RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 043263
(286 letters)
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 133 bits (336), Expect = 5e-39
Identities = 63/196 (32%), Positives = 117/196 (59%), Gaps = 5/196 (2%)
Query: 93 LIIVISGPSGVGKDTVIKKLRES--RDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQ 150
+ ++S PSG GK ++I+ L ++ V+ T+R RPGEV+G+ YFFV+ +EF +
Sbjct: 3 TLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKE 62
Query: 151 MVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFL 210
M+ ++ LE+A V+G+Y G ++ I + +A G D+ L +D QGA+ +R+ A +F+
Sbjct: 63 MISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQK-MPHARSIFI 121
Query: 211 AAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKLDSAVKLVES 270
S++ L RL R ++ E + R+A A E+ H +DY++VN + D+A+ +++
Sbjct: 122 LPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDD--FDTALTDLKT 179
Query: 271 VIDAEKAKVRQRSAVI 286
+I AE+ ++ ++
Sbjct: 180 IIRAERLRMSRQKQRH 195
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 120 bits (300), Expect = 6e-34
Identities = 75/185 (40%), Positives = 110/185 (59%), Gaps = 5/185 (2%)
Query: 95 IVISGPSGVGKDTVIKKLRESR-DSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVD 153
IVISGPSG GK T++KKL DS F V++T+R R GEVNGKDY FVS +EF M+
Sbjct: 4 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIK 63
Query: 154 KNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAE 213
NE +E+A G+Y G +++ G +L +D+QG ++++ I +A F+F+A
Sbjct: 64 NNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPP 123
Query: 214 SEMALVERLVERKTENREELLVRIATAREEVQHVKN--FDYVVVNAEGKLDSAVKLVESV 271
S L +RL R TE E + R++ A+ E+ + + D V+VN + LD A K ++
Sbjct: 124 SVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETGAHDKVIVNDD--LDKAYKELKDF 181
Query: 272 IDAEK 276
I AEK
Sbjct: 182 IFAEK 186
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 114 bits (285), Expect = 1e-31
Identities = 66/190 (34%), Positives = 106/190 (55%), Gaps = 7/190 (3%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDS-LHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVD 153
+V+SGPSG GK T++KKL + S F V+ T+R RPGE +GKDY+FV++E + +
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIA 62
Query: 154 KNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAE 213
+ +E+A G+ G K+ +R A VL VD+QG R++++ +++F+
Sbjct: 63 AGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKT-DLCPIYIFVQPP 121
Query: 214 SEMALVERLVERKTENREELLVRIATAREEVQHVKN---FDYVVVNAEGKLDSAVKLVES 270
S L +RL R TE E L R+A AR +++ K FD V++N + LD A ++
Sbjct: 122 SLDVLEQRLRLRNTETEESLAKRLAAARTDMESSKEPGLFDLVIINDD--LDKAYATLKQ 179
Query: 271 VIDAEKAKVR 280
+ E K +
Sbjct: 180 ALSEEIKKAQ 189
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 110 bits (274), Expect = 4e-30
Identities = 75/182 (41%), Positives = 110/182 (60%), Gaps = 5/182 (2%)
Query: 93 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMV 152
++V+SGPS VGK TV++ LRE +LHF V+AT+R RPGEV+G DY F+ F Q++
Sbjct: 3 RVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLI 62
Query: 153 DKNELLEYALVYGDYK--GIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFL 210
D+ ELLE+A ++G G + +R A G +++ VD+ GAR +++ AV VFL
Sbjct: 63 DQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKT-MPEAVTVFL 121
Query: 211 AAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKLDSAVKLVES 270
A S L RL+ R TE + + R+ TAR E+ +FD VVVN L+SA + S
Sbjct: 122 APPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRR--LESACAELVS 179
Query: 271 VI 272
++
Sbjct: 180 LL 181
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 102 bits (255), Expect = 2e-27
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 15/183 (8%)
Query: 94 IIVISGPSGVGKDTVIKKLRESR-DSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMV 152
+V+ G GVG+ + L D + + T+RP + E NGK+Y+FVS ++ +Q +
Sbjct: 5 TLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMMQDI 64
Query: 153 DKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAA 212
NE LEY G + IR+ +G + A + R + VF+AA
Sbjct: 65 SNNEYLEYGSHEDAMYGTKLETIRKIHEQGLI-AILDVEPQALKVLRTAEFAPFVVFIAA 123
Query: 213 ESEMALVERLVERKTENREELLVRIATAREEVQ--HVKNFDYVVVNAEGKLDSAVKLVES 270
+ + +E L R+ + +Q + FD ++N E +D ++ +E
Sbjct: 124 PTITPGLN---------EDESLQRLQKESDILQRTYAHYFDLTIINNE--IDETIRHLEE 172
Query: 271 VID 273
++
Sbjct: 173 AVE 175
>d1kjwa2 c.37.1.1 (A:526-724) Guanylate kinase-like domain of Psd-95
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 199
Score = 95.7 bits (237), Expect = 2e-24
Identities = 40/186 (21%), Positives = 70/186 (37%), Gaps = 10/186 (5%)
Query: 95 IVISGPSGVGKDTVIKKL-RESRDSLHFVVTATSRPMRPGEVNGKDYFF-VSKEEFLQMV 152
I+I GP KD L E D V T+RP R E++G+DY F S+E+ + +
Sbjct: 12 IIILGP---TKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDI 68
Query: 153 DKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAA 212
++ +E G + +RE +G +L V R + + +F+
Sbjct: 69 QAHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRR-LQAAHLHPIAIFIRP 127
Query: 213 ESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKLDSAVKLVESVI 272
S ++E E + R + E + + F +V + V+ VI
Sbjct: 128 RSLENVLEINKRITEEQARKAFDRA--TKLEQEFTECFSAIVEGDS--FEEIYHKVKRVI 183
Query: 273 DAEKAK 278
+
Sbjct: 184 EDLSGP 189
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 63.9 bits (154), Expect = 5e-13
Identities = 27/184 (14%), Positives = 62/184 (33%), Gaps = 16/184 (8%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVD 153
+ +I+GP+GVGK T K+L D+ ++ M G + + + L +
Sbjct: 4 LYIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVG--GYRPPWESDELLALTWKN 61
Query: 154 KNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAE 213
+L L+ + + + ++ + D + +
Sbjct: 62 ITDLTVNFLLAQNDVVLDYIAFPDEAEALAQT-----------VQAKVDDVEIRFIILWT 110
Query: 214 SEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGK-LDSAVKLVESVI 272
+ L+ R RK + E++ R EE + + N + +V+++
Sbjct: 111 NREELLRRDALRKKD--EQMGERCLELVEEFESKGIDERYFYNTSHLQPTNLNDIVKNLK 168
Query: 273 DAEK 276
+
Sbjct: 169 TNPR 172
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 59.2 bits (142), Expect = 2e-11
Identities = 22/190 (11%), Positives = 58/190 (30%), Gaps = 24/190 (12%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVD 153
I+++SG G GK T+ + L G ++ +
Sbjct: 6 ILLLSGHPGSGKSTIAEALANL--------------------PGVPKVHFHSDDLWGYIK 45
Query: 154 KNELLEYALVYGDYKG----IPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVF 209
+ + I Y +GY ++L ++ +
Sbjct: 46 HGRIDPWLPQSHQQNRMIMQIAADVAGRYAKEGYFVILDGVVRPDWLPAFTALARPLHYI 105
Query: 210 LAAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKLDSAVKLVE 269
+ + +ER ++R ++ + LV + +V+ + D A++
Sbjct: 106 VLRTTAAEAIERCLDRGGDSLSDPLVVADLHSQFADLGAFEHHVLPVSGKDTDQALQSAI 165
Query: 270 SVIDAEKAKV 279
+ + + + ++
Sbjct: 166 NALQSGRFRI 175
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 47.3 bits (111), Expect = 3e-07
Identities = 23/178 (12%), Positives = 44/178 (24%), Gaps = 13/178 (7%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVD 153
+I+++G S GK +++ L+ S + S E ++
Sbjct: 5 MIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDS------LIEAMPLKMQSAEGGIEFDA 58
Query: 154 KNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRR---ILGDSAVFVFL 210
+ + + A I+ V + GA R +GD V
Sbjct: 59 DGGVSIGPEFRALEGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWRSFVGDLDVLWVG 118
Query: 211 AAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKLDSAVKLV 268
R R + V +D V + +
Sbjct: 119 VRCDGAVAEGRETARGDRVAGMAAKQ----AYVVHEGVEYDVEVDTTHKESIECAWAI 172
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 47.2 bits (111), Expect = 3e-07
Identities = 34/190 (17%), Positives = 65/190 (34%), Gaps = 11/190 (5%)
Query: 91 NPLIIVISGPSGVGKDTVIKKLRE-------SRDSLHFVVTATSRPMRPGEVNGKDYFFV 143
+P+II I+G G GK TV LR ++ +
Sbjct: 2 HPIIIGITGNIGSGKSTVAALLRSWGYPVLDLDALAARARENKEEELKRLFPEAVVGGRL 61
Query: 144 SKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGD 203
+ ++V + AL + + + + E +V ++ +
Sbjct: 62 DRRALARLVFSDPERLKALEAVVHPEVRRLLMEELSRLEAPLVF---LEIPLLFEKGWEG 118
Query: 204 SAVFVFLAAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKLDS 263
L A V R++ R +REE+L R E + K +V+ N G L+
Sbjct: 119 RLHGTLLVAAPLEERVRRVMARSGLSREEVLARERAQMPEEEKRKRATWVLEN-TGSLED 177
Query: 264 AVKLVESVID 273
+ +++V+
Sbjct: 178 LERALKAVLA 187
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 46.5 bits (109), Expect = 6e-07
Identities = 34/195 (17%), Positives = 62/195 (31%), Gaps = 13/195 (6%)
Query: 92 PLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQM 151
PL++ + G G GK T ++ E H R R + + ++
Sbjct: 1 PLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKI 60
Query: 152 VDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLA 211
V + D Q +++ G+ +T+ FV
Sbjct: 61 VPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKA--DVSFVLFF 118
Query: 212 AESEMALVERLVERK------TENREELLVRIATAREEVQHVKNF-----DYVVVNAEGK 260
+ +ER +ER +NRE L RI T + + + + ++A
Sbjct: 119 DCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGKVKKIDASKS 178
Query: 261 LDSAVKLVESVIDAE 275
+D V + D E
Sbjct: 179 VDEVFDEVVQIFDKE 193
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 46.1 bits (108), Expect = 8e-07
Identities = 25/196 (12%), Positives = 60/196 (30%), Gaps = 19/196 (9%)
Query: 90 PNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFL 149
P ++ + G G GK T + +H ++A + + KD ++
Sbjct: 4 SKPNVVFVLGGPGSGKGTQCANIVRDFGWVH--LSAGDLLRQEQQSGSKDGEMIATMIKN 61
Query: 150 QMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVF 209
+ + + L K + + + + + FV
Sbjct: 62 GEIVPSIVTVKLLKNAIDANQGKNFLVDGFPRNEENNNSWEENMKDF------VDTKFVL 115
Query: 210 LAAESEMALVERLVERKTENR------EELLVRIATAREEVQHVKNF-----DYVVVNAE 258
E + +RL++R + E + R T + + V + ++ A
Sbjct: 116 FFDCPEEVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKVKIIPAN 175
Query: 259 GKLDSAVKLVESVIDA 274
++ VE++ +
Sbjct: 176 RDVNEVYNDVENLFKS 191
