764 2223333333 38888
Q ss_pred EEeeccc
Q 043260 321 KGTIFGG 327 (332)
Q Consensus 321 ~g~~~~~ 327 (332)
.++....
T Consensus 295 ~~~~~~~ 301 (350)
T cd08240 295 QGSYVGS 301 (350)
T ss_pred EEcccCC
Confidence 8876543
No 47
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=7.4e-38 Score=296.87 Aligned_cols=305 Identities=29% Similarity=0.487 Sum_probs=252.5
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCC---CC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKE---LK 90 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~---~~ 90 (332)
|||+++..++.++.+++++.|.++++||+||+.++++|++|+. +.+.++. .+|.++|||++|+|+++|+++++ ++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 6899999887779999999999999999999999999999999 7776543 67889999999999999999988 99
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccc-c-ccccCCCCCcccc-cccceecccccCCceeeEEecCCceEEcCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFT-F-HGLMPDGSSRMSI-RGQKLYHIFTCSTMTEYMVVDANYVVKVDP 167 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~-~g~~~~g~~~~~~-~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~ 167 (332)
+||+|+..+..+|+.|.+|..+.+++|+...++ + .|-..+|...+-. .+.+. .....|+|++|+.++.+.++++|+
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~P~ 158 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPV-YMYSMGGLAEYAVVPATALAPLPE 158 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCcc-ccccCCcceeEEEechhhEEECCC
Confidence 999999989999999999999999999986521 1 0000111000000 00000 001236799999999999999999
Q ss_pred CCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeC
Q 043260 168 SIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFIN 247 (332)
Q Consensus 168 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~ 247 (332)
++++.+++.++.++.|||+++.+...+.++++|||+|+|++|++++++|+..|+..|++++.++++.+.++++|++.+++
T Consensus 159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~ 238 (367)
T cd08263 159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVN 238 (367)
T ss_pred CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEec
Confidence 99999999999999999999877778899999999988999999999999999844999999999999999999999999
Q ss_pred CCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhc-CcEEEEeec
Q 043260 248 PDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIAL-GRNLKGTIF 325 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~-~~~i~g~~~ 325 (332)
.+. .++.+.+.+++++.++|+|||++++.+.+..++++++++ |+++.+|.... ....++...++. ++++.++..
T Consensus 239 ~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (367)
T cd08263 239 AAK---EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYG 314 (367)
T ss_pred CCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCC
Confidence 876 778888888877778999999999855788999999998 99999997654 355677777644 888888643
No 48
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=7.3e-38 Score=293.82 Aligned_cols=282 Identities=26% Similarity=0.386 Sum_probs=239.5
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGF---PLPLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~---~~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
||++++.++++.+++.++|.|+|+++||+||++++++|++|+. +.+.. ....+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 6899999888789999999999999999999999999999998 55431 1234678899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||+|+..+..+|+.|++|+.+++++|+...+. +...+| +|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------------~~~~~~~v~~~~~~~iP~~l~ 140 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGV--GVNRPG------------------AFAEYLVIPAFNVWKIPDDIP 140 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCccee--eecCCC------------------cceeeEEechHHeEECcCCCC
Confidence 999999999999999999999999999876433 333333 599999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD 250 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 250 (332)
+++++.+ .++.++++++.. ...+|++|+|.|+|++|++++|+++.+|+++|+++++++++.++++++|+++++++++
T Consensus 141 ~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~ 217 (341)
T PRK05396 141 DDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK 217 (341)
T ss_pred HHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 9888855 466677665532 3468999999988999999999999999866888888999999999999999998876
Q ss_pred CCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEee
Q 043260 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTI 324 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~ 324 (332)
.++.+.+.+++++.++|+|||+.|....++.++++++++ |+++.+|.... ..+++...+.. ++++.++.
T Consensus 218 ---~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~ 287 (341)
T PRK05396 218 ---EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPG-DMAIDWNKVIFKGLTIKGIY 287 (341)
T ss_pred ---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC-CCcccHHHHhhcceEEEEEE
Confidence 678888888887779999999999877889999999998 99999997653 33444455555 78888875
No 49
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1.1e-37 Score=292.40 Aligned_cols=287 Identities=25% Similarity=0.448 Sum_probs=243.2
Q ss_pred eeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 043260 16 AAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDI 94 (332)
Q Consensus 16 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdr 94 (332)
|+++.+..+..+++++++.|++.++||+||+.++++|++|+. +.+.+...++|.++|||++|+|+++|++++.|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 578899998889999999999999999999999999999999 8776655667899999999999999999999999999
Q ss_pred EE-eecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhh
Q 043260 95 VI-PTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSL 173 (332)
Q Consensus 95 V~-~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~ 173 (332)
|+ .....+|++|.+|+++.+++|+.....+.|....+ ....|+|+||+.++.+.++++|+++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~ 147 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDG-------------TITQGGYADHIVVDERFVFKIPEGLDSAA 147 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcccccccCC-------------CcCCCcceeEEEechhheEECCCCCCHHH
Confidence 97 44557999999999999999988765432221111 12246799999999999999999999999
Q ss_pred hhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCC
Q 043260 174 AGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPN 253 (332)
Q Consensus 174 aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 253 (332)
++.+.+...+||+++. ...+++|++++|.|+|.+|++++++++.+|+ +|+++++++++++.++++|++.+++...
T Consensus 148 aa~l~~~~~ta~~~~~-~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~--- 222 (337)
T cd05283 148 AAPLLCAGITVYSPLK-RNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD--- 222 (337)
T ss_pred hhhhhhHHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc---
Confidence 9999999999999874 4568999999998889999999999999999 8999999999999999999999988765
Q ss_pred chHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeeccc
Q 043260 254 KSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 254 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 327 (332)
.+..+ .. +.++|++||+++....+.+++++++++ |+++.+|.... ..++++..++. ++++.++..+.
T Consensus 223 ~~~~~---~~--~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 290 (337)
T cd05283 223 PEAMK---KA--AGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEE-PLPVPPFPLIFGRKSVAGSLIGG 290 (337)
T ss_pred hhhhh---hc--cCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCC-CCccCHHHHhcCceEEEEecccC
Confidence 33322 11 347999999999865689999999998 99999998763 33677776555 99999987654
No 50
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=2e-37 Score=290.80 Aligned_cols=285 Identities=31% Similarity=0.408 Sum_probs=239.7
Q ss_pred eeeEEEecCCCCeEEEEEecCCCC-CCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPK-ATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
|||+++.++. .+++++++.|+|. ++||+||+.++++|++|+. +.+.++ ..+|.++|||++|+|+++|++++.+++|
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 6899998875 4999999999985 9999999999999999998 777654 3457899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCC--ceEEcCCCCC
Q 043260 93 DIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN--YVVKVDPSID 170 (332)
Q Consensus 93 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~--~v~~lP~~~~ 170 (332)
|+|+..+..+|+.|.+|+.+.+++|++.... |.. +. ....|+|++|+.++.+ .++++|++++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~------------~~~~g~~~~~~~v~~~~~~~~~~p~~l~ 142 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGLF--GYA--GS------------PNLDGAQAEYVRVPFADGTLLKLPDGLS 142 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCccc--ccc--cc------------CCCCCceeEEEEcccccCceEECCCCCC
Confidence 9999988899999999999999999876432 210 00 0012569999999864 9999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD 250 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 250 (332)
+++++.+++++.|||+++. ..++.+|++|||+|+|.+|++++++++.+|+.+|+++++++++.+.++++|++ .++.+.
T Consensus 143 ~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~ 220 (344)
T cd08284 143 DEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFED 220 (344)
T ss_pred HHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCC
Confidence 9999999999999999884 57889999999998899999999999999975799998888999999999986 455554
Q ss_pred CCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEe
Q 043260 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGT 323 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~ 323 (332)
.++.+.+.+++++.++|++||++++...+..++++++++ |+++.+|........++....+. ++++.+.
T Consensus 221 ---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 290 (344)
T cd08284 221 ---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAEEFPFPGLDAYNKNLTLRFG 290 (344)
T ss_pred ---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCCCccccHHHHhhcCcEEEEe
Confidence 567778888888779999999999877889999999998 99999998764333444444444 7777654
No 51
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.8e-37 Score=290.10 Aligned_cols=282 Identities=30% Similarity=0.436 Sum_probs=240.0
Q ss_pred eeeEEEecCCCCeEEEEEecCCC-CCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPP-KATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
||++++++++. +++++.|.|+| +++||+||+.++++|++|+. +.|.++ ...|.++|||++|+|+++|+++..+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccceEEEEEEeCCCCCccCCC
Confidence 78999998876 99999999996 89999999999999999998 777654 2457899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCC--ceEEcCCCCC
Q 043260 93 DIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN--YVVKVDPSID 170 (332)
Q Consensus 93 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~--~v~~lP~~~~ 170 (332)
|+|+..+..+|+.|.+|+.|+.++|.+..+. |...+| +|+||+.++.+ .++++|++++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------------~~~~~~~v~~~~~~~~~lP~~l~ 138 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGFW--GAFVDG------------------GQGEYVRVPLADGTLVKVPGSPS 138 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCcc--cCCCCC------------------ceEEEEEcchhhCceEECCCCCC
Confidence 9998867788999999999999999986654 444444 49999999875 9999999998
Q ss_pred hhhhh-----hcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCee
Q 043260 171 LSLAG-----FLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDF 245 (332)
Q Consensus 171 ~~~aa-----~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v 245 (332)
++.+. ++...+.+|++++ ..+++++|++|+|.|+|++|++++++|+..|+..++++++++++.++++++|++.+
T Consensus 139 ~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v 217 (345)
T cd08287 139 DDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDI 217 (345)
T ss_pred hhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceE
Confidence 82221 2225678899987 56789999999999889999999999999999568889888889999999999999
Q ss_pred eCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHh-HhcCcEEEEee
Q 043260 246 INPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPA-IALGRNLKGTI 324 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~~~~~~i~g~~ 324 (332)
+++.. .++.+.+.+++++.++|+++|++|++..+..++++++++ |+++.+|... ....+++.. +..++++.++.
T Consensus 218 ~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08287 218 VAERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPH-GGVELDVRELFFRNVGLAGGP 292 (345)
T ss_pred ecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccC-CCCccCHHHHHhcceEEEEec
Confidence 99987 778888888888789999999999877899999999998 9999999776 345566633 44488888754
No 52
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=3.4e-37 Score=288.73 Aligned_cols=279 Identities=30% Similarity=0.498 Sum_probs=242.6
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGD 93 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 93 (332)
|||++++.++. +++.+++.|++.++||+|||.++++|+.|+. ..+..+...+|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 68999998765 9999999999999999999999999999998 777665556688999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhh
Q 043260 94 IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSL 173 (332)
Q Consensus 94 rV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~ 173 (332)
+|+..++.+|+.|..|+.+.++.|++.... ++... |+|++|+.++.+ ++++|+++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~v~v~~~-~~~~p~~~~~~~ 138 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQVL--GVHRD------------------GGFAEYIVVPAD-ALLVPEGLSLDQ 138 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCee--eecCC------------------CcceeEEEechh-eEECCCCCCHHH
Confidence 999989999999999999999999755332 32222 459999999999 999999999999
Q ss_pred hhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCC
Q 043260 174 AGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPN 253 (332)
Q Consensus 174 aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 253 (332)
++++ ..+.++++++ +..++++|++|||+|+|.+|++++|+|+.+|+ +|+++.+++++.+.++++|+++++++..
T Consensus 139 aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~--- 212 (337)
T cd08261 139 AALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD--- 212 (337)
T ss_pred hhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc---
Confidence 9887 4778888877 77899999999999889999999999999999 8999989999999999999999998887
Q ss_pred chHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEe
Q 043260 254 KSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGT 323 (332)
Q Consensus 254 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~ 323 (332)
.++.+.+.+++++.++|++||++++...+..++++++++ |+++.+|... ....++...+.. ++++.++
T Consensus 213 ~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~ 281 (337)
T cd08261 213 EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK-GPVTFPDPEFHKKELTILGS 281 (337)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCC-CCCccCHHHHHhCCCEEEEe
Confidence 678888888887778999999998877889999999998 9999999776 345556555554 7777765
No 53
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=3.9e-37 Score=285.00 Aligned_cols=288 Identities=27% Similarity=0.434 Sum_probs=245.1
Q ss_pred eeeEEEecCC-CCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 15 AAAVVCWGEG-EPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 15 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
||++++++.+ ..+++++++.|++.++||+||+.++++|++|.. ..+.+.....|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 5789988755 359999999999999999999999999999998 77765334567899999999999999999999999
Q ss_pred CEEEeecc-cCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCCh
Q 043260 93 DIVIPTFI-GECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDL 171 (332)
Q Consensus 93 drV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~ 171 (332)
|+|+..+. .+|+.|++|.++..+.|+..... |...+ |+|++|+.++.+.++++|+++++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~v~~~~~~~lp~~~~~ 140 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKGI--GTQAD------------------GGFAEYVLVPEESLHELPENLSL 140 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCcee--eecCC------------------CceEEEEEcchHHeEECcCCCCH
Confidence 99987664 78999999999999999875322 32222 45999999999999999999999
Q ss_pred hhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEc--CCcchHHHHHHcCCCeeeCCC
Q 043260 172 SLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGID--KNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 172 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~--~~~~~~~~~~~lga~~v~~~~ 249 (332)
++++ +..++.++|+++....+++++++|||.|+|.+|++++++++.+|. +|+.+. .++++.+.++++|++++ ++.
T Consensus 141 ~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~~ 217 (306)
T cd08258 141 EAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NGG 217 (306)
T ss_pred HHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CCC
Confidence 9887 556888999998888899999999998889999999999999999 787763 34557788899999888 776
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeecccc
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFGGI 328 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~~~ 328 (332)
. .++.+.+.+++.+.++|++||++|....+...+++++++ |+++.+|........++...+++ +++|.|++++..
T Consensus 218 ~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 293 (306)
T cd08258 218 E---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTP 293 (306)
T ss_pred c---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCch
Confidence 6 778888888887778999999998767889999999998 99999998764346777777776 999999998764
Q ss_pred c
Q 043260 329 K 329 (332)
Q Consensus 329 ~ 329 (332)
.
T Consensus 294 ~ 294 (306)
T cd08258 294 A 294 (306)
T ss_pred H
Confidence 3
No 54
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=2.1e-37 Score=296.96 Aligned_cols=295 Identities=17% Similarity=0.227 Sum_probs=243.1
Q ss_pred ccceeeeEEEec--CCC---CeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCC----------CCCCCC-ccccc
Q 043260 11 KIYYAAAVVCWG--EGE---PWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGF----------PLPLFP-RVLGH 73 (332)
Q Consensus 11 ~~~~~~a~~~~~--~~~---~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~----------~~~~~p-~v~G~ 73 (332)
++.+|||+++.. .++ .+++.+++.|.|+++||+||+.++++|++|.. ..+.. +....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 467899999954 443 48999999999999999999999999999876 54421 111223 37999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCcee
Q 043260 74 EGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTE 153 (332)
Q Consensus 74 e~~G~Vv~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~ 153 (332)
|++|+|+++|++++.+++||+|+..+..+|++|.+|++|.+++|...... |+.. ..|+|+|
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~-----------------~~g~~ae 144 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIW--GYET-----------------NFGSFAE 144 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccc--cccC-----------------CCccceE
Confidence 99999999999999999999999999999999999999999999765322 3211 1246999
Q ss_pred eEEecCCceEEcCCCCChhhhhhcccchhhhHHHHHH--hhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 043260 154 YMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWK--EFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKN 230 (332)
Q Consensus 154 ~~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~--~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~ 230 (332)
|+.++.+.++++|+++++++++.+.+++.|||+++.. ..++.+|++|+|+|+ |++|++++++++.+|+ ++++++++
T Consensus 145 ~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~ 223 (398)
T TIGR01751 145 FALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSS 223 (398)
T ss_pred EEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCC
Confidence 9999999999999999999999999999999998754 467899999999998 9999999999999999 78888888
Q ss_pred cchHHHHHHcCCCeeeCCCCCC-------------------CchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhcc
Q 043260 231 PCRKDKGEAFGMTDFINPDDEP-------------------NKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKL 291 (332)
Q Consensus 231 ~~~~~~~~~lga~~v~~~~~~~-------------------~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~ 291 (332)
+++++.++++|++.++|..+.. ...+.+.+.+++++.++|++|||+|. ..+..+++++++
T Consensus 224 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l~~ 302 (398)
T TIGR01751 224 PEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVCRR 302 (398)
T ss_pred HHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhhcc
Confidence 9999999999999999875410 01355667788887789999999997 578999999999
Q ss_pred CCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeeccc
Q 043260 292 GKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 292 ~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 327 (332)
+ |+++.+|........++...+.. +.++.++.++.
T Consensus 303 ~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (398)
T TIGR01751 303 G-GMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFAN 338 (398)
T ss_pred C-CEEEEEccccCCCCCcCHHHHhhcccEEEccccCc
Confidence 8 99999998765335566665555 77888876543
No 55
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=3.6e-37 Score=288.43 Aligned_cols=283 Identities=29% Similarity=0.481 Sum_probs=239.1
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGD 93 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 93 (332)
||+++++++++...++++|.|.+.++||+|||.++++|++|+. +.+..+. ..|.++|||++|+|+++|++++.|++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 7899999887744489999999999999999999999999998 7776543 3477899999999999999999999999
Q ss_pred EEEeec-ccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChh
Q 043260 94 IVIPTF-IGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLS 172 (332)
Q Consensus 94 rV~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~ 172 (332)
+|+..| ..+|+.|..|..+.++.|.+.... |+..+| +|+||+.++.+.++++|++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------------~~~~~~~v~~~~~~~~p~~~~~~ 139 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKNA--GYTVDG------------------GMAEQCIVTADYAVKVPEGLDPA 139 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCcccc--CccccC------------------cceeEEEEchHHeEeCCCCCCHH
Confidence 998654 578999999999999999887543 554445 49999999999999999999999
Q ss_pred hhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHH-cCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCC
Q 043260 173 LAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARI-QGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDE 251 (332)
Q Consensus 173 ~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~-~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 251 (332)
+++.++.++.|||+++ +.+++++|++|||+|+|++|++++++++. .|. +|+++++++++++.++++|++.+++++.
T Consensus 140 ~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~- 216 (338)
T PRK09422 140 QASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR- 216 (338)
T ss_pred HeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-
Confidence 9999999999999988 77889999999999999999999999998 498 8999999999999999999999988742
Q ss_pred CCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeecc
Q 043260 252 PNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFG 326 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~ 326 (332)
..++.+.+++.++ ++|+++.+.++...+..++++++++ |+++.+|... ....++...+.. +..+.|+.+.
T Consensus 217 -~~~~~~~v~~~~~--~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 287 (338)
T PRK09422 217 -VEDVAKIIQEKTG--GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPP-ESMDLSIPRLVLDGIEVVGSLVG 287 (338)
T ss_pred -cccHHHHHHHhcC--CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCC-CCceecHHHHhhcCcEEEEecCC
Confidence 1445667777765 6896655556667899999999998 9999999765 334556555555 7788876643
No 56
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=2.8e-37 Score=294.77 Aligned_cols=288 Identities=27% Similarity=0.443 Sum_probs=238.5
Q ss_pred ceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCC------C-CCCCCcccccceeEEEEEeCC
Q 043260 13 YYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGF------P-LPLFPRVLGHEGVGMVESIGD 84 (332)
Q Consensus 13 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~------~-~~~~p~v~G~e~~G~Vv~vG~ 84 (332)
.++.+.++... .++++++|.|+++++||+||++++++|++|+. +.+.. + ...+|.++|||++|+|+++|+
T Consensus 27 ~~~~~~~~~~~--~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 104 (384)
T cd08265 27 TNLGSKVWRYP--ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGK 104 (384)
T ss_pred ccceeEEEeCC--CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECC
Confidence 44566666643 49999999999999999999999999999998 65321 1 135688999999999999999
Q ss_pred CCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEE
Q 043260 85 EVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVK 164 (332)
Q Consensus 85 ~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~ 164 (332)
+++.|++||+|+..+..+|+.|.+|+.|.+++|++.... |+..+| +|++|+.++.+.+++
T Consensus 105 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~--g~~~~g------------------~~~~~v~v~~~~~~~ 164 (384)
T cd08265 105 NVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKEL--GFSADG------------------AFAEYIAVNARYAWE 164 (384)
T ss_pred CCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCccee--eecCCC------------------cceeeEEechHHeEE
Confidence 999999999999999999999999999999999976543 554444 499999999999999
Q ss_pred cCCC-------CChhhhhhcccchhhhHHHHHHh-hCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHH
Q 043260 165 VDPS-------IDLSLAGFLSCGYSSGFGAAWKE-FKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDK 236 (332)
Q Consensus 165 lP~~-------~~~~~aa~l~~~~~ta~~al~~~-~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~ 236 (332)
+|++ ++++ ++++..++.+||+++... .++++|++|||+|+|++|++++++|+.+|+.+|++++++++|.++
T Consensus 165 lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~ 243 (384)
T cd08265 165 INELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNL 243 (384)
T ss_pred CCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence 9986 3455 555666889999998655 689999999999889999999999999998679999999999999
Q ss_pred HHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCCh-HHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHh
Q 043260 237 GEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVA-SLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIA 315 (332)
Q Consensus 237 ~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~ 315 (332)
++++|+++++++++....++.+.+.++++++++|+|+|++|+. ..+.+++++++++ |+++.+|.... ..++++..+.
T Consensus 244 ~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~ 321 (384)
T cd08265 244 AKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT-TVPLHLEVLQ 321 (384)
T ss_pred HHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC-CCcccHHHHh
Confidence 9999999999876411236778888888888999999999973 4778999999998 99999997653 3455555555
Q ss_pred c-CcEEEEeec
Q 043260 316 L-GRNLKGTIF 325 (332)
Q Consensus 316 ~-~~~i~g~~~ 325 (332)
. ..++.++..
T Consensus 322 ~~~~~l~~~~~ 332 (384)
T cd08265 322 VRRAQIVGAQG 332 (384)
T ss_pred hCceEEEEeec
Confidence 5 667877653
No 57
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=4.8e-37 Score=287.02 Aligned_cols=284 Identities=28% Similarity=0.445 Sum_probs=247.4
Q ss_pred eeeEEEecCCCC-eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCC-CCCCCcccccceeEEEEEeCCCCCCCCC
Q 043260 15 AAAVVCWGEGEP-WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFP-LPLFPRVLGHEGVGMVESIGDEVKELKE 91 (332)
Q Consensus 15 ~~a~~~~~~~~~-l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~-~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 91 (332)
||+++++.++++ +.+.+.+.|.+.+++|+||+.++++|+.|.. +.+.++ ...+|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 799999999887 6888888888999999999999999999998 777654 3456789999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCCh
Q 043260 92 GDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDL 171 (332)
Q Consensus 92 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~ 171 (332)
||+|+..|..+|+.|.+|+.++.+.|....+. |+..+| +|++|+.++.+.++++|+++++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------------~~~~~~~~~~~~~~~lp~~~~~ 140 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMP--GLGIDG------------------GFAEYIVVPARALVPVPDGVPF 140 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCcc--ccccCC------------------cceeeEEechHHeEECCCCCCH
Confidence 99999999999999999999999999776544 554444 5999999999999999999999
Q ss_pred hhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCC
Q 043260 172 SLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDE 251 (332)
Q Consensus 172 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 251 (332)
++++.++.++.|||+++.+...++++++|||.|+|.+|++++++|+..|+ +|++++.++++.+.++++|.+.+++..+
T Consensus 141 ~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~- 218 (338)
T cd08254 141 AQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD- 218 (338)
T ss_pred HHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCC-
Confidence 99999999999999998777889999999998889999999999999998 7999999999999999999999888776
Q ss_pred CCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeec
Q 043260 252 PNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIF 325 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~ 325 (332)
....+.+ +.+.+.++|+++|+++....+..++++|+++ |+++.+|... ....++...++. +.++.+++.
T Consensus 219 --~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~ 288 (338)
T cd08254 219 --DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGR-DKLTVDLSDLIARELRIIGSFG 288 (338)
T ss_pred --cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCC-CCCccCHHHHhhCccEEEEecc
Confidence 5555556 5566668999999999877889999999998 9999999765 334566666655 778887653
No 58
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=9.5e-38 Score=272.89 Aligned_cols=275 Identities=24% Similarity=0.316 Sum_probs=231.2
Q ss_pred eeecccccceeeeEEEecCCCC---eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEE
Q 043260 5 FHISFLKIYYAAAVVCWGEGEP---WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMV 79 (332)
Q Consensus 5 ~~~~~~~~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~V 79 (332)
+|.+.-++...|+++|.+.++| +++++.++|+....+|+||.+|+.|||+|++ ++|.||. +++|.+-|.|++|+|
T Consensus 10 ~ssa~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eV 89 (354)
T KOG0025|consen 10 SSSASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEV 89 (354)
T ss_pred cccccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEE
Confidence 4444556677899999998887 7788899998888889999999999999999 9999987 678999999999999
Q ss_pred EEeCCCCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecC
Q 043260 80 ESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDA 159 (332)
Q Consensus 80 v~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~ 159 (332)
+++|+++++|++||+|.... .+.|+|++|.+.++
T Consensus 90 v~vGs~vkgfk~Gd~VIp~~----------------------------------------------a~lGtW~t~~v~~e 123 (354)
T KOG0025|consen 90 VAVGSNVKGFKPGDWVIPLS----------------------------------------------ANLGTWRTEAVFSE 123 (354)
T ss_pred EEecCCcCccCCCCeEeecC----------------------------------------------CCCccceeeEeecc
Confidence 99999999999999998432 12368999999999
Q ss_pred CceEEcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchH----
Q 043260 160 NYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRK---- 234 (332)
Q Consensus 160 ~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~---- 234 (332)
+.++++++.++.+.||++..+.+|||++|.+.-++.+||+|+-.|+ +++|++.+|+|+++|++.|-++ |+....
T Consensus 124 ~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~ 202 (354)
T KOG0025|consen 124 SDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELK 202 (354)
T ss_pred cceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHH
Confidence 9999999999999999999999999999999999999999888898 9999999999999999555555 444333
Q ss_pred HHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhH
Q 043260 235 DKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAI 314 (332)
Q Consensus 235 ~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~ 314 (332)
+.++.+||++|+...+ -.-.+.....-....+.+.|||+|+. ...+..+.|.++ |+++.+|....++..++...+
T Consensus 203 ~~Lk~lGA~~ViTeee---l~~~~~~k~~~~~~~prLalNcVGGk-sa~~iar~L~~G-gtmvTYGGMSkqPv~~~ts~l 277 (354)
T KOG0025|consen 203 KQLKSLGATEVITEEE---LRDRKMKKFKGDNPRPRLALNCVGGK-SATEIARYLERG-GTMVTYGGMSKQPVTVPTSLL 277 (354)
T ss_pred HHHHHcCCceEecHHH---hcchhhhhhhccCCCceEEEeccCch-hHHHHHHHHhcC-ceEEEecCccCCCcccccchh
Confidence 3567799999986543 11111111112344689999999996 557889999998 999999998888889988888
Q ss_pred hc-CcEEEEeeccccccC
Q 043260 315 AL-GRNLKGTIFGGIKTK 331 (332)
Q Consensus 315 ~~-~~~i~g~~~~~~~~~ 331 (332)
++ +++++|+++..|..+
T Consensus 278 IFKdl~~rGfWvt~W~~~ 295 (354)
T KOG0025|consen 278 IFKDLKLRGFWVTRWKKE 295 (354)
T ss_pred eeccceeeeeeeeehhhc
Confidence 88 999999999998754
No 59
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=1.1e-36 Score=285.87 Aligned_cols=284 Identities=29% Similarity=0.417 Sum_probs=245.1
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGD 93 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 93 (332)
|||+++++++. +.+++.+.|++.+++|+||+.++++|+.|+. ..+.++....|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 68999998875 9999999999999999999999999999999 777654344577899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCc-----eEEcCCC
Q 043260 94 IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANY-----VVKVDPS 168 (332)
Q Consensus 94 rV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~-----v~~lP~~ 168 (332)
+|+..++.+|+.|++|.+|.++.|+...+. |...+ |+|++|+.++.+. ++++|++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~v~v~~~~~~~~~~~~lP~~ 139 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF--GNLYD------------------GGFAEYVRVPAWAVKRGGVLKLPDN 139 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCccee--ccCCC------------------CcceeeEEecccccccccEEECCCC
Confidence 999999999999999999999999887544 43333 3599999999988 9999999
Q ss_pred CChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCC
Q 043260 169 IDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINP 248 (332)
Q Consensus 169 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 248 (332)
+++.+++.+ .++.+||+++. ..++++|++|+|+|+|.+|++++++|+..|.+.|+++++++++.+.++++|.++++++
T Consensus 140 ~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~ 217 (343)
T cd08235 140 VSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDA 217 (343)
T ss_pred CCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecC
Confidence 999999876 68889999884 4589999999999889999999999999999339999999999998889999999988
Q ss_pred CCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhc-CcEEEEeec
Q 043260 249 DDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIAL-GRNLKGTIF 325 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~-~~~i~g~~~ 325 (332)
++ .++.+.+.++++++++|+|||++++...+..++++++++ |+++.+|.... ....++...+.. ++.+.++..
T Consensus 218 ~~---~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 292 (343)
T cd08235 218 AE---EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYA 292 (343)
T ss_pred Cc---cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEec
Confidence 87 778888888888878999999999867889999999998 99999997654 345666555555 777777654
No 60
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=8.9e-37 Score=289.17 Aligned_cols=289 Identities=27% Similarity=0.405 Sum_probs=233.7
Q ss_pred cceeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCC---CCCCCcccccceeEEEEEeCCCCC
Q 043260 12 IYYAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFP---LPLFPRVLGHEGVGMVESIGDEVK 87 (332)
Q Consensus 12 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~---~~~~p~v~G~e~~G~Vv~vG~~v~ 87 (332)
-.+++++++.++.. +++++.+.|.+.++||+||++++++|++|+. +.+... ...+|.++|||++|+|+++|++++
T Consensus 15 ~~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (364)
T PLN02702 15 EEENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVK 93 (364)
T ss_pred ccccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCC
Confidence 35666677776654 9999999999999999999999999999998 655221 123578899999999999999999
Q ss_pred CCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCC
Q 043260 88 ELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDP 167 (332)
Q Consensus 88 ~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~ 167 (332)
.|++||+|+..+..+|+.|.+|++|.++.|.+..+. +... ..|+|+||+.++.+.++++|+
T Consensus 94 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~--~~~~-----------------~~g~~~~y~~v~~~~~~~~P~ 154 (364)
T PLN02702 94 HLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFF--ATPP-----------------VHGSLANQVVHPADLCFKLPE 154 (364)
T ss_pred CCCCCCEEEEcCCCCCCCCcchhCcCcccCCCcccc--CCCC-----------------CCCcccceEEcchHHeEECCC
Confidence 999999999999999999999999999999874322 2110 124699999999999999999
Q ss_pred CCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeC
Q 043260 168 SIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFIN 247 (332)
Q Consensus 168 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~ 247 (332)
+++++++++. .++.++++++ ...++.+|++|+|+|+|++|++++++++.+|+..|++++++++|.++++++|++.+++
T Consensus 155 ~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~ 232 (364)
T PLN02702 155 NVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVL 232 (364)
T ss_pred CCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEe
Confidence 9999998863 2555688877 7788999999999988999999999999999966888998999999999999998876
Q ss_pred CCCCCCchHHHHHHHh--cCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEee
Q 043260 248 PDDEPNKSISELVKEM--THGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTI 324 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~--~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~ 324 (332)
+.. ...++.+.+.++ ..+.++|+|||++|+...+..++++++++ |+++.+|.... ...+....+.. ++++.+++
T Consensus 233 ~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~ 309 (364)
T PLN02702 233 VST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN-EMTVPLTPAAAREVDVVGVF 309 (364)
T ss_pred cCc-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC-CCcccHHHHHhCccEEEEec
Confidence 532 114455555544 23447999999999767899999999998 99999997643 24445555555 88898876
Q ss_pred c
Q 043260 325 F 325 (332)
Q Consensus 325 ~ 325 (332)
.
T Consensus 310 ~ 310 (364)
T PLN02702 310 R 310 (364)
T ss_pred c
Confidence 4
No 61
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=5.1e-37 Score=285.89 Aligned_cols=276 Identities=28% Similarity=0.407 Sum_probs=233.6
Q ss_pred eeeEEEecCC-CCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 15 AAAVVCWGEG-EPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 15 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
||++++.+++ +.+++++.+.|+++++||+||+.++++|++|+. +.+ .....+|.++|||++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 6899997665 458888888888999999999999999999998 654 2223457899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChh
Q 043260 93 DIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLS 172 (332)
Q Consensus 93 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~ 172 (332)
|+|+..+..+|+.|.+|+.|.+++|++..+. |+...| +|++|+.++.+.++++|++++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~--~~~~~g------------------~~~~~~~v~~~~~~~~p~~~~~~ 139 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGII--GVVSNG------------------GYAEYIVVPEKNLFKIPDSISDE 139 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCcccee--eccCCC------------------ceeeEEEcCHHHceeCCCCCCHH
Confidence 9999999999999999999999999987543 443333 59999999999999999999999
Q ss_pred hhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCC
Q 043260 173 LAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDE 251 (332)
Q Consensus 173 ~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 251 (332)
+++.+++++.+||+++. ..++++|++|+|+|+ |++|++++++|+.+|. +|++++ +.+.++++|++++++.++
T Consensus 140 ~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~----~~~~~~~~g~~~~~~~~~- 212 (325)
T cd08264 140 LAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVS----RKDWLKEFGADEVVDYDE- 212 (325)
T ss_pred HhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEe----HHHHHHHhCCCeeecchH-
Confidence 99999999999999885 488999999999998 9999999999999998 788875 347778899999887643
Q ss_pred CCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeecc
Q 043260 252 PNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFG 326 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~ 326 (332)
..+.+.+++ .++|+|+|++|+ ..+..++++++++ |+++.+|........++...++. +.++.++..+
T Consensus 213 ----~~~~l~~~~--~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (325)
T cd08264 213 ----VEEKVKEIT--KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGG 280 (325)
T ss_pred ----HHHHHHHHh--CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCCCCCCccCHHHHhhcCcEEEEccCC
Confidence 345566666 489999999998 5889999999998 99999997533346777777665 7788887544
No 62
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2e-36 Score=283.89 Aligned_cols=285 Identities=28% Similarity=0.474 Sum_probs=248.2
Q ss_pred eeeEEEecCC-CCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 043260 15 AAAVVCWGEG-EPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKELKE 91 (332)
Q Consensus 15 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~v 91 (332)
|||+++.+++ ..+++++++.|.+.++|++||+.++++|++|.. +.+.++. ...|.++|||++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7899998776 349999999999999999999999999999998 7765532 345778999999999999999999999
Q ss_pred CCEEEeec-ccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 92 GDIVIPTF-IGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 92 GdrV~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
||+|+..| ..+|+.|.+|+.+.+++|++..+. |+...| +|++|+.++.+.++++|++++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------------~~~s~~~~~~~~~~~lp~~~~ 140 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS--GYTVDG------------------TFAEYAIADARYVTPIPDGLS 140 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCcccc--ccccCC------------------cceeEEEeccccEEECCCCCC
Confidence 99998765 588999999999999999887544 554444 499999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 249 (332)
+++++.++..+.|||+++.. .++++++++||+|+ +.+|++++++++..|+ +|+++++++++.+.++++|++.+++++
T Consensus 141 ~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 218 (341)
T cd08297 141 FEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFK 218 (341)
T ss_pred HHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCC
Confidence 99999999999999998855 58999999999998 7799999999999999 999999999999999999999999887
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeec
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIF 325 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~ 325 (332)
. .++.+.+.++++++++|++||+.++...+..++++++++ |+++.+|.......+++...++. ++++.++..
T Consensus 219 ~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (341)
T cd08297 219 K---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLV 291 (341)
T ss_pred C---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCCCCCCCCHHHHHhcccEEEEecc
Confidence 6 678888888887779999999888777889999999998 99999997764344666666555 888888654
No 63
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=6.3e-37 Score=286.34 Aligned_cols=278 Identities=30% Similarity=0.463 Sum_probs=238.0
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGD 93 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 93 (332)
|||++++++++++++++.|.|++.++|++||++++++|++|+. ..+..+...+|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 7899999998889999999999999999999999999999998 777665556788999999999999999998899999
Q ss_pred EEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhh
Q 043260 94 IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSL 173 (332)
Q Consensus 94 rV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~ 173 (332)
+|++.+..+|+.|.+|..|.++.|....+. |...+| +|++|+.++.+.++++|+++++.+
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------------~~~~~~~~~~~~~~~lp~~~~~~~ 140 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGY--GEELDG------------------FFAEYAKVKVTSLVKVPPNVSDEG 140 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCcccccc--ccccCc------------------eeeeeeecchhceEECCCCCCHHH
Confidence 999988899999999999999999887543 433333 599999999999999999999999
Q ss_pred hhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCC
Q 043260 174 AGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEP 252 (332)
Q Consensus 174 aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 252 (332)
++.+++++.+||+++.+. .++++++|+|+|+ |.+|++++++++..|+ +|+++++++++++.++++ ++++++.+
T Consensus 141 ~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~--- 214 (334)
T PRK13771 141 AVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS--- 214 (334)
T ss_pred hhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch---
Confidence 999999999999988555 8999999999998 9999999999999999 899999999999988888 77776553
Q ss_pred CchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhc-CcEEEEeec
Q 043260 253 NKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIAL-GRNLKGTIF 325 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~-~~~i~g~~~ 325 (332)
++.+.++++ + ++|++||++|+. .+.+++++++++ |+++.+|.... ...+++...++. ++++.+++.
T Consensus 215 --~~~~~v~~~--~-~~d~~ld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (334)
T PRK13771 215 --KFSEEVKKI--G-GADIVIETVGTP-TLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHIS 282 (334)
T ss_pred --hHHHHHHhc--C-CCcEEEEcCChH-HHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecC
Confidence 345556654 3 699999999984 788999999998 99999998654 222344333333 888888753
No 64
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=5.1e-37 Score=286.20 Aligned_cols=260 Identities=20% Similarity=0.214 Sum_probs=219.4
Q ss_pred eeeEEEecCCC-----CeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCC
Q 043260 15 AAAVVCWGEGE-----PWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVK 87 (332)
Q Consensus 15 ~~a~~~~~~~~-----~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~ 87 (332)
|||+++++++. .++++++|.|+|+++||+||+.++++|++|+. +.|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 78999998874 37888999999999999999999999999999 7776543 45789999999999999999999
Q ss_pred C-CCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcC
Q 043260 88 E-LKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVD 166 (332)
Q Consensus 88 ~-~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP 166 (332)
+ |++||+|+..+. .+ |+|+||+.++++.++++|
T Consensus 81 ~~~~vGd~V~~~~~----------------------------~~------------------g~~a~~~~v~~~~~~~iP 114 (324)
T cd08291 81 AQSLIGKRVAFLAG----------------------------SY------------------GTYAEYAVADAQQCLPLP 114 (324)
T ss_pred ccCCCCCEEEecCC----------------------------CC------------------CcchheeeecHHHeEECC
Confidence 6 999999984210 01 359999999999999999
Q ss_pred CCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEE-CC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCe
Q 043260 167 PSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVF-GL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTD 244 (332)
Q Consensus 167 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~-G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~ 244 (332)
+++++++++.+++.+.|||..+ +.... ++++++|+ |+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++
T Consensus 115 ~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 191 (324)
T cd08291 115 DGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEY 191 (324)
T ss_pred CCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcE
Confidence 9999999998888888998544 55555 56666665 54 9999999999999999 8999999999999999999999
Q ss_pred eeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcc-cCChHhHhc-CcEEEE
Q 043260 245 FINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKV-PLNFPAIAL-GRNLKG 322 (332)
Q Consensus 245 v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~-~~~~~~~~~-~~~i~g 322 (332)
+++++. .++.+.++++++++++|++||++|+. .....+++++++ |+++.+|....... .++...++. ++++.|
T Consensus 192 ~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08291 192 VLNSSD---PDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEG 266 (324)
T ss_pred EEECCC---ccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEE
Confidence 999877 78888898888888999999999985 667889999998 99999997654222 366666555 999999
Q ss_pred eecccc
Q 043260 323 TIFGGI 328 (332)
Q Consensus 323 ~~~~~~ 328 (332)
+....+
T Consensus 267 ~~~~~~ 272 (324)
T cd08291 267 FWLTTW 272 (324)
T ss_pred EEHHHh
Confidence 987664
No 65
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=3.9e-37 Score=285.32 Aligned_cols=252 Identities=20% Similarity=0.295 Sum_probs=200.7
Q ss_pred eeeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecC-ccccc-ccCCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 043260 14 YAAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASIC-HTDVL-SSKGFPL---PLFPRVLGHEGVGMVESIGDEVKE 88 (332)
Q Consensus 14 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~-~~D~~-~~g~~~~---~~~p~v~G~e~~G~Vv~vG~~v~~ 88 (332)
+|||+++++++. +++++.+.|+|+++||||||++++|| ++|+. +.|.++. ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 589999998875 99999999999999999999999996 79998 7776543 3579999999999999999998 5
Q ss_pred CCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCC
Q 043260 89 LKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPS 168 (332)
Q Consensus 89 ~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~ 168 (332)
|++||||++. |..|..|.. | . .|+|+||+.++++.++++|++
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~--------------~--~------------------~G~~aey~~v~~~~~~~ip~~ 120 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVR--------------G--L------------------FGGASKRLVTPASRVCRLDPA 120 (308)
T ss_pred CCCCCEEEEe----Ccccccccc--------------c--c------------------CCcccceEEcCHHHceeCCCC
Confidence 9999999863 223332210 0 0 246999999999999999999
Q ss_pred CChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCC
Q 043260 169 IDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINP 248 (332)
Q Consensus 169 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 248 (332)
++++. +.++ ++.|||+++.+ . ..+++++||+|+|++|++++|+|+.+|++.|++++.+++|++.++++ .++++
T Consensus 121 ~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~ 193 (308)
T TIGR01202 121 LGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDP 193 (308)
T ss_pred CCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccCh
Confidence 99864 5554 67899998844 3 34688999999999999999999999996677788887777766543 45554
Q ss_pred CCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeeccc
Q 043260 249 DDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 327 (332)
.+ . .+.++|+|||++|+...++.++++++++ |+++.+|... ...++++..++. ++++.|+...+
T Consensus 194 ~~---~----------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~i~~~~~~~ 258 (308)
T TIGR01202 194 EK---D----------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYT-EPVNFDFVPAFMKEARLRIAAEWQ 258 (308)
T ss_pred hh---c----------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecC-CCcccccchhhhcceEEEEecccc
Confidence 32 1 2347999999999977889999999998 9999999876 345666555555 88999876543
No 66
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=3.2e-36 Score=286.58 Aligned_cols=287 Identities=26% Similarity=0.374 Sum_probs=236.5
Q ss_pred eeeEEEecCCCCeEEEEEecCCC-CCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPP-KATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
||++++.+++ +++++++|.|.+ +++||+|||+++++|++|+. ..|..+ ..+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~-~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPG-NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCC-ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 6899998887 499999999996 79999999999999999999 777655 3568899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCcccCCCCcccc----ccccCCCCCcccccccceecccccCCceeeEEecCC--ceEEcC
Q 043260 93 DIVIPTFIGECRECENCTSEMANLCLKYPFTF----HGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN--YVVKVD 166 (332)
Q Consensus 93 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~----~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~--~v~~lP 166 (332)
|+|+..+..+|+.|.+|++|..++|.+..... .|+.. . ....|+|+||+.++.+ .++++|
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~--~------------~~~~g~~a~y~~v~~~~~~~~~lP 144 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVD--M------------GPYGGGQAEYLRVPYADFNLLKLP 144 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccc--c------------CCCCCeeeeEEEeecccCcEEECC
Confidence 99999999999999999999999998743221 11100 0 0013579999999975 899999
Q ss_pred CCCChh---hhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCC
Q 043260 167 PSIDLS---LAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMT 243 (332)
Q Consensus 167 ~~~~~~---~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~ 243 (332)
++++++ +++.+..++.|||+++ ..+++++|++|+|.|+|++|++++|+++.+|..+|++++++++|+++++++|++
T Consensus 145 ~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~ 223 (375)
T cd08282 145 DRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI 223 (375)
T ss_pred CCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe
Confidence 999998 5677888899999998 788999999999998899999999999999976799999999999999999984
Q ss_pred eeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChH-----------HHHHHHHHhccCCcEEEEEcCCCC-C------
Q 043260 244 DFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVAS-----------LISEALEATKLGKGKVMAIGAANE-A------ 305 (332)
Q Consensus 244 ~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~-----------~~~~~~~~l~~~~G~~v~~G~~~~-~------ 305 (332)
.+++.+ .++.+.+.++++ .++|++||++|... .+..++++++++ |+++.+|.... .
T Consensus 224 -~v~~~~---~~~~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~ 297 (375)
T cd08282 224 -PIDFSD---GDPVEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDA 297 (375)
T ss_pred -EeccCc---ccHHHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccc
Confidence 566665 667778888777 58999999999752 588999999998 99998887542 1
Q ss_pred -----cccCChHhHhc-CcEEEEee
Q 043260 306 -----KVPLNFPAIAL-GRNLKGTI 324 (332)
Q Consensus 306 -----~~~~~~~~~~~-~~~i~g~~ 324 (332)
...++...+.. +..+.++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (375)
T cd08282 298 AAKQGELSFDFGLLWAKGLSFGTGQ 322 (375)
T ss_pred cccCccccccHHHHHhcCcEEEEec
Confidence 13455555544 66665553
No 67
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=3.7e-36 Score=279.58 Aligned_cols=267 Identities=23% Similarity=0.367 Sum_probs=227.8
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGD 93 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 93 (332)
|||+++.+++ ++++++++.|+++++||+||+.++++|++|.. ..+.++ +|.++|||++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGL-DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCC-cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 6899999876 49999999999999999999999999999998 777543 5788999999999999998 68999
Q ss_pred EEEeecccCCCCCcccccCCcccCCCCcccccccc-CCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChh
Q 043260 94 IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLM-PDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLS 172 (332)
Q Consensus 94 rV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~ 172 (332)
||...+..+|+.|.+|..|..+.|...... ++. .+| +|++|+.++.++++++|++++++
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g------------------~~~~~~~v~~~~~~~lP~~~~~~ 133 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTVL--GIVDRDG------------------AFAEYLTLPLENLHVVPDLVPDE 133 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCccc--CccCCCC------------------ceEEEEEechHHeEECcCCCCHH
Confidence 999999999999999999999999886544 331 233 59999999999999999999998
Q ss_pred hhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCC
Q 043260 173 LAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEP 252 (332)
Q Consensus 173 ~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 252 (332)
+++.+ .++.+++..+ +..++++|++|||+|+|.+|++++|+++.+|+ +|++++.++++++.++++|++.+++...
T Consensus 134 ~aa~~-~~~~~~~~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~-- 208 (319)
T cd08242 134 QAVFA-EPLAAALEIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA-- 208 (319)
T ss_pred Hhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc--
Confidence 88864 3555666644 77889999999999889999999999999999 7999999999999999999998887653
Q ss_pred CchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeec
Q 043260 253 NKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIF 325 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~ 325 (332)
. +++.++|++||++|+...+..++++++++ |+++..+... ....++...+.. +.++.++..
T Consensus 209 -~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~-~~~~~~~~~~~~~~~~i~~~~~ 270 (319)
T cd08242 209 -E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYA-GPASFDLTKAVVNEITLVGSRC 270 (319)
T ss_pred -c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCccCHHHheecceEEEEEec
Confidence 1 34568999999999877889999999998 9999987655 445666666555 888888754
No 68
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.5e-36 Score=282.02 Aligned_cols=280 Identities=32% Similarity=0.486 Sum_probs=235.8
Q ss_pred eEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCC-CCC--CCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 17 AVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKG-FPL--PLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 17 a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~-~~~--~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
|++++++. .+++++++.|.+.++||+|||.++++|+.|+. +.+. .+. ..+|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~-~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPG-DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCC-ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 46788885 49999999999999999999999999999987 5322 111 2457789999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCcccCCCCccccccc-cCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCCh
Q 043260 93 DIVIPTFIGECRECENCTSEMANLCLKYPFTFHGL-MPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDL 171 (332)
Q Consensus 93 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~ 171 (332)
|+|+..+..+|+.|.+|+.|.+++|++..+. +. ..+ |+|++|+.++.+.++++|+++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~v~~~~~~~lP~~~~~ 139 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATPPVD------------------GTLCRYVNHPADFCHKLPDNVSL 139 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc--ccccCC------------------CceeeeEEecHHHcEECcCCCCH
Confidence 9999999999999999999999999875432 11 112 45999999999999999999999
Q ss_pred hhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCC
Q 043260 172 SLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDE 251 (332)
Q Consensus 172 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 251 (332)
++++.+ .++.+|++++ +.+++++|++++|.|+|++|++++|+|+.+|.+.|+++++++++.+.++++|++.+++.+.
T Consensus 140 ~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~- 216 (343)
T cd05285 140 EEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT- 216 (343)
T ss_pred HHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc-
Confidence 999877 5888999987 7889999999999988999999999999999844999999999999999999999998876
Q ss_pred CCch---HHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEee
Q 043260 252 PNKS---ISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTI 324 (332)
Q Consensus 252 ~~~~---~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~ 324 (332)
.+ +.+.+.+.++++++|+|||+.|+...+...+++++++ |+++.+|.... ...+++..+.. ++++.++.
T Consensus 217 --~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 289 (343)
T cd05285 217 --EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKP-EVTLPLSAASLREIDIRGVF 289 (343)
T ss_pred --ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC-CCccCHHHHhhCCcEEEEec
Confidence 44 3677777787778999999999866889999999998 99999997653 34555554454 77777764
No 69
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=5.1e-36 Score=281.43 Aligned_cols=281 Identities=30% Similarity=0.412 Sum_probs=233.8
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGF---PLPLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~---~~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
||+++++.++..+++.+.+.|+|.++|++||++++++|++|+. +.+.. .....|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 6899999887679999999999999999999999999999987 54321 1234577899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||+|+..+..+|+.|++|+.+.+++|+... ..|...+ |+|++|+.++.++++++|++++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------------------g~~~~~v~v~~~~~~~lP~~~~ 140 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTK--ILGVDTD------------------GCFAEYVVVPEENLWKNDKDIP 140 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccc--eEeccCC------------------CcceEEEEechHHcEECcCCCC
Confidence 9999999899999999999999999998643 2343333 3599999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD 250 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 250 (332)
++.+ ++..++.++++++. ....+|++|||.|+|.+|++++++++.+|.++|++++++++|.+.++++|++++++.+.
T Consensus 141 ~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~ 217 (341)
T cd05281 141 PEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPRE 217 (341)
T ss_pred HHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCccc
Confidence 8555 45567888888763 45679999999988999999999999999866888888889999999999999988766
Q ss_pred CCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChH--hHhcCcEEEEee
Q 043260 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFP--AIALGRNLKGTI 324 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~--~~~~~~~i~g~~ 324 (332)
.++. .+.+++++.++|++||++|+...+..++++|+++ |+++.+|.... ...+++. .++.++.+.++.
T Consensus 218 ---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 287 (341)
T cd05281 218 ---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPG-PVDIDLNNLVIFKGLTVQGIT 287 (341)
T ss_pred ---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC-CcccccchhhhccceEEEEEe
Confidence 6677 7888888779999999999877889999999998 99999997653 2333322 233377777765
No 70
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=6e-36 Score=278.15 Aligned_cols=259 Identities=22% Similarity=0.297 Sum_probs=225.0
Q ss_pred eeeEEEecCCCC---eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCC-CCCCCcccccceeEEEEEeCCCCCCC
Q 043260 15 AAAVVCWGEGEP---WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFP-LPLFPRVLGHEGVGMVESIGDEVKEL 89 (332)
Q Consensus 15 ~~a~~~~~~~~~---l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~-~~~~p~v~G~e~~G~Vv~vG~~v~~~ 89 (332)
|||+++.+++.+ ++++++|.|.+.++||+|||.++++|++|+. +.|.++ ...+|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 689999887643 7889999999999999999999999999998 777654 24568899999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCC
Q 043260 90 KEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSI 169 (332)
Q Consensus 90 ~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~ 169 (332)
++||+|+..+ . .|+|++|+.++...++++|+++
T Consensus 81 ~~Gd~V~~~~-----------------------------~------------------~g~~~~~~~~~~~~~~~ip~~~ 113 (324)
T cd08292 81 QVGQRVAVAP-----------------------------V------------------HGTWAEYFVAPADGLVPLPDGI 113 (324)
T ss_pred CCCCEEEecc-----------------------------C------------------CCcceeEEEEchHHeEECCCCC
Confidence 9999998431 1 1459999999999999999999
Q ss_pred ChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCC
Q 043260 170 DLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINP 248 (332)
Q Consensus 170 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 248 (332)
++++++.+++.+.+||+++ ...++++|++|||+|+ |.+|++++|+|+.+|+ +++++..++++++.++++|++.+++.
T Consensus 114 ~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (324)
T cd08292 114 SDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVST 191 (324)
T ss_pred CHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcC
Confidence 9999999988889999987 5688999999999987 9999999999999999 88988888888888888999999988
Q ss_pred CCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeeccc
Q 043260 249 DDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 327 (332)
.+ .++.+.+.++++++++|+|||++|+. .+..++++++++ |+++.+|.......++++..++. ++++.++....
T Consensus 192 ~~---~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08292 192 EQ---PGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLGEG-GTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGR 266 (324)
T ss_pred CC---chHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhcCC-cEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHH
Confidence 76 78888899999888999999999984 778999999998 99999997643445566655555 89999987654
No 71
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.4e-35 Score=276.20 Aligned_cols=278 Identities=31% Similarity=0.471 Sum_probs=235.8
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGD 93 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 93 (332)
|||+++..+.+++.+++.|.|.+.++||+|+++++++|++|+. ..+..+....|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 6899998755669999999999999999999999999999999 777666566788999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhh
Q 043260 94 IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSL 173 (332)
Q Consensus 94 rV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~ 173 (332)
+|+..++..|++|.+|+.+.+++|++... .|...+ |+|++|+.++...++++|+++++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~v~~~~~~~ip~~~~~~~ 140 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRAE--YGEEVD------------------GGFAEYVKVPERSLVKLPDNVSDES 140 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCccc--cccccC------------------CeeeeEEEechhheEECCCCCCHHH
Confidence 99999989999999999999999998632 243333 4599999999999999999999999
Q ss_pred hhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCC
Q 043260 174 AGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEP 252 (332)
Q Consensus 174 aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 252 (332)
++.+++++.+||+++.. ..+++++++||+|+ |.+|++++++++..|. +|+++.+++++.+.++++|.+.+++..
T Consensus 141 ~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~--- 215 (332)
T cd08259 141 AALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS--- 215 (332)
T ss_pred HhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH---
Confidence 99999999999999865 88999999999998 9999999999999999 899998888888888889988877553
Q ss_pred CchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEee
Q 043260 253 NKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTI 324 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~ 324 (332)
. +.+.+.+.. ++|++++++|.. ....++++++++ |+++.+|........++...... +..+.++.
T Consensus 216 -~-~~~~~~~~~---~~d~v~~~~g~~-~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (332)
T cd08259 216 -K-FSEDVKKLG---GADVVIELVGSP-TIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGLLILKEIRIIGSI 281 (332)
T ss_pred -H-HHHHHHhcc---CCCEEEECCChH-HHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHHHHhCCcEEEEec
Confidence 2 555565543 699999999985 688999999998 99999997654222234333333 77777664
No 72
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.3e-35 Score=276.80 Aligned_cols=286 Identities=23% Similarity=0.391 Sum_probs=242.2
Q ss_pred eeeEEEecCCC--CeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEGE--PWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
|||+++...+. .+++.+.+.|.+.+++|+||+.++++|++|+. +.|..+. ..+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 68999884332 37788888888899999999999999999998 7765432 35688999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||+|++.+..+|+.|.+|.++.+++|+...+. |...+ |+|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~------------------g~~~~~~~~~~~~~~~~p~~~~ 140 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGIL--GEHVD------------------GGYAEYVAVPARNLLPIPDNLS 140 (342)
T ss_pred CCCEEEEccccccccchhhcccccccccccccc--ccccC------------------cceeEEEEechHHceeCCCCCC
Confidence 999999999999999999999999999875332 43333 3599999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 249 (332)
+++++.+++++.+|++++.+...+.++++++|+|+ +.+|++++++++..|+ +|+++++++++++.+++++.+.+++..
T Consensus 141 ~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (342)
T cd08266 141 FEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYR 219 (342)
T ss_pred HHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEecC
Confidence 99999999899999999878888999999999998 7999999999999999 899999999999988888988888776
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHh-cCcEEEEeecc
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIA-LGRNLKGTIFG 326 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~i~g~~~~ 326 (332)
+ .++.+.+.+.+.+.++|++++++|. ..+..++++++++ |+++.+|........++....+ .++++.++...
T Consensus 220 ~---~~~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
T cd08266 220 K---EDFVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMG 292 (342)
T ss_pred C---hHHHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCCCCCcCHHHHhhcceEEEEEecC
Confidence 5 6777777777766689999999998 4788999999998 9999999776533455553333 38888887644
No 73
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=2.2e-35 Score=277.08 Aligned_cols=284 Identities=29% Similarity=0.440 Sum_probs=241.3
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGD 93 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 93 (332)
|||+++++.+. +.+++.+.|+++++||+||+.++++|++|+. +.+.+ ....|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 68999998865 9999999999999999999999999999998 76654 234578899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhh
Q 043260 94 IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSL 173 (332)
Q Consensus 94 rV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~ 173 (332)
+|+..+...|+.|.+|..|.+..|...... |...+ |+|++|+.++.+.++++|+++++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~~~~~~~~~lP~~~~~~~ 138 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDYI--GSRRD------------------GAFAEYVSVPARNLIKIPDHVDYEE 138 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcceE--ecccC------------------CcccceEEechHHeEECcCCCCHHH
Confidence 999999999999999999999999886433 33233 4599999999999999999999999
Q ss_pred hhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCC
Q 043260 174 AGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPN 253 (332)
Q Consensus 174 aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 253 (332)
++++ .++.+||+++. ..+++++++|+|+|+|.+|++++|+|+.+|+..|+++++++++.++++++|++.+++.+.
T Consensus 139 aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--- 213 (343)
T cd08236 139 AAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--- 213 (343)
T ss_pred HHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc---
Confidence 9888 57889999884 778999999999988999999999999999944999999999999999999999998876
Q ss_pred chHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-Cc-ccCChHhHhc-CcEEEEeeccc
Q 043260 254 KSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AK-VPLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 254 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~-~~~~~~~~~~-~~~i~g~~~~~ 327 (332)
.. .+.+.+..+++++|++||+++....+..++++++++ |+++.+|.... .. ...++..++. +.++.++....
T Consensus 214 ~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (343)
T cd08236 214 ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSY 288 (343)
T ss_pred cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecc
Confidence 55 667777777778999999998877889999999998 99999997653 11 2223333344 88888887643
No 74
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.4e-35 Score=276.62 Aligned_cols=275 Identities=28% Similarity=0.431 Sum_probs=235.0
Q ss_pred eeeEEEecCCC----CeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 043260 15 AAAVVCWGEGE----PWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKEL 89 (332)
Q Consensus 15 ~~a~~~~~~~~----~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~ 89 (332)
||++++.++++ ++++.+.+.|.+.++||+||+.++++|++|+. +.|..+...+|.++|||++|+|+++|++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 68999988873 58888888888999999999999999999999 87776655678899999999999999999999
Q ss_pred CCCCEEEeecc-cCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCC
Q 043260 90 KEGDIVIPTFI-GECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPS 168 (332)
Q Consensus 90 ~vGdrV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~ 168 (332)
++||+|+..+. .+|+.|.+|..+.+++|....+. |+..+| +|++|+.++.+.++++|++
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------------~~~~~~~~~~~~~~~lp~~ 140 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT--GYTVDG------------------GYAEYMVADERFAYPIPED 140 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc--ccccCC------------------ceEEEEEecchhEEECCCC
Confidence 99999976544 68999999999999999987655 554444 4999999999999999999
Q ss_pred CChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCC
Q 043260 169 IDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINP 248 (332)
Q Consensus 169 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 248 (332)
+++.+++.+++++.|||+++ +.++++++++++|+|+|++|++++++++..|. +|++++.++++++.++++|++.+++.
T Consensus 141 ~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 218 (329)
T cd08298 141 YDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDS 218 (329)
T ss_pred CCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEecc
Confidence 99999999999999999998 88999999999999999999999999999998 99999999999999999999888876
Q ss_pred CCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhcCcEEEEeec
Q 043260 249 DDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIALGRNLKGTIF 325 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~g~~~ 325 (332)
.. . .++++|+++++.+....+..++++++++ |+++.+|........+++..+..+..|.++..
T Consensus 219 ~~---~----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~ 281 (329)
T cd08298 219 DD---L----------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMSDIPAFDYELLWGEKTIRSVAN 281 (329)
T ss_pred Cc---c----------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCCCCCccchhhhhCceEEEEecC
Confidence 54 1 2347999999987777899999999998 99999986432223344444334667766543
No 75
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=1.7e-35 Score=276.32 Aligned_cols=280 Identities=27% Similarity=0.454 Sum_probs=237.4
Q ss_pred eeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 043260 16 AAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDI 94 (332)
Q Consensus 16 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdr 94 (332)
||+++++++..+++++.+.|.+.+++++|++.++++|++|+. +.+..+...+|.++|||++|+|+++|++++++++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 688999886669999999999999999999999999999998 7776555567889999999999999999999999999
Q ss_pred EEeecc-cCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhh
Q 043260 95 VIPTFI-GECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSL 173 (332)
Q Consensus 95 V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~ 173 (332)
|++.++ .+|++|.+|++++.+.|++..+. ++..+| +|++|+.++...++++|+++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------------~~~~~~~v~~~~~~~~p~~~~~~~ 140 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT--GYTTQG------------------GYAEYMVADAEYTVLLPDGLPLAQ 140 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCcccc--CcccCC------------------ccccEEEEcHHHeEECCCCCCHHH
Confidence 988665 78999999999999999997655 433333 599999999999999999999999
Q ss_pred hhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCC
Q 043260 174 AGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPN 253 (332)
Q Consensus 174 aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 253 (332)
++.+.+.+.+||+++.. ..++++++|||+|+|.+|++++++++..|. +|+++++++++.+.++++|++.+++...
T Consensus 141 ~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--- 215 (330)
T cd08245 141 AAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA--- 215 (330)
T ss_pred hhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC---
Confidence 99999999999998844 789999999999988899999999999999 8999999999999999999998887654
Q ss_pred chHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeecc
Q 043260 254 KSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFG 326 (332)
Q Consensus 254 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~ 326 (332)
...... .. .++|++|+++++...+..++++++++ |+++.+|........++...++. +.++.++..+
T Consensus 216 ~~~~~~----~~-~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (330)
T cd08245 216 ELDEQA----AA-GGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHG 283 (330)
T ss_pred cchHHh----cc-CCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCCccccchHHHHhCCCEEEEeccC
Confidence 333222 22 37999999988777889999999998 99999997653323333444544 7788887654
No 76
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=6.7e-35 Score=272.54 Aligned_cols=281 Identities=28% Similarity=0.427 Sum_probs=239.2
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGD 93 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 93 (332)
|||+++.+++. +++.+.+.|++.++||+||+.++++|+.|+. ..|.++. .+|.++|+|++|+|+.+|++++.+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 68999998875 9999999999999999999999999999999 7776543 3788999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhh
Q 043260 94 IVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSL 173 (332)
Q Consensus 94 rV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~ 173 (332)
+|+..+...|+.|.+|..+.++.|+..... |...+| +|++|+.++.++++++|+++++.+
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------------~~~~~~~v~~~~~~~lP~~~~~~~ 138 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTAV--GVTRNG------------------GFAEYVVVPAKQVYKIPDNLSFEE 138 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCccee--ccCCCC------------------cceeEEEecHHHcEECcCCCCHHH
Confidence 999999999999999999999999887532 332333 599999999999999999999999
Q ss_pred hhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCC
Q 043260 174 AGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPN 253 (332)
Q Consensus 174 aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 253 (332)
++.+ .++.++++++ +.+++++|+++||+|+|.+|.+++++++..|++.|+++++++++.+.++++|++.+++...
T Consensus 139 aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--- 213 (334)
T cd08234 139 AALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR--- 213 (334)
T ss_pred Hhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC---
Confidence 9876 6888999987 7889999999999988999999999999999944899999999999999999988888765
Q ss_pred chHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhc-CcEEEEeec
Q 043260 254 KSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIAL-GRNLKGTIF 325 (332)
Q Consensus 254 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~-~~~i~g~~~ 325 (332)
.++... +.+.+.++|++||+++....+..++++++++ |+++.+|.... ....++...+.. ++++.++..
T Consensus 214 ~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (334)
T cd08234 214 EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFI 284 (334)
T ss_pred CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEecc
Confidence 444444 4455568999999998767889999999998 99999997653 345555555553 778877653
No 77
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=6.3e-35 Score=273.71 Aligned_cols=273 Identities=23% Similarity=0.354 Sum_probs=221.3
Q ss_pred eeeEEEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCC-----------CCCCCcccccceeEEEEEe
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFP-----------LPLFPRVLGHEGVGMVESI 82 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~-----------~~~~p~v~G~e~~G~Vv~v 82 (332)
|||+++.++ .+++++.+.|+++++||+||+.++++|++|+. ..+... ...+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 689999876 59999999999999999999999999999998 665221 2335788999999999999
Q ss_pred CCCCCC-CCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCc
Q 043260 83 GDEVKE-LKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANY 161 (332)
Q Consensus 83 G~~v~~-~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~ 161 (332)
|++++. +++||+|+..+..+|+.|.+|..| +... ..|+|+||+.++.+.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~--------------~~~~----------------~~g~~~~~~~v~~~~ 128 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIG--------------LSPE----------------APGGYAEYMLLSEAL 128 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCC--------------CCcC----------------CCCceeeeEEechHH
Confidence 999987 999999999999999999999322 1110 124699999999999
Q ss_pred eEEcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcC
Q 043260 162 VVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFG 241 (332)
Q Consensus 162 v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lg 241 (332)
++++|+++++++++ ++.++.+||+++ ..+++++|++|||+|+|++|.+++|+++.+|++.++++++++++.+.++++|
T Consensus 129 ~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g 206 (341)
T cd08262 129 LLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMG 206 (341)
T ss_pred eEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcC
Confidence 99999999999887 556888999985 7889999999999988999999999999999966888888999999999999
Q ss_pred CCeeeCCCCCCCc-hHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHh-HhcCcE
Q 043260 242 MTDFINPDDEPNK-SISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPA-IALGRN 319 (332)
Q Consensus 242 a~~v~~~~~~~~~-~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~~~~~~ 319 (332)
++++++++..... .+. .+.+.+.+.++|++||++|+...+..++++++++ |+++.+|.... ...+.+.. +..+++
T Consensus 207 ~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~ 283 (341)
T cd08262 207 ADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCME-SDNIEPALAIRKELT 283 (341)
T ss_pred CcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCC-CCccCHHHHhhcceE
Confidence 9999987651100 222 3445556668999999999855788999999998 99999997753 22233332 233777
Q ss_pred EEEee
Q 043260 320 LKGTI 324 (332)
Q Consensus 320 i~g~~ 324 (332)
+.++.
T Consensus 284 ~~~~~ 288 (341)
T cd08262 284 LQFSL 288 (341)
T ss_pred EEEEe
Confidence 77654
No 78
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=7.8e-35 Score=273.25 Aligned_cols=276 Identities=30% Similarity=0.406 Sum_probs=231.4
Q ss_pred ecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCC---CCCCCCcccccceeEEEEEeCCCCCCCCCCCEEE
Q 043260 21 WGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGF---PLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVI 96 (332)
Q Consensus 21 ~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~---~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdrV~ 96 (332)
+++++++++++.|.|.|.++||+||+.++++|++|+. +.+.. ....+|.++|||++|+|+++|++++.+++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 4677779999999999999999999999999999988 54431 1234577899999999999999999999999999
Q ss_pred eecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhhhhh
Q 043260 97 PTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGF 176 (332)
Q Consensus 97 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~aa~ 176 (332)
..++..|+.|.+|..+.++.|.+..++ |+...| +|++|+.++.+.++++|+++++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------------~~~~~~~~~~~~~~~lp~~~~~~~a~- 143 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKIF--GVDTDG------------------CFAEYAVVPAQNIWKNPKSIPPEYAT- 143 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcceE--eecCCC------------------cceeEEEeehHHcEECcCCCChHhhh-
Confidence 999999999999999999999997544 443333 59999999999999999999986554
Q ss_pred cccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchH
Q 043260 177 LSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSI 256 (332)
Q Consensus 177 l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~ 256 (332)
++.++.+|++++ .....+|++++|.|+|++|++++|+++.+|.+.|+++++++++.+.++++|++.+++... .++
T Consensus 144 ~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~ 218 (340)
T TIGR00692 144 IQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK---EDV 218 (340)
T ss_pred hcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc---cCH
Confidence 566888998876 345789999999888999999999999999844888888888999999999999998876 778
Q ss_pred HHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChH-hHhc-CcEEEEee
Q 043260 257 SELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFP-AIAL-GRNLKGTI 324 (332)
Q Consensus 257 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~-~~~~-~~~i~g~~ 324 (332)
.+.+.++++++++|++||++++...+...+++++++ |+++.+|.... ..++++. .+++ ++++.+..
T Consensus 219 ~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 286 (340)
T TIGR00692 219 VKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPG-KVTIDFTNKVIFKGLTIYGIT 286 (340)
T ss_pred HHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCC-CcccchhhhhhhcceEEEEEe
Confidence 888888888779999999999877889999999998 99999997643 2333333 3444 77777654
No 79
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=1.2e-34 Score=271.62 Aligned_cols=280 Identities=29% Similarity=0.438 Sum_probs=226.4
Q ss_pred EEecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-cc-CCCCC--CCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 043260 19 VCWGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SS-KGFPL--PLFPRVLGHEGVGMVESIGDEVKELKEGDI 94 (332)
Q Consensus 19 ~~~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~-g~~~~--~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdr 94 (332)
++++.+. +++++.+.|+++++||+||+.++++|++|+. +. +..+. ..+|.++|||++|+|+++|++++.|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 5677765 9999999999999999999999999999987 53 32211 245778999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhhh
Q 043260 95 VIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLA 174 (332)
Q Consensus 95 V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~a 174 (332)
|+..+..+|+.|.+|..|+.+.|++..+. +... +. ....|+|++|+.++.+.++++|+++++++|
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~-~~------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~~a 145 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRFL--GSAM-RF------------PHVQGGFREYLVVDASQCVPLPDGLSLRRA 145 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccce--eecc-cc------------CCCCCceeeEEEechHHeEECcCCCCHHHh
Confidence 99999999999999999999999986543 2110 00 001246999999999999999999999998
Q ss_pred hhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCc
Q 043260 175 GFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNK 254 (332)
Q Consensus 175 a~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~ 254 (332)
+. ..++.+||+++.+...+ ++++|||.|+|.+|++++|+++.+|..+|+++++++++.++++++|+++++++++ .
T Consensus 146 a~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~---~ 220 (339)
T cd08232 146 AL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR---D 220 (339)
T ss_pred hh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc---h
Confidence 76 46888999988655555 9999999888999999999999999867999999999999999999999998765 3
Q ss_pred hHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEee
Q 043260 255 SISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTI 324 (332)
Q Consensus 255 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~ 324 (332)
++.+ + .....++|++||+.+....+...+++|+++ |+++.+|... ....+++..++. ++++.++.
T Consensus 221 ~~~~-~--~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~ 286 (339)
T cd08232 221 PLAA-Y--AADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG-GPVPLPLNALVAKELDLRGSF 286 (339)
T ss_pred hhhh-h--hccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC-CCccCcHHHHhhcceEEEEEe
Confidence 3221 1 122346999999999766889999999998 9999998655 334455554444 77877764
No 80
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.6e-34 Score=270.29 Aligned_cols=274 Identities=23% Similarity=0.336 Sum_probs=221.8
Q ss_pred eeeEEEecCCCC--eEEEE-EecCCCCCCeEEEEEeeeecCccccc-ccCCCC--------------------CCCCCcc
Q 043260 15 AAAVVCWGEGEP--WKVEE-IQVEPPKATEVRFKMLYASICHTDVL-SSKGFP--------------------LPLFPRV 70 (332)
Q Consensus 15 ~~a~~~~~~~~~--l~~~~-~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~--------------------~~~~p~v 70 (332)
||++++++++.+ +.+.+ .+.|.+.+++|+|||.++++|++|+. ..|.++ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 688888876542 55543 47777899999999999999999998 766432 2457889
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCC
Q 043260 71 LGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCST 150 (332)
Q Consensus 71 ~G~e~~G~Vv~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~ 150 (332)
+|||++|+|+++|+++++|++||+|+..+..+|+.|..| ...... |...+ |+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~--------~~~~~~--~~~~~------------------g~ 132 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDP--------ADIDYI--GSERD------------------GG 132 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccc--------cccccc--CCCCC------------------cc
Confidence 999999999999999999999999999888888877653 111111 22222 35
Q ss_pred ceeeEEecCCceEEcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 043260 151 MTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDK 229 (332)
Q Consensus 151 ~a~~~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~ 229 (332)
|++|+.++.+.++++|+++++.+++.+.+++.|||+++ ...++++|++|||+|+ |++|++++++++.+|+ +|++++.
