Your job contains 1 sequence.
>043265
DLNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDG
VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA
REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDL
DQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIV
RDKTT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043265
(245 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040135 - symbol:MEF8 "AT2G25580" species:3702... 191 3.5e-34 3
TAIR|locus:2125899 - symbol:AT4G33170 species:3702 "Arabi... 237 1.3e-33 2
TAIR|locus:2049562 - symbol:AT2G01510 "AT2G01510" species... 193 2.2e-33 3
TAIR|locus:2055919 - symbol:AT2G22070 "AT2G22070" species... 227 2.9e-33 2
TAIR|locus:2178188 - symbol:MEF7 "AT5G09950" species:3702... 206 7.1e-33 3
TAIR|locus:2126352 - symbol:AT4G37380 species:3702 "Arabi... 216 1.3e-32 2
TAIR|locus:2056794 - symbol:REME1 "required for efficienc... 202 2.3e-32 2
TAIR|locus:2154855 - symbol:AT5G66520 "AT5G66520" species... 193 1.3e-31 2
TAIR|locus:2140235 - symbol:AT4G02750 species:3702 "Arabi... 208 2.4e-31 2
TAIR|locus:2157368 - symbol:AT5G50990 "AT5G50990" species... 206 2.7e-31 2
TAIR|locus:2027554 - symbol:AT1G56690 species:3702 "Arabi... 213 3.5e-31 2
TAIR|locus:2198546 - symbol:AT1G20230 "AT1G20230" species... 188 3.8e-31 3
TAIR|locus:2032840 - symbol:AT1G16480 "AT1G16480" species... 198 1.1e-30 2
TAIR|locus:2081635 - symbol:AT3G62890 species:3702 "Arabi... 201 3.3e-30 2
TAIR|locus:2154389 - symbol:LPA66 "LOW PSII ACCUMULATION ... 214 3.6e-30 2
TAIR|locus:1009023396 - symbol:AT5G40405 "AT5G40405" spec... 189 4.6e-30 2
TAIR|locus:2097365 - symbol:AT3G49710 "AT3G49710" species... 176 4.6e-30 3
TAIR|locus:4010713895 - symbol:AT4G21065 "AT4G21065" spec... 192 5.2e-30 2
TAIR|locus:2130389 - symbol:LOI1 "lovastatin insensitive ... 198 1.6e-29 2
TAIR|locus:2096414 - symbol:AT3G03580 species:3702 "Arabi... 184 1.8e-29 2
TAIR|locus:2131939 - symbol:MEF29 "AT4G30700" species:370... 209 1.9e-29 2
TAIR|locus:2077878 - symbol:AT3G08820 "AT3G08820" species... 222 2.9e-29 2
TAIR|locus:2202074 - symbol:CRR22 "CHLORORESPIRATORY REDU... 195 7.1e-29 3
TAIR|locus:2164880 - symbol:EMB2744 "EMBRYO DEFECTIVE 274... 194 3.4e-28 2
TAIR|locus:2012295 - symbol:AT1G09410 species:3702 "Arabi... 204 6.5e-28 2
TAIR|locus:2119440 - symbol:AT4G13650 species:3702 "Arabi... 187 6.9e-28 2
TAIR|locus:2170548 - symbol:AT5G40410 species:3702 "Arabi... 192 7.0e-28 2
TAIR|locus:2025946 - symbol:CRR28 "CHLORORESPIRATORY REDU... 176 7.2e-28 2
TAIR|locus:2183931 - symbol:AT5G13230 species:3702 "Arabi... 192 1.4e-27 2
TAIR|locus:2130354 - symbol:AT4G14820 "AT4G14820" species... 181 1.7e-27 2
TAIR|locus:2056740 - symbol:OTP85 "ORGANELLE TRANSCRIPT P... 194 1.8e-27 2
TAIR|locus:2090990 - symbol:AT3G14330 species:3702 "Arabi... 179 5.3e-27 3
TAIR|locus:2034456 - symbol:AT1G31920 species:3702 "Arabi... 194 5.9e-27 2
TAIR|locus:2144143 - symbol:AT5G06540 species:3702 "Arabi... 189 1.1e-26 2
TAIR|locus:2102514 - symbol:AT3G56550 species:3702 "Arabi... 177 1.2e-26 2
TAIR|locus:2019160 - symbol:AT1G74630 species:3702 "Arabi... 169 1.4e-26 2
TAIR|locus:2091546 - symbol:AT3G13770 species:3702 "Arabi... 203 2.0e-26 3
TAIR|locus:2103483 - symbol:OTP84 "ORGANELLE TRANSCRIPT P... 185 3.3e-26 2
TAIR|locus:2060640 - symbol:OTP81 "ORGANELLE TRANSCRIPT P... 192 3.8e-26 2
TAIR|locus:2057574 - symbol:AT2G33760 species:3702 "Arabi... 183 6.3e-26 2
TAIR|locus:2078653 - symbol:AT3G02010 species:3702 "Arabi... 190 6.8e-26 2
TAIR|locus:2131631 - symbol:AT4G35130 "AT4G35130" species... 171 5.5e-25 3
TAIR|locus:2148101 - symbol:AT5G16860 "AT5G16860" species... 203 7.7e-25 2
TAIR|locus:2080727 - symbol:MEF10 "mitochondrial RNA edit... 169 9.6e-25 2
TAIR|locus:505006130 - symbol:AT1G18485 species:3702 "Ara... 187 1.2e-24 2
TAIR|locus:2038603 - symbol:AT2G27610 "AT2G27610" species... 236 1.5e-24 2
TAIR|locus:2130644 - symbol:AT4G15720 "AT4G15720" species... 177 4.7e-24 2
TAIR|locus:2124137 - symbol:DOT4 "DEFECTIVELY ORGANIZED T... 189 3.0e-23 3
TAIR|locus:2013079 - symbol:AT1G19720 "AT1G19720" species... 174 7.6e-23 3
TAIR|locus:2053659 - symbol:AT2G15690 "AT2G15690" species... 269 1.5e-22 1
TAIR|locus:2102852 - symbol:CRR2 "AT3G46790" species:3702... 193 2.9e-22 3
TAIR|locus:2167593 - symbol:AT5G44230 species:3702 "Arabi... 166 3.7e-22 2
TAIR|locus:2177537 - symbol:EMB3141 "AT5G50390" species:3... 175 4.3e-22 2
TAIR|locus:2150936 - symbol:AT5G15340 species:3702 "Arabi... 165 8.7e-22 2
TAIR|locus:2150690 - symbol:EMB175 "AT5G03800" species:37... 182 2.5e-21 3
TAIR|locus:2098901 - symbol:AT3G61170 species:3702 "Arabi... 181 6.3e-21 2
TAIR|locus:2013738 - symbol:AT1G29710 "AT1G29710" species... 145 8.7e-21 3
TAIR|locus:2032955 - symbol:AT1G25360 "AT1G25360" species... 220 1.2e-19 2
TAIR|locus:2127826 - symbol:MEF8S "MEF8 similar" species:... 170 1.6e-19 2
TAIR|locus:2205425 - symbol:AT1G68930 "AT1G68930" species... 218 2.6e-19 2
TAIR|locus:2825364 - symbol:AT1G71420 "AT1G71420" species... 154 3.3e-19 2
TAIR|locus:2183886 - symbol:RARE1 "REQUIRED FOR ACCD RNA ... 161 3.6e-19 2
TAIR|locus:2205200 - symbol:OTP82 "AT1G08070" species:370... 206 1.9e-18 2
TAIR|locus:2129361 - symbol:AT4G14050 species:3702 "Arabi... 231 2.2e-18 1
TAIR|locus:2115130 - symbol:AT4G37170 "AT4G37170" species... 211 3.8e-18 2
TAIR|locus:2079187 - symbol:AT3G47530 "AT3G47530" species... 193 8.4e-18 2
TAIR|locus:2118964 - symbol:EMB2758 "embryo defective 275... 208 8.6e-18 2
TAIR|locus:2010652 - symbol:AT1G04840 "AT1G04840" species... 225 1.1e-17 1
TAIR|locus:2151501 - symbol:AT5G46460 species:3702 "Arabi... 224 1.6e-17 1
TAIR|locus:4010713776 - symbol:AT3G26782 species:3702 "Ar... 209 2.8e-17 2
TAIR|locus:2149664 - symbol:MEF1 "mitochondrial RNA editi... 218 5.1e-17 1
TAIR|locus:2082886 - symbol:EMB2261 "embryo defective 226... 199 2.8e-16 2
TAIR|locus:2019105 - symbol:AT1G74400 "AT1G74400" species... 177 2.0e-15 2
TAIR|locus:2122551 - symbol:AT4G39530 species:3702 "Arabi... 189 3.9e-15 2
TAIR|locus:2198811 - symbol:MEF3 "AT1G06140" species:3702... 183 4.8e-15 2
TAIR|locus:2019130 - symbol:OTP87 "organelle transcript p... 180 2.1e-14 2
TAIR|locus:2083631 - symbol:AT3G15130 "AT3G15130" species... 168 2.7e-14 2
TAIR|locus:2040565 - symbol:AT2G36730 species:3702 "Arabi... 186 1.1e-13 1
TAIR|locus:2141171 - symbol:AT4G21300 species:3702 "Arabi... 187 2.0e-13 1
TAIR|locus:2155740 - symbol:AT5G65570 species:3702 "Arabi... 186 2.1e-13 1
TAIR|locus:2064828 - symbol:AT2G40720 species:3702 "Arabi... 166 2.1e-13 2
TAIR|locus:2018668 - symbol:AT1G28690 species:3702 "Arabi... 183 2.4e-13 1
TAIR|locus:2083961 - symbol:AT3G53360 "AT3G53360" species... 184 3.6e-13 1
TAIR|locus:2010012 - symbol:AT1G13410 "AT1G13410" species... 175 1.5e-12 1
TAIR|locus:2094812 - symbol:AT3G29230 "AT3G29230" species... 176 1.8e-12 1
TAIR|locus:2150996 - symbol:AT5G15300 "AT5G15300" species... 175 2.0e-12 1
TAIR|locus:2054131 - symbol:SLO2 "AT2G13600" species:3702... 176 2.3e-12 1
TAIR|locus:2117084 - symbol:AT4G18840 "AT4G18840" species... 174 2.5e-12 1
TAIR|locus:2161018 - symbol:AT5G56310 "AT5G56310" species... 173 3.0e-12 1
TAIR|locus:2170877 - symbol:AT5G43790 species:3702 "Arabi... 167 2.1e-11 1
TAIR|locus:2202790 - symbol:AT1G26900 species:3702 "Arabi... 165 1.3e-10 1
TAIR|locus:2054789 - symbol:MEF21 "mitochondrial editing ... 155 1.7e-10 2
TAIR|locus:2195980 - symbol:AT1G77170 "AT1G77170" species... 161 4.8e-10 1
TAIR|locus:4515103421 - symbol:AT4G19191 "AT4G19191" spec... 162 5.9e-10 1
TAIR|locus:2196583 - symbol:ECB2 "EARLY CHLOROPLAST BIOGE... 150 7.2e-10 2
TAIR|locus:2090444 - symbol:AT3G22150 "AT3G22150" species... 160 1.1e-09 2
TAIR|locus:2198678 - symbol:PDE247 "pigment defective 247... 159 1.2e-09 1
TAIR|locus:2825379 - symbol:AT1G71490 "AT1G71490" species... 158 1.5e-09 2
TAIR|locus:2049736 - symbol:AT2G37320 "AT2G37320" species... 158 1.6e-09 1
TAIR|locus:505006163 - symbol:AT1G32415 "AT1G32415" speci... 160 1.6e-09 1
WARNING: Descriptions of 53 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2040135 [details] [associations]
symbol:MEF8 "AT2G25580" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR PROSITE:PS51375 EMBL:AC006053
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AK175894 IPI:IPI00529047
PIR:B84650 RefSeq:NP_180129.2 UniGene:At.52914
ProteinModelPortal:Q680H3 PRIDE:Q680H3 EnsemblPlants:AT2G25580.1
GeneID:817097 KEGG:ath:AT2G25580 GeneFarm:3521 TAIR:At2g25580
eggNOG:NOG235837 HOGENOM:HOG000115621 InParanoid:Q680H3 OMA:HSERIAF
PhylomeDB:Q680H3 ProtClustDB:CLSN2918900 Genevestigator:Q680H3
Uniprot:Q680H3
Length = 615
Score = 191 (72.3 bits), Expect = 3.5e-34, Sum P(3) = 3.5e-34
Identities = 36/85 (42%), Positives = 54/85 (63%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
RF+ +G P+ F G+ ACG G VDEG HFES++RDY I P++E ++ +V++Y
Sbjct: 345 RFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALP 404
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
+ EA EF+ M ++ + VWETL
Sbjct: 405 GFLDEALEFVERMPMEPNVDVWETL 429
Score = 168 (64.2 bits), Expect = 3.5e-34, Sum P(3) = 3.5e-34
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
+ GY+ T L D+DQE+KE SER+A A ++++ P + + KNLR+C +CHN
Sbjct: 521 EVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHN 580
Query: 226 FIKKLSSIENREIIVRD 242
+K +S I RE+I RD
Sbjct: 581 ALKIMSDIVGREVITRD 597
Score = 67 (28.6 bits), Expect = 3.5e-34, Sum P(3) = 3.5e-34
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 1 DLNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMD 46
D+ E C + V+ AL M+KL+ G +D +++L +C +
Sbjct: 137 DMIMEFDEYCIQENVRVALTTMEKLEKKGYVMDFVRLLKLTQLCRE 182
Score = 58 (25.5 bits), Expect = 3.0e-33, Sum P(3) = 3.0e-33
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 5 ELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK 54
E C+ +VK AL +D L ++ +D ++ L +C + + L+ K
Sbjct: 225 EYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAK 274
Score = 52 (23.4 bits), Expect = 9.7e-17, Sum P(3) = 9.7e-17
Identities = 25/124 (20%), Positives = 54/124 (43%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK-RFEN---D-GVRPNWSTFVGVI 72
A+++ + K G D + C L ++ G FE+ D G+ P+ +V ++
Sbjct: 339 AIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLV 398
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK---IAEAREFIRNMQI 129
G +DE + E + + +++ E + + ++G L+ AE EF+ ++
Sbjct: 399 EMYALPGFLDEALEFVERMPMEPNVD-VWETLMNLSRVHGNLELGDYCAEVVEFLDPTRL 457
Query: 130 DASS 133
+ S
Sbjct: 458 NKQS 461
Score = 38 (18.4 bits), Expect = 3.6e-31, Sum P(3) = 3.6e-31
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 5 ELKHLCREREVKAALEVMDKLK 26
+L LCRE V + V+++ K
Sbjct: 175 KLTQLCREGNVYYEVSVLEEAK 196
>TAIR|locus:2125899 [details] [associations]
symbol:AT4G33170 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161583 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AL035525 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00529412 PIR:T05197 RefSeq:NP_195043.1 UniGene:At.65446
ProteinModelPortal:Q9SMZ2 SMR:Q9SMZ2 PRIDE:Q9SMZ2
EnsemblPlants:AT4G33170.1 GeneID:829454 KEGG:ath:AT4G33170
GeneFarm:3439 TAIR:At4g33170 eggNOG:NOG285302 InParanoid:Q9SMZ2
OMA:SGILDMY PhylomeDB:Q9SMZ2 ProtClustDB:CLSN2685477
Genevestigator:Q9SMZ2 Uniprot:Q9SMZ2
Length = 990
Score = 237 (88.5 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 40/78 (51%), Positives = 60/78 (76%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K GY+P T++ L D+++E KE+ Y SE+LAVA+GL+STPP +R+ KNLR+CG+CH
Sbjct: 895 KQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCH 954
Query: 225 NFIKKLSSIENREIIVRD 242
N +K ++ + NREI++RD
Sbjct: 955 NAMKYIAKVYNREIVLRD 972
Score = 169 (64.5 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 31/90 (34%), Positives = 55/90 (61%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+ K+ ++ G++P+ TF+GV++AC G V E ++H S+ DY I P +EH+ + D
Sbjct: 704 LQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLAD 763
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
GR + +A I +M ++AS+ ++ TL
Sbjct: 764 ALGRAGLVKQAENLIESMSMEASASMYRTL 793
Score = 71 (30.1 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 26/97 (26%), Positives = 46/97 (47%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLL-EAGKRFEN--- 58
N+ L L + E K L++ ++K++GI D I +L+ C L+ EA K +
Sbjct: 688 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG 747
Query: 59 D-GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD 94
D G++P + + A G G V + ES++ +
Sbjct: 748 DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSME 784
Score = 70 (29.7 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLG 106
K L+ G R + T V CG A+++G Q H ++ YD++ + G
Sbjct: 500 KTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS--G 557
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
I+D+Y + ++ A+ ++ + V W T+
Sbjct: 558 ILDMYVKCGDMSAAQFAFDSIPVP-DDVAWTTM 589
Score = 50 (22.7 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 27/136 (19%), Positives = 58/136 (42%)
Query: 5 ELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPN 64
++K + + E++ + K + +L S LL D+ E+D V +
Sbjct: 264 QVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADM--------VESD-VECD 314
Query: 65 WSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREF 123
TF+ ++ ++ G Q H ++ D+ T+ + L +++Y +L+K AR
Sbjct: 315 QVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSL--INMYCKLRKFGFARTV 372
Query: 124 IRNMQIDASSVVWETL 139
NM + + W ++
Sbjct: 373 FDNMS-ERDLISWNSV 387
>TAIR|locus:2049562 [details] [associations]
symbol:AT2G01510 "AT2G01510" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR PROSITE:PS51375 EMBL:AC005560
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569
IPI:IPI00535832 PIR:F84425 RefSeq:NP_178260.1 UniGene:At.66150
ProteinModelPortal:Q9ZVF4 SMR:Q9ZVF4 PaxDb:Q9ZVF4 PRIDE:Q9ZVF4
EnsemblPlants:AT2G01510.1 GeneID:814680 KEGG:ath:AT2G01510
GeneFarm:3359 TAIR:At2g01510 eggNOG:NOG303667 InParanoid:Q9ZVF4
OMA:AYSSVEF PhylomeDB:Q9ZVF4 ProtClustDB:CLSN2683536
Genevestigator:Q9ZVF4 Uniprot:Q9ZVF4
Length = 584
Score = 193 (73.0 bits), Expect = 2.2e-33, Sum P(3) = 2.2e-33
Identities = 38/81 (46%), Positives = 54/81 (66%)
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
K + GY+P T V D++ E KE ++ SE+LA+A+GLI PG +R+ KNLR C +
Sbjct: 487 KIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDD 546
Query: 223 CHNFIKKLSSIENREIIVRDK 243
CH F K +SS+ + EII+RDK
Sbjct: 547 CHAFSKFVSSLTSTEIIMRDK 567
Score = 173 (66.0 bits), Expect = 2.2e-33, Sum P(3) = 2.2e-33
Identities = 34/85 (40%), Positives = 54/85 (63%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDIN--PTLEHFLGIVDLYGRL 114
+N+G+RPN+ TF+GV++AC G V+EG ++F + + D N P EH+ +VDL GR
Sbjct: 303 QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRS 362
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
+ EA EFI+ M ++ + +W L
Sbjct: 363 GLLEEAYEFIKKMPVEPDTGIWGAL 387
Score = 62 (26.9 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 19/82 (23%), Positives = 41/82 (50%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHFLGIVDLYGRLQKI 117
D V+ + T V +++ACG G+++ G + ++ ++ D N +E+ +D++ +
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVEN--ARLDMHLKCGNT 261
Query: 118 AEAREFIRNMQIDASSVVWETL 139
AR M+ + V W T+
Sbjct: 262 EAARVLFEEMK-QRNVVSWSTM 282
Score = 53 (23.7 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 17/88 (19%), Positives = 39/88 (44%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF------END-GVRPNWSTF 68
+ AL + ++N G+ + + +L+ C L+ GKR+ ND + P +
Sbjct: 293 REALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHY 352
Query: 69 VGVITACGCFGAVDEGFQHFESVTRDYD 96
++ G G ++E ++ + + + D
Sbjct: 353 ACMVDLLGRSGLLEEAYEFIKKMPVEPD 380
Score = 53 (23.7 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 27/119 (22%), Positives = 48/119 (40%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGC 77
A +V D++ IFL + + + + L K+ + GVRP+ T+ V+ A
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 78 FGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVW 136
G GF V + Y +V +Y + +++ A +MQ+ V W
Sbjct: 122 LGDFSCGFALHAHVVK-YGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK-DLVAW 178
Score = 51 (23.0 bits), Expect = 2.2e-33, Sum P(3) = 2.2e-33
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK 54
ALE +K+ + DS ++ +L+ C L LE G+
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGE 230
>TAIR|locus:2055919 [details] [associations]
symbol:AT2G22070 "AT2G22070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR019734 Pfam:PF13176
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AC007232 Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00546911
PIR:F84608 RefSeq:NP_179798.1 UniGene:At.39486
ProteinModelPortal:Q9SHZ8 SMR:Q9SHZ8 EnsemblPlants:AT2G22070.1
GeneID:816742 KEGG:ath:AT2G22070 GeneFarm:3362 TAIR:At2g22070
eggNOG:NOG294209 InParanoid:Q9SHZ8 OMA:SHYACMV PhylomeDB:Q9SHZ8
ProtClustDB:CLSN2683727 Genevestigator:Q9SHZ8 Uniprot:Q9SHZ8
Length = 786
Score = 227 (85.0 bits), Expect = 2.9e-33, Sum P(2) = 2.9e-33
Identities = 45/80 (56%), Positives = 57/80 (71%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K GY+P T VL DL++E KE+ + SE+LA+A+GLISTP TLRI KNLR+C +CH
Sbjct: 691 KKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCH 750
Query: 225 NFIKKLSSIENREIIVRDKT 244
IK +S + REIIVRD T
Sbjct: 751 TAIKFISKLVGREIIVRDTT 770
Score = 173 (66.0 bits), Expect = 2.9e-33, Sum P(2) = 2.9e-33
Identities = 40/93 (43%), Positives = 59/93 (63%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD-INPTLEHFLG 106
EA + FE +G+RP+ T+VGV +AC G V++G Q+F+ + +D D I PTL H+
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMM-KDVDKIIPTLSHYAC 556
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+VDL+GR + EA+EFI M I+ V W +L
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSL 589
Score = 53 (23.7 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 23/125 (18%), Positives = 51/125 (40%)
Query: 22 MDKLKNIGIFLDSPDIIELLNVCMDLKLL----EAGKRFEN---DGVRPNWSTFVGVITA 74
M++ KNI + L D++ + + + EA F + G RPN T +++
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSV 422
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
++ G Q S + +I ++ ++ +Y + I A ++ + +V
Sbjct: 423 ASSLASLSHGKQIHGSAVKSGEIY-SVSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481