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 46.1 bits (108), Expect = 8e-07
Identities = 21/187 (11%), Positives = 50/187 (26%), Gaps = 8/187 (4%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHF---VVTATSRPMRPGEVNGKDYFFVSKEEFLQ 150
++V++G GVG T + ++ +V+ S + +
Sbjct: 3 VVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAKEENLVSDRDQMRKMDP 62
Query: 151 MVDKNELLEYALVYGDYKGIPKKQIREYM-----AKGYDIVLRVDIQGARTLRRILGDSA 205
K + + + + + I+ ++
Sbjct: 63 ETQKRIQKMAGRKIAEMAKESPVAVDTHSTVSTPKGYLPGLPSWVLNELNPDLIIVVETT 122
Query: 206 VFVFLAAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKLDSAV 265
L R ++ + + + A +V N G LD AV
Sbjct: 123 GDEILMRRMSDETRVRDLDTASTIEQHQFMNRCAAMSYGVLTGATVKIVQNRNGLLDQAV 182
Query: 266 KLVESVI 272
+ + +V+
Sbjct: 183 EELTNVL 189
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 46.3 bits (108), Expect = 9e-07
Identities = 24/180 (13%), Positives = 49/180 (27%), Gaps = 13/180 (7%)
Query: 88 PPPNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEE 147
L++ I G S GK T+ +L ++ V E + + +
Sbjct: 18 KTAGRLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHTGNEEWF 77
Query: 148 FLQMVDKNELLEYALVYGDYKG---------IPKKQIREYMAKGYDIVLRVDIQGARTLR 198
+ + ++ K + + I+G R
Sbjct: 78 EYYYLQWDVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDMIMIEGVFLQR 137
Query: 199 RILGDSAVFVFLAAESEMALVERLVERKTENREELLVRIATAR----EEVQHVKNFDYVV 254
+ FV R ++ +N ++ + R A E + +K D V
Sbjct: 138 KEWRPFFDFVVYLDCPREIRFARENDQVKQNIQKFINRYWKAEDYYLETEEPIKRADVVF 197
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 45.8 bits (107), Expect = 1e-06
Identities = 29/182 (15%), Positives = 57/182 (31%), Gaps = 17/182 (9%)
Query: 91 NPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQ 150
+ I V+ G SG GK V ++ + F+ P R E +
Sbjct: 5 DHHIYVLMGVSGSGKSAVASEV-AHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPW 63
Query: 151 MVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFL 210
+ N+ I ++++ L R + F++L
Sbjct: 64 LQALNDAAFAMQRTNKVSLIVCSALKKHYRD---------------LLREGNPNLSFIYL 108
Query: 211 AAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKLDSAVKLVES 270
+ ++ + RL RK + ++ + D +VV+ + L+ V
Sbjct: 109 KGDFDV-IESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPLEGVVASTIE 167
Query: 271 VI 272
VI
Sbjct: 168 VI 169
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 43.1 bits (100), Expect = 9e-06
Identities = 34/200 (17%), Positives = 65/200 (32%), Gaps = 18/200 (9%)
Query: 85 PVCPPPNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVS 144
P P +I + G G GK T +KL + +H R +
Sbjct: 1 PAFSPDQVSVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQG------RAGSQY 54
Query: 145 KEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDS 204
E + + +++ + + ++ K + A + R + +S
Sbjct: 55 GELIKNCIKEGQIVPQEITLALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDIVES 114
Query: 205 AVFVFLAAESEMALVERLVERKTENR------EELLVRIATAREEVQHVKNF-----DYV 253
F+ E ++ERL+ER + E + R T +E V + V
Sbjct: 115 K-FILFFDCPEDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFETKSKVV 173
Query: 254 VVNAEGKLDSAVKLVESVID 273
V + ++ K V+ I
Sbjct: 174 RVRCDRSVEDVYKDVQDAIR 193
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 41.8 bits (97), Expect = 2e-05
Identities = 23/187 (12%), Positives = 62/187 (33%), Gaps = 14/187 (7%)
Query: 91 NPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQ 150
+PL ++ISG GK T + ++ H R + + +
Sbjct: 2 DPLKVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIA-------AGSENGKRAKE 54
Query: 151 MVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFL 210
++K +L+ +V K ++ + D R Q + +
Sbjct: 55 FMEKGQLVPDEIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETLEIRPDTFILLD 114
Query: 211 AAESEMALVERLVERKTENREELLVRIATAREEVQHVKNF---DYVVVNAEGKLDSAVKL 267
+ + + E++ +R+ T + ++ + + V V + +D+
Sbjct: 115 VPDELL----VERVVFDDTEEKVKLRLETYYQNIESLLSTYENIIVKVQGDATVDAVFAK 170
Query: 268 VESVIDA 274
++ ++ +
Sbjct: 171 IDELLGS 177
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 40.5 bits (93), Expect = 5e-05
Identities = 22/143 (15%), Positives = 43/143 (30%), Gaps = 9/143 (6%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVD 153
II+ G G GK T ++ + + R +Y + K+E +
Sbjct: 4 IILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTGM 63
Query: 154 KNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAE 213
+ + + L GD + + + T + G
Sbjct: 64 QFDTAKSILYGGDSV--------KGVIISDTNLNPERRLAWETFAKEYGWKVEHKVFDVP 115
Query: 214 SEMALVERLVERKTENREELLVR 236
LV+R +R T+ ++R
Sbjct: 116 WTE-LVKRNSKRGTKAVPIDVLR 137
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 40.4 bits (93), Expect = 7e-05
Identities = 25/191 (13%), Positives = 56/191 (29%), Gaps = 12/191 (6%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVD 153
I +++G GVGK TV+ K++E D+ + K + ++E ++
Sbjct: 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLSV 62
Query: 154 KNELLEYALVYGDYKGIPKKQ------------IREYMAKGYDIVLRVDIQGARTLRRIL 201
+ + + IR + V + ++ +L
Sbjct: 63 EKQKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIFLL 122
Query: 202 GDSAVFVFLAAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKL 261
+ + + ++ E + A + V+VN EG
Sbjct: 123 EADPKIILSRQKRDTTRNRNDYSDESVILETINFARYAATASAVLAGSTVKVIVNVEGDP 182
Query: 262 DSAVKLVESVI 272
A + +
Sbjct: 183 SIAANEIIRSM 193
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 39.6 bits (91), Expect = 1e-04
Identities = 35/190 (18%), Positives = 61/190 (32%), Gaps = 30/190 (15%)
Query: 90 PNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFL 149
P + I+I+G G GK ++ + + D + + +Y +
Sbjct: 3 PKGINILITGTPGTGKTSMAEMIAAELDGFQHL---EVGKLVKENHFYTEYDTELDTHII 59
Query: 150 QMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVF 209
+ D++ LL+ + M + V+ L V V
Sbjct: 60 EEKDEDRLLD--------------FMEPIMVSRGNHVVDYHS---SELFPERWFHMVVVL 102
Query: 210 LAAESEMALVERLVERKT------ENREELLVRIATAREEVQHVKNFDYVVVNAEGKLDS 263
S L ERL +R+ EN E + I EE + D V+V L+
Sbjct: 103 HT--STEVLFERLTKRQYSEAKRAENMEAEIQCICE--EEARDAYEDDIVLVRENDTLEQ 158
Query: 264 AVKLVESVID 273
VE + +
Sbjct: 159 MAATVEEIRE 168
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 39.5 bits (91), Expect = 1e-04
Identities = 33/186 (17%), Positives = 62/186 (33%), Gaps = 11/186 (5%)
Query: 93 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRP-MRPGEVNGKDYF-FVSKEEFLQ 150
+ +++ GP G GK T KL E R + G G + ++ + +
Sbjct: 1 MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVP 60
Query: 151 MVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFL 210
NEL++ L D I + + + + R I AV F
Sbjct: 61 SDLTNELVDDRLNNPDAA---NGFILDGYPRSVEQAKALHEMLERRGTDI---DAVLEFR 114
Query: 211 AAESEMALVERLVERKTENREELLVRIATAREEVQHVKNF---DYVVVNAEGKLDSAVKL 267
+E + + R + + +L R+ R+E + + V+A G +D
Sbjct: 115 VSEEVLLERLKGRGRADDTDDVILNRMKVYRDETAPLLEYYRDQLKTVDAVGTMDEVFAR 174
Query: 268 VESVID 273
+
Sbjct: 175 ALRALG 180
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 38.8 bits (89), Expect = 3e-04
Identities = 37/198 (18%), Positives = 68/198 (34%), Gaps = 22/198 (11%)
Query: 91 NPLIIVISGPSGVGKDTVIKKLRESRDSLHFVV-TATSRPMRPGEVNGKDYFFVSKEEFL 149
II + G G GK T +K+ + H + G GK + ++ L
Sbjct: 7 KSKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQL 66
Query: 150 QMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVF 209
++ + + I Y +++ R +G + ++
Sbjct: 67 VPLETVLDMLRDAMVAKVDTSKGFLIDGYP---------REVKQGEEFERKIGQPTLLLY 117
Query: 210 LAAESEMALVERLVE------RKTENREELLVRIATAREEVQHVKNF-----DYVVVNAE 258
+ A E +RL++ R +N E + R+ T + + V F VNAE
Sbjct: 118 VDAGPETM-TKRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAE 176
Query: 259 GKLDSAVKLVESVIDAEK 276
G +D V + +D K
Sbjct: 177 GSVDDVFSQVCTHLDTLK 194
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 38.3 bits (88), Expect = 3e-04
Identities = 25/193 (12%), Positives = 51/193 (26%), Gaps = 23/193 (11%)
Query: 93 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMV 152
+ IV+ G G GK T ++ E +T R G + +K +
Sbjct: 1 MNIVLMGLPGAGKGTQADRIVE---KYGTPHISTGDMFRAAIQEGTELGVKAKS----FM 53
Query: 153 DKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGD-----SAVF 207
D+ L D I + R + + L L
Sbjct: 54 DQGAL------VPDEVTIGIVRERLSKSDCDNGFLLDGFPRTVPQAEALDQLLADMGRKI 107
Query: 208 VFLAAESEMALVERLVERKTENREELLVRIATAREEVQHVKNF-----DYVVVNAEGKLD 262
+ +N + + R+ + + F V +N + +
Sbjct: 108 EHVLNIQVEKEELIARLTADDNPDTVTNRLEVNMNQTAPLLAFYDSKEVLVNINGQKDIK 167
Query: 263 SAVKLVESVIDAE 275
K ++ ++
Sbjct: 168 DVFKDLDVILQGN 180
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 38.8 bits (89), Expect = 4e-04
Identities = 20/199 (10%), Positives = 51/199 (25%), Gaps = 9/199 (4%)
Query: 93 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRP---------MRPGEVNGKDYFFV 143
+IV+ G GK T +KL E+ + P + D
Sbjct: 4 ALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDH 63
Query: 144 SKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGD 203
S ++ + + + + L
Sbjct: 64 SVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPK 123
Query: 204 SAVFVFLAAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKLDS 263
+ +FL + A + R ++ ++ +V+A +++
Sbjct: 124 PDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSIEA 183
Query: 264 AVKLVESVIDAEKAKVRQR 282
+ + + + A ++
Sbjct: 184 VHEDIRVLSEDAIATATEK 202
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 38.5 bits (88), Expect = 4e-04
Identities = 7/40 (17%), Positives = 16/40 (40%)
Query: 92 PLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMR 131
P ++I G G GK T + + ++ + + +
Sbjct: 9 PFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRN 48
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 38.4 bits (88), Expect = 4e-04
Identities = 17/91 (18%), Positives = 32/91 (35%)
Query: 93 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMV 152
IVI G G GK T + E+ + L +R ++ K + + +
Sbjct: 3 KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVGDE 62