T Consensus 133 ~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~~ 210 (350)
T cd08274 133 FAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVAG 210 (350)
T ss_pred ceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeC
Confidence 99999999999999999999999999999999999987 7788999999999998 9999999999999999 7888876
Q ss_pred CcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccC
Q 043260 230 NPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPL 309 (332)
Q Consensus 230 ~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~ 309 (332)
++ +++.++++|++.+++... ....+ .+.+.+.++|++||++|+ ..+..++++++++ |+++.+|.......++
T Consensus 211 ~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 282 (350)
T cd08274 211 AA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIAGPVVEL 282 (350)
T ss_pred ch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccCCccccC
Confidence 65 788889999986665543 33333 456667789999999998 5889999999998 9999999764333677
Q ss_pred ChHhHhc-CcEEEEeecc
Q 043260 310 NFPAIAL-GRNLKGTIFG 326 (332)
Q Consensus 310 ~~~~~~~-~~~i~g~~~~ 326 (332)
+...++. ++++.++...
T Consensus 283 ~~~~~~~~~~~~~~~~~~ 300 (350)
T cd08274 283 DLRTLYLKDLTLFGSTLG 300 (350)
T ss_pred CHHHhhhcceEEEEeecC
Confidence 7777555 8899887764
No 81
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=3.9e-34 Score=268.80 Aligned_cols=221 Identities=19% Similarity=0.228 Sum_probs=188.8
Q ss_pred eEEEEEecCCCC-CCeEEEEEeeeecCccccc-cc---CCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEeeccc
Q 043260 27 WKVEEIQVEPPK-ATEVRFKMLYASICHTDVL-SS---KGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIG 101 (332)
Q Consensus 27 l~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~-~~---g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdrV~~~~~~ 101 (332)
+++++.+.|+|. ++||||||+++|||+.|.. .. +......+|.++|||++|+|+++|+++++|++||||+...
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-- 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence 888999999874 9999999999999999864 32 2111235678999999999999999999999999998310
Q ss_pred CCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhh----hhhc
Q 043260 102 ECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSL----AGFL 177 (332)
Q Consensus 102 ~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~----aa~l 177 (332)
++|+||+.++++.++++|+++++.+ ++++
T Consensus 101 -----------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~ 133 (345)
T cd08293 101 -----------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAV 133 (345)
T ss_pred -----------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhhhc
Confidence 2499999999999999999864432 4456
Q ss_pred ccchhhhHHHHHHhhCCCCC--CEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH-cCCCeeeCCCCCCC
Q 043260 178 SCGYSSGFGAAWKEFKVEKG--SSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA-FGMTDFINPDDEPN 253 (332)
Q Consensus 178 ~~~~~ta~~al~~~~~~~~g--~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~ 253 (332)
+.++.|||+++.+..++++| ++|||+|+ |++|++++|+|+.+|+++|+++++++++++.+++ +|+++++++.+
T Consensus 134 ~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~--- 210 (345)
T cd08293 134 GLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT--- 210 (345)
T ss_pred CcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC---
Confidence 67899999998777788877 99999998 9999999999999998679999999999998876 99999999887
Q ss_pred chHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCC
Q 043260 254 KSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAA 302 (332)
Q Consensus 254 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 302 (332)
.++.+.++++++ .++|+|||++|+. .+..++++++++ |+++.+|..
T Consensus 211 ~~~~~~i~~~~~-~gvd~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~ 256 (345)
T cd08293 211 DNVAERLRELCP-EGVDVYFDNVGGE-ISDTVISQMNEN-SHIILCGQI 256 (345)
T ss_pred CCHHHHHHHHCC-CCceEEEECCCcH-HHHHHHHHhccC-CEEEEEeee
Confidence 778888888876 5899999999985 679999999998 999999954
No 82
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=5e-34 Score=267.49 Aligned_cols=263 Identities=29% Similarity=0.387 Sum_probs=220.5
Q ss_pred eeeEEEecCCCC---eEEEEEecCCCCC-CeEEEEEeeeecCccccc-ccCCCCC-CC----CCcccccceeEEEEEeCC
Q 043260 15 AAAVVCWGEGEP---WKVEEIQVEPPKA-TEVRFKMLYASICHTDVL-SSKGFPL-PL----FPRVLGHEGVGMVESIGD 84 (332)
Q Consensus 15 ~~a~~~~~~~~~---l~~~~~~~p~~~~-~eVlVkv~~~~i~~~D~~-~~g~~~~-~~----~p~v~G~e~~G~Vv~vG~ 84 (332)
|||+++++.+.+ +.+++.|.|+|.+ +||+||+.++++|++|+. +.+..+. .. .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 799999988764 8999999999887 999999999999999998 7776542 12 677999999999999999
Q ss_pred CCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEE
Q 043260 85 EVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVK 164 (332)
Q Consensus 85 ~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~ 164 (332)
+++.+++||+|+.... ..|+|++|+.++.+.+++
T Consensus 81 ~v~~~~~Gd~V~~~~~----------------------------------------------~~g~~~~~~~v~~~~~~~ 114 (341)
T cd08290 81 GVKSLKPGDWVIPLRP----------------------------------------------GLGTWRTHAVVPADDLIK 114 (341)
T ss_pred CCCCCCCCCEEEecCC----------------------------------------------CCccchheEeccHHHeEe
Confidence 9999999999984311 124699999999999999
Q ss_pred cCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCc----chHHHHHH
Q 043260 165 VDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNP----CRKDKGEA 239 (332)
Q Consensus 165 lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~----~~~~~~~~ 239 (332)
+|+++++++++.+++++.|||+++.....+++|++|||+|+ |++|++++++|+..|. +++++..++ ++++.+++
T Consensus 115 lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~ 193 (341)
T cd08290 115 VPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLKA 193 (341)
T ss_pred CCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHHh
Confidence 99999999999999999999999877778999999999987 9999999999999998 788877665 66788889
Q ss_pred cCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-Cc
Q 043260 240 FGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GR 318 (332)
Q Consensus 240 lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~ 318 (332)
+|++++++++.....++.+.+.++.++ ++|+|||++|+. .+...+++++++ |+++.+|........++...++. ++
T Consensus 194 ~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 270 (341)
T cd08290 194 LGADHVLTEEELRSLLATELLKSAPGG-RPKLALNCVGGK-SATELARLLSPG-GTMVTYGGMSGQPVTVPTSLLIFKDI 270 (341)
T ss_pred cCCCEEEeCcccccccHHHHHHHHcCC-CceEEEECcCcH-hHHHHHHHhCCC-CEEEEEeccCCCCcccCHHHHhhCCc
Confidence 999999987651011677778887777 899999999985 677899999998 99999986543334566644444 89
Q ss_pred EEEEeeccc
Q 043260 319 NLKGTIFGG 327 (332)
Q Consensus 319 ~i~g~~~~~ 327 (332)
++.++....
T Consensus 271 ~~~~~~~~~ 279 (341)
T cd08290 271 TLRGFWLTR 279 (341)
T ss_pred eEEEEecHH
Confidence 999987654
No 83
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=7.6e-34 Score=256.37 Aligned_cols=259 Identities=27% Similarity=0.447 Sum_probs=219.3
Q ss_pred eEEEEEeeeecCccccc-ccCCCC-CCCCCcccccceeEEEEEeCCCCCCCCCCCEEEeecccCCCCCcccccCCcccCC
Q 043260 41 EVRFKMLYASICHTDVL-SSKGFP-LPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCL 118 (332)
Q Consensus 41 eVlVkv~~~~i~~~D~~-~~g~~~-~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~ 118 (332)
||+|||.++++|+.|+. +.+..+ ...+|.++|||++|+|+++|++++.|++||+|+..+..+|+.|.+|+. .|.
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 68999999999999999 777654 345688999999999999999999999999999999999999999997 676
Q ss_pred CCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCC
Q 043260 119 KYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGS 198 (332)
Q Consensus 119 ~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~ 198 (332)
+.... +....| +|++|+.++.+.++++|+++++++++.+++++.+||+++.+...+++++
T Consensus 77 ~~~~~--~~~~~g------------------~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~ 136 (271)
T cd05188 77 GGGIL--GEGLDG------------------GFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGD 136 (271)
T ss_pred CCCEe--ccccCC------------------cceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCC
Confidence 66543 443444 5999999999999999999999999999999999999987777779999
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCC
Q 043260 199 SVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGV 278 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~ 278 (332)
+|||+|+|++|++++++++..|. +|+++++++++.+.++++|++.+++..+ .+..+.+. ...+.++|++|++++.
T Consensus 137 ~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~~~~ 211 (271)
T cd05188 137 TVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDAVGG 211 (271)
T ss_pred EEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEECCCC
Confidence 99999995599999999999997 9999999999999999999998888776 55666665 5556689999999998
Q ss_pred hHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhcCcEEEEeeccccc
Q 043260 279 ASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIALGRNLKGTIFGGIK 329 (332)
Q Consensus 279 ~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~ 329 (332)
...+..++++++++ |+++.+|.... .........+.+++++.++..+.+.
T Consensus 212 ~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (271)
T cd05188 212 PETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTRE 262 (271)
T ss_pred HHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCHH
Confidence 55788999999998 99999998765 2222233333349999999887653
No 84
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=7e-34 Score=266.67 Aligned_cols=258 Identities=22% Similarity=0.261 Sum_probs=210.2
Q ss_pred eeeeEEEecCCC-CeEEEEEec----CCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccce--eEEEEEeCC
Q 043260 14 YAAAVVCWGEGE-PWKVEEIQV----EPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEG--VGMVESIGD 84 (332)
Q Consensus 14 ~~~a~~~~~~~~-~l~~~~~~~----p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~--~G~Vv~vG~ 84 (332)
.+|++...++.. .+++.+.+. |+|++|||||||++++||+.|++ +.|..+. ...|.++|++. .|.+..+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~ 86 (338)
T cd08295 7 ILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS 86 (338)
T ss_pred EEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence 456666544432 489999887 88999999999999999999999 7764332 35678899865 455556788
Q ss_pred CCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecC-CceE
Q 043260 85 EVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDA-NYVV 163 (332)
Q Consensus 85 ~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~-~~v~ 163 (332)
++++|++||+|+.. |+|+||+.++. ..++
T Consensus 87 ~v~~~~vGd~V~~~--------------------------------------------------g~~aey~~v~~~~~~~ 116 (338)
T cd08295 87 GNPDFKVGDLVWGF--------------------------------------------------TGWEEYSLIPRGQDLR 116 (338)
T ss_pred CCCCCCCCCEEEec--------------------------------------------------CCceeEEEecchhcee
Confidence 89899999999821 24999999999 7999
Q ss_pred EcC-CCCChh-hhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH-
Q 043260 164 KVD-PSIDLS-LAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA- 239 (332)
Q Consensus 164 ~lP-~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~- 239 (332)
++| ++++++ +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++++++
T Consensus 117 ~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~ 195 (338)
T cd08295 117 KIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNK 195 (338)
T ss_pred ecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHh
Confidence 995 678886 788899999999999877889999999999998 9999999999999999 89999999999999988
Q ss_pred cCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcc-----cCChHhH
Q 043260 240 FGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKV-----PLNFPAI 314 (332)
Q Consensus 240 lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~-----~~~~~~~ 314 (332)
+|+++++++.+ ..++.+.+++.++ .++|+|||++|+ ..+..++++++++ |+++.+|....... .+++..+
T Consensus 196 lGa~~vi~~~~--~~~~~~~i~~~~~-~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~ 270 (338)
T cd08295 196 LGFDDAFNYKE--EPDLDAALKRYFP-NGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNI 270 (338)
T ss_pred cCCceeEEcCC--cccHHHHHHHhCC-CCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHH
Confidence 99999998654 1467777877776 589999999998 6889999999998 99999997653111 1344444
Q ss_pred hc-CcEEEEeeccc
Q 043260 315 AL-GRNLKGTIFGG 327 (332)
Q Consensus 315 ~~-~~~i~g~~~~~ 327 (332)
+. ++++.|++...
T Consensus 271 ~~~~~~i~g~~~~~ 284 (338)
T cd08295 271 IYKRVKIQGFLVGD 284 (338)
T ss_pred hhccceeeEEEehh
Confidence 44 78888876544
No 85
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-33 Score=265.78 Aligned_cols=260 Identities=20% Similarity=0.258 Sum_probs=209.4
Q ss_pred cceeeeEEEecCC------CCeEEEE---EecCC-CCCCeEEEEEeeeecCccccc-ccCCCCCCCCCccccc--ceeEE
Q 043260 12 IYYAAAVVCWGEG------EPWKVEE---IQVEP-PKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGH--EGVGM 78 (332)
Q Consensus 12 ~~~~~a~~~~~~~------~~l~~~~---~~~p~-~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~--e~~G~ 78 (332)
..++|.|++...- +.+++.+ .+.|. +++|||||||.++++|+.|+. +.+..+....|.++|+ |++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~ 85 (348)
T PLN03154 6 VVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGV 85 (348)
T ss_pred cccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEE
Confidence 3456888884322 1277766 35663 479999999999999999987 5432322346889998 88999
Q ss_pred EEEeCCCCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEec
Q 043260 79 VESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVD 158 (332)
Q Consensus 79 Vv~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~ 158 (332)
|..+|+++++|++||+|+.. |+|+||..++
T Consensus 86 v~~vg~~v~~~~~Gd~V~~~--------------------------------------------------~~~aey~~v~ 115 (348)
T PLN03154 86 SKVVDSDDPNFKPGDLISGI--------------------------------------------------TGWEEYSLIR 115 (348)
T ss_pred EEEEecCCCCCCCCCEEEec--------------------------------------------------CCcEEEEEEe
Confidence 99999999999999999821 3599999998
Q ss_pred CC--ceEE--cCCCCChh-hhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcc
Q 043260 159 AN--YVVK--VDPSIDLS-LAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPC 232 (332)
Q Consensus 159 ~~--~v~~--lP~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~ 232 (332)
.. ++++ +|++++++ ++|.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++
T Consensus 116 ~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~ 194 (348)
T PLN03154 116 SSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQ 194 (348)
T ss_pred ccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHH
Confidence 74 3544 48999986 688899999999999877788999999999998 9999999999999999 8999999999
Q ss_pred hHHHHH-HcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcc----
Q 043260 233 RKDKGE-AFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKV---- 307 (332)
Q Consensus 233 ~~~~~~-~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~---- 307 (332)
++++++ ++|++.++++++ ..++.+.+++.+++ ++|++||++|+ ..+..++++++++ |+++.+|.......
T Consensus 195 k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~-gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~ 269 (348)
T PLN03154 195 KVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPE-GIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSASQ 269 (348)
T ss_pred HHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCC-CcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCCCC
Confidence 999887 799999998864 13677778777764 89999999998 5889999999998 99999997653221
Q ss_pred -cCChHhHhc-CcEEEEeeccc
Q 043260 308 -PLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 308 -~~~~~~~~~-~~~i~g~~~~~ 327 (332)
.++...++. ++++.|++.+.
T Consensus 270 ~~~~~~~~~~k~~~i~g~~~~~ 291 (348)
T PLN03154 270 GIHNLYNLISKRIRMQGFLQSD 291 (348)
T ss_pred CcccHHHHhhccceEEEEEHHH
Confidence 135555555 89999987654
No 86
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=3.2e-33 Score=260.48 Aligned_cols=252 Identities=24% Similarity=0.251 Sum_probs=207.3
Q ss_pred eeeeEEEecC--CC----CeEEEEEecCCCCCCeEEEEEeeeecCcccccccCCCCCCCCCcccccceeEEEEEeCCCCC
Q 043260 14 YAAAVVCWGE--GE----PWKVEEIQVEPPKATEVRFKMLYASICHTDVLSSKGFPLPLFPRVLGHEGVGMVESIGDEVK 87 (332)
Q Consensus 14 ~~~a~~~~~~--~~----~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~ 87 (332)
+||+|++... +. .+++++.+.|+|++|||||||++++||+.|..+... ...+|.++|+|++|+|++ .++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~~~~p~v~G~e~~G~V~~---~~~ 76 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--LNEGDTMIGTQVAKVIES---KNS 76 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc--CCCCCcEecceEEEEEec---CCC
Confidence 6899999873 22 388999999999999999999999999887652211 124688999999999995 446
Q ss_pred CCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCC---ceEE
Q 043260 88 ELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN---YVVK 164 (332)
Q Consensus 88 ~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~---~v~~ 164 (332)
.|++||||+.. ++|++|+.++.+ .+++
T Consensus 77 ~~~~Gd~V~~~--------------------------------------------------~~~~~~~~~~~~~~~~~~~ 106 (329)
T cd08294 77 KFPVGTIVVAS--------------------------------------------------FGWRTHTVSDGKDQPDLYK 106 (329)
T ss_pred CCCCCCEEEee--------------------------------------------------CCeeeEEEECCccccceEE
Confidence 79999999821 138999999999 9999
Q ss_pred cCCCCC--h---hhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH
Q 043260 165 VDPSID--L---SLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE 238 (332)
Q Consensus 165 lP~~~~--~---~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~ 238 (332)
+|++++ + ..++++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++
T Consensus 107 iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~ 185 (329)
T cd08294 107 LPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLK 185 (329)
T ss_pred CCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 999998 2 2334677899999999888889999999999997 9999999999999999 8999999999999999
Q ss_pred HcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-Cc-----ccCChH
Q 043260 239 AFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AK-----VPLNFP 312 (332)
Q Consensus 239 ~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~-----~~~~~~ 312 (332)
++|+++++++.+ .++.+.++++++ .++|+|||++|+ ..+..++++++++ |+++.+|.... .. ......
T Consensus 186 ~~Ga~~vi~~~~---~~~~~~v~~~~~-~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~ 259 (329)
T cd08294 186 ELGFDAVFNYKT---VSLEEALKEAAP-DGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQE 259 (329)
T ss_pred HcCCCEEEeCCC---ccHHHHHHHHCC-CCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHH
Confidence 999999999887 778888888776 589999999998 6889999999998 99999986432 11 122233
Q ss_pred hHhc-CcEEEEeeccc
Q 043260 313 AIAL-GRNLKGTIFGG 327 (332)
Q Consensus 313 ~~~~-~~~i~g~~~~~ 327 (332)
.++. ++++.++....
T Consensus 260 ~~~~~~~~l~~~~~~~ 275 (329)
T cd08294 260 TIIFKQLKMEGFIVYR 275 (329)
T ss_pred HHhhhcceEEEEEhhh
Confidence 3444 88888876554
No 87
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=5.2e-33 Score=259.14 Aligned_cols=261 Identities=26% Similarity=0.344 Sum_probs=222.0
Q ss_pred eeeeEEEecCCC--CeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 043260 14 YAAAVVCWGEGE--PWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKEL 89 (332)
Q Consensus 14 ~~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~ 89 (332)
||||+++.+.+. .+.+.+.+.|++.++||+|||.++++|+.|.. ..+..+. ...|.++|||++|+|+++|++++.+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 699999998775 36677778888899999999999999999988 7665432 3456789999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCC
Q 043260 90 KEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSI 169 (332)
Q Consensus 90 ~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~ 169 (332)
++||+|+. +..+ |+|++|+.++.++++++|+++
T Consensus 81 ~~Gd~V~~-----------------------------~~~~------------------g~~~~~~~v~~~~~~~ip~~~ 113 (334)
T PTZ00354 81 KEGDRVMA-----------------------------LLPG------------------GGYAEYAVAHKGHVMHIPQGY 113 (334)
T ss_pred CCCCEEEE-----------------------------ecCC------------------CceeeEEEecHHHcEeCCCCC
Confidence 99999982 2222 359999999999999999999
Q ss_pred ChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCC
Q 043260 170 DLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINP 248 (332)
Q Consensus 170 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 248 (332)
++++++.++.++.+||+++.+...+++|++|+|+|+ |++|++++++++..|+ +++++.+++++++.++++|++.+++.
T Consensus 114 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 192 (334)
T PTZ00354 114 TFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIRY 192 (334)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 999999999999999999877788999999999997 9999999999999999 77788889999999999999988887
Q ss_pred CCCCCch-HHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCccc-CChHhHhc-CcEEEEeec
Q 043260 249 DDEPNKS-ISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVP-LNFPAIAL-GRNLKGTIF 325 (332)
Q Consensus 249 ~~~~~~~-~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~-~~~~~~~~-~~~i~g~~~ 325 (332)
.. .+ +.+.+.++++++++|++||++++ ..+..++++++++ |+++.+|........ +++..++. +.++.++..
T Consensus 193 ~~---~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (334)
T PTZ00354 193 PD---EEGFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTL 267 (334)
T ss_pred CC---hhHHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCCCCcccccCHHHHHhhCCEEEeeec
Confidence 65 44 77788888877799999999987 5889999999998 999999976543333 77766665 668888776
Q ss_pred cc
Q 043260 326 GG 327 (332)
Q Consensus 326 ~~ 327 (332)
..
T Consensus 268 ~~ 269 (334)
T PTZ00354 268 RS 269 (334)
T ss_pred cc
Confidence 54
No 88
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=2.4e-33 Score=262.29 Aligned_cols=254 Identities=19% Similarity=0.240 Sum_probs=210.5
Q ss_pred eeEEEecC---CC--CeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 043260 16 AAVVCWGE---GE--PWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKEL 89 (332)
Q Consensus 16 ~a~~~~~~---~~--~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~ 89 (332)
||+++..+ ++ .+++.++|.|+|+++||+|||+++++|++|.. +.+..+...+|.++|||++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57888875 33 38888899999999999999999999999998 76765545678899999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCC
Q 043260 90 KEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSI 169 (332)
Q Consensus 90 ~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~ 169 (332)
++||+|+... +... .|+|++|+.++.+.++++|+++
T Consensus 81 ~~Gd~V~~~~--------------------------~~~~------------------~g~~~~~~~v~~~~~~~ip~~~ 116 (336)
T TIGR02817 81 KPGDEVWYAG--------------------------DIDR------------------PGSNAEFHLVDERIVGHKPKSL 116 (336)
T ss_pred CCCCEEEEcC--------------------------CCCC------------------CCcccceEEEcHHHcccCCCCC
Confidence 9999998321 0011 2469999999999999999999
Q ss_pred ChhhhhhcccchhhhHHHHHHhhCCCC-----CCEEEEECC-ChHHHHHHHHHHHc-CCCeEEEEcCCcchHHHHHHcCC
Q 043260 170 DLSLAGFLSCGYSSGFGAAWKEFKVEK-----GSSVAVFGL-GAVGLGVMDRARIQ-GAAKIIGIDKNPCRKDKGEAFGM 242 (332)
Q Consensus 170 ~~~~aa~l~~~~~ta~~al~~~~~~~~-----g~~vlV~G~-g~vG~~~~~la~~~-G~~~Vi~~~~~~~~~~~~~~lga 242 (332)
++++++.+++++.|||+++....++++ |++|||+|+ |++|++++|+|+.+ |+ +|++++.++++.+.++++|+
T Consensus 117 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~ 195 (336)
T TIGR02817 117 SFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGA 195 (336)
T ss_pred CHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCC
Confidence 999999999999999999877788877 999999997 99999999999998 98 89999999999999999999
Q ss_pred CeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEE
Q 043260 243 TDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLK 321 (332)
Q Consensus 243 ~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~ 321 (332)
++++++. .++.+.+.+. .+.++|+|+|++++...+...+++++++ |+++.++.. ..++...+.. ++++.
T Consensus 196 ~~~~~~~----~~~~~~i~~~-~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~----~~~~~~~~~~~~~~~~ 265 (336)
T TIGR02817 196 HHVIDHS----KPLKAQLEKL-GLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP----AELDISPFKRKSISLH 265 (336)
T ss_pred CEEEECC----CCHHHHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc----ccccchhhhhcceEEE
Confidence 9998754 3466667664 4458999999987767889999999998 999988533 2344444443 46666
Q ss_pred Eee
Q 043260 322 GTI 324 (332)
Q Consensus 322 g~~ 324 (332)
+..
T Consensus 266 ~~~ 268 (336)
T TIGR02817 266 WEF 268 (336)
T ss_pred EEE
Confidence 543
No 89
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.4e-32 Score=256.33 Aligned_cols=281 Identities=25% Similarity=0.346 Sum_probs=230.7
Q ss_pred eeeEEEecCC--CCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEG--EPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~--~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
|||++++..+ +.+++++.+.|.+.++|++||+.++++|++|+. ..+.++. ...|.++|||++|+|+++|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 7899998654 348888888888899999999999999999998 7665543 34688999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||+|+......|+.+. ...|....+. |...+ |+|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~~~~~~~~~------~~~~~~~~~~--~~~~~------------------g~~~~~~~~~~~~~~~lp~~~~ 134 (336)
T cd08276 81 VGDRVVPTFFPNWLDGP------PTAEDEASAL--GGPID------------------GVLAEYVVLPEEGLVRAPDHLS 134 (336)
T ss_pred CCCEEEEeccccccccc------cccccccccc--ccccC------------------ceeeeEEEecHHHeEECCCCCC
Confidence 99999987766654433 3333221111 22222 4599999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD 250 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 250 (332)
+.+++.+.+++.+||+++.+...+++|++|+|+|+|++|++++++++..|+ +|++++.++++++.++++|++.+++.+.
T Consensus 135 ~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~ 213 (336)
T cd08276 135 FEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT 213 (336)
T ss_pred HHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc
Confidence 999999999999999998777889999999999889999999999999999 8999999999999998899999887653
Q ss_pred CCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeecc
Q 043260 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFG 326 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~ 326 (332)
..++.+.+.+.++++++|++||+++. ..+..++++++++ |+++.+|........++...++. ++++.++..+
T Consensus 214 --~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (336)
T cd08276 214 --TPDWGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVG 286 (336)
T ss_pred --ccCHHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecC
Confidence 14567778888887899999999986 5788999999998 99999997664323455555555 8999988754
No 90
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=7.9e-33 Score=258.11 Aligned_cols=239 Identities=22% Similarity=0.276 Sum_probs=196.9
Q ss_pred eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEeecccCCCC
Q 043260 27 WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRE 105 (332)
Q Consensus 27 l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdrV~~~~~~~c~~ 105 (332)
+++.+.+.|+|++|||||||.++++|+.|+. .. +....|.++|+|++|+|+++|+ +|++||||+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~g~~---~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRVAAK---RLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhcccC---cCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence 8889999999999999999999999997765 32 2233478999999999999874 59999999821
Q ss_pred CcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEc----CCCCChhhh-hhcccc
Q 043260 106 CENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKV----DPSIDLSLA-GFLSCG 180 (332)
Q Consensus 106 c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~l----P~~~~~~~a-a~l~~~ 180 (332)
++|++|+.++.+.+.++ |++++++++ ++++++
T Consensus 86 -------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~ 122 (325)
T TIGR02825 86 -------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMP 122 (325)
T ss_pred -------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccH
Confidence 13999999999888888 899999987 678889
Q ss_pred hhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHH
Q 043260 181 YSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISEL 259 (332)
Q Consensus 181 ~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 259 (332)
+.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++++ .+.+.+.
T Consensus 123 ~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~~~~~ 199 (325)
T TIGR02825 123 GLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKSLEET 199 (325)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--cccHHHH
Confidence 9999999888899999999999997 9999999999999999 8999999999999999999999998875 1245555
Q ss_pred HHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-C---ccc--CChHhHhc-CcEEEEeeccc
Q 043260 260 VKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-A---KVP--LNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 260 ~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~---~~~--~~~~~~~~-~~~i~g~~~~~ 327 (332)
+.+.++ .++|+|||++|+. .+..++++++++ |+++.+|.... . ..+ .....+.+ ++++.++....
T Consensus 200 ~~~~~~-~gvdvv~d~~G~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 271 (325)
T TIGR02825 200 LKKASP-DGYDCYFDNVGGE-FSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNR 271 (325)
T ss_pred HHHhCC-CCeEEEEECCCHH-HHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehh
Confidence 555554 4899999999984 779999999998 99999997542 1 111 12333444 88888876543
No 91
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=8.4e-33 Score=257.75 Aligned_cols=239 Identities=23% Similarity=0.304 Sum_probs=212.2
Q ss_pred eeeeEEEecCCCC--eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 043260 14 YAAAVVCWGEGEP--WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 14 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
+||++++.+++.+ +++++++.|+++++||+||+.++++|++|+. ..+.++...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 5899999877653 8889999999999999999999999999999 777665555788999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||+|+... . ..|+|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~----------------------------~------------------~~g~~~~~v~v~~~~~~~lp~~~~ 114 (327)
T PRK10754 81 VGDRVVYAQ----------------------------S------------------ALGAYSSVHNVPADKAAILPDAIS 114 (327)
T ss_pred CCCEEEECC----------------------------C------------------CCcceeeEEEcCHHHceeCCCCCC
Confidence 999997210 0 124599999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 249 (332)
+++++.++..+.+||.++.+...+++|++|+|+|+ |.+|++++++++.+|+ +|+.++.++++++.++++|++.+++.+
T Consensus 115 ~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 193 (327)
T PRK10754 115 FEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYR 193 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCC
Confidence 99999988899999998877788999999999976 9999999999999999 899999999999999999999999887
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
. .++.+.+++.++++++|++||++++ ..+...+++++++ |+++.+|....
T Consensus 194 ~---~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~ 243 (327)
T PRK10754 194 E---ENIVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNASG 243 (327)
T ss_pred C---CcHHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCCC
Confidence 6 7788888888888899999999998 5788999999998 99999997653
No 92
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=1.8e-32 Score=254.76 Aligned_cols=262 Identities=19% Similarity=0.233 Sum_probs=213.4
Q ss_pred eeeEEEecCCC--CeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEGE--PWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
|||++++++++ +++++++|.|.++++||+||+.++++|++|+. +.|..+. ..+|.++|||++|+|+++ +++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 79999998885 69999999999999999999999999999998 7776532 346789999999999999 456899
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||+|+..+.. .|+..+ |+|++|+.++.+.++++|++++
T Consensus 79 ~Gd~V~~~~~~-----------------------~g~~~~------------------g~~~~~~~v~~~~~~~lp~~~~ 117 (325)
T cd05280 79 EGDEVLVTGYD-----------------------LGMNTD------------------GGFAEYVRVPADWVVPLPEGLS 117 (325)
T ss_pred CCCEEEEcccc-----------------------cCCCCC------------------ceeEEEEEEchhhEEECCCCCC
Confidence 99999853210 033223 3599999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCC--C-CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeee
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKV--E-KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFI 246 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~--~-~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~ 246 (332)
+++++.+++.+.+||.++....+. . .+++|+|+|+ |.+|++++++|+.+|+ +|+++++++++++.++++|++.++
T Consensus 118 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 196 (325)
T cd05280 118 LREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVL 196 (325)
T ss_pred HHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEE
Confidence 999999999999999987554333 5 3579999998 9999999999999999 799999999999999999999998
Q ss_pred CCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHh-cCcEEEEeec
Q 043260 247 NPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIA-LGRNLKGTIF 325 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~i~g~~~ 325 (332)
+... . ...+.+...+.++|+|||++++ ..+..++++++++ |+++.+|........+++..++ +++++.++..
T Consensus 197 ~~~~---~--~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd05280 197 DRED---L--LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCGNAAGPELTTTVLPFILRGVSLLGIDS 269 (325)
T ss_pred cchh---H--HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEecCCCCccccccchheeeeeEEEEEEe
Confidence 7654 2 2223344444579999999998 5889999999998 9999999875422356666654 4889888765
Q ss_pred cc
Q 043260 326 GG 327 (332)
Q Consensus 326 ~~ 327 (332)
..
T Consensus 270 ~~ 271 (325)
T cd05280 270 VN 271 (325)
T ss_pred ec
Confidence 43
No 93
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=2.2e-32 Score=253.98 Aligned_cols=261 Identities=22% Similarity=0.238 Sum_probs=219.6
Q ss_pred eeeEEEecCCCC--eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 043260 15 AAAVVCWGEGEP--WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFP---LPLFPRVLGHEGVGMVESIGDEVKE 88 (332)
Q Consensus 15 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~---~~~~p~v~G~e~~G~Vv~vG~~v~~ 88 (332)
|||+++++++.+ +++.+.+.|.+.++||+||+.++++|++|+. ..|..+ ....|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 689999876543 6677777777889999999999999999998 766543 2456788999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCC
Q 043260 89 LKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPS 168 (332)
Q Consensus 89 ~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~ 168 (332)
+++||+|+.... .. .|+|++|+.++.+.++++|++
T Consensus 81 ~~~Gd~V~~~~~---------------------------~~------------------~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08244 81 AWLGRRVVAHTG---------------------------RA------------------GGGYAELAVADVDSLHPVPDG 115 (324)
T ss_pred CCCCCEEEEccC---------------------------CC------------------CceeeEEEEEchHHeEeCCCC
Confidence 999999984321 01 246999999999999999999
Q ss_pred CChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeC
Q 043260 169 IDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFIN 247 (332)
Q Consensus 169 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~ 247 (332)
+++++++.+++++.||| ++.+..+++++++|+|+|+ |.+|++++++|+..|+ +|+++++++++.+.++++|++.+++
T Consensus 116 ~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 193 (324)
T cd08244 116 LDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVD 193 (324)
T ss_pred CCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 99999999999999996 4557788999999999996 9999999999999999 8999999999999999999999888
Q ss_pred CCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeecc
Q 043260 248 PDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFG 326 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~ 326 (332)
..+ .++.+.+.++++++++|+++|++|+. ....++++++++ |+++.+|.......+++...++. ++++.++...
T Consensus 194 ~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (324)
T cd08244 194 YTR---PDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG-GRFLTYGWASGEWTALDEDDARRRGVTVVGLLGV 268 (324)
T ss_pred cCC---ccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccC-cEEEEEecCCCCCCccCHHHHhhCCcEEEEeecc
Confidence 776 67778888888878999999999985 668999999998 99999998765334666544444 8888887654
Q ss_pred c
Q 043260 327 G 327 (332)
Q Consensus 327 ~ 327 (332)
.
T Consensus 269 ~ 269 (324)
T cd08244 269 Q 269 (324)
T ss_pred c
Confidence 3
No 94
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=5.3e-32 Score=251.98 Aligned_cols=260 Identities=21% Similarity=0.214 Sum_probs=209.9
Q ss_pred eeeEEEecCCCC--eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCC-CCCCCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEGEP--WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKG-FPLPLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~-~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
|||+++.+++++ +++++++.|.+.++||+||+.++++|++|.. ..+. .....+|.++|||++|+|++.| +++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 789999988763 7889999999999999999999999999987 5432 1123468899999999999954 57799
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||+|+..+.. .|...+ |+|+||+.++.+.++++|++++
T Consensus 79 ~Gd~V~~~~~~-----------------------~~~~~~------------------g~~~~~~~v~~~~~~~~p~~~~ 117 (326)
T cd08289 79 PGDEVIVTSYD-----------------------LGVSHH------------------GGYSEYARVPAEWVVPLPKGLT 117 (326)
T ss_pred CCCEEEEcccc-----------------------cCCCCC------------------CcceeEEEEcHHHeEECCCCCC
Confidence 99999854210 022222 4599999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhh--C-CCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeee
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEF--K-VEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFI 246 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~--~-~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~ 246 (332)
+++++.+++++.||+.++.... . ...+++|||+|+ |.+|++++++|+.+|+ +|+++++++++++.++++|++.++
T Consensus 118 ~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~ 196 (326)
T cd08289 118 LKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVI 196 (326)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEE
Confidence 9999999999999998775432 2 345789999998 9999999999999999 899999999999999999999998
Q ss_pred CCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeec
Q 043260 247 NPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIF 325 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~ 325 (332)
+.++ . ..+.+.++. +.++|+|||++|+ ..+..++++++++ |+++.+|.......++++..++. ++++.++..
T Consensus 197 ~~~~---~-~~~~~~~~~-~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (326)
T cd08289 197 PREE---L-QEESIKPLE-KQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTGGGEVETTVFPFILRGVNLLGIDS 269 (326)
T ss_pred cchh---H-HHHHHHhhc-cCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecCCCCCCcchhhhhhccceEEEEEe
Confidence 8764 3 244555554 4589999999998 5889999999998 99999998754334445555644 889988753
No 95
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.3e-31 Score=249.85 Aligned_cols=256 Identities=22% Similarity=0.261 Sum_probs=215.5
Q ss_pred eeeeEEEecCCC----CeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCC
Q 043260 14 YAAAVVCWGEGE----PWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVK 87 (332)
Q Consensus 14 ~~~a~~~~~~~~----~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~ 87 (332)
.|||+++.+++. ++++++.+.|.+.++|++|||.++++|++|+. ..+.++. ..+|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 489999987664 58899999999999999999999999999998 7765542 46788999999999999999999
Q ss_pred CCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCC
Q 043260 88 ELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDP 167 (332)
Q Consensus 88 ~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~ 167 (332)
.+++||+|+.. ..|+|++|+.++.+.++++|+
T Consensus 81 ~~~~Gd~V~~~------------------------------------------------~~g~~~s~~~v~~~~~~~ip~ 112 (329)
T cd08250 81 DFKVGDAVATM------------------------------------------------SFGAFAEYQVVPARHAVPVPE 112 (329)
T ss_pred CCCCCCEEEEe------------------------------------------------cCcceeEEEEechHHeEECCC
Confidence 99999999832 124599999999999999999
Q ss_pred CCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeee
Q 043260 168 SIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFI 246 (332)
Q Consensus 168 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~ 246 (332)
+ +.+++.++.++.+||+++.+..++++|++++|+|+ |.+|++++++++..|. +|+++++++++.+.++++|++.++
T Consensus 113 ~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~ 189 (329)
T cd08250 113 L--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPI 189 (329)
T ss_pred C--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEE
Confidence 7 35677788899999999877788999999999997 9999999999999999 899999999999999999999888
Q ss_pred CCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCC----------cccCChHhHhc
Q 043260 247 NPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEA----------KVPLNFPAIAL 316 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~----------~~~~~~~~~~~ 316 (332)
+... .++.+.+.+..+ .++|+|||++|+ ..+..++++++++ |+++.+|..... ...++...+..
T Consensus 190 ~~~~---~~~~~~~~~~~~-~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd08250 190 NYKT---EDLGEVLKKEYP-KGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAK 263 (329)
T ss_pred eCCC---ccHHHHHHHhcC-CCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhc
Confidence 7765 666667766655 589999999997 5889999999998 999999976531 12333333444
Q ss_pred CcEEEEeecc
Q 043260 317 GRNLKGTIFG 326 (332)
Q Consensus 317 ~~~i~g~~~~ 326 (332)
++++.++...
T Consensus 264 ~~~~~~~~~~ 273 (329)
T cd08250 264 SASVRGFFLP 273 (329)
T ss_pred CceEEEEEhH
Confidence 8888887654
No 96
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=5.4e-32 Score=254.06 Aligned_cols=243 Identities=25% Similarity=0.368 Sum_probs=206.8
Q ss_pred eeeEEEecCC-CCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 15 AAAVVCWGEG-EPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 15 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
|||+++++++ ..+++++.+.|+|+++||+||++++++|++|+. ..+.. ....|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 7899999884 348899999999999999999999999999998 64543 12357789999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChh
Q 043260 93 DIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLS 172 (332)
Q Consensus 93 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~ 172 (332)
|+|+......|+ +... .|+|++|+.++.+.++++|++++++
T Consensus 80 d~V~~~~~~~~~---------------------~~~~------------------~g~~~~~~~v~~~~~~~ip~~~~~~ 120 (339)
T cd08249 80 DRVAGFVHGGNP---------------------NDPR------------------NGAFQEYVVADADLTAKIPDNISFE 120 (339)
T ss_pred CEEEEEeccccC---------------------CCCC------------------CCcccceEEechhheEECCCCCCHH
Confidence 999865432111 1111 2469999999999999999999999
Q ss_pred hhhhcccchhhhHHHHHHhhCC----------CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcC
Q 043260 173 LAGFLSCGYSSGFGAAWKEFKV----------EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFG 241 (332)
Q Consensus 173 ~aa~l~~~~~ta~~al~~~~~~----------~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lg 241 (332)
+++.+++++.|||+++.+..++ .++++|+|+|+ |.+|++++++++.+|+ +|+.+. ++++++.++++|
T Consensus 121 ~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g 198 (339)
T cd08249 121 EAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLG 198 (339)
T ss_pred HceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcC
Confidence 9999999999999988665544 78999999998 9999999999999999 888877 568888889999
Q ss_pred CCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhcc--CCcEEEEEcCCCC
Q 043260 242 MTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKL--GKGKVMAIGAANE 304 (332)
Q Consensus 242 a~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~--~~G~~v~~G~~~~ 304 (332)
++++++... .++.+.++++++ .++|+|||++|++..+..+++++++ + |+++.+|....
T Consensus 199 ~~~v~~~~~---~~~~~~l~~~~~-~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~ 258 (339)
T cd08249 199 ADAVFDYHD---PDVVEDIRAATG-GKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPE 258 (339)
T ss_pred CCEEEECCC---chHHHHHHHhcC-CCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCc
Confidence 999998876 778888888776 4899999999986688999999999 8 99999997653
No 97
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=3.3e-31 Score=246.50 Aligned_cols=259 Identities=23% Similarity=0.242 Sum_probs=209.5
Q ss_pred eeEEEecCCC--CeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 043260 16 AAVVCWGEGE--PWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKELKE 91 (332)
Q Consensus 16 ~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~v 91 (332)
||+++...+. .++++++|.|.+.++||+||++++++|++|+. +.|.++. ..+|.++|||++|+|++ ++++.|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 6788887766 36899999999999999999999999999998 7776532 35688999999999998 56778999
Q ss_pred CCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCCh
Q 043260 92 GDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDL 171 (332)
Q Consensus 92 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~ 171 (332)
||+|+..+... |...+ |+|++|+.++.+.++++|+++++
T Consensus 79 Gd~V~~~~~~~-----------------------~~~~~------------------g~~~~~~~~~~~~~~~iP~~~~~ 117 (323)
T TIGR02823 79 GDEVIVTGYGL-----------------------GVSHD------------------GGYSQYARVPADWLVPLPEGLSL 117 (323)
T ss_pred CCEEEEccCCC-----------------------CCCCC------------------ccceEEEEEchhheEECCCCCCH
Confidence 99998542100 11122 45999999999999999999999
Q ss_pred hhhhhcccchhhhHHHHHHh--hCCCCCC-EEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeC
Q 043260 172 SLAGFLSCGYSSGFGAAWKE--FKVEKGS-SVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFIN 247 (332)
Q Consensus 172 ~~aa~l~~~~~ta~~al~~~--~~~~~g~-~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~ 247 (332)
++++.+++.+.+|+.++... .++.+|+ +|+|+|+ |.+|++++++|+.+|+ ++++++.++++++.++++|++.+++
T Consensus 118 ~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~ 196 (323)
T TIGR02823 118 REAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVID 196 (323)
T ss_pred HHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEc
Confidence 99999998999998776433 3478898 9999998 9999999999999999 7888888888889999999999888
Q ss_pred CCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhH-hcCcEEEEeecc
Q 043260 248 PDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAI-ALGRNLKGTIFG 326 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~-~~~~~i~g~~~~ 326 (332)
.++ .+. .++.+..+ ++|+++|++|+. .+..++++++++ |+++.+|........++...+ ..++++.++...
T Consensus 197 ~~~---~~~--~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (323)
T TIGR02823 197 RED---LSP--PGKPLEKE-RWAGAVDTVGGH-TLANVLAQLKYG-GAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSV 268 (323)
T ss_pred ccc---HHH--HHHHhcCC-CceEEEECccHH-HHHHHHHHhCCC-CEEEEEcccCCCCccccHHHHhhcceEEEEEecc
Confidence 754 332 45555555 599999999985 788999999998 999999987543445555555 448899887543
No 98
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=2.7e-31 Score=246.62 Aligned_cols=249 Identities=24% Similarity=0.342 Sum_probs=216.1
Q ss_pred eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEEeecccCCC
Q 043260 27 WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECR 104 (332)
Q Consensus 27 l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdrV~~~~~~~c~ 104 (332)
+++++.+.|++.++||+||++++++|+.|.. +.+..+. ..+|.++|||++|+|+++|++++.+++||+|+..+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 6677888888999999999999999999998 6665432 346789999999999999999999999999984320
Q ss_pred CCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhhhhhcccchhhh
Q 043260 105 ECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSG 184 (332)
Q Consensus 105 ~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta 184 (332)
.|+|++|+.++.+.++++|+++++.+++.+++.+.+|
T Consensus 90 -------------------------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta 126 (323)
T cd05282 90 -------------------------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTA 126 (323)
T ss_pred -------------------------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHH
Confidence 1359999999999999999999999999998899999
Q ss_pred HHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHh
Q 043260 185 FGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEM 263 (332)
Q Consensus 185 ~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~ 263 (332)
|+++.+...+.+|++|||+|+ |.+|++++++|+.+|+ +++++..++++++.++++|++++++++. .++.+.+.++
T Consensus 127 ~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~ 202 (323)
T cd05282 127 WLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRVKEA 202 (323)
T ss_pred HHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHHHHH
Confidence 999877778899999999988 9999999999999999 8999999999999999999999998876 6788888888
Q ss_pred cCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHh-cCcEEEEeecccc
Q 043260 264 THGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIA-LGRNLKGTIFGGI 328 (332)
Q Consensus 264 ~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~i~g~~~~~~ 328 (332)
++++++|+|||++|+. .....+++++++ |+++.+|........++...+. .++++.++....+
T Consensus 203 ~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
T cd05282 203 TGGAGARLALDAVGGE-SATRLARSLRPG-GTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQW 266 (323)
T ss_pred hcCCCceEEEECCCCH-HHHHHHHhhCCC-CEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHh
Confidence 8888999999999995 667889999998 9999999775434567777666 5899999877654
No 99
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=5.7e-31 Score=243.25 Aligned_cols=251 Identities=26% Similarity=0.368 Sum_probs=208.5
Q ss_pred ecCCCCeEEEEEecCCCCCCeEEEEEeeeecCccccc-c-cCCCCC--CCCCcccccceeEEEEEeCCCCCCCCCCCEEE
Q 043260 21 WGEGEPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-S-SKGFPL--PLFPRVLGHEGVGMVESIGDEVKELKEGDIVI 96 (332)
Q Consensus 21 ~~~~~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~-~g~~~~--~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdrV~ 96 (332)
++.+. +++++++.|++.++||+||+.++++|++|+. + .+..+. ...|.++|||++|+|+++|++++.+++||+|+
T Consensus 2 ~~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 80 (312)
T cd08269 2 TGPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA 80 (312)
T ss_pred CCCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence 34444 9999999999999999999999999999998 6 664322 22478999999999999999999999999998
Q ss_pred eecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhhhhh
Q 043260 97 PTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGF 176 (332)
Q Consensus 97 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~aa~ 176 (332)
..+ .|+|++|+.++.+.++++|+++ ..++.
T Consensus 81 ~~~------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~ 110 (312)
T cd08269 81 GLS------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAF 110 (312)
T ss_pred Eec------------------------------------------------CCcceeeEEEchhheEECCCch--hhhHH
Confidence 431 2459999999999999999998 23333
Q ss_pred cccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchH
Q 043260 177 LSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSI 256 (332)
Q Consensus 177 l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~ 256 (332)
+..++.++++++. ..+++++++++|+|+|.+|++++++|+..|+..|+++.+++++.++++++|++.+++.+. .++
T Consensus 111 ~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~ 186 (312)
T cd08269 111 PGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---EAI 186 (312)
T ss_pred hhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---cCH
Confidence 3367889999874 788999999999988999999999999999933999999999999999999999988766 778
Q ss_pred HHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeeccc
Q 043260 257 SELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 257 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 327 (332)
.+.+.+++++.++|++||+.|....+..++++++++ |+++.+|.......++++..+.+ ++.+.++...+
T Consensus 187 ~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (312)
T cd08269 187 VERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERD 257 (312)
T ss_pred HHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCCcccCHHHHhhcCCEEEEecccC
Confidence 888888888889999999998877889999999998 99999997644445666555454 77887775444
No 100
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=5.2e-31 Score=243.10 Aligned_cols=260 Identities=26% Similarity=0.364 Sum_probs=222.0
Q ss_pred eeeEEEecCCCC--eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEGEP--WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
||++++.+.+.+ +++.+.+.|.+.++||+||+.++++|++|+. ..+.++. ..+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 799999875543 7777888888889999999999999999998 7665432 45678999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||+|+. +..+ |+|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~-----------------------------~~~~------------------g~~~~~~~~~~~~~~~~p~~~~ 113 (323)
T cd05276 81 VGDRVCA-----------------------------LLAG------------------GGYAEYVVVPAGQLLPVPEGLS 113 (323)
T ss_pred CCCEEEE-----------------------------ecCC------------------CceeEEEEcCHHHhccCCCCCC
Confidence 9999983 2222 3599999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 249 (332)
+.+++.++.++.++|+++.+...+.++++++|+|+ |++|++++++++..|+ +|+++++++++++.++++|++.+++..
T Consensus 114 ~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (323)
T cd05276 114 LVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYR 192 (323)
T ss_pred HHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCC
Confidence 99999999999999999877788999999999997 9999999999999999 899999999999988999998888877
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHh-cCcEEEEeeccc
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIA-LGRNLKGTIFGG 327 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~i~g~~~~~ 327 (332)
. .++.+.+.+.+.+.++|++|+++|+. .+...++++.++ |+++.+|..+.....+++..++ +++++.++....
T Consensus 193 ~---~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
T cd05276 193 T---EDFAEEVKEATGGRGVDVILDMVGGD-YLARNLRALAPD-GRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRS 266 (323)
T ss_pred c---hhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHHhhccC-CEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccc
Confidence 6 67777787777777899999999985 578899999998 9999999766533466666664 489999887655
No 101
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=5.8e-31 Score=246.00 Aligned_cols=258 Identities=20% Similarity=0.243 Sum_probs=214.5
Q ss_pred eeeEEEecCCCC-----eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 043260 15 AAAVVCWGEGEP-----WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKE 88 (332)
Q Consensus 15 ~~a~~~~~~~~~-----l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~ 88 (332)
|||++++++++. +..++.+.|++.++||+||+.++++|++|+. +.+..+...+|.++|||++|+|+++|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 689999988763 5566778888899999999999999999998 7776554456778999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCC
Q 043260 89 LKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPS 168 (332)
Q Consensus 89 ~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~ 168 (332)
+++||+|+.... ...+ |+|++|+.++.+.++++|++
T Consensus 81 ~~~Gd~V~~~~~--------------------------~~~~------------------g~~~~~~~v~~~~~~~ip~~ 116 (336)
T cd08252 81 FKVGDEVYYAGD--------------------------ITRP------------------GSNAEYQLVDERIVGHKPKS 116 (336)
T ss_pred CCCCCEEEEcCC--------------------------CCCC------------------ccceEEEEEchHHeeeCCCC
Confidence 999999984210 0112 45999999999999999999
Q ss_pred CChhhhhhcccchhhhHHHHHHhhCCCC-----CCEEEEECC-ChHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHHcC
Q 043260 169 IDLSLAGFLSCGYSSGFGAAWKEFKVEK-----GSSVAVFGL-GAVGLGVMDRARIQG-AAKIIGIDKNPCRKDKGEAFG 241 (332)
Q Consensus 169 ~~~~~aa~l~~~~~ta~~al~~~~~~~~-----g~~vlV~G~-g~vG~~~~~la~~~G-~~~Vi~~~~~~~~~~~~~~lg 241 (332)
+++++++.+++.+.+||+++.+...+++ |++|+|+|+ |++|++++++++.+| . +|++++.++++++.++++|
T Consensus 117 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g 195 (336)
T cd08252 117 LSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELG 195 (336)
T ss_pred CCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcC
Confidence 9999999999999999998877788877 999999986 999999999999999 7 9999999999999999999
Q ss_pred CCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHh-cCcEE
Q 043260 242 MTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIA-LGRNL 320 (332)
Q Consensus 242 a~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~i 320 (332)
++.+++... ++.+.+... .+.++|++||++++...+..++++++++ |+++.+|... ..++...+. .+.++
T Consensus 196 ~~~~~~~~~----~~~~~i~~~-~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~---~~~~~~~~~~~~~~~ 266 (336)
T cd08252 196 ADHVINHHQ----DLAEQLEAL-GIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ---EPLDLGPLKSKSASF 266 (336)
T ss_pred CcEEEeCCc----cHHHHHHhh-CCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC---CcccchhhhcccceE
Confidence 999987652 455556544 3458999999999767889999999998 9999998753 344555553 47888
Q ss_pred EEeecc
Q 043260 321 KGTIFG 326 (332)
Q Consensus 321 ~g~~~~ 326 (332)
.++.+.
T Consensus 267 ~~~~~~ 272 (336)
T cd08252 267 HWEFMF 272 (336)
T ss_pred EEEEee
Confidence 876654
No 102
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.1e-30 Score=241.80 Aligned_cols=259 Identities=23% Similarity=0.329 Sum_probs=211.2
Q ss_pred eeeEEEecCCC--CeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 043260 15 AAAVVCWGEGE--PWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKE 91 (332)
Q Consensus 15 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 91 (332)
||++++.+.+. .+++.+.+.|.++++||+||+.++++|++|+. ..+..+....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 68888887653 36677788888899999999999999999999 777655556688999999999999995 57999
Q ss_pred CCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCCh
Q 043260 92 GDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDL 171 (332)
Q Consensus 92 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~ 171 (332)
||+|+...... +... .|+|++|+.++...++++|+++++
T Consensus 79 Gd~V~~~~~~~-----------------------~~~~------------------~g~~~~~~~~~~~~~~~ip~~~~~ 117 (320)
T cd08243 79 GQRVATAMGGM-----------------------GRTF------------------DGSYAEYTLVPNEQVYAIDSDLSW 117 (320)
T ss_pred CCEEEEecCCC-----------------------CCCC------------------CcccceEEEcCHHHcEeCCCCCCH
Confidence 99998542100 1111 246999999999999999999999
Q ss_pred hhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCC
Q 043260 172 SLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD 250 (332)
Q Consensus 172 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 250 (332)
++++.+++++.+||+++.+...+++|++|||+|+ |.+|++++++|+..|+ +|+.++.++++.+.++++|++.+++. .
T Consensus 118 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-~ 195 (320)
T cd08243 118 AELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID-D 195 (320)
T ss_pred HHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-C
Confidence 9999999999999999877778999999999998 9999999999999999 89999999999999999999888754 3
Q ss_pred CCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC--CcccCChHhHh---cCcEEEEeec
Q 043260 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE--AKVPLNFPAIA---LGRNLKGTIF 325 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~--~~~~~~~~~~~---~~~~i~g~~~ 325 (332)
.++.+.+.++ ++++|+++|++++ ..+..++++++++ |+++.+|.... ...+.....++ .++++.++..
T Consensus 196 ---~~~~~~i~~~--~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (320)
T cd08243 196 ---GAIAEQLRAA--PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS 268 (320)
T ss_pred ---ccHHHHHHHh--CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence 4666777777 5589999999998 5889999999998 99999997543 11122222222 3777777654
No 103
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=2e-30 Score=239.58 Aligned_cols=263 Identities=24% Similarity=0.379 Sum_probs=220.9
Q ss_pred eeeEEEecCCCC--eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEGEP--WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFP-LPLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~-~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
||+++++.++.+ +.+.+++.|++.+++|+|++.++++|++|+. +.+..+ ....|.++|||++|+|+++|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 688888876543 7888999999999999999999999999998 766543 245788999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||+|+..+. |.. ...|++++|+.++.+.++++|++++
T Consensus 81 ~Gd~v~~~~~-------------------------~~~-----------------~~~g~~~~~~~~~~~~~~~ip~~~~ 118 (325)
T cd08253 81 VGDRVWLTNL-------------------------GWG-----------------RRQGTAAEYVVVPADQLVPLPDGVS 118 (325)
T ss_pred CCCEEEEecc-------------------------ccC-----------------CCCcceeeEEEecHHHcEeCCCCCC
Confidence 9999985431 100 0124599999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 249 (332)
+++++.+++++.+||+++....++.+|++++|+|+ |++|++++++++..|. +|+++++++++.+.++++|++.+++..
T Consensus 119 ~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 197 (325)
T cd08253 119 FEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYR 197 (325)
T ss_pred HHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC
Confidence 99999999999999999877789999999999997 9999999999999998 899999999999999999999888876
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeecc
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFG 326 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~ 326 (332)
. .++.+.+.+++.++++|++++++++. .+...+++++++ |+++.+|... ...++++..++. +.++.+....
T Consensus 198 ~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd08253 198 A---EDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPG-GRIVVYGSGG-LRGTIPINPLMAKEASIRGVLLY 269 (325)
T ss_pred C---cCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCC-CEEEEEeecC-CcCCCChhHHHhcCceEEeeehh
Confidence 6 67777788777777899999999984 678889999998 9999999765 334555555334 7778776544
No 104
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=3e-30 Score=237.86 Aligned_cols=246 Identities=20% Similarity=0.256 Sum_probs=204.4
Q ss_pred eeeEEEecCC-CCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 15 AAAVVCWGEG-EPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 15 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
||++++++.+ ..+++++.+.|.+.++||+||+.++++|+.|.. ..+. ..|.++|||++|+|+++|+++..|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~G 76 (305)
T cd08270 1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVG 76 (305)
T ss_pred CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCC
Confidence 6899998754 226677888888999999999999999999998 5421 235789999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChh
Q 043260 93 DIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLS 172 (332)
Q Consensus 93 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~ 172 (332)
|+|+. +..+ |+|++|+.++.++++++|++++++
T Consensus 77 d~V~~-----------------------------~~~~------------------g~~~~~~~v~~~~~~~ip~~~~~~ 109 (305)
T cd08270 77 ARVVG-----------------------------LGAM------------------GAWAELVAVPTGWLAVLPDGVSFA 109 (305)
T ss_pred CEEEE-----------------------------ecCC------------------cceeeEEEEchHHeEECCCCCCHH
Confidence 99983 2212 359999999999999999999999
Q ss_pred hhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCC
Q 043260 173 LAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDE 251 (332)
Q Consensus 173 ~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 251 (332)
+++.+++.+.|||+++.+.... +|++|+|+|+ |++|++++++++..|+ +|+.+++++++++.++++|++.+++...
T Consensus 110 ~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 186 (305)
T cd08270 110 QAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS- 186 (305)
T ss_pred HHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc-
Confidence 9999999999999988655544 6999999998 9999999999999998 8999999999999999999876654321
Q ss_pred CCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc---CcEEEEeeccc
Q 043260 252 PNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL---GRNLKGTIFGG 327 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~---~~~i~g~~~~~ 327 (332)
++.+ .++|+++|++|+. .+..++++++++ |+++.+|........++...+.. +.++.++....
T Consensus 187 ----------~~~~-~~~d~vl~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (305)
T cd08270 187 ----------ELSG-APVDLVVDSVGGP-QLARALELLAPG-GTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYD 252 (305)
T ss_pred ----------cccC-CCceEEEECCCcH-HHHHHHHHhcCC-CEEEEEeccCCCcccccHHHHhcccccceEEEEEccC
Confidence 1222 3799999999985 789999999998 99999997654445667666655 88888887653
No 105
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.98 E-value=7.3e-30 Score=235.14 Aligned_cols=256 Identities=28% Similarity=0.373 Sum_probs=215.4
Q ss_pred eeEEEecCCCC--eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 043260 16 AAVVCWGEGEP--WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEG 92 (332)
Q Consensus 16 ~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 92 (332)
||+.+...+.. +.+.+.+.|.+.++||+|||.++++|++|+. ..+..+. .+|.++|||++|+|+.+|++++++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 46666655442 6667777777889999999999999999998 7665443 567789999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChh
Q 043260 93 DIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLS 172 (332)
Q Consensus 93 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~ 172 (332)
|+|+... . .|+|++|+.++.+.++++|+++++.
T Consensus 80 ~~V~~~~-----------------------------~------------------~g~~~~~~~~~~~~~~~~p~~~~~~ 112 (320)
T cd05286 80 DRVAYAG-----------------------------P------------------PGAYAEYRVVPASRLVKLPDGISDE 112 (320)
T ss_pred CEEEEec-----------------------------C------------------CCceeEEEEecHHHceeCCCCCCHH
Confidence 9998321 0 2359999999999999999999999
Q ss_pred hhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCC
Q 043260 173 LAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDE 251 (332)
Q Consensus 173 ~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 251 (332)
+++.++..+.++++++.+..++.+|++|+|+|+ |++|++++++++.+|+ +|++++.++++.+.++++|++.+++...
T Consensus 113 ~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 190 (320)
T cd05286 113 TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRD- 190 (320)
T ss_pred HHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCCc-
Confidence 999998999999999878888999999999996 9999999999999999 8999999999999999999999988766
Q ss_pred CCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhH-hcCcEEEEeec
Q 043260 252 PNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAI-ALGRNLKGTIF 325 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~-~~~~~i~g~~~ 325 (332)
.++.+.+.+++.+.++|++|+++++ ..+..++++++++ |+++.+|........++...+ .+++++.++..
T Consensus 191 --~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (320)
T cd05286 191 --EDFVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSL 261 (320)
T ss_pred --hhHHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCCCCCCccCHHHHHhcCcEEEEEeh
Confidence 6777888888877789999999998 5888999999998 999999976543344555555 33777776543
No 106
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.97 E-value=3e-30 Score=242.64 Aligned_cols=235 Identities=24% Similarity=0.211 Sum_probs=198.3
Q ss_pred eeeEEEecCCCC---eEEEEEecCCC-CCCeEEEEEeeeecCccccc-ccCCCC---------------CCCCCcccccc
Q 043260 15 AAAVVCWGEGEP---WKVEEIQVEPP-KATEVRFKMLYASICHTDVL-SSKGFP---------------LPLFPRVLGHE 74 (332)
Q Consensus 15 ~~a~~~~~~~~~---l~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~-~~g~~~---------------~~~~p~v~G~e 74 (332)
|||+++++++++ +++++.+.|+| .++||+|||+++++|++|+. +.+... ...+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 789999887765 88999999999 49999999999999999998 666311 23568899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceee
Q 043260 75 GVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEY 154 (332)
Q Consensus 75 ~~G~Vv~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~ 154 (332)
++|+|+++|++++++++||+|+..+. +. ..|+|++|
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~--------------------------~~------------------~~g~~~~~ 116 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVP--------------------------PW------------------SQGTHAEY 116 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecC--------------------------CC------------------CCccceeE
Confidence 99999999999999999999984321 00 12469999
Q ss_pred EEecCCceEEcCCCCChhhhhhcccchhhhHHHHHHhhCCCC----CCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 043260 155 MVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEK----GSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDK 229 (332)
Q Consensus 155 ~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~----g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~ 229 (332)
+.++.+.++++|+++++++++.+++++.+||+++.+...+.+ |++|+|+|+ |++|++++++++.+|+ +|+++.+
T Consensus 117 ~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~ 195 (350)
T cd08248 117 VVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTCS 195 (350)
T ss_pred EEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeC
Confidence 999999999999999999999999999999998877666654 999999996 9999999999999999 7888775
Q ss_pred CcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 230 NPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 230 ~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
+ ++.+.++++|.+.+++... .++.+.+.. ..++|++||++|.. .+..++++++++ |+++.+|...
T Consensus 196 ~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~---~~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~ 260 (350)
T cd08248 196 T-DAIPLVKSLGADDVIDYNN---EDFEEELTE---RGKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPL 260 (350)
T ss_pred c-chHHHHHHhCCceEEECCC---hhHHHHHHh---cCCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCc
Confidence 4 6778889999988888765 455554443 35799999999985 889999999998 9999998653
No 107
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.97 E-value=1.3e-29 Score=235.74 Aligned_cols=259 Identities=20% Similarity=0.219 Sum_probs=207.4
Q ss_pred eeeEEEecCCC--CeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEGE--PWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
|||+++++++. .+++++.|.|+|+++||+||+.++++|++|.. +.+..+. ..+|.++|||++|+|++ +++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 78999998774 48899999999999999999999999999998 7665432 34678899999999999 7778899
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||+|+...... |... .|+|++|+.++.+.++++|++++
T Consensus 79 ~Gd~V~~~~~~~-----------------------~~~~------------------~g~~~~~~~v~~~~~~~lp~~~~ 117 (324)
T cd08288 79 PGDRVVLTGWGV-----------------------GERH------------------WGGYAQRARVKADWLVPLPEGLS 117 (324)
T ss_pred CCCEEEECCccC-----------------------CCCC------------------CCcceeEEEEchHHeeeCCCCCC
Confidence 999998531100 0001 24699999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHH--HhhCCC-CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeee
Q 043260 171 LSLAGFLSCGYSSGFGAAW--KEFKVE-KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFI 246 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~--~~~~~~-~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~ 246 (332)
+++++.++.++.+++.++. +..... ++++|+|+|+ |++|++++|+|+.+|+ +|++++.++++++.++++|+++++
T Consensus 118 ~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~ 196 (324)
T cd08288 118 ARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEII 196 (324)
T ss_pred HHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEE
Confidence 9999999989888887653 123445 6789999998 9999999999999999 899998999999999999999998
Q ss_pred CCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhH-hcCcEEEEeec
Q 043260 247 NPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAI-ALGRNLKGTIF 325 (332)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~-~~~~~i~g~~~ 325 (332)
++++ .+ ..+.+++.+ ++|.++|++++ ..+...+..++.+ |+++.+|.......++++..+ ..++++.|+..
T Consensus 197 ~~~~---~~--~~~~~~~~~-~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (324)
T cd08288 197 DRAE---LS--EPGRPLQKE-RWAGAVDTVGG-HTLANVLAQTRYG-GAVAACGLAGGADLPTTVMPFILRGVTLLGIDS 268 (324)
T ss_pred Ecch---hh--HhhhhhccC-cccEEEECCcH-HHHHHHHHHhcCC-CEEEEEEecCCCCCCcchhhhhccccEEEEEEe
Confidence 8754 22 245555554 58999999998 4677888899987 999999976432334555555 34889998753
No 108
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=2.1e-29 Score=233.29 Aligned_cols=259 Identities=24% Similarity=0.320 Sum_probs=214.9
Q ss_pred eeeEEEecCCCC--eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEGEP--WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFP-LPLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~-~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
|||+++++.+.+ +++++.+.|.+.++||+|++.++++|++|+. ..+... ....|.++|||++|+|+.+|+++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 689999887754 7788888888899999999999999999998 666543 233578899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||+|+.... |+. + ..|+|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~~-------------------------~~~--~---------------~~g~~~~~~~v~~~~~~~~p~~~~ 118 (326)
T cd08272 81 VGDEVYGCAG-------------------------GLG--G---------------LQGSLAEYAVVDARLLALKPANLS 118 (326)
T ss_pred CCCEEEEccC-------------------------CcC--C---------------CCCceeEEEEecHHHcccCCCCCC
Confidence 9999984321 110 0 124699999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 249 (332)
+.+++.++..+.+||+++.+..++++|++++|+|+ |.+|++++++++..|+ +|+.++++ ++.+.++++|++.+++..
T Consensus 119 ~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~ 196 (326)
T cd08272 119 MREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYR 196 (326)
T ss_pred HHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecc
Confidence 99999999999999998878889999999999986 9999999999999999 89998888 888888999998888876
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhcCcEEEEeecc
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIALGRNLKGTIFG 326 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~i~g~~~~ 326 (332)
. . +.+.+.+++++.++|+++|++++ ..+..++++++++ |+++.+|... ..++... ...++++.++...
T Consensus 197 ~---~-~~~~~~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~-~~~~~~~~~~~~~ 264 (326)
T cd08272 197 E---T-VVEYVAEHTGGRGFDVVFDTVGG-ETLDASFEAVALY-GRVVSILGGA--THDLAPL-SFRNATYSGVFTL 264 (326)
T ss_pred h---h-HHHHHHHhcCCCCCcEEEECCCh-HHHHHHHHHhccC-CEEEEEecCC--ccchhhH-hhhcceEEEEEcc
Confidence 5 5 77788888888899999999998 4788899999998 9999998663 1222222 1337777776643
No 109
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.97 E-value=3.4e-29 Score=231.66 Aligned_cols=260 Identities=24% Similarity=0.356 Sum_probs=219.4
Q ss_pred eeeEEEecCCCC--eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEGEP--WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
|||+.+...+.+ +.+++.+.|.+++++++||+.++++|++|+. ..+.++. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 678888765544 6667777777889999999999999999998 7665432 34578999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||+|+.. ..+ |+|++|+.++...++++|++++
T Consensus 81 ~Gd~V~~~-----------------------------~~~------------------~~~~~~~~~~~~~~~~ip~~~~ 113 (325)
T TIGR02824 81 VGDRVCAL-----------------------------VAG------------------GGYAEYVAVPAGQVLPVPEGLS 113 (325)
T ss_pred CCCEEEEc-----------------------------cCC------------------CcceeEEEecHHHcEeCCCCCC
Confidence 99999832 111 3599999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 249 (332)
+.+++.++.++.++|+++.+...++++++++|+|+ |++|++++++++..|+ +|+++.+++++.+.++++|++.+++..
T Consensus 114 ~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (325)
T TIGR02824 114 LVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYR 192 (325)
T ss_pred HHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecC
Confidence 99999999999999998878889999999999997 9999999999999999 899999999888888899998888776
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeeccc
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 327 (332)
. .++.+.+.+..++.++|++++++++. .+..++++++++ |+++.+|........+++..++. ++++.++....
T Consensus 193 ~---~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (325)
T TIGR02824 193 E---EDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALD-GRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRA 266 (325)
T ss_pred c---hhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccC-cEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhh
Confidence 5 67777788877777899999999984 788999999998 99999997654223667766634 99999987654
No 110
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.97 E-value=1.5e-29 Score=238.43 Aligned_cols=239 Identities=21% Similarity=0.233 Sum_probs=193.6
Q ss_pred eeeEEEecCCCCeEEEEEecCCC---CCCeEEEEEeeeecCccccc-ccCCCCCCC-CCcccccceeEEEEEeCCCCC-C
Q 043260 15 AAAVVCWGEGEPWKVEEIQVEPP---KATEVRFKMLYASICHTDVL-SSKGFPLPL-FPRVLGHEGVGMVESIGDEVK-E 88 (332)
Q Consensus 15 ~~a~~~~~~~~~l~~~~~~~p~~---~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~-~p~v~G~e~~G~Vv~vG~~v~-~ 88 (332)
.|+++++++++++++++++.|.| +++||+||+.++++|++|+. +.+...... .|.++|||++|+|+++|++++ .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (352)
T cd08247 1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE 80 (352)
T ss_pred CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence 37899999988888888888877 89999999999999999998 543221112 477899999999999999998 8
Q ss_pred CCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCC----ceEE
Q 043260 89 LKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN----YVVK 164 (332)
Q Consensus 89 ~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~----~v~~ 164 (332)
|++||+|+......|+ ..|+|++|+.++.. .+++
T Consensus 81 ~~~Gd~V~~~~~~~~~------------------------------------------~~g~~~~~~~v~~~~~~~~~~~ 118 (352)
T cd08247 81 WKVGDEVCGIYPHPYG------------------------------------------GQGTLSQYLLVDPKKDKKSITR 118 (352)
T ss_pred CCCCCEEEEeecCCCC------------------------------------------CCceeeEEEEEccccccceeEE
Confidence 9999999854221110 12469999999987 7999
Q ss_pred cCCCCChhhhhhcccchhhhHHHHHHhh-CCCCCCEEEEECC-ChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHHcC
Q 043260 165 VDPSIDLSLAGFLSCGYSSGFGAAWKEF-KVEKGSSVAVFGL-GAVGLGVMDRARIQGA-AKIIGIDKNPCRKDKGEAFG 241 (332)
Q Consensus 165 lP~~~~~~~aa~l~~~~~ta~~al~~~~-~~~~g~~vlV~G~-g~vG~~~~~la~~~G~-~~Vi~~~~~~~~~~~~~~lg 241 (332)
+|+++++++++.++.++.|||+++.+.. .+++|++|+|+|+ |.+|++++++|+.+|. +.|+.+. ++++.+.++++|
T Consensus 119 lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g 197 (352)
T cd08247 119 KPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLG 197 (352)
T ss_pred CCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhC
Confidence 9999999999999999999999986666 7999999999998 8999999999999854 3566665 455566778999
Q ss_pred CCeeeCCCCCCCch---HHHHHHH-hcCCCCccEEEEcCCChHHHHHHHHHhc---cCCcEEEEEc
Q 043260 242 MTDFINPDDEPNKS---ISELVKE-MTHGTGVDYGFECTGVASLISEALEATK---LGKGKVMAIG 300 (332)
Q Consensus 242 a~~v~~~~~~~~~~---~~~~~~~-~~~~~g~d~vid~~g~~~~~~~~~~~l~---~~~G~~v~~G 300 (332)
++.+++.++ .+ +...+.+ .+++.++|++||++|+...+..++++++ ++ |+++.++
T Consensus 198 ~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~ 259 (352)
T cd08247 198 ADHFIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIV 259 (352)
T ss_pred CCEEEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEe
Confidence 999988765 33 4444444 4435689999999998667889999999 98 9999875
No 111
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=2.1e-29 Score=233.62 Aligned_cols=238 Identities=27% Similarity=0.366 Sum_probs=206.3
Q ss_pred eeeEEEecCC--CCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 043260 15 AAAVVCWGEG--EPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKE 91 (332)
Q Consensus 15 ~~a~~~~~~~--~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 91 (332)
|||+++.+++ +.+++++++.|++.+++|+||+.++++|++|+. +.+.......|.++|||++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7999999988 359999999999999999999999999999998 7665433334778999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCCh
Q 043260 92 GDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDL 171 (332)
Q Consensus 92 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~ 171 (332)
||+|+..+. +.. .|+|++|+.++.+.++++|+++++
T Consensus 81 Gd~V~~~~~--------------------------~~~------------------~~~~~s~~~~~~~~~~~ip~~~~~ 116 (325)
T cd08271 81 GDRVAYHAS--------------------------LAR------------------GGSFAEYTVVDARAVLPLPDSLSF 116 (325)
T ss_pred CCEEEeccC--------------------------CCC------------------CccceeEEEeCHHHeEECCCCCCH
Confidence 999985321 111 235999999999999999999999
Q ss_pred hhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCC
Q 043260 172 SLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD 250 (332)
Q Consensus 172 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 250 (332)
.+++.+.+++.+|++++.+...+++|++++|+|+ |++|++++++++..|+ +|+++. ++++.+.+.++|++.+++...