Query: 135 VWETL 139
W ++
Sbjct: 482 SWTSM 486
Score = 51 (23.0 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 17/94 (18%), Positives = 40/94 (42%)
Query: 9 LCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRP 63
L + + ALE+ + + G+ D + + + C L+ G+++ + D + P
Sbjct: 490 LAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIP 549
Query: 64 NWSTFVGVITACGCFGAVDEGFQHFESVTRDYDI 97
S + ++ G G + E + E + + D+
Sbjct: 550 TLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDV 583
>TAIR|locus:2178188 [details] [associations]
symbol:MEF7 "AT5G09950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009451 "RNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB016893 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 GO:GO:0009451
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00524906
RefSeq:NP_196557.1 UniGene:At.65502 ProteinModelPortal:Q9FIB2
SMR:Q9FIB2 PaxDb:Q9FIB2 PRIDE:Q9FIB2 EnsemblPlants:AT5G09950.1
GeneID:830856 KEGG:ath:AT5G09950 GeneFarm:3357 TAIR:At5g09950
eggNOG:NOG278872 InParanoid:Q9FIB2 OMA:SGYIHNE PhylomeDB:Q9FIB2
ProtClustDB:CLSN2687521 Genevestigator:Q9FIB2 Uniprot:Q9FIB2
Length = 995
Score = 206 (77.6 bits), Expect = 7.1e-33, Sum P(3) = 7.1e-33
Identities = 42/82 (51%), Positives = 59/82 (71%)
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL--RIKKNLRIC 220
K +DAGY+P T + L DL+QE KE+ +Y SE+LAVA+ +++ TL RI KNLR+C
Sbjct: 897 KMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAF-VLAAQRSSTLPIRIMKNLRVC 955
Query: 221 GECHNFIKKLSSIENREIIVRD 242
G+CH+ K +S IE R+II+RD
Sbjct: 956 GDCHSAFKYISKIEGRQIILRD 977
Score = 175 (66.7 bits), Expect = 7.1e-33, Sum P(3) = 7.1e-33
Identities = 36/93 (38%), Positives = 57/93 (61%)
Query: 51 EAGKRFEN---DG-VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
EA K FE DG P+ TFVGV++AC G ++EGF+HFES++ Y + P +EHF
Sbjct: 703 EALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSC 762
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+ D+ GR ++ + +FI M + + ++W T+
Sbjct: 763 MADVLGRAGELDKLEDFIEKMPMKPNVLIWRTV 795
Score = 54 (24.1 bits), Expect = 1.7e-22, Sum P(4) = 1.7e-22
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 106 GIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
G+V++Y + IA+AR M D SV W ++
Sbjct: 354 GLVNMYAKCGSIADARRVFYFMT-DKDSVSWNSM 386
Score = 49 (22.3 bits), Expect = 7.3e-20, Sum P(3) = 7.3e-20
Identities = 25/110 (22%), Positives = 49/110 (44%)
Query: 39 ELLNVCMDLK--LLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDY 95
ELL +DL +L+ G+R ++ + V++A ++ G + H SV
Sbjct: 598 ELLAKALDLVWFMLQTGQRLDS-------FMYATVLSAFASVATLERGMEVHACSVRACL 650
Query: 96 DINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL-EKYAQ 144
+ + + L VD+Y + ++ A F M + +S W ++ YA+
Sbjct: 651 ESDVVVGSAL--VDMYSKCGRLDYALRFFNTMPV-RNSYSWNSMISGYAR 697
Score = 43 (20.2 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDE--GFQ-HFESVTRDYDINPTLEHFLGIVDLYGR-L 114
+G+ N FV V+ AC G+V G Q H Y ++ + + L + +Y + +
Sbjct: 96 EGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL--ISMYWKCI 153
Query: 115 QKIAEAREFIRNMQIDASSVVWETL-EKYAQ 144
+ A ++++ +SV W ++ Y+Q
Sbjct: 154 GSVGYALCAFGDIEVK-NSVSWNSIISVYSQ 183
Score = 41 (19.5 bits), Expect = 7.1e-33, Sum P(3) = 7.1e-33
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 11 REREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDL 47
R E K AL + + GIF + + +L C ++
Sbjct: 79 RNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEI 115
Score = 41 (19.5 bits), Expect = 4.8e-19, Sum P(3) = 4.8e-19
Identities = 18/79 (22%), Positives = 34/79 (43%)
Query: 50 LEAGKRFEND-GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIV 108
L+ RF N VR ++S + +I+ G +E + FE++ D P F+G++
Sbjct: 670 LDYALRFFNTMPVRNSYS-WNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVL 728
Query: 109 DLYGRLQKIAEAREFIRNM 127
+ E + +M
Sbjct: 729 SACSHAGLLEEGFKHFESM 747
Score = 38 (18.4 bits), Expect = 1.7e-22, Sum P(4) = 1.7e-22
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 59 DGVRPNWSTFVGVIT-AC 75
DG RP TF ++T AC
Sbjct: 200 DGSRPTEYTFGSLVTTAC 217
>TAIR|locus:2126352 [details] [associations]
symbol:AT4G37380 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161591
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL035601 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00520306 PIR:T04732 RefSeq:NP_195454.1 UniGene:At.65465
ProteinModelPortal:Q9SZT8 SMR:Q9SZT8 PaxDb:Q9SZT8 PRIDE:Q9SZT8
EnsemblPlants:AT4G37380.1 GeneID:829892 KEGG:ath:AT4G37380
GeneFarm:3434 TAIR:At4g37380 eggNOG:NOG309820 InParanoid:Q9SZT8
OMA:MITCYAK PhylomeDB:Q9SZT8 ProtClustDB:CLSN2685788
BioCyc:ARA:AT4G37830-MONOMER BioCyc:MetaCyc:AT4G37830-MONOMER
Genevestigator:Q9SZT8 Uniprot:Q9SZT8
Length = 632
Score = 216 (81.1 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K GY+P T VL+DL++ KE+ SERLA+AYGLIST PG L+I KNLR+C +CH
Sbjct: 537 KSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCH 596
Query: 225 NFIKKLSSIENREIIVRDK 243
K +S I R+I++RD+
Sbjct: 597 TVTKLISKITGRKIVMRDR 615
Score = 175 (66.7 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++P TF+G + AC G V+EG + FES+ ++Y I P +EH+ +V L GR ++
Sbjct: 356 GLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKR 415
Query: 120 AREFIRNMQIDASSVVWETL 139
A E I+NM +DA SV+W ++
Sbjct: 416 AYETIKNMNMDADSVLWSSV 435
Score = 62 (26.9 bits), Expect = 8.5e-21, Sum P(2) = 8.5e-21
Identities = 19/73 (26%), Positives = 34/73 (46%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
KLL GK +P+ T V ++AC GA++ G + + I ++ G+
Sbjct: 248 KLLAEGKP------KPDEITVVAALSACSQIGALETG-RWIHVFVKSSRIRLNVKVCTGL 300
Query: 108 VDLYGRLQKIAEA 120
+D+Y + + EA
Sbjct: 301 IDMYSKCGSLEEA 313
Score = 44 (20.5 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 14/65 (21%), Positives = 26/65 (40%)
Query: 33 DSPDIIELLNVCMDLKLLEAGKRF----ENDGVRPNWSTFVGVITACGCFGAVDEGFQHF 88
D ++ L+ C + LE G+ ++ +R N G+I G+++E F
Sbjct: 258 DEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVF 317
Query: 89 ESVTR 93
R
Sbjct: 318 NDTPR 322
>TAIR|locus:2056794 [details] [associations]
symbol:REME1 "required for efficiency of mitochondrial
editing 1" species:3702 "Arabidopsis thaliana" [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0009451 "RNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
GO:GO:0009451 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:AC007196 EMBL:BT003840 IPI:IPI00519155 PIR:C84453
RefSeq:NP_178481.1 UniGene:At.41363 ProteinModelPortal:Q9SI53
SMR:Q9SI53 PRIDE:Q9SI53 EnsemblPlants:AT2G03880.1 GeneID:814914
KEGG:ath:AT2G03880 GeneFarm:3431 TAIR:At2g03880 eggNOG:NOG254665
InParanoid:Q9SI53 OMA:FRSMKKL PhylomeDB:Q9SI53
ProtClustDB:CLSN2683857 Genevestigator:Q9SI53 Uniprot:Q9SI53
Length = 630
Score = 202 (76.2 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 37/75 (49%), Positives = 54/75 (72%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+P T +VL+DL+ E E + SE+LA+A+GL++ P + +RI+KNLRICG+CH F
Sbjct: 538 GYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFC 597
Query: 228 KKLSSIENREIIVRD 242
K S +E R I++RD
Sbjct: 598 KLASKLEIRSIVIRD 612
Score = 187 (70.9 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 41/139 (29%), Positives = 77/139 (55%)
Query: 2 LNSELKHL-CREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDG 60
LN+ L + C+ ++ AL V +++K + S I L + L+ +R ++ G
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+PN+ T VGV+ AC G +++G+ +F S+ + Y I+P EH+ ++DL G+ K+ +A
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDA 414
Query: 121 REFIRNMQIDASSVVWETL 139
+ + M+ + +V W TL
Sbjct: 415 VKLLNEMECEPDAVTWRTL 433
Score = 86 (35.3 bits), Expect = 2.6e-26, Sum P(3) = 2.6e-26
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG 53
L SE LC +R++ A++ MD L++ G++ DS EL+ C+ + + G
Sbjct: 29 LLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEG 80
Score = 65 (27.9 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 21/98 (21%), Positives = 42/98 (42%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
NS + + ALE+ ++K G + + +L C L LLE G + V+
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 63 PNWSTFVG---VITACGCFGAVDEGFQHFESVTRDYDI 97
+ + V C C G++++ + F + ++ D+
Sbjct: 289 YDQDLILNNALVDMYCKC-GSLEDALRVFNQM-KERDV 324
Score = 62 (26.9 bits), Expect = 2.6e-26, Sum P(3) = 2.6e-26
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K LE D VRPN T+ V+ +C G D H + + + + L
Sbjct: 145 KALELLVLMLRDNVRPNVYTYSSVLRSCN--GMSDVRMLHCGIIKEGLESDVFVRSAL-- 200
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+D++ +L + +A M + ++VW ++
Sbjct: 201 IDVFAKLGEPEDALSVFDEM-VTGDAIVWNSI 231
>TAIR|locus:2154855 [details] [associations]
symbol:AT5G66520 "AT5G66520" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB013389 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00529723
RefSeq:NP_201453.1 UniGene:At.55714 ProteinModelPortal:Q9FJY7
SMR:Q9FJY7 EnsemblPlants:AT5G66520.1 GeneID:836784
KEGG:ath:AT5G66520 GeneFarm:3455 TAIR:At5g66520 eggNOG:NOG260190
InParanoid:Q9FJY7 OMA:PHNAYTF PhylomeDB:Q9FJY7
ProtClustDB:CLSN2686844 Genevestigator:Q9FJY7 Uniprot:Q9FJY7
Length = 620
Score = 193 (73.0 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 38/83 (45%), Positives = 54/83 (65%)
Query: 163 KKKDAGYMPYTEYVLRDL-DQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
K ++ GY+P E +L DL D + +E SE+LA+ YGLI T PG +RI KNLR+C
Sbjct: 522 KLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCK 581
Query: 222 ECHNFIKKLSSIENREIIVRDKT 244
+CH K +S I R+I++RD+T
Sbjct: 582 DCHKVTKLISKIYKRDIVMRDRT 604
Score = 189 (71.6 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 37/82 (45%), Positives = 53/82 (64%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++PN TF V+TAC G V+EG F S+ RDY++ PT+EH+ IVDL GR + E
Sbjct: 343 GIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDE 402
Query: 120 AREFIRNMQIDASSVVWETLEK 141
A+ FI+ M + ++V+W L K
Sbjct: 403 AKRFIQEMPLKPNAVIWGALLK 424
Score = 84 (34.6 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 30/139 (21%), Positives = 61/139 (43%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
NS +K + ++ AL + K+ + I + M+ + L+ +N V
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG--IVDLYGRLQKIAEA 120
P+ + ++AC GA+++G + S I ++ LG ++D+Y + ++ EA
Sbjct: 245 PDNVSLANALSACAQLGALEQG-KWIHSYLNKTRIR--MDSVLGCVLIDMYAKCGEMEEA 301
Query: 121 REFIRNMQIDASSVVWETL 139
E +N++ S W L
Sbjct: 302 LEVFKNIK-KKSVQAWTAL 319
Score = 38 (18.4 bits), Expect = 7.4e-16, Sum P(2) = 7.4e-16
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 64 NWSTFVGVITACGCFGAVDEGFQHFESVTR 93
N TF ++ AC A +E Q +T+
Sbjct: 114 NAYTFPSLLKACSNLSAFEETTQIHAQITK 143
>TAIR|locus:2140235 [details] [associations]
symbol:AT4G02750 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161495 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC004044 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00548792 PIR:A85035
RefSeq:NP_192184.1 UniGene:At.50610 ProteinModelPortal:Q9SY02
SMR:Q9SY02 PRIDE:Q9SY02 EnsemblPlants:AT4G02750.1 GeneID:828187
KEGG:ath:AT4G02750 GeneFarm:3233 TAIR:At4g02750 eggNOG:NOG280862
InParanoid:Q9SY02 OMA:MYVLLSN PhylomeDB:Q9SY02
ProtClustDB:CLSN2685776 Genevestigator:Q9SY02 Uniprot:Q9SY02
Length = 781
Score = 208 (78.3 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 40/80 (50%), Positives = 55/80 (68%)
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
+ K AGY+ T VL D+++E KE+ Y SERLAVAYG++ GR +R+ KNLR+C +
Sbjct: 684 RMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCED 743
Query: 223 CHNFIKKLSSIENREIIVRD 242
CHN IK ++ I R II+RD
Sbjct: 744 CHNAIKYMARITGRLIILRD 763
Score = 174 (66.3 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 33/93 (35%), Positives = 58/93 (62%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
L+ E+ KR +G++P+ +T V V++AC G VD+G Q+F ++T+DY + P +H+
Sbjct: 495 LRFFESMKR---EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYAC 551
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+VDL GR + +A ++NM + + +W TL
Sbjct: 552 MVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTL 584
Score = 66 (28.3 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWST--FVG---VI 72
AL + +++ G L+ L+ C D+ LE GK+ V+ + T FVG ++
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452
Query: 73 TACGCFGAVDEGFQHFESV 91
C C G+++E F+ +
Sbjct: 453 MYCKC-GSIEEANDLFKEM 470
Score = 52 (23.4 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 115 QKIAEAREFIRNMQIDASSVVWETL-EKYAQT 145
+KI EAR+F +M + V W T+ YAQ+
Sbjct: 233 KKIVEARQFFDSMNV-RDVVSWNTIITGYAQS 263
>TAIR|locus:2157368 [details] [associations]
symbol:AT5G50990 "AT5G50990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR PROSITE:PS51375 EMBL:AB017063
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00536858 RefSeq:NP_199912.2 UniGene:At.65858
ProteinModelPortal:Q9FI49 SMR:Q9FI49 PaxDb:Q9FI49 PRIDE:Q9FI49
EnsemblPlants:AT5G50990.1 GeneID:835172 KEGG:ath:AT5G50990
GeneFarm:3452 TAIR:At5g50990 eggNOG:NOG294420 InParanoid:Q9FI49
OMA:RIRFHRF PhylomeDB:Q9FI49 ProtClustDB:CLSN2702263
Genevestigator:Q9FI49 Uniprot:Q9FI49
Length = 534
Score = 206 (77.6 bits), Expect = 2.7e-31, Sum P(2) = 2.7e-31
Identities = 37/81 (45%), Positives = 58/81 (71%)
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
K K G++ T+ VL D+ +E KE+ Y SE+LA+AY ++ + PG +RI+KN+R+C +
Sbjct: 437 KTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSD 496
Query: 223 CHNFIKKLSSIENREIIVRDK 243
CHN+IK +S + NR II+RD+
Sbjct: 497 CHNWIKAVSKLLNRVIIMRDR 517
Score = 170 (64.9 bits), Expect = 2.7e-31, Sum P(2) = 2.7e-31
Identities = 33/89 (37%), Positives = 55/89 (61%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
E + V P+ TF+G++T C G ++EG ++F ++R + I P LEH+ +VDL GR +
Sbjct: 258 EAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGR 317
Query: 117 IAEAREFIRNMQIDASSVVWETLEKYAQT 145
+ EA E I +M I+ V+W +L ++T
Sbjct: 318 VKEAYELIESMPIEPDVVIWRSLLSSSRT 346
Score = 68 (29.0 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 30/138 (21%), Positives = 59/138 (42%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
A+ V +++ + DS + LL C LLE GK + ++P + ++
Sbjct: 250 AIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMV 309
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLY-----GRL--QKIAEAR--EF 123
G G V E ++ ES+ + D+ L Y G + Q +++A+ ++
Sbjct: 310 DLLGRAGRVKEAYELIESMPIEPDV-VIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDY 368
Query: 124 IRNMQIDASSVVWETLEK 141
+ I +S+ WE+ +K
Sbjct: 369 VLLSNIYSSTKKWESAQK 386
Score = 62 (26.9 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
Identities = 18/80 (22%), Positives = 36/80 (45%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEG-FQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
++PN +F + AC G + + H + ++N L L VD+Y + I
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSAL--VDVYAKCGDIGT 218
Query: 120 AREFIRNMQIDASSVVWETL 139
+RE +++ + S+ W +
Sbjct: 219 SREVFYSVKRNDVSI-WNAM 237
>TAIR|locus:2027554 [details] [associations]
symbol:AT1G56690 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR004154
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 PROSITE:PS51375 SUPFAM:SSF52954 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC009323 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00523592 PIR:G96608 RefSeq:NP_176062.1 UniGene:At.66043
ProteinModelPortal:Q9FXB9 PaxDb:Q9FXB9 PRIDE:Q9FXB9
EnsemblPlants:AT1G56690.1 GeneID:842125 KEGG:ath:AT1G56690
GeneFarm:3461 TAIR:At1g56690 eggNOG:NOG302853 InParanoid:Q9FXB9
OMA:TNMIGGL PhylomeDB:Q9FXB9 ProtClustDB:CLSN2912806
Genevestigator:Q9FXB9 Uniprot:Q9FXB9
Length = 704
Score = 213 (80.0 bits), Expect = 3.5e-31, Sum P(2) = 3.5e-31
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
++AGY P +VL D+D+E K + SERLAVAYGL+ P G +R+ KNLR+CG+CH
Sbjct: 609 REAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCH 668
Query: 225 NFIKKLSSIENREIIVRD 242
IK +S + REII+RD
Sbjct: 669 AAIKLISKVTEREIILRD 686
Score = 166 (63.5 bits), Expect = 3.5e-31, Sum P(2) = 3.5e-31
Identities = 44/159 (27%), Positives = 73/159 (45%)
Query: 10 CREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFV 69
C E VKA L V D+ + I + + I + + + L+ + G PN T +
Sbjct: 379 CGEL-VKAKL-VFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLI 436
Query: 70 GVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQI 129
++TAC G ++EG + FES+ + + PT+EH+ VD+ GR ++ +A E I +M I
Sbjct: 437 AILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTI 496
Query: 130 DASSVVWETLEKYAQTXXXXXXXXXXXXXXXXNKKKDAG 168
+ VW L +T N+ +AG
Sbjct: 497 KPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAG 535
Score = 65 (27.9 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 19/96 (19%), Positives = 47/96 (48%)
Query: 46 DLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHF 104
+L+ L+ + + GVRP++ + + +++ C ++ G Q H V +D + +
Sbjct: 312 ELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASV 371
Query: 105 LGIVDLYGRLQKIAEAR-EFIRNMQIDASSVVWETL 139
L + +Y + ++ +A+ F R D ++W ++
Sbjct: 372 L--MTMYVKCGELVKAKLVFDRFSSKDI--IMWNSI 403
Score = 57 (25.1 bits), Expect = 8.6e-20, Sum P(2) = 8.6e-20
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
AL++ +++ G+ P +I +L+VC L L+ G++ VR
Sbjct: 315 ALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR 359
Score = 43 (20.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 113 RLQKIAEAREFIRNMQIDASSVVWETL 139
R+ KI EAR+F ++Q A W ++
Sbjct: 29 RIGKINEARKFFDSLQFKAIGS-WNSI 54
Score = 43 (20.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 30/136 (22%), Positives = 58/136 (42%)
Query: 9 LCREREVKAALEVMDKLKNIGIFLDSPDIIELL-NVCMDLKLLEAGKRFE--NDGVRPNW 65
LCRE V A + D+++ + + I N +D+ A K FE + +W
Sbjct: 182 LCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDV----ARKLFEVMPEKTEVSW 237
Query: 66 STFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIR 125
++ + T G +++ + FE + + P + IV +G + +I++AR
Sbjct: 238 TSMLLGYTLSG---RIEDAEEFFEVMP----MKPVIACNAMIVG-FGEVGEISKARRVFD 289
Query: 126 NMQIDASSVVWETLEK 141
M+ D + W + K
Sbjct: 290 LME-DRDNATWRGMIK 304
>TAIR|locus:2198546 [details] [associations]
symbol:AT1G20230 "AT1G20230" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC022472 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00518181 PIR:A86336 RefSeq:NP_173449.1 UniGene:At.41719
ProteinModelPortal:Q9LNU6 SMR:Q9LNU6 PRIDE:Q9LNU6