Query: 153 DKNELLEYALVYGDYKGIPKKQIREYMAKGY 183
+ E + Y + + I+ +A G
Sbjct: 63 VITDKAEVLMFYAARVQLVETVIKPALANGT 93
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 38.0 bits (87), Expect = 5e-04
Identities = 25/189 (13%), Positives = 62/189 (32%), Gaps = 17/189 (8%)
Query: 93 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMV 152
+ +V+ G G GK T +K+ + H +T R G +K+ +
Sbjct: 1 MNLVLMGLPGAGKGTQAEKIVAAYGIPHI---STGDMFRAAMKEGTPLGLQAKQ----YM 53
Query: 153 DKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAA 212
D+ +L+ + ++ ++ G+ + +
Sbjct: 54 DRGDLVP---DEVTIGIVRERLSKDDCQNGFLLDGFPRTVAQAEALETMLADIGRKLDYV 110
Query: 213 ESEMALVERLVERKTENREELLV--RIATAREEVQHVKNF-----DYVVVNAEGKLDSAV 265
+ L+ER T + E V R+ ++++ + +F +N E ++
Sbjct: 111 IHIDVRQDVLMERLTADDNEATVANRLEVNMKQMKPLVDFYEQKGYLRNINGEQDMEKVF 170
Query: 266 KLVESVIDA 274
+ ++
Sbjct: 171 ADIRELLGG 179
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 37.7 bits (86), Expect = 7e-04
Identities = 17/87 (19%), Positives = 29/87 (33%), Gaps = 1/87 (1%)
Query: 93 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMV 152
++I I G G GK T+++KL + + V + P R G+ D + +
Sbjct: 1 MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFP-RYGQSVAADIAAEALHGEHGDL 59
Query: 153 DKNELLEYALVYGDYKGIPKKQIREYM 179
+ L D G
Sbjct: 60 ASSVYAMATLFALDRAGAVHTIQGLCR 86
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 37.6 bits (86), Expect = 8e-04
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 92 PLIIVISGPSGVGKDTVIKKLRE 114
P +I +SG + GK +V K+ +
Sbjct: 2 PFLIGVSGGTASGKSSVCAKIVQ 24
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 37.0 bits (85), Expect = 0.001
Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 10/97 (10%)
Query: 92 PLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQM 151
P +I++ G +GVGK T I KL + F + G + + E+
Sbjct: 9 PFVILMVGVNGVGKTTTIGKL-----ARQF----EQQGKSVMLAAGDTFRAAAVEQLQVW 59
Query: 152 VDKNELLEYALVYGDY-KGIPKKQIREYMAKGYDIVL 187
+N + A G + I+ A+ D+++
Sbjct: 60 GQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLI 96
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 36.8 bits (84), Expect = 0.001
Identities = 27/188 (14%), Positives = 62/188 (32%), Gaps = 18/188 (9%)
Query: 93 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMV 152
+ I++ G GK T + + E +T +R +G + +K+ ++
Sbjct: 1 MRIILLGAPVAGKGTQAQFIMEKYGIPQI---STGDMLRAAVKSGSELGKQAKD----IM 53
Query: 153 DKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAA 212
D +L+ LV K +E G+ + + G + +V
Sbjct: 54 DAGKLVTDELVIALVKERI---AQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFD 110
Query: 213 ESEMALVERLVERKTENR--------EELLVRIATAREEVQHVKNFDYVVVNAEGKLDSA 264
+ +V+R+V+ E ++ + + N Y V+ +
Sbjct: 111 VPDELIVDRIVKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEV 170
Query: 265 VKLVESVI 272
+E ++
Sbjct: 171 RADLEKIL 178
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 36.1 bits (82), Expect = 0.003
Identities = 21/139 (15%), Positives = 40/139 (28%), Gaps = 14/139 (10%)
Query: 93 LIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMR---PGEVNGKDYFFVS-KEEF 148
+I+V G +G GK T+ + + + V P E + FV+ +E
Sbjct: 1 MIVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIM 60
Query: 149 LQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIV----------LRVDIQGARTLR 198
+ N + + K + K D V G R +
Sbjct: 61 REGYGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDTPGQMETFLFHEFGVRLME 120
Query: 199 RILGDSAVFVFLAAESEMA 217
+ V++ +
Sbjct: 121 NLPYPLVVYISDPEILKKP 139
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 35.2 bits (80), Expect = 0.003
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 88 PPPNPLIIVISGPSGVGKDTVIKKLRESRDSLHF 121
PNP ++V G G GK T I++ S +H
Sbjct: 10 LSPNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHV 43
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 35.8 bits (81), Expect = 0.003
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 5/66 (7%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVD 153
I I G GK T + L++ + V +R N + +E + +
Sbjct: 4 KISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARW-----CNVQSTQDEFEELTMSQKN 58
Query: 154 KNELLE 159
+L+
Sbjct: 59 GGNVLQ 64
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 35.3 bits (80), Expect = 0.003
Identities = 23/150 (15%), Positives = 42/150 (28%), Gaps = 6/150 (4%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDK 154
I+++G GVGK T+ K+L + +G D + V
Sbjct: 7 ILLTGTPGVGKTTLGKELASKSG--LKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVD 64
Query: 155 NELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 214
+ E VLR D R+ L
Sbjct: 65 ELDNQMREGGVIVDYHGCDFFPE-RWFHIVFVLRTDTN--VLYERLETRGYNEKKLTDNI 121
Query: 215 EMALV-ERLVERKTENREELLVRIATAREE 243
+ + E +EE++ ++ + + E
Sbjct: 122 QCEIFQVLYEEATASYKEEIVHQLPSNKPE 151
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 35.3 bits (81), Expect = 0.006
Identities = 7/53 (13%), Positives = 15/53 (28%)
Query: 88 PPPNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDY 140
+ I + G G+GK T + + + + + D
Sbjct: 2 HMVTIVRIYLDGVYGIGKSTTGRVMASAASGGSPTLYFPEPMAYWRTLFETDV 54
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 34.9 bits (79), Expect = 0.006
Identities = 18/138 (13%), Positives = 34/138 (24%)
Query: 92 PLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQM 151
P +IV+ G GK + KKL + + + ++ F +
Sbjct: 2 PTLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEE 61
Query: 152 VDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLA 211
K D + ++ R G FV
Sbjct: 62 GLKIRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRAMIFNFGEQNGYKTFFVESI 121
Query: 212 AESEMALVERLVERKTEN 229
+ +V+ K +
Sbjct: 122 CVDPEVIAANIVQVKLGS 139
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 35.0 bits (79), Expect = 0.007
Identities = 10/47 (21%), Positives = 16/47 (34%)
Query: 92 PLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGK 138
P + I G VGK T +K L ++ H + +
Sbjct: 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGNQ 48
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 34.6 bits (78), Expect = 0.009
Identities = 18/204 (8%), Positives = 47/204 (23%), Gaps = 9/204 (4%)
Query: 88 PPPNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTAT----SRPMRPGEVNGKDYFFV 143
+P ++ G G GK ++ + E V+ P V + V
Sbjct: 28 AVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVV 87
Query: 144 SKEEFLQMVDKNELLEYALVYG-----DYKGIPKKQIREYMAKGYDIVLRVDIQGARTLR 198
++ G + G + + +
Sbjct: 88 KHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPK 147
Query: 199 RILGDSAVFVFLAAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAE 258
+ + ++ + R ++ + + + + +
Sbjct: 148 INSYLGTIERYETMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDIRLYNREG 207
Query: 259 GKLDSAVKLVESVIDAEKAKVRQR 282
KL S+++ K R
Sbjct: 208 VKLYSSLETPSISPKETLEKELNR 231
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 34.4 bits (78), Expect = 0.009
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 82 DSNPVCPPPN-PLIIVISGPSGVGKDTVIKKL 112
D P P P +I++ G G GK T KL
Sbjct: 1 DKEPKVIPDKIPYVIMLVGVQGTGKATTAGKL 32
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 33.9 bits (77), Expect = 0.013
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 12/102 (11%)
Query: 88 PPPNPLIIVISGPSGVGKDTVIKKL-RESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKE 146
PP P +I++ G +G GK T KL + D VV A + R + E
Sbjct: 7 PPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAI----------E 56
Query: 147 EFLQMVDKNELLEYALVYG-DYKGIPKKQIREYMAKGYDIVL 187
+ ++ + G D + + +A+ D+V+
Sbjct: 57 QLKIWGERVGATVISHSEGADPAAVAFDAVAHALARNKDVVI 98
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 34.0 bits (77), Expect = 0.016
Identities = 27/178 (15%), Positives = 52/178 (29%), Gaps = 29/178 (16%)
Query: 90 PNPLIIVISGPSGVGKDTVIKKLR----ESRDSLHFVVTATSRPMRPGEVNGKDYFFVSK 145
+ L + ++G +G GK + I LR E + V + P +
Sbjct: 54 SSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVV--- 110
Query: 146 EEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRV--------DIQGARTL 197
G P + + YD + + DI A+ +
Sbjct: 111 ------------FWDLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAI 158
Query: 198 RRILGDSAVFVFLAAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVV 255
+ FV +S++ E E +T ++E++L I +
Sbjct: 159 SMM-KKEFYFVRTKVDSDIT-NEADGEPQTFDKEKVLQDIRLNCVNTFRENGIAEPPI 214
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 33.5 bits (75), Expect = 0.017
Identities = 6/58 (10%), Positives = 15/58 (25%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQM 151
+ I G GK ++ KL ++ + + + +
Sbjct: 9 TVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALG 66
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 33.8 bits (77), Expect = 0.017
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 90 PNPLIIVISGPSGVGKDTVIKKLRE 114
P L + I GP G+GK T + L
Sbjct: 2 PTLLRVYIDGPHGMGKTTTTQLLVA 26
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 33.0 bits (74), Expect = 0.018
Identities = 19/156 (12%), Positives = 47/156 (30%), Gaps = 5/156 (3%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFF-VSKEEFLQMVD 153
IV G G GK T+ + L + L V + + F +E F + +
Sbjct: 3 IVFIGFMGSGKSTLARALAK---DLDLVFLDSDFLIEQKFNQKVSEIFEQKRENFFREQE 59
Query: 154 KNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAE 213
+ ++ + + + + +R+ D L
Sbjct: 60 QKMADFFSSCEKACIATGGGFVNVSNLEKAGFCIYLKADFEYLKKRLDKDEISKRPLFY- 118
Query: 214 SEMALVERLVERKTENREELLVRIATAREEVQHVKN 249
E+ + ER ++ ++ + + + + +
Sbjct: 119 DEIKAKKLYNERLSKYEQKANFILNIENKNIDELLS 154
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 32.7 bits (73), Expect = 0.026
Identities = 33/181 (18%), Positives = 51/181 (28%), Gaps = 34/181 (18%)
Query: 94 IIVISGPSGVGKDTVIKKL-RESRDSLHFVVTATSRPMR---------PGEVNGK----- 138
+ ++GP GVGK T+I K + S V + +R ++G