T Consensus 117 ~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~~ 194 (325)
T cd08271 117 EEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYND 194 (325)
T ss_pred HHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCCC
Confidence 9999999999999999878888999999999998 8999999999999998 788776 667788888899999988776
Q ss_pred CCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
.++.+.+.+++.++++|++++++++. .....++++++. |+++.+|...
T Consensus 195 ---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-G~~v~~~~~~ 242 (325)
T cd08271 195 ---EDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFN-GHLVCIQGRP 242 (325)
T ss_pred ---ccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccC-CEEEEEcCCC
Confidence 66777888888777899999999985 567789999998 9999997554
No 112
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=5.4e-30 Score=239.02 Aligned_cols=224 Identities=27% Similarity=0.451 Sum_probs=185.7
Q ss_pred eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-C---CCCcccccceeEEEEE---eC-CCCCCCCCCCEEEe
Q 043260 27 WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-P---LFPRVLGHEGVGMVES---IG-DEVKELKEGDIVIP 97 (332)
Q Consensus 27 l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~---~~p~v~G~e~~G~Vv~---vG-~~v~~~~vGdrV~~ 97 (332)
...++.++|.|.++|++|++.++++|+.|+. ..+.+.. . .+|.+++.++.|++.. .| ..+..+..||++.
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~- 98 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVV- 98 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEe-
Confidence 5567899999999999999999999999999 7776544 2 4776666666555433 34 2233455565554
Q ss_pred ecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhhhhhc
Q 043260 98 TFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFL 177 (332)
Q Consensus 98 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~aa~l 177 (332)
+... .|+|+||+.+|...++++|+++++++||++
T Consensus 99 ----------------------------~~~~------------------~g~~aey~v~p~~~~~~~P~~l~~~~aa~~ 132 (347)
T KOG1198|consen 99 ----------------------------AFLS------------------SGGLAEYVVVPEKLLVKIPESLSFEEAAAL 132 (347)
T ss_pred ----------------------------eccC------------------CCceeeEEEcchhhccCCCCccChhhhhcC
Confidence 1222 246999999999999999999999999999
Q ss_pred ccchhhhHHHHHHhh------CCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCC
Q 043260 178 SCGYSSGFGAAWKEF------KVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDD 250 (332)
Q Consensus 178 ~~~~~ta~~al~~~~------~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 250 (332)
+.++.|||.++.... ++++|++|||+|+ |++|++++|+|+..|+ ..+++.++++++++++++|+|+++|+++
T Consensus 133 p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~ 211 (347)
T KOG1198|consen 133 PLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKD 211 (347)
T ss_pred chHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCC
Confidence 999999999999888 8999999999987 9999999999999995 6777778999999999999999999999
Q ss_pred CCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
.++.+.+.+.+ +.+||+||||+|+. .+...+.++..+ |+...++..++
T Consensus 212 ---~~~~e~~kk~~-~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~~~ 259 (347)
T KOG1198|consen 212 ---ENVVELIKKYT-GKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLVGD 259 (347)
T ss_pred ---HHHHHHHHhhc-CCCccEEEECCCCC-ccccchhhhccC-CceEEEEeccc
Confidence 99999999988 66999999999995 777888888887 76555555544
No 113
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.6e-28 Score=227.48 Aligned_cols=264 Identities=26% Similarity=0.366 Sum_probs=218.6
Q ss_pred eeeEEEecCCC--CeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEGE--PWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
||+++++..+. .+.+.+.+.|.+.+++++|++.++++|++|.. ..+.... ..+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 68888886553 37777888888899999999999999999988 6665432 34578899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||+|+..+.. +... .|+|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~~~------------------------~~~~------------------~g~~~~~~~~~~~~~~~~p~~~~ 118 (328)
T cd08268 81 VGDRVSVIPAA------------------------DLGQ------------------YGTYAEYALVPAAAVVKLPDGLS 118 (328)
T ss_pred CCCEEEecccc------------------------ccCC------------------CccceEEEEechHhcEeCCCCCC
Confidence 99999854321 0001 24699999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 249 (332)
+++++.+++++.++|.++.+...+.++++++|+|+ |.+|++++++++..|+ +++.++.++++++.++++|.+.+++..
T Consensus 119 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 197 (328)
T cd08268 119 FVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTD 197 (328)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecC
Confidence 99999999999999999877788999999999998 9999999999999998 899999999999888889998888876
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHh-HhcCcEEEEeecc
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPA-IALGRNLKGTIFG 326 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~~~~~~i~g~~~~ 326 (332)
. .++.+.+.+++.+.++|++++++++ .....++++++++ |+++.+|........++... +.+++++.+....
T Consensus 198 ~---~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (328)
T cd08268 198 E---EDLVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLD 270 (328)
T ss_pred C---ccHHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecc
Confidence 6 6777778777777789999999998 5788999999998 99999987653223445443 3448888887654
No 114
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.97 E-value=9.3e-29 Score=230.42 Aligned_cols=254 Identities=26% Similarity=0.275 Sum_probs=205.2
Q ss_pred eeeEEEecCC------CCeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCC---CCCCCcccccceeEEEEEeCC
Q 043260 15 AAAVVCWGEG------EPWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFP---LPLFPRVLGHEGVGMVESIGD 84 (332)
Q Consensus 15 ~~a~~~~~~~------~~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~---~~~~p~v~G~e~~G~Vv~vG~ 84 (332)
.|+|++++.. +.+++++.+.|++.+++|+||+.++++|+.|.. ..+... ....+.++|+|++|+|+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 4677776433 238899999999999999999999999998766 443211 112345789999999999996
Q ss_pred CCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecC-CceE
Q 043260 85 EVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDA-NYVV 163 (332)
Q Consensus 85 ~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~-~~v~ 163 (332)
+ ++++||+|+.. ++|++|+.++. +.++
T Consensus 82 ~--~~~~Gd~V~~~--------------------------------------------------~~~~~~~~v~~~~~~~ 109 (329)
T cd05288 82 P--DFKVGDLVSGF--------------------------------------------------LGWQEYAVVDGASGLR 109 (329)
T ss_pred C--CCCCCCEEecc--------------------------------------------------cceEEEEEecchhhcE
Confidence 4 79999999821 14999999999 9999
Q ss_pred EcCCCCC--hhhhhh-cccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH
Q 043260 164 KVDPSID--LSLAGF-LSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA 239 (332)
Q Consensus 164 ~lP~~~~--~~~aa~-l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~ 239 (332)
++|++++ +.+++. +++++.|||+++.+...+.++++|||+|+ |++|++++++++..|+ +|+++++++++.+.+++
T Consensus 110 ~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~ 188 (329)
T cd05288 110 KLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVE 188 (329)
T ss_pred ECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 9999995 545555 88899999999877788999999999996 9999999999999999 89999999999999988
Q ss_pred -cCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCC-cc----cCChHh
Q 043260 240 -FGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEA-KV----PLNFPA 313 (332)
Q Consensus 240 -lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~-~~----~~~~~~ 313 (332)
+|++.++++++ .++.+.+.++++ .++|++||++|+ ..+..++++++++ |+++.+|..... .. .++...
T Consensus 189 ~~g~~~~~~~~~---~~~~~~v~~~~~-~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~ 262 (329)
T cd05288 189 ELGFDAAINYKT---PDLAEALKEAAP-DGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGN 262 (329)
T ss_pred hcCCceEEecCC---hhHHHHHHHhcc-CCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHH
Confidence 99999998876 677777887775 589999999998 5889999999998 999999976542 11 123333
Q ss_pred Hhc-CcEEEEeeccc
Q 043260 314 IAL-GRNLKGTIFGG 327 (332)
Q Consensus 314 ~~~-~~~i~g~~~~~ 327 (332)
++. ++++.++....
T Consensus 263 ~~~~~~~~~~~~~~~ 277 (329)
T cd05288 263 IITKRLTMQGFIVSD 277 (329)
T ss_pred HhhCcceEEeecchh
Confidence 344 88888876544
No 115
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.97 E-value=1.1e-28 Score=226.21 Aligned_cols=237 Identities=23% Similarity=0.334 Sum_probs=201.4
Q ss_pred cCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEEeecccCCCCCccccc
Q 043260 34 VEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTS 111 (332)
Q Consensus 34 ~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~ 111 (332)
+|++.+++|+||+.++++|++|+. +.+.++. ..+|.++|||++|+|+++|++++++++||+|+.....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 578899999999999999999998 7665443 3568899999999999999999999999999843210
Q ss_pred CCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhhhhhcccchhhhHHHHHHh
Q 043260 112 EMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKE 191 (332)
Q Consensus 112 g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~ 191 (332)
..|+|++|+.++.+.++++|+++++++++.++.++.+||+++ +.
T Consensus 72 -----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~ 115 (303)
T cd08251 72 -----------------------------------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-AR 115 (303)
T ss_pred -----------------------------------CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-Hh
Confidence 124599999999999999999999999999999999999987 57
Q ss_pred hCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCcc
Q 043260 192 FKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVD 270 (332)
Q Consensus 192 ~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d 270 (332)
.++++|++++|+|+ |.+|++++++++.+|+ +|+++++++++++.++++|++.+++... .++.+.+.+++++.++|
T Consensus 116 ~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d 191 (303)
T cd08251 116 AGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGRGVD 191 (303)
T ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCCCce
Confidence 89999999999976 9999999999999999 8999999999999999999999998876 67888888888888999
Q ss_pred EEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhcCcEEEE
Q 043260 271 YGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIALGRNLKG 322 (332)
Q Consensus 271 ~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~g 322 (332)
+++|++++ ..+...+++++++ |+++.+|..+. ....++...+..+..+..
T Consensus 192 ~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (303)
T cd08251 192 VVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHS 242 (303)
T ss_pred EEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEE
Confidence 99999976 5888999999998 99999987653 233455544444554443
No 116
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.97 E-value=4.5e-29 Score=220.59 Aligned_cols=243 Identities=24% Similarity=0.317 Sum_probs=203.6
Q ss_pred CeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeC--CCCCCCCCCCEEEeecccC
Q 043260 26 PWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIG--DEVKELKEGDIVIPTFIGE 102 (332)
Q Consensus 26 ~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG--~~v~~~~vGdrV~~~~~~~ 102 (332)
+++++++++|+|++||||+|+.|.+++| .++ ++...+..-.|.-+|-..+|.+++.. |+..+|++||.|+..
T Consensus 26 ~F~lee~~vp~p~~GqvLl~~~ylS~DP-ymRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~---- 100 (340)
T COG2130 26 DFRLEEVDVPEPGEGQVLLRTLYLSLDP-YMRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV---- 100 (340)
T ss_pred CceeEeccCCCCCcCceEEEEEEeccCH-HHeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec----
Confidence 3999999999999999999999999998 444 66665555567778887776665543 567789999999832
Q ss_pred CCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCCh--hhhhhcccc
Q 043260 103 CRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDL--SLAGFLSCG 180 (332)
Q Consensus 103 c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~--~~aa~l~~~ 180 (332)
.+|+||..++.+.+.|+++..-+ .....+..+
T Consensus 101 ----------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmp 134 (340)
T COG2130 101 ----------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMP 134 (340)
T ss_pred ----------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCc
Confidence 14999999999999999865322 222335669
Q ss_pred hhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH-cCCCeeeCCCCCCCchHHH
Q 043260 181 YSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA-FGMTDFINPDDEPNKSISE 258 (332)
Q Consensus 181 ~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~ 258 (332)
..|||.+|.+.++.++|++|+|.+| |++|..+.|+||..|+ +||.+..++||.+++++ +|.|.++|+++ +++.+
T Consensus 135 G~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d~~~ 210 (340)
T COG2130 135 GLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---EDFAQ 210 (340)
T ss_pred hHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---ccHHH
Confidence 9999999999999999999999988 9999999999999999 99999999999999987 99999999999 89999
Q ss_pred HHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC--Cc-ccCC---hHhHhc-CcEEEEeecc
Q 043260 259 LVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE--AK-VPLN---FPAIAL-GRNLKGTIFG 326 (332)
Q Consensus 259 ~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~--~~-~~~~---~~~~~~-~~~i~g~~~~ 326 (332)
++.+.++. |.|+.||++|+ ..+...+..|+.. +|+.++|..+. .+ .+.- ...++. .+++.|+...
T Consensus 211 ~L~~a~P~-GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~ 282 (340)
T COG2130 211 ALKEACPK-GIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVA 282 (340)
T ss_pred HHHHHCCC-CeEEEEEcCCc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEec
Confidence 99999986 99999999999 5999999999998 99999998665 22 2222 233444 8899999883
No 117
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=2.2e-28 Score=227.97 Aligned_cols=232 Identities=28% Similarity=0.377 Sum_probs=196.4
Q ss_pred eeeEEEecCCCC--eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 043260 15 AAAVVCWGEGEP--WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKELK 90 (332)
Q Consensus 15 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 90 (332)
.||++++..+.+ +++++.+.|.|.++||+||+.++++|++|+. +.+..+. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (331)
T cd08273 1 NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFE 80 (331)
T ss_pred CeeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCC
Confidence 378888876643 8888889999999999999999999999998 7665432 35688999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCC
Q 043260 91 EGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSID 170 (332)
Q Consensus 91 vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~ 170 (332)
+||+|+..+ .. |+|++|+.++.+.++++|++++
T Consensus 81 ~Gd~V~~~~-----------------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~ 113 (331)
T cd08273 81 VGDRVAALT-----------------------------RV------------------GGNAEYINLDAKYLVPVPEGVD 113 (331)
T ss_pred CCCEEEEeC-----------------------------CC------------------cceeeEEEechHHeEECCCCCC
Confidence 999998431 11 3599999999999999999999
Q ss_pred hhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCC
Q 043260 171 LSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 171 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 249 (332)
+++++.+++++.+||+++.+...+.+|++|+|+|+ |++|++++++++..|+ +|+.++. +++.+.++++|++. ++..
T Consensus 114 ~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~ 190 (331)
T cd08273 114 AAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYR 190 (331)
T ss_pred HHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCC
Confidence 99999999999999999877788999999999997 9999999999999999 8998887 88888889999764 3443
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
. .++.+. +... .++|++++++++. .+..++++++++ |+++.+|....
T Consensus 191 ~---~~~~~~--~~~~-~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~ 237 (331)
T cd08273 191 T---KDWLPA--MLTP-GGVDVVFDGVGGE-SYEESYAALAPG-GTLVCYGGNSS 237 (331)
T ss_pred C---cchhhh--hccC-CCceEEEECCchH-HHHHHHHHhcCC-CEEEEEccCCC
Confidence 3 344333 3333 4899999999986 588999999998 99999997764
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.96 E-value=1.1e-27 Score=221.24 Aligned_cols=259 Identities=27% Similarity=0.423 Sum_probs=214.2
Q ss_pred eeeEEEecCCC--CeEEEEEecCCCC-CCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 043260 15 AAAVVCWGEGE--PWKVEEIQVEPPK-ATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKEL 89 (332)
Q Consensus 15 ~~a~~~~~~~~--~l~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~ 89 (332)
|+|+++..++. .+++.+.+ |.+. +++++||+.++++|++|+. +.+.+.. ...|.++|||++|+|+.+|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 68888875433 26777777 6665 5999999999999999998 6665432 3346689999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCC
Q 043260 90 KEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSI 169 (332)
Q Consensus 90 ~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~ 169 (332)
++||+|+..+ . .|++++|+.++.+.++++|+++
T Consensus 80 ~~G~~V~~~~-----------------------------~------------------~~~~~~~~~~~~~~~~~ip~~~ 112 (323)
T cd08241 80 KVGDRVVALT-----------------------------G------------------QGGFAEEVVVPAAAVFPLPDGL 112 (323)
T ss_pred CCCCEEEEec-----------------------------C------------------CceeEEEEEcCHHHceeCCCCC
Confidence 9999998431 1 1359999999999999999999
Q ss_pred ChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCC
Q 043260 170 DLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINP 248 (332)
Q Consensus 170 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 248 (332)
++.+++.+..++.+|+.++.+...++++++++|+|+ |++|++++++++..|+ +|++++.++++.+.++++|++.+++.
T Consensus 113 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (323)
T cd08241 113 SFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDY 191 (323)
T ss_pred CHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeec
Confidence 999998888899999998877788999999999998 9999999999999999 89999999999999999999888877
Q ss_pred CCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhH-hcCcEEEEeeccc
Q 043260 249 DDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAI-ALGRNLKGTIFGG 327 (332)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 327 (332)
.. .++.+.+.+.+++.++|.+++++|+ ..+..++++++++ |+++.+|........+++... ..++++.++....
T Consensus 192 ~~---~~~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
T cd08241 192 RD---PDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGA 266 (323)
T ss_pred CC---ccHHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCCCCcCcCCHHHHhhcCcEEEEEeccc
Confidence 66 6788888888887789999999998 5788999999998 999999976532122444233 3388888876554
No 119
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.96 E-value=1e-27 Score=217.64 Aligned_cols=229 Identities=23% Similarity=0.293 Sum_probs=195.1
Q ss_pred CeEEEEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEeecccCCCCCcccccCCcccCC
Q 043260 40 TEVRFKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCL 118 (332)
Q Consensus 40 ~eVlVkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~ 118 (332)
+||+||+.++++|++|+. ..+.. ..+|.++|||++|+|+++|++++.+++||+|+...
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 589999999999999999 76654 34678999999999999999999999999998431
Q ss_pred CCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCC
Q 043260 119 KYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGS 198 (332)
Q Consensus 119 ~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~ 198 (332)
.|+|+||+.++.+.++++|+++++.+++.+++++.++|.++.+...+++|+
T Consensus 60 -----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~ 110 (293)
T cd05195 60 -----------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGE 110 (293)
T ss_pred -----------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCC
Confidence 245999999999999999999999999999899999999987778999999
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcC--CCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEc
Q 043260 199 SVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFG--MTDFINPDDEPNKSISELVKEMTHGTGVDYGFEC 275 (332)
Q Consensus 199 ~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lg--a~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~ 275 (332)
+|+|+|+ |.+|++++++++.+|+ +|++++.++++.+.++++| ++.+++... .++.+.+.+.+.++++|+++++
T Consensus 111 ~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~ 186 (293)
T cd05195 111 SVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDVVLNS 186 (293)
T ss_pred EEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceEEEeC
Confidence 9999986 9999999999999999 8999999989999998888 778887765 6777888888877789999999
Q ss_pred CCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhcCcEEEEee
Q 043260 276 TGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIALGRNLKGTI 324 (332)
Q Consensus 276 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~g~~ 324 (332)
+++. .+..++++++++ |+++.+|.... ....++...+..++++.+..
T Consensus 187 ~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (293)
T cd05195 187 LSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVD 234 (293)
T ss_pred CCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEe
Confidence 9996 889999999998 99999997654 22334444433456665544
No 120
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.96 E-value=1.1e-27 Score=219.85 Aligned_cols=234 Identities=22% Similarity=0.297 Sum_probs=196.5
Q ss_pred eeeEEEecCCCC--eEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 043260 15 AAAVVCWGEGEP--WKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFP---LPLFPRVLGHEGVGMVESIGDEVKE 88 (332)
Q Consensus 15 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~---~~~~p~v~G~e~~G~Vv~vG~~v~~ 88 (332)
|||++++.++.. +.+++.+.|.++++||+||+.++++|+.|+. +.+... ...+|..+|||++|+|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 688888876642 5667778888899999999999999999998 766542 3455889999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCC
Q 043260 89 LKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPS 168 (332)
Q Consensus 89 ~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~ 168 (332)
+++||+|+..+.. .. .|+|++|+.++...++++|++
T Consensus 81 ~~~G~~V~~~~~~--------------------------~~------------------~g~~~~~~~~~~~~~~~~p~~ 116 (309)
T cd05289 81 FKVGDEVFGMTPF--------------------------TR------------------GGAYAEYVVVPADELALKPAN 116 (309)
T ss_pred CCCCCEEEEccCC--------------------------CC------------------CCcceeEEEecHHHhccCCCC
Confidence 9999999844210 00 245999999999999999999
Q ss_pred CChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeC
Q 043260 169 IDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFIN 247 (332)
Q Consensus 169 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~ 247 (332)
+++..++.+++.+.++++++.+...+.+|++++|+|+ |.+|++++++++..|+ +|++++.++ +.+.++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~ 194 (309)
T cd05289 117 LSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVID 194 (309)
T ss_pred CCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEe
Confidence 9999999999899999998877667999999999997 9999999999999999 888888777 888888999888887
Q ss_pred CCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 248 PDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
... .++.+ .+.+.++|++++++++. ....++++++++ |+++.+|...
T Consensus 195 ~~~---~~~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~ 241 (309)
T cd05289 195 YTK---GDFER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPP 241 (309)
T ss_pred CCC---Cchhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCC
Confidence 665 44433 34455899999999985 888999999998 9999999765
No 121
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=8.9e-27 Score=217.07 Aligned_cols=256 Identities=24% Similarity=0.311 Sum_probs=205.6
Q ss_pred eeEEEecCCC--CeEEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 043260 16 AAVVCWGEGE--PWKVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGHEGVGMVESIGDEVKELKE 91 (332)
Q Consensus 16 ~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~v 91 (332)
||+++...+. .+.+.+.+.|++.+++|+||+.++++|++|+. +.+.++. ...|.++|||++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4666665443 37777888888899999999999999999998 7665432 345778999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCCh
Q 043260 92 GDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDL 171 (332)
Q Consensus 92 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~ 171 (332)
||+|+... .+ |+|++|+.++.+.++++|+++++
T Consensus 81 G~~V~~~~-----------------------------~~------------------~~~~~~~~~~~~~~~~ip~~~~~ 113 (337)
T cd08275 81 GDRVMGLT-----------------------------RF------------------GGYAEVVNVPADQVFPLPDGMSF 113 (337)
T ss_pred CCEEEEec-----------------------------CC------------------CeeeeEEEecHHHeEECCCCCCH
Confidence 99998431 11 35999999999999999999999
Q ss_pred hhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEc-CCcchHHHHHHcCCCeeeCCC
Q 043260 172 SLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGID-KNPCRKDKGEAFGMTDFINPD 249 (332)
Q Consensus 172 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~-~~~~~~~~~~~lga~~v~~~~ 249 (332)
++++.+++++.++|+++.+...+++|++|+|+|+ |.+|++++++++.. . .+++++ .++++.+.++++|++.+++..
T Consensus 114 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 191 (337)
T cd08275 114 EEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVIDYR 191 (337)
T ss_pred HHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeCC
Confidence 9999999999999999878889999999999998 99999999999998 2 233333 234577888889998888877
Q ss_pred CCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-Ccc---------------cCChHh
Q 043260 250 DEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKV---------------PLNFPA 313 (332)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~---------------~~~~~~ 313 (332)
. .++.+.+.+.++ .++|+++|++|+. .+..++++++++ |+++.+|.... ... .++...
T Consensus 192 ~---~~~~~~~~~~~~-~~~d~v~~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (337)
T cd08275 192 T---QDYVEEVKKISP-EGVDIVLDALGGE-DTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMK 265 (337)
T ss_pred C---CcHHHHHHHHhC-CCceEEEECCcHH-HHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHH
Confidence 6 677777877775 5899999999984 778999999998 99999997653 111 222233
Q ss_pred Hhc-CcEEEEeecc
Q 043260 314 IAL-GRNLKGTIFG 326 (332)
Q Consensus 314 ~~~-~~~i~g~~~~ 326 (332)
++. ++++.++...
T Consensus 266 ~~~~~~~~~~~~~~ 279 (337)
T cd08275 266 LISENKSVLGFNLG 279 (337)
T ss_pred HhhcCceEEEeech
Confidence 344 8888887654
No 122
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.95 E-value=8e-27 Score=211.68 Aligned_cols=225 Identities=22% Similarity=0.323 Sum_probs=191.2
Q ss_pred EEEeeeecCccccc-ccCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCcc
Q 043260 44 FKMLYASICHTDVL-SSKGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPF 122 (332)
Q Consensus 44 Vkv~~~~i~~~D~~-~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~ 122 (332)
||+.++++|++|+. +.+.++ .|.++|||++|+|+++|++++.+++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 89999999999999 766543 367899999999999999999999999998321
Q ss_pred ccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEE
Q 043260 123 TFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAV 202 (332)
Q Consensus 123 ~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV 202 (332)
.|+|++|+.++.+.++++|+++++++++.+++++.++|.++.+...+.+|++|+|
T Consensus 56 -------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv 110 (288)
T smart00829 56 -------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLI 110 (288)
T ss_pred -------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 1459999999999999999999999999999999999998877788999999999
Q ss_pred ECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCC--CeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCCh
Q 043260 203 FGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGM--TDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVA 279 (332)
Q Consensus 203 ~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~ 279 (332)
+|+ |.+|++++++++..|+ +|+++++++++++.++++|+ +.+++... .++.+.+.+.++++++|+++|++++
T Consensus 111 ~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~- 185 (288)
T smart00829 111 HAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNSLAG- 185 (288)
T ss_pred ecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeCCCH-
Confidence 986 9999999999999999 89999999999999999998 77887766 6677788888877789999999996
Q ss_pred HHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhcCcEEEEeec
Q 043260 280 SLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIALGRNLKGTIF 325 (332)
Q Consensus 280 ~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~g~~~ 325 (332)
..+..++++++++ |+++.+|.... ....++...+..++++.+...
T Consensus 186 ~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T smart00829 186 EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDL 231 (288)
T ss_pred HHHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEH
Confidence 6888999999998 99999997643 223444444334666666543
No 123
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=1.2e-26 Score=214.67 Aligned_cols=224 Identities=23% Similarity=0.266 Sum_probs=185.6
Q ss_pred EEEEEecCCCCCCeEEEEEeeeecCccccc-ccCCCC---CCCCCcccccceeEEEEEeCCCCCCCCCCCEEEeecccCC
Q 043260 28 KVEEIQVEPPKATEVRFKMLYASICHTDVL-SSKGFP---LPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGEC 103 (332)
Q Consensus 28 ~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~-~~g~~~---~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdrV~~~~~~~c 103 (332)
++++.+.|++.++||+|+++++++|++|+. +.+..+ ....|..+|||++|.|+++|+++.++++||+|+..+..
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 778889999999999999999999999998 766542 13356789999999999999999999999999843210
Q ss_pred CCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhhhhhcccchhh
Q 043260 104 RECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSS 183 (332)
Q Consensus 104 ~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~aa~l~~~~~t 183 (332)
.. .|+|++|+.++.+.++++|+++++++++.+++++.+
T Consensus 93 ------------------------~~------------------~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~ 130 (319)
T cd08267 93 ------------------------KG------------------GGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLT 130 (319)
T ss_pred ------------------------CC------------------CceeeEEEEechhheEECCCCCCHHHHHhhhhHHHH
Confidence 00 145999999999999999999999999999999999
Q ss_pred hHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHH
Q 043260 184 GFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKE 262 (332)
Q Consensus 184 a~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~ 262 (332)
||+++.+...+++|++|+|+|+ |++|++++++++..|+ +|++++.+ ++.+.++++|++++++... .++. ..
T Consensus 131 a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~---~~ 202 (319)
T cd08267 131 ALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV---AL 202 (319)
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---hh
Confidence 9999877777999999999998 9999999999999999 89888765 7888889999988887765 3333 34
Q ss_pred hcCCCCccEEEEcCCCh-HHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 263 MTHGTGVDYGFECTGVA-SLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 263 ~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
.+.+.++|++++++++. ......+..++++ |+++.+|....
T Consensus 203 ~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~ 244 (319)
T cd08267 203 TAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPS 244 (319)
T ss_pred ccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccc
Confidence 55566899999999852 2334444458998 99999997654
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.92 E-value=2.3e-23 Score=189.65 Aligned_cols=201 Identities=24% Similarity=0.311 Sum_probs=163.9
Q ss_pred CCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccc
Q 043260 60 KGFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRG 139 (332)
Q Consensus 60 g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~ 139 (332)
|.+| .++|.++|||++|+|+++|++++++++||+|+..
T Consensus 14 ~~~~-~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------- 51 (277)
T cd08255 14 GTEK-LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------- 51 (277)
T ss_pred cCcc-CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------
Confidence 4344 3588999999999999999999999999999832
Q ss_pred cceecccccCCceeeEEecCCceEEcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHc
Q 043260 140 QKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQ 219 (332)
Q Consensus 140 ~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~ 219 (332)
+.|++|+.++.+.++++|+++++++++.+ +++.+||+++ ...++++|++++|+|+|.+|++++++|+.+
T Consensus 52 ---------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~ 120 (277)
T cd08255 52 ---------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAA 120 (277)
T ss_pred ---------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHc
Confidence 13899999999999999999999999988 7899999987 578999999999998899999999999999
Q ss_pred CCCeEEEEcCCcchHHHHHHcC-CCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEE
Q 043260 220 GAAKIIGIDKNPCRKDKGEAFG-MTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMA 298 (332)
Q Consensus 220 G~~~Vi~~~~~~~~~~~~~~lg-a~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~ 298 (332)
|+++|+++++++++.+.++++| ++.+++... ..+.+.++|++||+++....+...+++++++ |+++.
T Consensus 121 g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~ 188 (277)
T cd08255 121 GAREVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVL 188 (277)
T ss_pred CCCcEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEE
Confidence 9933999999999999999999 555554321 1234558999999999777889999999998 99999
Q ss_pred EcCCCCCcccCChHhHhc-CcEEEEeecc
Q 043260 299 IGAANEAKVPLNFPAIAL-GRNLKGTIFG 326 (332)
Q Consensus 299 ~G~~~~~~~~~~~~~~~~-~~~i~g~~~~ 326 (332)
+|..... .......+.. .+++.++...
T Consensus 189 ~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 216 (277)
T cd08255 189 VGWYGLK-PLLLGEEFHFKRLPIRSSQVY 216 (277)
T ss_pred EeccCCC-ccccHHHHHhccCeEEeeccc
Confidence 9987643 2112223333 5577776554
No 125
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.90 E-value=5.7e-24 Score=167.12 Aligned_cols=107 Identities=42% Similarity=0.646 Sum_probs=95.0
Q ss_pred CCeEEEEEeeeecCccccc-ccC-CCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEeecccCCCCCcccccCCccc
Q 043260 39 ATEVRFKMLYASICHTDVL-SSK-GFPLPLFPRVLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANL 116 (332)
Q Consensus 39 ~~eVlVkv~~~~i~~~D~~-~~g-~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~ 116 (332)
|+||||||+++|||++|++ +.+ ......+|.++|||++|+|+++|+++++|++||||++.+...|+.|.+|+.+.+++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 6899999999999999999 877 34557899999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEc
Q 043260 117 CLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKV 165 (332)
Q Consensus 117 c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~l 165 (332)
|++.... |+..+|+ |+||+.+++++++|+
T Consensus 81 c~~~~~~--g~~~~G~------------------~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVL--GLGLDGG------------------FAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEET--TTSSTCS------------------SBSEEEEEGGGEEEE
T ss_pred CCCCCEe--EcCCCCc------------------ccCeEEEehHHEEEC
Confidence 9888776 6666665 999999999999985
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.89 E-value=5.5e-21 Score=168.89 Aligned_cols=244 Identities=24% Similarity=0.315 Sum_probs=183.6
Q ss_pred EEEEecC-CCCCCeEEEEEeeeecCccccc-ccCCCCC-CCCCccccc----ceeEEEEEeCCCCCCCCCCCEEEeeccc
Q 043260 29 VEEIQVE-PPKATEVRFKMLYASICHTDVL-SSKGFPL-PLFPRVLGH----EGVGMVESIGDEVKELKEGDIVIPTFIG 101 (332)
Q Consensus 29 ~~~~~~p-~~~~~eVlVkv~~~~i~~~D~~-~~g~~~~-~~~p~v~G~----e~~G~Vv~vG~~v~~~~vGdrV~~~~~~ 101 (332)
..+.+.+ ++++++||||.+|-+..|--.. +....+. .-.|..+|- .++|+|++. +.+++++||.|+
T Consensus 26 ~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~----- 98 (343)
T KOG1196|consen 26 TTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVW----- 98 (343)
T ss_pred eeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEE-----
Confidence 3444444 4588999999999999876655 3222222 112222222 678999994 557899999998
Q ss_pred CCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCC--ceEEcCC--CCChhhh-hh
Q 043260 102 ECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDAN--YVVKVDP--SIDLSLA-GF 176 (332)
Q Consensus 102 ~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~--~v~~lP~--~~~~~~a-a~ 176 (332)
|+. +|.||.+++++ ..+++|. ++++.-. .+
T Consensus 99 ------------------------g~~---------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~ 133 (343)
T KOG1196|consen 99 ------------------------GIV---------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGL 133 (343)
T ss_pred ------------------------Eec---------------------cceEEEEecCcchhcccCCCCCccCHhhhhhc
Confidence 222 39999999764 4555543 3333222 23
Q ss_pred cccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-HcCCCeeeCCCCCCCc
Q 043260 177 LSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-AFGMTDFINPDDEPNK 254 (332)
Q Consensus 177 l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~v~~~~~~~~~ 254 (332)
+..+..|||-.+++....++|++|+|-|| |++|+++.|+|+.+|+ .|+.+..++||.++++ ++|.|..+|+++ +.
T Consensus 134 lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~--e~ 210 (343)
T KOG1196|consen 134 LGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE--ES 210 (343)
T ss_pred cCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC--cc
Confidence 56688999999999999999999999988 9999999999999999 9999999999999886 579999999998 33
Q ss_pred hHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC--CcccCC---hHhHhc-CcEEEEeecccc
Q 043260 255 SISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE--AKVPLN---FPAIAL-GRNLKGTIFGGI 328 (332)
Q Consensus 255 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~--~~~~~~---~~~~~~-~~~i~g~~~~~~ 328 (332)
+..+++++..+. |.|+-||++|+ ..+...+..++.. ||++.+|..+- ...+.. ...++. ++.|.|+.....
T Consensus 211 ~~~~aL~r~~P~-GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~ 287 (343)
T KOG1196|consen 211 DLSAALKRCFPE-GIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDY 287 (343)
T ss_pred CHHHHHHHhCCC-cceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeech
Confidence 788888887766 99999999999 5999999999998 99999998763 111211 223333 888999877665
Q ss_pred cc
Q 043260 329 KT 330 (332)
Q Consensus 329 ~~ 330 (332)
.+
T Consensus 288 ~d 289 (343)
T KOG1196|consen 288 LD 289 (343)
T ss_pred hh
Confidence 44
No 127
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.87 E-value=1.2e-21 Score=196.00 Aligned_cols=240 Identities=19% Similarity=0.265 Sum_probs=205.3
Q ss_pred eEEEEEecC--C-CCCCeEEEEEeeeecCccccc-ccCCCCCCCC-------CcccccceeEEEEEeCCCCCCCCCCCEE
Q 043260 27 WKVEEIQVE--P-PKATEVRFKMLYASICHTDVL-SSKGFPLPLF-------PRVLGHEGVGMVESIGDEVKELKEGDIV 95 (332)
Q Consensus 27 l~~~~~~~p--~-~~~~eVlVkv~~~~i~~~D~~-~~g~~~~~~~-------p~v~G~e~~G~Vv~vG~~v~~~~vGdrV 95 (332)
+++.+-|.. . ..++.=+.-|-|+.||.+|+. ..|+.+.... ..++|-||+|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 555555544 2 356777889999999999998 7887665333 35899999997 5669999
Q ss_pred EeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccCCceeeEEecCCceEEcCCCCChhhhh
Q 043260 96 IPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCSTMTEYMVVDANYVVKVDPSIDLSLAG 175 (332)
Q Consensus 96 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G~~a~~~~v~~~~v~~lP~~~~~~~aa 175 (332)
+ |+.+-.+ +++.+.++.+.+|.+|.....++|+
T Consensus 1499 M-----------------------------~mvpAks------------------LATt~l~~rd~lWevP~~WTleeAs 1531 (2376)
T KOG1202|consen 1499 M-----------------------------GMVPAKS------------------LATTVLASRDFLWEVPSKWTLEEAS 1531 (2376)
T ss_pred E-----------------------------Eeeehhh------------------hhhhhhcchhhhhhCCcccchhhcc
Confidence 8 4444333 8999999999999999999999999
Q ss_pred hcccchhhhHHHHHHhhCCCCCCEEEEEC-CChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHc----CCCeeeCCCC
Q 043260 176 FLSCGYSSGFGAAWKEFKVEKGSSVAVFG-LGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAF----GMTDFINPDD 250 (332)
Q Consensus 176 ~l~~~~~ta~~al~~~~~~~~g~~vlV~G-~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga~~v~~~~~ 250 (332)
+.|+.++|||+|+..+.++++|+++||++ +|++|++++.+|.++|+ +|+.+..++||++++.++ -...+-|.++
T Consensus 1532 tVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRd 1610 (2376)
T KOG1202|consen 1532 TVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRD 1610 (2376)
T ss_pred cCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccccc
Confidence 99999999999999999999999999995 59999999999999999 999999999999987653 3566778888
Q ss_pred CCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC-CcccCChHhHhcCcEEEEeeccccc
Q 043260 251 EPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE-AKVPLNFPAIALGRNLKGTIFGGIK 329 (332)
Q Consensus 251 ~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~ 329 (332)
.+|..-+...|+|+|+|+|+++... +-++..++||+.. |||..+|--.. +..++...-+++|.+++|...-+..
T Consensus 1611 ---tsFEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvm 1685 (2376)
T KOG1202|consen 1611 ---TSFEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVM 1685 (2376)
T ss_pred ---ccHHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhhh
Confidence 8999999999999999999999988 5899999999998 99999997665 7788888888889999999876654
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.75 E-value=1.4e-17 Score=134.58 Aligned_cols=117 Identities=25% Similarity=0.490 Sum_probs=109.9
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHH
Q 043260 207 AVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEAL 286 (332)
Q Consensus 207 ~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~ 286 (332)
++|++++|+|+.+|+ +|++++++++|+++++++|+++++++++ .++.+.+++++++.++|+||||+|++..++.++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence 589999999999996 9999999999999999999999999988 889999999999889999999999888999999
Q ss_pred HHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeecccc
Q 043260 287 EATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFGGI 328 (332)
Q Consensus 287 ~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~~~ 328 (332)
++++++ |+++.+|.......+++...+++ ++++.|+..++.
T Consensus 77 ~~l~~~-G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 118 (130)
T PF00107_consen 77 KLLRPG-GRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSP 118 (130)
T ss_dssp HHEEEE-EEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGH
T ss_pred HHhccC-CEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCH
Confidence 999998 99999999987778899998888 999999998874
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.27 E-value=6.5e-11 Score=115.52 Aligned_cols=130 Identities=18% Similarity=0.250 Sum_probs=97.5
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCee-eCCCCC----------CCchHHHHHHH
Q 043260 194 VEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDF-INPDDE----------PNKSISELVKE 262 (332)
Q Consensus 194 ~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~----------~~~~~~~~~~~ 262 (332)
..++++|+|+|+|++|+++++.|+.+|+ +|+++|.+++|++.++++|++.+ ++..++ ...++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4689999999999999999999999999 89999999999999999999854 555331 01233333333
Q ss_pred h-cCC-CCccEEEEcCCCh-----HH-HHHHHHHhccCCcEEEEEcCCCCC--cccCChHhHh--cCcEEEEeec
Q 043260 263 M-THG-TGVDYGFECTGVA-----SL-ISEALEATKLGKGKVMAIGAANEA--KVPLNFPAIA--LGRNLKGTIF 325 (332)
Q Consensus 263 ~-~~~-~g~d~vid~~g~~-----~~-~~~~~~~l~~~~G~~v~~G~~~~~--~~~~~~~~~~--~~~~i~g~~~ 325 (332)
. ... +++|+||+|++.+ .. .+++++.++++ |+++++|...+. ..+++...+. .++++.|+..
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n 314 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD 314 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC
Confidence 2 221 4799999999963 35 49999999998 999999986432 2444434444 3889999753
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.10 E-value=1e-09 Score=104.73 Aligned_cols=124 Identities=23% Similarity=0.228 Sum_probs=99.8
Q ss_pred hHHHHHHhhCC-CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHH
Q 043260 184 GFGAAWKEFKV-EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKE 262 (332)
Q Consensus 184 a~~al~~~~~~-~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~ 262 (332)
.+.++.+..++ .+|++|+|+|+|.+|+.+++.++.+|+ +|++++.++.|++.++++|++.+ + ..+.+
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v-- 255 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T--------MEEAV-- 255 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c--------HHHHH--
Confidence 34455454443 689999999999999999999999999 89999999999999999998433 1 11222
Q ss_pred hcCCCCccEEEEcCCChHHHHHH-HHHhccCCcEEEEEcCCCCCcccCChHhHhc-CcEEEEeeccc
Q 043260 263 MTHGTGVDYGFECTGVASLISEA-LEATKLGKGKVMAIGAANEAKVPLNFPAIAL-GRNLKGTIFGG 327 (332)
Q Consensus 263 ~~~~~g~d~vid~~g~~~~~~~~-~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 327 (332)
.++|+||+++|+...+... ++.++++ |+++.+|.. ..+++...+.. ++++.|+..+.
T Consensus 256 ----~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~---~~eId~~~L~~~el~i~g~~~~~ 314 (413)
T cd00401 256 ----KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQV 314 (413)
T ss_pred ----cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC---CCccCHHHHHhhccEEEEccCCc
Confidence 2589999999998888765 9999998 999999964 36788888777 88999887763
No 131
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.61 E-value=3.5e-07 Score=89.40 Aligned_cols=108 Identities=20% Similarity=0.266 Sum_probs=82.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCC-----------CCchHHHHHHHh
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDE-----------PNKSISELVKEM 263 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~-----------~~~~~~~~~~~~ 263 (332)
.++++|+|+|+|.+|++++++++.+|+ .|++++.+.++++.++++|++.+.....+ ..+++.+..+++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467899999999999999999999999 79999999999999999999764322210 112344433443
Q ss_pred cC--CCCccEEEEcC---CChH---HHHHHHHHhccCCcEEEEEcCCCC
Q 043260 264 TH--GTGVDYGFECT---GVAS---LISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 264 ~~--~~g~d~vid~~---g~~~---~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
.. .+++|+||+++ |.+. ...+.++.++++ +.+++++...+
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~G 288 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQG 288 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCC
Confidence 33 34699999999 5433 457889999998 99999987665
No 132
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.51 E-value=2e-06 Score=82.46 Aligned_cols=103 Identities=27% Similarity=0.319 Sum_probs=80.2
Q ss_pred hHHHHHHhhCCC-CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHH
Q 043260 184 GFGAAWKEFKVE-KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKE 262 (332)
Q Consensus 184 a~~al~~~~~~~-~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~ 262 (332)
+|.++.+..++. .|++|+|+|.|.+|..+++.++.+|+ +|+++++++.|...+...|++ +.+ +.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~--------l~eal-- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT--------MEEAA-- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC--------HHHHH--
Confidence 455554443544 89999999999999999999999999 899999998887766666764 221 11222
Q ss_pred hcCCCCccEEEEcCCChHHHH-HHHHHhccCCcEEEEEcCCC
Q 043260 263 MTHGTGVDYGFECTGVASLIS-EALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 263 ~~~~~g~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~G~~~ 303 (332)
.++|+||+++|+...+. ..++.++++ +.++.+|...
T Consensus 266 ----~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 ----ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred ----hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 16899999999977776 688889987 8999998765
No 133
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.43 E-value=3.7e-08 Score=95.08 Aligned_cols=180 Identities=16% Similarity=0.184 Sum_probs=114.8
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccC
Q 043260 70 VLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCS 149 (332)
Q Consensus 70 v~G~e~~G~Vv~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G 149 (332)
.-|.|+++.+.+|++++++ +|++-+.. ||.|.+| .+.|...... |...++
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~--g~~l~~------------------ 138 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTV--GKVLER------------------ 138 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCc--hHHHHH------------------
Confidence 4589999999999999876 55555555 7877777 4445544433 333333
Q ss_pred CceeeEEecCCceEE---c-CCCCChhhhhhcccchhhhHHHH---HHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCC
Q 043260 150 TMTEYMVVDANYVVK---V-DPSIDLSLAGFLSCGYSSGFGAA---WKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAA 222 (332)
Q Consensus 150 ~~a~~~~v~~~~v~~---l-P~~~~~~~aa~l~~~~~ta~~al---~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~ 222 (332)
.|++++.++. .+.. + +..++ .++.++ .+..+..++++|+|+|+|.+|..+++.++..|+.
T Consensus 139 lf~~a~~~~k-~vr~~t~i~~~~vS------------v~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~ 205 (417)
T TIGR01035 139 LFQKAFSVGK-RVRTETDISAGAVS------------ISSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVG 205 (417)
T ss_pred HHHHHHHHhh-hhhhhcCCCCCCcC------------HHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCC
Confidence 4888887765 3332 2 22222 222222 1333446789999999999999999999999966
Q ss_pred eEEEEcCCcchHH-HHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHH--HHHHHHhcc---CCcEE
Q 043260 223 KIIGIDKNPCRKD-KGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLI--SEALEATKL---GKGKV 296 (332)
Q Consensus 223 ~Vi~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~--~~~~~~l~~---~~G~~ 296 (332)
+|++++++.++.+ +++++|.. .+.. .+..+.+ .++|+||+|++++..+ ...++.... ..-.+
T Consensus 206 ~V~v~~rs~~ra~~la~~~g~~-~i~~-----~~l~~~l------~~aDvVi~aT~s~~~ii~~e~l~~~~~~~~~~~~v 273 (417)
T TIGR01035 206 KILIANRTYERAEDLAKELGGE-AVKF-----EDLEEYL------AEADIVISSTGAPHPIVSKEDVERALRERTRPLFI 273 (417)
T ss_pred EEEEEeCCHHHHHHHHHHcCCe-EeeH-----HHHHHHH------hhCCEEEECCCCCCceEcHHHHHHHHhcCCCCeEE
Confidence 9999999988754 67777764 2222 2222222 2589999999876443 122333222 10267
Q ss_pred EEEcCCCC
Q 043260 297 MAIGAANE 304 (332)
Q Consensus 297 v~~G~~~~ 304 (332)
+.++.+.+
T Consensus 274 iDla~Prd 281 (417)
T TIGR01035 274 IDIAVPRD 281 (417)
T ss_pred EEeCCCCC
Confidence 78887654
No 134
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.40 E-value=6.7e-06 Score=78.51 Aligned_cols=111 Identities=27% Similarity=0.354 Sum_probs=82.9
Q ss_pred hHHHHHHhhC-CCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHH
Q 043260 184 GFGAAWKEFK-VEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKE 262 (332)
Q Consensus 184 a~~al~~~~~-~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~ 262 (332)
++.++.+..+ ...|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.|...+...|+. +.+ ..+.+
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal-- 248 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAA-- 248 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC--------HHHHH--
Confidence 3444444433 3689999999999999999999999999 899999988887777777763 321 11222
Q ss_pred hcCCCCccEEEEcCCChHHHH-HHHHHhccCCcEEEEEcCCCCCcccCChHhH
Q 043260 263 MTHGTGVDYGFECTGVASLIS-EALEATKLGKGKVMAIGAANEAKVPLNFPAI 314 (332)
Q Consensus 263 ~~~~~g~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~ 314 (332)
.+.|+||+++|+...+. ..+..++++ +.++.+|... ..++...+
T Consensus 249 ----~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~---~eId~~aL 293 (406)
T TIGR00936 249 ----KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD---VEIDVKAL 293 (406)
T ss_pred ----hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC---ceeCHHHH
Confidence 25799999999987776 488888987 8999988764 34555544
No 135
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.30 E-value=3.5e-06 Score=78.32 Aligned_cols=131 Identities=17% Similarity=0.173 Sum_probs=91.5
Q ss_pred CceEEcCCCCChhhhhhcccchhhhHHHHHHhhCC----CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchH-
Q 043260 160 NYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKV----EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRK- 234 (332)
Q Consensus 160 ~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~----~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~- 234 (332)
...+++|+.+..+.++... +.+++++++. .+.. .++++|+|+|+|.+|..+++.++..|..+|++++++.++.
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~-~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVE-LAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHH-HHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 4677788999888887765 7778888763 3332 4789999999999999999999988877899999998775
Q ss_pred HHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHH---HHHHHHHhccCCcEEEEEcCCCC
Q 043260 235 DKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASL---ISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 235 ~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~---~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
++++++|+. +++. +++.+.+ ..+|+||.+++.+.. +...++.....+-.++.++.+..
T Consensus 217 ~la~~~g~~-~~~~-----~~~~~~l------~~aDvVi~at~~~~~~~~~~~~~~~~~~~~~~viDlavPrd 277 (311)
T cd05213 217 ELAKELGGN-AVPL-----DELLELL------NEADVVISATGAPHYAKIVERAMKKRSGKPRLIVDLAVPRD 277 (311)
T ss_pred HHHHHcCCe-EEeH-----HHHHHHH------hcCCEEEECCCCCchHHHHHHHHhhCCCCCeEEEEeCCCCC
Confidence 677888873 3322 2222222 148999999998654 23333332212135667887654
No 136
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.27 E-value=1.8e-05 Score=72.97 Aligned_cols=95 Identities=18% Similarity=0.290 Sum_probs=75.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFEC 275 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~ 275 (332)
.+++++|+|.|.+|+.+++.++.+|+ +|++++++.++++.++++|+..+ .. .+ +.+... ++|+||++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~-----~~----l~~~l~--~aDiVI~t 217 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL-----SE----LAEEVG--KIDIIFNT 217 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH-----HH----HHHHhC--CCCEEEEC
Confidence 68999999999999999999999998 99999999988888888887533 11 12 223322 59999999
Q ss_pred CCChHHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 276 TGVASLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 276 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
++..-.....++.++++ +.++.++...+
T Consensus 218 ~p~~~i~~~~l~~~~~g-~vIIDla~~pg 245 (296)
T PRK08306 218 IPALVLTKEVLSKMPPE-ALIIDLASKPG 245 (296)
T ss_pred CChhhhhHHHHHcCCCC-cEEEEEccCCC
Confidence 88743346777889998 99999988764
No 137
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.26 E-value=1.7e-05 Score=71.40 Aligned_cols=132 Identities=17% Similarity=0.190 Sum_probs=86.6
Q ss_pred ceeeEEecCCceEEcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCC
Q 043260 151 MTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKN 230 (332)
Q Consensus 151 ~a~~~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~ 230 (332)
|.+|.. +...++++++++++..+.- +.+. .....+. ....++++||-+|+|. |.+++.+++ .|..+|+++|.+
T Consensus 79 ~~~~~~-~~~~~i~i~p~~afgtg~h-~tt~-~~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis 151 (250)
T PRK00517 79 WEDPPD-PDEINIELDPGMAFGTGTH-PTTR-LCLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDID 151 (250)
T ss_pred CcCCCC-CCeEEEEECCCCccCCCCC-HHHH-HHHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECC
Confidence 666644 6778899999998876642 2111 1222221 1357899999999987 887776544 677579999999
Q ss_pred cchHHHHHHc----CCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCCh---HHHHHHHHHhccCCcEEEEEcCCC
Q 043260 231 PCRKDKGEAF----GMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVA---SLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 231 ~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
+...+.+++. +....+... .+...||+|+.+.... ..+.++.+.|+++ |++++.|...
T Consensus 152 ~~~l~~A~~n~~~~~~~~~~~~~--------------~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~~ 216 (250)
T PRK00517 152 PQAVEAARENAELNGVELNVYLP--------------QGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGILE 216 (250)
T ss_pred HHHHHHHHHHHHHcCCCceEEEc--------------cCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECcH
Confidence 9888776553 221101000 0111599999876543 2456888899998 9999998765
Q ss_pred C
Q 043260 304 E 304 (332)
Q Consensus 304 ~ 304 (332)
.
T Consensus 217 ~ 217 (250)
T PRK00517 217 E 217 (250)
T ss_pred h
Confidence 3
No 138
>PLN02494 adenosylhomocysteinase
Probab=98.24 E-value=1.4e-05 Score=77.09 Aligned_cols=102 Identities=21% Similarity=0.281 Sum_probs=80.2
Q ss_pred HHHHHHhhCC-CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHh
Q 043260 185 FGAAWKEFKV-EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEM 263 (332)
Q Consensus 185 ~~al~~~~~~-~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~ 263 (332)
+.++.+..++ -.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+..+ + ..+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv-~--------leEal~-- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL-T--------LEDVVS-- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec-c--------HHHHHh--
Confidence 4445454444 679999999999999999999999999 89999999888777777777522 1 222221
Q ss_pred cCCCCccEEEEcCCChHHH-HHHHHHhccCCcEEEEEcCCC
Q 043260 264 THGTGVDYGFECTGVASLI-SEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 264 ~~~~g~d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~G~~~ 303 (332)
.+|+||+++|+...+ ...++.++++ +.++.+|...
T Consensus 309 ----~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~~ 344 (477)
T PLN02494 309 ----EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHFD 344 (477)
T ss_pred ----hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence 479999999987654 7899999998 9999999854
No 139
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.07 E-value=1.4e-05 Score=72.81 Aligned_cols=103 Identities=23% Similarity=0.297 Sum_probs=72.9
Q ss_pred hhCCCCCCEEEEECCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHHc----CCCeeeCCCCCCCchHHHHHHHhc-
Q 043260 191 EFKVEKGSSVAVFGLGAVGLGVMDRARIQGA-AKIIGIDKNPCRKDKGEAF----GMTDFINPDDEPNKSISELVKEMT- 264 (332)
Q Consensus 191 ~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~-~~Vi~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~~~~~~- 264 (332)
.+.+++|++||.+|+|. |..+.++++..|. .+|+++|.+++.++.+++. |.+.+.... .+ +.++.
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~----~d----~~~l~~ 142 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL----GE----IEALPV 142 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE----cc----hhhCCC
Confidence 35788999999999988 8888888888775 3799999999998887763 332221110 11 22221
Q ss_pred CCCCccEEEEcC------CChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 265 HGTGVDYGFECT------GVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 265 ~~~g~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
....||+|+... .....+.++.+.|+++ |++++.+...
T Consensus 143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~ 186 (272)
T PRK11873 143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVL 186 (272)
T ss_pred CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeec
Confidence 223799999654 2235789999999998 9999977543
No 140
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.94 E-value=0.0001 Score=67.63 Aligned_cols=94 Identities=16% Similarity=0.277 Sum_probs=71.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFEC 275 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~ 275 (332)
.|++++|+|.|.+|.+++..++.+|+ +|++++++.++.+.+.++|...+ .. .+ +.+... .+|+||++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~-----~~----l~~~l~--~aDiVint 216 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL-----NK----LEEKVA--EIDIVINT 216 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH-----HH----HHHHhc--cCCEEEEC
Confidence 57899999999999999999999998 99999999888777777775322 11 22 223322 58999999
Q ss_pred CCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 276 TGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 276 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
++..-.-...++.++++ ..++.++...
T Consensus 217 ~P~~ii~~~~l~~~k~~-aliIDlas~P 243 (287)
T TIGR02853 217 IPALVLTADVLSKLPKH-AVIIDLASKP 243 (287)
T ss_pred CChHHhCHHHHhcCCCC-eEEEEeCcCC
Confidence 97642224677888887 8899998765
No 141
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.94 E-value=8.4e-06 Score=81.95 Aligned_cols=80 Identities=19% Similarity=0.232 Sum_probs=59.0
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCC---------------------cchHHHHHHcCCCeeeCCCCC
Q 043260 193 KVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKN---------------------PCRKDKGEAFGMTDFINPDDE 251 (332)
Q Consensus 193 ~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~---------------------~~~~~~~~~lga~~v~~~~~~ 251 (332)
..++|++|+|+|+|+.|+++++.++..|+ +|++++.. +.+++.++++|++..++....
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 36789999999999999999999999999 89999853 345677888998877664320
Q ss_pred CCchHHHHHHHhcCCCCccEEEEcCCCh
Q 043260 252 PNKSISELVKEMTHGTGVDYGFECTGVA 279 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~d~vid~~g~~ 279 (332)
..... +.+. .++|+||+++|..
T Consensus 212 ~~~~~-~~~~-----~~~D~Vi~AtG~~ 233 (564)
T PRK12771 212 EDITL-EQLE-----GEFDAVFVAIGAQ 233 (564)
T ss_pred CcCCH-HHHH-----hhCCEEEEeeCCC
Confidence 00111 1111 2699999999975
No 142
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.90 E-value=0.00014 Score=70.56 Aligned_cols=93 Identities=25% Similarity=0.334 Sum_probs=73.9
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEE
Q 043260 194 VEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGF 273 (332)
Q Consensus 194 ~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vi 273 (332)
.-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+..+ ++.+.+ ..+|+|+
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~---------~leell------~~ADIVI 314 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV---------TLEDVV------ETADIFV 314 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec---------cHHHHH------hcCCEEE
Confidence 4579999999999999999999999999 89999888777655555665321 122222 2589999
Q ss_pred EcCCChHHHH-HHHHHhccCCcEEEEEcCCC
Q 043260 274 ECTGVASLIS-EALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 274 d~~g~~~~~~-~~~~~l~~~~G~~v~~G~~~ 303 (332)
.++|+...+. ..++.++++ +.++.+|-..
T Consensus 315 ~atGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 315 TATGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred ECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 9999877774 899999998 9999998764
No 143
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.89 E-value=4.1e-05 Score=74.18 Aligned_cols=184 Identities=17% Similarity=0.148 Sum_probs=107.8
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEeecccCCCCCcccccCCcccCCCCccccccccCCCCCcccccccceecccccC
Q 043260 70 VLGHEGVGMVESIGDEVKELKEGDIVIPTFIGECRECENCTSEMANLCLKYPFTFHGLMPDGSSRMSIRGQKLYHIFTCS 149 (332)
Q Consensus 70 v~G~e~~G~Vv~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~G 149 (332)
.-|||+++.+.+|++++++.-+|+.-+ || +|+..+ +.|...... |...+ +
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qI------lg---Qvk~a~-~~a~~~g~~--g~~l~------------------~ 140 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQI------LG---QVKDAY-ALAQEAGTV--GTILN------------------R 140 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHH------HH---HHHHHH-HHHHHcCCc--hHHHH------------------H
Confidence 459999999999999988755555432 22 333211 112221111 11111 1
Q ss_pred CceeeEEecCCceEEcCCCCChhhhhhcccchhhhHHHHHHhhC---CCCCCEEEEECCChHHHHHHHHHHHcCCCeEEE
Q 043260 150 TMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFK---VEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIG 226 (332)
Q Consensus 150 ~~a~~~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~---~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~ 226 (332)
.|++.+ ++|+.+..+.+. ...+.+++++++..... -.++++|+|+|+|.+|.++++.++..|+.+|++
T Consensus 141 lf~~a~--------~~~k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v 211 (423)
T PRK00045 141 LFQKAF--------SVAKRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITV 211 (423)
T ss_pred HHHHHH--------HHHhhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEE
Confidence 244433 334444333222 22356677777633222 257899999999999999999999999878999
Q ss_pred EcCCcchHH-HHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHH--HHHHHH-hcc--C-CcEEEEE
Q 043260 227 IDKNPCRKD-KGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLI--SEALEA-TKL--G-KGKVMAI 299 (332)
Q Consensus 227 ~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~--~~~~~~-l~~--~-~G~~v~~ 299 (332)
++++.++.+ +++++|.+ +++. .+. .+.. .++|+||+|++++..+ ...++. +.. + .-.++.+
T Consensus 212 ~~r~~~ra~~la~~~g~~-~~~~-----~~~----~~~l--~~aDvVI~aT~s~~~~i~~~~l~~~~~~~~~~~~vviDl 279 (423)
T PRK00045 212 ANRTLERAEELAEEFGGE-AIPL-----DEL----PEAL--AEADIVISSTGAPHPIIGKGMVERALKARRHRPLLLVDL 279 (423)
T ss_pred EeCCHHHHHHHHHHcCCc-EeeH-----HHH----HHHh--ccCCEEEECCCCCCcEEcHHHHHHHHhhccCCCeEEEEe
Confidence 999988855 77788864 3322 222 2222 2589999999986433 122222 211 1 1357777
Q ss_pred cCCCC
Q 043260 300 GAANE 304 (332)
Q Consensus 300 G~~~~ 304 (332)
+.+.+
T Consensus 280 a~Prd 284 (423)
T PRK00045 280 AVPRD 284 (423)
T ss_pred CCCCC
Confidence 77654
No 144
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.88 E-value=0.00012 Score=69.54 Aligned_cols=99 Identities=16% Similarity=0.184 Sum_probs=70.5
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-HcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEE
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-AFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFE 274 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid 274 (332)
++.+|+|+|+|.+|+.+++.++.+|+ +|++++++.++++.+. .++........+ .++ +.+... .+|+||+
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~--~~~----l~~~l~--~aDvVI~ 236 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN--AYE----IEDAVK--RADLLIG 236 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC--HHH----HHHHHc--cCCEEEE
Confidence 34569999999999999999999999 8999999988877664 455432222221 122 333322 5899999
Q ss_pred cCC---C--hH-HHHHHHHHhccCCcEEEEEcCCCC
Q 043260 275 CTG---V--AS-LISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 275 ~~g---~--~~-~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
+++ . +. ...+.++.++++ +.++.++...+
T Consensus 237 a~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 237 AVLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred ccccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 973 2 21 136788889998 99999987655
No 145
>PRK08324 short chain dehydrogenase; Validated
Probab=97.82 E-value=0.0002 Score=73.64 Aligned_cols=140 Identities=20% Similarity=0.234 Sum_probs=88.0
Q ss_pred CceeeEEecCCceEEcCCCCChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEc
Q 043260 150 TMTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGID 228 (332)
Q Consensus 150 ~~a~~~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~ 228 (332)
++++|..++...++.+ +..+.+++..-..+ .....+|+++||+|+ |++|..+++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 3667777776666666 55666666421100 122346899999997 9999999999999999 899999
Q ss_pred CCcchHHHH-HHcCC--C-ee--eCCCCCCCchHHHHHHHhcC-CCCccEEEEcCCCh----------------------
Q 043260 229 KNPCRKDKG-EAFGM--T-DF--INPDDEPNKSISELVKEMTH-GTGVDYGFECTGVA---------------------- 279 (332)
Q Consensus 229 ~~~~~~~~~-~~lga--~-~v--~~~~~~~~~~~~~~~~~~~~-~~g~d~vid~~g~~---------------------- 279 (332)
++.++.+.+ ++++. . .. .|..+ .+++.+.+.+... ..++|+||+++|..
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 998876644 33443 1 11 23333 2333333333211 12699999999821
Q ss_pred ---HHHHHHHHHhcc---CCcEEEEEcCCCC
Q 043260 280 ---SLISEALEATKL---GKGKVMAIGAANE 304 (332)
Q Consensus 280 ---~~~~~~~~~l~~---~~G~~v~~G~~~~ 304 (332)
..++.+++.+++ + |+++++++...
T Consensus 532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~~~ 561 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLG-GSIVFIASKNA 561 (681)
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEECCccc
Confidence 123455666666 5 89999987654
No 146
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.80 E-value=0.00017 Score=66.30 Aligned_cols=99 Identities=19% Similarity=0.194 Sum_probs=66.9
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHc----CCC-eeeCCCCCCCchHHHHHHHhcCCCC
Q 043260 194 VEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAF----GMT-DFINPDDEPNKSISELVKEMTHGTG 268 (332)
Q Consensus 194 ~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga~-~v~~~~~~~~~~~~~~~~~~~~~~g 268 (332)
..++++||-+|+|. |.+++.+++ .|..+|+++|.++...+.+++. +.. .+.... .+ ..... ..+
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~----~~----~~~~~-~~~ 225 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL----IY----LEQPI-EGK 225 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe----cc----ccccc-CCC
Confidence 46789999999988 877776665 5766999999999887766552 221 111111 00 11112 237
Q ss_pred ccEEEEcCCCh---HHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 269 VDYGFECTGVA---SLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 269 ~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
||+|+.+.... ..+..+.+.|+++ |.+++.|....
T Consensus 226 fDlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~~~ 263 (288)
T TIGR00406 226 ADVIVANILAEVIKELYPQFSRLVKPG-GWLILSGILET 263 (288)
T ss_pred ceEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCcHh
Confidence 99999876543 3466788999998 99999887653
No 147
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.74 E-value=0.00012 Score=59.54 Aligned_cols=100 Identities=22% Similarity=0.284 Sum_probs=65.5
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHH-HHHcCCC--eeeCCCCCCCchHHHHHHHhcCCCCcc
Q 043260 194 VEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDK-GEAFGMT--DFINPDDEPNKSISELVKEMTHGTGVD 270 (332)
Q Consensus 194 ~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~-~~~lga~--~v~~~~~~~~~~~~~~~~~~~~~~g~d 270 (332)
--.+.+++|+|+|++|.+++..+...|+++|+++.|+.+|.+. +++++.. .++... ++.+.+ ..+|
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~-----~~~~~~------~~~D 77 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE-----DLEEAL------QEAD 77 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG-----GHCHHH------HTES
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH-----HHHHHH------hhCC
Confidence 3468999999999999999999999999889999999988764 4566433 233332 222222 1589
Q ss_pred EEEEcCCChHH--HHHHHHHhccCCcEEEEEcCCCC
Q 043260 271 YGFECTGVASL--ISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 271 ~vid~~g~~~~--~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
+||++++.+.. ....++...+..+.++.++.+..
T Consensus 78 ivI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr~ 113 (135)
T PF01488_consen 78 IVINATPSGMPIITEEMLKKASKKLRLVIDLAVPRD 113 (135)
T ss_dssp EEEE-SSTTSTSSTHHHHTTTCHHCSEEEES-SS-S
T ss_pred eEEEecCCCCcccCHHHHHHHHhhhhceeccccCCC
Confidence 99999987522 12333322221147888887654
No 148
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.73 E-value=0.00024 Score=61.33 Aligned_cols=118 Identities=16% Similarity=0.225 Sum_probs=82.2
Q ss_pred ChhhhhhcccchhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcch----HHHHHHcCCCee
Q 043260 170 DLSLAGFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCR----KDKGEAFGMTDF 245 (332)
Q Consensus 170 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~----~~~~~~lga~~v 245 (332)
+....-++..+...|. +.....+++|++||=+|+|. |..++-+++..| +|+.+++.++= ++.++.+|.+.|
T Consensus 48 pi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV 122 (209)
T COG2518 48 PIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENV 122 (209)
T ss_pred cCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCce
Confidence 3334444444545554 34778999999999999987 999999999887 89999988762 334567887544
Q ss_pred eCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEE-c
Q 043260 246 INPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAI-G 300 (332)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~-G 300 (332)
..... +. -..+.....||.|+-+.+.+..-...++.|+++ |+++.- |
T Consensus 123 ~v~~g---DG----~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG 170 (209)
T COG2518 123 TVRHG---DG----SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG 170 (209)
T ss_pred EEEEC---Cc----ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence 32222 11 112223346999999888876668999999998 887754 5
No 149
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.72 E-value=0.00018 Score=63.41 Aligned_cols=80 Identities=16% Similarity=0.290 Sum_probs=59.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHH-HHHcCCC----eeeCCCCCCCchHHHHHHHhcCCCC-
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDK-GEAFGMT----DFINPDDEPNKSISELVKEMTHGTG- 268 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~-~~~lga~----~v~~~~~~~~~~~~~~~~~~~~~~g- 268 (332)
+++.++|+|+ +++|.+.++.+...|+ +|+++.|+.+|++. +.+++.. ..+|..+ .++..+.+..+....+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence 4578899999 9999999999999999 99999999999975 4667732 2344444 3344445554444433
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
+|+++++.|.
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 8999999885
No 150
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.65 E-value=0.00094 Score=60.16 Aligned_cols=81 Identities=15% Similarity=0.293 Sum_probs=57.3
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcC----CC-eee--CCCCCCCchHHHHHHH-hc
Q 043260 195 EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFG----MT-DFI--NPDDEPNKSISELVKE-MT 264 (332)
Q Consensus 195 ~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lg----a~-~v~--~~~~~~~~~~~~~~~~-~~ 264 (332)
..+.++||+|| +++|...+..+...|. +++.+.|+++|++.+ +++. .. +++ |..+ +++ .+.+.+ +.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~--~~~-~~~l~~~l~ 79 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD--PEA-LERLEDELK 79 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC--hhH-HHHHHHHHH
Confidence 46789999999 9999999999999999 999999999998754 3332 22 233 3333 233 333333 22
Q ss_pred -CCCCccEEEEcCCCh
Q 043260 265 -HGTGVDYGFECTGVA 279 (332)
Q Consensus 265 -~~~g~d~vid~~g~~ 279 (332)
.+..+|+.++++|-.
T Consensus 80 ~~~~~IdvLVNNAG~g 95 (265)
T COG0300 80 ERGGPIDVLVNNAGFG 95 (265)
T ss_pred hcCCcccEEEECCCcC
Confidence 223689999999953
No 151
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.60 E-value=0.0032 Score=57.99 Aligned_cols=139 Identities=14% Similarity=0.126 Sum_probs=88.0
Q ss_pred ceeeEEecCCceEEcCCCCChhhhhhcccchhhhHHHHHHhhC---CCCCCEEEEECC-ChHHHHHHHHHH-HcCCCeEE
Q 043260 151 MTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWKEFK---VEKGSSVAVFGL-GAVGLGVMDRAR-IQGAAKII 225 (332)
Q Consensus 151 ~a~~~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~---~~~g~~vlV~G~-g~vG~~~~~la~-~~G~~~Vi 225 (332)
|-+|.++..+..+ .+.....++.+-+ -+.|.|- |.+... .-..+.|+|.+| +-.++.++..++ ..+..++|
T Consensus 91 YN~Y~r~~~d~~y--~~~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~v 166 (314)
T PF11017_consen 91 YNQYLRVSADPAY--DPEREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVV 166 (314)
T ss_pred hhceeecCCCccc--CcchhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEE
Confidence 6677777655443 1112222222222 3445553 433222 223356777777 888888888888 45555888
Q ss_pred EEcCCcchHHHHHHcCC-CeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 226 GIDKNPCRKDKGEAFGM-TDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 226 ~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
.+++ +...+..+.+|+ |+|+.|++ +..+... ..-+++|..|+...+..+.+.++..--..+.+|...-
T Consensus 167 glTS-~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~-~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 167 GLTS-ARNVAFVESLGCYDEVLTYDD---------IDSLDAP-QPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred EEec-CcchhhhhccCCceEEeehhh---------hhhccCC-CCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 8864 556678899996 78888865 4444333 5689999999988888888888876234667776543
No 152
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.58 E-value=0.00078 Score=61.18 Aligned_cols=111 Identities=21% Similarity=0.355 Sum_probs=75.8
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe-ee----CCCCCCCchHHHHH---H
Q 043260 195 EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD-FI----NPDDEPNKSISELV---K 261 (332)
Q Consensus 195 ~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v~----~~~~~~~~~~~~~~---~ 261 (332)
-.+++|+|+|| +++|.+++.-....|+ +++.+.+..++++.. ++.+... ++ |..+ .++..+.+ .