EnsemblPlants:AT1G20230.1 GeneID:838612 KEGG:ath:AT1G20230
GeneFarm:3206 TAIR:At1g20230 eggNOG:NOG298463 InParanoid:Q9LNU6
OMA:CHAVIKF PhylomeDB:Q9LNU6 ProtClustDB:CLSN2682959
Genevestigator:Q9LNU6 Uniprot:Q9LNU6
Length = 760
Score = 188 (71.2 bits), Expect = 3.8e-31, Sum P(3) = 3.8e-31
Identities = 34/78 (43%), Positives = 54/78 (69%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
+ +G+ P ++ L D++++ +E+ SE+LAV +GL++TP G L++ KNLRICG+CH
Sbjct: 665 RKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCH 724
Query: 225 NFIKKLSSIENREIIVRD 242
IK +SS REI +RD
Sbjct: 725 AVIKFISSYAGREIFIRD 742
Score = 166 (63.5 bits), Expect = 3.8e-31, Sum P(3) = 3.8e-31
Identities = 29/79 (36%), Positives = 51/79 (64%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
++P++ +F +++ACG G DEG+++F+ ++ +Y I P LEH+ +V+L GR K+ EA
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA 544
Query: 121 REFIRNMQIDASSVVWETL 139
+ I+ M + S VW L
Sbjct: 545 YDLIKEMPFEPDSCVWGAL 563
Score = 91 (37.1 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 32/141 (22%), Positives = 61/141 (43%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCM----DLKLLEAGKRFEN 58
N+ + L R V ALE+ + K + L+ ++ C D++ LE + +
Sbjct: 322 NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
GV+PN T ++ ACG A+ G R + ++ + ++D+Y + +I
Sbjct: 382 AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSALIDMYAKCGRI- 439
Query: 119 EAREFIRNMQIDASSVVWETL 139
+ + NM + V W +L
Sbjct: 440 NLSQIVFNMMPTKNLVCWNSL 460
Score = 47 (21.6 bits), Expect = 3.8e-31, Sum P(3) = 3.8e-31
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR 55
++ V ++ + G+ DS + L VC +L + GK+
Sbjct: 100 SIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQ 137
>TAIR|locus:2032840 [details] [associations]
symbol:AT1G16480 "AT1G16480" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 IPI:IPI00519279 RefSeq:NP_173097.2 UniGene:At.11325
ProteinModelPortal:F4I4G1 SMR:F4I4G1 EnsemblPlants:AT1G16480.1
GeneID:838218 KEGG:ath:AT1G16480 OMA:DEEQKEH ArrayExpress:F4I4G1
Uniprot:F4I4G1
Length = 937
Score = 198 (74.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K++GY+ T L+D D+E KE SERLA+AY L+STP G T+RI KNLRIC +CH
Sbjct: 842 KESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCH 901
Query: 225 NFIKKLSSIENREIIVRDK 243
+ K +S + R I++RD+
Sbjct: 902 SVYKFVSRVIGRRIVLRDQ 920
Score = 180 (68.4 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 30/80 (37%), Positives = 51/80 (63%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++P TFV ++TAC G VD+G +++ + RD+ + P +EH + ++DL GR ++AE
Sbjct: 661 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 720
Query: 120 AREFIRNMQIDASSVVWETL 139
A FI M + + +VW +L
Sbjct: 721 AETFISKMPMKPNDLVWRSL 740
Score = 66 (28.3 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 24/101 (23%), Positives = 49/101 (48%)
Query: 40 LLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAV-DEGFQHFESVTRDYDIN 98
++ V + L+ +E ++ + G++P+ ++TACG G++ EG Q V + ++
Sbjct: 33 IVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLS 92
Query: 99 PTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
I+ LYG ++ +R+ M D + V W +L
Sbjct: 93 DVYVS-TAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSL 131
Score = 57 (25.1 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEG-FQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
+ G N+ TF + AC ++G H V N + + L V +YG++ +
Sbjct: 355 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNAL--VSMYGKIGE 412
Query: 117 IAEAREFIRNMQIDASSVV-WETL 139
++E+R + +Q+ VV W L
Sbjct: 413 MSESRRVL--LQMPRRDVVAWNAL 434
Score = 56 (24.8 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 18/94 (19%), Positives = 45/94 (47%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFG-AVDEGFQ-HFESVTRDYDINPTLEHFL 105
K L A + +GV N+ T V V++AC G ++ G H V+ ++ + +++ L
Sbjct: 446 KALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSL 505
Query: 106 GIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+ +Y + ++ +++ + + + + W +
Sbjct: 506 --ITMYAKCGDLSSSQDLFNGLD-NRNIITWNAM 536
Score = 49 (22.3 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 19/98 (19%), Positives = 42/98 (42%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
++++ K +GV N ++ VI++CG G Q V + + L +
Sbjct: 143 EVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS-GLESKLAVENSL 201
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEK-YAQ 144
+ + G + + A +I + + ++ W ++ YAQ
Sbjct: 202 ISMLGSMGNVDYAN-YIFDQMSERDTISWNSIAAAYAQ 238
>TAIR|locus:2081635 [details] [associations]
symbol:AT3G62890 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL162651 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK175128 IPI:IPI00527718 PIR:T48078 RefSeq:NP_191848.2
UniGene:At.51012 ProteinModelPortal:Q683I9 SMR:Q683I9
EnsemblPlants:AT3G62890.1 GeneID:825464 KEGG:ath:AT3G62890
GeneFarm:3529 TAIR:At3g62890 eggNOG:NOG281670 InParanoid:Q683I9
OMA:QESERIY PhylomeDB:Q683I9 ProtClustDB:CLSN2681595
Genevestigator:Q683I9 Uniprot:Q683I9
Length = 573
Score = 201 (75.8 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 39/78 (50%), Positives = 58/78 (74%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
++AGY+ T+ VL DL+++ KE +Y SE+LA+A+ L+ T PG +RI KNLRICG+CH
Sbjct: 478 REAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCH 537
Query: 225 NFIKKLSSIENREIIVRD 242
+K +S + +REI+VRD
Sbjct: 538 LVMKMISKLFSREIVVRD 555
Score = 166 (63.5 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+D + PN TFVG++ AC G ++EG +F+ + ++ I P+++H+ +VDLYGR I
Sbjct: 295 SDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLI 354
Query: 118 AEAREFIRNMQIDASSVVWETL 139
EA FI +M ++ ++W +L
Sbjct: 355 KEAESFIASMPMEPDVLIWGSL 376
Score = 81 (33.6 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 50 LEAGKRFEND-GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIV 108
LE KR N G + + + +I +G DE FQ F +T +INP F+GI+
Sbjct: 250 LERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGIL 309
Query: 109 DLYGRLQKIAEAREFIRNM 127
I E + + + M
Sbjct: 310 GACVHRGLINEGKSYFKMM 328
Score = 75 (31.5 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 20/83 (24%), Positives = 42/83 (50%)
Query: 39 ELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDIN 98
E L++ +++L + + F VRPN T V++ACG GA+++G + + Y +
Sbjct: 177 EALDLFREMQLPKPNEAF----VRPNEFTMSTVLSACGRLGALEQG-KWVHAYIDKYHVE 231
Query: 99 PTLEHFLGIVDLYGRLQKIAEAR 121
+ ++D+Y + + A+
Sbjct: 232 IDIVLGTALIDMYAKCGSLERAK 254
Score = 52 (23.4 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 21/95 (22%), Positives = 45/95 (47%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVR--PNWSTFVGVITACGCFGAVDEGFQHFESVTRD 94
++ + + C DL+ A + F++ G + P W++ V+ A G +D+ + F+ +
Sbjct: 103 LLNMYSSCGDLR--SAQRVFDDSGSKDLPAWNS---VVNAYAKAGLIDDARKLFDEMPER 157
Query: 95 YDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQI 129
I+ + +++ Y K EA + R MQ+
Sbjct: 158 NVISWSC-----LINGYVMCGKYKEALDLFREMQL 187
>TAIR|locus:2154389 [details] [associations]
symbol:LPA66 "LOW PSII ACCUMULATION 66" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009451 "RNA modification" evidence=IMP] [GO:0007020
"microtubule nucleation" evidence=RCA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AB017061
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 GO:GO:0009451
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AY056318 IPI:IPI00541515
RefSeq:NP_199702.1 UniGene:At.26336 ProteinModelPortal:Q9FI80
SMR:Q9FI80 PaxDb:Q9FI80 PRIDE:Q9FI80 EnsemblPlants:AT5G48910.1
GeneID:834949 KEGG:ath:AT5G48910 GeneFarm:3360 TAIR:At5g48910
eggNOG:NOG255755 InParanoid:Q9FI80 OMA:LELWREM PhylomeDB:Q9FI80
ProtClustDB:CLSN2686787 Genevestigator:Q9FI80 Uniprot:Q9FI80
Length = 646
Score = 214 (80.4 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 42/82 (51%), Positives = 58/82 (70%)
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+K + AGY P T VL +L++E KE Y SE++A A+GLIST PG+ +RI KNLRIC
Sbjct: 548 DKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICE 607
Query: 222 ECHNFIKKLSSIENREIIVRDK 243
+CH+ IK +S + R+I VRD+
Sbjct: 608 DCHSSIKLISKVYKRKITVRDR 629
Score = 154 (59.3 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GVRP+ ++ ++TAC G V+EG ++F + + P +EH+ +VDL GR + E
Sbjct: 370 GVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDE 429
Query: 120 AREFIRNMQIDASSVVWETL 139
A EFI NM I V+W+ L
Sbjct: 430 AEEFILNMPIKPDDVIWKAL 449
Score = 63 (27.2 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 19/92 (20%), Positives = 41/92 (44%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG--I 107
+E + + +RPN+ T V V+ A G+++ G + D I ++ LG +
Sbjct: 259 VEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIR--IDDVLGSAL 315
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+D+Y + I +A + + + + W +
Sbjct: 316 IDMYSKCGIIEKAIHVFERLPRE-NVITWSAM 346
Score = 60 (26.2 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEN-----DGVRPNWSTFVGVI 72
A++ K++ G+ I LL C L+E G+R+ + DG+ P + ++
Sbjct: 359 AIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMV 418
Query: 73 TACGCFGAVDE 83
G G +DE
Sbjct: 419 DLLGRSGLLDE 429
Score = 56 (24.8 bits), Expect = 6.3e-20, Sum P(2) = 6.3e-20
Identities = 22/76 (28%), Positives = 32/76 (42%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V PN TF V+ AC G + EG Q + Y +V +Y + +A
Sbjct: 124 VEPNRFTFPSVLKACAKTGKIQEGKQ-IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDA 182
Query: 121 RE-FIRNMQIDASSVV 135
R F +N+ I+ VV
Sbjct: 183 RVLFYKNI-IEKDMVV 197
>TAIR|locus:1009023396 [details] [associations]
symbol:AT5G40405 "AT5G40405" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB006702 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00656840 RefSeq:NP_001031987.1
UniGene:At.63338 ProteinModelPortal:Q9FND7 PaxDb:Q9FND7
EnsemblPlants:AT5G40405.1 GeneID:3771385 KEGG:ath:AT5G40405
GeneFarm:3177 TAIR:At5g40405 eggNOG:NOG250628 OMA:LETANHG
PhylomeDB:Q9FND7 ProtClustDB:CLSN2918762 Genevestigator:Q9FND7
Uniprot:Q9FND7
Length = 612
Score = 189 (71.6 bits), Expect = 4.6e-30, Sum P(2) = 4.6e-30
Identities = 42/126 (33%), Positives = 67/126 (53%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
+++ A+EV ++ ++ S + L K LE + DGV PN TFV V+
Sbjct: 290 DMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLR 349
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
C G VDEG +HF+S+ ++ I P LEH+ +VDLY R ++ +A I+ M + +
Sbjct: 350 GCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHA 409
Query: 134 VVWETL 139
VW +L
Sbjct: 410 AVWSSL 415
Score = 178 (67.7 bits), Expect = 4.6e-30, Sum P(2) = 4.6e-30
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AGY T V+ D+D+E KE SE+ A+A+G++S +RI KNLR+CG+CH
Sbjct: 519 AGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQV 578
Query: 227 IKKLSSIENREIIVRDK 243
+S I NREIIVRD+
Sbjct: 579 SMMISKIFNREIIVRDR 595
Score = 79 (32.9 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+GV+ N + V++AC GA+D+G + R+ I T+ +VDLY + +
Sbjct: 234 EGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERN-KIKITVRLATTLVDLYAKCGDME 292
Query: 119 EAREFIRNMQIDASSVVWET 138
+A E M+ + + W +
Sbjct: 293 KAMEVFWGME-EKNVYTWSS 311
Score = 40 (19.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 15/66 (22%), Positives = 31/66 (46%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR-FE---N 58
+S L L + LE+ +K G+ ++ + +L C + ++ G+R F+ N
Sbjct: 310 SSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRN 369
Query: 59 D-GVRP 63
+ G+ P
Sbjct: 370 EFGIEP 375
Score = 37 (18.1 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 19/95 (20%), Positives = 42/95 (44%)
Query: 40 LLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP 99
L+++ +L L++ + N P++ ++TAC G V + FE + + +P
Sbjct: 149 LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMP---ERDP 205
Query: 100 TLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
+ ++ Y ++ + EA MQ++ V
Sbjct: 206 IAWN--AMISGYAQVGESREALNVFHLMQLEGVKV 238
>TAIR|locus:2097365 [details] [associations]
symbol:AT3G49710 "AT3G49710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00533707 PIR:T46037 RefSeq:NP_190540.1
UniGene:At.22445 UniGene:At.53859 ProteinModelPortal:Q9M2Y7
SMR:Q9M2Y7 EnsemblPlants:AT3G49710.1 GeneID:824133
KEGG:ath:AT3G49710 GeneFarm:3525 TAIR:At3g49710 eggNOG:NOG274207
InParanoid:Q9M2Y7 OMA:DDCSFVC PhylomeDB:Q9M2Y7
ProtClustDB:CLSN2684258 Genevestigator:Q9M2Y7 Uniprot:Q9M2Y7
Length = 721
Score = 176 (67.0 bits), Expect = 4.6e-30, Sum P(3) = 4.6e-30
Identities = 39/83 (46%), Positives = 55/83 (66%)
Query: 163 KKKDAGYMPYTEYVLRDLDQ--EAKEKPQT-YRSERLAVAYGLISTPPGRTLRIKKNLRI 219
K K GY+ ++ + D+ E E+ + + SE+LAVA+GL+ST G L + KNLRI
Sbjct: 621 KMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRI 680
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN IK +S++ REIIVRD
Sbjct: 681 CGDCHNAIKFMSAVAGREIIVRD 703
Score = 170 (64.9 bits), Expect = 4.6e-30, Sum P(3) = 4.6e-30
Identities = 34/86 (39%), Positives = 48/86 (55%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+R + G+ PN TFV V++AC G VDEG ++F ++ + I P EH+ ++DL GR
Sbjct: 436 QRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGR 495
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
K+ EA FI M SV W L
Sbjct: 496 AGKLEEAERFIDAMPYKPGSVAWAAL 521
Score = 50 (22.7 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 30/131 (22%), Positives = 54/131 (41%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND--- 59
NS + + +E AL + ++ G +D + +LN L L G++F
Sbjct: 209 NSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIK 268
Query: 60 -GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
G N G+I G D G E V ++ ++P L + ++ Y ++++
Sbjct: 269 AGFHQNSHVGSGLIDFYSKCGGCD-GMYDSEKVFQEI-LSPDLVVWNTMISGYSMNEELS 326
Query: 119 E-AREFIRNMQ 128
E A + R MQ
Sbjct: 327 EEAVKSFRQMQ 337
Score = 44 (20.5 bits), Expect = 4.6e-30, Sum P(3) = 4.6e-30
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 13 REVKAALEVMDKLKNIGIFLDSPDIIELLNVCMD 46
RE AA+ + +++ +G +D + L+ C D
Sbjct: 119 RETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD 152
Score = 44 (20.5 bits), Expect = 4.4e-17, Sum P(3) = 4.4e-17
Identities = 20/105 (19%), Positives = 48/105 (45%)
Query: 41 LNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPT 100
+N + + +++ ++ + G RP+ +FV V +AC + + Q + + +
Sbjct: 321 MNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNR 380
Query: 101 LEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEK-YAQ 144
+ ++ LY + + +AR M + ++V + + K YAQ
Sbjct: 381 ISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQ 424
Score = 43 (20.2 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 23/87 (26%), Positives = 34/87 (39%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYG 112
KR G + T G+I AC C VD Q H SV+ +D ++ + V Y
Sbjct: 129 KRMRKLGFEVDGFTLSGLIAAC-C-DRVDLIKQLHCFSVSGGFDSYSSVNN--AFVTYYS 184
Query: 113 RLQKIAEAREFIRNMQIDASSVVWETL 139
+ + EA M V W ++
Sbjct: 185 KGGLLREAVSVFYGMDELRDEVSWNSM 211
>TAIR|locus:4010713895 [details] [associations]
symbol:AT4G21065 "AT4G21065" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:BX826462 EMBL:BX827021
IPI:IPI00846696 IPI:IPI00921709 PIR:A85240 PIR:T10649
RefSeq:NP_001078414.1 RefSeq:NP_001078415.1 UniGene:At.49734
ProteinModelPortal:A8MQA3 SMR:A8MQA3 PRIDE:A8MQA3
EnsemblPlants:AT4G21065.1 GeneID:5008150 KEGG:ath:AT4G21065
GeneFarm:3325 TAIR:At4g21065 eggNOG:NOG242330 OMA:PDTHTYP
PhylomeDB:A8MQA3 ProtClustDB:CLSN2699103 Genevestigator:A8MQA3
Uniprot:A8MQA3
Length = 595
Score = 192 (72.6 bits), Expect = 5.2e-30, Sum P(2) = 5.2e-30
Identities = 35/80 (43%), Positives = 53/80 (66%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
+ GY+P V D+++E KE Y SE++A+A+ LISTP + + KNLR+C +CH
Sbjct: 500 RSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCH 559
Query: 225 NFIKKLSSIENREIIVRDKT 244
IK +S + NREI+VRD++
Sbjct: 560 LAIKLVSKVYNREIVVRDRS 579
Score = 174 (66.3 bits), Expect = 5.2e-30, Sum P(2) = 5.2e-30
Identities = 35/91 (38%), Positives = 56/91 (61%)
Query: 50 LEAGKRFEN-DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIV 108
+E K E+ +G+ P TFVG++ AC G V EGF++F + +Y I P +EHF +V
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 109 DLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
DL R ++ +A E+I++M + + V+W TL
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 398
Score = 90 (36.7 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 33/140 (23%), Positives = 61/140 (43%)
Query: 2 LNSELKHLCRE-REVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDG 60
+ + L HL +V +A +V DK+ + + I + L + G
Sbjct: 158 VQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 217
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
++P+ T V +++AC GA+ G + H + + L ++DLY R ++ E
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK--VGLTRNLHSSNVLLDLYARCGRVEE 275
Query: 120 AREFIRNMQIDASSVVWETL 139
A+ M +D +SV W +L
Sbjct: 276 AKTLFDEM-VDKNSVSWTSL 294
Score = 45 (20.9 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 20/91 (21%), Positives = 36/91 (39%)
Query: 42 NVCMDLKL----LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDI 97
NV +DL +E K ++ V N ++ +I G E + F+ + +
Sbjct: 261 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 320
Query: 98 NPTLEHFLGIVDLYGRLQKIAEAREFIRNMQ 128
P F+GI+ + E E+ R M+
Sbjct: 321 LPCEITFVGILYACSHCGMVKEGFEYFRRMR 351
>TAIR|locus:2130389 [details] [associations]
symbol:LOI1 "lovastatin insensitive 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0016125 "sterol metabolic process"
evidence=IMP] [GO:0019287 "isopentenyl diphosphate biosynthetic
process, mevalonate pathway" evidence=IMP] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=IMP] [GO:0034046 "poly(G) RNA binding" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=IMP] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 GO:GO:0050790 GO:GO:0048364
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0016125 GO:GO:0034046
EMBL:AL161540 EMBL:Z97337 Pfam:PF01535 TIGRFAMs:TIGR00756
GO:GO:0019288 GO:GO:0019287 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:AK227954 EMBL:BT010464 IPI:IPI00542565 PIR:F71411
RefSeq:NP_193221.3 UniGene:At.33233 ProteinModelPortal:Q0WSH6
SMR:Q0WSH6 STRING:Q0WSH6 PRIDE:Q0WSH6 EnsemblPlants:AT4G14850.1
GeneID:827142 KEGG:ath:AT4G14850 GeneFarm:3145 TAIR:At4g14850
eggNOG:NOG292234 InParanoid:Q0WSH6 OMA:CSAFDMY PhylomeDB:Q0WSH6