Sbjct: 3 HVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLS 62
Query: 139 ------DYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQ 192
+VD + AL + + + Q
Sbjct: 63 RVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFSQ 122
Query: 193 GARTLRRILGDSAVFVFLA-----AESEMALVERLVERKT--------ENREELLVRIAT 239
R + + L +ALVE + RK ENR LL I T
Sbjct: 123 LFIQAVRQTLSTPGTIILGTIPVPKGKPLALVEEIRNRKDVKVFNVTKENRNHLLPDIVT 182
Query: 240 A 240
Sbjct: 183 C 183
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 33.1 bits (74), Expect = 0.027
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 91 NPLIIVISGPSGVGKDTVIKKL 112
+ I I GP+ GK TV K +
Sbjct: 2 KTIQIAIDGPASSGKSTVAKII 23
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 33.1 bits (74), Expect = 0.028
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 94 IIVISGPSGVGKDTVIKKL 112
+I I GPSG GK T+ K +
Sbjct: 5 VITIDGPSGAGKGTLCKAM 23
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 32.5 bits (73), Expect = 0.029
Identities = 24/202 (11%), Positives = 57/202 (28%), Gaps = 22/202 (10%)
Query: 89 PPNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEF 148
L I G G GK TV ++ + + H +S + + V + F
Sbjct: 3 SARLLRAAIMGAPGSGKGTVSSRITKHFELKHL----SSGDLLRDNMLRGTEIGVLAKTF 58
Query: 149 LQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFV 208
+ L+ D + + + ++ + V
Sbjct: 59 IDQGK--------LIPDDVMTRLVLHELKNLTQYNWLLDGFPRTLPQAEALDRAYQIDTV 110
Query: 209 FLAAESEMALVERLVERKTENREELLVRIATAREEVQHVKNF-----DYVVVNAEGKLDS 263
+ +RL +R E ++ R+ + + V + + +
Sbjct: 111 INLNVPFEVIKQRLTDR----PETVVKRLKAYEAQTEPVLEYYRKKGVLETFSGTE-TNK 165
Query: 264 AVKLVESVIDAEKAKVRQRSAV 285
V + + + + Q ++V
Sbjct: 166 IWPHVYAFLQTKLPQRSQETSV 187
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 32.8 bits (74), Expect = 0.033
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 85 PVCPPPNPLIIVISGPSGVGKDTVIKKL 112
PV P ++++ G +GVGK T I KL
Sbjct: 1 PVEPKGR--VVLVVGVNGVGKTTTIAKL 26
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 31.9 bits (71), Expect = 0.044
Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 88 PPPNPLI-IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFF 142
PPP+ +V+ G GVGK + + +S + T + V+G
Sbjct: 1 PPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARL 56
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae
[TaxId: 727]}
Length = 205
Score = 32.2 bits (72), Expect = 0.050
Identities = 25/192 (13%), Positives = 63/192 (32%), Gaps = 10/192 (5%)
Query: 92 PLIIVISGPSGVGKDTVIKKLRE------SRDSLHFVVTATSRPMRPGEVNGKDYFFVSK 145
I+ ++G G GK T+ + D + V A P+ V +++
Sbjct: 2 TYIVGLTGGIGSGKTTIANLFTDLGVPLVDADVVAREVVAKDSPLLSKIVEHFGAQILTE 61
Query: 146 EEFL---QMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILG 202
+ L + ++ + ++ + P + R + L
Sbjct: 62 QGELNRAALRERVFNHDEDKLWLNNLLHPAIRERMKQKLAEQTAPYTLFVVPLLIENKLT 121
Query: 203 DSAVFVFLAAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKLD 262
+ + S + R +R N E++ + + + + +K D V+ N + +L
Sbjct: 122 ALCDRILVVDVSPQTQLARSAQRDNNNFEQIQRIMNSQVSQQERLKWADDVINN-DAELA 180
Query: 263 SAVKLVESVIDA 274
+ ++ +
Sbjct: 181 QNLPHLQQKVLE 192
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Length = 207
Score = 32.0 bits (72), Expect = 0.050
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 91 NPLIIVISGPSGVGKDTVIKKL 112
+ + + G G GK T KL
Sbjct: 9 DRNLWFLVGLQGSGKTTTAAKL 30
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 31.6 bits (70), Expect = 0.051
Identities = 23/157 (14%), Positives = 53/157 (33%), Gaps = 5/157 (3%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPG----EVNGKDYFFVSKEEFLQ 150
I + GP G GK T+ ++L + ++ F + R G V + ++ +
Sbjct: 5 IFLVGPMGAGKSTIGRQL-AQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEK 63
Query: 151 MVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFL 210
++++ + ++ + ++ R ++ +V + R + +
Sbjct: 64 VINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLHV 123
Query: 211 AAESEMALVERLVERKTENREELLVRIATAREEVQHV 247
L ER E V I T + + V
Sbjct: 124 ETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVV 160
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 32.3 bits (73), Expect = 0.059
Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 91 NPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGE-VNGKDY 140
L I + G G+GK T ++ + P+ + G+D
Sbjct: 4 GVLRIYLDGAYGIGKTTAAEEFLHHFAITPNRILLIGEPLSYWRNLAGEDA 54
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 31.7 bits (71), Expect = 0.063
Identities = 29/193 (15%), Positives = 59/193 (30%), Gaps = 16/193 (8%)
Query: 92 PLIIVISGPSGVGKDTVIKKLRE------SRDSLHFVVTATSRPMRPGEVNGKDY----- 140
I+ ++G G GK TV + D + V P +
Sbjct: 3 RYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGAPALHAIADHFGANMIAA 62
Query: 141 -FFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRR 199
+ + + + N + L + I ++ + VL V
Sbjct: 63 DGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQATSPYVLWVVPLLVENSLY 122
Query: 200 ILGDSAVFVFLAAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEG 259
+ + V ++ E+++ R ++R RE + +A + D V+ N G
Sbjct: 123 KKANRVLVVDVSPETQLK---RTMQRDDVTREHVEQILAAQATREARLAVADDVIDN-NG 178
Query: 260 KLDSAVKLVESVI 272
D+ V +
Sbjct: 179 APDAIASDVARLH 191
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 31.5 bits (70), Expect = 0.065
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 94 IIVISGPSGVGKDTVIKKL 112
++ + SG GK T++KKL
Sbjct: 4 LLAFAAWSGTGKTTLLKKL 22
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 31.5 bits (70), Expect = 0.066
Identities = 28/198 (14%), Positives = 56/198 (28%), Gaps = 26/198 (13%)
Query: 90 PNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTA--TSRPMRPGEVNGKDYFFVSKEE 147
P + V+ GP G GK T KL ++ H + E+ K + +
Sbjct: 1 PKGVRAVLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSELGKKLKATMDAGK 60
Query: 148 FLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVF 207
+ EL+E L K + + + A L ++
Sbjct: 61 LVSDEMVLELIEKNLETPPCKNGF---LLDGFPRTVRQ--------AEMLDDLMEKRKEK 109
Query: 208 VFLAAESEMALVERLVERKTENREE-------LLVRIATAREEVQHVKNF-----DYVVV 255
+ E + L+ R T L +R+ + + + + +
Sbjct: 110 LDSVIEFSIP-DSLLIRRITGRLIHSDDNKKALKIRLEAYHTQTTPLVEYYSKRGIHSAI 168
Query: 256 NAEGKLDSAVKLVESVID 273
+A D + +
Sbjct: 169 DASQTPDVVFASILAAFS 186
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 31.8 bits (71), Expect = 0.067
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 93 LIIVISGPSGVGKDTVIKKLRE 114
+I+I G GK T L +
Sbjct: 4 KLILIEGLDRTGKTTQCNILYK 25
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 31.7 bits (71), Expect = 0.073
Identities = 29/184 (15%), Positives = 56/184 (30%), Gaps = 21/184 (11%)
Query: 90 PNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFL 149
N L I++ G GVGK + + + R + P + L
Sbjct: 30 VNSLTILVMGKGGVGKSSTVNSIIGER-------VVSISPFQSEGPRPVMVSRSRAGFTL 82
Query: 150 QMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRV--------DIQGARTLRRIL 201
++D L+E + I K + + V R+ D A+ +
Sbjct: 83 NIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSF 142
Query: 202 GDSA----VFVFLAAESEMALVERLVERKTENREEL--LVRIATAREEVQHVKNFDYVVV 255
G + A+ E ++ E L +VR + ++ + V++
Sbjct: 143 GKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLI 202
Query: 256 NAEG 259
G
Sbjct: 203 ENSG 206
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 32.1 bits (71), Expect = 0.074
Identities = 13/108 (12%), Positives = 30/108 (27%), Gaps = 11/108 (10%)
Query: 89 PPNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATS--RPMRPGEVN--GKDYFFVS 144
I +I G +G GK +++ D++ + + ++ E G ++
Sbjct: 20 EFKEGINLIIGQNGSGKSSLL-------DAILVGLYWPLRIKDIKKDEFTKVGARDTYID 72
Query: 145 KEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQ 192
+ Y + K++ K I
Sbjct: 73 LIFEKDGTKYRITRRFLKGYSSGEIHAMKRLVGNEWKHVTEPSSKAIS 120
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 31.3 bits (69), Expect = 0.090
Identities = 9/106 (8%), Positives = 23/106 (21%), Gaps = 8/106 (7%)
Query: 87 CPPPNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKE 146
P + + +G S GK + + L + T+ + F +
Sbjct: 11 LPSDTGIEVAFAGRSNAGKSSALNTLTNQK---SLARTSKTPGRTQ-----LINLFEVAD 62
Query: 147 EFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQ 192
+ K + ++ +
Sbjct: 63 GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDI 108
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 31.3 bits (70), Expect = 0.097
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 92 PLIIVISGPSGVGKDTVIKKLRE 114
PL I SGP G GK ++
Sbjct: 27 PLFIFFSGPQGSGKSFTSIQIYN 49
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 30.9 bits (68), Expect = 0.11
Identities = 10/49 (20%), Positives = 17/49 (34%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFF 142
+ I G VGK T++ L + + T+R G +
Sbjct: 7 FVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQI 55
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 31.6 bits (70), Expect = 0.12
Identities = 17/107 (15%), Positives = 30/107 (28%), Gaps = 13/107 (12%)
Query: 88 PPPNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEV-----NGKDYFF 142
I GP+G GK ++ D++ FV+ S +R + G
Sbjct: 21 GFGESNFTSIIGPNGSGKSNMM-------DAISFVLGVRSNHLRSNILKDLIYRGVLNDE 73
Query: 143 VSKE-EFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLR 188
S + + N Y + + +R G
Sbjct: 74 NSDDYDNEGAASSNPQSAYVKAFYQKGNKLVELMRIISRNGDTSYKI 120
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 31.1 bits (70), Expect = 0.12
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 91 NPLIIVISGPSGVGKDTVIKKLRE 114
II ++G SG G TV +
Sbjct: 3 KHPIISVTGSSGAGTSTVKHTFDQ 26
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 30.8 bits (68), Expect = 0.12
Identities = 8/57 (14%), Positives = 19/57 (33%), Gaps = 4/57 (7%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQM 151
++ G GK T++ L+ R + E+ + F + + +
Sbjct: 3 LLFLGLDNAGKTTLLHMLKNDR----LATLQPTWHPTSEELAIGNIKFTTFDLGGHI 55