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~--~~~~~~~~~~~~ 86 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD--EESVKKFVEWAI 86 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC--HHHHHHHHHHHH
Confidence 46788999999 9999998888888999 888888888877655 4445433 32 2222 23333333 2
Q ss_pred HhcCCCCccEEEEcCCCh-------------------------HHHHHHHHHhccCC-cEEEEEcCCCC-CcccCC
Q 043260 262 EMTHGTGVDYGFECTGVA-------------------------SLISEALEATKLGK-GKVMAIGAANE-AKVPLN 310 (332)
Q Consensus 262 ~~~~~~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~-G~~v~~G~~~~-~~~~~~ 310 (332)
... + ++|+.+++.|-. .....++..+++.+ |+++.+++..+ ...++.
T Consensus 87 ~~f-g-~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~ 160 (282)
T KOG1205|consen 87 RHF-G-RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR 160 (282)
T ss_pred Hhc-C-CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc
Confidence 222 2 699999998853 12345666777765 99999999887 555554
No 153
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0019 Score=58.74 Aligned_cols=105 Identities=16% Similarity=0.247 Sum_probs=70.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCee-eCCCCCCCchHHHHHHHh---cCCCCcc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDF-INPDDEPNKSISELVKEM---THGTGVD 270 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~~~~~---~~~~g~d 270 (332)
.++++||+|+ |++|..+++.+...|. +|++++++.++++.+.+.+...+ .|..+ .+++.+.+.+. .++ ..|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g-~id 78 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGG-RLD 78 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCC-Ccc
Confidence 4678999998 9999999999988999 99999999888877766665433 24333 23333333322 223 689
Q ss_pred EEEEcCCChH-------------------------HHHHHHHHhccC-CcEEEEEcCCCC
Q 043260 271 YGFECTGVAS-------------------------LISEALEATKLG-KGKVMAIGAANE 304 (332)
Q Consensus 271 ~vid~~g~~~-------------------------~~~~~~~~l~~~-~G~~v~~G~~~~ 304 (332)
++|++.|... ....++..+.+. .|+++.+++..+
T Consensus 79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~ 138 (277)
T PRK05993 79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILG 138 (277)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhh
Confidence 9999876310 023455555443 278999887543
No 154
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.43 E-value=0.00091 Score=57.33 Aligned_cols=80 Identities=19% Similarity=0.283 Sum_probs=58.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCC---CeeeCCCCC-CCchHHHHHHHhcCCCCcc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGM---TDFINPDDE-PNKSISELVKEMTHGTGVD 270 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga---~~v~~~~~~-~~~~~~~~~~~~~~~~g~d 270 (332)
.|-+|||.|+ +++|+..++-...+|- +||++.|++++++.++..-. ..+.|..+. .-..+.+++.+..+ ..+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P--~lN 80 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP--NLN 80 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC--chh
Confidence 5789999976 9999999999999998 99999999999998877542 345555540 11124455544443 479
Q ss_pred EEEEcCCC
Q 043260 271 YGFECTGV 278 (332)
Q Consensus 271 ~vid~~g~ 278 (332)
++++++|-
T Consensus 81 vliNNAGI 88 (245)
T COG3967 81 VLINNAGI 88 (245)
T ss_pred eeeecccc
Confidence 99999884
No 155
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.41 E-value=0.0028 Score=55.88 Aligned_cols=107 Identities=18% Similarity=0.259 Sum_probs=68.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHc---CCCeeeCCCCCCCchHHHHHHHhcC-CCCc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAF---GMTDFINPDDEPNKSISELVKEMTH-GTGV 269 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~l---ga~~v~~~~~~~~~~~~~~~~~~~~-~~g~ 269 (332)
++++++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +++ +....+..+-...++..+.+.+... -.++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999998 9999999999999999 999999988877554 222 2222332221112333333332211 1258
Q ss_pred cEEEEcCCCh-----------------------HHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 270 DYGFECTGVA-----------------------SLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 270 d~vid~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
|.++.+.+.. ..++..+..++++ |+++.+++..+
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~~ 139 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMSG 139 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecchh
Confidence 9999988742 1134555666777 89999987643
No 156
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.40 E-value=0.003 Score=52.53 Aligned_cols=111 Identities=23% Similarity=0.329 Sum_probs=70.4
Q ss_pred HHHHHhhC-CCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhc
Q 043260 186 GAAWKEFK-VEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMT 264 (332)
Q Consensus 186 ~al~~~~~-~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~ 264 (332)
.++.+..+ +-.|++++|+|-|-+|...++.++.+|+ +|++++.++.+.-.+..-|.+ +. .+. +..
T Consensus 11 d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~--------~~~----~a~ 76 (162)
T PF00670_consen 11 DGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM--------TLE----EAL 76 (162)
T ss_dssp HHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE---------HH----HHT
T ss_pred HHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec--------CHH----HHH
Confidence 33444434 4688999999999999999999999999 999999998776666556653 22 122 222
Q ss_pred CCCCccEEEEcCCChHHH-HHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc
Q 043260 265 HGTGVDYGFECTGVASLI-SEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL 316 (332)
Q Consensus 265 ~~~g~d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~ 316 (332)
..+|++|.++|..+.+ .+-++.++++ ..+..+|.. ..+++...+..
T Consensus 77 --~~adi~vtaTG~~~vi~~e~~~~mkdg-ail~n~Gh~---d~Eid~~~L~~ 123 (162)
T PF00670_consen 77 --RDADIFVTATGNKDVITGEHFRQMKDG-AILANAGHF---DVEIDVDALEA 123 (162)
T ss_dssp --TT-SEEEE-SSSSSSB-HHHHHHS-TT-EEEEESSSS---TTSBTHHHHHT
T ss_pred --hhCCEEEECCCCccccCHHHHHHhcCC-eEEeccCcC---ceeEeeccccc
Confidence 2479999999987654 5778889886 555555653 36677666554
No 157
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.39 E-value=0.0024 Score=55.27 Aligned_cols=103 Identities=20% Similarity=0.363 Sum_probs=71.1
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHH----HcC-CCeeeCCCCCCCchHHHHHHHh
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGA-AKIIGIDKNPCRKDKGE----AFG-MTDFINPDDEPNKSISELVKEM 263 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lg-a~~v~~~~~~~~~~~~~~~~~~ 263 (332)
....+.++++||.+|+|. |.+++.+++..+. .+|+.+|.+++..+.++ ++| .+.+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFTI 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhhc
Confidence 456788999999999988 8888899887652 48999999998877654 456 33322111 1222223332
Q ss_pred cCCCCccEEEEcCCC---hHHHHHHHHHhccCCcEEEEEc
Q 043260 264 THGTGVDYGFECTGV---ASLISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 264 ~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G 300 (332)
. ..+|.||...+. ...+..+.+.|+++ |+++..-
T Consensus 109 ~--~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~ 145 (198)
T PRK00377 109 N--EKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVIDA 145 (198)
T ss_pred C--CCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEEe
Confidence 2 269999986553 34678888999998 9988633
No 158
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.34 E-value=0.0019 Score=59.04 Aligned_cols=139 Identities=18% Similarity=0.274 Sum_probs=84.1
Q ss_pred ceeeEEecCCceEEcCCCCChhhhhhcccchhhhHHHHHH-hhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcC
Q 043260 151 MTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWK-EFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDK 229 (332)
Q Consensus 151 ~a~~~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~-~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~ 229 (332)
|.+|..-.....+++.+++.|-. .....|++- +.. ....++|++||=+|+|. |.+++..++ +|+.+|+++|.
T Consensus 121 w~~~~~~~~~~~i~lDPGlAFGT----G~HpTT~lc-L~~Le~~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~Di 193 (300)
T COG2264 121 WREYPEPSDELNIELDPGLAFGT----GTHPTTSLC-LEALEKLLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDI 193 (300)
T ss_pred CccCCCCCCceEEEEccccccCC----CCChhHHHH-HHHHHHhhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecC
Confidence 55543332467778877775532 223334432 221 22457999999999976 776665555 78878999999
Q ss_pred CcchHHHHHH----cCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCCh---HHHHHHHHHhccCCcEEEEEcCC
Q 043260 230 NPCRKDKGEA----FGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVA---SLISEALEATKLGKGKVMAIGAA 302 (332)
Q Consensus 230 ~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~G~~ 302 (332)
++-..+.+++ -+......... ... ..... +..||+|+-+.=.. ....+....++++ |++++.|..
T Consensus 194 Dp~AV~aa~eNa~~N~v~~~~~~~~---~~~---~~~~~-~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl 265 (300)
T COG2264 194 DPQAVEAARENARLNGVELLVQAKG---FLL---LEVPE-NGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGIL 265 (300)
T ss_pred CHHHHHHHHHHHHHcCCchhhhccc---ccc---hhhcc-cCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeeh
Confidence 9876665543 23321100000 000 11111 23799999877442 2346788899998 999999987
Q ss_pred CC
Q 043260 303 NE 304 (332)
Q Consensus 303 ~~ 304 (332)
..
T Consensus 266 ~~ 267 (300)
T COG2264 266 ED 267 (300)
T ss_pred Hh
Confidence 65
No 159
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.34 E-value=0.0014 Score=62.69 Aligned_cols=109 Identities=12% Similarity=0.122 Sum_probs=74.8
Q ss_pred chhhhHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHH
Q 043260 180 GYSSGFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISEL 259 (332)
Q Consensus 180 ~~~ta~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 259 (332)
+-...+..+.+..++++|++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++.....-+.... .++
T Consensus 151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~--- 222 (383)
T PRK11705 151 AQEAKLDLICRKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDY--- 222 (383)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cch---
Confidence 3334455565777889999999999964 7778888888888 9999999999999887653221111111 111
Q ss_pred HHHhcCCCCccEEEEc-----CCC---hHHHHHHHHHhccCCcEEEEEc
Q 043260 260 VKEMTHGTGVDYGFEC-----TGV---ASLISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 260 ~~~~~~~~g~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~G 300 (332)
.++ .+ .||.|+.. ++. ...+..+.+.|+|+ |.+++..
T Consensus 223 -~~l-~~-~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 223 -RDL-NG-QFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred -hhc-CC-CCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 122 23 69999753 333 24678899999998 9988753
No 160
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.31 E-value=0.003 Score=54.47 Aligned_cols=111 Identities=14% Similarity=0.250 Sum_probs=74.0
Q ss_pred CCCEEEEECC--ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-HcCCC-eeeCCCCC-CCchHHHHHHHhcCCCCcc
Q 043260 196 KGSSVAVFGL--GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-AFGMT-DFINPDDE-PNKSISELVKEMTHGTGVD 270 (332)
Q Consensus 196 ~g~~vlV~G~--g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~-~v~~~~~~-~~~~~~~~~~~~~~~~g~d 270 (332)
..+.|||+|+ |++|.+++.-...-|+ .|+++.++-++.+.+. ++|.. +-+|..++ ....+...+++.++| ..|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~G-kld 83 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDG-KLD 83 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCC-ceE
Confidence 4567999975 9999999998889999 9999999988877554 77743 33444431 222333455555555 789
Q ss_pred EEEEcCCCh----------HHHHHH----------------HHHhccCCcEEEEEcCCCC-CcccC
Q 043260 271 YGFECTGVA----------SLISEA----------------LEATKLGKGKVMAIGAANE-AKVPL 309 (332)
Q Consensus 271 ~vid~~g~~----------~~~~~~----------------~~~l~~~~G~~v~~G~~~~-~~~~~ 309 (332)
+.++++|-+ +..+++ ...++.. |++|.+|+..+ .+++|
T Consensus 84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~~vpfpf 148 (289)
T KOG1209|consen 84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAGVVPFPF 148 (289)
T ss_pred EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeEEeccch
Confidence 999988853 111111 2244555 99999998875 33433
No 161
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.005 Score=55.71 Aligned_cols=78 Identities=18% Similarity=0.316 Sum_probs=54.3
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCee-eCCCCCCCchHHHHHHHhc-CCCCccEEEE
Q 043260 198 SSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDF-INPDDEPNKSISELVKEMT-HGTGVDYGFE 274 (332)
Q Consensus 198 ~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~~~~~~-~~~g~d~vid 274 (332)
+++||+|+ |++|..+++.+...|+ +|++++++.++.+.+.+.+...+ .|..+ .+++.+.+.... ...++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence 47899998 9999999999999998 99999998887776666555433 34433 233333333321 1126899999
Q ss_pred cCCC
Q 043260 275 CTGV 278 (332)
Q Consensus 275 ~~g~ 278 (332)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9983
No 162
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.27 E-value=0.0052 Score=52.62 Aligned_cols=103 Identities=17% Similarity=0.149 Sum_probs=65.3
Q ss_pred hhCCCCCCEEEEECCChHHHHHHHHHHHc-CCCeEEEEcCCcchHHHHHHcCCCee-eCCCCCCCchHHHHHHHhcCCCC
Q 043260 191 EFKVEKGSSVAVFGLGAVGLGVMDRARIQ-GAAKIIGIDKNPCRKDKGEAFGMTDF-INPDDEPNKSISELVKEMTHGTG 268 (332)
Q Consensus 191 ~~~~~~g~~vlV~G~g~vG~~~~~la~~~-G~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~~~~~~~~~g 268 (332)
...+++|++||.+|+|.-+. +..+++.. +..+|+++|.++.+ ...+...+ .+..+ ....+.+.+..+..+
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~ 98 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDK 98 (188)
T ss_pred hcccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCC
Confidence 44578999999999977444 44444443 44489999998864 11233322 12222 333344555555558
Q ss_pred ccEEEEcC-----CC------------hHHHHHHHHHhccCCcEEEEEcCC
Q 043260 269 VDYGFECT-----GV------------ASLISEALEATKLGKGKVMAIGAA 302 (332)
Q Consensus 269 ~d~vid~~-----g~------------~~~~~~~~~~l~~~~G~~v~~G~~ 302 (332)
+|+|+... |. ...+..+.+.|+++ |++++....
T Consensus 99 ~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~~~ 148 (188)
T TIGR00438 99 VDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKVFQ 148 (188)
T ss_pred ccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEEcc
Confidence 99999632 21 34678899999998 999986544
No 163
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.25 E-value=0.0034 Score=53.24 Aligned_cols=105 Identities=18% Similarity=0.269 Sum_probs=73.8
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCeeeCCCCCCCchHHHHHHHhcC
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTDFINPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~v~~~~~~~~~~~~~~~~~~~~ 265 (332)
...++++|+.++=+|+|. |...++++...-..+|+++++++++.+.. +++|.+-+.... .+..+.+.++
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~----g~Ap~~L~~~-- 100 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVE----GDAPEALPDL-- 100 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEe----ccchHhhcCC--
Confidence 455889999888889866 66777888555556999999999988765 558876332222 1122333332
Q ss_pred CCCccEEEEcCCC--hHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 266 GTGVDYGFECTGV--ASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 266 ~~g~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
..+|.+|---|. +..++.+++.|+++ |++|.--..-
T Consensus 101 -~~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~naitl 138 (187)
T COG2242 101 -PSPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAITL 138 (187)
T ss_pred -CCCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeecH
Confidence 258999975553 35688999999998 9999887665
No 164
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.22 E-value=0.0038 Score=58.17 Aligned_cols=101 Identities=19% Similarity=0.195 Sum_probs=71.6
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHH----HcCCCeeeCCCCCCCchHHHHHHHhc
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGA-AKIIGIDKNPCRKDKGE----AFGMTDFINPDDEPNKSISELVKEMT 264 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~~~~~~ 264 (332)
+..+++++++||.+|+|. |..++.+++..+. ..|+.++.+++..+.++ +.|.+.+.... .+..+.. .
T Consensus 74 ~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~---~ 145 (322)
T PRK13943 74 EWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGV---P 145 (322)
T ss_pred HhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhcc---c
Confidence 556788999999999984 9999999988763 36999999988766554 46765433222 1221111 1
Q ss_pred CCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEE
Q 043260 265 HGTGVDYGFECTGVASLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 265 ~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 299 (332)
....||+|+.+.+........++.|+++ |+++..
T Consensus 146 ~~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 146 EFAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred ccCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 1236999999988766667889999998 987763
No 165
>PRK06182 short chain dehydrogenase; Validated
Probab=97.17 E-value=0.004 Score=56.35 Aligned_cols=80 Identities=18% Similarity=0.267 Sum_probs=55.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCee-eCCCCCCCchHHHHHHHhcC-CCCccEE
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDF-INPDDEPNKSISELVKEMTH-GTGVDYG 272 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~~~~~~~-~~g~d~v 272 (332)
++++++|+|+ |++|..+++.+...|. +|+++++++++++.+.+.+...+ .|..+ .+++.+.+.+... ..++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence 3678999998 9999999999988999 99999998887765555454332 23333 2333333333211 1268999
Q ss_pred EEcCCC
Q 043260 273 FECTGV 278 (332)
Q Consensus 273 id~~g~ 278 (332)
|++.|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 999884
No 166
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.11 E-value=0.0038 Score=60.24 Aligned_cols=99 Identities=11% Similarity=0.074 Sum_probs=66.5
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHH-HHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEE
Q 043260 194 VEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKD-KGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYG 272 (332)
Q Consensus 194 ~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~v 272 (332)
--.+.+++|+|+|.+|.+++..+...|+.+|+++.++.+|.+ ++.+++...++.. + .+.+... .+|+|
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~-----~----~l~~~l~--~aDiV 246 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL-----S----ELPQLIK--KADII 246 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH-----H----HHHHHhc--cCCEE
Confidence 346789999999999999999999999879999999987755 4555652223222 1 2233222 48999
Q ss_pred EEcCCChHHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 273 FECTGVASLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 273 id~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
|.|++.+..+-. .+.+....=.++.++.|.+
T Consensus 247 I~aT~a~~~vi~-~~~~~~~~~~~iDLavPRd 277 (414)
T PRK13940 247 IAAVNVLEYIVT-CKYVGDKPRVFIDISIPQA 277 (414)
T ss_pred EECcCCCCeeEC-HHHhCCCCeEEEEeCCCCC
Confidence 999998744321 1222221035788888865
No 167
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.06 E-value=0.0096 Score=52.13 Aligned_cols=101 Identities=20% Similarity=0.277 Sum_probs=69.5
Q ss_pred HHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHH----cCCCe--eeCCCCCCCchHHHHH
Q 043260 188 AWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGA-AKIIGIDKNPCRKDKGEA----FGMTD--FINPDDEPNKSISELV 260 (332)
Q Consensus 188 l~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~~ 260 (332)
+....++++|++||-+|+|. |..+..+++..+. .+|+.++.+++-.+.+++ .|.+. ++..+. .
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~---~------ 137 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG---T------ 137 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc---c------
Confidence 34667889999999999876 7777788877653 389999999887765543 45432 222211 0
Q ss_pred HHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEE
Q 043260 261 KEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 261 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 299 (332)
........||+|+-............+.|+++ |+++..
T Consensus 138 ~~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 138 LGYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred cCCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 01112336999987666555667889999998 998764
No 168
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=97.05 E-value=0.0046 Score=56.84 Aligned_cols=134 Identities=20% Similarity=0.290 Sum_probs=76.3
Q ss_pred ceeeEEecCCceEEcCCCCChhhhhhcccchhhhHHHHHH-hhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcC
Q 043260 151 MTEYMVVDANYVVKVDPSIDLSLAGFLSCGYSSGFGAAWK-EFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDK 229 (332)
Q Consensus 151 ~a~~~~v~~~~v~~lP~~~~~~~aa~l~~~~~ta~~al~~-~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~ 229 (332)
|.+|-.-+...++.+++++.|-.+. ...|.. ++.. ..-..+|++||=+|+|. |.+++..++ +|+++|+++|.
T Consensus 120 w~~~~~~~~~~~I~idPg~AFGTG~----H~TT~l-cl~~l~~~~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~Di 192 (295)
T PF06325_consen 120 WEEYPEPPDEIVIEIDPGMAFGTGH----HPTTRL-CLELLEKYVKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDI 192 (295)
T ss_dssp T----SSTTSEEEEESTTSSS-SSH----CHHHHH-HHHHHHHHSSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEES
T ss_pred CcccCCCCCcEEEEECCCCcccCCC----CHHHHH-HHHHHHHhccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecC
Confidence 5555222445677777777554332 222222 1211 12267899999999865 665555554 68889999999
Q ss_pred CcchHHHHHH----cCCC-ee-eCCCCCCCchHHHHHHHhcCCCCccEEEEcCCChH---HHHHHHHHhccCCcEEEEEc
Q 043260 230 NPCRKDKGEA----FGMT-DF-INPDDEPNKSISELVKEMTHGTGVDYGFECTGVAS---LISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 230 ~~~~~~~~~~----lga~-~v-~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~---~~~~~~~~l~~~~G~~v~~G 300 (332)
++...+.+++ -|.. .+ +.... +. . ...||+|+-+.-... ......+.++++ |.+++.|
T Consensus 193 Dp~Av~~a~~N~~~N~~~~~~~v~~~~----~~-------~-~~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSG 259 (295)
T PF06325_consen 193 DPLAVEAARENAELNGVEDRIEVSLSE----DL-------V-EGKFDLVVANILADVLLELAPDIASLLKPG-GYLILSG 259 (295)
T ss_dssp SCHHHHHHHHHHHHTT-TTCEEESCTS----CT-------C-CS-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCeeEEEEEec----cc-------c-cccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEcc
Confidence 9987665543 2322 22 21111 11 1 147999998887642 234566788998 9999999
Q ss_pred CCCC
Q 043260 301 AANE 304 (332)
Q Consensus 301 ~~~~ 304 (332)
....
T Consensus 260 Il~~ 263 (295)
T PF06325_consen 260 ILEE 263 (295)
T ss_dssp EEGG
T ss_pred ccHH
Confidence 8775
No 169
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0043 Score=57.05 Aligned_cols=80 Identities=20% Similarity=0.302 Sum_probs=54.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHH-HHHcCCC-ee----eCCCCCCCchHHHHHHHhcCC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDK-GEAFGMT-DF----INPDDEPNKSISELVKEMTHG-T 267 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~-~~~lga~-~v----~~~~~~~~~~~~~~~~~~~~~-~ 267 (332)
+|+++||+|+ |++|..+++.+...|+ +|++++++.++++. .++++.. .+ .|..+ .++..+.+.+.... .
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 5789999998 9999999999999999 89999998887654 3455421 11 23332 23333333322111 2
Q ss_pred CccEEEEcCCC
Q 043260 268 GVDYGFECTGV 278 (332)
Q Consensus 268 g~d~vid~~g~ 278 (332)
.+|++|++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 58999999984
No 170
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.04 E-value=0.0067 Score=60.45 Aligned_cols=105 Identities=12% Similarity=0.188 Sum_probs=68.1
Q ss_pred HhhCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH---------cCCC-----eee--CCCCCC
Q 043260 190 KEFKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA---------FGMT-----DFI--NPDDEP 252 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~---------lga~-----~v~--~~~~~~ 252 (332)
+..+.+.|+++||+|+ |.+|..+++.+...|. +|++++++.++.+.+.+ .|.. .++ |..+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-- 149 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-- 149 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC--
Confidence 4556788999999998 9999999999998998 99999998887653321 1211 122 2222
Q ss_pred CchHHHHHHHhcCCCCccEEEEcCCChH---------------HHHHHHHHhccC-CcEEEEEcCCC
Q 043260 253 NKSISELVKEMTHGTGVDYGFECTGVAS---------------LISEALEATKLG-KGKVMAIGAAN 303 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~g~d~vid~~g~~~---------------~~~~~~~~l~~~-~G~~v~~G~~~ 303 (332)
. +.+.+..+ ++|+||+++|... ....+++.+... .++||+++..+
T Consensus 150 -~---esI~~aLg--giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 150 -P---DQIGPALG--NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred -H---HHHHHHhc--CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 1 22333333 5899999987531 122334444333 26899998765
No 171
>PRK12742 oxidoreductase; Provisional
Probab=97.03 E-value=0.015 Score=51.15 Aligned_cols=102 Identities=22% Similarity=0.322 Sum_probs=64.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcC-CcchHH-HHHHcCCCee-eCCCCCCCchHHHHHHHhcCCCCccE
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDK-NPCRKD-KGEAFGMTDF-INPDDEPNKSISELVKEMTHGTGVDY 271 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~-~~~~~~-~~~~lga~~v-~~~~~~~~~~~~~~~~~~~~~~g~d~ 271 (332)
+++++||+|+ |++|..+++.+...|+ +|+.+.+ ++++.+ +..+++...+ .|..+ .+++.+.+.+. .++|+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~---~~id~ 78 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRKS---GALDI 78 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHHh---CCCcE
Confidence 4789999998 9999999999999999 7877654 344443 3355565433 23322 22333333321 25899
Q ss_pred EEEcCCChH-------------------------HHHHHHHHhccCCcEEEEEcCCCC
Q 043260 272 GFECTGVAS-------------------------LISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 272 vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
+|+++|... ....++..++++ |+++.+++...
T Consensus 79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~~ 135 (237)
T PRK12742 79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVNG 135 (237)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEecccc
Confidence 999987420 012334455666 89999887553
No 172
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.0046 Score=54.19 Aligned_cols=77 Identities=19% Similarity=0.349 Sum_probs=53.7
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeee--CCCCCCCchHHHHHHHhcCCCCccEEEE
Q 043260 198 SSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFI--NPDDEPNKSISELVKEMTHGTGVDYGFE 274 (332)
Q Consensus 198 ~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~--~~~~~~~~~~~~~~~~~~~~~g~d~vid 274 (332)
++++|+|+ |++|...++.+...|. +|+++++++++.+.+++++...++ |..+ .+++.+.+.++.. .++|+||.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~-~~id~vi~ 77 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQG-QRFDLLFV 77 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhhc-CCCCEEEE
Confidence 46899998 9999999999888999 999999988877666555432222 3322 2334444444433 37999999
Q ss_pred cCCC
Q 043260 275 CTGV 278 (332)
Q Consensus 275 ~~g~ 278 (332)
++|.
T Consensus 78 ~ag~ 81 (225)
T PRK08177 78 NAGI 81 (225)
T ss_pred cCcc
Confidence 8764
No 173
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=96.97 E-value=0.00017 Score=57.49 Aligned_cols=50 Identities=28% Similarity=0.474 Sum_probs=36.5
Q ss_pred cCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCC--ChHHHHHHHHHhccCCcEEEEEcC
Q 043260 240 FGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTG--VASLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 240 lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g--~~~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
|||++++++++ .++ +...++|+|||++| ....+..++++| ++ |+++.++.
T Consensus 1 LGAd~vidy~~---~~~-------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~ 52 (127)
T PF13602_consen 1 LGADEVIDYRD---TDF-------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG 52 (127)
T ss_dssp CT-SEEEETTC---SHH-------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S
T ss_pred CCcCEEecCCC---ccc-------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC
Confidence 69999999987 655 33558999999999 654447777888 98 99999984
No 174
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.96 E-value=0.005 Score=47.55 Aligned_cols=92 Identities=21% Similarity=0.304 Sum_probs=62.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHH-cCCCeEEEEcCCcchHHHHHHc----CC-Cee-eCCCCCCCchHHHHHHHhcCCCC
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARI-QGAAKIIGIDKNPCRKDKGEAF----GM-TDF-INPDDEPNKSISELVKEMTHGTG 268 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~-~G~~~Vi~~~~~~~~~~~~~~l----ga-~~v-~~~~~~~~~~~~~~~~~~~~~~g 268 (332)
|+++||-+|+|. |..+..+++. .+. +|+++|.+++-++.+++. +. +.+ +...+ + . ........
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d-----~-~--~~~~~~~~ 70 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQGD-----A-E--FDPDFLEP 70 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESC-----C-H--GGTTTSSC
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECc-----c-c--cCcccCCC
Confidence 688999999977 7888888884 566 999999999888776542 22 222 22221 1 1 11222336
Q ss_pred ccEEEEcC-CCh---------HHHHHHHHHhccCCcEEEE
Q 043260 269 VDYGFECT-GVA---------SLISEALEATKLGKGKVMA 298 (332)
Q Consensus 269 ~d~vid~~-g~~---------~~~~~~~~~l~~~~G~~v~ 298 (332)
||+|+... ... ..++.+.+.|+|+ |++++
T Consensus 71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi 109 (112)
T PF12847_consen 71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI 109 (112)
T ss_dssp EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred CCEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence 99999977 221 2378899999998 99886
No 175
>PRK04148 hypothetical protein; Provisional
Probab=96.96 E-value=0.0042 Score=50.08 Aligned_cols=100 Identities=17% Similarity=0.194 Sum_probs=68.3
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEE
Q 043260 193 KVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYG 272 (332)
Q Consensus 193 ~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~v 272 (332)
...++.+++++|.| .|...+..+...|. +|+++|.+++..+.+++.+.+.+.+.-- ..++ .+ -.++|+|
T Consensus 13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~-----y~~a~li 81 (134)
T PRK04148 13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EI-----YKNAKLI 81 (134)
T ss_pred ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HH-----HhcCCEE
Confidence 33456889999999 78766666667898 9999999999999999888755543221 0111 11 1268999
Q ss_pred EEcCCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 273 FECTGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 273 id~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
...-..++....+++..++-+..+++.=..+
T Consensus 82 ysirpp~el~~~~~~la~~~~~~~~i~~l~~ 112 (134)
T PRK04148 82 YSIRPPRDLQPFILELAKKINVPLIIKPLSG 112 (134)
T ss_pred EEeCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 9988887666666666666534455444333
No 176
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.95 E-value=0.011 Score=56.55 Aligned_cols=98 Identities=20% Similarity=0.213 Sum_probs=70.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHH-HHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEE
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKD-KGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGF 273 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vi 273 (332)
-.+.++||+|+|-+|.+++..+...|..+|++..|+.+|.+ +++++|+..+ .. ++ +..... .+|+||
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l-----~e----l~~~l~--~~DvVi 243 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-AL-----EE----LLEALA--EADVVI 243 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cH-----HH----HHHhhh--hCCEEE
Confidence 47789999999999999999999999889999999988865 7788995332 22 11 222222 489999
Q ss_pred EcCCChHHH---HHHHHHhccCCc-EEEEEcCCCC
Q 043260 274 ECTGVASLI---SEALEATKLGKG-KVMAIGAANE 304 (332)
Q Consensus 274 d~~g~~~~~---~~~~~~l~~~~G-~~v~~G~~~~ 304 (332)
.+++.+..+ ....+.++.... .++++++|..
T Consensus 244 ssTsa~~~ii~~~~ve~a~~~r~~~livDiavPRd 278 (414)
T COG0373 244 SSTSAPHPIITREMVERALKIRKRLLIVDIAVPRD 278 (414)
T ss_pred EecCCCccccCHHHHHHHHhcccCeEEEEecCCCC
Confidence 999986432 344444444323 5788898876
No 177
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.013 Score=51.46 Aligned_cols=82 Identities=15% Similarity=0.201 Sum_probs=52.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCC---CeeeCCCCCCCchHHHHHHHhcC-CCCc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGM---TDFINPDDEPNKSISELVKEMTH-GTGV 269 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga---~~v~~~~~~~~~~~~~~~~~~~~-~~g~ 269 (332)
++.+++|+|+ |.+|..+++.+...|. +|+++++++++.+.+ +++.. -+.+..+-....++.+.+.+... -.++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999998 9999999998888899 899999988766533 33421 12221111112344443433211 1268
Q ss_pred cEEEEcCCC
Q 043260 270 DYGFECTGV 278 (332)
Q Consensus 270 d~vid~~g~ 278 (332)
|+||++.+.
T Consensus 84 d~vi~~ag~ 92 (237)
T PRK07326 84 DVLIANAGV 92 (237)
T ss_pred CEEEECCCC
Confidence 999998764
No 178
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.92 E-value=0.017 Score=50.29 Aligned_cols=100 Identities=13% Similarity=0.104 Sum_probs=67.9
Q ss_pred HHhhCCCCCCEEEEECCChHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHH----HcCCC---eeeCCCCCCCchHHHHH
Q 043260 189 WKEFKVEKGSSVAVFGLGAVGLGVMDRARIQG-AAKIIGIDKNPCRKDKGE----AFGMT---DFINPDDEPNKSISELV 260 (332)
Q Consensus 189 ~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G-~~~Vi~~~~~~~~~~~~~----~lga~---~v~~~~~~~~~~~~~~~ 260 (332)
.+...++++++||-+|+|. |..+..+++..+ ..+|+.++.+++-.+.++ +.+.. .++..+. .+.
T Consensus 65 ~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~------~~~- 136 (205)
T PRK13944 65 CELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG------KRG- 136 (205)
T ss_pred HHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc------ccC-
Confidence 3566788999999999876 777777777764 238999999987666554 34532 2332221 111
Q ss_pred HHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEE
Q 043260 261 KEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 261 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 299 (332)
+.....||+|+-+.........+.+.|+++ |++++.
T Consensus 137 --~~~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 137 --LEKHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred --CccCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 111237999998777655667888999998 998763
No 179
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.92 E-value=0.014 Score=50.12 Aligned_cols=99 Identities=18% Similarity=0.175 Sum_probs=63.9
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----HcCCCeeeCCCCCCCchHHHHHHHhcCCCC
Q 043260 193 KVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE----AFGMTDFINPDDEPNKSISELVKEMTHGTG 268 (332)
Q Consensus 193 ~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~~~~~~~~~g 268 (332)
.++++++||-+|+|. |..+..+++.....+|+.+|.+++..+.++ +.+.+.+ .... .+. .+......
T Consensus 42 ~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~---~d~----~~~~~~~~ 112 (187)
T PRK00107 42 YLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVH---GRA----EEFGQEEK 112 (187)
T ss_pred hcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe---ccH----hhCCCCCC
Confidence 345689999999865 666666666554349999999988776554 3555432 1111 111 11222337
Q ss_pred ccEEEEcCCC--hHHHHHHHHHhccCCcEEEEEcC
Q 043260 269 VDYGFECTGV--ASLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 269 ~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
||+|+..... +..+..+.+.|+++ |+++++-.
T Consensus 113 fDlV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~~ 146 (187)
T PRK00107 113 FDVVTSRAVASLSDLVELCLPLLKPG-GRFLALKG 146 (187)
T ss_pred ccEEEEccccCHHHHHHHHHHhcCCC-eEEEEEeC
Confidence 9999975332 25678899999998 99888743
No 180
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.92 E-value=0.0082 Score=50.58 Aligned_cols=97 Identities=19% Similarity=0.213 Sum_probs=64.8
Q ss_pred hhcccchhhhHHHHHHhhCCCCCCEEEEECCCh-HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCC
Q 043260 175 GFLSCGYSSGFGAAWKEFKVEKGSSVAVFGLGA-VGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPN 253 (332)
Q Consensus 175 a~l~~~~~ta~~al~~~~~~~~g~~vlV~G~g~-vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 253 (332)
...|+....+...+.+...--.|.+++|+|+|. +|..++..++..|+ +|+++.++.+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~--------------------- 79 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK--------------------- 79 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------
Confidence 444544444444343333346889999999986 59989999999999 8888876521
Q ss_pred chHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 254 KSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 254 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
++.+.+ . .+|+||.+++.+..+.. +.++++ -.++.++.+.
T Consensus 80 -~l~~~l----~--~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr 119 (168)
T cd01080 80 -NLKEHT----K--QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR 119 (168)
T ss_pred -hHHHHH----h--hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence 122222 1 48999999998654332 356766 7888888876
No 181
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.89 E-value=0.018 Score=48.59 Aligned_cols=95 Identities=21% Similarity=0.318 Sum_probs=64.7
Q ss_pred EEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCC
Q 043260 200 VAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGV 278 (332)
Q Consensus 200 vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~ 278 (332)
|+|+|+ |.+|..+++.+...|. +|+++.|++++.+. ..+.+.+ ..+- .+. +.+.+... ++|.||.+.+.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~-~~d~---~d~-~~~~~al~--~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEII-QGDL---FDP-DSVKAALK--GADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEE-ESCT---TCH-HHHHHHHT--TSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccc-eeee---hhh-hhhhhhhh--hcchhhhhhhh
Confidence 689998 9999999999999998 99999999998776 3344333 2222 222 22333222 69999999984
Q ss_pred ----hHHHHHHHHHhccCC-cEEEEEcCCCC
Q 043260 279 ----ASLISEALEATKLGK-GKVMAIGAANE 304 (332)
Q Consensus 279 ----~~~~~~~~~~l~~~~-G~~v~~G~~~~ 304 (332)
.+.....++.++..+ .+++.++..+.
T Consensus 71 ~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~ 101 (183)
T PF13460_consen 71 PPKDVDAAKNIIEAAKKAGVKRVVYLSSAGV 101 (183)
T ss_dssp TTTHHHHHHHHHHHHHHTTSSEEEEEEETTG
T ss_pred hcccccccccccccccccccccceeeecccc
Confidence 234556666665541 37777765543
No 182
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.88 E-value=0.0092 Score=52.55 Aligned_cols=96 Identities=20% Similarity=0.188 Sum_probs=65.5
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCe--eeCCCCCCCchHHHHHHHhcCCCCccEE
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTD--FINPDDEPNKSISELVKEMTHGTGVDYG 272 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~~~~~~~~~g~d~v 272 (332)
-+|.+||=+|+|+ |++...+|+ +|+ +|+++|.+++-.+.++.-.... -+++.. ...+++... +..||+|
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----~~~edl~~~--~~~FDvV 128 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ----ATVEDLASA--GGQFDVV 128 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh----hhHHHHHhc--CCCccEE
Confidence 5889999999976 677766666 777 9999999999888776422211 144542 223333322 2479999
Q ss_pred EE-----cCCChH-HHHHHHHHhccCCcEEEEEc
Q 043260 273 FE-----CTGVAS-LISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 273 id-----~~g~~~-~~~~~~~~l~~~~G~~v~~G 300 (332)
++ -+.+++ .+..+.+.++|+ |.+++-=
T Consensus 129 ~cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~ST 161 (243)
T COG2227 129 TCMEVLEHVPDPESFLRACAKLVKPG-GILFLST 161 (243)
T ss_pred EEhhHHHccCCHHHHHHHHHHHcCCC-cEEEEec
Confidence 87 355554 467899999998 8776543
No 183
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.013 Score=51.78 Aligned_cols=80 Identities=20% Similarity=0.209 Sum_probs=51.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCC-eee--CCCCCCCchHHHHHHHhcCC-
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMT-DFI--NPDDEPNKSISELVKEMTHG- 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~v~--~~~~~~~~~~~~~~~~~~~~- 266 (332)
++++++|+|+ |++|..++..+...|+ +|+++++++++.+.. ++.+.. .++ |..+ .+++.+.+.+....
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAAL 82 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4788999998 9999999999999999 899998887765432 223433 222 3332 23333222222111
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
.++|++|.++|.
T Consensus 83 ~~id~vi~~ag~ 94 (250)
T PRK12939 83 GGLDGLVNNAGI 94 (250)
T ss_pred CCCCEEEECCCC
Confidence 268999999885
No 184
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.87 E-value=0.0084 Score=50.98 Aligned_cols=46 Identities=30% Similarity=0.691 Sum_probs=38.2
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcC
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFG 241 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lg 241 (332)
-.|++|.|+|.|.+|..++++++.+|+ +|++.+++....+...+.+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~ 79 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFG 79 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccc
Confidence 468999999999999999999999999 9999999887665344443
No 185
>PRK14967 putative methyltransferase; Provisional
Probab=96.86 E-value=0.021 Score=50.34 Aligned_cols=99 Identities=15% Similarity=0.125 Sum_probs=66.0
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH----cCCC-eeeCCCCCCCchHHHHHHHhc
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA----FGMT-DFINPDDEPNKSISELVKEMT 264 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~~~~~~ 264 (332)
....++++++||-.|+|. |..+..+++. +..+|+++|.+++..+.+++ .+.. .+++. ++.+. .
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~------d~~~~----~ 97 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG------DWARA----V 97 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC------chhhh----c
Confidence 334578899999999987 8888888775 55589999999987775543 3433 22222 22221 1
Q ss_pred CCCCccEEEEcCCC---------------------------hHHHHHHHHHhccCCcEEEEEcC
Q 043260 265 HGTGVDYGFECTGV---------------------------ASLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 265 ~~~g~d~vid~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
....||+|+.+.+- ...+..+.+.|+++ |+++++-.
T Consensus 98 ~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~~ 160 (223)
T PRK14967 98 EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQS 160 (223)
T ss_pred cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 23379999986320 12356788999998 99987643
No 186
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.014 Score=54.83 Aligned_cols=106 Identities=16% Similarity=0.176 Sum_probs=67.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCee---eCCCCCCCchHHHHHHHhcCC-
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTDF---INPDDEPNKSISELVKEMTHG- 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~v---~~~~~~~~~~~~~~~~~~~~~- 266 (332)
++++++|+|+ |++|..+++.+...|+ +|+++++++++++.+ ++.|.+.. .|..+ .++..+.+.+....
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL 83 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence 4678999998 9999999999999999 899999988776533 33455432 23333 23333332222111
Q ss_pred CCccEEEEcCCChH-------------------------HHHHHHHHhccC-CcEEEEEcCCCC
Q 043260 267 TGVDYGFECTGVAS-------------------------LISEALEATKLG-KGKVMAIGAANE 304 (332)
Q Consensus 267 ~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~-~G~~v~~G~~~~ 304 (332)
.++|++|+++|... ....++..+.+. .|+++.+++...
T Consensus 84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~ 147 (334)
T PRK07109 84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA 147 (334)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence 15899999988420 122345555442 289999987654
No 187
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.02 Score=50.73 Aligned_cols=103 Identities=20% Similarity=0.236 Sum_probs=62.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcc-hHHH----HHHcCCC-eee--CCCCCCCchHHHHHHHhcCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPC-RKDK----GEAFGMT-DFI--NPDDEPNKSISELVKEMTHG 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~-~~~~----~~~lga~-~v~--~~~~~~~~~~~~~~~~~~~~ 266 (332)
+++++||+|+ |.+|..++..+...|. +|+++.++.+ +.+. ++..+.. ..+ |..+ .++..+.+.+....
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence 4678999998 9999999999988998 8988887653 3322 2223332 122 3332 23333333332211
Q ss_pred -CCccEEEEcCCCh-------------------HHHHHHHHHhccCCcEEEEEcCC
Q 043260 267 -TGVDYGFECTGVA-------------------SLISEALEATKLGKGKVMAIGAA 302 (332)
Q Consensus 267 -~g~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~~v~~G~~ 302 (332)
.++|++|.+.+.. ..++.+.+.+..+ |+++.+++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS~ 136 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTSH 136 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeCc
Confidence 2589999887642 1334455555555 888888763
No 188
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.82 E-value=0.015 Score=56.68 Aligned_cols=81 Identities=15% Similarity=0.267 Sum_probs=51.8
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcch--H-HHHHHcCCCee-eCCCCCCCchHHHHHHHhcC-CCC
Q 043260 195 EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCR--K-DKGEAFGMTDF-INPDDEPNKSISELVKEMTH-GTG 268 (332)
Q Consensus 195 ~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~--~-~~~~~lga~~v-~~~~~~~~~~~~~~~~~~~~-~~g 268 (332)
.+++++||+|+ |++|..+++.+...|+ +|++++++... + +...+++...+ .|..+ .++..+.+..... ..+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA--PDAPARIAEHLAERHGG 284 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhCCC
Confidence 35789999998 9999999999999999 89988874322 2 23345564432 34433 2223332222211 115
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
+|+||++.|.
T Consensus 285 id~vi~~AG~ 294 (450)
T PRK08261 285 LDIVVHNAGI 294 (450)
T ss_pred CCEEEECCCc
Confidence 8999999883
No 189
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.82 E-value=0.017 Score=54.93 Aligned_cols=98 Identities=13% Similarity=0.140 Sum_probs=68.7
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcC---CC-eeeCCCCCCCchHHHHHHHhcCCCCccEEE
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFG---MT-DFINPDDEPNKSISELVKEMTHGTGVDYGF 273 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lg---a~-~v~~~~~~~~~~~~~~~~~~~~~~g~d~vi 273 (332)
++|||+|+|.+|..+++.+...|-.+|++.+++.++.+.+.... .. ..+|..+ . +++.++.. ++|+||
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-----~-~al~~li~--~~d~VI 73 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-----V-DALVALIK--DFDLVI 73 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-----h-HHHHHHHh--cCCEEE
Confidence 57999999999999999998888459999999999888876653 21 2334333 2 23334433 369999
Q ss_pred EcCCChHHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 274 ECTGVASLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 274 d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
++.+..-....+-.|++.+ -.++.......
T Consensus 74 n~~p~~~~~~i~ka~i~~g-v~yvDts~~~~ 103 (389)
T COG1748 74 NAAPPFVDLTILKACIKTG-VDYVDTSYYEE 103 (389)
T ss_pred EeCCchhhHHHHHHHHHhC-CCEEEcccCCc
Confidence 9999854444444566655 67777777653
No 190
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.017 Score=51.86 Aligned_cols=80 Identities=19% Similarity=0.200 Sum_probs=53.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHH-HHHcCCC-ee--eCCCCCCCchHHHHHHHhcC-CCCc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDK-GEAFGMT-DF--INPDDEPNKSISELVKEMTH-GTGV 269 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~-~~~lga~-~v--~~~~~~~~~~~~~~~~~~~~-~~g~ 269 (332)
.+++++|+|+ |++|..+++.+...|+ +|++++++.++.+. .++++.. .. .|..+ .+++.+.+.+... -...
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999998 9999999999999999 99999998876553 4455532 12 23332 2333333333211 1258
Q ss_pred cEEEEcCCC
Q 043260 270 DYGFECTGV 278 (332)
Q Consensus 270 d~vid~~g~ 278 (332)
|++|++.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999999874
No 191
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.80 E-value=0.021 Score=50.50 Aligned_cols=94 Identities=16% Similarity=0.244 Sum_probs=63.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCC--eEEEEcCC----cch--------HHHHHHcCCCeeeCCCCCCCchHHHHH
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAA--KIIGIDKN----PCR--------KDKGEAFGMTDFINPDDEPNKSISELV 260 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~--~Vi~~~~~----~~~--------~~~~~~lga~~v~~~~~~~~~~~~~~~ 260 (332)
-.+.+++|+|+|+.|.+++..+...|+. +|++++++ .+| .+++++++... . + .++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence 4678999999999999999999999997 89999998 443 33445543211 0 0 1233333
Q ss_pred HHhcCCCCccEEEEcCCChHHH-HHHHHHhccCCcEEEEEcCCC
Q 043260 261 KEMTHGTGVDYGFECTGVASLI-SEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 261 ~~~~~~~g~d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~G~~~ 303 (332)
.++|++|++++.. .+ ...++.+.++ ..++.+.++.
T Consensus 96 ------~~~dvlIgaT~~G-~~~~~~l~~m~~~-~ivf~lsnP~ 131 (226)
T cd05311 96 ------KGADVFIGVSRPG-VVKKEMIKKMAKD-PIVFALANPV 131 (226)
T ss_pred ------hcCCEEEeCCCCC-CCCHHHHHhhCCC-CEEEEeCCCC
Confidence 1489999999743 43 4667777776 6666666443
No 192
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.77 E-value=0.0092 Score=52.95 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=60.6
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchH-------------------H----HHHHcCCCeeeCCCCCCC
Q 043260 197 GSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRK-------------------D----KGEAFGMTDFINPDDEPN 253 (332)
Q Consensus 197 g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~-------------------~----~~~~lga~~v~~~~~~~~ 253 (332)
..+|+|+|+|++|..++..+...|..+++++|.+.-.. + .++++..+.-+...+
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~--- 87 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE--- 87 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee---
Confidence 46799999999999999999999999999999654211 1 112222221111111
Q ss_pred chH-HHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 254 KSI-SELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 254 ~~~-~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
..+ .+.+.++... .+|+||||..+...-..+.+.....+-.++..+..+
T Consensus 88 ~~i~~~~~~~l~~~-~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~g~g 137 (231)
T cd00755 88 EFLTPDNSEDLLGG-DPDFVVDAIDSIRAKVALIAYCRKRKIPVISSMGAG 137 (231)
T ss_pred eecCHhHHHHHhcC-CCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEeCCc
Confidence 111 0112233322 599999999986554455555555423555554444
No 193
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.77 E-value=0.016 Score=45.33 Aligned_cols=101 Identities=17% Similarity=0.306 Sum_probs=68.1
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----HcCCCe--eeCCCCCCCchHHHHHHHh
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE----AFGMTD--FINPDDEPNKSISELVKEM 263 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~--v~~~~~~~~~~~~~~~~~~ 263 (332)
....+.++++++-+|+|. |..+..+++..+..+|+.+|.++...+.++ .++... ++..+. .. .....
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~---~~~~~ 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PE---ALEDS 85 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---cc---cChhh
Confidence 445667788999999977 888888988875458999999998777653 344432 222211 11 01111
Q ss_pred cCCCCccEEEEcCCC---hHHHHHHHHHhccCCcEEEEEc
Q 043260 264 THGTGVDYGFECTGV---ASLISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 264 ~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G 300 (332)
...+|+|+...+. ...+..+.+.|+++ |++++-.
T Consensus 86 --~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 86 --LPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred --cCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 1269999986543 23678999999998 9988654
No 194
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.006 Score=57.19 Aligned_cols=80 Identities=18% Similarity=0.317 Sum_probs=54.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCee-e--CCCCCCCchHHHHHHHhcC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTDF-I--NPDDEPNKSISELVKEMTH-G 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~v-~--~~~~~~~~~~~~~~~~~~~-~ 266 (332)
+++++||+|+ |++|.++++.+...|+ +|+++++++++++.+ ++.|.+.. + |..+ .++..+.+.+... .
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASFG 82 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHhc
Confidence 5688999998 9999999999999999 899999998877533 34565432 2 3332 2333332222211 1
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
.++|++|+++|.
T Consensus 83 g~iD~lVnnAG~ 94 (330)
T PRK06139 83 GRIDVWVNNVGV 94 (330)
T ss_pred CCCCEEEECCCc
Confidence 258999999984
No 195
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.022 Score=50.48 Aligned_cols=78 Identities=19% Similarity=0.318 Sum_probs=52.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHH-HHHcCCCee-e--CCCCCCCchHHH---HHHHhcCCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDK-GEAFGMTDF-I--NPDDEPNKSISE---LVKEMTHGT 267 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~-~~~lga~~v-~--~~~~~~~~~~~~---~~~~~~~~~ 267 (332)
++++++|+|+ |.+|...++.+...|+ +|+++++++++.+. .++++.... + |..+ ..+..+ .+.+.. .
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~--~ 79 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD--VAAQKALAQALAEAF--G 79 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHh--C
Confidence 4678999998 9999999999999999 89999988766543 345564322 2 2222 122222 222222 2
Q ss_pred CccEEEEcCCC
Q 043260 268 GVDYGFECTGV 278 (332)
Q Consensus 268 g~d~vid~~g~ 278 (332)
++|++|.+.|.
T Consensus 80 ~id~vi~~ag~ 90 (249)
T PRK06500 80 RLDAVFINAGV 90 (249)
T ss_pred CCCEEEECCCC
Confidence 58999998874
No 196
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.75 E-value=0.014 Score=53.54 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=37.7
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG 237 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~ 237 (332)
..+++|+|+|+|++|.+++..+...|+++|++++++.+|.+.+
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 3567899999999999999999999998999999998887644
No 197
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.74 E-value=0.023 Score=50.29 Aligned_cols=82 Identities=18% Similarity=0.227 Sum_probs=52.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcC--CC-eeeCCCCCCCchHHHHHHHh-cCCCCc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFG--MT-DFINPDDEPNKSISELVKEM-THGTGV 269 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lg--a~-~v~~~~~~~~~~~~~~~~~~-~~~~g~ 269 (332)
++.++||+|+ |.+|..+++.+...|. +|++++++.++.+.+ ..+. .. ..+..+-.+.+++...+.+. .....+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999998 9999999999988999 899999998776543 2222 21 12211111223333333322 111258
Q ss_pred cEEEEcCCC
Q 043260 270 DYGFECTGV 278 (332)
Q Consensus 270 d~vid~~g~ 278 (332)
|+||.+.|.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999998874
No 198
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.026 Score=50.86 Aligned_cols=79 Identities=15% Similarity=0.194 Sum_probs=51.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe-e--eCCCCCCCchHHHHHHHhcC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD-F--INPDDEPNKSISELVKEMTH-G 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~~~~~~~-~ 266 (332)
+++++||+|+ |++|..+++.+...|+ +|+++++++++.+.. .+.+... . +|..+ .+++.+.+.+... -
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADEF 84 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 5789999998 9999999999999999 899999887765422 2223322 2 23322 2334343433221 1
Q ss_pred CCccEEEEcCC
Q 043260 267 TGVDYGFECTG 277 (332)
Q Consensus 267 ~g~d~vid~~g 277 (332)
.++|++|.+.|
T Consensus 85 ~~iD~vi~~ag 95 (264)
T PRK07576 85 GPIDVLVSGAA 95 (264)
T ss_pred CCCCEEEECCC
Confidence 25899999876
No 199
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.011 Score=52.27 Aligned_cols=77 Identities=21% Similarity=0.361 Sum_probs=52.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCCCee-eCCCCCCCchHHHHHHHhcCCCCccEE
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGMTDF-INPDDEPNKSISELVKEMTHGTGVDYG 272 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~~~~~~~~~g~d~v 272 (332)
.+++++|+|+ |.+|..+++.+...|. +|++++++.++.+.+ ++.+...+ .|..+ ..+..+.+.+ ..++|+|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~---~~~~d~v 81 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD--DAAIRAALAA---AGAFDGL 81 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC--HHHHHHHHHH---hCCCCEE
Confidence 5678999998 9999999999999998 899999988776544 34454322 23332 1222222222 2268999
Q ss_pred EEcCCC
Q 043260 273 FECTGV 278 (332)
Q Consensus 273 id~~g~ 278 (332)
|++.|.
T Consensus 82 i~~ag~ 87 (245)
T PRK07060 82 VNCAGI 87 (245)
T ss_pred EECCCC
Confidence 999874
No 200
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.71 E-value=0.024 Score=47.39 Aligned_cols=90 Identities=16% Similarity=0.235 Sum_probs=56.6
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCC
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTG 277 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g 277 (332)
.+|.++|.|.+|...++-+...|. +|++.++++++.+.+.+.|+..+ ++..+.+. ..|+||-++.
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~s~~e~~~------~~dvvi~~v~ 66 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA--------DSPAEAAE------QADVVILCVP 66 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE--------SSHHHHHH------HBSEEEE-SS
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh--------hhhhhHhh------cccceEeecc
Confidence 368899999999999999999999 99999999999888877774333 22222222 2477777777
Q ss_pred ChHHHHHHHHH------hccCCcEEEEEcCCC
Q 043260 278 VASLISEALEA------TKLGKGKVMAIGAAN 303 (332)
Q Consensus 278 ~~~~~~~~~~~------l~~~~G~~v~~G~~~ 303 (332)
+.+.....+.. +.++ ..++..+...
T Consensus 67 ~~~~v~~v~~~~~i~~~l~~g-~iiid~sT~~ 97 (163)
T PF03446_consen 67 DDDAVEAVLFGENILAGLRPG-KIIIDMSTIS 97 (163)
T ss_dssp SHHHHHHHHHCTTHGGGS-TT-EEEEE-SS--
T ss_pred cchhhhhhhhhhHHhhccccc-eEEEecCCcc
Confidence 75554444332 3443 4555555443
No 201
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.023 Score=50.81 Aligned_cols=78 Identities=15% Similarity=0.189 Sum_probs=51.9
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-HcC-CC-ee--eCCCCCCCchHHHHHHHhcC--CCCc
Q 043260 198 SSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-AFG-MT-DF--INPDDEPNKSISELVKEMTH--GTGV 269 (332)
Q Consensus 198 ~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~lg-a~-~v--~~~~~~~~~~~~~~~~~~~~--~~g~ 269 (332)
+++||+|+ |.+|..+++.+...|. +|++++++.++.+.+. .++ .. .+ .|..+ ..++.+.+.+... ...+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 47899998 9999999999888998 9999999888766543 332 21 22 23332 2333333333211 2268
Q ss_pred cEEEEcCCC
Q 043260 270 DYGFECTGV 278 (332)
Q Consensus 270 d~vid~~g~ 278 (332)
|+||.++|.
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 999999885
No 202
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.68 E-value=0.014 Score=54.03 Aligned_cols=93 Identities=26% Similarity=0.451 Sum_probs=64.3
Q ss_pred CEEEEECCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcC
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGA-AKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECT 276 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~-~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~ 276 (332)
.+|.|+|+|.+|.+.+..++..|. .+|+++++++++.+.+++.|...... .+..+.+ ..+|+||.|+
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~------~~aDvViiav 74 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV------KGADLVILCV 74 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh------cCCCEEEECC
Confidence 579999999999999998888884 37999999999888888887532211 1111112 2589999999
Q ss_pred CChHH---HHHHHHHhccCCcEEEEEcCCC
Q 043260 277 GVASL---ISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 277 g~~~~---~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
..... +......++++ ..++.+|...
T Consensus 75 p~~~~~~v~~~l~~~l~~~-~iv~dvgs~k 103 (307)
T PRK07502 75 PVGASGAVAAEIAPHLKPG-AIVTDVGSVK 103 (307)
T ss_pred CHHHHHHHHHHHHhhCCCC-CEEEeCccch
Confidence 87422 33344455665 6777776543
No 203
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.68 E-value=0.028 Score=52.59 Aligned_cols=103 Identities=15% Similarity=0.167 Sum_probs=70.8
Q ss_pred CCCCEEEEECCChHHHHHHHHH-HHcCCCeEEEEcCCcchHHHH-HH----cCCCeeeCCCCCCCchHHHHHHHhcCCCC
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRA-RIQGAAKIIGIDKNPCRKDKG-EA----FGMTDFINPDDEPNKSISELVKEMTHGTG 268 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la-~~~G~~~Vi~~~~~~~~~~~~-~~----lga~~v~~~~~~~~~~~~~~~~~~~~~~g 268 (332)
+..++++|+|+|..|...+..+ ...++++|.++++++++.+.+ ++ ++.. +... .+..+.+ ..
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~-----~~~~~~~------~~ 192 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV-----NSADEAI------EE 192 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe-----CCHHHHH------hc
Confidence 4567899999999998777554 456888999999998886533 33 3433 2112 2233333 25
Q ss_pred ccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChH
Q 043260 269 VDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFP 312 (332)
Q Consensus 269 ~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~ 312 (332)
.|+|+.|+++...+- . ++++++ -+++.+|.......+++..
T Consensus 193 aDiVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~p~~~E~~~~ 233 (325)
T PRK08618 193 ADIIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFMPDMQELPSE 233 (325)
T ss_pred CCEEEEccCCCCcch-H-HhcCCC-cEEEecCCCCcccccCCHH
Confidence 899999999864433 3 899997 8999999876545556653
No 204
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.67 E-value=0.0067 Score=55.55 Aligned_cols=76 Identities=12% Similarity=0.048 Sum_probs=52.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCCCe-eeCCCCCCCchHHHHHHHhcCCCCccEEE
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGMTD-FINPDDEPNKSISELVKEMTHGTGVDYGF 273 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~-v~~~~~~~~~~~~~~~~~~~~~~g~d~vi 273 (332)
.+++++|+|+|+.+.+++..+...|+++|+++.|+.+|.+.+ .+++... +.... .. +.+.... ..+|+||
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~-~~~~~~~--~~~DiVI 195 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GD-SGGLAIE--KAAEVLV 195 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----ch-hhhhhcc--cCCCEEE
Confidence 578899999999999999999999998999999998876644 4443211 11110 00 1121221 2589999
Q ss_pred EcCCCh
Q 043260 274 ECTGVA 279 (332)
Q Consensus 274 d~~g~~ 279 (332)
+|++..
T Consensus 196 naTp~g 201 (282)
T TIGR01809 196 STVPAD 201 (282)
T ss_pred ECCCCC
Confidence 998864
No 205
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.66 E-value=0.0062 Score=53.18 Aligned_cols=103 Identities=19% Similarity=0.383 Sum_probs=68.0
Q ss_pred HHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHH----HHcCCCee--eCCCCCCCchHHHHH
Q 043260 188 AWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGA-AKIIGIDKNPCRKDKG----EAFGMTDF--INPDDEPNKSISELV 260 (332)
Q Consensus 188 l~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~-~~Vi~~~~~~~~~~~~----~~lga~~v--~~~~~~~~~~~~~~~ 260 (332)
+.+...+++|++||-+|+|. |..++.+++..|. .+|+.+++.++-.+.+ +++|.+.+ +..+. .
T Consensus 64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg-----~---- 133 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG-----S---- 133 (209)
T ss_dssp HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G-----G----
T ss_pred HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch-----h----
Confidence 34677899999999999977 8888888888874 3588999887644443 44565432 22211 1
Q ss_pred HHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEE-EcC
Q 043260 261 KEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMA-IGA 301 (332)
Q Consensus 261 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~-~G~ 301 (332)
.-+.....||.|+-+.+.+..-...++.|+++ |+++. ++.
T Consensus 134 ~g~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~pi~~ 174 (209)
T PF01135_consen 134 EGWPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAPIGQ 174 (209)
T ss_dssp GTTGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEEESS
T ss_pred hccccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEEEcc
Confidence 11112236999999888876678999999998 99887 554
No 206
>PRK08017 oxidoreductase; Provisional
Probab=96.66 E-value=0.011 Score=52.61 Aligned_cols=77 Identities=21% Similarity=0.333 Sum_probs=54.6
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeee-CCCCCCCchHHH---HHHHhcCCCCccEE
Q 043260 198 SSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFI-NPDDEPNKSISE---LVKEMTHGTGVDYG 272 (332)
Q Consensus 198 ~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~---~~~~~~~~~g~d~v 272 (332)
+++||+|+ |.+|..+++.+...|. +|++++++.++.+.+++.+.+.+. |..+ .+++.+ .+.+..++ .+|.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~-~~~~i 78 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDN-RLYGL 78 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCC-CCeEE
Confidence 57999998 9999999999999998 899999999888877777765432 3332 122222 22222323 68999
Q ss_pred EEcCCC
Q 043260 273 FECTGV 278 (332)
Q Consensus 273 id~~g~ 278 (332)
+.+.|.
T Consensus 79 i~~ag~ 84 (256)
T PRK08017 79 FNNAGF 84 (256)
T ss_pred EECCCC
Confidence 998774
No 207
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.011 Score=53.51 Aligned_cols=79 Identities=19% Similarity=0.220 Sum_probs=52.7
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCCCeee--CCCCCCCchHHHHHHHhcCC-CCccE
Q 043260 197 GSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGMTDFI--NPDDEPNKSISELVKEMTHG-TGVDY 271 (332)
Q Consensus 197 g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v~--~~~~~~~~~~~~~~~~~~~~-~g~d~ 271 (332)
++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++...++ |..+ .+++.+.+.+.... .+.|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 578999998 9999999998888999 899999988776543 444422222 3332 33433333332111 26899
Q ss_pred EEEcCCC
Q 043260 272 GFECTGV 278 (332)
Q Consensus 272 vid~~g~ 278 (332)
+|++.|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9999874
No 208
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.011 Score=52.94 Aligned_cols=80 Identities=20% Similarity=0.325 Sum_probs=53.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCCCee-eCCCCCCCchHHHHHHHhcC-CCCccE
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGMTDF-INPDDEPNKSISELVKEMTH-GTGVDY 271 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~~~~~~~-~~g~d~ 271 (332)
+|++++|+|+ |++|..+++.+...|+ +|+++++++.+.+.. .+++...+ .|..+ .+++.+.+.+... ..++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 5789999998 9999999999999998 899999887765543 44544322 23332 2333333332211 125899
Q ss_pred EEEcCCC
Q 043260 272 GFECTGV 278 (332)
Q Consensus 272 vid~~g~ 278 (332)
+|.++|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 209
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.64 E-value=0.022 Score=51.64 Aligned_cols=105 Identities=17% Similarity=0.201 Sum_probs=62.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcch-------------------HH----HHHHcCCC-eeeCCCCC
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCR-------------------KD----KGEAFGMT-DFINPDDE 251 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~-------------------~~----~~~~lga~-~v~~~~~~ 251 (332)
...+|+|+|+|++|..++..+...|..+++++|.+... .+ .+.++..+ .+....+.
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 45789999999999999999999998899999865321 11 11222222 12111110
Q ss_pred CCchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 252 PNKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 252 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
.. .+.+.++.. ..+|+||||..+...-..+.+.+...+-.++..|..++
T Consensus 109 i~---~e~~~~ll~-~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag~ 157 (268)
T PRK15116 109 IT---PDNVAEYMS-AGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGG 157 (268)
T ss_pred cC---hhhHHHHhc-CCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCccc
Confidence 00 112223332 26999999999854544455555554245676666554
No 210
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.63 E-value=0.03 Score=50.95 Aligned_cols=105 Identities=16% Similarity=0.246 Sum_probs=66.3
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHcCCCeEEEEcCCcc---hHH-HHHHcCCCeee--CCCCCCCchHHHHHHHhcCC
Q 043260 196 KGSSVAVFGL---GAVGLGVMDRARIQGAAKIIGIDKNPC---RKD-KGEAFGMTDFI--NPDDEPNKSISELVKEMTHG 266 (332)
Q Consensus 196 ~g~~vlV~G~---g~vG~~~~~la~~~G~~~Vi~~~~~~~---~~~-~~~~lga~~v~--~~~~~~~~~~~~~~~~~~~~ 266 (332)
.++++||+|+ +++|.++++.+...|+ +|++++++++ +.+ ..++++....+ |..+ .++..+.+.+....
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~ 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence 4788999987 4899999999999999 8999888753 222 22445543332 3332 33444434333211
Q ss_pred -CCccEEEEcCCCh--------------H---------------HHHHHHHHhccCCcEEEEEcCCCC
Q 043260 267 -TGVDYGFECTGVA--------------S---------------LISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 267 -~g~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
..+|++|++.|.. + ..+..+..+.++ |+++.+++..+
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~~ 147 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLGG 147 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCCC
Confidence 2589999998841 0 124455566676 89998876554
No 211
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.63 E-value=0.012 Score=58.29 Aligned_cols=74 Identities=19% Similarity=0.234 Sum_probs=55.7
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEE
Q 043260 193 KVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYG 272 (332)
Q Consensus 193 ~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~v 272 (332)
.+.++++|+|+|.|..|++++++++..|+ +|+++|.++++.+.++++|...+ .... ..+.+ ..+|+|
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~~~-----~~~~l------~~~D~V 74 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-STSD-----AVQQI------ADYALV 74 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cCcc-----hHhHh------hcCCEE
Confidence 35678999999999999999999999998 99999987766666777787433 2211 11112 247999
Q ss_pred EEcCCCh
Q 043260 273 FECTGVA 279 (332)
Q Consensus 273 id~~g~~ 279 (332)
|.+.|.+
T Consensus 75 V~SpGi~ 81 (488)
T PRK03369 75 VTSPGFR 81 (488)
T ss_pred EECCCCC
Confidence 9999875
No 212
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.60 E-value=0.0032 Score=57.35 Aligned_cols=98 Identities=16% Similarity=0.245 Sum_probs=61.3
Q ss_pred HHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----HcCCC-ee-eCCCCCCCchHHHHHH
Q 043260 188 AWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE----AFGMT-DF-INPDDEPNKSISELVK 261 (332)
Q Consensus 188 l~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~v-~~~~~~~~~~~~~~~~ 261 (332)
+.+.+++++|++||-+|+|- |-.+..+++..|+ +|++++.+++..+.++ +.|.. .+ +...+ + +
T Consensus 54 ~~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D-----~----~ 122 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD-----Y----R 122 (273)
T ss_dssp HHTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES------G----G
T ss_pred HHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee-----c----c
Confidence 45788999999999999974 7777788888899 9999999998887654 45642 11 11111 1 2
Q ss_pred HhcCCCCccEEEEc-----CCC---hHHHHHHHHHhccCCcEEEEE
Q 043260 262 EMTHGTGVDYGFEC-----TGV---ASLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 262 ~~~~~~g~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~ 299 (332)
++.. .||.|+.. +|. +..+..+.+.|+|+ |++++-
T Consensus 123 ~~~~--~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq 165 (273)
T PF02353_consen 123 DLPG--KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQ 165 (273)
T ss_dssp G-----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEE
T ss_pred ccCC--CCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 2222 79998763 432 24578999999998 998743
No 213
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.59 E-value=0.016 Score=52.72 Aligned_cols=106 Identities=15% Similarity=0.215 Sum_probs=75.4
Q ss_pred hHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----HcCCC-e--eeCCCCCCCchH
Q 043260 184 GFGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE----AFGMT-D--FINPDDEPNKSI 256 (332)
Q Consensus 184 a~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~--v~~~~~~~~~~~ 256 (332)
++..+.+..++++|++||=+|+|- |.+++.+|+..|+ +|+.++.|++..+.++ +.|.. . +...+
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d------- 130 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD------- 130 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc-------
Confidence 344456888999999999999987 8888899999998 9999999999877554 45654 1 21111
Q ss_pred HHHHHHhcCCCCccEEEE-----cCCC---hHHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 257 SELVKEMTHGTGVDYGFE-----CTGV---ASLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 257 ~~~~~~~~~~~g~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
.++.. + .||-|+. .+|. ++-+..+.+.|+++ |++++-.....
T Consensus 131 ---~rd~~-e-~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~ 180 (283)
T COG2230 131 ---YRDFE-E-PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGP 180 (283)
T ss_pred ---ccccc-c-ccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCC
Confidence 11122 2 2777764 3443 34578899999998 99887765543
No 214
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.58 E-value=0.022 Score=52.04 Aligned_cols=95 Identities=18% Similarity=0.261 Sum_probs=66.9
Q ss_pred hcccchhhhHHHHHHhhC-CCCCCEEEEECCCh-HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCC
Q 043260 176 FLSCGYSSGFGAAWKEFK-VEKGSSVAVFGLGA-VGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPN 253 (332)
Q Consensus 176 ~l~~~~~ta~~al~~~~~-~~~g~~vlV~G~g~-vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 253 (332)
.+||+....+..+ +..+ --.|++++|+|.|. +|.-++.++...|+ +|+++.+..
T Consensus 137 ~~PcTp~ai~~ll-~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------- 192 (286)
T PRK14175 137 FVPCTPLGIMEIL-KHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------- 192 (286)
T ss_pred CCCCcHHHHHHHH-HHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------
Confidence 4555544444433 4333 35789999999955 99999999999998 888886432
Q ss_pred chHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 254 KSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 254 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
.++ .+.+ +.+|+||.++|.+..+.. +.++++ ..++.+|...
T Consensus 193 ~~l----~~~~--~~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~ 233 (286)
T PRK14175 193 KDM----ASYL--KDADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP 233 (286)
T ss_pred hhH----HHHH--hhCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence 112 2222 258999999999766554 468887 8999999865
No 215
>PLN00203 glutamyl-tRNA reductase
Probab=96.55 E-value=0.023 Score=56.45 Aligned_cols=97 Identities=19% Similarity=0.239 Sum_probs=64.6
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCCCee--eCCCCCCCchHHHHHHHhcCCCCccEEE
Q 043260 197 GSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGMTDF--INPDDEPNKSISELVKEMTHGTGVDYGF 273 (332)
Q Consensus 197 g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v--~~~~~~~~~~~~~~~~~~~~~~g~d~vi 273 (332)
+.+|+|+|+|.+|.+++..+...|+++|+++.++.++.+.+ .+++...+ ... ++. .+.. ..+|+||
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~-----~dl----~~al--~~aDVVI 334 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPL-----DEM----LACA--AEADVVF 334 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecH-----hhH----HHHH--hcCCEEE
Confidence 68899999999999999999999987899999998887644 44542211 111 122 2222 2589999
Q ss_pred EcCCChHH--HHHHHHHhcc----CCc--EEEEEcCCCC
Q 043260 274 ECTGVASL--ISEALEATKL----GKG--KVMAIGAANE 304 (332)
Q Consensus 274 d~~g~~~~--~~~~~~~l~~----~~G--~~v~~G~~~~ 304 (332)
.+++.+.. ....++.+.+ .+. .++.++.+.+
T Consensus 335 sAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPRd 373 (519)
T PLN00203 335 TSTSSETPLFLKEHVEALPPASDTVGGKRLFVDISVPRN 373 (519)
T ss_pred EccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCCC
Confidence 99987533 2344444422 101 5888898865
No 216
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.039 Score=48.29 Aligned_cols=80 Identities=20% Similarity=0.203 Sum_probs=50.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHH-HH---HHcCCCee-eCCCCCCCchHHHHHHHhcCC-CC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKD-KG---EAFGMTDF-INPDDEPNKSISELVKEMTHG-TG 268 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~-~~---~~lga~~v-~~~~~~~~~~~~~~~~~~~~~-~g 268 (332)
+++++||+|+ |.+|..+++.+...|+ +|++++++.++.+ .+ +..+...+ .|..+ .+++.+.+.+.... .+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 4789999998 9999999999988899 8999999776543 22 22333222 22222 23333333322111 16
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
+|+||.+.+.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 8999998774
No 217
>PRK08589 short chain dehydrogenase; Validated
Probab=96.55 E-value=0.032 Score=50.46 Aligned_cols=79 Identities=16% Similarity=0.254 Sum_probs=50.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHH-HHHH---cCCC-ee--eCCCCCCCchHHHHHHHhcCC-
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKD-KGEA---FGMT-DF--INPDDEPNKSISELVKEMTHG- 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~-~~~~---lga~-~v--~~~~~~~~~~~~~~~~~~~~~- 266 (332)
+++++||+|+ +++|...++.+...|+ +|++++++ ++.+ .+++ .+.. .. .|..+ .++..+.+.+....