ProtClustDB:CLSN2681604 Genevestigator:Q0WSH6 Uniprot:Q0WSH6
Length = 684
Score = 198 (74.8 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 40/81 (49%), Positives = 55/81 (67%)
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
N+ + AGY P + L DL++E K ++ SE+LA+A+GL+S P +RI KNLRICG
Sbjct: 586 NEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICG 645
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH+F K +S REIIVRD
Sbjct: 646 DCHSFFKFVSGSVKREIIVRD 666
Score = 165 (63.1 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 33/81 (40%), Positives = 47/81 (58%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G PN+ TFV +++AC GAV+ G + F+S+ Y I P EH+ IVD+ GR +
Sbjct: 408 GPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVER 467
Query: 120 AREFIRNMQIDASSVVWETLE 140
A EFI+ M I + VW L+
Sbjct: 468 AYEFIKKMPIQPTISVWGALQ 488
Score = 68 (29.0 bits), Expect = 2.2e-19, Sum P(2) = 2.2e-19
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 50 LEAGKRFEN-DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHFLGI 107
+EA F DG PN TF + AC + ++ G Q V R +D + ++ + G+
Sbjct: 194 IEAFIEFRRIDG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN--GL 250
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL-EKYAQ 144
+D YG+ ++I + E I ++V W +L Y Q
Sbjct: 251 IDFYGKCKQIRSS-EIIFTEMGTKNAVSWCSLVAAYVQ 287
Score = 45 (20.9 bits), Expect = 5.6e-17, Sum P(2) = 5.6e-17
Identities = 18/80 (22%), Positives = 31/80 (38%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + + + + A+E + + I +S LN C D L G + +R
Sbjct: 178 NAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLR 237
Query: 63 PNWSTFVGVITACGCFGAVD 82
+ T V V C G +D
Sbjct: 238 SGFDTDVSV-----CNGLID 252
>TAIR|locus:2096414 [details] [associations]
symbol:AT3G03580 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC009327 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:BT004278 EMBL:BT006153 IPI:IPI00535817 RefSeq:NP_187008.1
UniGene:At.40958 ProteinModelPortal:Q9SS60 SMR:Q9SS60 PaxDb:Q9SS60
PRIDE:Q9SS60 EnsemblPlants:AT3G03580.1 GeneID:821229
KEGG:ath:AT3G03580 GeneFarm:3232 TAIR:At3g03580 eggNOG:NOG261100
InParanoid:Q9SS60 OMA:YTFPSVI PhylomeDB:Q9SS60
ProtClustDB:CLSN2684094 Genevestigator:Q9SS60 Uniprot:Q9SS60
Length = 882
Score = 184 (69.8 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 37/77 (48%), Positives = 54/77 (70%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTY--RSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
GY+P V ++L++E +EK + SERLA+A+GL++T PG L++ KNLR+CG+CH
Sbjct: 789 GYIPDPREVSQNLEEE-EEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHE 847
Query: 226 FIKKLSSIENREIIVRD 242
K +S I REI+VRD
Sbjct: 848 VTKLISKIVGREILVRD 864
Score = 182 (69.1 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 40/122 (32%), Positives = 58/122 (47%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K LE E G+ P+ F+ +I AC G VDEG FE + Y I+P +EH+ +
Sbjct: 593 KALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACV 652
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTXXXXXXXXXXXXXXXXNKKKDA 167
VDL R QKI++A EFI+ M I + +W ++ + +T D
Sbjct: 653 VDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDP 712
Query: 168 GY 169
GY
Sbjct: 713 GY 714
Score = 76 (31.8 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 53 GKRFENDGVRPNWSTFVGVITAC-GCFGAVDEGFQHFESVTRDYDINPTLEHFLG--IVD 109
GK E+ V P+ TF VI AC G F A + G +E + D+ + F+G +VD
Sbjct: 95 GKLRESK-VSPDKYTFPSVIKACAGLFDA-EMGDLVYEQIL---DMGFESDLFVGNALVD 149
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+Y R+ + AR+ M + V W +L
Sbjct: 150 MYSRMGLLTRARQVFDEMPV-RDLVSWNSL 178
Score = 60 (26.2 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 24/110 (21%), Positives = 51/110 (46%)
Query: 43 VC--MDLKLLEAGKRF--EN-DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTR-DYD 96
+C + L+++E R EN D +P+ T V+ ACG + + + + +
Sbjct: 280 ICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV 339
Query: 97 INPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL-EKYAQT 145
+ T+ + L +D+Y + + AR+ +M+ +V W ++ Y Q+
Sbjct: 340 LESTVRNIL--IDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQS 386
Score = 54 (24.1 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 21/90 (23%), Positives = 37/90 (41%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE +N + P+ T V+ A G V +G Q +N + G+V
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG-QGLHGFALKSGVNSVVVVNNGLVA 250
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+Y + ++ +AR M + SV + T+
Sbjct: 251 MYLKFRRPTDARRVFDEMDV-RDSVSYNTM 279
Score = 49 (22.3 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 28/141 (19%), Positives = 54/141 (38%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK-------R 55
N+ + R + L+V +++ + D + L +C L GK R
Sbjct: 478 NTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR 537
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
F + + + + + CGC ++ + FE ++R D+ T + +YG +
Sbjct: 538 FGYESELQIGNALIEMYSKCGC---LENSSRVFERMSRR-DV-VTWTGMIYAYGMYGEGE 592
Query: 116 KIAEAREFIRNMQIDASSVVW 136
K E + I SVV+
Sbjct: 593 KALETFADMEKSGIVPDSVVF 613
Score = 48 (22.0 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
+IE+ + C L+ + + FE R + T+ G+I A G +G ++ + F + +
Sbjct: 550 LIEMYSKCGCLE--NSSRVFERMS-RRDVVTWTGMIYAYGMYGEGEKALETFADMEKS-G 605
Query: 97 INPTLEHFLGIV 108
I P F+ I+
Sbjct: 606 IVPDSVVFIAII 617
Score = 44 (20.5 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG 53
E + ALE ++ GI DS I ++ C L++ G
Sbjct: 590 EGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
Score = 44 (20.5 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 25/84 (29%), Positives = 37/84 (44%)
Query: 29 GIFLDSPDIIELLNVCMDL--KLLEAG---KRFENDGVRPN--WSTFVGVITACGCFGAV 81
GI +D + + N +D+ K E G K F + G W+T VI+AC FG
Sbjct: 438 GICID----LSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNT---VISACVRFGDF 490
Query: 82 DEGFQHFESVTRDYDINPTLEHFL 105
G Q + R ++ P + FL
Sbjct: 491 ATGLQ-VTTQMRKSEVVPDMATFL 513
Score = 43 (20.2 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 24/115 (20%), Positives = 53/115 (46%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFV----GVIT 73
ALE+ +LKN I DS + +L +L +++ G+ ++ ++ V G++
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA-REFIRNM 127
F + + F+ + D+ ++ + I Y +L+ + E+ R F+ N+
Sbjct: 251 MYLKFRRPTDARRVFDEM----DVRDSVSYNTMICG-YLKLEMVEESVRMFLENL 300
>TAIR|locus:2131939 [details] [associations]
symbol:MEF29 "AT4G30700" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0000963
"mitochondrial RNA processing" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0016554 "cytidine to uridine editing"
evidence=IMP] [GO:0080156 "mitochondrial mRNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016554
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL161577 Pfam:PF01535
TIGRFAMs:TIGR00756 GO:GO:0000963 Pfam:PF13041 HOGENOM:HOG000237570
GO:GO:0080156 EMBL:AL109787 EMBL:BX828159 EMBL:AJ006042
IPI:IPI00535639 PIR:C85359 PIR:T52645 RefSeq:NP_194799.1
UniGene:At.65435 ProteinModelPortal:Q9SUH6 SMR:Q9SUH6 PaxDb:Q9SUH6
PRIDE:Q9SUH6 EnsemblPlants:AT4G30700.1 GeneID:829193
KEGG:ath:AT4G30700 GeneFarm:3164 TAIR:At4g30700 eggNOG:NOG256068
InParanoid:Q9SUH6 OMA:MVKVHSE PhylomeDB:Q9SUH6
ProtClustDB:CLSN2685640 Genevestigator:Q9SUH6 Uniprot:Q9SUH6
Length = 792
Score = 209 (78.6 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 40/80 (50%), Positives = 54/80 (67%)
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
K ++AGY P TE L D+++E +E SERLA+A+GLI+T PG +RI KNLR+C +
Sbjct: 695 KMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLD 754
Query: 223 CHNFIKKLSSIENREIIVRD 242
CH K +S I R I+VRD
Sbjct: 755 CHTVTKLISKITERVIVVRD 774
Score = 155 (59.6 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 32/82 (39%), Positives = 46/82 (56%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
N G+ P TF+ V+ AC G V EG + F S+ Y P+++H+ +VD+ GR +
Sbjct: 514 NSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHL 573
Query: 118 AEAREFIRNMQIDASSVVWETL 139
A +FI M I+ S VWETL
Sbjct: 574 QRALQFIEAMSIEPGSSVWETL 595
Score = 80 (33.2 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN T +++AC GA+ G + + R D ++ ++ +Y + IAEAR
Sbjct: 418 PNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARR 476
Query: 123 FIRNMQIDASSVVWETL 139
++ + V W T+
Sbjct: 477 LF-DLMTKKNEVTWNTM 492
Score = 59 (25.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEG-FQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
++PN ST+ I+A F G H ++V D L IV +Y + ++ +
Sbjct: 115 LKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGS--NIVKMYFKFWRVED 172
Query: 120 AREFIRNMQIDASSVVWETL 139
AR+ M + +++W T+
Sbjct: 173 ARKVFDRMP-EKDTILWNTM 191
>TAIR|locus:2077878 [details] [associations]
symbol:AT3G08820 "AT3G08820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 EMBL:AC012562
PROSITE:PS51375 EMBL:AC010871 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00518512
RefSeq:NP_187494.1 UniGene:At.65071 ProteinModelPortal:Q9SR82
SMR:Q9SR82 PaxDb:Q9SR82 PRIDE:Q9SR82 EnsemblPlants:AT3G08820.1
GeneID:820029 KEGG:ath:AT3G08820 GeneFarm:3532 TAIR:At3g08820
eggNOG:NOG303126 InParanoid:Q9SR82 OMA:LIALEPW PhylomeDB:Q9SR82
ProtClustDB:CLSN2684962 Genevestigator:Q9SR82 Uniprot:Q9SR82
Length = 685
Score = 222 (83.2 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 41/81 (50%), Positives = 59/81 (72%)
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
N+ + G++P TE+V D+++E KE+ Y SE+LAVA GLIST G+ +R+ KNLR+CG
Sbjct: 587 NEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCG 646
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH +K +S I REI+VRD
Sbjct: 647 DCHEVMKLISKITRREIVVRD 667
Score = 138 (53.6 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 37/123 (30%), Positives = 66/123 (53%)
Query: 20 EVMDKLKNIGIFLDSPDIIELL-NVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCF 78
EV ++K I + + I L N + L G+ E G+ P+ STF+G++ CGC
Sbjct: 369 EVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQT-EKLGISPDGSTFLGLL--CGCV 425
Query: 79 --GAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVW 136
G + +G + F +++ Y + T+EH+ +VDL+GR + +A I +M + +++VW
Sbjct: 426 HAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVW 485
Query: 137 ETL 139
L
Sbjct: 486 GAL 488
Score = 75 (31.5 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 23/91 (25%), Positives = 43/91 (47%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K+ GV+P+ V V++AC G +D G + + ++ +V+LY +
Sbjct: 201 KKMVEMGVKPDSYFIVQVLSACVHVGDLDSG-EWIVKYMEEMEMQKNSFVRTTLVNLYAK 259
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL-EKYA 143
K+ +AR +M ++ V W T+ + YA
Sbjct: 260 CGKMEKARSVFDSM-VEKDIVTWSTMIQGYA 289
Score = 67 (28.6 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEN 58
+N+ + L + VK + V + + +GI D + LL C+ L++ G RF N
Sbjct: 382 MNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438
Score = 66 (28.3 bits), Expect = 9.8e-22, Sum P(2) = 9.8e-22
Identities = 15/70 (21%), Positives = 34/70 (48%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+ ++P+ + VG +++C GA+D G + R ++ L ++D+Y + +A
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGAMA 365
Query: 119 EAREFIRNMQ 128
E + M+
Sbjct: 366 RGFEVFKEMK 375
>TAIR|locus:2202074 [details] [associations]
symbol:CRR22 "CHLORORESPIRATORY REDUCTION22" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0004519 "endonuclease activity" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0016556 "mRNA modification"
evidence=RCA;IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0016556
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0004519 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC007259 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00534837 RefSeq:NP_172596.1 UniGene:At.65900
ProteinModelPortal:Q3E6Q1 SMR:Q3E6Q1 STRING:Q3E6Q1 PaxDb:Q3E6Q1
PRIDE:Q3E6Q1 EnsemblPlants:AT1G11290.1 GeneID:837671
KEGG:ath:AT1G11290 GeneFarm:3466 TAIR:At1g11290 eggNOG:NOG272527
InParanoid:Q3E6Q1 OMA:HVITWNA PhylomeDB:Q3E6Q1
ProtClustDB:CLSN2681952 Genevestigator:Q3E6Q1 Uniprot:Q3E6Q1
Length = 809
Score = 195 (73.7 bits), Expect = 7.1e-29, Sum P(3) = 7.1e-29
Identities = 35/78 (44%), Positives = 56/78 (71%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K+AGY+P T VL ++ + KE+ + SE+LA+++GL++T G T+ ++KNLR+C +CH
Sbjct: 715 KEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCH 773
Query: 225 NFIKKLSSIENREIIVRD 242
N K +S + REI+VRD
Sbjct: 774 NATKYISLVTGREIVVRD 791
Score = 134 (52.2 bits), Expect = 7.1e-29, Sum P(3) = 7.1e-29
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE + + ++PN TF+ VI+AC G V+ G + F + +Y I +++H+ +VD
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583
Query: 110 LYGRLQKIAEAREFIRNMQI 129
L GR ++ EA +FI M +
Sbjct: 584 LLGRAGRLNEAWDFIMQMPV 603
Score = 73 (30.8 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 27/134 (20%), Positives = 57/134 (42%)
Query: 13 REVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVI 72
R+V A +V D++ + + + M LE K + ++P++ T V V+
Sbjct: 184 RQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVL 243
Query: 73 TACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDA 131
A + G + H ++ +D + +VD+Y + + AR+ M ++
Sbjct: 244 PAVSALRLISVGKEIHGYAMRSGFDSLVNIS--TALVDMYAKCGSLETARQLFDGM-LER 300
Query: 132 SSVVWETL-EKYAQ 144
+ V W ++ + Y Q
Sbjct: 301 NVVSWNSMIDAYVQ 314
Score = 68 (29.0 bits), Expect = 7.9e-19, Sum P(2) = 7.9e-19
Identities = 20/83 (24%), Positives = 40/83 (48%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEG-FQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
++GV+P + +G + AC G ++ G F H SV D N ++ + L + +Y + ++
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSL--ISMYCKCKE 387
Query: 117 IAEAREFIRNMQIDASSVVWETL 139
+ A +Q + V W +
Sbjct: 388 VDTAASMFGKLQ-SRTLVSWNAM 409
Score = 65 (27.9 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 28/138 (20%), Positives = 56/138 (40%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGV 61
+NS + C+ +EV A + KL++ + + I+ + L + + V
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
+P+ T+V VITA ++ + V ++ + +VD+Y + I AR
Sbjct: 435 KPDTFTYVSVITAIAEL-SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 122 EFIRNMQIDASSVVWETL 139
I +M + W +
Sbjct: 494 -LIFDMMSERHVTTWNAM 510
Score = 62 (26.9 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 26/102 (25%), Positives = 45/102 (44%)
Query: 46 DL-KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEH 103
DL K L+ R D V P F ++ CG + G + H V + ++ L
Sbjct: 115 DLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLD--LFA 172
Query: 104 FLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEK-YAQ 144
G+ ++Y + +++ EAR+ M + V W T+ Y+Q
Sbjct: 173 MTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIVAGYSQ 213
Score = 53 (23.7 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG-KRF----ENDGVRPNWSTFVG 70
KAALE+ ++++ I + + +++ C L+EAG K F EN + + +
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 71 VITACGCFGAVDEGF 85
++ G G ++E +
Sbjct: 581 MVDLLGRAGRLNEAW 595
Score = 51 (23.0 bits), Expect = 7.1e-29, Sum P(3) = 7.1e-29
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK 54
NS + + K A+ + K+ + G+ ++ L+ C DL LE G+
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Score = 45 (20.9 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 24/94 (25%), Positives = 44/94 (46%)
Query: 40 LLNVCMDLKLLEA--GKRFENDGVRPNWSTFVGVITACGC-FGAVDEGFQHFESVTRDYD 96
LL C LK L F+N + ++ F + + C +G+VDE + FE + D
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHF--FQTKLVSLFCRYGSVDEAARVFEPI--DSK 98
Query: 97 INPTLEHFLGIVDLYGRLQKIAEAREFIRNMQID 130
+N L H + + + ++ + +A +F M+ D
Sbjct: 99 LN-VLYHTM--LKGFAKVSDLDKALQFFVRMRYD 129
>TAIR|locus:2164880 [details] [associations]
symbol:EMB2744 "EMBRYO DEFECTIVE 2744" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
stress" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB012243
UniGene:At.19755 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:BX832481
IPI:IPI00547786 RefSeq:NP_198784.1 UniGene:At.68250
UniGene:At.70298 ProteinModelPortal:Q9FK93 SMR:Q9FK93 PRIDE:Q9FK93
EnsemblPlants:AT5G39680.1 GeneID:833964 KEGG:ath:AT5G39680
GeneFarm:3361 TAIR:At5g39680 eggNOG:NOG268326 InParanoid:Q9FK93
OMA:RWDGVVK PhylomeDB:Q9FK93 ProtClustDB:CLSN2687498
Genevestigator:Q9FK93 Uniprot:Q9FK93
Length = 710
Score = 194 (73.4 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 38/81 (46%), Positives = 51/81 (62%)
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+K K GY P D+D+E +E +Y SE+LAVAYGLI TP L + KN+RIC
Sbjct: 612 SKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICD 671
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH+ IK +S I R I++RD
Sbjct: 672 DCHSAIKLISKISKRYIVIRD 692
Score = 157 (60.3 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 31/90 (34%), Positives = 48/90 (53%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LEA R G PN TF+GV+ AC G V++G +F + + +D+ P ++H+ IV
Sbjct: 424 LEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVG 483
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
L + +A +F+R I+ V W TL
Sbjct: 484 LLSKAGMFKDAEDFMRTAPIEWDVVAWRTL 513
Score = 50 (22.7 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPN---WST 67
+ ALE D++ G + I +L C + +E G + N V+P+ ++
Sbjct: 421 REALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTC 480
Query: 68 FVGVITACGCF 78
VG+++ G F
Sbjct: 481 IVGLLSKAGMF 491
Score = 44 (20.5 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 20/86 (23%), Positives = 35/86 (40%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR-FENDG 60
+NS + + RE A ++ D + + + N D ++L+ K F +
Sbjct: 72 INSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGE 131
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQ 86
RPN V +C G ++EG Q
Sbjct: 132 SRPNEFVATVVFKSCSNSGRIEEGKQ 157
>TAIR|locus:2012295 [details] [associations]
symbol:AT1G09410 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 EMBL:AC003970 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 UniGene:At.70699 Pfam:PF12854
HOGENOM:HOG000237570 EMBL:DQ446238 EMBL:AK221693 IPI:IPI00525858
IPI:IPI00570432 PIR:D86227 RefSeq:NP_172412.1 UniGene:At.63945
ProteinModelPortal:Q56XI1 SMR:Q56XI1 PRIDE:Q56XI1
EnsemblPlants:AT1G09410.1 GeneID:837463 KEGG:ath:AT1G09410
GeneFarm:3184 TAIR:At1g09410 eggNOG:NOG252899 InParanoid:O80524