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 31.4 bits (70), Expect = 0.12
Identities = 24/151 (15%), Positives = 49/151 (32%), Gaps = 8/151 (5%)
Query: 91 NPLIIVISGPSGVGKDTVIKKL-RESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFL 149
N L + ++G G GK T ++ V P P G K
Sbjct: 53 NTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSP-VTGGSIL--GDKTRMN 109
Query: 150 QMVDKNELLEYALVYGDYKGIPKKQIREYM----AKGYDIVLRVDIQGARTLRRILGDSA 205
+ + + G ++ RE M A GYD+V+ + ++ +
Sbjct: 110 DLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVD 169
Query: 206 VFVFLAAESEMALVERLVERKTENREELLVR 236
F+ L ++ + + E + +++
Sbjct: 170 CFISLQIAGGGDDLQGIKKGLMEVADLIVIN 200
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 30.3 bits (67), Expect = 0.13
Identities = 24/159 (15%), Positives = 46/159 (28%), Gaps = 4/159 (2%)
Query: 90 PNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEF- 148
P V+ G G GK T+ ++L ++ + +E
Sbjct: 2 PK---AVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRR 58
Query: 149 LQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFV 208
++ L G A V+ ++I A +RR G++ +
Sbjct: 59 IEEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRPL 118
Query: 209 FLAAESEMALVERLVERKTENREELLVRIATAREEVQHV 247
+ + +R R +R+ T R V
Sbjct: 119 LAGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAV 157
>d3clsd2 c.31.1.2 (D:196-318) C-terminal domain of the electron
transfer flavoprotein alpha subunit {Methylophilus
methylotrophus [TaxId: 17]}
Length = 123
Score = 29.7 bits (67), Expect = 0.16
Identities = 9/50 (18%), Positives = 20/50 (40%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVS 144
++S G+G++T +++ RE D + + G + S
Sbjct: 9 FIMSIGRGIGEETNVEQFRELADEAGATLCCSCPIADAGWLPKSRQVGQS 58
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 30.4 bits (68), Expect = 0.18
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 89 PPNPLIIVISGPSGVGKDTVIKKLRE 114
P II I+G VGK T + L+
Sbjct: 77 QRIPYIISIAGSVAVGKSTTARVLQA 102
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 30.3 bits (67), Expect = 0.19
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLH 120
+V+ GP G GK T L+E + H
Sbjct: 5 MVLIGPPGAGKGTQAPNLQERFHAAH 30
>d1efva2 c.31.1.2 (A:208-331) C-terminal domain of the electron
transfer flavoprotein alpha subunit {Human (Homo
sapiens) [TaxId: 9606]}
Length = 124
Score = 29.3 bits (66), Expect = 0.20
Identities = 13/50 (26%), Positives = 20/50 (40%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVS 144
+V+SG G+ K L + D LH V A+ + G V +
Sbjct: 10 VVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQT 59
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 30.2 bits (67), Expect = 0.21
Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 91 NPL-IIVISGPSGVGKDTVIKKLRESRDSLHFVV 123
NP+ + +++G G GK T+++ + + V
Sbjct: 1 NPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAV 34
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 253
Score = 30.1 bits (66), Expect = 0.23
Identities = 10/46 (21%), Positives = 17/46 (36%)
Query: 68 ELLRSLEASLGHAFDSNPVCPPPNPLIIVISGPSGVGKDTVIKKLR 113
L + E S ++F ++ GP G+GK T +
Sbjct: 28 NWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVA 73
>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase
(ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}
Length = 431
Score = 30.4 bits (67), Expect = 0.23
Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 156 ELLEYALVYGDYKGIP--KKQIREYMAKGYDIVLRVD 190
+ ++ DY G+P KK + ++MA+ + D
Sbjct: 72 SIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFD 108
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 29.6 bits (65), Expect = 0.27
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 95 IVISGPSGVGKDTVIKKL 112
I+I+G GVGK T++KK+
Sbjct: 3 IIITGEPGVGKTTLVKKI 20
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 29.7 bits (65), Expect = 0.27
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFF 142
I+I G G GK T++ +L+ V T + V K+ F
Sbjct: 8 ILILGLDGAGKTTILYRLQVGE----VVTTIPTIGFNVETVTYKNLKF 51
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 30.1 bits (66), Expect = 0.29
Identities = 7/39 (17%), Positives = 14/39 (35%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRP 132
I ++ G GK ++IK + + + R
Sbjct: 31 ITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERN 69
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 29.2 bits (64), Expect = 0.31
Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDK 154
I++ G GK T++ KL+ V T + V K+ F + Q +
Sbjct: 3 ILMVGLDAAGKTTILYKLKLGE----IVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIR 58
Query: 155 NELLEY 160
Y
Sbjct: 59 PLWRHY 64
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 29.2 bits (64), Expect = 0.32
Identities = 15/69 (21%), Positives = 31/69 (44%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDK 154
+VI G VGK T++ +L ++ + T+R + E+ + F + +
Sbjct: 3 MVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSET 62
Query: 155 NELLEYALV 163
N+L+E +
Sbjct: 63 NDLVERLGI 71
>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase
(ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId:
4081]}
Length = 428
Score = 30.0 bits (66), Expect = 0.38
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 158 LEYALVYGDYKGIP--KKQIREYMAKGYDIVLRVD 190
+ + DY G+P +K I ++M K +R D
Sbjct: 73 FKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFD 107
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 29.5 bits (65), Expect = 0.38
Identities = 13/75 (17%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Query: 93 LIIVISGPSGVGKDTVIKKLRESRDSLHF-----VVTATSRPMRPGEVNGKDYFFVSKEE 147
+I +SG GKDT + + ++ + + A + N KE
Sbjct: 2 KLIFLSGVKRSGKDTTADFIMSNYSAVKYQLAGPIKDALAYAWGVFAANTDYPCLTRKEF 61
Query: 148 FLQMVDKNELLEYAL 162
D+ L
Sbjct: 62 EGIDYDRETNLNLTK 76
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 29.3 bits (64), Expect = 0.43
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 92 PLIIVISGPSGVGKDTVIKKL 112
+ ++G SG GK TV L
Sbjct: 19 GCTVWLTGLSGAGKTTVSMAL 39
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 28.7 bits (63), Expect = 0.47
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 94 IIVISGPSGVGKDTVIKKL 112
+ + G GK T+++K
Sbjct: 3 VWQVVGYKHSGKTTLMEKW 21
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli
[TaxId: 562]}
Length = 222
Score = 29.2 bits (64), Expect = 0.49
Identities = 11/94 (11%), Positives = 25/94 (26%), Gaps = 7/94 (7%)
Query: 89 PPNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEF 148
+ L+ +SG +G GK T + + + + S+++
Sbjct: 21 DLDELVTTLSGGNGAGKSTTM-------AAFVTALIPDLTLLHFRNTTEAGATSGSRDKG 73
Query: 149 LQMVDKNELLEYALVYGDYKGIPKKQIREYMAKG 182
L K + L + +
Sbjct: 74 LHGKLKAGVCYSMLDTINSRHQRVVVGVRLQQVA 107
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 28.9 bits (63), Expect = 0.53
Identities = 6/48 (12%), Positives = 16/48 (33%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFF 142
+ + G GK T + + + + + T + + N +
Sbjct: 5 LTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLW 52
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 29.0 bits (63), Expect = 0.55
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 87 CPPPNPLIIVISGPSGVGKDTVIKKLR 113
P I ++G S VGK + I L
Sbjct: 18 YPEGGLPEIALAGRSNVGKSSFINSLI 44
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 28.8 bits (63), Expect = 0.61
Identities = 23/188 (12%), Positives = 48/188 (25%), Gaps = 6/188 (3%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVD 153
I+I+GP GK +++ L V + + +
Sbjct: 5 SIIIAGPQNSGKTSLLTLLTTDS-----VRPTVVSQEPLSAADYDGSGVTLVDFPGHVKL 59
Query: 154 KNELLEYALVYGDYKGIPKKQIR-EYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAA 212
+ +L +Y + + K + + +
Sbjct: 60 RYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIACN 119
Query: 213 ESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKLDSAVKLVESVI 272
+SE+ + K E+ I ++ + V+ AE LD
Sbjct: 120 KSELFTARPPSKIKDALESEIQKVIERRKKSLNEVERKINEEDYAENTLDVLQSTDGFKF 179
Query: 273 DAEKAKVR 280
+A V
Sbjct: 180 ANLEASVV 187
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 28.5 bits (62), Expect = 0.71
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 92 PLIIVISGPSGVGKDTVIKKL 112
I ++G GKD + + L
Sbjct: 6 GFTIFLTGYMNSGKDAIARAL 26
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 28.2 bits (62), Expect = 0.73
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTAT-SRPMRPGEVNGKDYFF 142
+++ G SGVGK V+ + E + F+ T +R E++GK
Sbjct: 9 LLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKL 57
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 28.6 bits (62), Expect = 0.75
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 68 ELLRSLEASLGHAFDSNPVCPPPNPLIIVISGPSGVGKDTVIK 110
+ L+ L+ LG+ NP P + G G GK ++
Sbjct: 23 QQLQQLDILLGNWLR-NPGHHYPR---ATLLGRPGTGKTVTLR 61
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 28.7 bits (64), Expect = 0.80
Identities = 28/182 (15%), Positives = 68/182 (37%), Gaps = 24/182 (13%)
Query: 94 IIVISGPSGVGKDTVIKKLR--------ESRDSLHFVVTATSRPMRPGEVNGKDYFFVSK 145
++ I+G +G GK +++ + + S + + PG + F VS
Sbjct: 64 MLAITGSTGSGKTSLLMLILGELEASEGIIKHSGRVSFCSQFSWIMPGTIKENIIFGVSY 123
Query: 146 EEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSA 205
+E +++ + D ++ + +G + R + D+
Sbjct: 124 DE----YRYKSVVKACQLQQDITKFAEQ-DNTVLGEGGVTLSGGQRARISLARAVYKDAD 178
Query: 206 VFVF------LAAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEG 259
+++ L +E + E V + N+ +LV T++ E H++ D +++ +G
Sbjct: 179 LYLLDSPFGYLDVFTEEQVFESCVCKLMANKTRILV---TSKME--HLRKADKILILHQG 233
Query: 260 KL 261
Sbjct: 234 SS 235
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 28.7 bits (63), Expect = 0.82
Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 6/130 (4%)
Query: 90 PNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFL 149
+ + I+G GVGK T I L + V + K
Sbjct: 49 GRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTG--GSILGDKTRMA 106