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQF 80 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHc
Confidence 5789999998 9999999998888999 99999988 4433 3333 3322 12 23332 23333333332111
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
...|++|++.|.
T Consensus 81 g~id~li~~Ag~ 92 (272)
T PRK08589 81 GRVDVLFNNAGV 92 (272)
T ss_pred CCcCEEEECCCC
Confidence 158999998874
No 218
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.54 E-value=0.014 Score=52.41 Aligned_cols=80 Identities=14% Similarity=0.209 Sum_probs=53.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-HcCCC-eee--CCCCCCCchHHHHHHHhcC-CCCc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-AFGMT-DFI--NPDDEPNKSISELVKEMTH-GTGV 269 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~-~v~--~~~~~~~~~~~~~~~~~~~-~~g~ 269 (332)
+++++||+|+ +++|..+++.+...|+ +|+++++++++.+.+. +++.. ..+ |..+ .++..+.+.+... -..+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS--YADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHhcCCC
Confidence 5788999998 9999999999999999 8999999887776554 34432 222 2222 2333333333211 1258
Q ss_pred cEEEEcCCC
Q 043260 270 DYGFECTGV 278 (332)
Q Consensus 270 d~vid~~g~ 278 (332)
|++|++.|.
T Consensus 82 d~li~~ag~ 90 (263)
T PRK06200 82 DCFVGNAGI 90 (263)
T ss_pred CEEEECCCC
Confidence 999999873
No 219
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.016 Score=52.18 Aligned_cols=106 Identities=19% Similarity=0.230 Sum_probs=67.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-Hc----CCC-eee--CCCCCCCchHHHHHHHhcCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-AF----GMT-DFI--NPDDEPNKSISELVKEMTHG 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~l----ga~-~v~--~~~~~~~~~~~~~~~~~~~~ 266 (332)
.|+++||+|+ +++|.++++.+...|+ +|++++++.++.+.+. ++ +.+ ..+ |..+ .++..+.+.+...-
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence 4788999998 9999999999999999 8999999887765332 22 322 122 3332 33444444433211
Q ss_pred CCccEEEEcCCCh----------H---------------HHHHHHHHhccC-CcEEEEEcCCCC
Q 043260 267 TGVDYGFECTGVA----------S---------------LISEALEATKLG-KGKVMAIGAANE 304 (332)
Q Consensus 267 ~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~-~G~~v~~G~~~~ 304 (332)
.++|+++++.|.. + ..+.++..+... .|+++.+++...
T Consensus 84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~ 147 (263)
T PRK08339 84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI 147 (263)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc
Confidence 2589999998742 0 123445555332 288999887654
No 220
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.012 Score=52.56 Aligned_cols=82 Identities=18% Similarity=0.199 Sum_probs=54.4
Q ss_pred hCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH-cCCC--eee--CCCCCCCchHHHHHH---H
Q 043260 192 FKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA-FGMT--DFI--NPDDEPNKSISELVK---E 262 (332)
Q Consensus 192 ~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~--~v~--~~~~~~~~~~~~~~~---~ 262 (332)
...-+++++||+|+ |.+|..+++.+...|. +|++++++.+..+.+.+ .... .++ |..+ .+++.+.+. +
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~ 82 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD--PAQVERVFDTAVE 82 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC--HHHHHHHHHHHHH
Confidence 34457789999998 9999999999999999 89999998776654433 2211 222 3322 233332222 2
Q ss_pred hcCCCCccEEEEcCCC
Q 043260 263 MTHGTGVDYGFECTGV 278 (332)
Q Consensus 263 ~~~~~g~d~vid~~g~ 278 (332)
..+ ++|+||.+.|.
T Consensus 83 ~~~--~~d~vi~~ag~ 96 (264)
T PRK12829 83 RFG--GLDVLVNNAGI 96 (264)
T ss_pred HhC--CCCEEEECCCC
Confidence 222 68999998875
No 221
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.53 E-value=0.0079 Score=52.69 Aligned_cols=101 Identities=19% Similarity=0.267 Sum_probs=67.4
Q ss_pred HHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHH----HcCCCe--eeCCCCCCCchHHHHH
Q 043260 188 AWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGA-AKIIGIDKNPCRKDKGE----AFGMTD--FINPDDEPNKSISELV 260 (332)
Q Consensus 188 l~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lga~~--v~~~~~~~~~~~~~~~ 260 (332)
+.+...++++++||-+|+|. |..++.+++..+. .+|+.++.+++-.+.++ ++|.+. ++..+. .+
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~------~~-- 139 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDG------TQ-- 139 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCc------cc--
Confidence 33566789999999999876 6777777777653 36999999988776554 345432 222111 11
Q ss_pred HHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEE
Q 043260 261 KEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 261 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 299 (332)
.......||+|+-..........+.+.|+++ |++++.
T Consensus 140 -~~~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 140 -GWEPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred -CCcccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 1111236999987655555667888999998 998764
No 222
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.52 E-value=0.02 Score=49.70 Aligned_cols=35 Identities=23% Similarity=0.300 Sum_probs=31.9
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCC
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKN 230 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~ 230 (332)
...+|+|+|+|++|..+++.+..+|+.+++++|.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45779999999999999999999999899999976
No 223
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.031 Score=49.94 Aligned_cols=80 Identities=19% Similarity=0.232 Sum_probs=51.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH---cCCC-eee--CCCCCCCchHHHHHHHhcCC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA---FGMT-DFI--NPDDEPNKSISELVKEMTHG-T 267 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~---lga~-~v~--~~~~~~~~~~~~~~~~~~~~-~ 267 (332)
+++++||+|+ |++|..+++.+...|+ +|+++++++++.+..++ .+.. ..+ |..+ .+++.+.+.+.... .
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 82 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD--DAQCRDAVEQTVAKFG 82 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhcC
Confidence 4678999998 9999999999888998 88888888876644433 3432 122 2222 23333333332211 2
Q ss_pred CccEEEEcCCC
Q 043260 268 GVDYGFECTGV 278 (332)
Q Consensus 268 g~d~vid~~g~ 278 (332)
++|++|.++|.
T Consensus 83 ~id~vi~~ag~ 93 (258)
T PRK08628 83 RIDGLVNNAGV 93 (258)
T ss_pred CCCEEEECCcc
Confidence 68999999983
No 224
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.51 E-value=0.02 Score=53.01 Aligned_cols=106 Identities=12% Similarity=0.082 Sum_probs=73.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHH-cCCCeEEEEcCCcchHH-HHHHcCCC--eeeCCCCCCCchHHHHHHHhcCCCCcc
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARI-QGAAKIIGIDKNPCRKD-KGEAFGMT--DFINPDDEPNKSISELVKEMTHGTGVD 270 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~-~G~~~Vi~~~~~~~~~~-~~~~lga~--~v~~~~~~~~~~~~~~~~~~~~~~g~d 270 (332)
....+++|+|+|..|.+.++.+.. .+.++|.+.+++.++.+ ++.++... .+. . .+..+.+ .++|
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~-----~~~~~av------~~aD 190 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P-----LDGEAIP------EAVD 190 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E-----CCHHHHh------hcCC
Confidence 456789999999999998888864 67789999999988765 44444321 111 1 2233333 2689
Q ss_pred EEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHh
Q 043260 271 YGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIA 315 (332)
Q Consensus 271 ~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~ 315 (332)
+|+.++++...+-.. .++++ -++..+|......-+++..-+.
T Consensus 191 iVitaT~s~~Pl~~~--~~~~g-~hi~~iGs~~p~~~El~~~~~~ 232 (304)
T PRK07340 191 LVVTATTSRTPVYPE--AARAG-RLVVAVGAFTPDMAELAPRTVR 232 (304)
T ss_pred EEEEccCCCCceeCc--cCCCC-CEEEecCCCCCCcccCCHHHHh
Confidence 999999986554343 37887 8999999877656677765433
No 225
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.015 Score=51.79 Aligned_cols=83 Identities=20% Similarity=0.197 Sum_probs=53.3
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH----cCC-CeeeCCCCCCCchHHHHHHHhc-CCC
Q 043260 195 EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA----FGM-TDFINPDDEPNKSISELVKEMT-HGT 267 (332)
Q Consensus 195 ~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga-~~v~~~~~~~~~~~~~~~~~~~-~~~ 267 (332)
..+++++|+|+ |.+|..++..+...|+ +|++++++.++++.+.+ .+. ..++..+-...+++.+.+.+.. ...
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 35789999998 9999999999999999 89999998887654322 222 1222221111234433333221 112
Q ss_pred CccEEEEcCCC
Q 043260 268 GVDYGFECTGV 278 (332)
Q Consensus 268 g~d~vid~~g~ 278 (332)
.+|++|++.|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 58999999884
No 226
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.47 E-value=0.048 Score=47.29 Aligned_cols=47 Identities=36% Similarity=0.490 Sum_probs=40.0
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-HcCC
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-AFGM 242 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga 242 (332)
-.|++++|+|.|.+|..+++.+...|. +|++++++.++.+.++ .+|+
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~ 73 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGA 73 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCC
Confidence 467899999999999999999999999 9999999988776554 4464
No 227
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.023 Score=50.93 Aligned_cols=85 Identities=19% Similarity=0.274 Sum_probs=52.8
Q ss_pred CCCCCCEEEEECC-ChHHHHHHHHHHHcC-CCeEEEEcCCcch-HH-H---HHHcCC-C-eeeCCCCCCCchHHHHHHHh
Q 043260 193 KVEKGSSVAVFGL-GAVGLGVMDRARIQG-AAKIIGIDKNPCR-KD-K---GEAFGM-T-DFINPDDEPNKSISELVKEM 263 (332)
Q Consensus 193 ~~~~g~~vlV~G~-g~vG~~~~~la~~~G-~~~Vi~~~~~~~~-~~-~---~~~lga-~-~v~~~~~~~~~~~~~~~~~~ 263 (332)
.+..++++||+|+ |++|...++.+...| . +|+++++++++ ++ . +++.+. + +++..+-.+..+..+.+.+.
T Consensus 4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 82 (253)
T PRK07904 4 AVGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAA 82 (253)
T ss_pred ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHH
Confidence 3467789999998 999999998777775 7 99999988775 43 2 233343 1 22222211223333334433
Q ss_pred cCCCCccEEEEcCCC
Q 043260 264 THGTGVDYGFECTGV 278 (332)
Q Consensus 264 ~~~~g~d~vid~~g~ 278 (332)
....+.|++|.+.|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 322369999987765
No 228
>PRK09186 flagellin modification protein A; Provisional
Probab=96.46 E-value=0.051 Score=48.30 Aligned_cols=79 Identities=18% Similarity=0.323 Sum_probs=51.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHc----CCCe--e--eCCCCCCCchHHHHHHHhcC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAF----GMTD--F--INPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~l----ga~~--v--~~~~~~~~~~~~~~~~~~~~ 265 (332)
+++++||+|+ |.+|..++..+...|+ +|+++.+++++.+.+ .++ +... + .|..+ .+++.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence 5789999998 9999999999999999 899998887765433 222 3221 1 23332 3344444443211
Q ss_pred -CCCccEEEEcCC
Q 043260 266 -GTGVDYGFECTG 277 (332)
Q Consensus 266 -~~g~d~vid~~g 277 (332)
-.++|++|++.+
T Consensus 80 ~~~~id~vi~~A~ 92 (256)
T PRK09186 80 KYGKIDGAVNCAY 92 (256)
T ss_pred HcCCccEEEECCc
Confidence 125899999885
No 229
>PRK06398 aldose dehydrogenase; Validated
Probab=96.45 E-value=0.0095 Score=53.49 Aligned_cols=75 Identities=15% Similarity=0.244 Sum_probs=48.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCe-eeCCCCCCCchHHHHHHHhcCC-CCccEE
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTD-FINPDDEPNKSISELVKEMTHG-TGVDYG 272 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~~~~~~~~-~g~d~v 272 (332)
.|+++||+|+ +++|.+++..+...|+ +|+++++++++.. .... ..|..+ .+++.+.+.+.... ..+|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~--~~~i~~~~~~~~~~~~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN--KEQVIKGIDYVISKYGRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4689999998 9999999999999999 9999988765432 1111 123332 23333333332111 258999
Q ss_pred EEcCCC
Q 043260 273 FECTGV 278 (332)
Q Consensus 273 id~~g~ 278 (332)
|++.|.
T Consensus 77 i~~Ag~ 82 (258)
T PRK06398 77 VNNAGI 82 (258)
T ss_pred EECCCC
Confidence 998874
No 230
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.45 E-value=0.03 Score=45.59 Aligned_cols=99 Identities=20% Similarity=0.229 Sum_probs=58.4
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcc-------------------hHH----HHHHcCCC-eeeCCCCCCCc
Q 043260 199 SVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPC-------------------RKD----KGEAFGMT-DFINPDDEPNK 254 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~-------------------~~~----~~~~lga~-~v~~~~~~~~~ 254 (332)
+|+|+|+|++|...+..+...|.+++.++|.+.- |.+ .++++... .+.....
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~---- 76 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPE---- 76 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEee----
Confidence 4899999999999999999999989999986521 111 12223321 1111111
Q ss_pred hHHH-HHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 255 SISE-LVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 255 ~~~~-~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
.+.+ ...+.. .++|+||+|..+........+.+...+-.++..|..+
T Consensus 77 ~~~~~~~~~~~--~~~diVi~~~d~~~~~~~l~~~~~~~~i~~i~~~~~g 124 (143)
T cd01483 77 GISEDNLDDFL--DGVDLVIDAIDNIAVRRALNRACKELGIPVIDAGGLG 124 (143)
T ss_pred ecChhhHHHHh--cCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 1100 111222 2699999999986555555566665513455555543
No 231
>PRK06484 short chain dehydrogenase; Validated
Probab=96.44 E-value=0.037 Score=55.01 Aligned_cols=106 Identities=21% Similarity=0.308 Sum_probs=69.8
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-HcCCCee---eCCCCCCCchHHHHHHHhcCC-CC
Q 043260 195 EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-AFGMTDF---INPDDEPNKSISELVKEMTHG-TG 268 (332)
Q Consensus 195 ~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~v---~~~~~~~~~~~~~~~~~~~~~-~g 268 (332)
..|+++||+|+ +++|...++.+...|+ +|++++++.++.+.+. +++.... .|..+ .++..+.+.+.... ..
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGR 343 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 45788999998 9999999999999998 9999999887776544 4554321 23332 23343333332211 15
Q ss_pred ccEEEEcCCCh--------------------------HHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 269 VDYGFECTGVA--------------------------SLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 269 ~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
+|++|+++|.. ...+.++..+..+ |+++.+++..+
T Consensus 344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~~~ 404 (520)
T PRK06484 344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSIAS 404 (520)
T ss_pred CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECchhh
Confidence 89999988742 0133444555556 89999987654
No 232
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.019 Score=51.45 Aligned_cols=82 Identities=18% Similarity=0.281 Sum_probs=53.5
Q ss_pred CCCCCEEEEECC-C-hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH-----cCCCee--e--CCCCCCCchHHHHHHH
Q 043260 194 VEKGSSVAVFGL-G-AVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA-----FGMTDF--I--NPDDEPNKSISELVKE 262 (332)
Q Consensus 194 ~~~g~~vlV~G~-g-~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~-----lga~~v--~--~~~~~~~~~~~~~~~~ 262 (332)
+.+++++||+|+ | ++|.++++.+...|+ +|+++++++++++...+ +|...+ + |..+ .+++.+.+.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~ 90 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDA 90 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHH
Confidence 445789999987 6 799999999999999 89999988776653322 453332 2 3332 2333333332
Q ss_pred hcC-CCCccEEEEcCCC
Q 043260 263 MTH-GTGVDYGFECTGV 278 (332)
Q Consensus 263 ~~~-~~g~d~vid~~g~ 278 (332)
... ...+|++|++.|.
T Consensus 91 ~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 91 AVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHcCCCCEEEECCCC
Confidence 211 1258999999984
No 233
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.43 E-value=0.014 Score=49.04 Aligned_cols=104 Identities=23% Similarity=0.255 Sum_probs=69.4
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCC-CCC-C------------CchHHHHHHH
Q 043260 197 GSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINP-DDE-P------------NKSISELVKE 262 (332)
Q Consensus 197 g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~-~~~-~------------~~~~~~~~~~ 262 (332)
..+|+|+|+|.+|..++.+++.+|+ +++..+...++++..+..++..+... .+. . +......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 3679999999999999999999999 99999999988888888877544331 110 0 1333334444
Q ss_pred hcCCCCccEEEEcCC-----ChHH-HHHHHHHhccCCcEEEEEcCCCC
Q 043260 263 MTHGTGVDYGFECTG-----VASL-ISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 263 ~~~~~g~d~vid~~g-----~~~~-~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
... .+|+||.+.- .+.. ..+.++.++++ ..++.+....+
T Consensus 99 ~i~--~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~g 143 (168)
T PF01262_consen 99 FIA--PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQG 143 (168)
T ss_dssp HHH--H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGGT
T ss_pred HHh--hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecCC
Confidence 332 4799996322 1222 26788889987 88998876544
No 234
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.43 E-value=0.012 Score=52.73 Aligned_cols=79 Identities=24% Similarity=0.260 Sum_probs=52.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHc-CCC-eee--CCCCCCCchHHHHHHHhcCC-CCc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAF-GMT-DFI--NPDDEPNKSISELVKEMTHG-TGV 269 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga~-~v~--~~~~~~~~~~~~~~~~~~~~-~g~ 269 (332)
++++++|+|+ |++|..+++.+...|. +|++++++.++.+.+++. +.. ..+ |..+ .++..+.+.+.... ...
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 4788999998 9999999999999999 899999988776655443 322 112 3322 23333333332111 258
Q ss_pred cEEEEcCC
Q 043260 270 DYGFECTG 277 (332)
Q Consensus 270 d~vid~~g 277 (332)
|++|++.|
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999986
No 235
>PRK06128 oxidoreductase; Provisional
Probab=96.43 E-value=0.049 Score=50.07 Aligned_cols=105 Identities=17% Similarity=0.163 Sum_probs=63.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcch--H----HHHHHcCCCee-e--CCCCCCCchHHHHHHHhcC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCR--K----DKGEAFGMTDF-I--NPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~--~----~~~~~lga~~v-~--~~~~~~~~~~~~~~~~~~~ 265 (332)
.++++||+|+ |++|..++..+...|+ +|+++.++.+. . +.+++.|.... + |..+ .++..+.+.+...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 130 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD--EAFCRQLVERAVK 130 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHHHH
Confidence 5789999998 9999999999999999 88887654332 1 22334454322 2 2222 2333333332211
Q ss_pred -CCCccEEEEcCCCh--------------------------HHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 266 -GTGVDYGFECTGVA--------------------------SLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 266 -~~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
-.++|++|+++|.. ..++.++..+.++ |+++.+++...
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~~~ 195 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSIQS 195 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCccc
Confidence 12589999998741 0123444455666 89998877654
No 236
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.42 E-value=0.011 Score=54.02 Aligned_cols=44 Identities=20% Similarity=0.275 Sum_probs=38.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE 238 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~ 238 (332)
.+|++++|+|+|+.+.+++..++..|+.+|+++.|+.+|.+.+.
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La 167 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELA 167 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 35899999999999999999999999879999999998876543
No 237
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.42 E-value=0.021 Score=46.94 Aligned_cols=98 Identities=23% Similarity=0.232 Sum_probs=63.9
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHH-HHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEE
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDK-GEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGF 273 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vi 273 (332)
.++.+++|+|+|.+|...++.+...|..+|++++++.++.+. +++++... +.... .+.. +. -.++|+|+
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~---~~~~----~~--~~~~Dvvi 86 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAY---LDLE----EL--LAEADLII 86 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceee---cchh----hc--cccCCEEE
Confidence 457889999999999999998888864489999998877654 45555431 00000 1111 11 13689999
Q ss_pred EcCCChHH----HHHHHHHhccCCcEEEEEcCCC
Q 043260 274 ECTGVASL----ISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 274 d~~g~~~~----~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
.+++.... .......++++ ..++.++...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~~~ 119 (155)
T cd01065 87 NTTPVGMKPGDELPLPPSLLKPG-GVVYDVVYNP 119 (155)
T ss_pred eCcCCCCCCCCCCCCCHHHcCCC-CEEEEcCcCC
Confidence 99987532 11223456776 7777786554
No 238
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.41 E-value=0.048 Score=48.49 Aligned_cols=104 Identities=17% Similarity=0.270 Sum_probs=75.5
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHc----CCCe--eeCCCCCCCchHHHHHHHh
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAF----GMTD--FINPDDEPNKSISELVKEM 263 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga~~--v~~~~~~~~~~~~~~~~~~ 263 (332)
......+|++||=+++|. |-++..+++..|-.+|+++|.++.-++.+++- |... .+..+ ++.+.
T Consensus 45 ~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~d-------Ae~LP-- 114 (238)
T COG2226 45 SLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGD-------AENLP-- 114 (238)
T ss_pred HhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEec-------hhhCC--
Confidence 445566899999998876 89999999999877999999999888766542 2221 11111 11221
Q ss_pred cCCCCccEEEEcCCC------hHHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 264 THGTGVDYGFECTGV------ASLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 264 ~~~~g~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
.+...||+|.-+.|- +..+.++.+-|+|+ |+++.+-....
T Consensus 115 f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 115 FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 344589999987774 25789999999998 99998877653
No 239
>PRK06196 oxidoreductase; Provisional
Probab=96.39 E-value=0.021 Score=52.98 Aligned_cols=80 Identities=19% Similarity=0.292 Sum_probs=52.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCCCeee--CCCCCCCchHHHHHHHhcC-CCCcc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGMTDFI--NPDDEPNKSISELVKEMTH-GTGVD 270 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v~--~~~~~~~~~~~~~~~~~~~-~~g~d 270 (332)
.++++||+|+ |++|..++..+...|. +|++++++.++.+.+ .++..-..+ |..+ .+++.+.+.+... ..++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence 4678999998 9999999999988999 899999988766533 333211222 3322 2333333333221 12689
Q ss_pred EEEEcCCC
Q 043260 271 YGFECTGV 278 (332)
Q Consensus 271 ~vid~~g~ 278 (332)
++|+++|.
T Consensus 102 ~li~nAg~ 109 (315)
T PRK06196 102 ILINNAGV 109 (315)
T ss_pred EEEECCCC
Confidence 99999873
No 240
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.058 Score=47.70 Aligned_cols=75 Identities=13% Similarity=0.098 Sum_probs=49.5
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCC-ee--eCCCCCCCchHHHHHHHhcCCCCccEEE
Q 043260 198 SSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMT-DF--INPDDEPNKSISELVKEMTHGTGVDYGF 273 (332)
Q Consensus 198 ~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~-~v--~~~~~~~~~~~~~~~~~~~~~~g~d~vi 273 (332)
.+++|+|+ |++|...+..+...|+ +|+++++++++++.+.+.+.. .. .|..+ .+++.+.+.+.. . ..|.++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~-~-~~d~~i 76 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQLP-F-IPELWI 76 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhcc-c-CCCEEE
Confidence 46899998 9999998888888999 899999988877655443321 22 23322 344444444432 2 467777
Q ss_pred EcCC
Q 043260 274 ECTG 277 (332)
Q Consensus 274 d~~g 277 (332)
.+.|
T Consensus 77 ~~ag 80 (240)
T PRK06101 77 FNAG 80 (240)
T ss_pred EcCc
Confidence 7665
No 241
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.38 E-value=0.02 Score=52.01 Aligned_cols=80 Identities=15% Similarity=0.303 Sum_probs=51.1
Q ss_pred CCCEEEEECC-C--hHHHHHHHHHHHcCCCeEEEEcCCcchHH----HHHHcCCCeee--CCCCCCCchHHHHHHHhcCC
Q 043260 196 KGSSVAVFGL-G--AVGLGVMDRARIQGAAKIIGIDKNPCRKD----KGEAFGMTDFI--NPDDEPNKSISELVKEMTHG 266 (332)
Q Consensus 196 ~g~~vlV~G~-g--~vG~~~~~la~~~G~~~Vi~~~~~~~~~~----~~~~lga~~v~--~~~~~~~~~~~~~~~~~~~~ 266 (332)
+++++||+|+ + ++|.++++.+...|+ +|++++++++..+ +.+++|....+ |..+ .++..+.+.+....
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d--~~~v~~~~~~~~~~ 82 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED--IASVDAVFEALEKK 82 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC--HHHHHHHHHHHHHH
Confidence 5788999998 4 899999999999999 8999887653322 22344543332 3322 33343333332211
Q ss_pred -CCccEEEEcCCC
Q 043260 267 -TGVDYGFECTGV 278 (332)
Q Consensus 267 -~g~d~vid~~g~ 278 (332)
...|++|+++|.
T Consensus 83 ~g~iD~lVnnAG~ 95 (271)
T PRK06505 83 WGKLDFVVHAIGF 95 (271)
T ss_pred hCCCCEEEECCcc
Confidence 168999999873
No 242
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.37 E-value=0.043 Score=49.04 Aligned_cols=79 Identities=19% Similarity=0.244 Sum_probs=50.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH---cCCCe-e--eCCCCCCCchHHHHHHHhcC-CC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA---FGMTD-F--INPDDEPNKSISELVKEMTH-GT 267 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~---lga~~-v--~~~~~~~~~~~~~~~~~~~~-~~ 267 (332)
+++++||+|+ |++|.++++.+...|+ +|+++++++...+..++ .+.+. . .|..+ .++..+.+.+... -.
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence 4678999998 9999999999999998 89999887543333333 34332 1 23322 2333333333211 12
Q ss_pred CccEEEEcCC
Q 043260 268 GVDYGFECTG 277 (332)
Q Consensus 268 g~d~vid~~g 277 (332)
.+|++|+++|
T Consensus 84 ~id~lv~nAg 93 (260)
T PRK12823 84 RIDVLINNVG 93 (260)
T ss_pred CCeEEEECCc
Confidence 5899999987
No 243
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.37 E-value=0.031 Score=51.16 Aligned_cols=43 Identities=28% Similarity=0.251 Sum_probs=37.2
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG 237 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~ 237 (332)
..+++++|+|+|+.+.+++..+...|+++|++++|+.+|.+.+
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L 167 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL 167 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence 3478899999999999999988889998999999998876644
No 244
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.36 E-value=0.029 Score=51.55 Aligned_cols=37 Identities=22% Similarity=0.374 Sum_probs=32.5
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP 231 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~ 231 (332)
.++++++|+|+|++|.+++..+...|+++|++++++.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3578899999999999999988899996799999986
No 245
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.36 E-value=0.083 Score=45.44 Aligned_cols=104 Identities=17% Similarity=0.278 Sum_probs=64.1
Q ss_pred HHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH----cCCCe--eeCCCCCCCchHHHHHHH
Q 043260 189 WKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA----FGMTD--FINPDDEPNKSISELVKE 262 (332)
Q Consensus 189 ~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~~~~ 262 (332)
....+++++++||=+|+|. |..+..+++.....+|+++|.+++..+.+++ ++.+. ++.. +..+.+..
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~------d~~~~~~~ 105 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG------SAPECLAQ 105 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC------chHHHHhh
Confidence 3555778899998888855 5555566665433499999999988776543 55443 2222 12222222
Q ss_pred hcCCCCccE-EEEcCCC-hHHHHHHHHHhccCCcEEEEEcCC
Q 043260 263 MTHGTGVDY-GFECTGV-ASLISEALEATKLGKGKVMAIGAA 302 (332)
Q Consensus 263 ~~~~~g~d~-vid~~g~-~~~~~~~~~~l~~~~G~~v~~G~~ 302 (332)
+.. .+|. +++.... ...+..+.+.|+++ |+++.....
T Consensus 106 ~~~--~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~~ 144 (196)
T PRK07402 106 LAP--APDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATASS 144 (196)
T ss_pred CCC--CCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEeec
Confidence 222 2344 4443222 35678999999998 998888644
No 246
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.35 E-value=0.036 Score=49.48 Aligned_cols=80 Identities=15% Similarity=0.197 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCee-e--CCCCCCCchHHHHHHHhcC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTDF-I--NPDDEPNKSISELVKEMTH-G 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~v-~--~~~~~~~~~~~~~~~~~~~-~ 266 (332)
+++++||+|+ |.+|..+++.+...|. +|+++++++++.+.+ ++.+.+.. + |..+ .+++.+.+.+... -
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN--EDAVNAGIDKVAERF 82 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 4789999998 9999999999999999 899999888665432 33454322 2 2222 2222222222110 1
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
...|+||.+.|.
T Consensus 83 ~~~d~vi~~ag~ 94 (262)
T PRK13394 83 GSVDILVSNAGI 94 (262)
T ss_pred CCCCEEEECCcc
Confidence 258999999874
No 247
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=96.35 E-value=0.042 Score=49.37 Aligned_cols=99 Identities=20% Similarity=0.223 Sum_probs=68.3
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCC-eeeCCCCCCCchHHHHHHHhcCCCC
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMT-DFINPDDEPNKSISELVKEMTHGTG 268 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~~~~~~~~~g 268 (332)
....+.++++||=+|+|. |..+..+++..+..+|+++|.++.-.+.+++.-.. .++..+ . ..+.....
T Consensus 25 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d------~----~~~~~~~~ 93 (258)
T PRK01683 25 ARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD------I----ASWQPPQA 93 (258)
T ss_pred hhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc------h----hccCCCCC
Confidence 445667889999999876 67777888776544999999999888877664321 222221 1 11222337
Q ss_pred ccEEEEcCCC------hHHHHHHHHHhccCCcEEEEEc
Q 043260 269 VDYGFECTGV------ASLISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 269 ~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~G 300 (332)
+|+|+....- ...+..+.+.|+++ |.+++..
T Consensus 94 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 94 LDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred ccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 9999876542 24678899999998 9988753
No 248
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.014 Score=52.96 Aligned_cols=80 Identities=15% Similarity=0.199 Sum_probs=53.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCC--ee--eCCCCCCCchHHHHHHHhcCC-CCc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMT--DF--INPDDEPNKSISELVKEMTHG-TGV 269 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~--~v--~~~~~~~~~~~~~~~~~~~~~-~g~ 269 (332)
.++++||+|+ |++|..+++.+...|. +|+++++++++.+.+.+.... .. .|..+ .+++.+.+.+.... .++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPI 79 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 3578999998 9999999999988998 899999988877655543222 12 23322 23333333322111 258
Q ss_pred cEEEEcCCC
Q 043260 270 DYGFECTGV 278 (332)
Q Consensus 270 d~vid~~g~ 278 (332)
|+||++.|.
T Consensus 80 d~vv~~ag~ 88 (277)
T PRK06180 80 DVLVNNAGY 88 (277)
T ss_pred CEEEECCCc
Confidence 999999885
No 249
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.056 Score=48.78 Aligned_cols=77 Identities=18% Similarity=0.263 Sum_probs=49.4
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe----eeCCCCCCCchHHHHHHHhc-CCCC
Q 043260 199 SVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD----FINPDDEPNKSISELVKEMT-HGTG 268 (332)
Q Consensus 199 ~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~----v~~~~~~~~~~~~~~~~~~~-~~~g 268 (332)
+++|+|+ |++|..+++.+...|+ +|+++++++++.+.. +..+... ..|..+ .++..+.+.+.. ...+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence 6899998 9999999999999998 899999887765432 2334432 123333 222222222221 1125
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
+|++|++.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 8999999974
No 250
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.34 E-value=0.023 Score=51.05 Aligned_cols=107 Identities=15% Similarity=0.201 Sum_probs=64.8
Q ss_pred CCCEEEEECCC---hHHHHHHHHHHHcCCCeEEEEcCCcchHH----HHHHcCCCeeeCCCCCCCchHHHHHHHhcCC-C
Q 043260 196 KGSSVAVFGLG---AVGLGVMDRARIQGAAKIIGIDKNPCRKD----KGEAFGMTDFINPDDEPNKSISELVKEMTHG-T 267 (332)
Q Consensus 196 ~g~~vlV~G~g---~vG~~~~~la~~~G~~~Vi~~~~~~~~~~----~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~-~ 267 (332)
.|+++||+|++ ++|.++++.+...|+ +|++++++++..+ ..++++....+..+-.+.++..+.+.+.... .
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 57889999973 899999999999999 8999888754322 2233443233322211233343333332211 1
Q ss_pred CccEEEEcCCCh--------------H---------------HHHHHHHHhccCCcEEEEEcCCCC
Q 043260 268 GVDYGFECTGVA--------------S---------------LISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 268 g~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
..|++|+++|.. + ..+.++..++.+ |+++.+++...
T Consensus 88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-g~Ii~iss~~~ 152 (258)
T PRK07533 88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG-GSLLTMSYYGA 152 (258)
T ss_pred CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC-CEEEEEecccc
Confidence 589999998731 0 123455566666 88888876543
No 251
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.021 Score=50.79 Aligned_cols=80 Identities=16% Similarity=0.215 Sum_probs=52.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCe--ee--CCCCCCCchHHHHHHHhcC-CCCc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTD--FI--NPDDEPNKSISELVKEMTH-GTGV 269 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~--v~--~~~~~~~~~~~~~~~~~~~-~~g~ 269 (332)
+++++||+|+ |.+|..+++.+...|+ +|++++++++..+...++.... .+ |..+ .+++.+.+.+... -.++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~~ 90 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD--SQSVEAAVAAVISAFGRI 90 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4779999998 9999999999988998 8999998877655555443221 22 3222 2333333332211 1258
Q ss_pred cEEEEcCCC
Q 043260 270 DYGFECTGV 278 (332)
Q Consensus 270 d~vid~~g~ 278 (332)
|++|.++|.
T Consensus 91 d~vi~~ag~ 99 (255)
T PRK06841 91 DILVNSAGV 99 (255)
T ss_pred CEEEECCCC
Confidence 999999874
No 252
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.34 E-value=0.027 Score=49.86 Aligned_cols=82 Identities=22% Similarity=0.276 Sum_probs=51.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcch--HHHHHHcCCC-eeeCCCCCCCchHHHHHHHhcC-CCCcc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCR--KDKGEAFGMT-DFINPDDEPNKSISELVKEMTH-GTGVD 270 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~--~~~~~~lga~-~v~~~~~~~~~~~~~~~~~~~~-~~g~d 270 (332)
.++++||+|+ |++|..+++.+...|+ +|++++++... .+.+++.+.. .++..+-...+++...+.+... -.++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999998 9999999999999999 89999876521 2333444532 2222221123444433333221 12589
Q ss_pred EEEEcCCC
Q 043260 271 YGFECTGV 278 (332)
Q Consensus 271 ~vid~~g~ 278 (332)
++|++.|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99998874
No 253
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.021 Score=51.33 Aligned_cols=80 Identities=13% Similarity=0.108 Sum_probs=52.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-H---cCCC-ee--eCCCCCCCchHHHHHHHhcC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-A---FGMT-DF--INPDDEPNKSISELVKEMTH-G 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~---lga~-~v--~~~~~~~~~~~~~~~~~~~~-~ 266 (332)
+++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+. + .+.. .+ .|..+ .++..+.+.+... -
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH--PEATAGLAGQAVEAF 85 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 5789999998 9999999999999999 9999999887665332 2 2322 22 23332 2333322332211 1
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
.++|+||+++|.
T Consensus 86 ~~id~vi~~Ag~ 97 (263)
T PRK07814 86 GRLDIVVNNVGG 97 (263)
T ss_pred CCCCEEEECCCC
Confidence 268999998873
No 254
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.32 E-value=0.058 Score=48.44 Aligned_cols=105 Identities=14% Similarity=0.238 Sum_probs=63.3
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHcCCCeEEEEcCCc---chHH-HHHHc-CCC-ee--eCCCCCCCchHHHHHHHhc
Q 043260 196 KGSSVAVFGL---GAVGLGVMDRARIQGAAKIIGIDKNP---CRKD-KGEAF-GMT-DF--INPDDEPNKSISELVKEMT 264 (332)
Q Consensus 196 ~g~~vlV~G~---g~vG~~~~~la~~~G~~~Vi~~~~~~---~~~~-~~~~l-ga~-~v--~~~~~~~~~~~~~~~~~~~ 264 (332)
.|++++|+|+ +++|.++++.+...|+ +|++++++. ++++ +.+++ +.. .. .|..+ .++..+.+.+..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 82 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS--DEEITACFETIK 82 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC--HHHHHHHHHHHH
Confidence 4788999987 5999999999999999 898887653 2333 22333 222 12 23322 344444444332
Q ss_pred CC-CCccEEEEcCCCh--------------H---------------HHHHHHHHhccCCcEEEEEcCCCC
Q 043260 265 HG-TGVDYGFECTGVA--------------S---------------LISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 265 ~~-~g~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
.. ..+|+++++.|.. + ..+..+..+.++ |+++.+++..+
T Consensus 83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~Iv~isS~~~ 151 (257)
T PRK08594 83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG-GSIVTLTYLGG 151 (257)
T ss_pred HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC-ceEEEEcccCC
Confidence 21 2589999987631 0 112344456666 99998887654
No 255
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.32 E-value=0.025 Score=50.05 Aligned_cols=79 Identities=18% Similarity=0.230 Sum_probs=52.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe-e--eCCCCCCCchHHHHHHHhcCC-
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD-F--INPDDEPNKSISELVKEMTHG- 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~~~~~~~~- 266 (332)
+++++||+|+ |++|..+++.+...|. +|++++++.++.+.+ ++.+... . .|..+ .++..+.+.+....
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD--EEDVEATFAQIAEDF 80 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4789999998 9999999999999998 899999987765433 2334432 2 23222 23333333332211
Q ss_pred CCccEEEEcCC
Q 043260 267 TGVDYGFECTG 277 (332)
Q Consensus 267 ~g~d~vid~~g 277 (332)
.++|.||+++|
T Consensus 81 ~~id~vi~~ag 91 (253)
T PRK08217 81 GQLNGLINNAG 91 (253)
T ss_pred CCCCEEEECCC
Confidence 25899999987
No 256
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.028 Score=50.46 Aligned_cols=80 Identities=14% Similarity=0.260 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-Hc--CCC-eee--CCCCCCCchHHHHHHHhcCCCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-AF--GMT-DFI--NPDDEPNKSISELVKEMTHGTG 268 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~l--ga~-~v~--~~~~~~~~~~~~~~~~~~~~~g 268 (332)
++.++||+|+ |++|...+..+...|. +|+++++++++.+.+. ++ +.. ..+ |..+ .++..+.......-..
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS--EAGREAVLARAREMGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHhcCC
Confidence 4678999998 9999999999999998 8999999887765443 22 211 122 2222 2333222222211236
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
+|.++.++|.
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 8999999875
No 257
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.021 Score=50.90 Aligned_cols=80 Identities=15% Similarity=0.187 Sum_probs=52.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----HcCCCe-e--eCCCCCCCchHHHHHHHhcCC-
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE----AFGMTD-F--INPDDEPNKSISELVKEMTHG- 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-v--~~~~~~~~~~~~~~~~~~~~~- 266 (332)
.++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+. +.+.+. . .|..+ .+++.+.+.+....
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4788999998 9999999999999999 8999999887665332 223221 2 23322 23333333332111
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
.++|++|.+.|.
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 158999998874
No 258
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.30 E-value=0.034 Score=49.04 Aligned_cols=105 Identities=19% Similarity=0.198 Sum_probs=63.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchH-----H---HHHHcC---------------CCeeeCCCCCC
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRK-----D---KGEAFG---------------MTDFINPDDEP 252 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~-----~---~~~~lg---------------a~~v~~~~~~~ 252 (332)
+...|+|+|.|++|-+++..+.+.|++++.++|-++--. + +....| ...-+...+
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~-- 106 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN-- 106 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH--
Confidence 346799999999999999999999999999998654211 1 111112 111111111
Q ss_pred CchH-HHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 253 NKSI-SELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 253 ~~~~-~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
+-+ .+-+.++... +||+||||.-+-..=-.++....+.+-.++..+..++
T Consensus 107 -~f~t~en~~~~~~~-~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~ 157 (263)
T COG1179 107 -DFITEENLEDLLSK-GFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG 157 (263)
T ss_pred -hhhCHhHHHHHhcC-CCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence 111 1223444544 8999999998754444555544444256676665554
No 259
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.033 Score=48.65 Aligned_cols=77 Identities=19% Similarity=0.348 Sum_probs=53.3
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCe-eeCCCCCCCchHHHHHHHhcCCCCccEEEEc
Q 043260 198 SSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTD-FINPDDEPNKSISELVKEMTHGTGVDYGFEC 275 (332)
Q Consensus 198 ~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~ 275 (332)
++++|+|+ |.+|..+++.+...|+ +|++++++.++.+.++..+... ..|..+ .+++.+.+.+.. +.++|++|.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~-~~~~d~vi~~ 77 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLD-GEALDAAVYV 77 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhc-CCCCCEEEEC
Confidence 46899998 9999999998888898 8999999887777666665432 223333 233333333333 3369999998
Q ss_pred CCC
Q 043260 276 TGV 278 (332)
Q Consensus 276 ~g~ 278 (332)
.|.
T Consensus 78 ag~ 80 (222)
T PRK06953 78 AGV 80 (222)
T ss_pred CCc
Confidence 775
No 260
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.29 E-value=0.026 Score=51.38 Aligned_cols=70 Identities=20% Similarity=0.155 Sum_probs=50.2
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccE
Q 043260 193 KVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGMTDFINPDDEPNKSISELVKEMTHGTGVDY 271 (332)
Q Consensus 193 ~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~ 271 (332)
....+++++|+|+|+.+.+++..+...|+.+|+++.|+.+|.+.+ +.++.+ . . +.+ ....+|+
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~-----~---~~~----~~~~~dl 181 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----W-----R---PDL----GGIEADI 181 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----c-----h---hhc----ccccCCE
Confidence 344567899999999999999999999998899999998877644 344311 0 0 011 1125899
Q ss_pred EEEcCCC
Q 043260 272 GFECTGV 278 (332)
Q Consensus 272 vid~~g~ 278 (332)
||+|++.
T Consensus 182 vINaTp~ 188 (272)
T PRK12550 182 LVNVTPI 188 (272)
T ss_pred EEECCcc
Confidence 9998864
No 261
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.025 Score=51.97 Aligned_cols=80 Identities=18% Similarity=0.263 Sum_probs=52.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----HcCCC-eee--CCCCCCCchHHHHHHHhcC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE----AFGMT-DFI--NPDDEPNKSISELVKEMTH-G 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~~~~~~~-~ 266 (332)
.+++++|+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +.+.+ .++ |..+ .+++.+.+.+... -
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD--LDAVDALVADVEKRI 115 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4578999998 9999999999988998 9999999887765432 23332 122 2222 2333333332211 1
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
..+|++|+++|.
T Consensus 116 g~id~li~~AG~ 127 (293)
T PRK05866 116 GGVDILINNAGR 127 (293)
T ss_pred CCCCEEEECCCC
Confidence 158999999874
No 262
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.29 E-value=0.015 Score=52.98 Aligned_cols=97 Identities=20% Similarity=0.165 Sum_probs=71.3
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCee-eCCCCCCCchHHHHHHHhcCCCCccEEEEcC
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDF-INPDDEPNKSISELVKEMTHGTGVDYGFECT 276 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~ 276 (332)
.+|.|+|.|.+|.-++.+|..+|+ +|.+.+.+.+|++.+..+-...+ .-++. +.++.+.+ ..+|+||.++
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st--~~~iee~v------~~aDlvIgaV 239 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST--PSNIEEAV------KKADLVIGAV 239 (371)
T ss_pred ccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC--HHHHHHHh------hhccEEEEEE
Confidence 458888999999999999999999 99999999999988876433332 22221 24444433 2589999865
Q ss_pred CCh-----H-HHHHHHHHhccCCcEEEEEcCCCC
Q 043260 277 GVA-----S-LISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 277 g~~-----~-~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
=.+ . ..++..+.++|+ +.++.+....+
T Consensus 240 LIpgakaPkLvt~e~vk~MkpG-sVivDVAiDqG 272 (371)
T COG0686 240 LIPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQG 272 (371)
T ss_pred EecCCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence 322 1 357889999998 99999976655
No 263
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.29 E-value=0.024 Score=51.05 Aligned_cols=79 Identities=16% Similarity=0.258 Sum_probs=49.3
Q ss_pred CCCEEEEECC-C--hHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCeee--CCCCCCCchHHHHHHHhcCC
Q 043260 196 KGSSVAVFGL-G--AVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTDFI--NPDDEPNKSISELVKEMTHG 266 (332)
Q Consensus 196 ~g~~vlV~G~-g--~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~v~--~~~~~~~~~~~~~~~~~~~~ 266 (332)
.|++++|+|+ + ++|.++++.+...|+ +|++++++++..+.+ ++.|....+ |..+ .++..+.+.+....
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~~ 83 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKEK 83 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHHH
Confidence 5788999998 4 799999988888999 898887764222222 333543322 3332 34444444332221
Q ss_pred -CCccEEEEcCC
Q 043260 267 -TGVDYGFECTG 277 (332)
Q Consensus 267 -~g~d~vid~~g 277 (332)
..+|+++++.|
T Consensus 84 ~g~iDilVnnag 95 (260)
T PRK06603 84 WGSFDFLLHGMA 95 (260)
T ss_pred cCCccEEEEccc
Confidence 15899999887
No 264
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.027 Score=49.69 Aligned_cols=81 Identities=16% Similarity=0.106 Sum_probs=52.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe-eeCCCCCCCchHHHHHHHhcC--CC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD-FINPDDEPNKSISELVKEMTH--GT 267 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v~~~~~~~~~~~~~~~~~~~~--~~ 267 (332)
+|++++|+|+ +++|.+.+..+...|+ +|++++++.++++.+ ++.+.+. .+..+....++..+.+.+... +.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4788999998 9999999999988999 899999988776533 2345332 221111123444333333221 12
Q ss_pred CccEEEEcCC
Q 043260 268 GVDYGFECTG 277 (332)
Q Consensus 268 g~d~vid~~g 277 (332)
.+|++|++.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 5899999986
No 265
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.25 E-value=0.022 Score=53.11 Aligned_cols=81 Identities=20% Similarity=0.260 Sum_probs=53.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HH----cCCCe----eeCCCCCCCchHHHHHHHhcC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EA----FGMTD----FINPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~----lga~~----v~~~~~~~~~~~~~~~~~~~~ 265 (332)
.|++++|+|+ +++|.+.++.+...|+ +|+++++++++++.+ ++ .+... ..|..+ +..+..+.+.+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence 5889999998 9999999988888999 899999999887643 22 22111 123321 11233444555444
Q ss_pred CCCccEEEEcCCC
Q 043260 266 GTGVDYGFECTGV 278 (332)
Q Consensus 266 ~~g~d~vid~~g~ 278 (332)
+...|++++++|.
T Consensus 130 ~~didilVnnAG~ 142 (320)
T PLN02780 130 GLDVGVLINNVGV 142 (320)
T ss_pred CCCccEEEEecCc
Confidence 4456799998873
No 266
>PRK09242 tropinone reductase; Provisional
Probab=96.22 E-value=0.097 Score=46.66 Aligned_cols=80 Identities=11% Similarity=0.173 Sum_probs=52.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-Hc-----CCCe-ee--CCCCCCCchHHHHHHHhcC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-AF-----GMTD-FI--NPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~l-----ga~~-v~--~~~~~~~~~~~~~~~~~~~ 265 (332)
.++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+. ++ +.+. .+ |..+ .++..+.+.+...
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 84 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 4789999998 9999999999999999 8999998887655332 22 2221 12 3322 2333333332211
Q ss_pred -CCCccEEEEcCCC
Q 043260 266 -GTGVDYGFECTGV 278 (332)
Q Consensus 266 -~~g~d~vid~~g~ 278 (332)
-.++|++|.+.|.
T Consensus 85 ~~g~id~li~~ag~ 98 (257)
T PRK09242 85 HWDGLHILVNNAGG 98 (257)
T ss_pred HcCCCCEEEECCCC
Confidence 1258999999984
No 267
>PRK06484 short chain dehydrogenase; Validated
Probab=96.21 E-value=0.042 Score=54.60 Aligned_cols=80 Identities=21% Similarity=0.339 Sum_probs=55.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHH-HHHcCCCe---eeCCCCCCCchHHHHHHHhcCC-CCc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDK-GEAFGMTD---FINPDDEPNKSISELVKEMTHG-TGV 269 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~-~~~lga~~---v~~~~~~~~~~~~~~~~~~~~~-~g~ 269 (332)
+++++||+|+ +++|.++++.+...|+ +|++++++.++++. .++++... ..|..+ .+++.+.+.+.... .++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 5788999998 9999999999999999 99999998887654 45565432 223332 34444444332211 258
Q ss_pred cEEEEcCCC
Q 043260 270 DYGFECTGV 278 (332)
Q Consensus 270 d~vid~~g~ 278 (332)
|++|++.|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999999874
No 268
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.21 E-value=0.031 Score=52.52 Aligned_cols=36 Identities=22% Similarity=0.331 Sum_probs=32.1
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP 231 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~ 231 (332)
...+|+|+|+|++|..++..+..+|..+++++|.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 446799999999999999999999998999999864
No 269
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.21 E-value=0.011 Score=57.79 Aligned_cols=95 Identities=12% Similarity=0.113 Sum_probs=62.8
Q ss_pred HhhCCCCCCEEE----EECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCC-eeeCCCCCCCchHHHHHHHh
Q 043260 190 KEFKVEKGSSVA----VFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMT-DFINPDDEPNKSISELVKEM 263 (332)
Q Consensus 190 ~~~~~~~g~~vl----V~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~~~~~ 263 (332)
...+.++|+++| |+|+ |++|.+++|+++..|+ +|+.+...+.+....+..+.+ .+++... ..+.+.+..+
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~ 102 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKAL 102 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHH
Confidence 345778888887 8876 9999999999999999 899887666544333333444 3444443 2233333322
Q ss_pred cCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 264 THGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 264 ~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
. ..+...++.+.++ |+++.++....
T Consensus 103 ~---------------~~~~~~l~~l~~~-griv~i~s~~~ 127 (450)
T PRK08261 103 Y---------------EFFHPVLRSLAPC-GRVVVLGRPPE 127 (450)
T ss_pred H---------------HHHHHHHHhccCC-CEEEEEccccc
Confidence 1 3456677778887 88888887653
No 270
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.024 Score=50.49 Aligned_cols=81 Identities=12% Similarity=0.158 Sum_probs=51.3
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----HcCCC-eeeCCCCCCCchHHHHHHHhcC-CCCc
Q 043260 197 GSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE----AFGMT-DFINPDDEPNKSISELVKEMTH-GTGV 269 (332)
Q Consensus 197 g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~~~~~~~-~~g~ 269 (332)
|+++||+|+ |++|...++.+...|. +|+++++++++.+.+. +.+.. ..+..+-.+.+++.+.+.+... -..+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 468999998 9999999999999999 9999998877655332 22322 2222211112333333333211 1258
Q ss_pred cEEEEcCCC
Q 043260 270 DYGFECTGV 278 (332)
Q Consensus 270 d~vid~~g~ 278 (332)
|++|++.|.
T Consensus 80 d~lI~~ag~ 88 (252)
T PRK07677 80 DALINNAAG 88 (252)
T ss_pred cEEEECCCC
Confidence 999999873
No 271
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.19 E-value=0.037 Score=46.85 Aligned_cols=95 Identities=20% Similarity=0.347 Sum_probs=63.3
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCC--CeeeCCCCCCCchHHHHHHHhcCCCCccEEEE
Q 043260 198 SSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGM--TDFINPDDEPNKSISELVKEMTHGTGVDYGFE 274 (332)
Q Consensus 198 ~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid 274 (332)
.+|.|+|+ |-+|...++-|+..|. +|+++.+++.|....+..-. ..+++. ....+. + .|+|+||+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~-----~~~a~~---l---~g~DaVIs 68 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDL-----TSLASD---L---AGHDAVIS 68 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccCh-----hhhHhh---h---cCCceEEE
Confidence 36889998 9999999999999999 99999999988754321110 012221 111122 2 37999999
Q ss_pred cCCCh---------HHHHHHHHHhccC-CcEEEEEcCCCC
Q 043260 275 CTGVA---------SLISEALEATKLG-KGKVMAIGAANE 304 (332)
Q Consensus 275 ~~g~~---------~~~~~~~~~l~~~-~G~~v~~G~~~~ 304 (332)
+.+.. ...+.+++.|+.- --|++.+|..+.
T Consensus 69 A~~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS 108 (211)
T COG2910 69 AFGAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGS 108 (211)
T ss_pred eccCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence 88754 1234566667663 148888887654
No 272
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.063 Score=49.17 Aligned_cols=107 Identities=19% Similarity=0.192 Sum_probs=63.8
Q ss_pred CCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcch-HH----HHHHcCCCe-ee--CCCCCCCchHHHHHHHhc
Q 043260 194 VEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCR-KD----KGEAFGMTD-FI--NPDDEPNKSISELVKEMT 264 (332)
Q Consensus 194 ~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~-~~----~~~~lga~~-v~--~~~~~~~~~~~~~~~~~~ 264 (332)
.-+++++||+|+ |.+|..++..+...|+ +|++++++.++ .+ .++..|.+. ++ |..+ .+++.+.+.+..
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~i~ 119 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD--EAFCKDAVEETV 119 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHH
Confidence 345789999998 9999999998888998 89888876532 22 223334332 22 2222 233323232221
Q ss_pred C-CCCccEEEEcCCCh--------------------------HHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 265 H-GTGVDYGFECTGVA--------------------------SLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 265 ~-~~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
. -.++|++|.++|.. ..++.++..+++. |+++.+++...
T Consensus 120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~-g~iV~isS~~~ 185 (290)
T PRK06701 120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG-SAIINTGSITG 185 (290)
T ss_pred HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC-CeEEEEecccc
Confidence 1 12589999988741 0122334455666 89999887543
No 273
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.079 Score=48.06 Aligned_cols=103 Identities=19% Similarity=0.242 Sum_probs=62.3
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-H---HcCCCe-ee--CCCCCCCchHHHHHHHhcCCCCc
Q 043260 197 GSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-E---AFGMTD-FI--NPDDEPNKSISELVKEMTHGTGV 269 (332)
Q Consensus 197 g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~---~lga~~-v~--~~~~~~~~~~~~~~~~~~~~~g~ 269 (332)
+++++|.|+|++|..++..+. .|. +|+++++++++++.+ + +.|.+. ++ |..+ .+++.+.+.+...-.++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV 77 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence 457888899999999888885 788 999999987765432 2 234321 22 3332 23444444332111268
Q ss_pred cEEEEcCCChH------------------HHHHHHHHhccCCcEEEEEcCCCC
Q 043260 270 DYGFECTGVAS------------------LISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 270 d~vid~~g~~~------------------~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
|++|+++|... .++.++..+.++ |+++.+++...
T Consensus 78 d~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS~~~ 129 (275)
T PRK06940 78 TGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIASQSG 129 (275)
T ss_pred CEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEeccc
Confidence 99999998421 123344455566 77777765543
No 274
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.17 E-value=0.02 Score=49.44 Aligned_cols=98 Identities=21% Similarity=0.286 Sum_probs=61.6
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHc----CCCeeeCCCCCCCchHHHHHHHhcC
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAF----GMTDFINPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~~~~~~~ 265 (332)
+.....++.+||-+|+|. |..+..+++. |. +|+++|.+++-.+.+++. +...+ .... .++ .+..-
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~----~~~~~ 92 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDL----NNLTF 92 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cCh----hhCCc
Confidence 334456778999999977 7777777764 77 999999998876655442 32211 1110 111 11111
Q ss_pred CCCccEEEEcCCC--------hHHHHHHHHHhccCCcEEEEE
Q 043260 266 GTGVDYGFECTGV--------ASLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 266 ~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~ 299 (332)
...||+|+.+..- ...+..+.+.|+++ |.++++
T Consensus 93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~ 133 (197)
T PRK11207 93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIV 133 (197)
T ss_pred CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence 2369999986441 24567888899998 986543
No 275
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.16 E-value=0.088 Score=48.81 Aligned_cols=96 Identities=17% Similarity=0.178 Sum_probs=61.6
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeee-CCCCCCCchHHHHHHHhcCCCCccEEEEcC
Q 043260 199 SVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFI-NPDDEPNKSISELVKEMTHGTGVDYGFECT 276 (332)
Q Consensus 199 ~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~~~~~~~~~g~d~vid~~ 276 (332)
+|+|+|+ |-+|..+++.+...|. +|++++++.++.......+.+.+. |..+ ++++ .+... ++|+||+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d--~~~l----~~al~--g~d~Vi~~~ 72 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL--PETL----PPSFK--GVTAIIDAS 72 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC--HHHH----HHHHC--CCCEEEECC
Confidence 6999998 9999999999988998 899999887665554555654332 2222 1222 22222 589999987
Q ss_pred CChH------------HHHHHHHHhccCC-cEEEEEcCCC
Q 043260 277 GVAS------------LISEALEATKLGK-GKVMAIGAAN 303 (332)
Q Consensus 277 g~~~------------~~~~~~~~l~~~~-G~~v~~G~~~ 303 (332)
+... ....+++.++..+ .+++.++..+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~ 112 (317)
T CHL00194 73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILN 112 (317)
T ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccc
Confidence 6320 1134455555541 3788887743
No 276
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.15 E-value=0.028 Score=55.27 Aligned_cols=77 Identities=26% Similarity=0.406 Sum_probs=55.6
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc---------------------chHHHHHHcCCCeeeCCCCCCCc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP---------------------CRKDKGEAFGMTDFINPDDEPNK 254 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~---------------------~~~~~~~~lga~~v~~~~~~~~~ 254 (332)
++++|+|+|+|+.|+.++..++..|. +|++++..+ ...+.++++|.+..++.... .
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~--~ 216 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG--R 216 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC--C
Confidence 67899999999999999999999999 898888654 23467788898766554320 1
Q ss_pred hHHHHHHHhcCCCCccEEEEcCCCh
Q 043260 255 SISELVKEMTHGTGVDYGFECTGVA 279 (332)
Q Consensus 255 ~~~~~~~~~~~~~g~d~vid~~g~~ 279 (332)
++ .+.++. .++|.||.++|..
T Consensus 217 ~~--~~~~~~--~~~D~vilAtGa~ 237 (467)
T TIGR01318 217 DI--SLDDLL--EDYDAVFLGVGTY 237 (467)
T ss_pred cc--CHHHHH--hcCCEEEEEeCCC
Confidence 11 112222 2699999999975
No 277
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.15 E-value=0.13 Score=44.75 Aligned_cols=92 Identities=17% Similarity=0.135 Sum_probs=60.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcc-hHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEE
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPC-RKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFE 274 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid 274 (332)
.|.+|||+|+|.+|..-++.+...|+ +|++++.... .++.+.+.|--..+. .+ .. .+. + .++|+||-
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~---~~-~~d---l---~~~~lVi~ 75 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RC---FD-ADI---L---EGAFLVIA 75 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CC---CC-HHH---h---CCcEEEEE
Confidence 46799999999999999999999998 8999876543 223333334212221 11 11 111 1 26999999
Q ss_pred cCCChHHHHHHHHHhccCCcEEEEEc
Q 043260 275 CTGVASLISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 275 ~~g~~~~~~~~~~~l~~~~G~~v~~G 300 (332)
+++.+..-.......+.. |..+..-
T Consensus 76 at~d~~ln~~i~~~a~~~-~ilvn~~ 100 (205)
T TIGR01470 76 ATDDEELNRRVAHAARAR-GVPVNVV 100 (205)
T ss_pred CCCCHHHHHHHHHHHHHc-CCEEEEC
Confidence 999964545666666665 7666544
No 278
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.047 Score=49.40 Aligned_cols=79 Identities=11% Similarity=0.126 Sum_probs=51.1
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH-cCCC-eee--CCCCCCCchHHHHHHHhcC-CCCcc
Q 043260 197 GSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA-FGMT-DFI--NPDDEPNKSISELVKEMTH-GTGVD 270 (332)
Q Consensus 197 g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~-~v~--~~~~~~~~~~~~~~~~~~~-~~g~d 270 (332)
++++||+|+ |.+|..+++.+...|. +|++++++.++++.+.+ ++.. ..+ |..+ .+++.+.+..... -.++|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~d 79 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD--RAAVFAAVETAVEHFGRLD 79 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 468999998 9999999998888898 89999998877665433 3322 122 2222 2333333332211 12589
Q ss_pred EEEEcCCC
Q 043260 271 YGFECTGV 278 (332)
Q Consensus 271 ~vid~~g~ 278 (332)
.+|.+.|.
T Consensus 80 ~vi~~ag~ 87 (275)
T PRK08263 80 IVVNNAGY 87 (275)
T ss_pred EEEECCCC
Confidence 99999884
No 279
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.14 E-value=0.041 Score=49.33 Aligned_cols=36 Identities=25% Similarity=0.393 Sum_probs=31.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP 231 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~ 231 (332)
...+|+|+|+|++|..++..+...|..+++++|.+.
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 447899999999999999999999999999998654
No 280
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.035 Score=49.66 Aligned_cols=79 Identities=11% Similarity=0.098 Sum_probs=51.3
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-HcCC--C-eee--CCCCCCCchHHHHHHHhcCC-CC
Q 043260 197 GSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-AFGM--T-DFI--NPDDEPNKSISELVKEMTHG-TG 268 (332)
Q Consensus 197 g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga--~-~v~--~~~~~~~~~~~~~~~~~~~~-~g 268 (332)
++++||+|+ |++|..++..+...|+ +|++++++.++.+... ++.. + ..+ |..+ .+++.+.+.+.... ..
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence 468999998 9999999999988999 9999999887765443 2321 1 122 3322 23343333332211 14
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
+|++|+++|.
T Consensus 79 id~lv~~ag~ 88 (257)
T PRK07024 79 PDVVIANAGI 88 (257)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 281
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.12 E-value=0.046 Score=48.12 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=51.4
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchH-HHHHHcCCCee-eCCCCCCCchHHHHHHHhcCC-CCccEE
Q 043260 197 GSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRK-DKGEAFGMTDF-INPDDEPNKSISELVKEMTHG-TGVDYG 272 (332)
Q Consensus 197 g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~-~~~~~lga~~v-~~~~~~~~~~~~~~~~~~~~~-~g~d~v 272 (332)
++++||+|+ |++|..+++.+...|+ +|+++++++++. +.+++.|...+ .|..+ .++..+.+.+.... .++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence 468999998 9999999999988999 999998876543 33444554321 22222 23444333333221 158999
Q ss_pred EEcCCC
Q 043260 273 FECTGV 278 (332)
Q Consensus 273 id~~g~ 278 (332)
+++.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 999874
No 282
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.11 E-value=0.073 Score=45.72 Aligned_cols=99 Identities=21% Similarity=0.256 Sum_probs=58.8
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-Hc----CCCee-eCCCCCCCchHHHHHHHhcCCC
Q 043260 195 EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-AF----GMTDF-INPDDEPNKSISELVKEMTHGT 267 (332)
Q Consensus 195 ~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~l----ga~~v-~~~~~~~~~~~~~~~~~~~~~~ 267 (332)
-++.+++|+|+ |.+|..++..+...|. +|+++.++.++.+.+. ++ +.... .+..+ .++ +.+.. .
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~----~~~~~--~ 96 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAA----RAAAI--K 96 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHH----HHHHH--h
Confidence 35789999997 9999998888888897 9999999887765432 23 22211 11111 122 22222 2
Q ss_pred CccEEEEcCCChHHHHHHHH-HhccCCcEEEEEcCCC
Q 043260 268 GVDYGFECTGVASLISEALE-ATKLGKGKVMAIGAAN 303 (332)
Q Consensus 268 g~d~vid~~g~~~~~~~~~~-~l~~~~G~~v~~G~~~ 303 (332)
++|+||.+++.+........ ..+++ -.++.+..+.
T Consensus 97 ~~diVi~at~~g~~~~~~~~~~~~~~-~vv~D~~~~~ 132 (194)
T cd01078 97 GADVVFAAGAAGVELLEKLAWAPKPL-AVAADVNAVP 132 (194)
T ss_pred cCCEEEECCCCCceechhhhcccCce-eEEEEccCCC
Confidence 58999999887532111222 22232 3566665554
No 283
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.10 E-value=0.037 Score=49.46 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=31.4
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 043260 197 GSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP 231 (332)
Q Consensus 197 g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~ 231 (332)
..+|+|+|+|++|..+++.+..+|.++++++|.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 47899999999999999999999999999988654
No 284
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.10 E-value=0.023 Score=51.74 Aligned_cols=130 Identities=21% Similarity=0.285 Sum_probs=86.6
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCC--------CCchHHHHHHHhc
Q 043260 193 KVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDE--------PNKSISELVKEMT 264 (332)
Q Consensus 193 ~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~--------~~~~~~~~~~~~~ 264 (332)
..-++.++++.|.|..|++++..++..|+ -|...+...++.+..+++|+...-..+.+ .++++.+.-.++.
T Consensus 160 gtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~ 238 (356)
T COG3288 160 GTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELV 238 (356)
T ss_pred ccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHH
Confidence 34566788999999999999999999999 77777778888888888887544322221 2334433222221
Q ss_pred --CCCCccEEEEcCCCh-----HH-HHHHHHHhccCCcEEEEEcCCCCCcccCChHh-H-hc-CcEEEEee
Q 043260 265 --HGTGVDYGFECTGVA-----SL-ISEALEATKLGKGKVMAIGAANEAKVPLNFPA-I-AL-GRNLKGTI 324 (332)
Q Consensus 265 --~~~g~d~vid~~g~~-----~~-~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~-~~-~~~i~g~~ 324 (332)
.-+++|+||-+.--+ .. .....+.++|+ +.+|.+....+.+.+..-.. + .. +++|+|-.
T Consensus 239 a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 239 AEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 124699999875432 22 36888999998 99999976655333333222 2 22 77888864
No 285
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.10 E-value=0.02 Score=52.28 Aligned_cols=95 Identities=19% Similarity=0.173 Sum_probs=61.0
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEE
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGF 273 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vi 273 (332)
..+++++|+|+|++|.+++..+...|+.+|++++++.++.+.+ ++++....+.. . .+ ..+. -..+|+||
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~----~~~~--~~~~DivI 190 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LE----LQEE--LADFDLII 190 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---cc----chhc--cccCCEEE
Confidence 4567899999999999999999999966999999998887644 34432110111 0 00 1111 12589999
Q ss_pred EcCCChHH-----HHHHHHHhccCCcEEEEEc
Q 043260 274 ECTGVASL-----ISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 274 d~~g~~~~-----~~~~~~~l~~~~G~~v~~G 300 (332)
++++..-. .....+.+.+. ..++.+-
T Consensus 191 naTp~g~~~~~~~~~~~~~~l~~~-~~v~Div 221 (278)
T PRK00258 191 NATSAGMSGELPLPPLPLSLLRPG-TIVYDMI 221 (278)
T ss_pred ECCcCCCCCCCCCCCCCHHHcCCC-CEEEEee
Confidence 99876310 01234566766 6666663
No 286
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.09 E-value=0.034 Score=56.96 Aligned_cols=77 Identities=26% Similarity=0.377 Sum_probs=56.9
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcc---------------------hHHHHHHcCCCeeeCCCCCCCc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPC---------------------RKDKGEAFGMTDFINPDDEPNK 254 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~---------------------~~~~~~~lga~~v~~~~~~~~~ 254 (332)
.+++|+|+|+|+.|+.++..++..|. +|+++++.+. +.++++++|.+..++.......
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 8999987763 4567788898766655321111
Q ss_pred hHHHHHHHhcCCCCccEEEEcCCCh
Q 043260 255 SISELVKEMTHGTGVDYGFECTGVA 279 (332)
Q Consensus 255 ~~~~~~~~~~~~~g~d~vid~~g~~ 279 (332)
++ .++. .++|.||.++|..
T Consensus 388 ~~----~~l~--~~~DaV~latGa~ 406 (639)
T PRK12809 388 TF----SDLT--SEYDAVFIGVGTY 406 (639)
T ss_pred CH----HHHH--hcCCEEEEeCCCC
Confidence 22 2222 2699999999974
No 287
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.09 E-value=0.036 Score=53.05 Aligned_cols=91 Identities=19% Similarity=0.273 Sum_probs=57.9
Q ss_pred EEEECCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHH--cCCC---eeeCCCCCCCchHHHHHHHhcCCCCccEEE
Q 043260 200 VAVFGLGAVGLGVMDRARIQGA-AKIIGIDKNPCRKDKGEA--FGMT---DFINPDDEPNKSISELVKEMTHGTGVDYGF 273 (332)
Q Consensus 200 vlV~G~g~vG~~~~~la~~~G~-~~Vi~~~~~~~~~~~~~~--lga~---~v~~~~~~~~~~~~~~~~~~~~~~g~d~vi 273 (332)
|+|+|+|.+|..+++.+...+- .+|++.+++.++.+.+.+ .+.. ..+|.. +.. .+.++.. +.|+||
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~-----~~~-~l~~~~~--~~dvVi 72 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVN-----DPE-SLAELLR--GCDVVI 72 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TT-----THH-HHHHHHT--TSSEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecC-----CHH-HHHHHHh--cCCEEE
Confidence 6899999999999999988764 389999999999776543 2221 123332 222 2555544 369999
Q ss_pred EcCCChHHHHHHHHHhccCCcEEEEE
Q 043260 274 ECTGVASLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 274 d~~g~~~~~~~~~~~l~~~~G~~v~~ 299 (332)
+|++......-+-.|+..+ -.++..
T Consensus 73 n~~gp~~~~~v~~~~i~~g-~~yvD~ 97 (386)
T PF03435_consen 73 NCAGPFFGEPVARACIEAG-VHYVDT 97 (386)
T ss_dssp E-SSGGGHHHHHHHHHHHT--EEEES
T ss_pred ECCccchhHHHHHHHHHhC-CCeecc
Confidence 9999754555566666666 777773
No 288
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.09 E-value=0.071 Score=47.36 Aligned_cols=80 Identities=24% Similarity=0.247 Sum_probs=51.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-H---HcCCC-eee--CCCCCCCchHHHHHHHhcC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-E---AFGMT-DFI--NPDDEPNKSISELVKEMTH-G 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~---~lga~-~v~--~~~~~~~~~~~~~~~~~~~-~ 266 (332)
+++++||+|+ |.+|..+++.+...|. +|++++++.++.+.. . +.+.. ..+ |..+ .+++.+.+..... .
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD--EEAINAGIDYAVETF 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4578999998 9999999998888998 899999988765533 2 22332 122 3322 2333333332211 1
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
.++|+||.+++.
T Consensus 80 ~~~d~vi~~a~~ 91 (258)
T PRK12429 80 GGVDILVNNAGI 91 (258)
T ss_pred CCCCEEEECCCC
Confidence 258999998873
No 289
>PRK00811 spermidine synthase; Provisional
Probab=96.09 E-value=0.04 Score=50.47 Aligned_cols=96 Identities=15% Similarity=0.111 Sum_probs=65.0
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHc-C-----C--C---eeeCCCCCCCchHHHHHHHh
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAF-G-----M--T---DFINPDDEPNKSISELVKEM 263 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~l-g-----a--~---~v~~~~~~~~~~~~~~~~~~ 263 (332)
.+.++||++|+|. |..+..+++..+..+|++++.+++-.+.+++. . . + .++. .+..+.+..
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~- 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE- 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence 4567899999876 66677777766767999999999988887763 1 1 1 1221 223334443
Q ss_pred cCCCCccEEEEcCCC----------hHHHHHHHHHhccCCcEEEEEc
Q 043260 264 THGTGVDYGFECTGV----------ASLISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 264 ~~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~~v~~G 300 (332)
. ...+|+||-.... .+.+..+.+.|+++ |.++.-.