OMA:NEAMEMI PhylomeDB:Q56XI1 Genevestigator:Q56XI1 Uniprot:Q56XI1
Length = 705
Score = 204 (76.9 bits), Expect = 6.5e-28, Sum P(2) = 6.5e-28
Identities = 38/78 (48%), Positives = 51/78 (65%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
++AGY P Y L D+D+E K Y SERLAVAY L+ G +R+ KNLR+C +CH
Sbjct: 610 REAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCH 669
Query: 225 NFIKKLSSIENREIIVRD 242
IK +S ++ REII+RD
Sbjct: 670 TAIKIISKVKEREIILRD 687
Score = 144 (55.7 bits), Expect = 6.5e-28, Sum P(2) = 6.5e-28
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
+PN TFV ++AC G V+EG + +ES+ + + P H+ +VD+ GR + EA
Sbjct: 430 KPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAM 489
Query: 122 EFIRNMQIDASSVVWETL 139
E I +M ++ + VW +L
Sbjct: 490 EMIDSMTVEPDAAVWGSL 507
Score = 71 (30.1 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 3 NSELKHLCREREVKAALEVMDKLK--NIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDG 60
N+ + L ++ E+ A V D +K N + I E +L+ L+ + G
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNG--FELEALDLFILMQKQG 326
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDIN 98
VRP + T + +++ C ++ G Q H + V +D++
Sbjct: 327 VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVD 365
Score = 47 (21.6 bits), Expect = 8.7e-18, Sum P(2) = 8.7e-18
Identities = 29/141 (20%), Positives = 62/141 (43%)
Query: 4 SELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFE--NDGV 61
S + LC+E V A E+ D++ + + + + ++ +A K F+ +
Sbjct: 177 SMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVT---GYGQNNRVDDARKIFDVMPEKT 233
Query: 62 RPNW-STFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+W S +G + G +++ + FE + + P + I L G+ +IA+A
Sbjct: 234 EVSWTSMLMGYVQN----GRIEDAEELFEVMP----VKPVIACNAMISGL-GQKGEIAKA 284
Query: 121 REFIRNMQIDASSVVWETLEK 141
R +M+ + + W+T+ K
Sbjct: 285 RRVFDSMK-ERNDASWQTVIK 304
Score = 44 (20.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 38 IELLNVCMDLKLLEAG-KRFEND----GVRPNWSTFVGVITACGCFGAVDEGFQHFESVT 92
+ L+ C ++E G K +E+ GV+P + + ++ G G +E + +S+T
Sbjct: 437 VATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT 496
Query: 93 RDYD 96
+ D
Sbjct: 497 VEPD 500
>TAIR|locus:2119440 [details] [associations]
symbol:AT4G13650 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL035528 EMBL:AL161537
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:BX827423 IPI:IPI00545859 PIR:T05234 RefSeq:NP_193101.2
UniGene:At.50335 ProteinModelPortal:Q9SVP7 SMR:Q9SVP7 PaxDb:Q9SVP7
PRIDE:Q9SVP7 EnsemblPlants:AT4G13650.1 GeneID:826999
KEGG:ath:AT4G13650 GeneFarm:3429 TAIR:At4g13650 eggNOG:NOG244096
InParanoid:Q9SVP7 OMA:YVCNALV PhylomeDB:Q9SVP7
ProtClustDB:CLSN2680966 Genevestigator:Q9SVP7 Uniprot:Q9SVP7
Length = 1064
Score = 187 (70.9 bits), Expect = 6.9e-28, Sum P(2) = 6.9e-28
Identities = 35/90 (38%), Positives = 57/90 (63%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L++ + + VRPN T VGV++AC G VD+G +FES+ +Y ++P EH++ +VD
Sbjct: 778 LDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVD 837
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+ R ++ A+EFI+ M I ++VW TL
Sbjct: 838 MLTRAGLLSRAKEFIQEMPIKPDALVWRTL 867
Score = 166 (63.5 bits), Expect = 6.9e-28, Sum P(2) = 6.9e-28
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
+ + GY+ +L +L E K+ SE+LA+++GL+S P + + KNLR+C +
Sbjct: 967 RASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCND 1026
Query: 223 CHNFIKKLSSIENREIIVRD 242
CH +IK +S + NREIIVRD
Sbjct: 1027 CHAWIKFVSKVSNREIIVRD 1046
Score = 87 (35.7 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 23/93 (24%), Positives = 44/93 (47%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLG 106
K +E KR DG+ P+ +T ++ AC G + G Q H + + N +E L
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL- 430
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
++LY + I A ++ +++ + V+W +
Sbjct: 431 -LNLYAKCADIETALDYFLETEVE-NVVLWNVM 461
Score = 68 (29.0 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 24/96 (25%), Positives = 44/96 (45%)
Query: 46 DLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHF 104
D K L ++ + G+R + ++AC A+ EG Q H ++ + + ++
Sbjct: 572 DDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNA 631
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDAS-SVVWETL 139
L V LY R KI E+ ++ Q +A ++ W L
Sbjct: 632 L--VTLYSRCGKIEES--YLAFEQTEAGDNIAWNAL 663
Score = 66 (28.3 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 57 ENDGVRPNWSTFVGVITAC-GCFGAVDEGFQ-HFESVTRDYDINPTL-----EHFLGIVD 109
EN G+RPN T ++ C G++DEG + H + + D N L + +L D
Sbjct: 76 ENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGD 135
Query: 110 LYGRLQKIAEARE 122
LYG + E E
Sbjct: 136 LYGAFKVFDEMPE 148
Score = 66 (28.3 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 19/88 (21%), Positives = 44/88 (50%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYG 112
++ + + + PN T+ ++ C G ++ G Q H + + ++ +N + L +D+Y
Sbjct: 479 RQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVL--IDMYA 536
Query: 113 RLQKIAEAREFIRNMQIDASSVV-WETL 139
+L K+ A + + ++ VV W T+
Sbjct: 537 KLGKLDTAWDIL--IRFAGKDVVSWTTM 562
Score = 62 (26.9 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 32/110 (29%), Positives = 51/110 (46%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
++ A +V D++ IF + I EL + + ++ R ++ V PN TF GV+
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 74 AC-GCFGAVDEGFQ-HFESV---TRDYDI--NPTLEHFL--GIVDLYGRL 114
AC G A D Q H + RD + NP ++ + G VDL R+
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRV 244
Score = 48 (22.0 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 21/81 (25%), Positives = 32/81 (39%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ P F V++AC +++ G Q + + +V LY L +
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQ-LHGLVLKLGFSSDTYVCNALVSLYFHLGNLIS 341
Query: 120 AREFIRNM-QIDASSVVWETL 139
A NM Q DA V + TL
Sbjct: 342 AEHIFSNMSQRDA--VTYNTL 360
>TAIR|locus:2170548 [details] [associations]
symbol:AT5G40410 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB006702 Pfam:PF13041
HOGENOM:HOG000237570 EMBL:AY062639 EMBL:BT008372 IPI:IPI00522697
RefSeq:NP_198857.2 UniGene:At.27281 ProteinModelPortal:Q9FND6
SMR:Q9FND6 PaxDb:Q9FND6 PRIDE:Q9FND6 EnsemblPlants:AT5G40410.1
GeneID:834039 KEGG:ath:AT5G40410 GeneFarm:3374 TAIR:At5g40410
eggNOG:NOG272143 InParanoid:Q9FND6 OMA:GCSYIEH PhylomeDB:Q9FND6
ProtClustDB:CLSN2681656 Genevestigator:Q9FND6 Uniprot:Q9FND6
Length = 608
Score = 192 (72.6 bits), Expect = 7.0e-28, Sum P(2) = 7.0e-28
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
K + GY TE+VL D+ ++ KE+ SE++A+A+GL+ P + I+KNLRICG+C
Sbjct: 512 KSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDC 571
Query: 224 HNFIKKLSSIENREIIVRD 242
H K +S IE R II+RD
Sbjct: 572 HETAKAISLIEKRRIIIRD 590
Score = 154 (59.3 bits), Expect = 7.0e-28, Sum P(2) = 7.0e-28
Identities = 34/92 (36%), Positives = 55/92 (59%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+A K FE + G+ P+ TF ++ AC G V+EG +FE++++ Y I+P L+H+ +
Sbjct: 319 DAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCM 378
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
VDL GR + +A I+ M ++ SS VW L
Sbjct: 379 VDLLGRSGLLQDAYGLIKEMPMEPSSGVWGAL 410
Score = 72 (30.4 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 18/80 (22%), Positives = 39/80 (48%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G RPN TF+ +I+AC G+ +EG + + + + ++ ++ YG+ +
Sbjct: 129 GFRPNEVTFLSMISACVYGGSKEEG-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTS 187
Query: 120 AREFIRNMQIDASSVVWETL 139
+ + ++ I + V W T+
Sbjct: 188 SCKLFEDLSIK-NLVSWNTM 206
Score = 52 (23.4 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 20/87 (22%), Positives = 38/87 (43%)
Query: 60 GVRPNWSTFVGVITACGCFGAVD--EGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
G P+ +TF+ V+ +C G V +G H + + N + ++DLY +L ++
Sbjct: 230 GHEPDQATFLAVLRSCEDMGVVRLAQGI-HGLIMFGGFSGNKCIT--TALLDLYSKLGRL 286
Query: 118 AEAREFIRNMQIDASSVVWET-LEKYA 143
++ + S+ W L YA
Sbjct: 287 EDSSTVFHEIT-SPDSMAWTAMLAAYA 312
Score = 50 (22.7 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF 56
A++ + + + GI D LLN C L+E GK +
Sbjct: 320 AIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHY 358
Score = 50 (22.7 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 17/88 (19%), Positives = 35/88 (39%)
Query: 40 LLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP 99
LL++ L LE ++ P+ + ++ A G + +HFE + Y I+P
Sbjct: 276 LLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVH-YGISP 334
Query: 100 TLEHFLGIVDLYGRLQKIAEAREFIRNM 127
F +++ + E + + M
Sbjct: 335 DHVTFTHLLNACSHSGLVEEGKHYFETM 362
>TAIR|locus:2025946 [details] [associations]
symbol:CRR28 "CHLORORESPIRATORY REDUCTION28" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0004519 "endonuclease activity" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0016556 "mRNA modification"
evidence=RCA;IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009507
GO:GO:0016556 EMBL:AC007258 Gene3D:1.25.40.10 PROSITE:PS51375
GO:GO:0004519 EMBL:AC009317 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AK228565 IPI:IPI00526140
PIR:H96620 RefSeq:NP_176180.1 UniGene:At.11368 UniGene:At.66916
ProteinModelPortal:Q0WQW5 SMR:Q0WQW5 STRING:Q0WQW5 PaxDb:Q0WQW5
PRIDE:Q0WQW5 EnsemblPlants:AT1G59720.1 GeneID:842263
KEGG:ath:AT1G59720 GeneFarm:3437 TAIR:At1g59720 eggNOG:NOG287891
InParanoid:Q0WQW5 OMA:LLDACCK PhylomeDB:Q0WQW5
ProtClustDB:CLSN2679697 ArrayExpress:Q0WQW5 Genevestigator:Q0WQW5
Uniprot:Q0WQW5
Length = 638
Score = 176 (67.0 bits), Expect = 7.2e-28, Sum P(2) = 7.2e-28
Identities = 35/83 (42%), Positives = 52/83 (62%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
+ + VRPN TFVG++ AC G V++G Q+F+ + RDY I P LEH+ IVDL R
Sbjct: 349 KRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGY 408
Query: 117 IAEAREFIRNMQIDASSVVWETL 139
I EA + + +M + +V+W +L
Sbjct: 409 ITEAIDMVMSMPMKPDAVIWRSL 431
Score = 171 (65.3 bits), Expect = 7.2e-28, Sum P(2) = 7.2e-28
Identities = 36/84 (42%), Positives = 53/84 (63%)
Query: 162 NKKKDAGYMP-YTEYVLRDLDQE-AKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ + GY+P ++ L D + +KE SERLA+A+GLI+ PP +RI KNLR+
Sbjct: 538 DRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRV 597
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
C +CH K +S + N EIIVRD+
Sbjct: 598 CNDCHEVTKLISKVFNTEIIVRDR 621
Score = 67 (28.6 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 33/133 (24%), Positives = 54/133 (40%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCM-DLKLLEAG-----KRFENDGVRPNWST 67
+V A V D ++N F+ + L+ C D+ E K E P+ T
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNT----LIRACAHDVSRKEEAFMLYRKMLERGESSPDKHT 153
Query: 68 FVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRN 126
F V+ AC EG Q H + V + + + + G++ LYG + AR+
Sbjct: 154 FPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNN--GLIHLYGSCGCLDLARKVFDE 211
Query: 127 MQIDASSVVWETL 139
M + S V W ++
Sbjct: 212 MP-ERSLVSWNSM 223
Score = 55 (24.4 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 17/80 (21%), Positives = 36/80 (45%)
Query: 51 EAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFL--GIV 108
E + FE DG T V++AC G++ G + R D++ ++ + ++
Sbjct: 242 EMQRSFEPDGY-----TMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLI 296
Query: 109 DLYGRLQKIAEAREFIRNMQ 128
++Y + + A + + MQ
Sbjct: 297 EMYCKCGSLRMAEQVFQGMQ 316
Score = 47 (21.6 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 22/93 (23%), Positives = 38/93 (40%)
Query: 44 CMDLKLLEAGKRFENDGVRP--NWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-T 100
C+DL A K F+ R +W++ + + FG D Q F + R ++ + T
Sbjct: 201 CLDL----ARKVFDEMPERSLVSWNSMIDALVR---FGEYDSALQLFREMQRSFEPDGYT 253
Query: 101 LEHFLGIVDLYGRLQKIAEAREFI-RNMQIDAS 132
++ L G L A F+ R +D +
Sbjct: 254 MQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVA 286
>TAIR|locus:2183931 [details] [associations]
symbol:AT5G13230 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL163491 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00546460 PIR:T48570 RefSeq:NP_196827.1
UniGene:At.54832 ProteinModelPortal:Q9LYV3 SMR:Q9LYV3 PaxDb:Q9LYV3
PRIDE:Q9LYV3 EnsemblPlants:AT5G13230.1 GeneID:831163
KEGG:ath:AT5G13230 GeneFarm:3537 TAIR:At5g13230 eggNOG:NOG313696
InParanoid:Q9LYV3 OMA:INGMLEW PhylomeDB:Q9LYV3
ProtClustDB:CLSN2687006 Genevestigator:Q9LYV3 Uniprot:Q9LYV3
Length = 822
Score = 192 (72.6 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 39/81 (48%), Positives = 53/81 (65%)
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT-LRIKKNLRICG 221
K AGY+P VL D+D E K+K SERLA+AYGL+ P R + I KNLRIC
Sbjct: 724 KATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICS 783
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH+ +K +SSI R++++RD
Sbjct: 784 DCHSAMKVISSIVQRDLVIRD 804
Score = 155 (59.6 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 32/93 (34%), Positives = 56/93 (60%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
L++L+ K + D +PN TF+GV++ C G +D+G + FES+ RD+ I P LEH+
Sbjct: 535 LRILDIMK--DRD-CKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTC 591
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+V L GR ++ +A + I + + S ++W +
Sbjct: 592 MVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAM 624
Score = 64 (27.6 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 34/135 (25%), Positives = 56/135 (41%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLL-EAGKRFE--NDGVRPNWS---- 66
+V A E MD + L S + + V + + L E GK F + +R S
Sbjct: 391 DVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEV 450
Query: 67 TFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIR 125
TF + AC ++D G Q H ++ + + + L +D+Y + I A+
Sbjct: 451 TFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSL--IDMYAKCGDIKFAQSVFN 508
Query: 126 NMQ-IDASSVVWETL 139
M+ ID +S W L
Sbjct: 509 EMETIDVAS--WNAL 521
Score = 51 (23.0 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 16/81 (19%), Positives = 38/81 (46%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR-FEN----DGVRPNWSTFVG 70
+ AL ++D +K+ + + +L+ C + L++ G+ FE+ G+ P +
Sbjct: 532 RQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTC 591
Query: 71 VITACGCFGAVDEGFQHFESV 91
++ G G +D+ + E +
Sbjct: 592 MVRLLGRSGQLDKAMKLIEGI 612
>TAIR|locus:2130354 [details] [associations]
symbol:AT4G14820 "AT4G14820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL161540 EMBL:Z97337 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF12854 HOGENOM:HOG000237569 IPI:IPI00529570 PIR:C71411
RefSeq:NP_193218.1 UniGene:At.65379 ProteinModelPortal:O23337
SMR:O23337 EnsemblPlants:AT4G14820.1 GeneID:827139
KEGG:ath:AT4G14820 GeneFarm:3141 TAIR:At4g14820 eggNOG:NOG309125
InParanoid:O23337 OMA:VLWHSEK PhylomeDB:O23337
ProtClustDB:CLSN2685361 Genevestigator:O23337 Uniprot:O23337
Length = 722
Score = 181 (68.8 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 36/85 (42%), Positives = 54/85 (63%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
R + + V PN TFVGV+ C G V+EG + F S+T +Y+I P LEH+ +VDL+GR
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
+ EA E I +M + ++ V+W +L
Sbjct: 495 NLLREALEVIESMPVASNVVIWGSL 519
Score = 164 (62.8 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 37/89 (41%), Positives = 55/89 (61%)
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR------TLRIKK 215
+K K AGY+P VL D+++E K+ + SE+LA+ +GL++ +RI K
Sbjct: 618 SKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVK 677
Query: 216 NLRICGECHNFIKKLSSIENREIIVRDKT 244
NLR+C +CH F K +S + REIIVRD+T
Sbjct: 678 NLRVCEDCHLFFKLVSKVYEREIIVRDRT 706
Score = 63 (27.2 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 21/82 (25%), Positives = 35/82 (42%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA K FE + V P+ +++ACG G + +E + + D+ +
Sbjct: 195 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN-DVRMDTHLLTAL 253
Query: 108 VDLYGRLQKIAEAREFIRNMQI 129
V +Y + AREF R M +
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSV 275
Score = 53 (23.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 19/95 (20%), Positives = 43/95 (45%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCM---DLKLLEAGKRF--E 57
N+ ++ CR V A ++ +++K+ + D + +++ C +++ A F E
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVT 92
ND VR + ++T G +D + F ++
Sbjct: 241 ND-VRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Score = 52 (23.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 19/92 (20%), Positives = 39/92 (42%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA + FE G++P+ + VI+AC G +D+ + S + L +
Sbjct: 327 EALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNAL 385
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+++Y + + R+ M + V W ++
Sbjct: 386 INMYAKCGGLDATRDVFEKMP-RRNVVSWSSM 416
Score = 40 (19.1 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR 55
+S + L E AL + ++K + + + +L C L+E GK+
Sbjct: 414 SSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK 466
>TAIR|locus:2056740 [details] [associations]
symbol:OTP85 "ORGANELLE TRANSCRIPT PROCESSING 85"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0009507 "chloroplast" evidence=IDA] [GO:0031425
"chloroplast RNA processing" evidence=IMP] [GO:0016556 "mRNA
modification" evidence=RCA] InterPro:IPR011990 EMBL:AC004138
InterPro:IPR002885 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 GO:GO:0031425 HOGENOM:HOG000237569
EMBL:AF517844 IPI:IPI00532421 PIR:H84442 RefSeq:NP_178398.1
UniGene:At.41442 ProteinModelPortal:Q8LK93 SMR:Q8LK93 PaxDb:Q8LK93
PRIDE:Q8LK93 EnsemblPlants:AT2G02980.1 GeneID:814827
KEGG:ath:AT2G02980 GeneFarm:3321 TAIR:At2g02980 eggNOG:NOG294028
InParanoid:O80613 OMA:PTLINMY PhylomeDB:Q8LK93
ProtClustDB:CLSN2683708 Genevestigator:Q8LK93 Uniprot:Q8LK93
Length = 603
Score = 194 (73.4 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 35/79 (44%), Positives = 56/79 (70%)
Query: 165 KDAGYMPYTEYVLR-DLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
K +GY+P T V+ +++ + KE Y SE+LA+ +GL++TPPG T+R+ KNLR+C +C
Sbjct: 507 KLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDC 566
Query: 224 HNFIKKLSSIENREIIVRD 242
HN K +S I R++++RD
Sbjct: 567 HNAAKLISLIFGRKVVLRD 585
Score = 148 (57.2 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 27/86 (31%), Positives = 51/86 (59%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+R ++ V+P+ TF+G++ AC G V+EG ++F + + I P+++H+ +VDL R