Query: 150 QMVDKNELLEYALVYGDYKGIPKKQIREYMA----KGYDIVLRVDIQGARTLRRILGDSA 205
++ G + RE M G+D++L + ++ + +
Sbjct: 107 RLAIDRNAFIRPSPSSGTLGGVAAKTRETMLLCEAAGFDVILVETVGVGQSETAVADLTD 166
Query: 206 VFVFLAAESE 215
F+ L
Sbjct: 167 FFLVLMLPGA 176
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54
(NtrC1), C-terminal domain {Aquifex aeolicus [TaxId:
63363]}
Length = 247
Score = 28.3 bits (63), Expect = 0.84
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMV-D 153
++I+G SGVGK+ V + + + D A + P ++ + F K F V
Sbjct: 26 VLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSS 85
Query: 154 KNELLEYA 161
K E A
Sbjct: 86 KEGFFELA 93
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 28.1 bits (61), Expect = 0.86
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 95 IVISGPSGVGKDTVIKKLRESR 116
+++ G GK T++KK
Sbjct: 5 LLMLGLDNAGKTTILKKFNGED 26
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 28.6 bits (62), Expect = 0.89
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 94 IIVISGPSGVGKDTVIKKLR 113
I +I G +G GK +++ +
Sbjct: 25 INLIIGQNGSGKSSLLDAIL 44
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 28.0 bits (61), Expect = 0.94
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 88 PPPNPLIIVISGPSGVGKDTVIKKLRESRDSLH 120
P + I++ G GK T++K+L S
Sbjct: 12 APDQEVRILLLGLDNAGKTTLLKQLASEDISHI 44
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 28.1 bits (61), Expect = 0.95
Identities = 14/50 (28%), Positives = 20/50 (40%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFV 143
I I G VGK T++ KL + S+ T+R G Y +
Sbjct: 7 FIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAI 56
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 28.0 bits (61), Expect = 0.97
Identities = 13/63 (20%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Query: 89 PPNPLI-IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEE 147
P ++ V+ G VGK ++ +V T V GK Y +
Sbjct: 5 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 64
Query: 148 FLQ 150
Q
Sbjct: 65 AGQ 67
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase
III, N-domain {Escherichia coli [TaxId: 562]}
Length = 207
Score = 28.2 bits (61), Expect = 1.1
Identities = 28/215 (13%), Positives = 52/215 (24%), Gaps = 34/215 (15%)
Query: 68 ELLRSLEAS-LGHAFDSNPVCPPPNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTAT 126
+L+ S +A HA ++I G+G D +I L
Sbjct: 13 KLVASYQAGRGHHA--------------LLIQALPGMGDDALIYALSRYLLCQQP----- 53
Query: 127 SRPMRPGEVNGKDYFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIV 186
+ + + + D +++ E+ G V
Sbjct: 54 --QGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKV 111
Query: 187 LRVDIQGARTLRRILGDSAVFVFLAAESEMALVERLVERKTENREELLVRIATAREEVQH 246
+ V T AE+ L R ER A Q+
Sbjct: 112 VWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQY 171
Query: 247 VKNF------------DYVVVNAEGKLDSAVKLVE 269
+ + + G +A+ L +
Sbjct: 172 AVTWLSREVTMSQDALLAALRLSAGSPGAALALFQ 206
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB
{Thermus thermophilus [TaxId: 274]}
Length = 239
Score = 28.0 bits (61), Expect = 1.1
Identities = 32/193 (16%), Positives = 67/193 (34%), Gaps = 29/193 (15%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDK 154
+++ GP G+GK T+ + ++ VT+ +PG++ + + + L + +
Sbjct: 38 LLLFGPPGLGKTTLAHVIAHELG-VNLRVTSGPAIEKPGDLAAILANSLEEGDILFIDEI 96
Query: 155 NELLEYALVYGDYKGIPKKQIREYMAKGYD--IVLRVDIQGARTLRRILGDSAVFVFLAA 212
+ +Q E++ + ++ V QG R I + F + A
Sbjct: 97 HR--------------LSRQAEEHLYPAMEDFVMDIVIGQGP-AARTIRLELPRFTLIGA 141
Query: 213 E-----------SEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKL 261
S +VE L E + ++R A + + + G +
Sbjct: 142 TTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTM 201
Query: 262 DSAVKLVESVIDA 274
A +L V D
Sbjct: 202 RVAKRLFRRVRDF 214
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 27.8 bits (60), Expect = 1.1
Identities = 9/48 (18%), Positives = 14/48 (29%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFF 142
+V+ G GVGK T+ DS+ +
Sbjct: 6 VVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESA 53
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 27.7 bits (60), Expect = 1.3
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 95 IVISGPSGVGKDTVIKKLRESR 116
+V G GK T++ L++ R
Sbjct: 16 LVFLGLDNAGKTTLLHMLKDDR 37
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic
domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 254
Score = 27.7 bits (60), Expect = 1.3
Identities = 28/205 (13%), Positives = 51/205 (24%), Gaps = 22/205 (10%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVD 153
I + G G GK + H + P G +NG + ++ F
Sbjct: 38 ITEVFGEFGSGKTQL----------AHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERI 87
Query: 154 KNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAA- 212
+ L + +V + + + L + V
Sbjct: 88 REIAQNRGLDPDEVLKHIYVARAFNSNHQMLLVQQAEDKIKELLNTDRPVKLLIVDSLTS 147
Query: 213 --ESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKLDSAVK---- 266
SE L ER+ + + L A V + V + +
Sbjct: 148 HFRSEYIGRGALAERQQKLAKHLADLHRLANLYDIAVFVTNQVQARPDAFFGDPTRPIGG 207
Query: 267 -----LVESVIDAEKAKVRQRSAVI 286
+ K K +R A +
Sbjct: 208 HILAHSATLRVYLRKGKGGKRIARL 232
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 27.7 bits (60), Expect = 1.4
Identities = 5/24 (20%), Positives = 11/24 (45%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDS 118
++I G GK T++ + +
Sbjct: 18 VIIVGLDNAGKTTILYQFSMNEVV 41
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 27.6 bits (60), Expect = 1.4
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 95 IVISGPSGVGKDTVIKKL 112
I + G G G TV ++L
Sbjct: 5 IFMVGARGCGMTTVGREL 22
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 27.7 bits (60), Expect = 1.5
Identities = 25/202 (12%), Positives = 55/202 (27%), Gaps = 10/202 (4%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVD 153
+ +G G GK ++ + + + F+ + K ++ E +
Sbjct: 36 VTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPK-AVYIDTEGTFRPER 94
Query: 154 KNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAE 213
++ E+A + G R Y + + + I +
Sbjct: 95 IMQMAEHAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDLIQEGNNIKLVVIDSLTSTFR 154
Query: 214 SEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKLDSAVK------- 266
+E +L ER+ + + A V + V + A +
Sbjct: 155 NEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLVTNQVSAKPDAFFGMAEQAIGGHIV 214
Query: 267 --LVESVIDAEKAKVRQRSAVI 286
K K +R A +
Sbjct: 215 GHAATFRFFVRKGKGDKRVAKL 236
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 27.5 bits (60), Expect = 1.5
Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPG-EVNGKDYFF 142
IV+ G +GVGK ++++ + T M E+NG+
Sbjct: 8 IVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKL 56
>d3frua2 d.19.1.1 (A:1-178) Fc (IgG) receptor, alpha-1 and alpha-2
domains {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 178
Score = 27.3 bits (60), Expect = 1.6
Identities = 6/21 (28%), Positives = 8/21 (38%), Gaps = 1/21 (4%)
Query: 114 ESRDSLHFVVTATSRPMRPGE 134
E R L + + A S G
Sbjct: 2 EPRLPLMYHLAAVSDL-STGL 21
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 27.4 bits (59), Expect = 1.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 95 IVISGPSGVGKDTVIKKLRESR 116
I+ +G S VGK T+I +L +
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGKK 24
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 27.1 bits (59), Expect = 1.8
Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPG-EVNGKDYFF 142
+V+ G SGVGK ++ + + +L T +V+GK
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA 55
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 27.4 bits (59), Expect = 1.9
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVT 124
++I G SGVGK +++ + + S + T
Sbjct: 5 VIILGDSGVGKTSLMNQYVNKKFSNQYKAT 34
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 27.0 bits (58), Expect = 2.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSL 119
++I G VGK T+ KL + + ++
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKKKAI 27
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 27.4 bits (59), Expect = 2.1
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 84 NPVCPPPNPLIIVISGPSGVGKDTVIKKL 112
+ +I G G+GK T+ K
Sbjct: 38 SGAGLSDVNMIYGSIGRVGIGKTTLAKFT 66
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever
virus [TaxId: 11089]}
Length = 299
Score = 27.3 bits (60), Expect = 2.1
Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 5/92 (5%)
Query: 192 QGARTLRRILGDSAVFVFLAAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFD 251
G + +A F+ + + L + + +++ T E +K
Sbjct: 27 TGHDWILADKRPTAWFLPSIRAAN-VMAASLRKA---GKSVVVLNRKTFEREYPTIKQKK 82
Query: 252 YVVVNAEGKLDSAVKL-VESVIDAEKAKVRQR 282
+ A + L VE V+D A
Sbjct: 83 PDFILATDIAEMGANLCVERVLDCRTAFKPVL 114
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 26.8 bits (58), Expect = 2.1
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 95 IVISGPSGVGKDTVIKKLRE 114
I++ G GK T++ KL+
Sbjct: 15 ILMLGLDAAGKTTILYKLKL 34
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 27.0 bits (58), Expect = 2.2
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDS 118
+++ G GVGK + + D
Sbjct: 4 VLLLGAPGVGKSALARIFGGVEDG 27
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 27.1 bits (58), Expect = 2.3
Identities = 9/62 (14%), Positives = 13/62 (20%), Gaps = 9/62 (14%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVD 153
I + G GK + VT R G Y + +
Sbjct: 25 ITEMFGEFRTGKTQI---------CHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLL 75
Query: 154 KN 155
Sbjct: 76 AV 77
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter
vinelandii [TaxId: 354]}
Length = 289
Score = 27.2 bits (59), Expect = 2.3
Identities = 6/15 (40%), Positives = 7/15 (46%)
Query: 94 IIVISGPSGVGKDTV 108
I G G+GK T
Sbjct: 4 QCAIYGKGGIGKSTT 18