T Consensus 147 ~-~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 147 T-ENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred C-CCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 2 3379999975432 23467888999998 9988753
No 290
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.031 Score=50.17 Aligned_cols=80 Identities=19% Similarity=0.230 Sum_probs=52.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-H----cCCCee----eCCCCCCCchHHHHHHHhcC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-A----FGMTDF----INPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~----lga~~v----~~~~~~~~~~~~~~~~~~~~ 265 (332)
.|++++|+|+ +++|...++.+...|+ +|+++++++++.+.+. + .+...+ .|..+ .++..+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 4788999998 9999999999999999 8999999887765332 1 111121 23333 2333333333211
Q ss_pred -CCCccEEEEcCCC
Q 043260 266 -GTGVDYGFECTGV 278 (332)
Q Consensus 266 -~~g~d~vid~~g~ 278 (332)
-..+|++|+++|.
T Consensus 84 ~~g~id~li~~Ag~ 97 (265)
T PRK07062 84 RFGGVDMLVNNAGQ 97 (265)
T ss_pred hcCCCCEEEECCCC
Confidence 1258999999984
No 291
>PRK05717 oxidoreductase; Validated
Probab=96.08 E-value=0.035 Score=49.55 Aligned_cols=80 Identities=21% Similarity=0.295 Sum_probs=51.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHH-HHHcCCCe-e--eCCCCCCCchHHHHHHHhcCC-CCc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDK-GEAFGMTD-F--INPDDEPNKSISELVKEMTHG-TGV 269 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~-~~~lga~~-v--~~~~~~~~~~~~~~~~~~~~~-~g~ 269 (332)
.|++++|+|+ |.+|..++..+...|+ +|++++++.++.+. .++++... . .|..+ .++..+.+.+.... ..+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 4788999998 9999999999988998 89999887665543 34455321 1 23322 23333333332211 158
Q ss_pred cEEEEcCCC
Q 043260 270 DYGFECTGV 278 (332)
Q Consensus 270 d~vid~~g~ 278 (332)
|++|.+.|.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999998874
No 292
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.07 E-value=0.023 Score=49.26 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=31.5
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCC
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKN 230 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~ 230 (332)
...+|+|+|+|++|..+++.+...|..+++++|.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34679999999999999999999999889999987
No 293
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.04 E-value=0.057 Score=48.02 Aligned_cols=106 Identities=22% Similarity=0.213 Sum_probs=77.6
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHH----cCCCeeeCCCCCCCchHHHHHHHhc
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGA-AKIIGIDKNPCRKDKGEA----FGMTDFINPDDEPNKSISELVKEMT 264 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~~~~~~ 264 (332)
...++.+|++|+=.|.|. |.+++-|++..|. .+|+..+..++..+.|++ +|....+.... . .+.+..
T Consensus 88 ~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~----Dv~~~~ 159 (256)
T COG2519 88 ARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---G----DVREGI 159 (256)
T ss_pred HHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---c----cccccc
Confidence 467899999999888876 8888899988874 799999999988876643 45443222221 2 233333
Q ss_pred CCCCccEEEEcCCCh-HHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 265 HGTGVDYGFECTGVA-SLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 265 ~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
.+..+|.||--...+ ..++.+.+.|+++ |.++++-..-+
T Consensus 160 ~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P~ve 199 (256)
T COG2519 160 DEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSPTVE 199 (256)
T ss_pred cccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcCCHH
Confidence 344799888766665 5788999999998 99999986554
No 294
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.037 Score=49.29 Aligned_cols=80 Identities=20% Similarity=0.258 Sum_probs=52.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe-ee--CCCCCCCchHHHHHHHhcCC-
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD-FI--NPDDEPNKSISELVKEMTHG- 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v~--~~~~~~~~~~~~~~~~~~~~- 266 (332)
++++++|+|+ |++|..++..+...|+ +|+++++++++.+.+ ++.+.+. .+ |..+ .++..+.+.+....
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD--EAYAKALVALAVERF 81 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 4678999998 9999999999999999 899999988776533 2234332 22 2222 23333333322111
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
..+|++|.++|.
T Consensus 82 ~~id~li~~ag~ 93 (254)
T PRK07478 82 GGLDIAFNNAGT 93 (254)
T ss_pred CCCCEEEECCCC
Confidence 258999999874
No 295
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.04 E-value=0.028 Score=50.26 Aligned_cols=105 Identities=15% Similarity=0.183 Sum_probs=64.6
Q ss_pred CCCEEEEECCC---hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCC--eee--CCCCCCCchHHHHHHHhcCC-C
Q 043260 196 KGSSVAVFGLG---AVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMT--DFI--NPDDEPNKSISELVKEMTHG-T 267 (332)
Q Consensus 196 ~g~~vlV~G~g---~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~--~v~--~~~~~~~~~~~~~~~~~~~~-~ 267 (332)
.|++++|+|++ ++|.++++.+...|+ +|++++++++..+.++++... ..+ |..+ .++..+.+.+.... .
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g 82 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS--DESIERAFATIKERVG 82 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC--HHHHHHHHHHHHHHhC
Confidence 57889999874 899999999999999 899988875434444444222 122 2222 23343333332211 1
Q ss_pred CccEEEEcCCChH-----------------------------HHHHHHHHhccCCcEEEEEcCCCC
Q 043260 268 GVDYGFECTGVAS-----------------------------LISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 268 g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
.+|++|+++|... ..+.++..+.++ |+++.+++...
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~-g~Iv~iss~~~ 147 (252)
T PRK06079 83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPG-ASIVTLTYFGS 147 (252)
T ss_pred CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccC-ceEEEEeccCc
Confidence 5899999887310 123344556666 88888876554
No 296
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.034 Score=49.47 Aligned_cols=73 Identities=15% Similarity=0.123 Sum_probs=49.2
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----HcCCC-ee--eCCCCCCCchHHHHHHHhcCCCC
Q 043260 197 GSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE----AFGMT-DF--INPDDEPNKSISELVKEMTHGTG 268 (332)
Q Consensus 197 g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~~~~~~~~~g 268 (332)
++++||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+. ..+.. .+ .|..+ . +.+.+...+ +
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~---~~~~~~~~~-~ 73 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD---A---IDRAQAAEW-D 73 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC---H---HHHHHHhcC-C
Confidence 468999998 9999999999999998 8999988876654432 23332 12 23322 1 123332222 7
Q ss_pred ccEEEEcCC
Q 043260 269 VDYGFECTG 277 (332)
Q Consensus 269 ~d~vid~~g 277 (332)
+|+||++.|
T Consensus 74 id~vi~~ag 82 (257)
T PRK09291 74 VDVLLNNAG 82 (257)
T ss_pred CCEEEECCC
Confidence 999999987
No 297
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.02 E-value=0.1 Score=46.39 Aligned_cols=78 Identities=19% Similarity=0.253 Sum_probs=51.4
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH-cCCCe-e--eCCCCCCCchHHHHHHHhcC-CCCccE
Q 043260 198 SSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA-FGMTD-F--INPDDEPNKSISELVKEMTH-GTGVDY 271 (332)
Q Consensus 198 ~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~-v--~~~~~~~~~~~~~~~~~~~~-~~g~d~ 271 (332)
++++|+|+ |++|...+..+...|+ +|+++++++++.+.+.+ ++.+. . .|..+ .+++.+.+.+... ..+.|.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 36899998 9999999999999999 89999998877665433 44332 1 23322 2333333333211 125899
Q ss_pred EEEcCCC
Q 043260 272 GFECTGV 278 (332)
Q Consensus 272 vid~~g~ 278 (332)
+|.++|.
T Consensus 78 vi~~ag~ 84 (248)
T PRK10538 78 LVNNAGL 84 (248)
T ss_pred EEECCCc
Confidence 9998874
No 298
>PLN02366 spermidine synthase
Probab=96.02 E-value=0.057 Score=50.07 Aligned_cols=100 Identities=18% Similarity=0.093 Sum_probs=65.1
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHc-CC------CeeeCCCCCCCchHHHHHHHhcCCC
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAF-GM------TDFINPDDEPNKSISELVKEMTHGT 267 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga------~~v~~~~~~~~~~~~~~~~~~~~~~ 267 (332)
.+.++||++|+|. |..+..+++.-+..+|.+++.+++-.+.+++. .. +.-+... ..+..+.+++.. +.
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi---~~Da~~~l~~~~-~~ 164 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLH---IGDGVEFLKNAP-EG 164 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEE---EChHHHHHhhcc-CC
Confidence 5578999999876 55666777776666899999998877777663 11 1001111 123333444332 33
Q ss_pred CccEEEEcCCC----------hHHHHHHHHHhccCCcEEEEEc
Q 043260 268 GVDYGFECTGV----------ASLISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 268 g~d~vid~~g~----------~~~~~~~~~~l~~~~G~~v~~G 300 (332)
.+|+||--... .+.+..+.+.|+++ |.++.-.
T Consensus 165 ~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 165 TYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred CCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 69999975443 23578899999998 9987543
No 299
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=96.01 E-value=0.1 Score=46.82 Aligned_cols=96 Identities=18% Similarity=0.166 Sum_probs=68.2
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHc-CCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCC
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQ-GAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTG 268 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~-G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g 268 (332)
......++++||=+|+|. |..+..+++.. +. +|+++|.++.-.+.+++.+.+.+. . +. .++.....
T Consensus 23 ~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-~------d~----~~~~~~~~ 89 (255)
T PRK14103 23 ARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-G------DV----RDWKPKPD 89 (255)
T ss_pred HhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-c------Ch----hhCCCCCC
Confidence 455667889999999976 77777888775 45 899999999888888776544322 1 11 12222337
Q ss_pred ccEEEEcCC-----C-hHHHHHHHHHhccCCcEEEEE
Q 043260 269 VDYGFECTG-----V-ASLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 269 ~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 299 (332)
||+|+.... . ...+..+.+.|+|+ |.+++.
T Consensus 90 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 90 TDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred ceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 999998553 2 24577889999998 998875
No 300
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.01 E-value=0.073 Score=47.11 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=31.2
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 043260 197 GSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP 231 (332)
Q Consensus 197 g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~ 231 (332)
..+|+|+|+|++|..++..+..+|..+++++|.+.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ 55 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDV 55 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 57899999999999999999999999999997543
No 301
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.00 E-value=0.014 Score=44.90 Aligned_cols=89 Identities=24% Similarity=0.268 Sum_probs=58.5
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFEC 275 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~ 275 (332)
.|.+|||+|+|.+|..-++.+...|+ +|+++.... +..+ +.-... . ..+ .+. -.++|+||-+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~-----~~~----~~~--l~~~~lV~~a 67 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-R-----REF----EED--LDGADLVFAA 67 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-E-----SS-----GGG--CTTESEEEE-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-h-----hhH----HHH--HhhheEEEec
Confidence 57899999999999999999999998 999998775 2222 211111 1 222 111 2369999999
Q ss_pred CCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 276 TGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 276 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
++++..-....+..+.. +.++.+....
T Consensus 68 t~d~~~n~~i~~~a~~~-~i~vn~~D~p 94 (103)
T PF13241_consen 68 TDDPELNEAIYADARAR-GILVNVVDDP 94 (103)
T ss_dssp SS-HHHHHHHHHHHHHT-TSEEEETT-C
T ss_pred CCCHHHHHHHHHHHhhC-CEEEEECCCc
Confidence 99975555666666666 8888776544
No 302
>PRK06153 hypothetical protein; Provisional
Probab=96.00 E-value=0.026 Score=53.48 Aligned_cols=35 Identities=26% Similarity=0.427 Sum_probs=31.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCC
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKN 230 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~ 230 (332)
.+.+|+|+|+|++|-.++..+.+.|.++++++|.+
T Consensus 175 ~~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D 209 (393)
T PRK06153 175 EGQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGD 209 (393)
T ss_pred hhCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999999999999865
No 303
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.99 E-value=0.046 Score=48.96 Aligned_cols=79 Identities=22% Similarity=0.256 Sum_probs=50.1
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HH---cCCCeeeCCCCCCCchHHHHHHHhcC-CCCccEE
Q 043260 199 SVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EA---FGMTDFINPDDEPNKSISELVKEMTH-GTGVDYG 272 (332)
Q Consensus 199 ~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~---lga~~v~~~~~~~~~~~~~~~~~~~~-~~g~d~v 272 (332)
++||+|+ +++|.++++.+...|+ +|+++++++++.+.+ .+ .+....+..+-.+.++..+.+.+... -.++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899998 9999999999999999 899999988765433 22 23222222221112333333333211 1258999
Q ss_pred EEcCCC
Q 043260 273 FECTGV 278 (332)
Q Consensus 273 id~~g~ 278 (332)
|++.|.
T Consensus 81 i~naG~ 86 (259)
T PRK08340 81 VWNAGN 86 (259)
T ss_pred EECCCC
Confidence 999874
No 304
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.98 E-value=0.032 Score=45.02 Aligned_cols=99 Identities=17% Similarity=0.206 Sum_probs=59.1
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcc-------------------hHH----HHHHcCC-CeeeCCCCCC
Q 043260 197 GSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPC-------------------RKD----KGEAFGM-TDFINPDDEP 252 (332)
Q Consensus 197 g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~-------------------~~~----~~~~lga-~~v~~~~~~~ 252 (332)
..+|+|+|+|++|..++..+...|.++++++|.+.- |.+ .++++.. -++....
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~--- 78 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIP--- 78 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEE---
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeee---
Confidence 468999999999999999999999999999986432 111 1222221 1222111
Q ss_pred CchH-HHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcC
Q 043260 253 NKSI-SELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 253 ~~~~-~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
..+ .+...++. .++|+||+|+.+......+.+.+...+-.++..+.
T Consensus 79 -~~~~~~~~~~~~--~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~~~ 125 (135)
T PF00899_consen 79 -EKIDEENIEELL--KDYDIVIDCVDSLAARLLLNEICREYGIPFIDAGV 125 (135)
T ss_dssp -SHCSHHHHHHHH--HTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEEEE
T ss_pred -cccccccccccc--cCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 111 12223333 26899999999865555666666665134444443
No 305
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.97 E-value=0.061 Score=51.37 Aligned_cols=35 Identities=17% Similarity=0.218 Sum_probs=32.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCC
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKN 230 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~ 230 (332)
...+|+|+|+|++|..++..+...|.++++++|.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999999999987
No 306
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.96 E-value=0.034 Score=47.12 Aligned_cols=33 Identities=18% Similarity=0.269 Sum_probs=29.9
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 043260 199 SVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP 231 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~ 231 (332)
+|+|+|+|++|...++.+...|..+++++|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999999998899999765
No 307
>PRK07985 oxidoreductase; Provisional
Probab=95.96 E-value=0.1 Score=47.96 Aligned_cols=105 Identities=19% Similarity=0.156 Sum_probs=63.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCc--chHHHH----HHcCCCe-ee--CCCCCCCchHHHHHHHhcC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNP--CRKDKG----EAFGMTD-FI--NPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~--~~~~~~----~~lga~~-v~--~~~~~~~~~~~~~~~~~~~ 265 (332)
+++++||+|+ |++|.++++.+...|+ +|+++.++. ++.+.+ ++.|... .+ |..+ .++..+.+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 124 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAHK 124 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence 5678999998 9999999999999999 888876543 222222 2334322 22 3322 2333333333221
Q ss_pred -CCCccEEEEcCCCh--------------------------HHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 266 -GTGVDYGFECTGVA--------------------------SLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 266 -~~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
-.+.|+++.+.|.. ..++.++..+.++ |+++.+++...
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~~~ 189 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSIQA 189 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCchh
Confidence 12589999987731 1123444455666 89999887544
No 308
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.96 E-value=0.045 Score=48.10 Aligned_cols=80 Identities=20% Similarity=0.290 Sum_probs=52.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHH----HHHcCCCee---eCCCCCCCchHHHHHHHhcCC-
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDK----GEAFGMTDF---INPDDEPNKSISELVKEMTHG- 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~----~~~lga~~v---~~~~~~~~~~~~~~~~~~~~~- 266 (332)
+++++||+|+ |.+|..+++.+...|. +|+++++++++.+. +++.+.... .|..+ ..++.+.+.+....
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAF 80 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 3578999998 9999999999988999 79999998876543 233444322 23332 23343333332111
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
..+|.||.++|.
T Consensus 81 ~~id~vi~~ag~ 92 (246)
T PRK05653 81 GALDILVNNAGI 92 (246)
T ss_pred CCCCEEEECCCc
Confidence 258999998864
No 309
>PRK06194 hypothetical protein; Provisional
Probab=95.94 E-value=0.028 Score=51.07 Aligned_cols=82 Identities=18% Similarity=0.221 Sum_probs=51.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHc---CCCe-eeCCCCCCCchHHHHHHHhcC-CCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAF---GMTD-FINPDDEPNKSISELVKEMTH-GTG 268 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~l---ga~~-v~~~~~~~~~~~~~~~~~~~~-~~g 268 (332)
+++++||+|+ |++|..+++.+...|+ +|++++++.++++.. .++ +... ++..+-.+.+++.+.+..... -.+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3678999998 9999999999988999 899999887665433 222 3321 122211112333333322111 125
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
+|+||+++|.
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 8999999885
No 310
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.11 Score=46.17 Aligned_cols=105 Identities=20% Similarity=0.271 Sum_probs=62.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEc-CCcchHH-HH---HHcCCCee-e--CCCCCCCchHHH---HHHHh
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGID-KNPCRKD-KG---EAFGMTDF-I--NPDDEPNKSISE---LVKEM 263 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~-~~~~~~~-~~---~~lga~~v-~--~~~~~~~~~~~~---~~~~~ 263 (332)
.++++||+|+ |++|.++++.+...|+ +|++.. ++.++.+ .. ++.+.+.. + |..+ .++... .+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 79 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES--LHGVEALYSSLDNE 79 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCC--HHHHHHHHHHHHHH
Confidence 4688999998 9999999999999998 787764 4444433 22 22233211 1 2221 122222 22221
Q ss_pred ----cCCCCccEEEEcCCCh----------H---------------HHHHHHHHhccCCcEEEEEcCCCC
Q 043260 264 ----THGTGVDYGFECTGVA----------S---------------LISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 264 ----~~~~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
.+..++|++++++|.. + .++.++..+.+. |+++.+++...
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~~ 148 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAAT 148 (252)
T ss_pred hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCccc
Confidence 1213689999998731 0 122355566676 89999987654
No 311
>PRK08223 hypothetical protein; Validated
Probab=95.93 E-value=0.042 Score=50.21 Aligned_cols=36 Identities=31% Similarity=0.258 Sum_probs=32.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP 231 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~ 231 (332)
...+|+|+|+|++|..+++.+..+|.+++.++|.+.
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 456799999999999999999999999999998654
No 312
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.93 E-value=0.033 Score=50.66 Aligned_cols=82 Identities=20% Similarity=0.226 Sum_probs=53.8
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----HcCCC------eeeCCCCC-CCchHHHHHHH
Q 043260 195 EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE----AFGMT------DFINPDDE-PNKSISELVKE 262 (332)
Q Consensus 195 ~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~------~v~~~~~~-~~~~~~~~~~~ 262 (332)
-.|++++|+|+ .++|.+.+..+...|+ +|+++++++++.+..+ ..+.. .+.|..+. ..++..+...+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 46788999988 9999999999999999 9999999998865432 22322 12233320 11222222223
Q ss_pred hcCCCCccEEEEcCCC
Q 043260 263 MTHGTGVDYGFECTGV 278 (332)
Q Consensus 263 ~~~~~g~d~vid~~g~ 278 (332)
...+ ..|+++++.|.
T Consensus 85 ~~~G-kidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFG-KIDILVNNAGA 99 (270)
T ss_pred HhCC-CCCEEEEcCCc
Confidence 3233 68999998885
No 313
>PRK07574 formate dehydrogenase; Provisional
Probab=95.92 E-value=0.076 Score=50.76 Aligned_cols=39 Identities=26% Similarity=0.480 Sum_probs=33.9
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHH
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKD 235 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~ 235 (332)
.|++|.|+|.|.+|..+++.++.+|. +|++.+++....+
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~ 229 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEE 229 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchh
Confidence 56899999999999999999999999 9999998763333
No 314
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=95.91 E-value=0.1 Score=47.70 Aligned_cols=89 Identities=20% Similarity=0.228 Sum_probs=66.6
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcch-HHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCC
Q 043260 199 SVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCR-KDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTG 277 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~-~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g 277 (332)
+|.++|.|.+|.-.++=+...|. .+.+.++++++ .+++++.|+...- +..+.+. ..|+||-++.
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~--------s~~eaa~------~aDvVitmv~ 66 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAA--------SPAEAAA------EADVVITMLP 66 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccC--------CHHHHHH------hCCEEEEecC
Confidence 68889999999999999999999 99999999999 8888888875442 2222221 4789998888
Q ss_pred ChHHHHHHH-------HHhccCCcEEEEEcCCC
Q 043260 278 VASLISEAL-------EATKLGKGKVMAIGAAN 303 (332)
Q Consensus 278 ~~~~~~~~~-------~~l~~~~G~~v~~G~~~ 303 (332)
+.+.+.+.+ +.++++ ..+|.+....
T Consensus 67 ~~~~V~~V~~g~~g~~~~~~~G-~i~IDmSTis 98 (286)
T COG2084 67 DDAAVRAVLFGENGLLEGLKPG-AIVIDMSTIS 98 (286)
T ss_pred CHHHHHHHHhCccchhhcCCCC-CEEEECCCCC
Confidence 876655544 344466 7777777654
No 315
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.91 E-value=0.049 Score=48.70 Aligned_cols=80 Identities=21% Similarity=0.304 Sum_probs=52.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----HcCCC-eee--CCCCCCCchHHHHHHHhcC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE----AFGMT-DFI--NPDDEPNKSISELVKEMTH-G 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~~~~~~~-~ 266 (332)
+++++||+|+ |.+|..+++.+...|+ +|++++++.++++.+. +.+.. ..+ |..+ .+++.+.+.+... -
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d--~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD--EADIERLAEETLERF 87 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 5789999998 9999999999988999 8999999887765432 22322 122 3332 3344333333211 1
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
.++|.||.++|.
T Consensus 88 ~~id~vi~~ag~ 99 (259)
T PRK08213 88 GHVDILVNNAGA 99 (259)
T ss_pred CCCCEEEECCCC
Confidence 258999999874
No 316
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.90 E-value=0.057 Score=50.81 Aligned_cols=36 Identities=22% Similarity=0.375 Sum_probs=32.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP 231 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~ 231 (332)
...+|+|+|+|++|..+++.+...|..++.++|.+.
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 346799999999999999999999999999999863
No 317
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.90 E-value=0.068 Score=48.91 Aligned_cols=78 Identities=22% Similarity=0.198 Sum_probs=57.5
Q ss_pred CCCCCEEEEECCCh-HHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEE
Q 043260 194 VEKGSSVAVFGLGA-VGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYG 272 (332)
Q Consensus 194 ~~~g~~vlV~G~g~-vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~v 272 (332)
--.|++++|+|.|. +|...+.++...|+ +|+++.+.. .++.+.+ +.+|+|
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t----------------------~~L~~~~------~~aDIv 206 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT----------------------QNLPELV------KQADII 206 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc----------------------hhHHHHh------ccCCEE
Confidence 35789999999976 99999999999999 898886521 1121112 268999
Q ss_pred EEcCCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 273 FECTGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 273 id~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
|.++|.+..+. .+.++++ ..++.+|...
T Consensus 207 I~AtG~~~~v~--~~~lk~g-avViDvg~n~ 234 (283)
T PRK14192 207 VGAVGKPELIK--KDWIKQG-AVVVDAGFHP 234 (283)
T ss_pred EEccCCCCcCC--HHHcCCC-CEEEEEEEee
Confidence 99998765433 3568887 8888888554
No 318
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.89 E-value=0.057 Score=48.74 Aligned_cols=81 Identities=20% Similarity=0.247 Sum_probs=49.4
Q ss_pred CCCEEEEECC-C--hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH----cCCCeeeCCCCCCCchHHHHHHHhcCC-C
Q 043260 196 KGSSVAVFGL-G--AVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA----FGMTDFINPDDEPNKSISELVKEMTHG-T 267 (332)
Q Consensus 196 ~g~~vlV~G~-g--~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~~~~~~~~-~ 267 (332)
.|+++||+|+ + ++|.++++.+...|+ +|++++++++..+.+++ .+....+..+-.+.+++.+.+.+.... .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 5788999998 3 799999999988999 89888876421222322 232222222221234444444433221 1
Q ss_pred CccEEEEcCC
Q 043260 268 GVDYGFECTG 277 (332)
Q Consensus 268 g~d~vid~~g 277 (332)
.+|++|+++|
T Consensus 84 ~iD~linnAg 93 (262)
T PRK07984 84 KFDGFVHSIG 93 (262)
T ss_pred CCCEEEECCc
Confidence 5899999997
No 319
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.89 E-value=0.048 Score=49.03 Aligned_cols=82 Identities=15% Similarity=0.240 Sum_probs=49.6
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH----cCCCeeeCCCCCCCchHHHHHHHhcCC-C
Q 043260 196 KGSSVAVFGL---GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA----FGMTDFINPDDEPNKSISELVKEMTHG-T 267 (332)
Q Consensus 196 ~g~~vlV~G~---g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~~~~~~~~-~ 267 (332)
+++++||+|+ +++|.+.++.+...|+ +|+++.++++..+.+++ .|....+..+-.+.++..+.+.+.... .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5788999984 5899999999989999 89887665433333322 343222222211234444444332211 2
Q ss_pred CccEEEEcCCC
Q 043260 268 GVDYGFECTGV 278 (332)
Q Consensus 268 g~d~vid~~g~ 278 (332)
++|++|+++|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 58999999874
No 320
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.052 Score=47.61 Aligned_cols=74 Identities=15% Similarity=0.141 Sum_probs=50.5
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCCCee-eCCCCCCCchHHHHHHHhcCCCCccEEEEc
Q 043260 199 SVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGMTDF-INPDDEPNKSISELVKEMTHGTGVDYGFEC 275 (332)
Q Consensus 199 ~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~~~~~~~~~g~d~vid~ 275 (332)
+++|+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++...+ .|..+ .+++.+.+.+.. + .+|+++++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~-~-~id~lv~~ 76 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLFP-H-HLDTIVNV 76 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHHh-h-cCcEEEEC
Confidence 5899988 9999999999988998 999999988776543 44554322 23332 233433333332 2 58999998
Q ss_pred CC
Q 043260 276 TG 277 (332)
Q Consensus 276 ~g 277 (332)
.|
T Consensus 77 ag 78 (223)
T PRK05884 77 PA 78 (223)
T ss_pred CC
Confidence 65
No 321
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.045 Score=48.95 Aligned_cols=80 Identities=18% Similarity=0.221 Sum_probs=51.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHc-----CCC-eee--CCCCCCCchHHHHHHHhcC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAF-----GMT-DFI--NPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~l-----ga~-~v~--~~~~~~~~~~~~~~~~~~~ 265 (332)
.+++++|+|+ |++|..+++.+...|+ +|+++++++++.+.. +++ +.. .++ |..+ .+++.+.+.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD--AASVAAAVAAAEE 82 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence 4688999998 9999999999999999 899999987766533 222 222 122 3322 2333333332211
Q ss_pred -CCCccEEEEcCCC
Q 043260 266 -GTGVDYGFECTGV 278 (332)
Q Consensus 266 -~~g~d~vid~~g~ 278 (332)
-..+|++|++.|.
T Consensus 83 ~~g~id~li~~ag~ 96 (260)
T PRK07063 83 AFGPLDVLVNNAGI 96 (260)
T ss_pred HhCCCcEEEECCCc
Confidence 1258999999884
No 322
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.87 E-value=0.14 Score=44.50 Aligned_cols=99 Identities=15% Similarity=0.188 Sum_probs=63.6
Q ss_pred HHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH----cCCCe--eeCCCCCCCchHHHHHHH
Q 043260 189 WKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA----FGMTD--FINPDDEPNKSISELVKE 262 (332)
Q Consensus 189 ~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~~~~ 262 (332)
....+++++++||-+|+|. |..+..+++.. . +|+.++.+++..+.+++ .+.+. ++..+. .+ .
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~------~~---~ 138 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDG------WK---G 138 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCc------cc---C
Confidence 3566788999999999865 55555555553 3 89999999877665533 44432 221111 00 1
Q ss_pred hcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEc
Q 043260 263 MTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 263 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G 300 (332)
+.....||+|+.............+.|+++ |++++.-
T Consensus 139 ~~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~ 175 (212)
T PRK00312 139 WPAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPV 175 (212)
T ss_pred CCcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence 111236999998766555667888999998 9877543
No 323
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.052 Score=48.35 Aligned_cols=80 Identities=23% Similarity=0.184 Sum_probs=51.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-H---cCCC-ee--eCCCCCCCchHHHHHHHhcCC-
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-A---FGMT-DF--INPDDEPNKSISELVKEMTHG- 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~---lga~-~v--~~~~~~~~~~~~~~~~~~~~~- 266 (332)
.+++++|+|+ |++|..++..+...|+ +|+++++++++.+.+. + .+.. .. .|..+ .+++...+.+....
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALERF 80 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHc
Confidence 5688999998 9999999999999999 9999999887654332 2 2332 11 23322 23333333322111
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
..+|++|.+.|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 258999998874
No 324
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.054 Score=50.25 Aligned_cols=80 Identities=21% Similarity=0.351 Sum_probs=51.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHc----C-CC-ee--eCCCCCCCchHHHHHHHhcC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAF----G-MT-DF--INPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~l----g-a~-~v--~~~~~~~~~~~~~~~~~~~~ 265 (332)
.|++++|+|+ +++|.++++.+...|+ +|+++.++.++.+.+ +++ + .. .+ .|..+ .++..+.+.+...
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~sv~~~~~~~~~ 89 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS--LASVAALGEQLRA 89 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC--HHHHHHHHHHHHH
Confidence 4688999998 9999999999988998 999999988765432 222 1 11 12 23332 2333333333211
Q ss_pred -CCCccEEEEcCCC
Q 043260 266 -GTGVDYGFECTGV 278 (332)
Q Consensus 266 -~~g~d~vid~~g~ 278 (332)
....|++|+++|.
T Consensus 90 ~~~~iD~li~nAG~ 103 (313)
T PRK05854 90 EGRPIHLLINNAGV 103 (313)
T ss_pred hCCCccEEEECCcc
Confidence 1258999998874
No 325
>PLN03139 formate dehydrogenase; Provisional
Probab=95.86 E-value=0.082 Score=50.55 Aligned_cols=45 Identities=18% Similarity=0.319 Sum_probs=36.6
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcC
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFG 241 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lg 241 (332)
.|++|.|+|.|.+|...++.++.+|. +|++.+++..+.+..++.|
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g 242 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETG 242 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcC
Confidence 57899999999999999999999999 8999988754444344444
No 326
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.85 E-value=0.033 Score=50.64 Aligned_cols=81 Identities=21% Similarity=0.179 Sum_probs=53.9
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchH----HHHHHcC-C-CeeeCCCC-CCCchHHHHHHHhcCC
Q 043260 195 EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRK----DKGEAFG-M-TDFINPDD-EPNKSISELVKEMTHG 266 (332)
Q Consensus 195 ~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~----~~~~~lg-a-~~v~~~~~-~~~~~~~~~~~~~~~~ 266 (332)
-.|+.|||+|+ +++|.+.++-...+|+ +++++|.+.+-. +..++.| + .++.|-.+ ++-....+.+++..+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G- 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG- 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC-
Confidence 36899999988 8999998888888998 899999887543 2344445 1 23334333 012223344444443
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
.+|++++++|-
T Consensus 114 -~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 -DVDILVNNAGI 124 (300)
T ss_pred -CceEEEecccc
Confidence 58999999884
No 327
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.85 E-value=0.059 Score=46.60 Aligned_cols=101 Identities=16% Similarity=0.176 Sum_probs=59.9
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcch-------------------H----HHHHHcCCCeeeCCCCCC
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCR-------------------K----DKGEAFGMTDFINPDDEP 252 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~-------------------~----~~~~~lga~~v~~~~~~~ 252 (332)
...+|+|+|+|++|.-++..+...|.+++.++|.+.-. . +.++++..+..+....
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~-- 97 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT-- 97 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe--
Confidence 45679999999999999999999999999999865321 1 1234444443222211
Q ss_pred CchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcC
Q 043260 253 NKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
..+.+...+.. .++|+|+++..+.......-+.....+-.++..+.
T Consensus 98 -~~~~~~~~~~~--~~~dvVi~~~~~~~~~~~ln~~c~~~~ip~i~~~~ 143 (197)
T cd01492 98 -DDISEKPEEFF--SQFDVVVATELSRAELVKINELCRKLGVKFYATGV 143 (197)
T ss_pred -cCccccHHHHH--hCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 11111112222 26899999988765544444555544134444443
No 328
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.84 E-value=0.05 Score=50.51 Aligned_cols=79 Identities=19% Similarity=0.246 Sum_probs=51.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcC---CC-ee--eCCCCCCCchHHHHHHHhc-CC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFG---MT-DF--INPDDEPNKSISELVKEMT-HG 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lg---a~-~v--~~~~~~~~~~~~~~~~~~~-~~ 266 (332)
.+++++|+|+ |++|..+++.+...|. +|++++++.++.+.+ +++. .. .+ .|..+ .++..+.+.+.. ..
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence 4678999998 9999999999888998 999999888776533 3332 11 12 23322 233333333321 12
Q ss_pred CCccEEEEcCC
Q 043260 267 TGVDYGFECTG 277 (332)
Q Consensus 267 ~g~d~vid~~g 277 (332)
..+|++|+++|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 25899999987
No 329
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.076 Score=47.49 Aligned_cols=77 Identities=14% Similarity=0.259 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH-Hc----CCC-eee--CCCCCCCchHHHHHHHhcCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE-AF----GMT-DFI--NPDDEPNKSISELVKEMTHG 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~-~l----ga~-~v~--~~~~~~~~~~~~~~~~~~~~ 266 (332)
.++++||+|+ +++|..+++.+...|+ +|++++++.++.+.+. ++ +.. ..+ |..+ .+++.+.+.+ . +
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~-~-g 80 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS--PEAREQLAAE-A-G 80 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHH-h-C
Confidence 4789999998 9999999999999999 9999999887665432 12 322 222 2222 2333333332 2 2
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
.+|++|.+.|.
T Consensus 81 -~id~lv~~ag~ 91 (259)
T PRK06125 81 -DIDILVNNAGA 91 (259)
T ss_pred -CCCEEEECCCC
Confidence 68999999874
No 330
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.061 Score=48.08 Aligned_cols=73 Identities=21% Similarity=0.395 Sum_probs=47.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcc-hHHHHHHcCCCeee--CCCCCCCchHHHHHHHhcCCCCccE
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPC-RKDKGEAFGMTDFI--NPDDEPNKSISELVKEMTHGTGVDY 271 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~-~~~~~~~lga~~v~--~~~~~~~~~~~~~~~~~~~~~g~d~ 271 (332)
.+++++|+|+ |++|..+++.+...|+ +|++++++.. +.+... .+....+ |..+ . +.+.+..+ +.|+
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~---~---~~~~~~~~--~iDi 82 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECGK---E---ESLDKQLA--SLDV 82 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCCC---H---HHHHHhcC--CCCE
Confidence 4688999998 9999999999999999 9999888762 222211 1212222 2222 1 12333332 5999
Q ss_pred EEEcCCC
Q 043260 272 GFECTGV 278 (332)
Q Consensus 272 vid~~g~ 278 (332)
+|+++|.
T Consensus 83 lVnnAG~ 89 (245)
T PRK12367 83 LILNHGI 89 (245)
T ss_pred EEECCcc
Confidence 9999875
No 331
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.81 E-value=0.13 Score=43.06 Aligned_cols=85 Identities=22% Similarity=0.324 Sum_probs=60.7
Q ss_pred CCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcch-HHHHHHcCCCeeeCCCCC-CCchHHHHHHHhcCCC-Cc
Q 043260 194 VEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCR-KDKGEAFGMTDFINPDDE-PNKSISELVKEMTHGT-GV 269 (332)
Q Consensus 194 ~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~-~~~~~~lga~~v~~~~~~-~~~~~~~~~~~~~~~~-g~ 269 (332)
..+|-..||.|. +++|.+++..+...|+ .++..|....+ .+.++++|...++.+.+. ++.+...++...-+.. ..
T Consensus 6 s~kglvalvtggasglg~ataerlakqga-sv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrl 84 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGA-SVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRL 84 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCc-eEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccce
Confidence 356777788865 9999999999999999 89998877655 568899998877766553 2344444443322221 37
Q ss_pred cEEEEcCCCh
Q 043260 270 DYGFECTGVA 279 (332)
Q Consensus 270 d~vid~~g~~ 279 (332)
|+.++|.|..
T Consensus 85 d~~vncagia 94 (260)
T KOG1199|consen 85 DALVNCAGIA 94 (260)
T ss_pred eeeeecccee
Confidence 9999999873
No 332
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.81 E-value=0.043 Score=47.31 Aligned_cols=97 Identities=16% Similarity=0.234 Sum_probs=59.6
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH----cCCCeeeCCCCCCCchHHHHHHHhcC
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA----FGMTDFINPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~~~~~~~ 265 (332)
+.....++.+||-+|+|. |..+..+++ .|. +|+++|.+++-.+.+++ .+.. +.... .+... . .. .
T Consensus 24 ~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~---~d~~~-~-~~-~ 92 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA---YDINA-A-AL-N 92 (195)
T ss_pred HHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe---ccchh-c-cc-c
Confidence 444555667899999866 667777766 577 99999999877665543 2322 11110 11100 0 11 2
Q ss_pred CCCccEEEEcCC-----C---hHHHHHHHHHhccCCcEEEEE
Q 043260 266 GTGVDYGFECTG-----V---ASLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 266 ~~g~d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~ 299 (332)
+ .+|+|+.+.. . ...+..+.+.|+++ |.++.+
T Consensus 93 ~-~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~ 132 (195)
T TIGR00477 93 E-DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIV 132 (195)
T ss_pred C-CCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEE
Confidence 2 6999987532 1 24677888999998 985554
No 333
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=95.79 E-value=0.069 Score=49.06 Aligned_cols=37 Identities=19% Similarity=0.377 Sum_probs=31.9
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPC 232 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~ 232 (332)
.++++||+|+|+.+.+++..+...|+++|+++.|+++
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~ 159 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDE 159 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 5678999999988998877777889889999999854
No 334
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.79 E-value=0.032 Score=46.09 Aligned_cols=82 Identities=21% Similarity=0.229 Sum_probs=50.9
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCC--cchHH-H---HHHcCCC-eeeCCCCCCCchHHHHHHHhc-CCCC
Q 043260 198 SSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKN--PCRKD-K---GEAFGMT-DFINPDDEPNKSISELVKEMT-HGTG 268 (332)
Q Consensus 198 ~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~--~~~~~-~---~~~lga~-~v~~~~~~~~~~~~~~~~~~~-~~~g 268 (332)
+++||+|+ +++|...++.+...|...|+++.++ .++.+ + ++..+.. .++..+-.+.++..+.+.+.. ....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 47899998 9999999988888877688889888 34333 2 2334532 222221112344444444432 1225
Q ss_pred ccEEEEcCCCh
Q 043260 269 VDYGFECTGVA 279 (332)
Q Consensus 269 ~d~vid~~g~~ 279 (332)
.|++|.+.|..
T Consensus 81 ld~li~~ag~~ 91 (167)
T PF00106_consen 81 LDILINNAGIF 91 (167)
T ss_dssp ESEEEEECSCT
T ss_pred ccccccccccc
Confidence 89999998863
No 335
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.78 E-value=0.15 Score=48.98 Aligned_cols=107 Identities=18% Similarity=0.222 Sum_probs=64.1
Q ss_pred hCCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHH-------HHHHc-CCCee-eCCCCCCCchHHHHHH
Q 043260 192 FKVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKD-------KGEAF-GMTDF-INPDDEPNKSISELVK 261 (332)
Q Consensus 192 ~~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~-------~~~~l-ga~~v-~~~~~~~~~~~~~~~~ 261 (332)
.....+.+|||+|+ |.+|..+++.+...|. +|++++++..+.+ ..... +...+ .|..+ .+++.+.+.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~ 131 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLF 131 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHH
Confidence 34567789999998 9999999999988998 8999988765421 11122 22222 23332 233333333
Q ss_pred HhcCCCCccEEEEcCCCh------------HHHHHHHHHhccCC-cEEEEEcCCC
Q 043260 262 EMTHGTGVDYGFECTGVA------------SLISEALEATKLGK-GKVMAIGAAN 303 (332)
Q Consensus 262 ~~~~~~g~d~vid~~g~~------------~~~~~~~~~l~~~~-G~~v~~G~~~ 303 (332)
+. +.++|+||+|.+.. .....+++.+...+ +++|.++...
T Consensus 132 ~~--~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~ 184 (390)
T PLN02657 132 SE--GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC 184 (390)
T ss_pred Hh--CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence 22 11699999988642 01223445444431 4688887654
No 336
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.78 E-value=0.055 Score=48.30 Aligned_cols=80 Identities=21% Similarity=0.314 Sum_probs=51.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcch--HHHHHHcCCCe-e--eCCCCCCCchHHHHHHHhcC-CCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCR--KDKGEAFGMTD-F--INPDDEPNKSISELVKEMTH-GTG 268 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~--~~~~~~lga~~-v--~~~~~~~~~~~~~~~~~~~~-~~g 268 (332)
.++++||+|+ +++|.++++.+...|+ +|++++++... .+..++.+.+. . .|..+ .++..+.+.+... -.+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcCC
Confidence 5788999998 9999999999999999 89888775422 22334455432 2 23333 3334333333211 115
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
+|+++++.|.
T Consensus 84 iD~lv~~ag~ 93 (251)
T PRK12481 84 IDILINNAGI 93 (251)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 337
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.046 Score=48.80 Aligned_cols=82 Identities=18% Similarity=0.206 Sum_probs=52.4
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHH----HHHHcCCCee---eCCCCCCCchHHHHHHHhcC-
Q 043260 195 EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKD----KGEAFGMTDF---INPDDEPNKSISELVKEMTH- 265 (332)
Q Consensus 195 ~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~----~~~~lga~~v---~~~~~~~~~~~~~~~~~~~~- 265 (332)
-++++++|+|+ |++|..+++.+...|++.|++++++.++.+ .+++.+.... .|..+ .+++.+.+.....
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEA 81 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 35688999998 999999999999999944999998876554 2233444321 23332 2333333322210
Q ss_pred CCCccEEEEcCCC
Q 043260 266 GTGVDYGFECTGV 278 (332)
Q Consensus 266 ~~g~d~vid~~g~ 278 (332)
-.++|++|++.+.
T Consensus 82 ~g~id~li~~ag~ 94 (260)
T PRK06198 82 FGRLDALVNAAGL 94 (260)
T ss_pred hCCCCEEEECCCc
Confidence 0258999999874
No 338
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.058 Score=47.77 Aligned_cols=78 Identities=19% Similarity=0.236 Sum_probs=50.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HH---cCCC-ee--eCCCCCCCchHHH---HHHHhc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EA---FGMT-DF--INPDDEPNKSISE---LVKEMT 264 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~---lga~-~v--~~~~~~~~~~~~~---~~~~~~ 264 (332)
.++++||+|+ |.+|..+++.+...|. +|+++++++++.+.+ .+ .+.. .. .|..+ ..+..+ .+.+..
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF 81 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 5678999998 9999999999988998 899999887655332 22 2222 12 23322 222222 222222
Q ss_pred CCCCccEEEEcCCC
Q 043260 265 HGTGVDYGFECTGV 278 (332)
Q Consensus 265 ~~~g~d~vid~~g~ 278 (332)
+ ++|+||.++|.
T Consensus 82 ~--~id~vi~~ag~ 93 (250)
T PRK07774 82 G--GIDYLVNNAAI 93 (250)
T ss_pred C--CCCEEEECCCC
Confidence 2 58999999883
No 339
>PRK08264 short chain dehydrogenase; Validated
Probab=95.77 E-value=0.067 Score=47.02 Aligned_cols=75 Identities=21% Similarity=0.336 Sum_probs=50.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCC-eee--CCCCCCCchHHHHHHHhcCCCCccE
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMT-DFI--NPDDEPNKSISELVKEMTHGTGVDY 271 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~-~v~--~~~~~~~~~~~~~~~~~~~~~g~d~ 271 (332)
.+++++|+|+ |.+|..+++.+...|.++|++++++.++.+. .+.. .++ |..+ .+++.+.+.+ . ..+|+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~--~~~~~~~~~~-~--~~id~ 76 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD--PASVAAAAEA-A--SDVTI 76 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC--HHHHHHHHHh-c--CCCCE
Confidence 5678999998 9999999999999998689999888766543 3322 222 2222 2333333322 2 24899
Q ss_pred EEEcCCC
Q 043260 272 GFECTGV 278 (332)
Q Consensus 272 vid~~g~ 278 (332)
||.+.|.
T Consensus 77 vi~~ag~ 83 (238)
T PRK08264 77 LVNNAGI 83 (238)
T ss_pred EEECCCc
Confidence 9999886
No 340
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.058 Score=47.80 Aligned_cols=80 Identities=16% Similarity=0.193 Sum_probs=51.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHc--CCC-eee--CCCCCCCchHHHHHHHhcC-CC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAF--GMT-DFI--NPDDEPNKSISELVKEMTH-GT 267 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~l--ga~-~v~--~~~~~~~~~~~~~~~~~~~-~~ 267 (332)
++++++|+|+ |.+|..+++.+...|+ +|+++.++.++.+.. .++ +.. ..+ |..+ .++..+.+.+... -.
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~ 80 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS--AEAVEALVDFVAARWG 80 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence 4678999998 9999999998888898 899999887665432 222 322 222 2222 2333333332211 12
Q ss_pred CccEEEEcCCC
Q 043260 268 GVDYGFECTGV 278 (332)
Q Consensus 268 g~d~vid~~g~ 278 (332)
++|+||.+.+.
T Consensus 81 ~id~vi~~ag~ 91 (252)
T PRK06138 81 RLDVLVNNAGF 91 (252)
T ss_pred CCCEEEECCCC
Confidence 68999999884
No 341
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.76 E-value=0.068 Score=48.56 Aligned_cols=92 Identities=17% Similarity=0.146 Sum_probs=59.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHH-HHHcC---CCeeeCCCCCCCchHHHHHHHhcCCCCcc
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDK-GEAFG---MTDFINPDDEPNKSISELVKEMTHGTGVD 270 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~-~~~lg---a~~v~~~~~~~~~~~~~~~~~~~~~~g~d 270 (332)
..+++++|+|+|++|.+++..+...|. +|++++++.++.+. ++++. ....... . + .. ...+|
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~-----~---~----~~-~~~~D 180 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSM-----D---E----LP-LHRVD 180 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEech-----h---h----hc-ccCcc
Confidence 457889999999999999988888898 99999998877653 34432 2122211 1 0 11 12589
Q ss_pred EEEEcCCChH--HH---HHHHHHhccCCcEEEEEcC
Q 043260 271 YGFECTGVAS--LI---SEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 271 ~vid~~g~~~--~~---~~~~~~l~~~~G~~v~~G~ 301 (332)
+||++++..- .. ....+.++++ ..++.+.-
T Consensus 181 ivInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y 215 (270)
T TIGR00507 181 LIINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY 215 (270)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence 9999998631 11 1124567776 67777744
No 342
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.76 E-value=0.18 Score=43.75 Aligned_cols=113 Identities=12% Similarity=0.018 Sum_probs=63.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcch-HHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEE
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCR-KDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFE 274 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~-~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid 274 (332)
.|.+|||+|+|.+|...+..+...|+ +|++++....+ +..+.+.+. ..+.... +.+. . -.++|+||-
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~-i~~~~~~-----~~~~--~---l~~adlVia 76 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGK-IRWKQKE-----FEPS--D---IVDAFLVIA 76 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCC-EEEEecC-----CChh--h---cCCceEEEE
Confidence 57899999999999999988888997 89988754322 121111121 1111111 1100 1 136899999
Q ss_pred cCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHhHhc--CcEEEEe
Q 043260 275 CTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPAIAL--GRNLKGT 323 (332)
Q Consensus 275 ~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~--~~~i~g~ 323 (332)
+++++ .++..+...+.. +.++..-... ....|-+..++. ++.|.-|
T Consensus 77 aT~d~-elN~~i~~~a~~-~~lvn~~d~~-~~~~f~~Pa~~~~g~l~iaIs 124 (202)
T PRK06718 77 ATNDP-RVNEQVKEDLPE-NALFNVITDA-ESGNVVFPSALHRGKLTISVS 124 (202)
T ss_pred cCCCH-HHHHHHHHHHHh-CCcEEECCCC-ccCeEEEeeEEEcCCeEEEEE
Confidence 99996 555555544454 5555443332 223444333333 4444333
No 343
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=95.76 E-value=0.14 Score=45.98 Aligned_cols=107 Identities=16% Similarity=0.175 Sum_probs=62.2
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHcCCCeEEEEcCCcc------hHHHHHHcCCC-eeeCCCCCCCchHHHHHHHhcC
Q 043260 196 KGSSVAVFGL---GAVGLGVMDRARIQGAAKIIGIDKNPC------RKDKGEAFGMT-DFINPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 196 ~g~~vlV~G~---g~vG~~~~~la~~~G~~~Vi~~~~~~~------~~~~~~~lga~-~v~~~~~~~~~~~~~~~~~~~~ 265 (332)
.|++++|+|+ +++|.++++.+...|+ +|+++.++.+ ..+.+++.+.. ..+..+-.+.++..+.+.+...
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 4788999996 4899999999999999 8887754332 12222222221 2221111123344333333221
Q ss_pred C-CCccEEEEcCCCh-------H----------------------HHHHHHHHhccCCcEEEEEcCCCC
Q 043260 266 G-TGVDYGFECTGVA-------S----------------------LISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 266 ~-~g~d~vid~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
. ..+|++|++.|.. . ..+.++..+.++ |+++.+++..+
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~~~ 151 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYLGG 151 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecccc
Confidence 1 1589999998731 0 123455566676 99988876543
No 344
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]
Probab=95.75 E-value=0.064 Score=46.59 Aligned_cols=102 Identities=19% Similarity=0.167 Sum_probs=77.2
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCc
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGV 269 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~ 269 (332)
....+.+-..|+=+|+|+ |.+..+|++......|..+|++++=++.+++...+.-+... .++.+.+....
T Consensus 24 a~Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f~~a---------Dl~~w~p~~~~ 93 (257)
T COG4106 24 ARVPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATFEEA---------DLRTWKPEQPT 93 (257)
T ss_pred hhCCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCceecc---------cHhhcCCCCcc
Confidence 334556677788889998 99999999999876999999999999888877665443332 36777777788
Q ss_pred cEEEEcCC------ChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 270 DYGFECTG------VASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 270 d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
|++|.+.. ....+...+..|.|+ |.+. +.++.
T Consensus 94 dllfaNAvlqWlpdH~~ll~rL~~~L~Pg-g~LA-VQmPd 131 (257)
T COG4106 94 DLLFANAVLQWLPDHPELLPRLVSQLAPG-GVLA-VQMPD 131 (257)
T ss_pred chhhhhhhhhhccccHHHHHHHHHhhCCC-ceEE-EECCC
Confidence 99988654 346789999999997 7643 34443
No 345
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.75 E-value=0.091 Score=46.72 Aligned_cols=104 Identities=16% Similarity=0.205 Sum_probs=67.1
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHH----cCCCeeeCCCCCCCchHHHHHHHhc
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQG-AAKIIGIDKNPCRKDKGEA----FGMTDFINPDDEPNKSISELVKEMT 264 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~~~~~~ 264 (332)
...+..++++||-+|.|. |..++.+++..+ ..+|+.++.+++..+.+++ .|.+.-+.... .+..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~l~ 137 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQLL 137 (234)
T ss_pred HHHHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHHHH
Confidence 445667788999999744 666666676653 3489999999988776644 45432221111 23334444442
Q ss_pred C---CCCccEEEEcCCC---hHHHHHHHHHhccCCcEEEE
Q 043260 265 H---GTGVDYGFECTGV---ASLISEALEATKLGKGKVMA 298 (332)
Q Consensus 265 ~---~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~ 298 (332)
. ...||+||--..- ...+..+++.++++ |.+++
T Consensus 138 ~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~ 176 (234)
T PLN02781 138 NNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAF 176 (234)
T ss_pred hCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEE
Confidence 1 2379999965432 24578889999998 98875
No 346
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.083 Score=45.92 Aligned_cols=76 Identities=14% Similarity=0.133 Sum_probs=47.1
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH-cCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEc
Q 043260 198 SSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA-FGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFEC 275 (332)
Q Consensus 198 ~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~ 275 (332)
+++||+|+ |.+|..++..+... . +|++++++.++.+.+.+ ...-+++..+-.+.+++.+.+.+. .+.|.||.+
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---~~id~vi~~ 78 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL---GRLDVLVHN 78 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc---CCCCEEEEC
Confidence 57999998 99999988877766 6 89999998777654432 211222222210122332322221 168999999
Q ss_pred CCC
Q 043260 276 TGV 278 (332)
Q Consensus 276 ~g~ 278 (332)
.|.
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 874
No 347
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.74 E-value=0.053 Score=55.71 Aligned_cols=78 Identities=23% Similarity=0.319 Sum_probs=53.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcc---------------------hHHHHHHcCCCeeeCCCCCCC
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPC---------------------RKDKGEAFGMTDFINPDDEPN 253 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~---------------------~~~~~~~lga~~v~~~~~~~~ 253 (332)
..+++|+|+|+|+.|+.++..++..|. +|+++++.+. +.+.++++|.+...+..-...
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 358899999999999999999999999 8999987543 345567788654443321000
Q ss_pred chHHHHHHHhcCCCCccEEEEcCCCh
Q 043260 254 KSISELVKEMTHGTGVDYGFECTGVA 279 (332)
Q Consensus 254 ~~~~~~~~~~~~~~g~d~vid~~g~~ 279 (332)
..+ .++. .+||.||.++|..
T Consensus 404 i~~----~~~~--~~~DavilAtGa~ 423 (654)
T PRK12769 404 ISL----ESLL--EDYDAVFVGVGTY 423 (654)
T ss_pred CCH----HHHH--hcCCEEEEeCCCC
Confidence 111 1121 2699999998863
No 348
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.072 Score=46.98 Aligned_cols=80 Identities=10% Similarity=0.063 Sum_probs=51.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe-ee--CCCCCCCchHHHHHHHhcC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD-FI--NPDDEPNKSISELVKEMTH-G 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v~--~~~~~~~~~~~~~~~~~~~-~ 266 (332)
.+++++|+|+ |.+|..++..+...|. +|+++++++++.+.+ ++.+... ++ |..+ .+++.+.+.+... -
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN--PEAIAPGIAELLEQF 81 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4578999998 9999999999999999 999999987765433 2233221 22 2222 2333333332211 1
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
.+.|++|.+.|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 258999999884
No 349
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.045 Score=48.27 Aligned_cols=81 Identities=20% Similarity=0.290 Sum_probs=51.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-H---HcCCCe----eeCCCCCCCchHH---HHHHHh
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-E---AFGMTD----FINPDDEPNKSIS---ELVKEM 263 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~---~lga~~----v~~~~~~~~~~~~---~~~~~~ 263 (332)
++++++|+|+ |++|..+++.+...|. +|+++++++++.+.+ . +.+... ..|..+...+++. +.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4678999998 9999999999998999 899999988766533 2 222111 1222110012222 233333
Q ss_pred cCCCCccEEEEcCCC
Q 043260 264 THGTGVDYGFECTGV 278 (332)
Q Consensus 264 ~~~~g~d~vid~~g~ 278 (332)
..+ ..|+||.++|.
T Consensus 84 ~~~-~id~vi~~ag~ 97 (239)
T PRK08703 84 TQG-KLDGIVHCAGY 97 (239)
T ss_pred hCC-CCCEEEEeccc
Confidence 323 68999999884
No 350
>PRK08317 hypothetical protein; Provisional
Probab=95.71 E-value=0.12 Score=45.26 Aligned_cols=102 Identities=21% Similarity=0.342 Sum_probs=69.0
Q ss_pred HHhhCCCCCCEEEEECCChHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHHc----CCC-eeeCCCCCCCchHHHHHHH
Q 043260 189 WKEFKVEKGSSVAVFGLGAVGLGVMDRARIQG-AAKIIGIDKNPCRKDKGEAF----GMT-DFINPDDEPNKSISELVKE 262 (332)
Q Consensus 189 ~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G-~~~Vi~~~~~~~~~~~~~~l----ga~-~v~~~~~~~~~~~~~~~~~ 262 (332)
.+..++.++++||.+|+|. |..+..+++..+ ..++++++.+++.++.+++. +.. .+...+. .+. .
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~-----~ 82 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL-----P 82 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----C
Confidence 3566788999999999977 888888888773 34899999999888877664 111 1221111 100 1
Q ss_pred hcCCCCccEEEEcC-----CC-hHHHHHHHHHhccCCcEEEEEcC
Q 043260 263 MTHGTGVDYGFECT-----GV-ASLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 263 ~~~~~g~d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
.. ...||+|+... .+ ...+..+.+.|+++ |.+++...
T Consensus 83 ~~-~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 125 (241)
T PRK08317 83 FP-DGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLDT 125 (241)
T ss_pred CC-CCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEec
Confidence 11 23689988642 22 24678999999998 99887653
No 351
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.065 Score=49.36 Aligned_cols=80 Identities=15% Similarity=0.195 Sum_probs=51.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHc-----CCC-eee--CCCCCCCchHHHHHHHhcC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAF-----GMT-DFI--NPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~l-----ga~-~v~--~~~~~~~~~~~~~~~~~~~ 265 (332)
.+++++|+|+ |++|..+++.+...|. +|+++.++.++.+.+ +++ +.. ..+ |..+ .++..+.+.+...
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~ 91 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS--LASVRAAADALRA 91 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC--HHHHHHHHHHHHh
Confidence 5788999998 9999999998888998 899998887665422 221 121 122 3322 2333333333321
Q ss_pred -CCCccEEEEcCCC
Q 043260 266 -GTGVDYGFECTGV 278 (332)
Q Consensus 266 -~~g~d~vid~~g~ 278 (332)
-.++|++|.++|.
T Consensus 92 ~~~~iD~li~nAg~ 105 (306)
T PRK06197 92 AYPRIDLLINNAGV 105 (306)
T ss_pred hCCCCCEEEECCcc
Confidence 1258999999873
No 352
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.17 Score=44.96 Aligned_cols=80 Identities=19% Similarity=0.255 Sum_probs=49.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEE-cCCcchHHH-HHHc---CCC-eee--CCCCCCCchHHHHHHHhc--
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGI-DKNPCRKDK-GEAF---GMT-DFI--NPDDEPNKSISELVKEMT-- 264 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~-~~~~~~~~~-~~~l---ga~-~v~--~~~~~~~~~~~~~~~~~~-- 264 (332)
.+.+++|+|+ |.+|..+++.+...|. +|++. .++.++.+. ..++ +.. .++ |..+ .+++.+.+.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~i~~~~~~~~~~ 81 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS--IDGVKKLVEQLKNE 81 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC--HHHHHHHHHHHHHH
Confidence 3578999998 9999999999988998 77664 566655432 2222 322 122 3322 334443333321
Q ss_pred -----CCCCccEEEEcCCC
Q 043260 265 -----HGTGVDYGFECTGV 278 (332)
Q Consensus 265 -----~~~g~d~vid~~g~ 278 (332)
+..++|++|.+.|.
T Consensus 82 ~~~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 82 LQIRVGTSEIDILVNNAGI 100 (254)
T ss_pred hccccCCCCccEEEECCCC
Confidence 11368999998874
No 353
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.061 Score=47.78 Aligned_cols=79 Identities=16% Similarity=0.172 Sum_probs=50.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-H---HcCCC-eee--CCCCCCCchHHHHHHHhcCC-
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-E---AFGMT-DFI--NPDDEPNKSISELVKEMTHG- 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~---~lga~-~v~--~~~~~~~~~~~~~~~~~~~~- 266 (332)
++++++|+|+ |.+|...++.+...|. +|++++++.++.+.+ + +.+.. ..+ +..+ ..+..+.+.+....
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE--MEQIDALFAHIRERH 83 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4578999998 9999999999999998 999999887665433 2 22322 222 2222 23333333322111
Q ss_pred CCccEEEEcCC
Q 043260 267 TGVDYGFECTG 277 (332)
Q Consensus 267 ~g~d~vid~~g 277 (332)
...|+++.+.+
T Consensus 84 ~~id~li~~ag 94 (252)
T PRK07035 84 GRLDILVNNAA 94 (252)
T ss_pred CCCCEEEECCC
Confidence 14899999887
No 354
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.044 Score=48.74 Aligned_cols=80 Identities=23% Similarity=0.361 Sum_probs=51.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCC-eeeCCCCCCCchHHHHHH---HhcCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMT-DFINPDDEPNKSISELVK---EMTHG 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~~~---~~~~~ 266 (332)
++++++|+|+ |++|..+++.+...|. +|+++++++++.+.+ ++.+.. ..+..+-....++.+.+. +.. +
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY-G 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-C
Confidence 4689999998 9999999998888998 899999987765432 333432 222111111223333222 222 2
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
.+|++|.+.|.
T Consensus 84 -~id~li~~ag~ 94 (253)
T PRK06172 84 -RLDYAFNNAGI 94 (253)
T ss_pred -CCCEEEECCCC
Confidence 58999998874
No 355
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.69 E-value=0.073 Score=49.46 Aligned_cols=36 Identities=14% Similarity=0.253 Sum_probs=32.5
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPC 232 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~ 232 (332)
.|++|.|+|.|.+|...++.++.+|+ +|++.+++.+
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~ 170 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK 170 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence 57899999999999999999999999 9999987654
No 356
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.68 E-value=0.071 Score=48.34 Aligned_cols=82 Identities=16% Similarity=0.229 Sum_probs=50.6
Q ss_pred CCCCEEEEECC---ChHHHHHHHHHHHcCCCeEEEEcCCc---chHH-HHHHcCCCeeeCCCCCCCchHHHHHHHhcCC-
Q 043260 195 EKGSSVAVFGL---GAVGLGVMDRARIQGAAKIIGIDKNP---CRKD-KGEAFGMTDFINPDDEPNKSISELVKEMTHG- 266 (332)
Q Consensus 195 ~~g~~vlV~G~---g~vG~~~~~la~~~G~~~Vi~~~~~~---~~~~-~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~- 266 (332)
-.++++||+|+ +++|.++++.+...|+ +|+++.+++ ++.+ +.++++....+..+-.+.++..+.+.+....
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 35788999987 5899999999999999 898887654 2222 2344553322222221234444444333211
Q ss_pred CCccEEEEcCC
Q 043260 267 TGVDYGFECTG 277 (332)
Q Consensus 267 ~g~d~vid~~g 277 (332)
...|++|++.|
T Consensus 87 g~iD~lv~nAG 97 (272)
T PRK08159 87 GKLDFVVHAIG 97 (272)
T ss_pred CCCcEEEECCc
Confidence 15899999987
No 357
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=95.68 E-value=0.084 Score=48.19 Aligned_cols=89 Identities=17% Similarity=0.278 Sum_probs=59.3
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCC
Q 043260 199 SVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGV 278 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~ 278 (332)
+|.|+|.|.+|...+..++..|. +|+++++++++.+.+.+.|...... .+. +.+ ..+|+||.|+..
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~~------~~~-~~~------~~aDlVilavp~ 67 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEAS------TDL-SLL------KDCDLVILALPI 67 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccccc------CCH-hHh------cCCCEEEEcCCH
Confidence 68899999999998888888898 8999999998888888877422111 111 111 257899998886
Q ss_pred hHH---HHHHHHHhccCCcEEEEEcCC
Q 043260 279 ASL---ISEALEATKLGKGKVMAIGAA 302 (332)
Q Consensus 279 ~~~---~~~~~~~l~~~~G~~v~~G~~ 302 (332)
... +......++++ ..+..+++.
T Consensus 68 ~~~~~~~~~l~~~l~~~-~ii~d~~Sv 93 (279)
T PRK07417 68 GLLLPPSEQLIPALPPE-AIVTDVGSV 93 (279)
T ss_pred HHHHHHHHHHHHhCCCC-cEEEeCcch
Confidence 422 23333344444 455555543
No 358
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.16 Score=44.71 Aligned_cols=106 Identities=17% Similarity=0.203 Sum_probs=62.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcch-HH----HHHHcCCC-eeeCCCCCCCchHHHHHHHhcC-CC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCR-KD----KGEAFGMT-DFINPDDEPNKSISELVKEMTH-GT 267 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~-~~----~~~~lga~-~v~~~~~~~~~~~~~~~~~~~~-~~ 267 (332)
++++++|+|+ |++|..+++.+...|. +++++.++... .+ .+++.+.. ..+..+-...+++.+.+.+... -.
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5688999998 9999999999999999 77776654332 22 22333432 2222211112333333332211 12
Q ss_pred CccEEEEcCCCh-------------------------HHHHHHHHHhccCCcEEEEEcCCC
Q 043260 268 GVDYGFECTGVA-------------------------SLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 268 g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
++|++|.+.|.. ..+..+++.+.+. |+++.++...
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 142 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTSV 142 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeecc
Confidence 589999988841 0123444555666 8999887654
No 359
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.66 E-value=0.21 Score=46.53 Aligned_cols=105 Identities=13% Similarity=0.080 Sum_probs=68.1
Q ss_pred CCCCEEEEECCChHHHHHHHHHH-HcCCCeEEEEcCCcchHHH-HHHc---CCCeeeCCCCCCCchHHHHHHHhcCCCCc
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRAR-IQGAAKIIGIDKNPCRKDK-GEAF---GMTDFINPDDEPNKSISELVKEMTHGTGV 269 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~-~~G~~~Vi~~~~~~~~~~~-~~~l---ga~~v~~~~~~~~~~~~~~~~~~~~~~g~ 269 (332)
....+++|+|+|..|...+..+. ..+.++|.+.+++.++.+. ++++ |.. +... .+..+.+ .++
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~-----~~~~~av------~~a 190 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV-----TDLEAAV------RQA 190 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe-----CCHHHHH------hcC
Confidence 55688999999999999876444 4677799999999888653 3444 322 2111 2222222 258
Q ss_pred cEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHh
Q 043260 270 DYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPA 313 (332)
Q Consensus 270 d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~ 313 (332)
|+|+.++++...+- -.+.++++ -.+..+|......-+++...
T Consensus 191 DIVi~aT~s~~pvl-~~~~l~~g-~~i~~ig~~~~~~~El~~~~ 232 (314)
T PRK06141 191 DIISCATLSTEPLV-RGEWLKPG-THLDLVGNFTPDMRECDDEA 232 (314)
T ss_pred CEEEEeeCCCCCEe-cHHHcCCC-CEEEeeCCCCcccccCCHHH
Confidence 99999988753321 12678887 77778887654455566543
No 360
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=95.66 E-value=0.11 Score=47.76 Aligned_cols=70 Identities=17% Similarity=0.155 Sum_probs=50.0
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCC
Q 043260 199 SVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGV 278 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~ 278 (332)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... .+..+.+ ...|+||.|+..
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~------~~aDivi~~vp~ 65 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA--------ETARQVT------EQADVIFTMVPD 65 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc--------CCHHHHH------hcCCEEEEecCC
Confidence 37889999999998888888998 99999999999888877765321 1122222 136788888776
Q ss_pred hHHHH
Q 043260 279 ASLIS 283 (332)
Q Consensus 279 ~~~~~ 283 (332)
...+.
T Consensus 66 ~~~~~ 70 (291)
T TIGR01505 66 SPQVE 70 (291)
T ss_pred HHHHH
Confidence 53333
No 361
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=95.66 E-value=0.084 Score=44.98 Aligned_cols=93 Identities=20% Similarity=0.238 Sum_probs=59.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe--eeCCCCCCCchHHHHHHHhcCCCCc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD--FINPDDEPNKSISELVKEMTHGTGV 269 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~--v~~~~~~~~~~~~~~~~~~~~~~g~ 269 (332)
++++||-+|+|. |..++.+++.....+|+++|.+++..+.+ ++.+.+. ++..+ .. ++.....|
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d------~~----~~~~~~~f 110 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGR------AE----DFQHEEQF 110 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecc------hh----hccccCCc
Confidence 388899999865 56666666555434899999998766544 3455432 22221 11 11223479
Q ss_pred cEEEEcCC-C-hHHHHHHHHHhccCCcEEEEEc
Q 043260 270 DYGFECTG-V-ASLISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 270 d~vid~~g-~-~~~~~~~~~~l~~~~G~~v~~G 300 (332)
|+|+...- . ++.+..+.+.|+++ |++++.-
T Consensus 111 D~I~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~~ 142 (181)
T TIGR00138 111 DVITSRALASLNVLLELTLNLLKVG-GYFLAYK 142 (181)
T ss_pred cEEEehhhhCHHHHHHHHHHhcCCC-CEEEEEc
Confidence 99987541 1 24567788899998 9988764
No 362
>PRK08643 acetoin reductase; Validated
Probab=95.64 E-value=0.067 Score=47.63 Aligned_cols=79 Identities=16% Similarity=0.207 Sum_probs=50.7
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe-ee--CCCCCCCchHHHHHHHhcC-CC
Q 043260 197 GSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD-FI--NPDDEPNKSISELVKEMTH-GT 267 (332)
Q Consensus 197 g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v~--~~~~~~~~~~~~~~~~~~~-~~ 267 (332)
++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+ ++.+... .+ |..+ .+++.+.+.+... -.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 568999998 9999999999999998 899999887765433 2223321 12 3322 2333333332211 12
Q ss_pred CccEEEEcCCC
Q 043260 268 GVDYGFECTGV 278 (332)
Q Consensus 268 g~d~vid~~g~ 278 (332)
+.|++|.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 58999999874
No 363
>PRK01581 speE spermidine synthase; Validated
Probab=95.63 E-value=0.13 Score=48.46 Aligned_cols=99 Identities=11% Similarity=0.055 Sum_probs=65.7
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcC---------C--CeeeCCCCCCCchHHHHHHHh
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFG---------M--TDFINPDDEPNKSISELVKEM 263 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lg---------a--~~v~~~~~~~~~~~~~~~~~~ 263 (332)
...++|||+|+|. |.++..+++..+..+|++++.+++-.+.++++. . ..+ ... ..+..+.+.+.
T Consensus 149 ~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV-~vv---i~Da~~fL~~~ 223 (374)
T PRK01581 149 IDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRV-NVH---VCDAKEFLSSP 223 (374)
T ss_pred CCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCce-EEE---ECcHHHHHHhc
Confidence 4456899999764 667777777666669999999999999888621 0 111 000 12333445442
Q ss_pred cCCCCccEEEEcCCCh-----------HHHHHHHHHhccCCcEEEEEcC
Q 043260 264 THGTGVDYGFECTGVA-----------SLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 264 ~~~~g~d~vid~~g~~-----------~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
...||+||--...+ +.+..+.+.|+++ |.++.-..
T Consensus 224 --~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 224 --SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred --CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 23699999865432 3567889999998 99877643
No 364
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.62 E-value=0.056 Score=47.37 Aligned_cols=75 Identities=20% Similarity=0.235 Sum_probs=50.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCC-eeeCCCCCCCchHHHHHHHhcCCCCccEEE
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMT-DFINPDDEPNKSISELVKEMTHGTGVDYGF 273 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~~~~~~~~~g~d~vi 273 (332)
++++++|+|+ |.+|..+++.+...|. +|++++++.++ ..... ...|..+ .+++.+.+.+.....+.|++|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi 73 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD--IEQTAATLAQINEIHPVDAIV 73 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEE
Confidence 3578999998 9999999999999998 89999887654 11211 1123322 244444444443333689999
Q ss_pred EcCCC
Q 043260 274 ECTGV 278 (332)
Q Consensus 274 d~~g~ 278 (332)
.+.|.
T Consensus 74 ~~ag~ 78 (234)
T PRK07577 74 NNVGI 78 (234)
T ss_pred ECCCC
Confidence 98874
No 365
>PRK04457 spermidine synthase; Provisional
Probab=95.61 E-value=0.15 Score=46.17 Aligned_cols=95 Identities=13% Similarity=0.119 Sum_probs=66.0
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHc-CC----C--eeeCCCCCCCchHHHHHHHhcCCC
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAF-GM----T--DFINPDDEPNKSISELVKEMTHGT 267 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga----~--~v~~~~~~~~~~~~~~~~~~~~~~ 267 (332)
.++++||++|+|+ |.++..+++.....+|++++.+++-.+.+++. +. + .++. .+..+.+.+. . .
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~-~ 135 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-R-H 135 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-C-C
Confidence 4567899999976 77888888877545899999999999888763 32 1 2222 2333444433 2 3
Q ss_pred CccEEEEcC--C--------ChHHHHHHHHHhccCCcEEEEE
Q 043260 268 GVDYGFECT--G--------VASLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 268 g~d~vid~~--g--------~~~~~~~~~~~l~~~~G~~v~~ 299 (332)
.+|+|+-.. + +.+.+..+.+.|+++ |++++.