Sbjct: 320 ERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSR 379
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
+ +A EFI + I + ++W L
Sbjct: 380 AGNLEDAYEFIDKLPISPTPMLWRIL 405
Score = 60 (26.2 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
DG+ P+ TF ++ AC A++EG Q H S+ D N + L +++Y + +
Sbjct: 123 DGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTL--INMYTECEDV 180
Query: 118 AEAR 121
AR
Sbjct: 181 DSAR 184
Score = 56 (24.8 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 12/79 (15%), Positives = 35/79 (44%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
++PN T + V+++C G++D G + + + ++ ++D++ + + +A
Sbjct: 226 LKPNEITLLSVLSSCALLGSLDLG-KWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDA 284
Query: 121 REFIRNMQIDASSVVWETL 139
M+ + W +
Sbjct: 285 VSIFEKMRYKDTQA-WSAM 302
Score = 46 (21.3 bits), Expect = 7.7e-17, Sum P(2) = 7.7e-17
Identities = 26/107 (24%), Positives = 40/107 (37%)
Query: 29 GIFLDSPDIIELLNVCMDLKLLEAGKRFE----NDGVRPN---WSTFVGVITACGCFGAV 81
GI D+ LL C K LE G++ G+ N T + + T C V
Sbjct: 124 GILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE---DV 180
Query: 82 DEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQ 128
D F+ + + P + + ++ Y R + EA R MQ
Sbjct: 181 DSARCVFDRI-----VEPCVVCYNAMITGYARRNRPNEALSLFREMQ 222
Score = 44 (20.5 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 13/92 (14%), Positives = 43/92 (46%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTF 68
+ + ++ + +++++ + D + LLN C +E G+++ + G+ P+ +
Sbjct: 311 KAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHY 370
Query: 69 VGVITACGCFGAVDEGFQHFESVTRDYDINPT 100
++ G +++ ++ + + I+PT
Sbjct: 371 GSMVDLLSRAGNLEDAYEFIDKLP----ISPT 398
>TAIR|locus:2090990 [details] [associations]
symbol:AT3G14330 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB022220 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00545125 RefSeq:NP_188050.1
UniGene:At.53310 ProteinModelPortal:Q9LUL5 PaxDb:Q9LUL5
PRIDE:Q9LUL5 EnsemblPlants:AT3G14330.1 GeneID:820653
KEGG:ath:AT3G14330 GeneFarm:3442 TAIR:At3g14330 eggNOG:NOG291469
InParanoid:Q9LUL5 OMA:VCGHSER PhylomeDB:Q9LUL5
ProtClustDB:CLSN2684926 Genevestigator:Q9LUL5 Uniprot:Q9LUL5
Length = 710
Score = 179 (68.1 bits), Expect = 5.3e-27, Sum P(3) = 5.3e-27
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
+GY P T VL D+D+E K SERLA Y LI T G +RI KNLR+C +CH++
Sbjct: 617 SGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSW 676
Query: 227 IKKLSSIENREIIVRD 242
+K +S + R I++RD
Sbjct: 677 MKIVSQVTRRVIVLRD 692
Score = 144 (55.7 bits), Expect = 5.3e-27, Sum P(3) = 5.3e-27
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV P+ TFV +++ C G + G FE + ++ ++P LEH+ +VD+ GR KI E
Sbjct: 433 GVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKE 492
Query: 120 AREFIRNMQIDASSVVWETL 139
A + I M S+ +W +L
Sbjct: 493 AVKVIETMPFKPSASIWGSL 512
Score = 58 (25.5 bits), Expect = 3.8e-18, Sum P(3) = 3.8e-18
Identities = 15/91 (16%), Positives = 41/91 (45%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
++ + + + +W+T ++ AC A+ G + + + + P + ++D+YG+
Sbjct: 326 RKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE-KPDVPLLNSLMDMYGK 384
Query: 114 LQKIAEAREFIRNMQIDASSVVWET-LEKYA 143
++ +R + ++ + W L YA
Sbjct: 385 CGEVEYSRR-VFDVMLTKDLASWNIMLNCYA 414
Score = 44 (20.5 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 16/82 (19%), Positives = 35/82 (42%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG----KRFEND-GVRPNWSTFV 69
++ + + + + G+ D + LL+ C D L E G +R + + V P +
Sbjct: 419 IEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYA 478
Query: 70 GVITACGCFGAVDEGFQHFESV 91
++ G G + E + E++
Sbjct: 479 CLVDILGRAGKIKEAVKVIETM 500
Score = 37 (18.1 bits), Expect = 5.3e-27, Sum P(3) = 5.3e-27
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 41 LNVCMDLKLLEAGK 54
L C+DLK L G+
Sbjct: 243 LKACVDLKDLRVGR 256
>TAIR|locus:2034456 [details] [associations]
symbol:AT1G31920 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC079041 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK226634 IPI:IPI00541310 PIR:D86443 RefSeq:NP_174474.1
UniGene:At.17278 ProteinModelPortal:Q9C6T2 SMR:Q9C6T2
EnsemblPlants:AT1G31920.1 GeneID:840082 KEGG:ath:AT1G31920
GeneFarm:3171 TAIR:At1g31920 eggNOG:NOG324786 InParanoid:Q9C6T2
OMA:MEWQLKF PhylomeDB:Q9C6T2 ProtClustDB:CLSN2682592
Genevestigator:Q9C6T2 Uniprot:Q9C6T2
Length = 606
Score = 194 (73.4 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 34/79 (43%), Positives = 55/79 (69%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K GY P +L ++D+E K++ S+++A+A+GL+ TPPG ++I +NLR+C +CH
Sbjct: 511 KFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCH 570
Query: 225 NFIKKLSSIENREIIVRDK 243
+ KK+S I REI+VRD+
Sbjct: 571 TYTKKISMIYEREIVVRDR 589
Score = 143 (55.4 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 28/80 (35%), Positives = 47/80 (58%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+G+ P+ +V V+ AC G V EG + F + ++ + PT EH+ +VDL GR +
Sbjct: 329 EGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLE 388
Query: 119 EAREFIRNMQIDASSVVWET 138
EA E I+++ I+ + V+W T
Sbjct: 389 EALETIQSIPIEKNDVIWRT 408
Score = 59 (25.8 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR-FEN---DG-VRPNWSTF 68
E ++AL + K+ G+ D + +LN C L++ G+R F +G V P +
Sbjct: 315 EGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHY 374
Query: 69 VGVITACGCFGAVDEGFQHFESV 91
++ G G ++E + +S+
Sbjct: 375 GCLVDLLGRAGLLEEALETIQSI 397
>TAIR|locus:2144143 [details] [associations]
symbol:AT5G06540 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AP002543 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854 HOGENOM:HOG000237569
IPI:IPI00525372 RefSeq:NP_196272.1 UniGene:At.65494
ProteinModelPortal:Q9FG16 SMR:Q9FG16 PRIDE:Q9FG16
EnsemblPlants:AT5G06540.1 GeneID:830542 KEGG:ath:AT5G06540
GeneFarm:3536 TAIR:At5g06540 eggNOG:NOG262142 InParanoid:Q9FG16
OMA:SIMINGY PhylomeDB:Q9FG16 ProtClustDB:CLSN2686880
ArrayExpress:Q9FG16 Genevestigator:Q9FG16 Uniprot:Q9FG16
Length = 622
Score = 189 (71.6 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY T D+D+E KE SE+LA+AYG++ T PG T+RI KNLR+C +CH
Sbjct: 530 GYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVT 589
Query: 228 KKLSSIENREIIVRDK 243
K +S + RE+IVRD+
Sbjct: 590 KLISEVYGRELIVRDR 605
Score = 146 (56.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G P TF V++AC G V++G + +E++ +D+ I P LEH+ IVD+ GR K+AE
Sbjct: 345 GFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAE 404
Query: 120 AREFIRNMQIDASSVV 135
A FI M + ++ +
Sbjct: 405 AENFILKMHVKPNAPI 420
Score = 95 (38.5 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 34/135 (25%), Positives = 66/135 (48%)
Query: 10 CREREVKAALEVMDKLKNIGIFLDSPDIIELL-NVCMDLKLLEAGKRFENDGVRPNWSTF 68
C+ V+ A E+ D++ + +F S I N C + K ++ + + +GV N +
Sbjct: 194 CKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFE-KAIDLFEFMKREGVVANETVM 252
Query: 69 VGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG--IVDLYGRLQKIAEAREFIRN 126
V VI++C GA++ G + +E V + + T+ LG +VD++ R I +A
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSH---MTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 127 MQIDASSVVWETLEK 141
+ + S+ W ++ K
Sbjct: 310 LP-ETDSLSWSSIIK 323
>TAIR|locus:2102514 [details] [associations]
symbol:AT3G56550 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 EMBL:AL163972
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:DQ446769 IPI:IPI00541669 PIR:T49056 RefSeq:NP_191214.1
UniGene:At.65282 ProteinModelPortal:Q9LXY5 SMR:Q9LXY5
EnsemblPlants:AT3G56550.1 GeneID:824822 KEGG:ath:AT3G56550
GeneFarm:3526 TAIR:At3g56550 eggNOG:NOG269480 InParanoid:Q9LXY5
OMA:CSHQGLV PhylomeDB:Q9LXY5 ProtClustDB:CLSN2684194
Genevestigator:Q9LXY5 Uniprot:Q9LXY5
Length = 581
Score = 177 (67.4 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 38/78 (48%), Positives = 47/78 (60%)
Query: 167 AGYMPY-TEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
AGY P + L T SE+LA+AYGL+ T G TLRI KNLR+C +CH+
Sbjct: 487 AGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHS 546
Query: 226 FIKKLSSIENREIIVRDK 243
F K +S NREIIVRD+
Sbjct: 547 FTKYVSKAFNREIIVRDR 564
Score = 157 (60.3 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GVRPN TF+G++ C G V EG +HFE ++ + + P ++H+ +VDLYGR ++
Sbjct: 304 GVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLEN 363
Query: 120 AREFIRNMQIDASSVVWETL 139
+ E I V+W TL
Sbjct: 364 SLEMIYASSCHEDPVLWRTL 383
Score = 51 (23.0 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 16/86 (18%), Positives = 35/86 (40%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
KR N+GV + T V ++++C A++ G + D + ++D+Y +
Sbjct: 197 KRMGNEGVCGDSYTLVALLSSCAHVSALNMGVM-LHRIACDIRCESCVFVSNALIDMYAK 255
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
+ A M+ + W ++
Sbjct: 256 CGSLENAIGVFNGMR-KRDVLTWNSM 280
>TAIR|locus:2019160 [details] [associations]
symbol:AT1G74630 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011765 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AK220733
EMBL:AK220737 IPI:IPI00540769 PIR:D96775 RefSeq:NP_177601.1
UniGene:At.34855 UniGene:At.70345 ProteinModelPortal:Q9CA54
SMR:Q9CA54 PRIDE:Q9CA54 EnsemblPlants:AT1G74630.1 GeneID:843802
KEGG:ath:AT1G74630 GeneFarm:3465 TAIR:At1g74630 eggNOG:NOG304289
HOGENOM:HOG000237569 InParanoid:Q9CA54 OMA:KVFDEMH PhylomeDB:Q9CA54
ProtClustDB:CLSN2682262 Genevestigator:Q9CA54 Uniprot:Q9CA54
Length = 643
Score = 169 (64.5 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV P+ +F+ ++ AC G ++EG +F + R Y I P +EH+ +VDLYGR K+ +
Sbjct: 366 GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQK 425
Query: 120 AREFIRNMQIDASSVVWETL 139
A +FI M I +++VW TL
Sbjct: 426 AYDFICQMPIPPTAIVWRTL 445
Score = 166 (63.5 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
K +AGY P L D+++E KE + SE+LA+A+ L G +RI KNLRIC +C
Sbjct: 547 KDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDC 606
Query: 224 HNFIKKLSSIENREIIVRDK 243
H +K S + EI+VRD+
Sbjct: 607 HAVMKLTSKVYGVEILVRDR 626
Score = 68 (29.0 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 21/87 (24%), Positives = 37/87 (42%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEG-FQHFESVTRDYDINPTLEHFLGIVDLYG 112
+ + G+ PN + GV++AC G+ + G H Y ++ + L +D+Y
Sbjct: 258 RELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNAL--IDMYS 315
Query: 113 RLQKIAEAREFIRNMQIDASSVVWETL 139
R + AR MQ V W ++
Sbjct: 316 RCGNVPMARLVFEGMQEKRCIVSWTSM 342
Score = 49 (22.3 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 4 SELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF 56
S + L + + A+ + +++ G+ D I LL+ C L+E G+ +
Sbjct: 341 SMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDY 393
Score = 42 (19.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 23/112 (20%), Positives = 40/112 (35%)
Query: 30 IFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWST--FVGVITACGCFGAVDEGFQH 87
+F DS ++ + + L G + ++ + FVG T G +G G
Sbjct: 102 VFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGT-TLIGMYGGC--GCVE 158
Query: 88 FESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
F D P L + ++ R +A ARE M + + W +
Sbjct: 159 FARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLV-RNHTSWNVM 209
Score = 40 (19.1 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 50 LEAGKR-FENDGVRPN--WSTFVGVITACGCFGAVDEGFQHFESVTR 93
LE+ KR F R + WST + I G F +E F +F + R
Sbjct: 219 LESAKRIFSEMPHRDDVSWSTMIVGIAHNGSF---NESFLYFRELQR 262
>TAIR|locus:2091546 [details] [associations]
symbol:AT3G13770 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AP001307 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00518949 RefSeq:NP_187990.1
UniGene:At.43032 UniGene:At.53299 ProteinModelPortal:Q9LIC3
SMR:Q9LIC3 EnsemblPlants:AT3G13770.1 GeneID:820586
KEGG:ath:AT3G13770 GeneFarm:3533 TAIR:At3g13770 eggNOG:NOG263023
InParanoid:Q9LIC3 OMA:NEFTFAT PhylomeDB:Q9LIC3
ProtClustDB:CLSN2684809 Genevestigator:Q9LIC3 Uniprot:Q9LIC3
Length = 628
Score = 203 (76.5 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 41/81 (50%), Positives = 54/81 (66%)
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
K K AGY+P VL D+D+E KEK SE+LA+ +GLI+T G +R+ KNLRIC +
Sbjct: 531 KMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVD 590
Query: 223 CHNFIKKLSSIENREIIVRDK 243
CHNF K S + RE+ +RDK
Sbjct: 591 CHNFAKIFSKVFEREVSLRDK 611
Score = 113 (44.8 bits), Expect = 9.8e-25, Sum P(2) = 9.8e-25
Identities = 31/138 (22%), Positives = 64/138 (46%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
+S L + ++K A E+ + L + + I + +D + LE R ++G+
Sbjct: 192 SSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS 251
Query: 63 PNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
PN+ T+ ++TA +D G Q H + R+ L++ L +D+Y + ++ AR
Sbjct: 252 PNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL--IDMYSKCGNLSYAR 309
Query: 122 EFIRNMQIDASSVVWETL 139
NM + +++ W +
Sbjct: 310 RLFDNMP-ERTAISWNAM 326
Score = 104 (41.7 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFES-VTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
V+P+ T + V++ C D G F+ V +Y P EH+ IVD+ GR +I E
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 120 AREFIRNM 127
A EFI+ M
Sbjct: 412 AFEFIKRM 419
Score = 69 (29.3 bits), Expect = 8.1e-23, Sum P(3) = 8.1e-23
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEH-FLG--IVDLYGR 113
+DG +PN TF V+T+C + G Q H V +YD H F+G ++D+Y +
Sbjct: 147 SDG-KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD-----SHIFVGSSLLDMYAK 200
Query: 114 LQKIAEARE 122
+I EARE
Sbjct: 201 AGQIKEARE 209
Score = 44 (20.5 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 40 LLNVCMDLKLLEAGKR 55
LLN C+D + L G+R
Sbjct: 58 LLNACLDKRALRDGQR 73
Score = 40 (19.1 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 17/80 (21%), Positives = 34/80 (42%)
Query: 13 REVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR-FEND-----GVRPNWS 66
REV +M K + D+ ++ +L+ C ++ + G F+ G +P
Sbjct: 337 REVLELFRLMRDEKRVKP--DAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTE 394
Query: 67 TFVGVITACGCFGAVDEGFQ 86
+ ++ G G +DE F+
Sbjct: 395 HYGCIVDMLGRAGRIDEAFE 414
>TAIR|locus:2103483 [details] [associations]
symbol:OTP84 "ORGANELLE TRANSCRIPT PROCESSING 84"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0031425 "chloroplast RNA processing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
EMBL:AL133248 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
GO:GO:0031425 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:BT008634
IPI:IPI00527739 PIR:T46179 RefSeq:NP_191302.2 UniGene:At.34834
ProteinModelPortal:Q7Y211 SMR:Q7Y211 EnsemblPlants:AT3G57430.1
GeneID:824910 KEGG:ath:AT3G57430 GeneFarm:3528 TAIR:At3g57430
eggNOG:NOG252051 InParanoid:Q7Y211 OMA:VAKNLRV PhylomeDB:Q7Y211
ProtClustDB:CLSN2680439 Genevestigator:Q7Y211 Uniprot:Q7Y211
Length = 890
Score = 185 (70.2 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
+ + GY+P T VL +++++ KE SE+LA+A+G+++T PG +R+ KNLR+C +
Sbjct: 793 RMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCND 852
Query: 223 CHNFIKKLSSIENREIIVRD 242
CH K +S I +REII+RD
Sbjct: 853 CHLATKFISKIVDREIILRD 872
Score = 150 (57.9 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV+PN TF+ V AC G VDEG + F + DY + P+ +H+ +VDL GR +I E
Sbjct: 613 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 672
Query: 120 AREFIRNMQIDASSV-VWETL 139
A + + M D + W +L
Sbjct: 673 AYQLMNMMPRDFNKAGAWSSL 693
Score = 82 (33.9 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 28/85 (32%), Positives = 40/85 (47%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVD--EGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
E+ G+ N +T GV+ AC GA E F V R D + +++ L +D+Y RL
Sbjct: 397 ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV-VKRGLDRDRFVQNTL--MDMYSRL 453
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
KI A M+ D V W T+
Sbjct: 454 GKIDIAMRIFGKME-DRDLVTWNTM 477
Score = 74 (31.1 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFL--G 106
LEA + ++ V P+ T V V+TAC + EG + V Y + L F+
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNL-PMPEGLMMGKQV-HAYGLRKGELNSFIINT 241
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+V +YG+L K+A ++ + + V W T+
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTV 273
Score = 69 (29.3 bits), Expect = 9.3e-18, Sum P(2) = 9.3e-18
Identities = 22/81 (27%), Positives = 38/81 (46%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ L LC+ ++ ALE + ++ G+ D I +L C L++L GK ++
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 63 P---NWSTFVG---VITACGC 77
+ ++FVG V C C
Sbjct: 331 NGSLDENSFVGSALVDMYCNC 351
Score = 58 (25.5 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 20/103 (19%), Positives = 43/103 (41%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF----END-GVRPNWSTFVGVI 72
A++++ + G+ + I + C +++ G R + D GV P+ + V+
Sbjct: 602 AIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVV 661
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
G G + E +Q + RD++ LG ++ L+
Sbjct: 662 DLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLE 704
Score = 51 (23.0 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 27/93 (29%), Positives = 43/93 (46%)
Query: 2 LNSELK-HLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDG 60
L S+++ +L RE A L +D + +GI D+ LL DL+ +E GK+
Sbjct: 69 LRSKVRSNLLRE----AVLTYVDMIV-LGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 61 VRPNW--------STFVGVITACGCFGAVDEGF 85
+ + +T V + CG FGAV + F
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVF 156
Score = 51 (23.0 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 21/106 (19%), Positives = 48/106 (45%)
Query: 36 DIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRD 94
D + LL+ +L+ + K ++PN T + ++ +C A+ +G + H ++ +
Sbjct: 489 DALLLLHKMQNLER-KVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 547
Query: 95 YDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVV-WETL 139
+ + L VD+Y + + +R+ QI +V+ W +
Sbjct: 548 LATDVAVGSAL--VDMYAKCGCLQMSRKVFD--QIPQKNVITWNVI 589
Score = 46 (21.3 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEA---GKRFEND 59
NS + LC + + ALE + + + S ++ ++ C +L + E GK+
Sbjct: 168 NSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY 227
Query: 60 GVRPN-WSTFVGVITACGCFG 79