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 26.8 bits (58), Expect = 2.3
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVD 153
I+I G S VGK + + + + T + K + K LQ+ D
Sbjct: 8 ILIIGNSSVGKTSFLFRYADDS------FTPAFVSTVGIDFKVKTIYRNDKRIKLQIWD 60
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 27.1 bits (60), Expect = 2.4
Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 19/109 (17%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEV--NGKDYFFVSKEEFLQM 151
+I I G SG GK T ++ ++F+ + G + NG++ V ++
Sbjct: 30 VISIIGSSGSGKSTFLR-------CINFLEKPSE-----GAIIVNGQNINLVRDKDGQLK 77
Query: 152 VDKNELLEY-----ALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGAR 195
V L +V+ + + E + + VL + AR
Sbjct: 78 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKHDAR 126
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 26.7 bits (58), Expect = 2.4
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVT 124
I++ G SGVGK ++ + E + + F+ T
Sbjct: 5 ILLIGDSGVGKSCLLVRFVEDKFNPSFITT 34
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 26.8 bits (59), Expect = 2.5
Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 10/102 (9%)
Query: 94 IIVISGPSGVGKDTVIKKL-----RESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEF 148
I+ + G +G GK T + + + + T++P G + F
Sbjct: 34 IVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIALVPEGRRIF 93
Query: 149 LQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVD 190
++ L+ A D K+ I+ + + + R+
Sbjct: 94 PELTVYENLMMGAYNRKD-----KEGIKRDLEWIFSLFPRLK 130
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 26.8 bits (58), Expect = 2.6
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPM 130
++ G SGVGK T + + +++ + F+ T
Sbjct: 8 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFR 43
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 26.6 bits (57), Expect = 2.7
Identities = 8/48 (16%), Positives = 20/48 (41%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFF 142
+VI+G GK +++ L ++ + T+R + ++
Sbjct: 4 VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPL 51
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 26.9 bits (58), Expect = 2.7
Identities = 4/22 (18%), Positives = 9/22 (40%)
Query: 95 IVISGPSGVGKDTVIKKLRESR 116
++ G GK + +L +
Sbjct: 3 VLFVGLCDSGKTLLFVRLLTGQ 24
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.5 bits (57), Expect = 2.7
Identities = 6/48 (12%), Positives = 17/48 (35%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFF 142
+ + G GVGK +++ + + ++ T + +
Sbjct: 5 VAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTL 52
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.8 bits (58), Expect = 2.8
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDS 118
I++ G GK T +K++R
Sbjct: 5 ILLLGAGESGKSTFLKQMRIIHGQ 28
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 26.5 bits (57), Expect = 2.9
Identities = 10/56 (17%), Positives = 19/56 (33%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQ 150
V+ G VGK ++ ++ +V T + G+ Y + Q
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 26.5 bits (57), Expect = 3.1
Identities = 9/46 (19%), Positives = 18/46 (39%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDY 140
+ I G +GVGK ++ + R + T S ++ +
Sbjct: 5 LAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVV 50
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 26.2 bits (56), Expect = 3.1
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 95 IVISGPSGVGKDTVIKKLRESR 116
+V+ G VGK ++I++ +
Sbjct: 5 MVVVGNGAVGKSSMIQRYCKGI 26
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.4 bits (57), Expect = 3.3
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 95 IVISGPSGVGKDTVIKKLRE 114
+++ G GK T IK++R
Sbjct: 5 LLLLGTGESGKSTFIKQMRI 24
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 26.5 bits (57), Expect = 3.3
Identities = 9/48 (18%), Positives = 18/48 (37%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFF 142
IV+ G S GK ++ + ++V T E++ +
Sbjct: 5 IVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIEL 52
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 251
Score = 26.6 bits (57), Expect = 3.4
Identities = 10/57 (17%), Positives = 15/57 (26%), Gaps = 10/57 (17%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQ 150
I + G GK + VT G GK + ++ F
Sbjct: 36 ITELFGEFRTGKSQL---------CHTLAVTCQIPLDIGGG-EGKCLYIDTEGTFRP 82
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 26.6 bits (58), Expect = 3.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 94 IIVISGPSGVGKDTVIK 110
VI GP+G GK ++
Sbjct: 28 YFVILGPTGAGKTLFLE 44
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 26.2 bits (56), Expect = 3.4
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVT 124
++I G SGVGK +++ + + S + T
Sbjct: 5 VIILGDSGVGKTSLMHRYVNDKYSQQYKAT 34
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 26.6 bits (58), Expect = 3.5
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVT 124
+++ G GK T++K++R H V+T
Sbjct: 9 LLLLGAGESGKSTIVKQMRIL----HVVLT 34
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 296
Score = 26.5 bits (57), Expect = 3.6
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 92 PLIIVISGPSGVGKDTV 108
P + +G GVGK ++
Sbjct: 8 PPYLFFTGKGGVGKTSI 24
>d1l5ja2 c.8.2.1 (A:161-372) Aconitase B, second N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 212
Score = 26.3 bits (58), Expect = 3.6
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 171 PKKQIREYMAKGYDIVLRVDIQGARTLRR 199
P KQI KG+ + D+ G + R+
Sbjct: 59 PIKQIEALQQKGFPLAYVGDVVGTGSSRK 87
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium
pasteurianum [TaxId: 1501]}
Length = 269
Score = 26.4 bits (57), Expect = 3.6
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 94 IIVISGPSGVGKDTV 108
+ I G G+GK T
Sbjct: 3 QVAIYGKGGIGKSTT 17
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 26.5 bits (57), Expect = 3.7
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 94 IIVISGPSGVGKDTV 108
+I++ G GVGK T+
Sbjct: 22 LIMLMGKGGVGKTTM 36
>d1grja1 a.2.1.1 (A:2-79) GreA transcript cleavage protein,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 78
Score = 25.0 bits (55), Expect = 3.8
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 210 LAAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAE-GKLDSAVKLV 268
+ L E L K+ R E++ IA ARE +N +Y + G + +K +
Sbjct: 5 MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDI 64
Query: 269 ESVID 273
E+ +
Sbjct: 65 EAKLS 69
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 26.5 bits (58), Expect = 3.9
Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 94 IIVISGPSGVGKDTVIKKL--RESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQM 151
I + GP+G GK T ++ + S V + P EV + E
Sbjct: 30 IFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHEVRKLISYL---PEEAGA 86
Query: 152 VDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIV 186
+ +EY + +I E + + +I
Sbjct: 87 YRNMQGIEYLRFVAGFYASSSSEIEEMVERATEIA 121
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 26.0 bits (57), Expect = 4.0
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 94 IIVISGPSGVGKDTVIK 110
++ GP+G+GK T++K
Sbjct: 29 VVNFHGPNGIGKTTLLK 45
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 26.3 bits (57), Expect = 4.0
Identities = 31/185 (16%), Positives = 58/185 (31%), Gaps = 11/185 (5%)
Query: 92 PLIIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRP--MRPGEVNGKDYFFVSKEEFL 149
L I ++G S GK T+ +L V +R G + + E +
Sbjct: 24 GLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENI 83
Query: 150 Q-MVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFV 208
+ + + +L + I + A+ + T G V V
Sbjct: 84 RRIAEVAKLFADSNSIAITSFISPYRKDRDTAR--------QLHEVATPGEETGLPFVEV 135
Query: 209 FLAAESEMALVERLVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKLDSAVKLV 268
++ E+A + RE ++ + N + V N E + AVK +
Sbjct: 136 YVDVPVEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVHVKNYELPVQDAVKQI 195
Query: 269 ESVID 273
+D
Sbjct: 196 IDYLD 200
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 26.1 bits (56), Expect = 4.1
Identities = 5/20 (25%), Positives = 13/20 (65%)
Query: 95 IVISGPSGVGKDTVIKKLRE 114
+++ G GK T++K+++
Sbjct: 5 LLLLGAGESGKSTIVKQMKI 24
>d2hyja2 a.121.1.1 (A:83-200) Putative transcriptional regulator
SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Length = 118
Score = 25.5 bits (55), Expect = 4.1
Identities = 5/35 (14%), Positives = 11/35 (31%), Gaps = 5/35 (14%)
Query: 191 IQGARTLRRILGDSAVFVFLAAESEMALVERLVER 225
++ D AA+ +ER + +
Sbjct: 88 GLALNAAMQLQHDRT-----AADRARRAIERALAQ 117
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 26.0 bits (56), Expect = 4.1
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVT 124
+++ G SGVGK ++ + + + ++ T
Sbjct: 9 LLLIGNSGVGKSCLLLRFSDDTYTNDYIST 38
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 26.2 bits (57), Expect = 4.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 94 IIVISGPSGVGKDTVIK 110
I GPSG GK T ++
Sbjct: 33 RFGILGPSGAGKTTFMR 49
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 26.1 bits (57), Expect = 4.5
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 94 IIVISGPSGVGKDTVIK 110
V+ GP+G GK ++
Sbjct: 26 YCVLLGPTGAGKSVFLE 42
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 25.8 bits (55), Expect = 4.7
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 95 IVISGPSGVGKDTVIKKL 112
+V+ G G GK T +K+
Sbjct: 6 LVLVGDGGTGKTTFVKRH 23
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 26.1 bits (57), Expect = 4.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 94 IIVISGPSGVGKDTVIK 110
+V GPSG GK T+++
Sbjct: 28 FVVFVGPSGCGKSTLLR 44
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 25.8 bits (55), Expect = 4.7
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 91 NPLIIVISGPSGVGKDTVIKKLRESRDSL 119
+ + + I G VGK T+ + +L
Sbjct: 7 DAIKVAIVGRPNVGKSTLFNAILNKERAL 35