T Consensus 136 ~yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 136 STDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred CCCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 699998422 1 136788999999998 998874
No 366
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.60 E-value=0.086 Score=46.94 Aligned_cols=82 Identities=15% Similarity=0.183 Sum_probs=52.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HH---cCCCe-eeCCCCCCCchHHHHHHHhcC-CCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EA---FGMTD-FINPDDEPNKSISELVKEMTH-GTG 268 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~---lga~~-v~~~~~~~~~~~~~~~~~~~~-~~g 268 (332)
.++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ .+ .+... .+..+-.+.+++.+.+.+... -..
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999998 9999999999999998 999999987765432 22 23221 221211122333333333211 125
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
+|+++.+.|.
T Consensus 87 id~vi~~ag~ 96 (254)
T PRK08085 87 IDVLINNAGI 96 (254)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 367
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.60 E-value=0.072 Score=48.17 Aligned_cols=79 Identities=19% Similarity=0.238 Sum_probs=50.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HH---cCCC-eee--CCCCCCCchHHHHHHHhcCC-
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EA---FGMT-DFI--NPDDEPNKSISELVKEMTHG- 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~---lga~-~v~--~~~~~~~~~~~~~~~~~~~~- 266 (332)
.+++++|+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++ .+.. ..+ |..+ ..+....+.+....
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD--KESLEQARQQILEDF 85 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 4688999998 9999999999999999 899999887655432 22 2332 122 2222 23333333322111
Q ss_pred CCccEEEEcCC
Q 043260 267 TGVDYGFECTG 277 (332)
Q Consensus 267 ~g~d~vid~~g 277 (332)
..+|++|.++|
T Consensus 86 g~id~li~~ag 96 (278)
T PRK08277 86 GPCDILINGAG 96 (278)
T ss_pred CCCCEEEECCC
Confidence 25899999987
No 368
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.59 E-value=0.12 Score=46.05 Aligned_cols=101 Identities=15% Similarity=0.153 Sum_probs=60.9
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcC--CCee-eCCCCCCCchHHHHHHHhcCCCCcc
Q 043260 195 EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFG--MTDF-INPDDEPNKSISELVKEMTHGTGVD 270 (332)
Q Consensus 195 ~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lg--a~~v-~~~~~~~~~~~~~~~~~~~~~~g~d 270 (332)
..++++||+|+ |.+|..+++.+...|. +|+++.++.++.......+ ...+ .|..+ . .+.+.+.. +.++|
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~--~~~l~~~~-~~~~d 87 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G--SDKLVEAI-GDDSD 87 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C--HHHHHHHh-hcCCC
Confidence 34678999998 9999999988888898 8998888876654322111 2222 12221 1 12232222 12699
Q ss_pred EEEEcCCChH-------------HHHHHHHHhccC-CcEEEEEcCC
Q 043260 271 YGFECTGVAS-------------LISEALEATKLG-KGKVMAIGAA 302 (332)
Q Consensus 271 ~vid~~g~~~-------------~~~~~~~~l~~~-~G~~v~~G~~ 302 (332)
+||.+.|... ....+++.+... .++++.++..
T Consensus 88 ~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 88 AVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 9999877421 123444544443 2588887765
No 369
>PLN02253 xanthoxin dehydrogenase
Probab=95.58 E-value=0.061 Score=48.71 Aligned_cols=80 Identities=18% Similarity=0.184 Sum_probs=50.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHH-HHHcCC--C-ee--eCCCCCCCchHHHHHHHhcCC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDK-GEAFGM--T-DF--INPDDEPNKSISELVKEMTHG-T 267 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~-~~~lga--~-~v--~~~~~~~~~~~~~~~~~~~~~-~ 267 (332)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+. ..+++. . .. .|..+ .+++.+.+.+.... .
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 4678999998 9999999998888999 89999887665443 333322 1 12 23332 23333333322111 2
Q ss_pred CccEEEEcCCC
Q 043260 268 GVDYGFECTGV 278 (332)
Q Consensus 268 g~d~vid~~g~ 278 (332)
++|++|+++|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 58999998874
No 370
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.58 E-value=0.15 Score=45.07 Aligned_cols=75 Identities=20% Similarity=0.266 Sum_probs=48.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCC-eee--CCCCCCCchHHHHHHHhcC-CCCcc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMT-DFI--NPDDEPNKSISELVKEMTH-GTGVD 270 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~-~v~--~~~~~~~~~~~~~~~~~~~-~~g~d 270 (332)
+++++||+|+ |.+|...++.+...|. +|++++++. ....+.. ..+ |..+ .+++.+.+.+... -..+|
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 78 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD--AAAVAQVCQRLLAETGPLD 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 4688999998 9999999999988998 899998765 2222222 122 2222 2333333333211 12589
Q ss_pred EEEEcCCC
Q 043260 271 YGFECTGV 278 (332)
Q Consensus 271 ~vid~~g~ 278 (332)
++|.+.|.
T Consensus 79 ~vi~~ag~ 86 (252)
T PRK08220 79 VLVNAAGI 86 (252)
T ss_pred EEEECCCc
Confidence 99999875
No 371
>PRK06720 hypothetical protein; Provisional
Probab=95.56 E-value=0.11 Score=43.86 Aligned_cols=82 Identities=22% Similarity=0.215 Sum_probs=51.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-H---HcCCCe-eeCCCCCCCchHHHHHHHhc-CCCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-E---AFGMTD-FINPDDEPNKSISELVKEMT-HGTG 268 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~---~lga~~-v~~~~~~~~~~~~~~~~~~~-~~~g 268 (332)
++++++|+|+ +++|...+..+...|. +|++++++.++.+.. + +.+... .+..+-...+++.+.+.+.. .-.+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5788999998 8999999988888998 899999887655322 2 234332 22222111233333332211 1125
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
.|+++++.|.
T Consensus 94 iDilVnnAG~ 103 (169)
T PRK06720 94 IDMLFQNAGL 103 (169)
T ss_pred CCEEEECCCc
Confidence 8999999885
No 372
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.56 E-value=0.15 Score=39.52 Aligned_cols=93 Identities=17% Similarity=0.194 Sum_probs=61.6
Q ss_pred EEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCCh
Q 043260 200 VAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGVA 279 (332)
Q Consensus 200 vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~ 279 (332)
|+|+|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++..+. .+. +.+++. +-..+|.++-++++.
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~---~~~-~~l~~a-~i~~a~~vv~~~~~d 73 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA---TDP-EVLERA-GIEKADAVVILTDDD 73 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T---TSH-HHHHHT-TGGCESEEEEESSSH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc---hhh-hHHhhc-CccccCEEEEccCCH
Confidence 5788999999999999999665 999999999999999988854 443332 221 223332 334789999998875
Q ss_pred HHH---HHHHHHhccCCcEEEEEc
Q 043260 280 SLI---SEALEATKLGKGKVMAIG 300 (332)
Q Consensus 280 ~~~---~~~~~~l~~~~G~~v~~G 300 (332)
..- ...++.+.+. .+++..-
T Consensus 74 ~~n~~~~~~~r~~~~~-~~ii~~~ 96 (116)
T PF02254_consen 74 EENLLIALLARELNPD-IRIIARV 96 (116)
T ss_dssp HHHHHHHHHHHHHTTT-SEEEEEE
T ss_pred HHHHHHHHHHHHHCCC-CeEEEEE
Confidence 332 2333444444 5655443
No 373
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.55 E-value=0.16 Score=42.23 Aligned_cols=82 Identities=10% Similarity=0.125 Sum_probs=52.9
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFEC 275 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~ 275 (332)
.|.+|+|+|+|.+|.--++.+...|+ +|++++ ++..+.+++++.-.. ..+ .+.+ .+-.++|+||-+
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~-----~~~~-----~dl~~a~lViaa 77 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQK-----TFSN-----DDIKDAHLIYAA 77 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-Eec-----ccCh-----hcCCCceEEEEC
Confidence 67889999999999998888888998 888884 333333444542121 111 1111 112368999999
Q ss_pred CCChHHHHHHHHHhccC
Q 043260 276 TGVASLISEALEATKLG 292 (332)
Q Consensus 276 ~g~~~~~~~~~~~l~~~ 292 (332)
+++. .++..+...++.
T Consensus 78 T~d~-e~N~~i~~~a~~ 93 (157)
T PRK06719 78 TNQH-AVNMMVKQAAHD 93 (157)
T ss_pred CCCH-HHHHHHHHHHHH
Confidence 9995 556555555544
No 374
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.049 Score=49.49 Aligned_cols=80 Identities=19% Similarity=0.231 Sum_probs=51.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-H---HcCCCe-ee--CCCCCCCchHHHHHHHhcC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-E---AFGMTD-FI--NPDDEPNKSISELVKEMTH-G 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~---~lga~~-v~--~~~~~~~~~~~~~~~~~~~-~ 266 (332)
+++++||+|+ |++|.++++.+...|+ +|++++++.++++.+ + ..|.+. .+ |..+ .+++.+.+.+... -
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH--REEVTHLADEAFRLL 81 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence 5788999998 9999999999999999 899999887665532 2 234322 22 2222 2333333322211 1
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
...|++|++.|.
T Consensus 82 g~id~li~nAg~ 93 (275)
T PRK05876 82 GHVDVVFSNAGI 93 (275)
T ss_pred CCCCEEEECCCc
Confidence 158999999873
No 375
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.53 E-value=0.079 Score=47.21 Aligned_cols=80 Identities=15% Similarity=0.301 Sum_probs=52.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe-ee--CCCCCCCchHHHHHHHhc-CC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD-FI--NPDDEPNKSISELVKEMT-HG 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v~--~~~~~~~~~~~~~~~~~~-~~ 266 (332)
.++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++.|... .+ |..+ .+++.+.+.+.. .-
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5789999998 9999999999888999 899999987765432 2233321 12 3322 233333333221 11
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
...|++|.+.|.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 258999999884
No 376
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.53 E-value=0.08 Score=46.80 Aligned_cols=81 Identities=25% Similarity=0.213 Sum_probs=51.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCC-eeeCCCCCCCchHHHHHHHhcCC-CC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMT-DFINPDDEPNKSISELVKEMTHG-TG 268 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~~~~~~~~-~g 268 (332)
+++++||+|+ |.+|..+++.+...|. +|++++++.++.+.+ ++.+.. .++..+-...+++.+.+.+.... .+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4688999998 9999999999999998 899998887665433 222322 22222211123333333332211 25
Q ss_pred ccEEEEcCC
Q 043260 269 VDYGFECTG 277 (332)
Q Consensus 269 ~d~vid~~g 277 (332)
.|++|.+.|
T Consensus 81 ~d~vi~~ag 89 (250)
T TIGR03206 81 VDVLVNNAG 89 (250)
T ss_pred CCEEEECCC
Confidence 899999987
No 377
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=95.52 E-value=0.18 Score=47.21 Aligned_cols=105 Identities=18% Similarity=0.213 Sum_probs=69.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHH-HcCCCeEEEEcCCcchHHH-HHHc----CCCeeeCCCCCCCchHHHHHHHhcCCCC
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRAR-IQGAAKIIGIDKNPCRKDK-GEAF----GMTDFINPDDEPNKSISELVKEMTHGTG 268 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~-~~G~~~Vi~~~~~~~~~~~-~~~l----ga~~v~~~~~~~~~~~~~~~~~~~~~~g 268 (332)
+...+++|+|+|..+.+.+..+. ..+.++|.+.+++.+|.+. ++++ |.. +... ++..+.+ ..
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~-----~~~~~av------~~ 194 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA-----TDPRAAM------SG 194 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe-----CCHHHHh------cc
Confidence 45568999999999988877776 5787899999999888663 3333 432 2222 2233333 25
Q ss_pred ccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHh
Q 043260 269 VDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPA 313 (332)
Q Consensus 269 ~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~ 313 (332)
+|+|+.++++...+ --.+.++++ -.+..+|......-++++.-
T Consensus 195 aDiVvtaT~s~~p~-i~~~~l~~g-~~i~~vg~~~p~~rEld~~~ 237 (326)
T TIGR02992 195 ADIIVTTTPSETPI-LHAEWLEPG-QHVTAMGSDAEHKNEIDPAV 237 (326)
T ss_pred CCEEEEecCCCCcE-ecHHHcCCC-cEEEeeCCCCCCceecCHHH
Confidence 89999999875332 123468886 78888887654455666554
No 378
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.081 Score=47.14 Aligned_cols=79 Identities=18% Similarity=0.251 Sum_probs=50.7
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCCC--eee--CCCCCCCchHHHHHHHhcC-CCCc
Q 043260 197 GSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGMT--DFI--NPDDEPNKSISELVKEMTH-GTGV 269 (332)
Q Consensus 197 g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~--~v~--~~~~~~~~~~~~~~~~~~~-~~g~ 269 (332)
++++||+|+ |.+|...+..+...|. +|++++++.++.+.+ +++... +.+ |..+ .+++.+.+.+... -.++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 468999998 9999999998888998 899999988776533 333211 222 3222 2333333332211 1258
Q ss_pred cEEEEcCCC
Q 043260 270 DYGFECTGV 278 (332)
Q Consensus 270 d~vid~~g~ 278 (332)
|++|.+.|.
T Consensus 79 d~vi~~ag~ 87 (257)
T PRK07074 79 DVLVANAGA 87 (257)
T ss_pred CEEEECCCC
Confidence 999999874
No 379
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=95.52 E-value=0.49 Score=43.06 Aligned_cols=114 Identities=22% Similarity=0.276 Sum_probs=72.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHc----CC------CeEEEEcCC-----------cchHHHHHHcCCCeeeCCCCCCCc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQ----GA------AKIIGIDKN-----------PCRKDKGEAFGMTDFINPDDEPNK 254 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~----G~------~~Vi~~~~~-----------~~~~~~~~~lga~~v~~~~~~~~~ 254 (332)
...++++.|+|..|...+.++... |. ++++++|+. +.+..+++.... .. ..
T Consensus 24 ~d~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~-----~~---~~ 95 (279)
T cd05312 24 SDQRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEE-----KE---GK 95 (279)
T ss_pred hhcEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCc-----cc---CC
Confidence 457889999999998888777765 87 689999875 122333333211 11 14
Q ss_pred hHHHHHHHhcCCCCccEEEEcCCChHHH-HHHHHHhc---cCCcEEEEEcCCCCCcccCChHhHhc---CcEEEEe
Q 043260 255 SISELVKEMTHGTGVDYGFECTGVASLI-SEALEATK---LGKGKVMAIGAANEAKVPLNFPAIAL---GRNLKGT 323 (332)
Q Consensus 255 ~~~~~~~~~~~~~g~d~vid~~g~~~~~-~~~~~~l~---~~~G~~v~~G~~~~~~~~~~~~~~~~---~~~i~g~ 323 (332)
++.+.++.. ++|++|-+++.+..+ ++.++.|. +. =.+.-+.++. ...+..+.+.+. +..|..+
T Consensus 96 ~L~e~i~~v----~ptvlIG~S~~~g~ft~evv~~Ma~~~~~-PIIFaLSNPt-~~~E~~pe~a~~~t~G~ai~AT 165 (279)
T cd05312 96 SLLEVVKAV----KPTVLIGLSGVGGAFTEEVVRAMAKSNER-PIIFALSNPT-SKAECTAEDAYKWTDGRALFAS 165 (279)
T ss_pred CHHHHHHhc----CCCEEEEeCCCCCCCCHHHHHHHHhcCCC-CEEEECCCcC-CccccCHHHHHHhhcCCEEEEe
Confidence 566666543 689999988633233 57777776 44 4555666665 456777777665 5656654
No 380
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.1 Score=47.67 Aligned_cols=81 Identities=21% Similarity=0.214 Sum_probs=50.6
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCc---------chHH-HHH---HcCCCe-ee--CCCCCCCchHH
Q 043260 195 EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNP---------CRKD-KGE---AFGMTD-FI--NPDDEPNKSIS 257 (332)
Q Consensus 195 ~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~---------~~~~-~~~---~lga~~-v~--~~~~~~~~~~~ 257 (332)
-+++++||+|+ +++|.++++.+...|+ +|++++++. ++.+ .++ +.|... .+ |..+ .++..
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~v~ 80 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD--WDGAA 80 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC--HHHHH
Confidence 46789999998 9999999999888999 888887654 3332 222 234332 22 2222 23333
Q ss_pred HHHHHhcCC-CCccEEEEcCCC
Q 043260 258 ELVKEMTHG-TGVDYGFECTGV 278 (332)
Q Consensus 258 ~~~~~~~~~-~g~d~vid~~g~ 278 (332)
+.+.+.... ..+|++|++.|.
T Consensus 81 ~~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 81 NLVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHHhcCCCCEEEECCCC
Confidence 333332211 258999999874
No 381
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.49 E-value=0.092 Score=46.83 Aligned_cols=80 Identities=16% Similarity=0.157 Sum_probs=50.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcch-HH-H---HHHcCCCe-ee--CCCCCCCchHHHHHHHhcC-
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCR-KD-K---GEAFGMTD-FI--NPDDEPNKSISELVKEMTH- 265 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~-~~-~---~~~lga~~-v~--~~~~~~~~~~~~~~~~~~~- 265 (332)
+++++||+|+ +++|..+++.+...|+ +|++++++.++ .+ . +++.+... .+ |..+ .++..+.+.+...
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 83 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS--KADLRAAVARTEAE 83 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4778999998 9999999999999999 89998876542 22 2 22334321 22 2222 2334333333211
Q ss_pred CCCccEEEEcCCC
Q 043260 266 GTGVDYGFECTGV 278 (332)
Q Consensus 266 ~~g~d~vid~~g~ 278 (332)
-...|++|++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (254)
T PRK06114 84 LGALTLAVNAAGI 96 (254)
T ss_pred cCCCCEEEECCCC
Confidence 1258999999884
No 382
>PRK08328 hypothetical protein; Provisional
Probab=95.48 E-value=0.066 Score=47.54 Aligned_cols=36 Identities=33% Similarity=0.474 Sum_probs=31.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP 231 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~ 231 (332)
.+.+|+|+|+|++|..++..+..+|.++++++|.+.
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 456799999999999999999999999999998543
No 383
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.085 Score=47.59 Aligned_cols=79 Identities=19% Similarity=0.292 Sum_probs=50.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHc---C--CC-eee--CCCCCCCchHHHHHHHhcC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAF---G--MT-DFI--NPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~l---g--a~-~v~--~~~~~~~~~~~~~~~~~~~ 265 (332)
+++++||+|+ |.+|..+++.+...|. +|++++++.++.+.. +++ + .. .++ |..+ .++..+.+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD--EDQVARAVDAATA 82 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence 4688999998 9999999999999999 899999887665422 222 1 11 222 3322 2333333332211
Q ss_pred -CCCccEEEEcCC
Q 043260 266 -GTGVDYGFECTG 277 (332)
Q Consensus 266 -~~g~d~vid~~g 277 (332)
-.++|++|.+.|
T Consensus 83 ~~~~~d~li~~ag 95 (276)
T PRK05875 83 WHGRLHGVVHCAG 95 (276)
T ss_pred HcCCCCEEEECCC
Confidence 125899999887
No 384
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.46 E-value=0.097 Score=45.83 Aligned_cols=35 Identities=20% Similarity=0.317 Sum_probs=31.5
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCC
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKN 230 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~ 230 (332)
...+|+|+|+|++|..+++.+...|..+++++|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 44679999999999999999999999899999987
No 385
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.43 E-value=0.18 Score=44.61 Aligned_cols=105 Identities=16% Similarity=0.155 Sum_probs=61.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCC-cchHH----HHHHcCCCe-e--eCCCCCCCchHHHHHHHhcC-
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKN-PCRKD----KGEAFGMTD-F--INPDDEPNKSISELVKEMTH- 265 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~-~~~~~----~~~~lga~~-v--~~~~~~~~~~~~~~~~~~~~- 265 (332)
.+.++||+|+ |.+|..+++.+...|+ +|+.+.++ .++.+ .+++.+... . .|..+ ..+....+.+...
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST--REGCETLAKATIDR 81 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC--HHHHHHHHHHHHHH
Confidence 3578999998 9999999998888998 77665543 22222 223344331 2 23322 2223222222211
Q ss_pred CCCccEEEEcCCCh----------H---------------HHHHHHHHhccCCcEEEEEcCCCC
Q 043260 266 GTGVDYGFECTGVA----------S---------------LISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 266 ~~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
-.++|+||.++|.. + ..+.+.+.+++. |+++.+++...
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~~ 144 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVAG 144 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchhc
Confidence 12689999999831 0 133445566676 89999987654
No 386
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=95.43 E-value=0.18 Score=46.36 Aligned_cols=71 Identities=17% Similarity=0.175 Sum_probs=50.0
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCC
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTG 277 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g 277 (332)
.+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|...+ .+..+.+ ...|+||.++.
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~~~~e~~------~~~d~vi~~vp 67 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA--------STAKAVA------EQCDVIITMLP 67 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHH------hcCCEEEEeCC
Confidence 368999999999988888888898 89999999988887777664211 1222222 14688888877
Q ss_pred ChHHHH
Q 043260 278 VASLIS 283 (332)
Q Consensus 278 ~~~~~~ 283 (332)
....+.
T Consensus 68 ~~~~~~ 73 (296)
T PRK11559 68 NSPHVK 73 (296)
T ss_pred CHHHHH
Confidence 654433
No 387
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.42 E-value=0.29 Score=45.09 Aligned_cols=116 Identities=16% Similarity=0.202 Sum_probs=67.9
Q ss_pred CEEEEECCChHHHHHH-HHHHHcCCCeEE-EEcCCcc--hHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEE
Q 043260 198 SSVAVFGLGAVGLGVM-DRARIQGAAKII-GIDKNPC--RKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGF 273 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~-~la~~~G~~~Vi-~~~~~~~--~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vi 273 (332)
-++.|+|.|.+|...+ .+.+.-+. ++. +++.+++ .++.++++|..... .++.+.+.+ .+-..+|+||
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~-------~~ie~LL~~-~~~~dIDiVf 75 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA-------EGIDGLLAM-PEFDDIDIVF 75 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc-------CCHHHHHhC-cCCCCCCEEE
Confidence 5689999999998744 44443456 555 4555554 34567778754322 222222321 1113699999
Q ss_pred EcCCChHHHHHHHHHhccCCcEEEEEcCCCC---CcccCChHhHhc--CcEEEEe
Q 043260 274 ECTGVASLISEALEATKLGKGKVMAIGAANE---AKVPLNFPAIAL--GRNLKGT 323 (332)
Q Consensus 274 d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~---~~~~~~~~~~~~--~~~i~g~ 323 (332)
++++...+...+.+++..+ -+++....... --.++|...+.. +.+++..
T Consensus 76 ~AT~a~~H~e~a~~a~eaG-k~VID~sPA~~~PlvVP~VN~~~~~~~~~~~iia~ 129 (302)
T PRK08300 76 DATSAGAHVRHAAKLREAG-IRAIDLTPAAIGPYCVPAVNLDEHLDAPNVNMVTC 129 (302)
T ss_pred ECCCHHHHHHHHHHHHHcC-CeEEECCccccCCcccCcCCHHHHhcccCCCEEEC
Confidence 9999977777777777765 55555543332 234466665543 4555443
No 388
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.039 Score=49.68 Aligned_cols=78 Identities=21% Similarity=0.321 Sum_probs=50.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCe-eeCCCCCCCchHHHHHHHhcC-CCCccEE
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTD-FINPDDEPNKSISELVKEMTH-GTGVDYG 272 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~~~~~~~-~~g~d~v 272 (332)
.+++++|+|+ |.+|..+++.+...|+ +|++++++.++.+.. .+... ..|..+ .+++.+.+.+... -..+|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~l 77 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTD--DASVQAAVDEVIARAGRIDVL 77 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCC--HHHHHHHHHHHHHhCCCCCEE
Confidence 3568999998 9999999999988998 899999876554322 12221 123322 3444444433211 1258999
Q ss_pred EEcCCC
Q 043260 273 FECTGV 278 (332)
Q Consensus 273 id~~g~ 278 (332)
|++.|.
T Consensus 78 i~~ag~ 83 (270)
T PRK06179 78 VNNAGV 83 (270)
T ss_pred EECCCC
Confidence 999984
No 389
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.41 E-value=0.1 Score=46.51 Aligned_cols=82 Identities=20% Similarity=0.217 Sum_probs=49.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcch--HHHHHHcCCCe-eeCCCCCCCchHHHHHHHhcC-CCCcc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCR--KDKGEAFGMTD-FINPDDEPNKSISELVKEMTH-GTGVD 270 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~--~~~~~~lga~~-v~~~~~~~~~~~~~~~~~~~~-~~g~d 270 (332)
.|+++||+|+ |++|.++++.+...|+ +|+.++++... .+.+++++.+. .+..+-.+.++..+.+.+... -...|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999998 9999999999999999 88888765422 22334444321 121111122334333333211 12589
Q ss_pred EEEEcCCC
Q 043260 271 YGFECTGV 278 (332)
Q Consensus 271 ~vid~~g~ 278 (332)
++|+++|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999874
No 390
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.41 E-value=0.12 Score=46.47 Aligned_cols=93 Identities=18% Similarity=0.197 Sum_probs=61.5
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHc----CCC---eeeCCCCCCCchHHHHHHHhcCCC
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAF----GMT---DFINPDDEPNKSISELVKEMTHGT 267 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga~---~v~~~~~~~~~~~~~~~~~~~~~~ 267 (332)
.++.+||-+|+|. |..+..+++. |. +|+++|.+++.++.+++. |.. .++..+ .. .+....+ .
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d------~~-~l~~~~~-~ 111 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCA------AQ-DIAQHLE-T 111 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEcC------HH-HHhhhcC-C
Confidence 4567899899876 7777777774 76 999999999888776553 321 122211 11 1222222 3
Q ss_pred CccEEEEcCC-----C-hHHHHHHHHHhccCCcEEEEE
Q 043260 268 GVDYGFECTG-----V-ASLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 268 g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 299 (332)
.||+|+.... . ...+..+.+.|+|+ |.++++
T Consensus 112 ~fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 112 PVDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred CCCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 7999996432 2 24578999999998 998765
No 391
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.11 Score=46.00 Aligned_cols=78 Identities=17% Similarity=0.264 Sum_probs=50.4
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH----c--CCC-eee--CCCCCCCchHHHHHHHhcC-
Q 043260 197 GSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA----F--GMT-DFI--NPDDEPNKSISELVKEMTH- 265 (332)
Q Consensus 197 g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~----l--ga~-~v~--~~~~~~~~~~~~~~~~~~~- 265 (332)
++++||+|+ |++|...++.+...|. +|+++++++++.+.+.+ . +.. .++ |..+ .+++.+.+.+...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 568999998 9999998888888898 89999998877654321 1 221 222 3332 2334333333211
Q ss_pred CCCccEEEEcCC
Q 043260 266 GTGVDYGFECTG 277 (332)
Q Consensus 266 ~~g~d~vid~~g 277 (332)
-.+.|++|.+.|
T Consensus 79 ~~~id~vi~~ag 90 (248)
T PRK08251 79 LGGLDRVIVNAG 90 (248)
T ss_pred cCCCCEEEECCC
Confidence 125899999987
No 392
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=95.40 E-value=0.24 Score=42.13 Aligned_cols=98 Identities=17% Similarity=0.229 Sum_probs=64.0
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH----cCCCe--eeCCCCCCCchHHHHHHHh
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA----FGMTD--FINPDDEPNKSISELVKEM 263 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~~~~~ 263 (332)
....+.++++||=+|+|. |..+..+++.....+|+++|.+++..+.+++ .+... ++..+ ... .+
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d------~~~---~~ 94 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGE------API---EL 94 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecC------chh---hc
Confidence 445677899999999865 6666677776543489999999987766643 34322 22221 111 11
Q ss_pred cCCCCccEEEEcCCC---hHHHHHHHHHhccCCcEEEEEc
Q 043260 264 THGTGVDYGFECTGV---ASLISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 264 ~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G 300 (332)
. ..+|+|+..... ...+..+.+.|+++ |++++..
T Consensus 95 -~-~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~ 131 (187)
T PRK08287 95 -P-GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF 131 (187)
T ss_pred -C-cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence 1 269999975431 23667889999998 9988754
No 393
>PLN02256 arogenate dehydrogenase
Probab=95.38 E-value=0.3 Score=45.26 Aligned_cols=96 Identities=14% Similarity=0.233 Sum_probs=61.3
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCc
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGV 269 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~ 269 (332)
+...-..+.+|.|+|.|.+|...+..++..|. +|+++++++. .+.++++|... . .+..+.+ . ..+
T Consensus 29 ~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~-----~~~~e~~----~-~~a 93 (304)
T PLN02256 29 EELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---F-----RDPDDFC----E-EHP 93 (304)
T ss_pred HhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---e-----CCHHHHh----h-CCC
Confidence 44444566789999999999999998888887 8999988864 35566677532 1 1121111 1 146
Q ss_pred cEEEEcCCChHHHHHHHHH-----hccCCcEEEEEcCC
Q 043260 270 DYGFECTGVASLISEALEA-----TKLGKGKVMAIGAA 302 (332)
Q Consensus 270 d~vid~~g~~~~~~~~~~~-----l~~~~G~~v~~G~~ 302 (332)
|+||-|+... .+...++- ++++ ..++.+++.
T Consensus 94 DvVilavp~~-~~~~vl~~l~~~~l~~~-~iviDv~Sv 129 (304)
T PLN02256 94 DVVLLCTSIL-STEAVLRSLPLQRLKRS-TLFVDVLSV 129 (304)
T ss_pred CEEEEecCHH-HHHHHHHhhhhhccCCC-CEEEecCCc
Confidence 8888888764 33333332 3454 666777763
No 394
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.37 E-value=0.088 Score=46.95 Aligned_cols=79 Identities=15% Similarity=0.151 Sum_probs=49.6
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HH----cCCC--eee--CCCCCCCchHHHHHHHhcC-
Q 043260 197 GSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EA----FGMT--DFI--NPDDEPNKSISELVKEMTH- 265 (332)
Q Consensus 197 g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~----lga~--~v~--~~~~~~~~~~~~~~~~~~~- 265 (332)
++++||+|+ |.+|..++..+...|+ +|++++++..+.+.. .+ .+.. ..+ |..+ .++....+.+...
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 78 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS--EQSVLALSRGVDEI 78 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC--HHHHHHHHHHHHHH
Confidence 568999998 9999999999988998 899999887655432 12 2311 122 2222 2333333332211
Q ss_pred CCCccEEEEcCCC
Q 043260 266 GTGVDYGFECTGV 278 (332)
Q Consensus 266 ~~g~d~vid~~g~ 278 (332)
-...|++|++.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (259)
T PRK12384 79 FGRVDLLVYNAGI 91 (259)
T ss_pred cCCCCEEEECCCc
Confidence 0258999998873
No 395
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.078 Score=47.19 Aligned_cols=76 Identities=20% Similarity=0.271 Sum_probs=49.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCC-eee--CCCCCCCchHHHHHHHhcC-CCCcc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMT-DFI--NPDDEPNKSISELVKEMTH-GTGVD 270 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~-~v~--~~~~~~~~~~~~~~~~~~~-~~g~d 270 (332)
.++++||+|+ |++|..+++.+...|+ +|++++++.++ +..+.. ..+ |..+ .+++.+.+.+... -..+|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 77 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLD 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 5789999998 9999999999999999 89999887654 122221 122 3222 2333333332211 12589
Q ss_pred EEEEcCCC
Q 043260 271 YGFECTGV 278 (332)
Q Consensus 271 ~vid~~g~ 278 (332)
++|.+.|.
T Consensus 78 ~vi~~ag~ 85 (252)
T PRK07856 78 VLVNNAGG 85 (252)
T ss_pred EEEECCCC
Confidence 99999873
No 396
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.37 E-value=0.16 Score=46.69 Aligned_cols=94 Identities=14% Similarity=0.191 Sum_probs=65.8
Q ss_pred hcccchhhhHHHHHHhhCC-CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEc-CCcchHHHHHHcCCCeeeCCCCCC
Q 043260 176 FLSCGYSSGFGAAWKEFKV-EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGID-KNPCRKDKGEAFGMTDFINPDDEP 252 (332)
Q Consensus 176 ~l~~~~~ta~~al~~~~~~-~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~-~~~~~~~~~~~lga~~v~~~~~~~ 252 (332)
.+||+....+..+ +.-.+ -.|++|+|+|. +.+|.-++.++...|+ +|+++. ++.
T Consensus 137 ~~PcTp~ai~~ll-~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~--------------------- 193 (296)
T PRK14188 137 LVPCTPLGCMMLL-RRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR--------------------- 193 (296)
T ss_pred CcCCCHHHHHHHH-HHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence 3555544444433 44343 57999999995 9999999999999998 899884 322
Q ss_pred CchHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 253 NKSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 253 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
++ .+.+ +.+|+|+-++|.+..+...+ ++++ ..++.+|...
T Consensus 194 --~l----~e~~--~~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~ 233 (296)
T PRK14188 194 --DL----PAVC--RRADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR 233 (296)
T ss_pred --CH----HHHH--hcCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence 11 1111 14899999999987666554 8887 8999999754
No 397
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.36 E-value=0.1 Score=46.06 Aligned_cols=75 Identities=19% Similarity=0.253 Sum_probs=54.0
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH--HcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEc
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE--AFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFEC 275 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~--~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~ 275 (332)
++++|+|+|.+|...++.+...|. .|++++.++++.+... ++.. +++..+. .-.+.+++. +-..+|+++-+
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~----t~~~~L~~a-gi~~aD~vva~ 73 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDA----TDEDVLEEA-GIDDADAVVAA 73 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecC----CCHHHHHhc-CCCcCCEEEEe
Confidence 368899999999999999999998 9999999999877632 3544 3333322 112234443 34479999999
Q ss_pred CCCh
Q 043260 276 TGVA 279 (332)
Q Consensus 276 ~g~~ 279 (332)
+++.
T Consensus 74 t~~d 77 (225)
T COG0569 74 TGND 77 (225)
T ss_pred eCCC
Confidence 9984
No 398
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.36 E-value=0.14 Score=44.78 Aligned_cols=118 Identities=14% Similarity=0.130 Sum_probs=68.8
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCCCeeeC-------CCCCCCchHHHHHHHhcC
Q 043260 194 VEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGMTDFIN-------PDDEPNKSISELVKEMTH 265 (332)
Q Consensus 194 ~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v~~-------~~~~~~~~~~~~~~~~~~ 265 (332)
..++.+||+.|+|. |.-++.+|. .|. +|+++|.++.-.+.+ ++.+...... +......-....+.++..
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 35778999999977 777777775 799 999999999887764 3333211000 000000000001111110
Q ss_pred --CCCccEEEEcCCC--------hHHHHHHHHHhccCCcEEEEEcCCC------CCcccCChHhHh
Q 043260 266 --GTGVDYGFECTGV--------ASLISEALEATKLGKGKVMAIGAAN------EAKVPLNFPAIA 315 (332)
Q Consensus 266 --~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~G~~~------~~~~~~~~~~~~ 315 (332)
...||.|+|+..- ...+..+.+.|+|+ |++++++... +.+..++..++.
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~~~~~~~~~gpp~~~~~~eL~ 173 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITLDYDQSEMAGPPFSVSPAEVE 173 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEEEcCCCCCCCcCCCCCHHHHH
Confidence 1258999997541 23577999999998 9866664322 123346666654
No 399
>PRK07411 hypothetical protein; Validated
Probab=95.34 E-value=0.051 Score=52.14 Aligned_cols=35 Identities=23% Similarity=0.278 Sum_probs=31.5
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 043260 197 GSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP 231 (332)
Q Consensus 197 g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~ 231 (332)
..+|+|+|+|++|-.+++.+..+|.++++++|.+.
T Consensus 38 ~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D~ 72 (390)
T PRK07411 38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDV 72 (390)
T ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 46799999999999999999999999999998653
No 400
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.34 E-value=0.098 Score=48.39 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=30.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKN 230 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~ 230 (332)
.|+++||+|+ +++|.++++.+...|+ +|++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 4788999998 9999999999999999 89998886
No 401
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.33 E-value=0.1 Score=46.64 Aligned_cols=79 Identities=24% Similarity=0.227 Sum_probs=50.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHH----HHHcCCC-eee--CCCCCCCchHHHHHHHhcC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDK----GEAFGMT-DFI--NPDDEPNKSISELVKEMTH-G 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~----~~~lga~-~v~--~~~~~~~~~~~~~~~~~~~-~ 266 (332)
.++++||+|+ |++|...++.+...|+ +|++++++ ++.+. ..+.+.+ .++ |..+ .++..+.+.+... -
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK--PESAEKVVKEALEEF 89 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 5789999998 9999999999999999 89988877 33322 2233433 222 3322 2333333333211 1
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
..+|++|.+.|.
T Consensus 90 g~id~li~~ag~ 101 (258)
T PRK06935 90 GKIDILVNNAGT 101 (258)
T ss_pred CCCCEEEECCCC
Confidence 158999998874
No 402
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.33 E-value=0.096 Score=47.09 Aligned_cols=82 Identities=18% Similarity=0.267 Sum_probs=49.6
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHcCCCeEEEEcCC---cchHH-HHHHcCCCeeeCCCCCCCchHHHHHHHhcCC-C
Q 043260 196 KGSSVAVFGL---GAVGLGVMDRARIQGAAKIIGIDKN---PCRKD-KGEAFGMTDFINPDDEPNKSISELVKEMTHG-T 267 (332)
Q Consensus 196 ~g~~vlV~G~---g~vG~~~~~la~~~G~~~Vi~~~~~---~~~~~-~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~-~ 267 (332)
.++++||+|+ +++|.++++.+...|+ +|+++.+. +++++ +.++++....+..+-.+.++..+.+.+.... .
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 5788999984 6899999999888999 88887543 23333 2234453322222211234444444433211 2
Q ss_pred CccEEEEcCCC
Q 043260 268 GVDYGFECTGV 278 (332)
Q Consensus 268 g~d~vid~~g~ 278 (332)
.+|++|++.|.
T Consensus 84 ~iD~lvnnAG~ 94 (260)
T PRK06997 84 GLDGLVHSIGF 94 (260)
T ss_pred CCcEEEEcccc
Confidence 68999998864
No 403
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.33 E-value=0.095 Score=46.85 Aligned_cols=79 Identities=19% Similarity=0.285 Sum_probs=50.4
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe-ee--CCCCCCCchHHHHHHHhcC-CC
Q 043260 197 GSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD-FI--NPDDEPNKSISELVKEMTH-GT 267 (332)
Q Consensus 197 g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v~--~~~~~~~~~~~~~~~~~~~-~~ 267 (332)
+.++||+|+ |.+|..+++.+...|. +|+++++++++.+.+ +..+... ++ |..+ .+++.+.+.+... -.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD--AEACERLIEAAVARFG 77 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence 357999998 9999999999989998 999999987664432 2234322 22 2222 2333333333211 12
Q ss_pred CccEEEEcCCC
Q 043260 268 GVDYGFECTGV 278 (332)
Q Consensus 268 g~d~vid~~g~ 278 (332)
++|+||.++|.
T Consensus 78 ~id~vi~~ag~ 88 (263)
T PRK06181 78 GIDILVNNAGI 88 (263)
T ss_pred CCCEEEECCCc
Confidence 58999999874
No 404
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=95.31 E-value=0.15 Score=46.17 Aligned_cols=104 Identities=15% Similarity=0.127 Sum_probs=67.4
Q ss_pred HHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCC--CeeeCCCCCCCchHHHHHHHhcCC
Q 043260 189 WKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGM--TDFINPDDEPNKSISELVKEMTHG 266 (332)
Q Consensus 189 ~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~~~~~~~~ 266 (332)
....++.++.+||=+|+|. |..+..+++..++ +|+.++.+++-.+.+++.-. +.+. ... .++. ..-...
T Consensus 45 l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~-~~~---~D~~---~~~~~~ 115 (263)
T PTZ00098 45 LSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIE-FEA---NDIL---KKDFPE 115 (263)
T ss_pred HHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceE-EEE---CCcc---cCCCCC
Confidence 3556889999999999865 5556677777787 99999999888777766322 1111 000 1110 111123
Q ss_pred CCccEEEEcC-----C--C-hHHHHHHHHHhccCCcEEEEEcCC
Q 043260 267 TGVDYGFECT-----G--V-ASLISEALEATKLGKGKVMAIGAA 302 (332)
Q Consensus 267 ~g~d~vid~~-----g--~-~~~~~~~~~~l~~~~G~~v~~G~~ 302 (332)
..||+|+..- + . ...+..+.+.|+|+ |++++....
T Consensus 116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~~ 158 (263)
T PTZ00098 116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDYC 158 (263)
T ss_pred CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence 3699999631 1 1 24578889999998 999987543
No 405
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.31 E-value=0.083 Score=47.13 Aligned_cols=80 Identities=21% Similarity=0.328 Sum_probs=52.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCCC-eee--CCCCCCCchHHHHHHHhcC-CCCc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGMT-DFI--NPDDEPNKSISELVKEMTH-GTGV 269 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~-~v~--~~~~~~~~~~~~~~~~~~~-~~g~ 269 (332)
.++++||+|+ |.+|..+++.+...|. +|++++++.++.+.+ .+++.. ..+ |..+ .++..+.+.+... -...
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR--QDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 4678999998 9999999999999999 899999988876544 334322 122 2222 2333333333211 1258
Q ss_pred cEEEEcCCC
Q 043260 270 DYGFECTGV 278 (332)
Q Consensus 270 d~vid~~g~ 278 (332)
|++|.+.+.
T Consensus 82 d~li~~ag~ 90 (257)
T PRK07067 82 DILFNNAAL 90 (257)
T ss_pred CEEEECCCc
Confidence 999998763
No 406
>PLN02244 tocopherol O-methyltransferase
Probab=95.31 E-value=0.056 Score=50.90 Aligned_cols=95 Identities=19% Similarity=0.299 Sum_probs=63.7
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH----cCCC---eeeCCCCCCCchHHHHHHHhcCCC
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA----FGMT---DFINPDDEPNKSISELVKEMTHGT 267 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~~~~~~~~~ 267 (332)
+++++||=+|+|. |..+..+++..|+ +|+++|.++...+.+++ .|.. .++..+. .+ + .. ...
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~----~-~~-~~~ 185 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LN----Q-PF-EDG 185 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---cc----C-CC-CCC
Confidence 7889999999876 6677788887788 99999999987765544 2332 1221111 11 0 11 223
Q ss_pred CccEEEEcCCC------hHHHHHHHHHhccCCcEEEEEcC
Q 043260 268 GVDYGFECTGV------ASLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 268 g~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
.||+|+..... ...+.++.+.|+++ |++++...
T Consensus 186 ~FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 186 QFDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred CccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 69999874332 23678899999998 99988653
No 407
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.30 E-value=0.26 Score=45.11 Aligned_cols=88 Identities=18% Similarity=0.350 Sum_probs=57.5
Q ss_pred EEEEECCChHHHHH-HHHHHHcCCCeEEE-EcCCcch--HHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEE
Q 043260 199 SVAVFGLGAVGLGV-MDRARIQGAAKIIG-IDKNPCR--KDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFE 274 (332)
Q Consensus 199 ~vlV~G~g~vG~~~-~~la~~~G~~~Vi~-~~~~~~~--~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid 274 (332)
++.|+|+|.+|... ..+.+..++ ++.. ++.++++ ++.++++|...... ++...+. ...+|+|++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll~----~~dIDaV~i 70 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLLA----NPDIDIVFD 70 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHhc----CCCCCEEEE
Confidence 68899999999865 455554466 5554 5555554 45678888654432 2222222 236999999
Q ss_pred cCCChHHHHHHHHHhccCCcEEEEE
Q 043260 275 CTGVASLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 275 ~~g~~~~~~~~~~~l~~~~G~~v~~ 299 (332)
++++..+...+.+++..+ -.++..
T Consensus 71 aTp~~~H~e~a~~al~aG-k~VIde 94 (285)
T TIGR03215 71 ATSAKAHARHARLLAELG-KIVIDL 94 (285)
T ss_pred CCCcHHHHHHHHHHHHcC-CEEEEC
Confidence 999987878888887765 444433
No 408
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.30 E-value=0.29 Score=42.97 Aligned_cols=106 Identities=15% Similarity=0.188 Sum_probs=70.6
Q ss_pred hhCCCCCCEEEEECCChHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHH----cCCCeeeCCCCCCCchHHHHHHHhcC
Q 043260 191 EFKVEKGSSVAVFGLGAVGLGVMDRARIQG-AAKIIGIDKNPCRKDKGEA----FGMTDFINPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 191 ~~~~~~g~~vlV~G~g~vG~~~~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~~~~~~~ 265 (332)
.++....+++|=+|.+. |..++.+|..+. -.+++.+++++++.+.+++ .|.+..+.... ..+..+.+.+...
T Consensus 54 L~~~~~~k~iLEiGT~~-GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~--~gdal~~l~~~~~ 130 (219)
T COG4122 54 LARLSGPKRILEIGTAI-GYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL--GGDALDVLSRLLD 130 (219)
T ss_pred HHHhcCCceEEEeeccc-CHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe--cCcHHHHHHhccC
Confidence 45566778888888744 777888888776 4589999999999887654 57654221111 0133444444222
Q ss_pred CCCccEEEEcCC---ChHHHHHHHHHhccCCcEEEEEcC
Q 043260 266 GTGVDYGFECTG---VASLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 266 ~~g~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
+ .||+||--.. -+..++.+++.|+++ |.++.=-.
T Consensus 131 ~-~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNv 167 (219)
T COG4122 131 G-SFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNV 167 (219)
T ss_pred C-CccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeec
Confidence 3 7999986443 245789999999998 88775443
No 409
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=95.30 E-value=0.062 Score=51.19 Aligned_cols=35 Identities=29% Similarity=0.433 Sum_probs=31.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCC
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKN 230 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~ 230 (332)
...+|+|+|+|++|..++..+...|..+++++|.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45679999999999999999999999999999976
No 410
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.28 E-value=0.066 Score=47.28 Aligned_cols=82 Identities=20% Similarity=0.157 Sum_probs=50.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHH----HHHcCCC-eeeCCCCCCCchHHHHHHHhcC-CCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDK----GEAFGMT-DFINPDDEPNKSISELVKEMTH-GTG 268 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~----~~~lga~-~v~~~~~~~~~~~~~~~~~~~~-~~g 268 (332)
.++++||+|+ |.+|..++..+...|. +|++++++.++.+. +++.+.. .++..+-.+.+++.+.+.+... -..
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999998 9999999998888998 89999998665432 2233332 1221111112333333332211 115
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
+|.||.+.+.
T Consensus 84 ~d~vi~~ag~ 93 (251)
T PRK12826 84 LDILVANAGI 93 (251)
T ss_pred CCEEEECCCC
Confidence 8999998864
No 411
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.25 E-value=0.67 Score=34.56 Aligned_cols=85 Identities=16% Similarity=0.270 Sum_probs=54.9
Q ss_pred EEEEECCChHHHHHHHHHHHcC---CCeEEEE-cCCcchHHHH-HHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEE
Q 043260 199 SVAVFGLGAVGLGVMDRARIQG---AAKIIGI-DKNPCRKDKG-EAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGF 273 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~G---~~~Vi~~-~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vi 273 (332)
++.|+|+|.+|.+.+.-+...| . +|+++ ++++++.+.+ ++++..... .+..+.++ ..|+||
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~------~advvi 66 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA-------DDNEEAAQ------EADVVI 66 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES-------EEHHHHHH------HTSEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc-------CChHHhhc------cCCEEE
Confidence 5778899999999999999888 6 88855 9999888755 566643332 12333332 379999
Q ss_pred EcCCChHHHHHHHH---HhccCCcEEEEE
Q 043260 274 ECTGVASLISEALE---ATKLGKGKVMAI 299 (332)
Q Consensus 274 d~~g~~~~~~~~~~---~l~~~~G~~v~~ 299 (332)
-|+.-. .+...++ ...++ ..++.+
T Consensus 67 lav~p~-~~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 67 LAVKPQ-QLPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp E-S-GG-GHHHHHHHHHHHHTT-SEEEEE
T ss_pred EEECHH-HHHHHHHHHhhccCC-CEEEEe
Confidence 999875 3333333 34444 555554
No 412
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=95.25 E-value=0.18 Score=46.77 Aligned_cols=89 Identities=20% Similarity=0.180 Sum_probs=62.0
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEE
Q 043260 194 VEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGF 273 (332)
Q Consensus 194 ~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vi 273 (332)
.-.|++|.|+|-|.+|.+.++.++.+|. +|++.++.....+.+++.|+. +. ++.+.+ ...|+|+
T Consensus 13 ~LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~--------sl~Eaa------k~ADVV~ 76 (335)
T PRK13403 13 LLQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM--------SVSEAV------RTAQVVQ 76 (335)
T ss_pred hhCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC--------CHHHHH------hcCCEEE
Confidence 3478999999999999999999999999 898887665555666777762 21 122222 1479999
Q ss_pred EcCCChHH---H-HHHHHHhccCCcEEEEE
Q 043260 274 ECTGVASL---I-SEALEATKLGKGKVMAI 299 (332)
Q Consensus 274 d~~g~~~~---~-~~~~~~l~~~~G~~v~~ 299 (332)
-++.++.. + ...+..++++ ..+++.
T Consensus 77 llLPd~~t~~V~~~eil~~MK~G-aiL~f~ 105 (335)
T PRK13403 77 MLLPDEQQAHVYKAEVEENLREG-QMLLFS 105 (335)
T ss_pred EeCCChHHHHHHHHHHHhcCCCC-CEEEEC
Confidence 99886432 3 3456677775 544443
No 413
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=95.24 E-value=0.3 Score=40.62 Aligned_cols=87 Identities=24% Similarity=0.239 Sum_probs=57.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcc-hHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEE
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPC-RKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFE 274 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid 274 (332)
++++|.|+|-|.-|++.++-++..|. +|++..+... ..+.+++.|.. + .+..++++ ..|+|+-
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~-v--------~~~~eAv~------~aDvV~~ 66 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFE-V--------MSVAEAVK------KADVVML 66 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-E-C--------CEHHHHHH------C-SEEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCe-e--------ccHHHHHh------hCCEEEE
Confidence 57899999999999999999999999 8988877776 77889998873 2 33444443 4799999
Q ss_pred cCCCh---HHH-HHHHHHhccCCcEEEEE
Q 043260 275 CTGVA---SLI-SEALEATKLGKGKVMAI 299 (332)
Q Consensus 275 ~~g~~---~~~-~~~~~~l~~~~G~~v~~ 299 (332)
.+.+. +.+ ++....|+++ -++++.
T Consensus 67 L~PD~~q~~vy~~~I~p~l~~G-~~L~fa 94 (165)
T PF07991_consen 67 LLPDEVQPEVYEEEIAPNLKPG-ATLVFA 94 (165)
T ss_dssp -S-HHHHHHHHHHHHHHHS-TT--EEEES
T ss_pred eCChHHHHHHHHHHHHhhCCCC-CEEEeC
Confidence 99874 233 3445577775 444443
No 414
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.073 Score=47.61 Aligned_cols=80 Identities=20% Similarity=0.278 Sum_probs=50.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH---cCCCe-e--eCCCCCCCchHHHHHHHhcC-CC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA---FGMTD-F--INPDDEPNKSISELVKEMTH-GT 267 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~---lga~~-v--~~~~~~~~~~~~~~~~~~~~-~~ 267 (332)
++++++|+|+ |.+|..+++.+...|+ +|++++++++..+..++ .+... . .|..+ ..+..+.+.+... -.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD--PASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 4688999998 9999999999999999 89999988754443332 23321 2 22322 2223222222211 12
Q ss_pred CccEEEEcCCC
Q 043260 268 GVDYGFECTGV 278 (332)
Q Consensus 268 g~d~vid~~g~ 278 (332)
..|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (263)
T PRK08226 82 RIDILVNNAGV 92 (263)
T ss_pred CCCEEEECCCc
Confidence 58999998883
No 415
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.24 E-value=0.22 Score=46.48 Aligned_cols=95 Identities=18% Similarity=0.138 Sum_probs=64.1
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCee------eCCCCCCCchHHHHHHHhcCCCCccE
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDF------INPDDEPNKSISELVKEMTHGTGVDY 271 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v------~~~~~~~~~~~~~~~~~~~~~~g~d~ 271 (332)
.+|.|+|+|.+|.+.+..+...|. +|.+.++++++.+.+.+.+.... +...-....+..+.+ ..+|+
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~------~~aD~ 77 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL------AGADF 77 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH------cCCCE
Confidence 579999999999999999988998 89999998888776665421100 000000001222222 25899
Q ss_pred EEEcCCChHHHHHHHHHhccCCcEEEEEcC
Q 043260 272 GFECTGVASLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 272 vid~~g~~~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
||-++.+. .+..+++.++++ -.++.+..
T Consensus 78 Vi~~v~~~-~~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 78 AVVAVPSK-ALRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EEEECchH-HHHHHHHhcCcC-CEEEEEee
Confidence 99999996 567888888876 66666644
No 416
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=95.24 E-value=0.24 Score=42.79 Aligned_cols=34 Identities=24% Similarity=0.437 Sum_probs=30.5
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCC
Q 043260 197 GSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKN 230 (332)
Q Consensus 197 g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~ 230 (332)
..+|+|+|+|++|...+..+...|.++++++|.+
T Consensus 19 ~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 19 SAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred hCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4779999999999999999999999899999854
No 417
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=95.23 E-value=0.31 Score=42.20 Aligned_cols=99 Identities=16% Similarity=0.168 Sum_probs=65.9
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH----cCCCe--eeCCCCCCCchHHHHHHHhcCCCCc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA----FGMTD--FINPDDEPNKSISELVKEMTHGTGV 269 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~~~~~~~~~g~ 269 (332)
++++||-+|+|. |..+..+++.....+|+.+|.+++..+.+++ .+... ++. .+..+.+........+
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~------~d~~~~l~~~~~~~~~ 112 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC------GDAVEVLLDMFPDGSL 112 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe------cCHHHHHHHHcCcccc
Confidence 678899999977 7777788877644489999999988876643 23322 222 2221233322333368
Q ss_pred cEEEEcCCC--------------hHHHHHHHHHhccCCcEEEEEcCC
Q 043260 270 DYGFECTGV--------------ASLISEALEATKLGKGKVMAIGAA 302 (332)
Q Consensus 270 d~vid~~g~--------------~~~~~~~~~~l~~~~G~~v~~G~~ 302 (332)
|.|+-.... ...+..+.+.|+++ |.+++.-..
T Consensus 113 D~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~~~ 158 (202)
T PRK00121 113 DRIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFATDW 158 (202)
T ss_pred ceEEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEcCC
Confidence 999865432 34688999999998 999887543
No 418
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.23 E-value=0.18 Score=46.38 Aligned_cols=95 Identities=17% Similarity=0.189 Sum_probs=67.0
Q ss_pred hcccchhhhHHHHHHhhCC-CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCC
Q 043260 176 FLSCGYSSGFGAAWKEFKV-EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPN 253 (332)
Q Consensus 176 ~l~~~~~ta~~al~~~~~~-~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 253 (332)
.+||+....+. +.+..++ -.|++|+|+|. +.+|.-.+.++...|+ +|+++.+...
T Consensus 138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~--------------------- 194 (301)
T PRK14194 138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST--------------------- 194 (301)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence 34555444444 3344444 47999999999 5999999999999999 9999854422
Q ss_pred chHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 254 KSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 254 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
+..+.+ +.+|+||-++|.+..+...+ ++++ ..++.+|...
T Consensus 195 -~l~e~~------~~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin~ 234 (301)
T PRK14194 195 -DAKALC------RQADIVVAAVGRPRLIDADW--LKPG-AVVIDVGINR 234 (301)
T ss_pred -CHHHHH------hcCCEEEEecCChhcccHhh--ccCC-cEEEEecccc
Confidence 122222 24899999999986666554 8887 8999999553
No 419
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=95.23 E-value=0.26 Score=45.65 Aligned_cols=38 Identities=16% Similarity=0.193 Sum_probs=31.1
Q ss_pred CCCCEEEEECC---ChHHHHHHHHHHHcCCCeEEEEcCCcchH
Q 043260 195 EKGSSVAVFGL---GAVGLGVMDRARIQGAAKIIGIDKNPCRK 234 (332)
Q Consensus 195 ~~g~~vlV~G~---g~vG~~~~~la~~~G~~~Vi~~~~~~~~~ 234 (332)
-.|+++||+|+ .++|.++++.+...|+ +|++ .++..++
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~l 47 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPAL 47 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcchh
Confidence 35889999988 8999999999999999 8888 4454444
No 420
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.23 E-value=0.12 Score=45.99 Aligned_cols=80 Identities=14% Similarity=0.168 Sum_probs=49.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCc-chHHHHHHcCCCee-eCCCCCCCchHHHHHHHhcC-CCCccE
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNP-CRKDKGEAFGMTDF-INPDDEPNKSISELVKEMTH-GTGVDY 271 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~-~~~~~~~~lga~~v-~~~~~~~~~~~~~~~~~~~~-~~g~d~ 271 (332)
.+++++|+|+ |++|..+++.+...|+ +|+++.++. +..+.+++.+...+ .|..+ .++..+.+.+... -.+.|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4688999998 9999999999999998 787765443 33344443333222 23332 2333333333211 125899
Q ss_pred EEEcCCC
Q 043260 272 GFECTGV 278 (332)
Q Consensus 272 vid~~g~ 278 (332)
+|.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 421
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.22 E-value=0.13 Score=46.34 Aligned_cols=78 Identities=17% Similarity=0.249 Sum_probs=51.2
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH-cCCC-ee--eCCCCCCCchHHHHHHHhc-CCCCccE
Q 043260 198 SSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA-FGMT-DF--INPDDEPNKSISELVKEMT-HGTGVDY 271 (332)
Q Consensus 198 ~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~-~v--~~~~~~~~~~~~~~~~~~~-~~~g~d~ 271 (332)
+++||+|+ |.+|..+++.+...|. +|+++.+++++.+.+++ .+.. .+ .|..+ .+++.+.+.+.. ...++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 57999998 9999999998888998 89999998877665543 3322 11 23322 233333333321 1125899
Q ss_pred EEEcCCC
Q 043260 272 GFECTGV 278 (332)
Q Consensus 272 vid~~g~ 278 (332)
||.++|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9999874
No 422
>PRK08291 ectoine utilization protein EutC; Validated
Probab=95.22 E-value=0.34 Score=45.41 Aligned_cols=105 Identities=19% Similarity=0.216 Sum_probs=68.3
Q ss_pred CCCCEEEEECCChHHHHHHHHHHH-cCCCeEEEEcCCcchHHHH-HHc----CCCeeeCCCCCCCchHHHHHHHhcCCCC
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARI-QGAAKIIGIDKNPCRKDKG-EAF----GMTDFINPDDEPNKSISELVKEMTHGTG 268 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~-~G~~~Vi~~~~~~~~~~~~-~~l----ga~~v~~~~~~~~~~~~~~~~~~~~~~g 268 (332)
+...+++|+|+|..|.+.+..+.. .+.++|.+.+++.++.+.+ +++ |.. +... +++.+.+ ..
T Consensus 130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~-----~d~~~al------~~ 197 (330)
T PRK08291 130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVA-----RDVHEAV------AG 197 (330)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEe-----CCHHHHH------cc
Confidence 345689999999999987776664 5777999999998887644 333 432 2212 2233333 14
Q ss_pred ccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCCCCcccCChHh
Q 043260 269 VDYGFECTGVASLISEALEATKLGKGKVMAIGAANEAKVPLNFPA 313 (332)
Q Consensus 269 ~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~ 313 (332)
+|+|+.++++...+-. .+.++++ -++..+|......-++++.-
T Consensus 198 aDiVi~aT~s~~p~i~-~~~l~~g-~~v~~vg~d~~~~rEld~~~ 240 (330)
T PRK08291 198 ADIIVTTTPSEEPILK-AEWLHPG-LHVTAMGSDAEHKNEIAPAV 240 (330)
T ss_pred CCEEEEeeCCCCcEec-HHHcCCC-ceEEeeCCCCCCcccCCHHH
Confidence 7999999887543322 2457876 78888887654455565543
No 423
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.21 E-value=0.13 Score=45.77 Aligned_cols=80 Identities=15% Similarity=0.229 Sum_probs=52.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCC-eee--CCCCCCCchHHHHHHHhcC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMT-DFI--NPDDEPNKSISELVKEMTH-G 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~v~--~~~~~~~~~~~~~~~~~~~-~ 266 (332)
++++++|+|+ |.+|..++..+...|+ +|+++++++++.+.+ ++.+.. ..+ |..+ ..++...+.+... -
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAEH 86 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5789999998 9999999998888999 999999987665432 233432 122 3322 2333333333211 1
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
..+|.+|.+.|.
T Consensus 87 ~~id~vi~~ag~ 98 (256)
T PRK06124 87 GRLDILVNNVGA 98 (256)
T ss_pred CCCCEEEECCCC
Confidence 258999998884
No 424
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.12 Score=46.64 Aligned_cols=78 Identities=17% Similarity=0.178 Sum_probs=50.2
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH----HcCC--C-eee--CCCCCCCchHHHHHHHhcC-
Q 043260 197 GSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE----AFGM--T-DFI--NPDDEPNKSISELVKEMTH- 265 (332)
Q Consensus 197 g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga--~-~v~--~~~~~~~~~~~~~~~~~~~- 265 (332)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+... ..+. . .++ |..+ .+++.+ +.+...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~ 78 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE 78 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence 567999998 9999999999888999 8999988877654332 2222 1 222 3332 233333 333211
Q ss_pred CCCccEEEEcCCC
Q 043260 266 GTGVDYGFECTGV 278 (332)
Q Consensus 266 ~~g~d~vid~~g~ 278 (332)
-.++|+|+.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 1258999999874
No 425
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.18 E-value=0.16 Score=48.14 Aligned_cols=36 Identities=28% Similarity=0.318 Sum_probs=32.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP 231 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~ 231 (332)
...+|+|+|+|++|..+++.+..+|.++++++|.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 447899999999999999999999999999998764
No 426
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.17 E-value=0.15 Score=46.83 Aligned_cols=38 Identities=18% Similarity=0.359 Sum_probs=34.3
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHH
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDK 236 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~ 236 (332)
.+|.|+|+|.+|...++.+...|. +|++.++++++++.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATA 43 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence 479999999999999999888999 99999999988765
No 427
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=95.15 E-value=0.082 Score=50.78 Aligned_cols=36 Identities=19% Similarity=0.247 Sum_probs=31.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP 231 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~ 231 (332)
...+|+|+|+|++|..++..+..+|.+++.++|.+.
T Consensus 41 ~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D~ 76 (392)
T PRK07878 41 KNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFDV 76 (392)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCCE
Confidence 446799999999999999999999999999998643
No 428
>PRK04266 fibrillarin; Provisional
Probab=95.13 E-value=0.31 Score=43.11 Aligned_cols=101 Identities=21% Similarity=0.175 Sum_probs=62.6
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH----cCCCeeeCCCCCCCchHHHHHHHhcC
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA----FGMTDFINPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~~~~~~~ 265 (332)
+...+++|++||=+|+|. |..+..+++..+..+|++++.+++.++.+.+ ...-..+..+. .+. .....+.
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~---~~~-~~~~~l~- 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA---RKP-ERYAHVV- 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC---CCc-chhhhcc-
Confidence 346889999999998865 5556666776653489999999977664422 21112222221 110 0001111
Q ss_pred CCCccEEEEcCCChH----HHHHHHHHhccCCcEEEE
Q 043260 266 GTGVDYGFECTGVAS----LISEALEATKLGKGKVMA 298 (332)
Q Consensus 266 ~~g~d~vid~~g~~~----~~~~~~~~l~~~~G~~v~ 298 (332)
. .+|+|+.....+. .+..+.+.|+++ |++++
T Consensus 140 ~-~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI 174 (226)
T PRK04266 140 E-KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLL 174 (226)
T ss_pred c-cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEE
Confidence 2 4999996555432 367888899998 99988
No 429
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.13 E-value=0.16 Score=44.95 Aligned_cols=85 Identities=16% Similarity=0.167 Sum_probs=53.0
Q ss_pred CCCCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe--ee--CCCCCCCchHHHHHHHh
Q 043260 193 KVEKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD--FI--NPDDEPNKSISELVKEM 263 (332)
Q Consensus 193 ~~~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~--v~--~~~~~~~~~~~~~~~~~ 263 (332)
+..++++++|+|+ |.+|...++.+...|+ +|++++++.++.+.+ ++.+... ++ +.......++.+.+..+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3457889999998 9999999998888998 999999987665332 3333321 22 22210113333333222
Q ss_pred cC-CCCccEEEEcCCC
Q 043260 264 TH-GTGVDYGFECTGV 278 (332)
Q Consensus 264 ~~-~~g~d~vid~~g~ 278 (332)
.. ...+|.||.+++.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 11 1258999998764
No 430
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=95.13 E-value=0.24 Score=45.74 Aligned_cols=89 Identities=16% Similarity=0.256 Sum_probs=56.7
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCCC
Q 043260 199 SVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTGV 278 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g~ 278 (332)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|.... .+..+....+ ...|+||-++..
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~~~~--------~s~~~~~~~~---~~~dvIi~~vp~ 69 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRTTGV--------ANLRELSQRL---SAPRVVWVMVPH 69 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCccc--------CCHHHHHhhc---CCCCEEEEEcCc
Confidence 58899999999988888888898 99999999999888877664322 1111111111 146777777776
Q ss_pred hHHHHH----HHHHhccCCcEEEEEcC
Q 043260 279 ASLISE----ALEATKLGKGKVMAIGA 301 (332)
Q Consensus 279 ~~~~~~----~~~~l~~~~G~~v~~G~ 301 (332)
. .+.. ....+.++ -.++..+.
T Consensus 70 ~-~~~~v~~~l~~~l~~g-~ivid~st 94 (298)
T TIGR00872 70 G-IVDAVLEELAPTLEKG-DIVIDGGN 94 (298)
T ss_pred h-HHHHHHHHHHhhCCCC-CEEEECCC
Confidence 4 3333 33334443 44555443
No 431
>PRK14982 acyl-ACP reductase; Provisional
Probab=95.10 E-value=0.12 Score=48.51 Aligned_cols=95 Identities=18% Similarity=0.165 Sum_probs=64.5
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHH-cCCCeEEEEcCCcchHHHH-HHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccE
Q 043260 195 EKGSSVAVFGL-GAVGLGVMDRARI-QGAAKIIGIDKNPCRKDKG-EAFGMTDFINPDDEPNKSISELVKEMTHGTGVDY 271 (332)
Q Consensus 195 ~~g~~vlV~G~-g~vG~~~~~la~~-~G~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~ 271 (332)
-.+++|+|+|+ |.+|..+++.+.. .|.++++++.++.++.+.+ ++++...+ .+ +.+... .+|+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i--------~~----l~~~l~--~aDi 218 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI--------LS----LEEALP--EADI 218 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH--------Hh----HHHHHc--cCCE
Confidence 46789999999 9999998888864 5767999999988777654 34431111 11 222222 4899
Q ss_pred EEEcCCChHHHHHHHHHhccCCcEEEEEcCCCC
Q 043260 272 GFECTGVASLISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 272 vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
|+.+++.+..+..-.+.+++. -.++.++.+.+
T Consensus 219 Vv~~ts~~~~~~I~~~~l~~~-~~viDiAvPRD 250 (340)
T PRK14982 219 VVWVASMPKGVEIDPETLKKP-CLMIDGGYPKN 250 (340)
T ss_pred EEECCcCCcCCcCCHHHhCCC-eEEEEecCCCC
Confidence 999998754432222455776 78889998876
No 432
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.09 E-value=0.17 Score=44.70 Aligned_cols=76 Identities=13% Similarity=0.164 Sum_probs=49.2
Q ss_pred CEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HH---cCCC--eee--CCCCCCCchHHHHHHHhcCCCC
Q 043260 198 SSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EA---FGMT--DFI--NPDDEPNKSISELVKEMTHGTG 268 (332)
Q Consensus 198 ~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~---lga~--~v~--~~~~~~~~~~~~~~~~~~~~~g 268 (332)
++++|+|+ |++|...++.+...|. +|+++++++++.+.. ++ .+.. .++ |..+ ..+..+.+.+.. . .
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~-~-~ 76 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILD--TASHAAFLDSLP-A-L 76 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC--hHHHHHHHHHHh-h-c
Confidence 47899998 9999999999999998 899999988766432 22 1211 222 2222 233333333332 2 4
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
+|+++.++|.
T Consensus 77 ~d~vv~~ag~ 86 (243)
T PRK07102 77 PDIVLIAVGT 86 (243)
T ss_pred CCEEEECCcC
Confidence 7999998774
No 433
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.082 Score=47.85 Aligned_cols=80 Identities=21% Similarity=0.223 Sum_probs=49.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcch-------HH-H---HHHcCCCe-e--eCCCCCCCchHHHHH
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCR-------KD-K---GEAFGMTD-F--INPDDEPNKSISELV 260 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~-------~~-~---~~~lga~~-v--~~~~~~~~~~~~~~~ 260 (332)
.++++||+|+ |++|..+++.+...|+ +|++++++.++ ++ . +++.+... + .|..+ .+++.+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~ 81 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD--EDQVAAAV 81 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHH
Confidence 4678999998 9999999999988999 89999886542 11 1 22334332 2 23332 23333333
Q ss_pred HHhcC-CCCccEEEEcCCC
Q 043260 261 KEMTH-GTGVDYGFECTGV 278 (332)
Q Consensus 261 ~~~~~-~~g~d~vid~~g~ 278 (332)
.+... -..+|++|+++|.
T Consensus 82 ~~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 82 AKAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHHhCCCCEEEECCCC
Confidence 32211 1158999999874
No 434
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.08 E-value=0.11 Score=49.99 Aligned_cols=74 Identities=23% Similarity=0.365 Sum_probs=48.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCCC-eee--CCCCCCCchHHHHHHHhcCCCCcc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGMT-DFI--NPDDEPNKSISELVKEMTHGTGVD 270 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~-~v~--~~~~~~~~~~~~~~~~~~~~~g~d 270 (332)
++++++|+|+ |++|.+.++.+...|. +|+++++++++.+.. ...+.. ..+ |..+ . +.+.+..+ ++|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd---~---~~v~~~l~--~ID 247 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ---E---AALAELLE--KVD 247 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC---H---HHHHHHhC--CCC
Confidence 4789999998 9999999998888998 999998877665422 111111 122 3222 1 22333332 599
Q ss_pred EEEEcCCC
Q 043260 271 YGFECTGV 278 (332)
Q Consensus 271 ~vid~~g~ 278 (332)
++|++.|.
T Consensus 248 iLInnAGi 255 (406)
T PRK07424 248 ILIINHGI 255 (406)
T ss_pred EEEECCCc
Confidence 99998774
No 435
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.06 E-value=0.22 Score=45.45 Aligned_cols=95 Identities=22% Similarity=0.229 Sum_probs=65.6
Q ss_pred hcccchhhhHHHHHHhhCC-CCCCEEEEECCC-hHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCC
Q 043260 176 FLSCGYSSGFGAAWKEFKV-EKGSSVAVFGLG-AVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPN 253 (332)
Q Consensus 176 ~l~~~~~ta~~al~~~~~~-~~g~~vlV~G~g-~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 253 (332)
.+||+....+. +.+..++ -.|++|+|+|.| .+|.-++.++...|+ +|.++....
T Consensus 136 ~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~t---------------------- 191 (285)
T PRK14191 136 FVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHILT---------------------- 191 (285)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCCc----------------------
Confidence 45555544444 3344454 369999999985 999999999999998 888763221
Q ss_pred chHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 254 KSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 254 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
.++.+.+ +.+|+|+-++|.+..+. -++++++ ..++.+|...
T Consensus 192 ~~l~~~~------~~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~~ 232 (285)
T PRK14191 192 KDLSFYT------QNADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGINR 232 (285)
T ss_pred HHHHHHH------HhCCEEEEecCCCCcCC--HHHcCCC-cEEEEeeccc
Confidence 2222222 24899999999875543 4567887 9999999743
No 436
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.05 E-value=0.28 Score=40.00 Aligned_cols=94 Identities=19% Similarity=0.126 Sum_probs=63.5
Q ss_pred cccchhhhHHHHHHhhCC-CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCc
Q 043260 177 LSCGYSSGFGAAWKEFKV-EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNK 254 (332)
Q Consensus 177 l~~~~~ta~~al~~~~~~-~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~ 254 (332)
+++.....+..+ +..++ -.|++|+|+|. ..+|.-++.++...|+ +|+.+.+...
T Consensus 8 ~p~t~~a~~~ll-~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~---------------------- 63 (140)
T cd05212 8 VSPVAKAVKELL-NKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI---------------------- 63 (140)
T ss_pred cccHHHHHHHHH-HHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc----------------------
Confidence 444433333323 33343 47999999998 8999999999999998 8888865321
Q ss_pred hHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 255 SISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 255 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
++.+.+ +.+|+|+-++|.+..+. -++++++ ..++.+|...