G+R ++F+ + T +G
Sbjct: 228 GLRKGELNSFI-INTLVAMYG 247
Score = 44 (20.5 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 35 PDIIELLNV---CMDLKLLEAGKRFENDGVRPNWSTFVGVITA-------CGC 77
P+ I L+ + C L L GK ++ N +T V V +A CGC
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 567
>TAIR|locus:2060640 [details] [associations]
symbol:OTP81 "ORGANELLE TRANSCRIPT PROCESSING 81"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0031425 "chloroplast RNA processing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC005496 Pfam:PF01535 TIGRFAMs:TIGR00756
UniGene:At.38446 UniGene:At.49361 GO:GO:0031425
HOGENOM:HOG000237569 EMBL:AY500319 IPI:IPI00520465 PIR:C84700
RefSeq:NP_180537.1 ProteinModelPortal:O82380 SMR:O82380
PRIDE:O82380 EnsemblPlants:AT2G29760.1 GeneID:817526
KEGG:ath:AT2G29760 GeneFarm:3355 TAIR:At2g29760 eggNOG:NOG235387
InParanoid:O82380 OMA:FVWSAMI PhylomeDB:O82380
ProtClustDB:CLSN2683829 Genevestigator:O82380 Uniprot:O82380
Length = 738
Score = 192 (72.6 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 38/82 (46%), Positives = 55/82 (67%)
Query: 163 KKKDAGYMPYTEYVLRDLDQEA-KEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
K K GY P VL+ +++E KE+ SE+LA+ YGLIST + +R+ KNLR+CG
Sbjct: 640 KLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCG 699
Query: 222 ECHNFIKKLSSIENREIIVRDK 243
+CH+ K +S + +REIIVRD+
Sbjct: 700 DCHSVAKLISQLYDREIIVRDR 721
Score = 140 (54.3 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 41/140 (29%), Positives = 71/140 (50%)
Query: 2 LNSELKHLCRE-REVKAALEVMDKLKNIGIFLDSPDIIEL-LNVCMDLKLLEAGKRFEND 59
+ S L H+ + +++ + EV + ++ +F+ S I L ++ C + + ++ + +
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN-EAVDMFYKMQEA 460
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
V+PN TF V AC G VDE F + +Y I P +H+ IVD+ GR + +
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520
Query: 120 AREFIRNMQIDASSVVWETL 139
A +FI M I S+ VW L
Sbjct: 521 AVKFIEAMPIPPSTSVWGAL 540
Score = 98 (39.6 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
Identities = 28/98 (28%), Positives = 52/98 (53%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHFLG 106
K LE K+ E++ V+ + T VGV++AC ++ G Q + + ++N TL +
Sbjct: 215 KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN--A 272
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWET-LEKYA 143
++D+Y + I +A+ M+ + +V W T L+ YA
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYA 309
Score = 58 (25.5 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 15/76 (19%), Positives = 33/76 (43%)
Query: 64 NWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREF 123
N T V ++AC GA++ G + S + + I ++ +Y + + ++RE
Sbjct: 364 NQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Query: 124 IRNMQIDASSVVWETL 139
+++ VW +
Sbjct: 423 FNSVE-KRDVFVWSAM 437
>TAIR|locus:2057574 [details] [associations]
symbol:AT2G33760 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:U78721 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00521080 PIR:C84749 RefSeq:NP_180932.1 UniGene:At.66304
UniGene:At.68773 ProteinModelPortal:P93011 SMR:P93011
EnsemblPlants:AT2G33760.1 GeneID:817942 KEGG:ath:AT2G33760
GeneFarm:3149 TAIR:At2g33760 eggNOG:NOG259057 InParanoid:P93011
OMA:SPSNYTF PhylomeDB:P93011 ProtClustDB:CLSN2683510
Genevestigator:P93011 Uniprot:P93011
Length = 583
Score = 183 (69.5 bits), Expect = 6.3e-26, Sum P(2) = 6.3e-26
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K+ GY P +E V+ +++E KE Y SE+LAVA+GL+ T + I KNLRIC +CH
Sbjct: 489 KEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVDV-AITIVKNLRICEDCH 547
Query: 225 NFIKKLSSIENREIIVRDK 243
+ K +S + NR+I VRDK
Sbjct: 548 SAFKYISIVSNRQITVRDK 566
Score = 144 (55.7 bits), Expect = 6.3e-26, Sum P(2) = 6.3e-26
Identities = 40/120 (33%), Positives = 64/120 (53%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-GVRPNWSTFVGVI 72
+V A EV DK+K + + I + +E + E+D G PN TFV V+
Sbjct: 258 DVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVL 317
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDAS 132
+AC G V+EG ++ +T+ Y + P +EH + +VD+ GR + EA +FI Q+DA+
Sbjct: 318 SACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIH--QLDAT 375
Score = 93 (37.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEG-FQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+ G P+ +TFV +++AC GAV G + H ++ D+N L +++LY R
Sbjct: 198 QMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLG--TALINLYSR 255
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
+ +ARE M+ + + W +
Sbjct: 256 CGDVGKAREVFDKMK-ETNVAAWTAM 280
Score = 63 (27.2 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 21/87 (24%), Positives = 38/87 (43%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYG 112
+R + V P+ TF VI +C A+ G H +V + ++ ++ +V Y
Sbjct: 96 RRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQ--AALVTFYS 153
Query: 113 RLQKIAEAREFIRNMQIDASSVVWETL 139
+ + AR+ M + S V W +L
Sbjct: 154 KCGDMEGARQVFDRMP-EKSIVAWNSL 179
>TAIR|locus:2078653 [details] [associations]
symbol:AT3G02010 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011664 EMBL:AC010797
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00527957 RefSeq:NP_186850.1 UniGene:At.53156
ProteinModelPortal:Q9S7F4 SMR:Q9S7F4 PRIDE:Q9S7F4
EnsemblPlants:AT3G02010.1 GeneID:821085 KEGG:ath:AT3G02010
GeneFarm:3358 TAIR:At3g02010 eggNOG:NOG280481 InParanoid:Q9S7F4
OMA:PAYSWVE PhylomeDB:Q9S7F4 ProtClustDB:CLSN2685183
Genevestigator:Q9S7F4 Uniprot:Q9S7F4
Length = 825
Score = 190 (71.9 bits), Expect = 6.8e-26, Sum P(2) = 6.8e-26
Identities = 39/75 (52%), Positives = 50/75 (66%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY P T V++D+D++ K + Y SERLAVA+ LISTP G + + KNLR C +CH I
Sbjct: 733 GYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAI 792
Query: 228 KKLSSIENREIIVRD 242
K +S I REI VRD
Sbjct: 793 KLISKIVKREITVRD 807
Score = 141 (54.7 bits), Expect = 6.8e-26, Sum P(2) = 6.8e-26
Identities = 26/86 (30%), Positives = 53/86 (61%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K E+ G++P+ + +GV+TAC G V++G ++F++++ Y I P +H+ ++DL GR
Sbjct: 543 KMIES-GLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGR 601
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
+ AEA + + M + ++W ++
Sbjct: 602 NGRFAEAEKLMDEMPFEPDEIMWSSV 627
Score = 72 (30.4 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ +R + STF V+ A F ++ G Q + R ++ G+VD+Y +
Sbjct: 442 KMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGS-GLVDMYAKC 500
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
I +A + M D ++V W L
Sbjct: 501 GSIKDAVQVFEEMP-DRNAVSWNAL 524
Score = 41 (19.5 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL-EKYAQ 144
+VD+Y + + EA +++ ++V W L Y Q
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISGYVQ 429
>TAIR|locus:2131631 [details] [associations]
symbol:AT4G35130 "AT4G35130" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 EMBL:AL022023 EMBL:AL161586 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00533040 PIR:T05783 RefSeq:NP_195239.1 UniGene:At.65456
ProteinModelPortal:O49619 SMR:O49619 PRIDE:O49619
EnsemblPlants:AT4G35130.1 GeneID:829665 KEGG:ath:AT4G35130
GeneFarm:3322 TAIR:At4g35130 eggNOG:NOG324832 InParanoid:O49619
OMA:HDNTGCY PhylomeDB:O49619 ProtClustDB:CLSN2685935
Genevestigator:O49619 Uniprot:O49619
Length = 804
Score = 171 (65.3 bits), Expect = 5.5e-25, Sum P(3) = 5.5e-25
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V PN STF ++ AC G VDEG+++FES+ R+Y I+P +EH+ ++DL GR + A
Sbjct: 528 VNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAA 587
Query: 121 REFIRNMQIDASSVVWETL 139
+ F+ M ++ +W +L
Sbjct: 588 KRFLEEMPFVPTARIWGSL 606
Score = 136 (52.9 bits), Expect = 5.5e-25, Sum P(3) = 5.5e-25
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREII 239
L + P+ + S RLA +GLIST GR + ++ N RIC +CH F++K S + REI+
Sbjct: 725 LVKSRSNSPRRH-SVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIV 783
Query: 240 VRD 242
V D
Sbjct: 784 VGD 786
Score = 47 (21.6 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 17/83 (20%), Positives = 38/83 (45%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGV 61
L L+ R ++ AL++ D++ FL + I + + ++ ++ R GV
Sbjct: 67 LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV 126
Query: 62 RPNWSTFVGVITACGCFGAVDEG 84
+ + T+ VI + +++EG
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEG 149
Score = 36 (17.7 bits), Expect = 5.5e-25, Sum P(3) = 5.5e-25
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 17 AALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPN-WSTFV 69
+ALE+ +L + + DS I +L + L G+ V+ WS +
Sbjct: 414 SALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI 467
>TAIR|locus:2148101 [details] [associations]
symbol:AT5G16860 "AT5G16860" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AL391141
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00533068 PIR:T51541
RefSeq:NP_197188.1 UniGene:At.54872 ProteinModelPortal:Q9LFL5
SMR:Q9LFL5 EnsemblPlants:AT5G16860.1 GeneID:831549
KEGG:ath:AT5G16860 GeneFarm:3540 TAIR:At5g16860 eggNOG:NOG251129
InParanoid:Q9LFL5 OMA:FTISCAL PhylomeDB:Q9LFL5
ProtClustDB:CLSN2686178 Genevestigator:Q9LFL5 Uniprot:Q9LFL5
Length = 850
Score = 203 (76.5 bits), Expect = 7.7e-25, Sum P(2) = 7.7e-25
Identities = 37/80 (46%), Positives = 54/80 (67%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
KD GY+P T + L D+D E K+ SE+LA+AYG+++TP G +RI KNLR+CG+CH
Sbjct: 755 KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCH 814
Query: 225 NFIKKLSSIENREIIVRDKT 244
+S I + +II+RD +
Sbjct: 815 TAFTYMSRIIDHDIILRDSS 834
Score = 118 (46.6 bits), Expect = 7.7e-25, Sum P(2) = 7.7e-25
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
F+ DGV T + V+ AC G +D+G ++F + + ++P EH+ +VDL GR
Sbjct: 575 FKLDGV-----TLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 629
Query: 116 KIAEAREFIRNMQIDASSVVW 136
++ A I M ++ VVW
Sbjct: 630 RLNAALRLIEEMPMEPPPVVW 650
Score = 81 (33.6 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21
Identities = 39/138 (28%), Positives = 60/138 (43%)
Query: 11 REREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKL-LEAGKRFEND-GVRPNWSTF 68
R R + A +V D++ ++ + IIE K+ LE R N+ G RP+ T
Sbjct: 174 RCRSLSDARKVFDEM-SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITL 232
Query: 69 VGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNM 127
V V+ C G G Q H +VT + N + + L VD+Y + + EA NM
Sbjct: 233 VNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL--VDMYAKCGMMDEANTVFSNM 290
Query: 128 QIDASSVVWETLEK-YAQ 144
+ V W + Y+Q
Sbjct: 291 SVK-DVVSWNAMVAGYSQ 307
Score = 75 (31.5 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 27/95 (28%), Positives = 41/95 (43%)
Query: 48 KLLEA-GKRFEND-GVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHF 104
K LE + FE D RPN T + AC A+ G Q H ++ + P
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN 517
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
++D+Y + I++AR NM + V W +L
Sbjct: 518 C-LIDMYAKCGSISDARLVFDNMMAK-NEVTWTSL 550
Score = 74 (31.1 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 20/89 (22%), Positives = 42/89 (47%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTL---EHFL--GIVDLY 111
+ G++PN T + V++ C GA+ G + H ++ D+ E+ + ++D+Y
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
Query: 112 GRLQKIAEAREFIRNMQIDASSVV-WETL 139
+ +K+ AR ++ VV W +
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Score = 62 (26.9 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 24/84 (28%), Positives = 40/84 (47%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
P+ TF V ACG +V G H S+ + N + + L V +Y R + +++AR
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNAL--VAMYSRCRSLSDAR 182
Query: 122 EFIRNMQIDASSVVWETL-EKYAQ 144
+ M + V W ++ E YA+
Sbjct: 183 KVFDEMSV-WDVVSWNSIIESYAK 205
Score = 37 (18.1 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 78 FGAVDEGFQHFESVTRDYDIN 98
F D G H+ S+ R Y N
Sbjct: 85 FPPSDAGVYHWNSLIRSYGDN 105
>TAIR|locus:2080727 [details] [associations]
symbol:MEF10 "mitochondrial RNA editing factor 10"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0016554 "cytidine to uridine editing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC008153 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00530970
RefSeq:NP_187753.1 UniGene:At.53270 ProteinModelPortal:Q9CAY1
SMR:Q9CAY1 PaxDb:Q9CAY1 PRIDE:Q9CAY1 EnsemblPlants:AT3G11460.1
GeneID:820319 KEGG:ath:AT3G11460 GeneFarm:3438 TAIR:At3g11460
eggNOG:NOG330951 InParanoid:Q9CAY1 OMA:GLITWNA PhylomeDB:Q9CAY1
ProtClustDB:CLSN2684416 Genevestigator:Q9CAY1 Uniprot:Q9CAY1
Length = 623
Score = 169 (64.5 bits), Expect = 9.6e-25, Sum P(2) = 9.6e-25
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+RP+ + FV V++AC G D+G + F ++ R+Y + P EH+ +VDL GR ++ E
Sbjct: 353 GIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDE 412
Query: 120 AREFIRNMQIDASSVVWETL 139
A EFI +M ++ VW L
Sbjct: 413 AMEFIESMPVEPDGAVWGAL 432
Score = 148 (57.2 bits), Expect = 9.6e-25, Sum P(2) = 9.6e-25
Identities = 29/66 (43%), Positives = 47/66 (71%)
Query: 179 DLDQEAKEKPQTYR--SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENR 236
D D+ +E T R SERLA+A+G++++ PG + + KNLR+C +CH F+K++S I +R
Sbjct: 541 DCDR-GEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDR 599
Query: 237 EIIVRD 242
+ +VRD
Sbjct: 600 QFVVRD 605
Score = 71 (30.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 31/138 (22%), Positives = 60/138 (43%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGV 61
LNS + + V+A + D++ G+ + I + +LE ++ ++ GV
Sbjct: 194 LNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGV 253
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
P+ T V V+++C GA G + + V + + P + + +Y R +A+AR
Sbjct: 254 CPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV-PNVFVSNASISMYARCGNLAKAR 312
Query: 122 EFIRNMQIDASSVVWETL 139
M + S V W +
Sbjct: 313 AVFDIMPVK-SLVSWTAM 329
Score = 49 (22.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 18/83 (21%), Positives = 39/83 (46%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
+V A + ++K G+ +DS ++ L+ +C + L G+ V+ + V V+
Sbjct: 136 KVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLN 195
Query: 74 A-----CGCFGAVDEGFQHFESV 91
+ C G+V+ G + F+ +
Sbjct: 196 SFITMYMKC-GSVEAGRRLFDEM 217
>TAIR|locus:505006130 [details] [associations]
symbol:AT1G18485 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC013354 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK229592 IPI:IPI00532648
PIR:E86318 RefSeq:NP_564054.1 UniGene:At.28671
ProteinModelPortal:Q0WN60 SMR:Q0WN60 PaxDb:Q0WN60 PRIDE:Q0WN60
EnsemblPlants:AT1G18485.1 GeneID:838429 KEGG:ath:AT1G18485
GeneFarm:3163 TAIR:At1g18485 eggNOG:NOG308609 OMA:CVIKACA
PhylomeDB:Q0WN60 ProtClustDB:CLSN2687856 ArrayExpress:Q0WN60
Genevestigator:Q0WN60 Uniprot:Q0WN60
Length = 970
Score = 187 (70.9 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 38/75 (50%), Positives = 48/75 (64%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY P T V DL +E K + SE+LA+ YGLI T G T+R+ KNLRIC +CHN
Sbjct: 878 GYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAA 937
Query: 228 KKLSSIENREIIVRD 242
K +S + REI+VRD
Sbjct: 938 KLISKVMEREIVVRD 952
Score = 134 (52.2 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 29/93 (31%), Positives = 51/93 (54%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA K FE G P+ TF+GV+TAC G + EG ++ + + + + P L+H+ +
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740
Query: 108 VDLYGRLQKIAEA-REFIRNMQIDASSVVWETL 139
+D+ GR ++ +A R M +A +W++L
Sbjct: 741 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSL 773
Score = 63 (27.2 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 11 REREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNW 65
+ + + +L+ ++K G+ DS + LL+ C LK L GK +R NW
Sbjct: 473 QSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR-NW 526
Score = 57 (25.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 19/90 (21%), Positives = 42/90 (46%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+A + + G+ P+ T +++AC ++ G + + R++ + L +L ++
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLS 539
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
LY ++ + M+ D S V W T+
Sbjct: 540 LYIHCGELCTVQALFDAME-DKSLVSWNTV 568
>TAIR|locus:2038603 [details] [associations]
symbol:AT2G27610 "AT2G27610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC006232 EMBL:AC005824 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00547006 PIR:G84674
RefSeq:NP_180329.1 UniGene:At.13265 UniGene:At.66363
ProteinModelPortal:Q9ZUW3 SMR:Q9ZUW3 PRIDE:Q9ZUW3
EnsemblPlants:AT2G27610.1 GeneID:817307 KEGG:ath:AT2G27610
GeneFarm:3453 TAIR:At2g27610 eggNOG:NOG320969 InParanoid:Q9ZUW3
OMA:IVAWSAM PhylomeDB:Q9ZUW3 ProtClustDB:CLSN2683516
Genevestigator:Q9ZUW3 Uniprot:Q9ZUW3
Length = 868
Score = 236 (88.1 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 46/78 (58%), Positives = 56/78 (71%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
KD GY P T YVL+D+D E KE SERLA+A+GLI+TP G L I KNLR+CG+CH
Sbjct: 772 KDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCH 831
Query: 225 NFIKKLSSIENREIIVRD 242
IK ++ IE REI+VRD
Sbjct: 832 LVIKLIAKIEEREIVVRD 849
Score = 168 (64.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 43/150 (28%), Positives = 69/150 (46%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
+K L+ K + V+ + TF+GV AC G V+EG ++F+ + RD I PT EH
Sbjct: 578 MKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSC 637
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTXXXXXXXXXXXXXXXXNKKKD 166
+VDLY R ++ +A + I NM A S +W T+ + K +D
Sbjct: 638 MVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPED 697
Query: 167 -AGYMPYTEYVLRDLDQEAKEKPQTYRSER 195
A Y+ + D + + K + +ER
Sbjct: 698 SAAYVLLSNMYAESGDWQERAKVRKLMNER 727
Score = 82 (33.9 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 26/87 (29%), Positives = 41/87 (47%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GVRPN T+ ++TA + H + V +Y+ + T+ ++D Y +L K+ E
Sbjct: 392 GVRPNEFTYSVILTA---LPVISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEE 446
Query: 120 AREFIRNMQIDASSVVWET-LEKYAQT 145
A + + D V W L YAQT
Sbjct: 447 AAKVFSGID-DKDIVAWSAMLAGYAQT 472
Score = 75 (31.5 bits), Expect = 7.8e-24, Sum P(2) = 7.8e-24
Identities = 26/124 (20%), Positives = 53/124 (42%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITAC 75