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken
(Gallus gallus), Va isoform [TaxId: 9031]}
Length = 730
Score = 26.3 bits (57), Expect = 4.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 95 IVISGPSGVGKDTVIKKL 112
I++SG SG GK K
Sbjct: 97 IIVSGESGAGKTVSAKYA 114
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 25.8 bits (55), Expect = 5.2
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 95 IVISGPSGVGKDTVIKKLRESR 116
+V+ G + VGK +++ + +
Sbjct: 6 LVLLGEAAVGKSSIVLRFVSND 27
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 25.6 bits (55), Expect = 5.2
Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPG-EVNGKDYFFV 143
+I G GVGK ++ + E + T EV+G+
Sbjct: 7 YIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQ 56
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 25.6 bits (55), Expect = 5.3
Identities = 5/22 (22%), Positives = 12/22 (54%)
Query: 95 IVISGPSGVGKDTVIKKLRESR 116
++ G +G GK ++ + E +
Sbjct: 8 FLVIGNAGTGKSCLLHQFIEKK 29
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 26.1 bits (57), Expect = 5.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 94 IIVISGPSGVGKDTVIK 110
+ +I GP+G GK T+I
Sbjct: 32 VTLIIGPNGSGKSTLIN 48
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 25.7 bits (55), Expect = 5.4
Identities = 11/48 (22%), Positives = 19/48 (39%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFF 142
+VI G GK ++ + + +V T + EV+GK
Sbjct: 5 LVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVEL 52
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 26.0 bits (57), Expect = 5.5
Identities = 15/97 (15%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 94 IIVISGPSGVGKDTVIKKL----RESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFL 149
+++ GPSG GK T ++ + SR ++ + P + V KD +
Sbjct: 31 FMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQSY 90
Query: 150 QMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIV 186
+ + + + +P+++I + + + +++
Sbjct: 91 ALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREVAELL 127
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain
{Dictyostelium discoideum [TaxId: 44689]}
Length = 712
Score = 26.2 bits (57), Expect = 5.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 95 IVISGPSGVGKDTVIKKL 112
++I+G SG GK KK+
Sbjct: 128 LLITGESGAGKTENTKKV 145
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 25.7 bits (55), Expect = 5.7
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDS 118
I+I G G GK T++ +L+
Sbjct: 20 ILILGLDGAGKTTILYRLQIGEVV 43
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 25.6 bits (55), Expect = 5.8
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 95 IVISGPSGVGKDTVIKKLRESR 116
I+I G SGVGK +++ + +
Sbjct: 10 ILIIGESGVGKSSLLLRFTDDT 31
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 794
Score = 26.2 bits (57), Expect = 5.8
Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQM 151
I+I+G SG GK K++ + + T + + E +++ +
Sbjct: 126 ILITGESGAGKTVNTKRV------IQYFATIAASGEKKKEEQSGKMQGTLEDQIISA 176
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 25.6 bits (56), Expect = 5.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 94 IIVISGPSGVGKDTVIK 110
II +GPSG GK T+
Sbjct: 30 IIAFAGPSGGGKSTIFS 46
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 25.6 bits (55), Expect = 5.9
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 95 IVISGPSGVGKDTVIKKLRESR 116
+++ G SGVGK ++ + ++
Sbjct: 9 VMLVGDSGVGKTCLLVRFKDGA 30
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 25.7 bits (55), Expect = 6.7
Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 8/103 (7%)
Query: 81 FDSNPVCPPPNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVV-TATSRPMRPGEVNGKD 139
+ + V P + I G +G GK + D++ FV+ +++ MR ++
Sbjct: 15 YGNKKVVIPFSKGFTAIVGANGSGKSNIG-------DAILFVLGGLSAKAMRASRISDLI 67
Query: 140 YFFVSKEEFLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKG 182
+ E + + R G
Sbjct: 68 FAGSKNEPPAKYAEVAIYFNNEDRGFPIDEDEVVIRRRVYPDG 110
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 25.5 bits (56), Expect = 6.7
Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 18/101 (17%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEE-FLQMV 152
+V+ GPSG GK T ++ + + T + +D ++ ++ + MV
Sbjct: 34 FLVLLGPSGCGKTTTLR-------MIAGLEEPTEGRIY---FGDRDVTYLPPKDRNISMV 83
Query: 153 -------DKNELLEYALVYGDYKGIPKKQIREYMAKGYDIV 186
+ E K PK +I + + +++
Sbjct: 84 FQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAELL 124
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 25.4 bits (54), Expect = 6.8
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 95 IVISGPSGVGKDTVIKKLRESR 116
+ + G +GVGK +++ + E
Sbjct: 7 VCLLGDTGVGKSSIMWRFVEDS 28
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 25.4 bits (54), Expect = 6.8
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 95 IVISGPSGVGKDTVIKKLRESR 116
I++ G S VGK + + R
Sbjct: 5 IIVIGDSNVGKTCLTYRFCAGR 26
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 25.3 bits (54), Expect = 6.9
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 95 IVISGPSGVGKDTVIKKLRESR 116
+V G VGK ++I +
Sbjct: 3 LVFLGEQSVGKTSLITRFMYDS 24
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 25.4 bits (54), Expect = 7.0
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 90 PNPLIIVISGPSGVGKDTVIKKLRESR 116
P + V+ G VGK ++ +
Sbjct: 3 PQAIKCVVVGDGAVGKTCLLISYTTNA 29
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 25.3 bits (54), Expect = 7.0
Identities = 5/22 (22%), Positives = 10/22 (45%)
Query: 95 IVISGPSGVGKDTVIKKLRESR 116
+++ G GVGK + +
Sbjct: 7 VIMVGSGGVGKSALTLQFMYDE 28
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 710
Score = 25.9 bits (56), Expect = 7.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 95 IVISGPSGVGKDTVIKKL 112
I+ +G SG GK KK+
Sbjct: 94 ILCTGESGAGKTENTKKV 111
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 25.2 bits (54), Expect = 7.2
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRP 132
+I G +GVGK ++ + + R +T
Sbjct: 6 YIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGAR 43
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 25.7 bits (56), Expect = 7.3
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 94 IIVISGPSGVGKDTVIKKL 112
I+ + GP+G GK T++ ++
Sbjct: 27 ILHLVGPNGAGKSTLLARM 45
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 25.3 bits (54), Expect = 7.5
Identities = 6/30 (20%), Positives = 15/30 (50%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVT 124
+++ G GVGK +++ + ++ T
Sbjct: 9 VILLGDGGVGKSSLMNRYVTNKFDTQLFHT 38
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId:
2336]}
Length = 308
Score = 25.4 bits (54), Expect = 7.9
Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 11/115 (9%)
Query: 89 PPNPLIIVISGPSGVGKDTVIKKLRESRDSLHFVV-TATSRPMRPGEVNGKDYFFVSKEE 147
+ + I GP+G GK +I D++ +V + + +R E K + E
Sbjct: 21 GFSDRVTAIVGPNGSGKSNII-------DAIKWVFGEQSKKELRASE---KFDMIFAGSE 70
Query: 148 FLQMVDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILG 202
L + G+ + ++ R Y V ++ R G
Sbjct: 71 NLPPAGSAYVELVFEENGEEITVARELKRTGENTYYLNGSPVRLKDIRDRFAGTG 125
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium
discoideum, class-I myosin MyoE [TaxId: 44689]}
Length = 684
Score = 25.4 bits (55), Expect = 9.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 95 IVISGPSGVGKDTVIKKL 112
++ISG SG GK KK+
Sbjct: 89 VIISGESGAGKTEASKKI 106
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 25.2 bits (55), Expect = 9.4
Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 18/110 (16%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEV--NGKDYFFVSKEEFLQM 151
+ I GPSG GK T++ + + T GEV + + +E ++
Sbjct: 33 FVSIMGPSGSGKSTMLN-------IIGCLDKPTE-----GEVYIDNIKTNDLDDDELTKI 80
Query: 152 VDKNELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRIL 201
V+ + IP E + R + G +R L
Sbjct: 81 RRDK----IGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRAL 126
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 25.2 bits (55), Expect = 9.7
Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 31/101 (30%)
Query: 94 IIVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRP--GEV--NGKDYFFVSKEEFL 149
I + G SG GK T+I+ + RP G V +G++ +S+ E
Sbjct: 33 IYGVIGASGAGKSTLIR--------------CVNLLERPTEGSVLVDGQELTTLSESELT 78
Query: 150 Q-------MVDKNELLEYALVYGD------YKGIPKKQIRE 177
+ + LL V+G+ PK +++
Sbjct: 79 KARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKR 119
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB
{Thermotoga maritima [TaxId: 2336]}
Length = 238
Score = 25.3 bits (54), Expect = 9.8
Identities = 34/190 (17%), Positives = 69/190 (36%), Gaps = 26/190 (13%)
Query: 95 IVISGPSGVGKDTVIKKLRESRDSLHFVVTATSRPMRPGEVNGKDYFFVSKEEFLQMVDK 154
++++GP G+GK T+ + + V TS P+ + + + + +D+
Sbjct: 38 VLLAGPPGLGKTTLAHIIASELQTNIHV---TSGPVLVKQGDMAAILTSLERGDVLFIDE 94
Query: 155 NELLEYALVYGDYKGIPKKQIREYMAKGYDIVLRVDIQGARTLRRILGDSAVFVFLAAES 214
L A+ Y I QI + KG A+++R D F + A +
Sbjct: 95 IHRLNKAVEELLYSAIEDFQIDIMIGKG---------PSAKSIRI---DIQPFTLVGATT 142
Query: 215 EMALVER-----------LVERKTENREELLVRIATAREEVQHVKNFDYVVVNAEGKLDS 263
L+ L + +E++ R A+ + + + + G
Sbjct: 143 RSGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRGTPRI 202
Query: 264 AVKLVESVID 273
A++L + V D
Sbjct: 203 AIRLTKRVRD 212
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.135 0.372
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,025,990
Number of extensions: 48995
Number of successful extensions: 440
Number of sequences better than 10.0: 1
Number of HSP's gapped: 423
Number of HSP's successfully gapped: 197
Length of query: 286
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 202
Effective length of database: 1,254,276
Effective search space: 253363752
Effective search space used: 253363752
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)