T Consensus 64 ~l~~~v------~~ADIVvsAtg~~~~i~--~~~ikpG-a~Vidvg~~~ 103 (140)
T cd05212 64 QLQSKV------HDADVVVVGSPKPEKVP--TEWIKPG-ATVINCSPTK 103 (140)
T ss_pred CHHHHH------hhCCEEEEecCCCCccC--HHHcCCC-CEEEEcCCCc
Confidence 122222 24899999999864433 5568887 8888888654
No 437
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.05 E-value=0.11 Score=46.74 Aligned_cols=80 Identities=21% Similarity=0.311 Sum_probs=51.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe-e--eCCCCCCCchHHHHHHHhcCC-
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD-F--INPDDEPNKSISELVKEMTHG- 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~~~~~~~~- 266 (332)
.+++++|+|+ +++|..++..+...|+ +|+++++++++.+.+ ++.|.+. . .|..+ .++..+.+.+....
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD--EDGVQAMVSQIEKEV 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 5678999998 9999999988888999 899998888765432 2334432 2 23322 23333333332111
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
..+|++|.+.|.
T Consensus 86 ~~id~li~~ag~ 97 (265)
T PRK07097 86 GVIDILVNNAGI 97 (265)
T ss_pred CCCCEEEECCCC
Confidence 258999999874
No 438
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=95.04 E-value=0.3 Score=42.91 Aligned_cols=47 Identities=30% Similarity=0.386 Sum_probs=38.1
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc----------chHHHHHHcC
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP----------CRKDKGEAFG 241 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~----------~~~~~~~~lg 241 (332)
-.|.+|+|+|-|.+|..+++++...|.+.|.++|.+. +.++..++.+
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~ 77 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG 77 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence 4688999999999999999999999985666677776 6666665554
No 439
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=95.00 E-value=0.12 Score=46.04 Aligned_cols=33 Identities=24% Similarity=0.444 Sum_probs=29.9
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 043260 199 SVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP 231 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~ 231 (332)
+|||+|+|++|-..+..+...|.+++.++|.+.
T Consensus 1 kVlvvG~GGlG~eilk~La~~Gvg~i~ivD~D~ 33 (234)
T cd01484 1 KVLLVGAGGIGCELLKNLALMGFGQIHVIDMDT 33 (234)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999999999999998654
No 440
>PRK12743 oxidoreductase; Provisional
Probab=94.99 E-value=0.16 Score=45.30 Aligned_cols=79 Identities=11% Similarity=0.039 Sum_probs=48.0
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcC-CcchHH----HHHHcCCC-eee--CCCCCCCchHHHHHHHhcC-C
Q 043260 197 GSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDK-NPCRKD----KGEAFGMT-DFI--NPDDEPNKSISELVKEMTH-G 266 (332)
Q Consensus 197 g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~-~~~~~~----~~~~lga~-~v~--~~~~~~~~~~~~~~~~~~~-~ 266 (332)
++++||+|+ |++|..+++.+...|+ +|+++.+ +.++.+ .+++.|.. ..+ |..+ .++....+.+... -
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD--LPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 468999998 9999999999999999 8877754 433332 22334543 222 3322 2333232322211 1
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
..+|++|.+.|.
T Consensus 79 ~~id~li~~ag~ 90 (256)
T PRK12743 79 GRIDVLVNNAGA 90 (256)
T ss_pred CCCCEEEECCCC
Confidence 258999998874
No 441
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=94.98 E-value=0.094 Score=40.65 Aligned_cols=93 Identities=22% Similarity=0.287 Sum_probs=57.7
Q ss_pred CCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH----cCCC---eeeCCCCCCCchHHHHHHHhcCCCCc
Q 043260 197 GSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA----FGMT---DFINPDDEPNKSISELVKEMTHGTGV 269 (332)
Q Consensus 197 g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~~~~~~~~~g~ 269 (332)
|.+||-.|+|. |...+.+++.. ..+++.++.+++..+.++. .+.+ .++. .++.+..... ....+
T Consensus 1 g~~vlD~~~G~-G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~------~D~~~~~~~~-~~~~~ 71 (117)
T PF13659_consen 1 GDRVLDPGCGS-GTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIV------GDARDLPEPL-PDGKF 71 (117)
T ss_dssp TEEEEEETSTT-CHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE------SHHHHHHHTC-TTT-E
T ss_pred CCEEEEcCcch-HHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEE------Cchhhchhhc-cCcee
Confidence 56788887644 44444555544 4499999999998887754 3332 2221 3343333223 34589
Q ss_pred cEEEEcCCC--------------hHHHHHHHHHhccCCcEEEEE
Q 043260 270 DYGFECTGV--------------ASLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 270 d~vid~~g~--------------~~~~~~~~~~l~~~~G~~v~~ 299 (332)
|+|+-+..- ...+..+.+.|+++ |+++++
T Consensus 72 D~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~ 114 (117)
T PF13659_consen 72 DLIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI 114 (117)
T ss_dssp EEEEE--STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEEEECCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 999985432 13478999999998 998875
No 442
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.96 E-value=0.17 Score=46.67 Aligned_cols=82 Identities=20% Similarity=0.162 Sum_probs=48.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCc-chHH-H---HHHcCCCeeeCCCCC-CCchHHHHHHHhcCCCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNP-CRKD-K---GEAFGMTDFINPDDE-PNKSISELVKEMTHGTG 268 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~-~~~~-~---~~~lga~~v~~~~~~-~~~~~~~~~~~~~~~~g 268 (332)
.|+++||+|+ +++|...++.+...|+ +|++.++.. ++.+ . +++.|.......-+. +.++..+.+.+...-.+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 5788999998 9999999999988999 888887643 2322 2 233343322211111 12233332222111126
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
+|++|+++|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 443
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=94.96 E-value=0.11 Score=41.52 Aligned_cols=81 Identities=17% Similarity=0.334 Sum_probs=50.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEc-CCcchHHHHHH-cCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEE
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGID-KNPCRKDKGEA-FGMTDFINPDDEPNKSISELVKEMTHGTGVDYGF 273 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~-~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vi 273 (332)
+.-+|-|+|+|-+|..+...++..|. +|..+. ++.++.+.+.. ++...+.+..+ .. ..+|++|
T Consensus 9 ~~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------------~~--~~aDlv~ 73 (127)
T PF10727_consen 9 ARLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE------------IL--RDADLVF 73 (127)
T ss_dssp ---EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG------------GG--CC-SEEE
T ss_pred CccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc------------cc--ccCCEEE
Confidence 34679999999999999999999998 887764 44555555544 44444433321 22 2589999
Q ss_pred EcCCChHHHHHHHHHhccC
Q 043260 274 ECTGVASLISEALEATKLG 292 (332)
Q Consensus 274 d~~g~~~~~~~~~~~l~~~ 292 (332)
-++.+ +.+....+.|...
T Consensus 74 iavpD-daI~~va~~La~~ 91 (127)
T PF10727_consen 74 IAVPD-DAIAEVAEQLAQY 91 (127)
T ss_dssp E-S-C-CHHHHHHHHHHCC
T ss_pred EEech-HHHHHHHHHHHHh
Confidence 99999 4778777777653
No 444
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.94 E-value=0.15 Score=45.35 Aligned_cols=80 Identities=16% Similarity=0.153 Sum_probs=51.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe-e--eCCCCCCCchHHHHHHHhcC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD-F--INPDDEPNKSISELVKEMTH-G 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~~~~~~~-~ 266 (332)
.++++||+|+ +++|..++..+...|. +|++++++.++.+.+ ++.+.+. + .|..+ .++..+.+..... -
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4789999998 9999999999889998 888888877665432 2234331 2 23332 2333333332211 1
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
.++|++|.+.|.
T Consensus 87 ~~~d~li~~ag~ 98 (255)
T PRK06113 87 GKVDILVNNAGG 98 (255)
T ss_pred CCCCEEEECCCC
Confidence 258999998873
No 445
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.93 E-value=0.22 Score=45.29 Aligned_cols=103 Identities=12% Similarity=0.021 Sum_probs=61.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcC-C-CeeeCCCCC--CCchHHHHHHHhcCCCCcc
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFG-M-TDFINPDDE--PNKSISELVKEMTHGTGVD 270 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lg-a-~~v~~~~~~--~~~~~~~~~~~~~~~~g~d 270 (332)
...++||++|+|. |..+..+++.....++++++.+++-.+.+++.- . ...++.... ...+..+.+++. ...+|
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~--~~~yD 147 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADT--ENTFD 147 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhC--CCCcc
Confidence 3456999999866 445556666555568999999988777766531 0 000000000 002233334332 23799
Q ss_pred EEEEcCC----------ChHHHHHHHHHhccCCcEEEEEcC
Q 043260 271 YGFECTG----------VASLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 271 ~vid~~g----------~~~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
+||-... +.+.+..+.+.|+++ |.++....
T Consensus 148 vIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~~ 187 (270)
T TIGR00417 148 VIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQSE 187 (270)
T ss_pred EEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcCC
Confidence 9986443 224567889999998 99988743
No 446
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.91 E-value=0.24 Score=45.38 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=34.6
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE 238 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~ 238 (332)
.+|.|+|+|.+|...++.+...|. +|++.++++++++.++
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~~ 43 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGF-DVTIYDISDEALEKAK 43 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHHH
Confidence 479999999999999999888898 9999999988766553
No 447
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=94.90 E-value=0.24 Score=42.42 Aligned_cols=95 Identities=26% Similarity=0.420 Sum_probs=55.5
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhc-CC----------
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMT-HG---------- 266 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~-~~---------- 266 (332)
++|.|+|.|-+|+-++..+...|. +|+++|.++++.+.+.+ |-..+. + ..+.+.+++.. .+
T Consensus 1 M~I~ViGlGyvGl~~A~~lA~~G~-~V~g~D~~~~~v~~l~~-g~~p~~---E---~~l~~ll~~~~~~~~l~~t~~~~~ 72 (185)
T PF03721_consen 1 MKIAVIGLGYVGLPLAAALAEKGH-QVIGVDIDEEKVEALNN-GELPIY---E---PGLDELLKENVSAGRLRATTDIEE 72 (185)
T ss_dssp -EEEEE--STTHHHHHHHHHHTTS-EEEEE-S-HHHHHHHHT-TSSSS----C---TTHHHHHHHHHHTTSEEEESEHHH
T ss_pred CEEEEECCCcchHHHHHHHHhCCC-EEEEEeCChHHHHHHhh-cccccc---c---cchhhhhccccccccchhhhhhhh
Confidence 478899999999999999999999 99999999999887765 322221 1 33444444322 11
Q ss_pred --CCccEEEEcCCCh-------------HHHHHHHHHhccCCcEEEEEcCC
Q 043260 267 --TGVDYGFECTGVA-------------SLISEALEATKLGKGKVMAIGAA 302 (332)
Q Consensus 267 --~g~d~vid~~g~~-------------~~~~~~~~~l~~~~G~~v~~G~~ 302 (332)
...|++|-|++++ +++..+.+.+++ +.++.+-+.
T Consensus 73 ai~~adv~~I~VpTP~~~~~~~Dls~v~~a~~~i~~~l~~--~~lvV~~ST 121 (185)
T PF03721_consen 73 AIKDADVVFICVPTPSDEDGSPDLSYVESAIESIAPVLRP--GDLVVIEST 121 (185)
T ss_dssp HHHH-SEEEE----EBETTTSBETHHHHHHHHHHHHHHCS--CEEEEESSS
T ss_pred hhhccceEEEecCCCccccCCccHHHHHHHHHHHHHHHhh--cceEEEccE
Confidence 1379999999875 234444445554 566666544
No 448
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.89 E-value=0.16 Score=47.77 Aligned_cols=37 Identities=24% Similarity=0.469 Sum_probs=33.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcch
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCR 233 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~ 233 (332)
.|++|.|+|.|.+|...++.++.+|. +|++.+++.+.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 57899999999999999999999999 99999987543
No 449
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.87 E-value=0.14 Score=45.07 Aligned_cols=80 Identities=20% Similarity=0.234 Sum_probs=51.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCCC-eee--CCCCCCCchHHHHHHHhcC-CCCc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGMT-DFI--NPDDEPNKSISELVKEMTH-GTGV 269 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~-~v~--~~~~~~~~~~~~~~~~~~~-~~g~ 269 (332)
++.++||+|+ |.+|..+++.+...|. .|++.+++.++++.+ ..++.. .++ |..+ .+++.+.+.+... -.++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD--RDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 4678999998 9999999999988998 888888877766543 334432 122 2222 2333333322211 1258
Q ss_pred cEEEEcCCC
Q 043260 270 DYGFECTGV 278 (332)
Q Consensus 270 d~vid~~g~ 278 (332)
|.+|.+.|.
T Consensus 82 d~vi~~ag~ 90 (245)
T PRK12936 82 DILVNNAGI 90 (245)
T ss_pred CEEEECCCC
Confidence 999999884
No 450
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.86 E-value=0.16 Score=44.67 Aligned_cols=82 Identities=13% Similarity=0.234 Sum_probs=51.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe-eeCCCCCCCchHHHHHHHhcC-CCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD-FINPDDEPNKSISELVKEMTH-GTG 268 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v~~~~~~~~~~~~~~~~~~~~-~~g 268 (332)
.+.+++|+|+ |.+|..++..+...|. +|+++++++++.+.. +..+... ++..+-....++.+.+++... -.+
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 9999999998888999 999999987665432 2233221 222221112334333333211 126
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998874
No 451
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.86 E-value=0.2 Score=50.43 Aligned_cols=95 Identities=14% Similarity=0.191 Sum_probs=64.4
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCC
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTG 277 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g 277 (332)
+.++|+|.|.+|+..++.++..|. +++++|.++++.+.+++.|...+. .+. .+ .+.++ ..+-..+|.++-+++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~-GD~---~~-~~~L~-~a~i~~a~~viv~~~ 490 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVL-GNA---AN-EEIMQ-LAHLDCARWLLLTIP 490 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEE-cCC---CC-HHHHH-hcCccccCEEEEEcC
Confidence 678999999999999999999998 999999999999999988865544 221 11 12232 233346898888877
Q ss_pred ChHH---HHHHHHHhccCCcEEEEEc
Q 043260 278 VASL---ISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 278 ~~~~---~~~~~~~l~~~~G~~v~~G 300 (332)
+.+. +-...+...+. -+++.-.
T Consensus 491 ~~~~~~~iv~~~~~~~~~-~~iiar~ 515 (558)
T PRK10669 491 NGYEAGEIVASAREKRPD-IEIIARA 515 (558)
T ss_pred ChHHHHHHHHHHHHHCCC-CeEEEEE
Confidence 6432 22333444444 5555443
No 452
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=94.85 E-value=0.13 Score=45.25 Aligned_cols=100 Identities=22% Similarity=0.320 Sum_probs=65.1
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHH----cCCCe--eeCCCCCCCchHHHHHHH
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGA-AKIIGIDKNPCRKDKGEA----FGMTD--FINPDDEPNKSISELVKE 262 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~~~~ 262 (332)
....++++++||=+|+|. |..+..+++..+. .+|+.+|.+++..+.+++ .+.+. ++..+. .+
T Consensus 39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~----------~~ 107 (231)
T TIGR02752 39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNA----------ME 107 (231)
T ss_pred HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEech----------hc
Confidence 455678899999999876 6677777777642 389999999887766543 23322 222111 11
Q ss_pred h-cCCCCccEEEEcCC-----C-hHHHHHHHHHhccCCcEEEEEcC
Q 043260 263 M-THGTGVDYGFECTG-----V-ASLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 263 ~-~~~~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
. .....+|+|+-+.. . ...+.++.+.|+++ |.++++-.
T Consensus 108 ~~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 152 (231)
T TIGR02752 108 LPFDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET 152 (231)
T ss_pred CCCCCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence 1 12336999986432 1 23567889999998 99987643
No 453
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=94.84 E-value=0.065 Score=44.50 Aligned_cols=93 Identities=14% Similarity=0.109 Sum_probs=58.2
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCC------CeeeCCCCCCCchHHHHHHHhcCCCCccEE
Q 043260 199 SVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGM------TDFINPDDEPNKSISELVKEMTHGTGVDYG 272 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga------~~v~~~~~~~~~~~~~~~~~~~~~~g~d~v 272 (332)
+|.|+|+|..|.+++..+...|. +|.+..++++..+.+++-+. +..+...-....++.+.+ .++|+|
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~------~~ad~I 73 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL------EDADII 73 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH------TT-SEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh------CcccEE
Confidence 58899999999999999999997 99999999887776655321 111111100113333333 258999
Q ss_pred EEcCCChHHHHHHHHHhccC--CcEEEEE
Q 043260 273 FECTGVASLISEALEATKLG--KGKVMAI 299 (332)
Q Consensus 273 id~~g~~~~~~~~~~~l~~~--~G~~v~~ 299 (332)
+-++.+. .+...++.+++. .+..+..
T Consensus 74 iiavPs~-~~~~~~~~l~~~l~~~~~ii~ 101 (157)
T PF01210_consen 74 IIAVPSQ-AHREVLEQLAPYLKKGQIIIS 101 (157)
T ss_dssp EE-S-GG-GHHHHHHHHTTTSHTT-EEEE
T ss_pred EecccHH-HHHHHHHHHhhccCCCCEEEE
Confidence 9999984 556666666653 1444444
No 454
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=94.84 E-value=0.34 Score=44.68 Aligned_cols=43 Identities=26% Similarity=0.442 Sum_probs=37.1
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCC
Q 043260 199 SVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGM 242 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga 242 (332)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~ 44 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGA 44 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCC
Confidence 68899999999988888888898 89999999988887776664
No 455
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=94.83 E-value=0.31 Score=45.09 Aligned_cols=93 Identities=18% Similarity=0.220 Sum_probs=60.2
Q ss_pred EEEEECCChHHHHHHHHHHHcCCC-eEEEEcCCcchHHH-HHHc-------CCCeeeCCCCCCCchHHHHHHHhcCCCCc
Q 043260 199 SVAVFGLGAVGLGVMDRARIQGAA-KIIGIDKNPCRKDK-GEAF-------GMTDFINPDDEPNKSISELVKEMTHGTGV 269 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~G~~-~Vi~~~~~~~~~~~-~~~l-------ga~~v~~~~~~~~~~~~~~~~~~~~~~g~ 269 (332)
+|.|+|+|.+|..++..+...|.. +|+++++++++.+. +.++ +....+.. .++. .+ .++
T Consensus 2 kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~-----~~~~-~l------~~a 69 (306)
T cd05291 2 KVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA-----GDYS-DC------KDA 69 (306)
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc-----CCHH-Hh------CCC
Confidence 689999999999999998888863 89999998877542 2222 22111111 1121 11 369
Q ss_pred cEEEEcCCCh---------------HHHH---HHHHHhccCCcEEEEEcCCCC
Q 043260 270 DYGFECTGVA---------------SLIS---EALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 270 d~vid~~g~~---------------~~~~---~~~~~l~~~~G~~v~~G~~~~ 304 (332)
|+||.++|.+ ..+. ..++..++. +.++.++++.+
T Consensus 70 DIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~-~~vivvsNP~d 121 (306)
T cd05291 70 DIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFD-GIFLVASNPVD 121 (306)
T ss_pred CEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEecChHH
Confidence 9999999974 1122 233344565 88888887653
No 456
>PLN02928 oxidoreductase family protein
Probab=94.83 E-value=0.21 Score=47.18 Aligned_cols=35 Identities=29% Similarity=0.541 Sum_probs=32.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNP 231 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~ 231 (332)
.|+++.|+|.|.+|..+++.++.+|+ +|++++++.
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~ 192 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSW 192 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCC
Confidence 57899999999999999999999999 999998864
No 457
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.81 E-value=0.054 Score=44.35 Aligned_cols=98 Identities=16% Similarity=0.167 Sum_probs=58.5
Q ss_pred EEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCC---CCchHHHHHHHhcCCCCccEEEEcC
Q 043260 200 VAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDE---PNKSISELVKEMTHGTGVDYGFECT 276 (332)
Q Consensus 200 vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~---~~~~~~~~~~~~~~~~g~d~vid~~ 276 (332)
|+|+|+|++|...+..++..|. +|..+.+.+ +.+..++.|........+. ........ ......+|+||-|+
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~viv~v 75 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP---SADAGPYDLVIVAV 75 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH---GHHHSTESEEEE-S
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc---hhccCCCcEEEEEe
Confidence 6899999999998888888998 999999888 7777766553221111000 00000000 01123699999999
Q ss_pred CChH---HHHHHHHHhccCCcEEEEEcCCC
Q 043260 277 GVAS---LISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 277 g~~~---~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
-+.+ .+..+...+.+. ..++.+.+--
T Consensus 76 Ka~~~~~~l~~l~~~~~~~-t~iv~~qNG~ 104 (151)
T PF02558_consen 76 KAYQLEQALQSLKPYLDPN-TTIVSLQNGM 104 (151)
T ss_dssp SGGGHHHHHHHHCTGEETT-EEEEEESSSS
T ss_pred cccchHHHHHHHhhccCCC-cEEEEEeCCC
Confidence 7742 333444444444 6777776544
No 458
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=94.81 E-value=0.34 Score=44.68 Aligned_cols=43 Identities=28% Similarity=0.543 Sum_probs=37.0
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCC
Q 043260 199 SVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGM 242 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga 242 (332)
+|.++|.|.+|...+.-+...|. +|++.++++++.+.+++.|+
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~ 44 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGI 44 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCC
Confidence 58889999999988888888898 89999999988887777764
No 459
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.80 E-value=0.13 Score=45.86 Aligned_cols=74 Identities=16% Similarity=0.249 Sum_probs=47.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCC-ee--eCCCCCCCchHHHHHHHhcC-CCCcc
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMT-DF--INPDDEPNKSISELVKEMTH-GTGVD 270 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~-~v--~~~~~~~~~~~~~~~~~~~~-~~g~d 270 (332)
+|+++||+|+ |++|...++.+...|+ +|++++++..+. .+.. .. .|..+ .++..+.+.+... -.++|
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 79 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTT--AEGCAAVARAVLERLGGVD 79 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCC--HHHHHHHHHHHHHHcCCCC
Confidence 5789999998 9999999999988999 899998875432 1211 11 23322 2333222222211 12589
Q ss_pred EEEEcCC
Q 043260 271 YGFECTG 277 (332)
Q Consensus 271 ~vid~~g 277 (332)
++|++.|
T Consensus 80 ~vi~~ag 86 (260)
T PRK06523 80 ILVHVLG 86 (260)
T ss_pred EEEECCc
Confidence 9999987
No 460
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.79 E-value=0.087 Score=47.19 Aligned_cols=107 Identities=22% Similarity=0.286 Sum_probs=66.9
Q ss_pred HHhhCCCCCCEEEEECCChHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHH----cCCCe--eeCCCCCCCchHHHHHH
Q 043260 189 WKEFKVEKGSSVAVFGLGAVGLGVMDRARIQG-AAKIIGIDKNPCRKDKGEA----FGMTD--FINPDDEPNKSISELVK 261 (332)
Q Consensus 189 ~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~~~ 261 (332)
....+++||++|+=.|.|. |.+...+++..| -.+|+-.+.++++.+.+++ .|.+. .+...+...+.+.+
T Consensus 33 ~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~--- 108 (247)
T PF08704_consen 33 LMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDE--- 108 (247)
T ss_dssp HHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--ST---
T ss_pred HHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccc---
Confidence 3567999999999887755 667777777765 3589999999998876643 56542 22222201122210
Q ss_pred HhcCCCCccEEEEcCCCh-HHHHHHHHHh-ccCCcEEEEEcCC
Q 043260 262 EMTHGTGVDYGFECTGVA-SLISEALEAT-KLGKGKVMAIGAA 302 (332)
Q Consensus 262 ~~~~~~g~d~vid~~g~~-~~~~~~~~~l-~~~~G~~v~~G~~ 302 (332)
++ ...+|.||--...+ ..+..+.+.| +++ |+++.+...
T Consensus 109 ~~--~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP~ 148 (247)
T PF08704_consen 109 EL--ESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSPC 148 (247)
T ss_dssp T---TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEESS
T ss_pred cc--cCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCC
Confidence 11 23689888777765 4788999999 887 999988654
No 461
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.78 E-value=0.74 Score=35.76 Aligned_cols=88 Identities=22% Similarity=0.320 Sum_probs=62.0
Q ss_pred EEEEECCChHHHHHHHHHHHc--CCCeEE-EEcCCcchHHH-HHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEE
Q 043260 199 SVAVFGLGAVGLGVMDRARIQ--GAAKII-GIDKNPCRKDK-GEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFE 274 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~--G~~~Vi-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid 274 (332)
+++|+|.|.+|......++.. +. +++ ++++++++.+. .+++|.. .+ .++.+.+.+ ..+|+|+-
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~-------~~~~~ll~~----~~~D~V~I 68 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY-------TDLEELLAD----EDVDAVII 68 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE-------SSHHHHHHH----TTESEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch-------hHHHHHHHh----hcCCEEEE
Confidence 588999999999888666665 44 554 56777777664 5667776 43 223333332 26999999
Q ss_pred cCCChHHHHHHHHHhccCCcEEEEEcC
Q 043260 275 CTGVASLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 275 ~~g~~~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
++.+..+...+.+++..+ .-+++--
T Consensus 69 ~tp~~~h~~~~~~~l~~g--~~v~~EK 93 (120)
T PF01408_consen 69 ATPPSSHAEIAKKALEAG--KHVLVEK 93 (120)
T ss_dssp ESSGGGHHHHHHHHHHTT--SEEEEES
T ss_pred ecCCcchHHHHHHHHHcC--CEEEEEc
Confidence 999988888888888874 5566553
No 462
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=94.78 E-value=0.27 Score=43.93 Aligned_cols=98 Identities=16% Similarity=0.189 Sum_probs=64.5
Q ss_pred hCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCC-CeeeCCCCCCCchHHHHHHHhcCCCCcc
Q 043260 192 FKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGM-TDFINPDDEPNKSISELVKEMTHGTGVD 270 (332)
Q Consensus 192 ~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~~~~~~~~~g~d 270 (332)
....++++||-+|+|. |..+..+++ .|. +|+++|.+++.++.+++... ..++..+. .+ + ......||
T Consensus 38 l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~---~~----~--~~~~~~fD 105 (251)
T PRK10258 38 LPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI---ES----L--PLATATFD 105 (251)
T ss_pred cCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc---cc----C--cCCCCcEE
Confidence 3345678899999976 666555554 576 99999999998888877543 22222211 11 1 01233699
Q ss_pred EEEEcCCC------hHHHHHHHHHhccCCcEEEEEcCC
Q 043260 271 YGFECTGV------ASLISEALEATKLGKGKVMAIGAA 302 (332)
Q Consensus 271 ~vid~~g~------~~~~~~~~~~l~~~~G~~v~~G~~ 302 (332)
+|+....- ...+.++.+.|+++ |.+++....
T Consensus 106 ~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~~ 142 (251)
T PRK10258 106 LAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTLV 142 (251)
T ss_pred EEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence 99975432 24578899999998 999877543
No 463
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=94.77 E-value=0.22 Score=45.67 Aligned_cols=81 Identities=17% Similarity=0.197 Sum_probs=57.2
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-----HHcCCC---eeeCCCCCCCchHHHHHHHhcC
Q 043260 195 EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-----EAFGMT---DFINPDDEPNKSISELVKEMTH 265 (332)
Q Consensus 195 ~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-----~~lga~---~v~~~~~~~~~~~~~~~~~~~~ 265 (332)
+.|++.+|.|+ .++|.+-+.-+...|. +|+.+.|+++|++.. ++.+.. .++|... .+...+.+++...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~--~~~~ye~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK--GDEVYEKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC--CchhHHHHHHHhc
Confidence 45688999999 8999886655555999 899999999999754 333432 2355555 1223455666666
Q ss_pred CCCccEEEEcCCC
Q 043260 266 GTGVDYGFECTGV 278 (332)
Q Consensus 266 ~~g~d~vid~~g~ 278 (332)
+..+-+.++++|.
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 6577889999885
No 464
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=94.77 E-value=0.26 Score=45.07 Aligned_cols=95 Identities=14% Similarity=0.126 Sum_probs=65.8
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHc------CCC-eeeCCCCCCCchHHHHHHHhcCCCCcc
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAF------GMT-DFINPDDEPNKSISELVKEMTHGTGVD 270 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~l------ga~-~v~~~~~~~~~~~~~~~~~~~~~~g~d 270 (332)
++|||+|.|. |-.+-.+++....+++++++.+++-.+++++. |++ .-++.. .++-.+.+++... +||
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~---i~Dg~~~v~~~~~--~fD 151 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEII---IDDGVEFLRDCEE--KFD 151 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEE---eccHHHHHHhCCC--cCC
Confidence 5899998755 55666777777778999999999999988773 233 111111 1334455655433 799
Q ss_pred EEEEcCCC----------hHHHHHHHHHhccCCcEEEEE
Q 043260 271 YGFECTGV----------ASLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 271 ~vid~~g~----------~~~~~~~~~~l~~~~G~~v~~ 299 (332)
+||--+.+ ...+..+-++|+++ |.++.-
T Consensus 152 vIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 152 VIIVDSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred EEEEcCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 99874443 24678999999998 988876
No 465
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=94.76 E-value=0.15 Score=46.76 Aligned_cols=93 Identities=15% Similarity=0.099 Sum_probs=58.3
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCe---eeCCCCCCCchHHHHHHHhcCCCCccEEEEc
Q 043260 199 SVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTD---FINPDDEPNKSISELVKEMTHGTGVDYGFEC 275 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~---v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~ 275 (332)
+|+|+|+|.+|...+..+...|. +|++++++.++.+.+++.|... ..........+ ..+. ..+|+||-+
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~---~~~d~vila 73 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRLEDGEITVPVLAADD----PAEL---GPQDLVILA 73 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcccCCceeecccCCCC----hhHc---CCCCEEEEe
Confidence 68999999999998888888898 8999999888777776656421 00000000011 1111 368999999
Q ss_pred CCChHHHHHHHHHhc----cCCcEEEEEcC
Q 043260 276 TGVASLISEALEATK----LGKGKVMAIGA 301 (332)
Q Consensus 276 ~g~~~~~~~~~~~l~----~~~G~~v~~G~ 301 (332)
+... .+..+++.++ ++ ..++.+.+
T Consensus 74 ~k~~-~~~~~~~~l~~~l~~~-~~iv~~~n 101 (304)
T PRK06522 74 VKAY-QLPAALPSLAPLLGPD-TPVLFLQN 101 (304)
T ss_pred cccc-cHHHHHHHHhhhcCCC-CEEEEecC
Confidence 8874 3344444444 33 45665543
No 466
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=94.76 E-value=0.38 Score=45.73 Aligned_cols=90 Identities=18% Similarity=0.263 Sum_probs=61.2
Q ss_pred CEEEEECC-ChHHHHHHHHHHHc--CCCeEEEEc--CCcchH-HHHHHcCCCeeeCCCCCCCchHHHHHHH---------
Q 043260 198 SSVAVFGL-GAVGLGVMDRARIQ--GAAKIIGID--KNPCRK-DKGEAFGMTDFINPDDEPNKSISELVKE--------- 262 (332)
Q Consensus 198 ~~vlV~G~-g~vG~~~~~la~~~--G~~~Vi~~~--~~~~~~-~~~~~lga~~v~~~~~~~~~~~~~~~~~--------- 262 (332)
++|.|+|+ |.+|..++...+.. .+ +|++.. ++.+++ +.+++++...+...++ ...+.+++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~----~~~~~l~~~l~~~~~~v 76 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADE----EAAKELKEALAAAGIEV 76 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHhhccCCceE
Confidence 47899997 99999999988765 46 677664 444444 4667888887665442 22222222
Q ss_pred ---------hcCCCCccEEEEcCCChHHHHHHHHHhccC
Q 043260 263 ---------MTHGTGVDYGFECTGVASLISEALEATKLG 292 (332)
Q Consensus 263 ---------~~~~~g~d~vid~~g~~~~~~~~~~~l~~~ 292 (332)
+.....+|+|+++.++...+...+..++.|
T Consensus 77 ~~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG 115 (385)
T PRK05447 77 LAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG 115 (385)
T ss_pred EEChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC
Confidence 222235899999999876778888888774
No 467
>PLN03075 nicotianamine synthase; Provisional
Probab=94.75 E-value=0.2 Score=46.03 Aligned_cols=99 Identities=15% Similarity=0.122 Sum_probs=66.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHHHcC-----CCeeeCCCCCCCchHHHHHHHhcCCCCc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQG-AAKIIGIDKNPCRKDKGEAFG-----MTDFINPDDEPNKSISELVKEMTHGTGV 269 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G-~~~Vi~~~~~~~~~~~~~~lg-----a~~v~~~~~~~~~~~~~~~~~~~~~~g~ 269 (332)
+.++|+-+|+|+.++.++.+++.+. -.+++.+|.+++..+.+++.- ...-+.... .+..+ .......|
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~---~~~~l~~F 196 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMD---VTESLKEY 196 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhh---cccccCCc
Confidence 7789999999999998888887654 237999999999888776632 111111111 11111 11112379
Q ss_pred cEEEEcC------CC-hHHHHHHHHHhccCCcEEEEEcC
Q 043260 270 DYGFECT------GV-ASLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 270 d~vid~~------g~-~~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
|+||-.+ .. ...+....+.|+++ |.+++-..
T Consensus 197 DlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~~ 234 (296)
T PLN03075 197 DVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRSA 234 (296)
T ss_pred CEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEecc
Confidence 9999975 22 24678999999998 88877653
No 468
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=94.74 E-value=0.35 Score=44.55 Aligned_cols=43 Identities=28% Similarity=0.342 Sum_probs=37.5
Q ss_pred EEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCC
Q 043260 199 SVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGM 242 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga 242 (332)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+
T Consensus 3 ~Ig~IGlG~mG~~mA~~l~~~G~-~V~v~d~~~~~~~~~~~~g~ 45 (296)
T PRK15461 3 AIAFIGLGQMGSPMASNLLKQGH-QLQVFDVNPQAVDALVDKGA 45 (296)
T ss_pred eEEEEeeCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHcCC
Confidence 68899999999998888888898 89999999998887777664
No 469
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.73 E-value=0.13 Score=48.33 Aligned_cols=76 Identities=17% Similarity=0.127 Sum_probs=48.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcC--CC-eee--CCCCCCCchHHHHHHHhcCCCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFG--MT-DFI--NPDDEPNKSISELVKEMTHGTG 268 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lg--a~-~v~--~~~~~~~~~~~~~~~~~~~~~g 268 (332)
++++|||+|+ |.+|..+++.+...|. +|++++++....... ..++ .. ..+ |..+ .+ .+.+.....+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~----~~~~~~~~~~ 75 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD--AA----KLRKAIAEFK 75 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC--HH----HHHHHHhhcC
Confidence 4688999998 9999999999999998 899998776543221 2222 11 112 2222 12 2333333336
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
+|+||++++.
T Consensus 76 ~d~vih~A~~ 85 (349)
T TIGR02622 76 PEIVFHLAAQ 85 (349)
T ss_pred CCEEEECCcc
Confidence 8999999873
No 470
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=94.72 E-value=0.36 Score=35.57 Aligned_cols=35 Identities=34% Similarity=0.561 Sum_probs=29.9
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcC
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDK 229 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~ 229 (332)
-.+++++|+|+|.+|..+++.+...+..+|.+.++
T Consensus 21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 46789999999999999999999886558888866
No 471
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.72 E-value=0.18 Score=44.64 Aligned_cols=79 Identities=16% Similarity=0.291 Sum_probs=50.5
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH----cCCCe-e--eCCCCCCCchHHHHHHHhc-CCC
Q 043260 197 GSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA----FGMTD-F--INPDDEPNKSISELVKEMT-HGT 267 (332)
Q Consensus 197 g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~-v--~~~~~~~~~~~~~~~~~~~-~~~ 267 (332)
++++||+|+ |.+|..++..+...|. +|++++++.++.+.+.+ .+... . .|..+ .+++.+.+.+.. .-.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFG 77 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcC
Confidence 357999998 9999999998888999 89999998876654432 23221 1 23332 233333332221 112
Q ss_pred CccEEEEcCCC
Q 043260 268 GVDYGFECTGV 278 (332)
Q Consensus 268 g~d~vid~~g~ 278 (332)
+.|+||.+.+.
T Consensus 78 ~~d~vi~~a~~ 88 (255)
T TIGR01963 78 GLDILVNNAGI 88 (255)
T ss_pred CCCEEEECCCC
Confidence 58999998864
No 472
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=94.71 E-value=0.46 Score=44.21 Aligned_cols=102 Identities=13% Similarity=0.147 Sum_probs=63.2
Q ss_pred HHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHH---HHHHc-CCC---eeeCCCCCCCchHH
Q 043260 185 FGAAWKEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKD---KGEAF-GMT---DFINPDDEPNKSIS 257 (332)
Q Consensus 185 ~~al~~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~---~~~~l-ga~---~v~~~~~~~~~~~~ 257 (332)
|..+.......+|++||-+|+|. |..+..++. .|...|+++|.++.-+. .++++ +.+ .+... +
T Consensus 110 ~~~~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~-~g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~------~-- 179 (314)
T TIGR00452 110 WDRVLPHLSPLKGRTILDVGCGS-GYHMWRMLG-HGAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPL------G-- 179 (314)
T ss_pred HHHHHHhcCCCCCCEEEEeccCC-cHHHHHHHH-cCCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEEC------C--
Confidence 33343445667889999999977 666666655 46658999998885443 22222 211 22211 1
Q ss_pred HHHHHhcCCCCccEEEEcC-----CCh-HHHHHHHHHhccCCcEEEEE
Q 043260 258 ELVKEMTHGTGVDYGFECT-----GVA-SLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 258 ~~~~~~~~~~g~d~vid~~-----g~~-~~~~~~~~~l~~~~G~~v~~ 299 (332)
+.++.....||+|+... .++ ..+.++.+.|+++ |++++-
T Consensus 180 --ie~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle 224 (314)
T TIGR00452 180 --IEQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE 224 (314)
T ss_pred --HHHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence 22232223699998743 122 5788999999998 998863
No 473
>PRK08655 prephenate dehydrogenase; Provisional
Probab=94.69 E-value=0.31 Score=47.52 Aligned_cols=87 Identities=15% Similarity=0.244 Sum_probs=54.9
Q ss_pred EEEEEC-CChHHHHHHHHHHHcCCCeEEEEcCCcchH-HHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcC
Q 043260 199 SVAVFG-LGAVGLGVMDRARIQGAAKIIGIDKNPCRK-DKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECT 276 (332)
Q Consensus 199 ~vlV~G-~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~-~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~ 276 (332)
+|+|+| .|.+|.+.+..++..|. +|+++++++++. +.+.++|.... .+..+.+ ..+|+||-|+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~-~V~v~~r~~~~~~~~a~~~gv~~~--------~~~~e~~------~~aDvVIlav 66 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGF-EVIVTGRDPKKGKEVAKELGVEYA--------NDNIDAA------KDADIVIISV 66 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHcCCeec--------cCHHHHh------ccCCEEEEec
Confidence 688998 59999999999999998 899999988774 56666775211 1111111 1367777777
Q ss_pred CChHH---HHHHHHHhccCCcEEEEEcC
Q 043260 277 GVASL---ISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 277 g~~~~---~~~~~~~l~~~~G~~v~~G~ 301 (332)
..... +.+....++++ ..++.+++
T Consensus 67 p~~~~~~vl~~l~~~l~~~-~iViDvsS 93 (437)
T PRK08655 67 PINVTEDVIKEVAPHVKEG-SLLMDVTS 93 (437)
T ss_pred CHHHHHHHHHHHHhhCCCC-CEEEEccc
Confidence 65321 22333334444 55666665
No 474
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.14 Score=46.13 Aligned_cols=77 Identities=18% Similarity=0.227 Sum_probs=49.1
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe-ee--CCCCCCCchHHHHHHHhcC-CCCc
Q 043260 199 SVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD-FI--NPDDEPNKSISELVKEMTH-GTGV 269 (332)
Q Consensus 199 ~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v~--~~~~~~~~~~~~~~~~~~~-~~g~ 269 (332)
++||+|+ |++|..+++.+...|. +|++++++.++.+.+ +..+.+. ++ |..+ ..++.+.+..... ..++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD--YSQLTALAQACEEKWGGI 78 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 6899998 9999999988888999 899999888765532 2234332 22 2222 2233332322211 1258
Q ss_pred cEEEEcCCC
Q 043260 270 DYGFECTGV 278 (332)
Q Consensus 270 d~vid~~g~ 278 (332)
|++|.++|.
T Consensus 79 d~lI~~ag~ 87 (270)
T PRK05650 79 DVIVNNAGV 87 (270)
T ss_pred CEEEECCCC
Confidence 999999884
No 475
>PRK06849 hypothetical protein; Provisional
Probab=94.68 E-value=0.24 Score=47.45 Aligned_cols=95 Identities=13% Similarity=0.064 Sum_probs=62.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCee--eCCCCCCCchHHHHHHHhcCCCCccEE
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDF--INPDDEPNKSISELVKEMTHGTGVDYG 272 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v--~~~~~~~~~~~~~~~~~~~~~~g~d~v 272 (332)
..++|||+|+ .+.|+..++.++..|. +|++++.++...... ...++.. +.....+.+.+.+.+.++....++|+|
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~-s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRF-SRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHH-HHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 4588999998 6789999999999999 999998876544321 1223332 322221235567777777666689999
Q ss_pred EEcCCChHHHHHHHHHhccC
Q 043260 273 FECTGVASLISEALEATKLG 292 (332)
Q Consensus 273 id~~g~~~~~~~~~~~l~~~ 292 (332)
|-+......+....+.+.+.
T Consensus 81 IP~~e~~~~~a~~~~~l~~~ 100 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSAY 100 (389)
T ss_pred EECChHHHhHHhhhhhhcCC
Confidence 98876432333444556554
No 476
>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]
Probab=94.63 E-value=0.2 Score=45.80 Aligned_cols=115 Identities=22% Similarity=0.247 Sum_probs=69.0
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH--------HHcCCCee---------------eCCCCC
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG--------EAFGMTDF---------------INPDDE 251 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~--------~~lga~~v---------------~~~~~~ 251 (332)
-.++=|+|+|+|++|.+++.++.+.|++++-++|-+.-.+.-+ ...|-.++ ++.+.
T Consensus 72 l~~syVVVVG~GgVGSwv~nmL~RSG~qKi~iVDfdqVSlsSLNrHs~Atl~DVG~PK~~clkkh~skiaPw~eIdar~- 150 (430)
T KOG2018|consen 72 LTNSYVVVVGAGGVGSWVANMLLRSGVQKIRIVDFDQVSLSSLNRHSCATLADVGTPKVMCLKKHFSKIAPWCEIDARN- 150 (430)
T ss_pred hcCcEEEEEecCchhHHHHHHHHHhcCceEEEechhhccHhhhhhhhhhhHhhcCCchHHHHHHHHHhhCccceecHHH-
Confidence 3567788899999999999999999999999998766544321 22232111 11111
Q ss_pred CCchHH-HHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCc--EEEEEcCCCC-CcccCChHhH
Q 043260 252 PNKSIS-ELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKG--KVMAIGAANE-AKVPLNFPAI 314 (332)
Q Consensus 252 ~~~~~~-~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G--~~v~~G~~~~-~~~~~~~~~~ 314 (332)
.-|. +--.+++.| .+|.|+||.-+-++--.+++..-.. | .+...|.... .+..++..++
T Consensus 151 --~l~~~~s~edll~g-nPdFvvDciDNidtKVdLL~y~~~~-~l~Viss~GaaaksDPTrv~v~Di 213 (430)
T KOG2018|consen 151 --MLWTSSSEEDLLSG-NPDFVVDCIDNIDTKVDLLEYCYNH-GLKVISSTGAAAKSDPTRVNVADI 213 (430)
T ss_pred --hhcCCCchhhhhcC-CCCeEeEhhhhhhhhhHHHHHHHHc-CCceEeccCccccCCCceeehhhc
Confidence 0000 001233444 5999999999876655666666555 4 3344455443 5555555443
No 477
>PRK07578 short chain dehydrogenase; Provisional
Probab=94.63 E-value=0.68 Score=39.47 Aligned_cols=88 Identities=19% Similarity=0.268 Sum_probs=54.9
Q ss_pred EEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcCC
Q 043260 199 SVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECTG 277 (332)
Q Consensus 199 ~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~g 277 (332)
+++|+|+ |++|..++..+... . +|++++++.. ....|..+ .++..+.+.+. + ++|++|.+.|
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~----------~~~~D~~~--~~~~~~~~~~~--~-~id~lv~~ag 64 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSG----------DVQVDITD--PASIRALFEKV--G-KVDAVVSAAG 64 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCC----------ceEecCCC--hHHHHHHHHhc--C-CCCEEEECCC
Confidence 6899998 99999888877666 5 8999887653 11223333 23333333332 2 5899999887
Q ss_pred Ch----------H---------------HHHHHHHHhccCCcEEEEEcCCCC
Q 043260 278 VA----------S---------------LISEALEATKLGKGKVMAIGAANE 304 (332)
Q Consensus 278 ~~----------~---------------~~~~~~~~l~~~~G~~v~~G~~~~ 304 (332)
.. + ..+.+...+.++ |+++.++...+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~iss~~~ 115 (199)
T PRK07578 65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG-GSFTLTSGILS 115 (199)
T ss_pred CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEEccccc
Confidence 41 0 123334455666 89998876543
No 478
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.62 E-value=0.29 Score=44.70 Aligned_cols=94 Identities=18% Similarity=0.243 Sum_probs=66.1
Q ss_pred hcccchhhhHHHHHHhhCC-CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCC
Q 043260 176 FLSCGYSSGFGAAWKEFKV-EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPN 253 (332)
Q Consensus 176 ~l~~~~~ta~~al~~~~~~-~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 253 (332)
.+||+....+..+ +..++ -.|++++|+|. ..+|.-++.++...|+ +|+++.+..
T Consensus 138 ~~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T---------------------- 193 (285)
T PRK10792 138 LRPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFT---------------------- 193 (285)
T ss_pred CCCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCC----------------------
Confidence 3455554444434 44444 36999999998 5599999999999998 888875431
Q ss_pred chHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCC
Q 043260 254 KSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAA 302 (332)
Q Consensus 254 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 302 (332)
.++.+.+ +.+|+||.++|.+..+.. ++++++ ..++.+|..
T Consensus 194 ~~l~~~~------~~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin 233 (285)
T PRK10792 194 KNLRHHV------RNADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN 233 (285)
T ss_pred CCHHHHH------hhCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence 2222222 258999999998765543 788998 999999954
No 479
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.62 E-value=0.25 Score=48.68 Aligned_cols=71 Identities=25% Similarity=0.285 Sum_probs=50.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcc-----hHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCc
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPC-----RKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGV 269 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~-----~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~ 269 (332)
..+++|+|+|+|.+|+.++.+++..|. +|++++.++. ..+.+++.|......... . . ...+
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~--------~--~~~~ 79 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP---T--------L--PEDT 79 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c--------c--cCCC
Confidence 357789999999999999999999999 8999986542 123456667655443322 1 0 1258
Q ss_pred cEEEEcCCCh
Q 043260 270 DYGFECTGVA 279 (332)
Q Consensus 270 d~vid~~g~~ 279 (332)
|+||-+.|.+
T Consensus 80 D~Vv~s~Gi~ 89 (480)
T PRK01438 80 DLVVTSPGWR 89 (480)
T ss_pred CEEEECCCcC
Confidence 9999888763
No 480
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.60 E-value=0.26 Score=47.86 Aligned_cols=101 Identities=12% Similarity=0.188 Sum_probs=63.9
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCC-ee--eCCCCCCCchHHHHHHH
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMT-DF--INPDDEPNKSISELVKE 262 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~~~~ 262 (332)
...+.++|++||=+|+|+ |-.+.++++.++..+|+++|.++++++.+ +.+|.+ .+ .+.+. ... ..
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~----~~ 303 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGP----SQ 303 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccc----cc
Confidence 345778999999998755 55555666655534899999999988755 445665 22 22111 111 00
Q ss_pred hcCCCCccEEEE---cCCCh-------------------------HHHHHHHHHhccCCcEEEEE
Q 043260 263 MTHGTGVDYGFE---CTGVA-------------------------SLISEALEATKLGKGKVMAI 299 (332)
Q Consensus 263 ~~~~~g~d~vid---~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~ 299 (332)
......||.||- |+|.. ..+..+++.|+++ |+++..
T Consensus 304 ~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvys 367 (426)
T TIGR00563 304 WAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYA 367 (426)
T ss_pred cccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 112236999985 44421 3667889999998 998865
No 481
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.60 E-value=0.27 Score=44.92 Aligned_cols=95 Identities=16% Similarity=0.254 Sum_probs=65.6
Q ss_pred hcccchhhhHHHHHHhhCC-CCCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCC
Q 043260 176 FLSCGYSSGFGAAWKEFKV-EKGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPN 253 (332)
Q Consensus 176 ~l~~~~~ta~~al~~~~~~-~~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 253 (332)
.+||+....+..+ +.-++ -.|++|+|+|. ..+|.-++.++...|+ +|+++.+. .
T Consensus 137 ~~PcTp~aii~lL-~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs~-------------------t--- 192 (285)
T PRK14189 137 FRPCTPYGVMKML-ESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHSK-------------------T--- 192 (285)
T ss_pred CcCCCHHHHHHHH-HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecCC-------------------C---
Confidence 3455544344333 44443 47999999998 5669999999999998 88875321 1
Q ss_pred chHHHHHHHhcCCCCccEEEEcCCChHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 254 KSISELVKEMTHGTGVDYGFECTGVASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 254 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
.++.+.+ +.+|+|+-++|.+..+.. ++++++ ..++.+|...
T Consensus 193 ~~l~~~~------~~ADIVV~avG~~~~i~~--~~ik~g-avVIDVGin~ 233 (285)
T PRK14189 193 RDLAAHT------RQADIVVAAVGKRNVLTA--DMVKPG-ATVIDVGMNR 233 (285)
T ss_pred CCHHHHh------hhCCEEEEcCCCcCccCH--HHcCCC-CEEEEccccc
Confidence 2232222 248999999998765544 889998 9999999664
No 482
>PRK00536 speE spermidine synthase; Provisional
Probab=94.59 E-value=0.15 Score=46.02 Aligned_cols=98 Identities=8% Similarity=-0.073 Sum_probs=63.1
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHH-cCC-CeeeCCCCCCCchHHHHHHHhcCCCCccEE
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEA-FGM-TDFINPDDEPNKSISELVKEMTHGTGVDYG 272 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga-~~v~~~~~~~~~~~~~~~~~~~~~~g~d~v 272 (332)
...++|||+|+|- |.++-.++|.- .+|++++.+++-.+.+++ +.. ...++... -.+...+.+.. ...||+|
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~-~~~fDVI 143 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLD-IKKYDLI 143 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhcc-CCcCCEE
Confidence 4458999998755 55566777764 389999999998888887 321 00111111 11111233322 2369998
Q ss_pred EEc-CCChHHHHHHHHHhccCCcEEEEEc
Q 043260 273 FEC-TGVASLISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 273 id~-~g~~~~~~~~~~~l~~~~G~~v~~G 300 (332)
|-- +-+++....+.++|+++ |.++.=+
T Consensus 144 IvDs~~~~~fy~~~~~~L~~~-Gi~v~Qs 171 (262)
T PRK00536 144 ICLQEPDIHKIDGLKRMLKED-GVFISVA 171 (262)
T ss_pred EEcCCCChHHHHHHHHhcCCC-cEEEECC
Confidence 754 66666778999999998 9887644
No 483
>PLN02476 O-methyltransferase
Probab=94.58 E-value=0.41 Score=43.65 Aligned_cols=106 Identities=13% Similarity=0.224 Sum_probs=68.2
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcC-CCeEEEEcCCcchHHHHH----HcCCCeeeCCCCCCCchHHHHHHHhc
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQG-AAKIIGIDKNPCRKDKGE----AFGMTDFINPDDEPNKSISELVKEMT 264 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G-~~~Vi~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~~~~~~ 264 (332)
...+..+.++||=+|.+. |..++.+++.++ -.+|+.++.+++..+.++ +.|...-+.... .+..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~l~ 187 (278)
T PLN02476 112 MLVQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKSMI 187 (278)
T ss_pred HHHHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHH
Confidence 445667788999998743 666667777663 237999999998877664 456542222222 33334444432
Q ss_pred ---CCCCccEEEEcCCCh---HHHHHHHHHhccCCcEEEEEc
Q 043260 265 ---HGTGVDYGFECTGVA---SLISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 265 ---~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~G 300 (332)
....||.||--..-. ..+..+++.|+++ |.++.=.
T Consensus 188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DN 228 (278)
T PLN02476 188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDN 228 (278)
T ss_pred hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEec
Confidence 123699988765542 4577889999998 9877543
No 484
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=94.57 E-value=0.23 Score=46.06 Aligned_cols=79 Identities=16% Similarity=0.272 Sum_probs=51.0
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHcC-CCeEEEEcCCcchHHHH-HHcCC--C--ee--eCCCCCCCchHHHHHHHhcC-C
Q 043260 197 GSSVAVFGL-GAVGLGVMDRARIQG-AAKIIGIDKNPCRKDKG-EAFGM--T--DF--INPDDEPNKSISELVKEMTH-G 266 (332)
Q Consensus 197 g~~vlV~G~-g~vG~~~~~la~~~G-~~~Vi~~~~~~~~~~~~-~~lga--~--~v--~~~~~~~~~~~~~~~~~~~~-~ 266 (332)
+++++|+|+ +++|..+++.+...| . +|+++.+++++.+.+ +++.. . .+ .|..+ .++..+.+.+... .
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS--LDSVRQFVQQFRESG 79 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 568999998 999999998888889 7 899998887766533 34431 1 12 23332 2333333333211 1
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
.+.|++|+++|.
T Consensus 80 ~~iD~lI~nAG~ 91 (314)
T TIGR01289 80 RPLDALVCNAAV 91 (314)
T ss_pred CCCCEEEECCCc
Confidence 268999998874
No 485
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=94.57 E-value=0.32 Score=44.12 Aligned_cols=85 Identities=22% Similarity=0.318 Sum_probs=50.5
Q ss_pred EEEEECCChHHHHHHHHHHHc-CCCeEEEEcCCcchHHH-HHHcCCC-eeeCCCCCCCchHHHHHHHhcCCCCccEEEEc
Q 043260 199 SVAVFGLGAVGLGVMDRARIQ-GAAKIIGIDKNPCRKDK-GEAFGMT-DFINPDDEPNKSISELVKEMTHGTGVDYGFEC 275 (332)
Q Consensus 199 ~vlV~G~g~vG~~~~~la~~~-G~~~Vi~~~~~~~~~~~-~~~lga~-~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~ 275 (332)
+|.|+|+|.+|...++..... +. ++..+...+.+.+. ...++.. .++ .++ .++ ...+|+|++|
T Consensus 3 rVgIiG~G~iG~~~~~~l~~~~~~-~l~~v~~~~~~~~~~~~~~~~~~~~~-------~d~----~~l--~~~~DvVve~ 68 (265)
T PRK13303 3 KVAMIGFGAIGAAVLELLEHDPDL-RVDWVIVPEHSIDAVRRALGEAVRVV-------SSV----DAL--PQRPDLVVEC 68 (265)
T ss_pred EEEEECCCHHHHHHHHHHhhCCCc-eEEEEEEcCCCHHHHhhhhccCCeee-------CCH----HHh--ccCCCEEEEC
Confidence 689999999999988877665 45 44443322222222 2223221 111 112 222 2368999999
Q ss_pred CCChHHHHHHHHHhccCCcEEEE
Q 043260 276 TGVASLISEALEATKLGKGKVMA 298 (332)
Q Consensus 276 ~g~~~~~~~~~~~l~~~~G~~v~ 298 (332)
++...+.+.+.++|..+ -.++.
T Consensus 69 t~~~~~~e~~~~aL~aG-k~Vvi 90 (265)
T PRK13303 69 AGHAALKEHVVPILKAG-IDCAV 90 (265)
T ss_pred CCHHHHHHHHHHHHHcC-CCEEE
Confidence 99876777888888765 45543
No 486
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.54 E-value=0.25 Score=43.38 Aligned_cols=80 Identities=23% Similarity=0.277 Sum_probs=48.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcch-HH-H---HHHcCCCe-ee--CCCCCCCchHHHHHHHhcC-
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCR-KD-K---GEAFGMTD-FI--NPDDEPNKSISELVKEMTH- 265 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~-~~-~---~~~lga~~-v~--~~~~~~~~~~~~~~~~~~~- 265 (332)
.++++||+|+ |.+|..++..+...|+ +|+++.++..+ .+ . ++..+... .+ |..+ .+++.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4578999998 9999999999999999 78676665442 22 2 22233332 22 3322 2333333333221
Q ss_pred CCCccEEEEcCCC
Q 043260 266 GTGVDYGFECTGV 278 (332)
Q Consensus 266 ~~g~d~vid~~g~ 278 (332)
-.++|.||.++|.
T Consensus 81 ~~~id~vi~~ag~ 93 (248)
T PRK05557 81 FGGVDILVNNAGI 93 (248)
T ss_pred cCCCCEEEECCCc
Confidence 1258999998874
No 487
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=94.54 E-value=0.51 Score=45.70 Aligned_cols=74 Identities=22% Similarity=0.306 Sum_probs=52.0
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHh---------cCCCC
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEM---------THGTG 268 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~---------~~~~g 268 (332)
.+|.|+|.|-+|...+..+...|. +|+++++++++.+.+.. |...+. + .++.+.+.+. +....
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~~~---e---~~l~~~l~~~~~~g~l~~~~~~~~ 75 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIHIV---E---PDLDMVVKTAVEGGYLRATTTPEP 75 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCCcC---C---CCHHHHHHHHhhcCceeeeccccc
Confidence 579999999999999998888998 99999999999886543 432221 1 2333333221 11225
Q ss_pred ccEEEEcCCCh
Q 043260 269 VDYGFECTGVA 279 (332)
Q Consensus 269 ~d~vid~~g~~ 279 (332)
.|+||-|++++
T Consensus 76 aDvvii~vptp 86 (415)
T PRK11064 76 ADAFLIAVPTP 86 (415)
T ss_pred CCEEEEEcCCC
Confidence 89999999985
No 488
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.53 E-value=0.48 Score=44.23 Aligned_cols=38 Identities=26% Similarity=0.481 Sum_probs=33.8
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHH
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDK 236 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~ 236 (332)
++|.|+|+|.+|...++.+...|. +|++.|.+++.++.
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~ 45 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAA 45 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHH
Confidence 579999999999999999999999 99999999876553
No 489
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.52 E-value=0.28 Score=43.14 Aligned_cols=99 Identities=16% Similarity=0.181 Sum_probs=60.1
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH-HHcCCCee---------eCCCCCCCch-HHHHHH
Q 043260 193 KVEKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG-EAFGMTDF---------INPDDEPNKS-ISELVK 261 (332)
Q Consensus 193 ~~~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v---------~~~~~~~~~~-~~~~~~ 261 (332)
...++.+||+.|+|. |.-++.||. .|+ +|+++|.++...+.+ ++.+.... ..... -. +...+.
T Consensus 34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~---v~~~~~D~~ 107 (218)
T PRK13255 34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGE---ITIYCGDFF 107 (218)
T ss_pred CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCc---eEEEECccc
Confidence 456778999999976 777777765 799 999999999887754 33332110 00000 00 000111
Q ss_pred Hhc--CCCCccEEEEcCCC--------hHHHHHHHHHhccCCcEEEE
Q 043260 262 EMT--HGTGVDYGFECTGV--------ASLISEALEATKLGKGKVMA 298 (332)
Q Consensus 262 ~~~--~~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~ 298 (332)
++. ....||.|+|...- ...+..+.+.|+++ |++++
T Consensus 108 ~l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l 153 (218)
T PRK13255 108 ALTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLL 153 (218)
T ss_pred CCCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEE
Confidence 111 11268999996531 13478889999998 87443
No 490
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=94.51 E-value=0.42 Score=43.18 Aligned_cols=102 Identities=16% Similarity=0.131 Sum_probs=67.0
Q ss_pred HhhCCCCCCEEEEECCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHHcC-------CC--eeeCCCCCCCchHHHH
Q 043260 190 KEFKVEKGSSVAVFGLGAVGLGVMDRARIQGA-AKIIGIDKNPCRKDKGEAFG-------MT--DFINPDDEPNKSISEL 259 (332)
Q Consensus 190 ~~~~~~~g~~vlV~G~g~vG~~~~~la~~~G~-~~Vi~~~~~~~~~~~~~~lg-------a~--~v~~~~~~~~~~~~~~ 259 (332)
+..+++++++||-+|+|. |..+..+++..+. .+|+++|.+++-++.+++.. .+ .++..+
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d---------- 135 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGD---------- 135 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcc----------
Confidence 345678899999999866 6667777777652 38999999998887765421 11 122111
Q ss_pred HHHh-cCCCCccEEEEcCC-----C-hHHHHHHHHHhccCCcEEEEEcCCC
Q 043260 260 VKEM-THGTGVDYGFECTG-----V-ASLISEALEATKLGKGKVMAIGAAN 303 (332)
Q Consensus 260 ~~~~-~~~~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~G~~~ 303 (332)
+.++ .....||.|+-+.+ + ...+.++.+.|+|+ |+++++-...
T Consensus 136 ~~~lp~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~~ 185 (261)
T PLN02233 136 ATDLPFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFNK 185 (261)
T ss_pred cccCCCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECCC
Confidence 1111 12336999986443 2 24678999999998 9998875543
No 491
>PLN02823 spermine synthase
Probab=94.50 E-value=0.33 Score=45.54 Aligned_cols=101 Identities=13% Similarity=0.048 Sum_probs=63.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcCC-C-eee-CCCCC-CCchHHHHHHHhcCCCCccE
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFGM-T-DFI-NPDDE-PNKSISELVKEMTHGTGVDY 271 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~-~v~-~~~~~-~~~~~~~~~~~~~~~~g~d~ 271 (332)
..++|||+|+|. |..+..+++..+..+|++++.+++-.+++++.-. . ..+ +.+-. ...+....+++ . ...+|+
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~-~~~yDv 179 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-R-DEKFDV 179 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-C-CCCccE
Confidence 457899998865 5556677776666789999999999998877421 0 001 00000 11233344533 2 347999
Q ss_pred EEEcCCC------------hHHHH-HHHHHhccCCcEEEEEc
Q 043260 272 GFECTGV------------ASLIS-EALEATKLGKGKVMAIG 300 (332)
Q Consensus 272 vid~~g~------------~~~~~-~~~~~l~~~~G~~v~~G 300 (332)
||--... .+.+. .+.+.|+++ |.++.-.
T Consensus 180 Ii~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q~ 220 (336)
T PLN02823 180 IIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQA 220 (336)
T ss_pred EEecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEec
Confidence 9875322 12455 678899998 9887543
No 492
>PLN00016 RNA-binding protein; Provisional
Probab=94.50 E-value=0.38 Score=45.79 Aligned_cols=98 Identities=14% Similarity=0.178 Sum_probs=61.5
Q ss_pred CCCEEEEE----CC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHH-----------HHHcCCCeeeCCCCCCCchHHHH
Q 043260 196 KGSSVAVF----GL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDK-----------GEAFGMTDFINPDDEPNKSISEL 259 (332)
Q Consensus 196 ~g~~vlV~----G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~-----------~~~lga~~v~~~~~~~~~~~~~~ 259 (332)
...+|||+ |+ |.+|..++..+...|. +|++++++..+... +...|...+. . ++.+
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-~------D~~d- 121 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-G------DPAD- 121 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-e------cHHH-
Confidence 34679999 98 9999999999988998 99999987754221 1122333222 1 1211
Q ss_pred HHHhcCCCCccEEEEcCCCh-HHHHHHHHHhccCC-cEEEEEcCC
Q 043260 260 VKEMTHGTGVDYGFECTGVA-SLISEALEATKLGK-GKVMAIGAA 302 (332)
Q Consensus 260 ~~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~-G~~v~~G~~ 302 (332)
+.+.....++|+||++.+.. .....+++.+...+ .++|.++..
T Consensus 122 ~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 122 VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 22222344799999997753 22345566665441 378877754
No 493
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.49 E-value=0.41 Score=44.68 Aligned_cols=36 Identities=31% Similarity=0.634 Sum_probs=33.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcc
Q 043260 196 KGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPC 232 (332)
Q Consensus 196 ~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~ 232 (332)
.|+++.|+|.|.+|.+.++.++.+|. +|+..+++..
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~ 180 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN 180 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC
Confidence 48999999999999999999999999 9999998864
No 494
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=94.48 E-value=0.58 Score=40.80 Aligned_cols=100 Identities=16% Similarity=0.150 Sum_probs=61.5
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHcCC-CeEEEEcCCcchHHHHHHcCCCeeeCCCCCCCchHHHHHHHhcCCCCccEE
Q 043260 194 VEKGSSVAVFGLGAVGLGVMDRARIQGA-AKIIGIDKNPCRKDKGEAFGMTDFINPDDEPNKSISELVKEMTHGTGVDYG 272 (332)
Q Consensus 194 ~~~g~~vlV~G~g~vG~~~~~la~~~G~-~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~v 272 (332)
++++++||=+|+|+ |..+..+++..+. .+|+++|.++.. ......++..+- ......+.+.+......+|+|
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~-----~~~~v~~i~~D~-~~~~~~~~i~~~~~~~~~D~V 121 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD-----PIVGVDFLQGDF-RDELVLKALLERVGDSKVQVV 121 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc-----CCCCcEEEecCC-CChHHHHHHHHHhCCCCCCEE
Confidence 58899988899866 6666667776653 389999987621 111123333322 112223334343344579999
Q ss_pred EEcC-----CC------------hHHHHHHHHHhccCCcEEEEEcC
Q 043260 273 FECT-----GV------------ASLISEALEATKLGKGKVMAIGA 301 (332)
Q Consensus 273 id~~-----g~------------~~~~~~~~~~l~~~~G~~v~~G~ 301 (332)
+... +. ...+..+.+.|+++ |++++.-.
T Consensus 122 ~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~~~ 166 (209)
T PRK11188 122 MSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVKVF 166 (209)
T ss_pred ecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEEe
Confidence 9754 22 13568889999998 99988533
No 495
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.48 E-value=0.3 Score=44.72 Aligned_cols=40 Identities=18% Similarity=0.304 Sum_probs=35.1
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHH
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGE 238 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~ 238 (332)
++|.|+|+|.+|...++.+...|. +|++.++++++.+.+.
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~-~V~~~d~~~~~~~~~~ 41 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGF-QTTLVDIKQEQLESAQ 41 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHH
Confidence 468999999999999998888998 9999999998877653
No 496
>PRK03612 spermidine synthase; Provisional
Probab=94.47 E-value=0.22 Score=49.67 Aligned_cols=96 Identities=11% Similarity=0.149 Sum_probs=64.1
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHcC-C----------C--eeeCCCCCCCchHHHHHH
Q 043260 195 EKGSSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAFG-M----------T--DFINPDDEPNKSISELVK 261 (332)
Q Consensus 195 ~~g~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~lg-a----------~--~v~~~~~~~~~~~~~~~~ 261 (332)
++.++||++|+|. |..+..+++.-+..+|++++.+++-.+.+++.- . . +++. .+..+.++
T Consensus 296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~------~Da~~~l~ 368 (521)
T PRK03612 296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVN------DDAFNWLR 368 (521)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEE------ChHHHHHH
Confidence 4568899998864 666666776544369999999999888887721 0 1 1121 23334444
Q ss_pred HhcCCCCccEEEEcCCCh-----------HHHHHHHHHhccCCcEEEEEc
Q 043260 262 EMTHGTGVDYGFECTGVA-----------SLISEALEATKLGKGKVMAIG 300 (332)
Q Consensus 262 ~~~~~~g~d~vid~~g~~-----------~~~~~~~~~l~~~~G~~v~~G 300 (332)
+. . ..||+|+-....+ +.++.+.+.|+++ |.++.-.
T Consensus 369 ~~-~-~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~ 415 (521)
T PRK03612 369 KL-A-EKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS 415 (521)
T ss_pred hC-C-CCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence 32 2 3799999865432 2467889999998 9988654
No 497
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.46 E-value=0.15 Score=45.04 Aligned_cols=82 Identities=16% Similarity=0.178 Sum_probs=49.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEE-EcCCcchHHH----HHHcCCCe-eeCCCCCCCchHHHHHHHhcCC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIG-IDKNPCRKDK----GEAFGMTD-FINPDDEPNKSISELVKEMTHG-T 267 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~-~~~~~~~~~~----~~~lga~~-v~~~~~~~~~~~~~~~~~~~~~-~ 267 (332)
+++++||+|+ |.+|..++..+...|. +|++ ..++.++.+. .++.+... .+..+-.+.++....+.+.... .
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999998 9999999999999998 7665 4566555432 23344432 2211111223333333332111 1
Q ss_pred CccEEEEcCCC
Q 043260 268 GVDYGFECTGV 278 (332)
Q Consensus 268 g~d~vid~~g~ 278 (332)
++|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 58999998874
No 498
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=94.44 E-value=0.21 Score=46.26 Aligned_cols=100 Identities=10% Similarity=0.099 Sum_probs=59.4
Q ss_pred CEEEEECCChHHHHHHHHHHHcCCCeEEEEcCCcchHHHHHHc-CCCeeeCCCCCCCchHHHHHHHhcCCCCccEEEEcC
Q 043260 198 SSVAVFGLGAVGLGVMDRARIQGAAKIIGIDKNPCRKDKGEAF-GMTDFINPDDEPNKSISELVKEMTHGTGVDYGFECT 276 (332)
Q Consensus 198 ~~vlV~G~g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga~~v~~~~~~~~~~~~~~~~~~~~~~g~d~vid~~ 276 (332)
.+|+|+|+|++|....-.+...|. +|.++++..++.+..++- |. .+................+. ...+|+||-|+
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl-~i~~~g~~~~~~~~~~~~~~--~~~~D~viv~v 78 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGL-TLVEQGQASLYAIPAETADA--AEPIHRLLLAC 78 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCe-EEeeCCcceeeccCCCCccc--ccccCEEEEEC
Confidence 469999999999988877788898 899999987777766543 43 22111110000000000011 12589999988
Q ss_pred CChH---HHHHHHHHhccCCcEEEEEcCC
Q 043260 277 GVAS---LISEALEATKLGKGKVMAIGAA 302 (332)
Q Consensus 277 g~~~---~~~~~~~~l~~~~G~~v~~G~~ 302 (332)
=+.+ .+.++...+.++ ..++.+.+-
T Consensus 79 K~~~~~~al~~l~~~l~~~-t~vv~lQNG 106 (305)
T PRK05708 79 KAYDAEPAVASLAHRLAPG-AELLLLQNG 106 (305)
T ss_pred CHHhHHHHHHHHHhhCCCC-CEEEEEeCC
Confidence 7643 333444455665 777766543
No 499
>PRK05855 short chain dehydrogenase; Validated
Probab=94.40 E-value=0.18 Score=50.38 Aligned_cols=80 Identities=16% Similarity=0.236 Sum_probs=52.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCC-ee--eCCCCCCCchHHHHHHHhcC-C
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMT-DF--INPDDEPNKSISELVKEMTH-G 266 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~~~~~~~-~ 266 (332)
.+.++||+|+ |++|..+++.+...|. +|++++++.++.+.+ ++.|.. .+ .|..+ .++..+.+.+... .
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD--ADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 4578999998 9999999999989999 899999988776533 233432 22 23322 2333333333211 1
Q ss_pred CCccEEEEcCCC
Q 043260 267 TGVDYGFECTGV 278 (332)
Q Consensus 267 ~g~d~vid~~g~ 278 (332)
..+|++|+++|.
T Consensus 391 g~id~lv~~Ag~ 402 (582)
T PRK05855 391 GVPDIVVNNAGI 402 (582)
T ss_pred CCCcEEEECCcc
Confidence 258999999885
No 500
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.39 E-value=0.25 Score=44.63 Aligned_cols=82 Identities=12% Similarity=0.035 Sum_probs=50.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHcCCCeEEEEcCCcchHHHH----HHcCCCe-eeCCCCCCCchHHHHHHHhcC-CCC
Q 043260 196 KGSSVAVFGL-GAVGLGVMDRARIQGAAKIIGIDKNPCRKDKG----EAFGMTD-FINPDDEPNKSISELVKEMTH-GTG 268 (332)
Q Consensus 196 ~g~~vlV~G~-g~vG~~~~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v~~~~~~~~~~~~~~~~~~~~-~~g 268 (332)
...+++|+|+ |.+|..+++.+...|+ +|+++.++.++.+.. +..+... ++..+-...+++.+.+.+... -.+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3468999998 9999999998888999 898888877655422 2334432 221221112333333332211 125
Q ss_pred ccEEEEcCCC
Q 043260 269 VDYGFECTGV 278 (332)
Q Consensus 269 ~d~vid~~g~ 278 (332)
.|.+|.++|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999998875
Done!