K +V D++K + + I M+ ++L R +N+G +PN TF +
Sbjct: 145 KDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVL 204
Query: 76 GCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVV 135
G G Q V ++ ++ T+ +++LY + + +AR ++ S V
Sbjct: 205 AEEGVGGRGLQVHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVT 262
Query: 136 WETL 139
W ++
Sbjct: 263 WNSM 266
Score = 64 (27.6 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 21/87 (24%), Positives = 38/87 (43%)
Query: 60 GVRPNWSTFVGVITACGCFGA-VDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
G++PN TF ++ C A + +G Q F ++ +L ++ +Y + I
Sbjct: 489 GIKPNEFTFSSILNVCAATNASMGQGKQ-FHGFAIKSRLDSSLCVSSALLTMYAKKGNIE 547
Query: 119 EAREFIRNMQIDASSVVWETL-EKYAQ 144
A E + Q + V W ++ YAQ
Sbjct: 548 SAEEVFKR-QREKDLVSWNSMISGYAQ 573
Score = 46 (21.3 bits), Expect = 8.3e-21, Sum P(2) = 8.3e-21
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKL-LEAGKRFENDGVRPNWSTFVGVI 72
E +AA+++ +L GI + +LNVC + GK+F ++ + + V
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533
Query: 73 TA 74
+A
Sbjct: 534 SA 535
>TAIR|locus:2130644 [details] [associations]
symbol:AT4G15720 "AT4G15720" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:Z97339 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL161542
HOGENOM:HOG000237570 EMBL:AY072074 EMBL:AY096603 IPI:IPI00537442
PIR:D71422 RefSeq:NP_193307.2 UniGene:At.33147 UniGene:At.48860
ProteinModelPortal:Q8VYH0 SMR:Q8VYH0 PRIDE:Q8VYH0
EnsemblPlants:AT4G15720.1 GeneID:827250 KEGG:ath:AT4G15720
GeneFarm:3138 TAIR:At4g15720 eggNOG:NOG266566 InParanoid:Q8VYH0
OMA:DCHEAFK PhylomeDB:Q8VYH0 ProtClustDB:CLSN2690297
Genevestigator:Q8VYH0 Uniprot:Q8VYH0
Length = 616
Score = 177 (67.4 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 176 VLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIEN 235
V D+D+EAK++ + ERLA+AYGL+ P G T+RI NLR+C +CH K +S I
Sbjct: 532 VFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVE 591
Query: 236 REIIVRD 242
REI+VRD
Sbjct: 592 REIVVRD 598
Score = 133 (51.9 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+ PN+ T +GV+ AC G V+EG ++ + Y + P H+ +VD+ GR ++ EA
Sbjct: 333 INPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEA 392
Query: 121 REFIRNMQIDAS--SVVWETL 139
E + +++ A +++W L
Sbjct: 393 YELAKTIEVGAEQGALLWGAL 413
Score = 73 (30.8 bits), Expect = 8.6e-18, Sum P(2) = 8.6e-18
Identities = 29/127 (22%), Positives = 62/127 (48%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
+AA+++ D++ I + ++ +L+ C L+ G + E GV P+ +
Sbjct: 319 EAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTC 378
Query: 71 VITACGCFGAVDEGFQHFESVTRDYDINPTL-EHFLGIVDLYGRLQKIAEA-REFIR-NM 127
V+ G FG VDE ++ +++ + L L L+GR++ ++EA + I+ N
Sbjct: 379 VVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQ 438
Query: 128 QIDASSV 134
Q+ ++ +
Sbjct: 439 QVTSAYI 445
Score = 64 (27.6 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 24/93 (25%), Positives = 38/93 (40%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K E+ V PN TF V AC G ++ + + + +VD+YG+
Sbjct: 120 KMHEDRPVPPNEYTFASVFKACSALAESRIG-KNIHARLEISGLRRNIVVSSSLVDMYGK 178
Query: 114 LQKIAEAREFIRNMQIDASSVV-WETL-EKYAQ 144
+ AR +M +VV W ++ YAQ
Sbjct: 179 CNDVETARRVFDSMIGYGRNVVSWTSMITAYAQ 211
Score = 52 (23.4 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHFLGIVDLYGRLQKIAEA 120
R N VI+AC G + G VTR Y+ N + ++D+Y + ++ A
Sbjct: 233 RANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVA--TSLLDMYAKCGSLSCA 290
Query: 121 RE-FIR 125
+ F+R
Sbjct: 291 EKIFLR 296
Score = 49 (22.3 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 22/117 (18%), Positives = 44/117 (37%)
Query: 6 LKHLCREREVKAALEVMDKLK-NIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPN 64
L H E A ++ L +G D+ + L+ + LK + ++ ++ PN
Sbjct: 35 LVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPN 94
Query: 65 WSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
++ VI+ G F+ + D + P F + + +AE+R
Sbjct: 95 VVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASV---FKACSALAESR 148
>TAIR|locus:2124137 [details] [associations]
symbol:DOT4 "DEFECTIVELY ORGANIZED TRIBUTARIES 4"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0010087 "phloem or xylem histogenesis"
evidence=IMP] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IMP] [GO:0010588 "cotyledon vascular tissue pattern
formation" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161549
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0010087 GO:GO:0048366
GO:GO:0010305 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL035526
GO:GO:0010588 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK221529
IPI:IPI00547122 PIR:T04867 RefSeq:NP_193610.1 UniGene:At.54400
ProteinModelPortal:Q9SN39 SMR:Q9SN39 PaxDb:Q9SN39 PRIDE:Q9SN39
EnsemblPlants:AT4G18750.1 GeneID:827609 KEGG:ath:AT4G18750
GeneFarm:3432 TAIR:At4g18750 eggNOG:NOG288811 InParanoid:Q9SN39
OMA:EGWRFFN PhylomeDB:Q9SN39 ProtClustDB:CLSN2685451
Genevestigator:Q9SN39 Uniprot:Q9SN39
Length = 871
Score = 189 (71.6 bits), Expect = 3.0e-23, Sum P(3) = 3.0e-23
Identities = 34/77 (44%), Positives = 52/77 (67%)
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
+ GY P T+Y L D ++ KE+ SE+LA+A G+IS+ G+ +R+ KNLR+CG+CH
Sbjct: 777 EEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHE 836
Query: 226 FIKKLSSIENREIIVRD 242
K +S + REI++RD
Sbjct: 837 MAKFMSKLTRREIVLRD 853
Score = 148 (57.2 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ + +FV ++ AC G VDEG++ F + + I PT+EH+ IVD+ R + +
Sbjct: 595 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 654
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTXXXXXXXXXXXXXXXXNKKKDAGYMPYTEYVLR- 178
A FI NM I + +W L + + ++ GY YVL
Sbjct: 655 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY-----YVLMA 709
Query: 179 DLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKK--NLRICGECHN 225
++ EA++ Q R + GL P + IK N+ + G+ N
Sbjct: 710 NIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSN 758
Score = 77 (32.2 bits), Expect = 3.0e-23, Sum P(3) = 3.0e-23
Identities = 22/92 (23%), Positives = 43/92 (46%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA K FE +G+ P+ T V+ C + +DEG + E + ++ D+ + +
Sbjct: 380 EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI-KENDLGFDIFVSNAL 438
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+D+Y + + EA M++ + W T+
Sbjct: 439 MDMYAKCGSMQEAELVFSEMRVK-DIISWNTI 469
Score = 61 (26.5 bits), Expect = 3.0e-23, Sum P(3) = 3.0e-23
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 1 DLNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEN 58
D N++L+ C ++ A++++ I D + +L +C D K L+ GK +N
Sbjct: 63 DANTQLRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDN 118
Score = 61 (26.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 11 REREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPN 64
RE A+++ ++++ GI D + +LN C +LL+ GKR ++ ++ N
Sbjct: 374 REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV-HEWIKEN 426
Score = 51 (23.0 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 19 LEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWS 66
L V ++ GI +D I+ + C D +L+ G+ + GV+ +S
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Score = 42 (19.8 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 49 LLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG-I 107
LLE KRF P+ T V+ AC A D+G + + R+ + H +
Sbjct: 489 LLEE-KRFS-----PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD--RHVANSL 540
Query: 108 VDLYGR 113
VD+Y +
Sbjct: 541 VDMYAK 546
>TAIR|locus:2013079 [details] [associations]
symbol:AT1G19720 "AT1G19720" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0009507 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC007797 EMBL:AC024609 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK229137 EMBL:AJ006040
IPI:IPI00522498 PIR:C86330 PIR:T52647 RefSeq:NP_173402.2
UniGene:At.16215 ProteinModelPortal:Q9FXH1 SMR:Q9FXH1 PaxDb:Q9FXH1
PRIDE:Q9FXH1 EnsemblPlants:AT1G19720.1 GeneID:838561
KEGG:ath:AT1G19720 GeneFarm:3162 TAIR:At1g19720 eggNOG:NOG325213
InParanoid:Q9FXH1 OMA:TWNIMIS PhylomeDB:Q9FXH1
ProtClustDB:CLSN2680057 Genevestigator:Q9FXH1 Uniprot:Q9FXH1
Length = 894
Score = 174 (66.3 bits), Expect = 7.6e-23, Sum P(3) = 7.6e-23
Identities = 34/84 (40%), Positives = 49/84 (58%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ + G+ PN T +I A G G VDEG + F S+ DY I P LEH +V LYGR
Sbjct: 615 QMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRA 674
Query: 115 QKIAEAREFIRNMQIDASSVVWET 138
++ EA +FI+ M I + + +WE+
Sbjct: 675 NRLEEALQFIQEMNIQSETPIWES 698
Score = 113 (44.8 bits), Expect = 7.6e-23, Sum P(3) = 7.6e-23
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGR--TLRIKKNLRICGECHNFIKKLSSIENRE 237
+++E +E+ SE+ A+A+GLIS+ T+RI KNLR+C +CH+ K +S +
Sbjct: 812 IEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCD 871
Query: 238 IIVRD 242
I++ D
Sbjct: 872 ILLED 876
Score = 101 (40.6 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 31/128 (24%), Positives = 65/128 (50%)
Query: 17 AALEVMDKLKNIGIFLD----SPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVI 72
AA+++M K++ GI D + I L++ M + L+ ++ GV PN T + +
Sbjct: 300 AAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 359
Query: 73 TACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDA 131
+AC C +++G + H +V + I+ L +VD+Y + K+ +AR+ +++ +
Sbjct: 360 SACSCLKVINQGSEVHSIAVKMGF-IDDVLVGN-SLVDMYSKCGKLEDARKVFDSVK-NK 416
Query: 132 SSVVWETL 139
W ++
Sbjct: 417 DVYTWNSM 424
Score = 65 (27.9 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 25/98 (25%), Positives = 42/98 (42%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
E K F DGV P+ F ++ C G V+ G + SV ++ L I
Sbjct: 164 EVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG-KVIHSVVIKLGMSSCLRVSNSI 222
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWET-LEKYAQ 144
+ +Y + ++ A +F R M+ + + W + L Y Q
Sbjct: 223 LAVYAKCGELDFATKFFRRMR-ERDVIAWNSVLLAYCQ 259
Score = 59 (25.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 29/118 (24%), Positives = 48/118 (40%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPN---WSTFVG 70
+++ A +V D +KN ++ + I K E R ++ +RPN W+T +
Sbjct: 402 KLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Query: 71 VITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQ 128
G G + FQ E +D + + I+ Y + K EA E R MQ
Sbjct: 462 GYIKNGDEGEAMDLFQRME---KDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Score = 53 (23.7 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 29/134 (21%), Positives = 54/134 (40%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFE-NDGV 61
+ + +LCR + A + +D L G + ++LL C+D + G+ G+
Sbjct: 50 DEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGL 109
Query: 62 RPNWSTFV-----GVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
FV + CGC + + + F+S+ R+ ++ T +G Y R +
Sbjct: 110 FTEPDVFVETKLLSMYAKCGC---IADARKVFDSM-RERNLF-TWSAMIGA---YSRENR 161
Query: 117 IAEAREFIRNMQID 130
E + R M D
Sbjct: 162 WREVAKLFRLMMKD 175
Score = 42 (19.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 20/91 (21%), Positives = 36/91 (39%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACG-CFGAVDEGFQHFESVTRDYDINPTLEHFLGIV 108
LE ++ + PN T + ++ AC GA H + R+ D +++ L
Sbjct: 509 LELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNAL--T 566
Query: 109 DLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
D Y + I +R M+ + W +L
Sbjct: 567 DTYAKSGDIEYSRTIFLGMETK-DIITWNSL 596
Score = 37 (18.1 bits), Expect = 7.6e-23, Sum P(3) = 7.6e-23
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDL 47
ALE+ K++ +S I+ LL C +L
Sbjct: 508 ALELFRKMQFSRFMPNSVTILSLLPACANL 537
>TAIR|locus:2053659 [details] [associations]
symbol:AT2G15690 "AT2G15690" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC006248 UniGene:At.59377
HOGENOM:HOG000237569 EMBL:AY037247 EMBL:BT005808 IPI:IPI00532516
PIR:B84532 RefSeq:NP_565377.1 UniGene:At.21775
ProteinModelPortal:Q9ZQE5 STRING:Q9ZQE5 PaxDb:Q9ZQE5 PRIDE:Q9ZQE5
EnsemblPlants:AT2G15690.1 GeneID:816062 KEGG:ath:AT2G15690
GeneFarm:3458 TAIR:At2g15690 eggNOG:NOG316395 InParanoid:Q94C14
OMA:GGQRPQY PhylomeDB:Q9ZQE5 ProtClustDB:CLSN2917127
Genevestigator:Q9ZQE5 Uniprot:Q9ZQE5
Length = 579
Score = 269 (99.8 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 78/246 (31%), Positives = 120/246 (48%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLK-LLEAGKRFE---ND-GVRPNWSTFVGVI 72
AL + +++ G+ + + + C + + EA F+ N+ G+ P ++GV+
Sbjct: 321 ALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVL 380
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDA- 131
G G + E Q+ RD PT + F + Y RL + +++ + +D
Sbjct: 381 GVLGKCGHLVEAEQYI----RDLPFEPTAD-FWEAMRNYARLHGDIDLEDYMEELMVDVD 435
Query: 132 -SSVVWETL-----EKYAQTXXXXXXXXXXXXXXXXNKKKDA-------G--YMPYTEYV 176
S V + + + +T K +A G Y+P T +V
Sbjct: 436 PSKAVINKIPTPPPKSFKETNMVTSKSRILEFRNLTFYKDEAKEMAAKKGVVYVPDTRFV 495
Query: 177 LRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENR 236
L D+DQEAKE+ Y SERLA+AYG+I TPP +TL I KNLR+CG+CHNFIK +S I R
Sbjct: 496 LHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGR 555
Query: 237 EIIVRD 242
+IVRD
Sbjct: 556 VLIVRD 561
>TAIR|locus:2102852 [details] [associations]
symbol:CRR2 "AT3G46790" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISS] [GO:0031425
"chloroplast RNA processing" evidence=IMP] [GO:0031426
"polycistronic mRNA processing" evidence=IMP] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=RCA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0030422 "production
of siRNA involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AL096859 GO:GO:0031425 Pfam:PF13041
HOGENOM:HOG000237570 EMBL:AK226825 IPI:IPI00546099 PIR:T12969
RefSeq:NP_190263.1 UniGene:At.3629 ProteinModelPortal:Q9STF3
SMR:Q9STF3 STRING:Q9STF3 PRIDE:Q9STF3 EnsemblPlants:AT3G46790.1
GeneID:823832 KEGG:ath:AT3G46790 GeneFarm:3440 TAIR:At3g46790
eggNOG:NOG277232 InParanoid:Q9STF3 OMA:WSAMIAC PhylomeDB:Q9STF3
ProtClustDB:CLSN2685130 Genevestigator:Q9STF3 GO:GO:0031426
Uniprot:Q9STF3
Length = 657
Score = 193 (73.0 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K+ GY+P T+ VL +L+ E KE+ SE+LA+A+GLI+T G +RI KNLR+C +CH
Sbjct: 562 KEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCH 621
Query: 225 NFIKKLSSIENREIIVRD 242
F K +S +EI+VRD
Sbjct: 622 LFTKFISKFMEKEILVRD 639
Score = 167 (63.8 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 47/161 (29%), Positives = 79/161 (49%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+G P TFV V+ AC G V+EG + FE++ RD+ I P +EH+ +VDL GR ++
Sbjct: 380 NGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLD 439
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTXXXXXXXXXXXXXXXXNKKKDAGYMPYTEYVL- 177
EA + +++M+ + VW +L + + K+AG YVL
Sbjct: 440 EAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAG-----NYVLL 494
Query: 178 RDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT-LRIKKNL 217
D+ EA+ + R ++L GL P GR + +++ +
Sbjct: 495 ADIYAEAQMWDEVKRVKKLLEHRGLQKLP-GRCWMEVRRKM 534
Score = 76 (31.8 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 24/79 (30%), Positives = 35/79 (44%)
Query: 63 PNWSTFVGVITACGCFGAVDEG-FQHFESVTRDYD-INPTLEHFLGIVDLYGRLQKIAEA 120
PN T V V+ AC A+++G H + R D I P + +V +YGR K+
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVIS---ALVTMYGRCGKLEVG 339
Query: 121 REFIRNMQIDASSVVWETL 139
+ M D V W +L
Sbjct: 340 QRVFDRMH-DRDVVSWNSL 357
Score = 56 (24.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 17/73 (23%), Positives = 33/73 (45%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR-FE----NDGVRPNWSTFVG 70
K A+++ +++ G + +L C L+E GKR FE + G++P +
Sbjct: 368 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC 427
Query: 71 VITACGCFGAVDE 83
++ G +DE
Sbjct: 428 MVDLLGRANRLDE 440
Score = 43 (20.2 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVC 44
N ++ LC+E ++K A+ V+ + + S ELL +C
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESS-----PSQQTYELLILC 86
>TAIR|locus:2167593 [details] [associations]
symbol:AT5G44230 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005239 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:DQ447037
IPI:IPI00540587 RefSeq:NP_199236.1 UniGene:At.55349
ProteinModelPortal:Q9FFG8 SMR:Q9FFG8 EnsemblPlants:AT5G44230.1
GeneID:834446 KEGG:ath:AT5G44230 GeneFarm:3182 TAIR:At5g44230
eggNOG:NOG302114 InParanoid:Q9FFG8 OMA:VISWTEL PhylomeDB:Q9FFG8
ProtClustDB:CLSN2687233 Genevestigator:Q9FFG8 Uniprot:Q9FFG8
Length = 657
Score = 166 (63.5 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
++PN TFVG + AC G VD+G Q F+S+ + + + PT +H+ +VDL GR ++ EA
Sbjct: 381 IKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEA 440
Query: 121 REFIRNMQIDASSVVWETL 139
E I+ M ++ VW L
Sbjct: 441 LELIKTMSVEPHGGVWGAL 459
Score = 136 (52.9 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY P V D+ AK +E+LA+A+ L++T T+ I KNLR+C +CH F+
Sbjct: 565 GYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFM 624
Query: 228 KKLSSIENREIIVRD 242
+ S + + II+RD
Sbjct: 625 RLASEVTGKVIIMRD 639
Score = 67 (28.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 20/80 (25%), Positives = 36/80 (45%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG--I 107
LE R E G+R + T G I+AC GA + + + + +P+ +G +
Sbjct: 266 LEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQ-IAQKSGYSPSDHVVIGSAL 324
Query: 108 VDLYGRLQKIAEAREFIRNM 127
+D+Y + + EA +M
Sbjct: 325 IDMYSKCGNVEEAVNVFMSM 344
Score = 51 (23.0 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 21/87 (24%), Positives = 41/87 (47%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG--IVDLYGRLQKIA 118
+ P TF ++ ACG ++ G Q F + T + + ++G ++D+Y + + I
Sbjct: 145 ITPVSFTFSALLKACGTMKDLNLGRQ-FHAQT--FRLRGFCFVYVGNTMIDMYVKCESID 201
Query: 119 EAREFIRNMQIDASSVVW-ETLEKYAQ 144
AR+ M + + W E + YA+
Sbjct: 202 CARKVFDEMP-ERDVISWTELIAAYAR 227
Score = 51 (23.0 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 24/105 (22%), Positives = 42/105 (40%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF----ENDGVRPNWSTFVG--V 71
ALE D+++ GI D + ++ C L + R + G P+ +G +
Sbjct: 265 ALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSAL 324
Query: 72 ITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
I G V+E F S+ ++ LG+ +GR Q+
Sbjct: 325 IDMYSKCGNVEEAVNVFMSMNNK-NVFTYSSMILGLAT-HGRAQE 367
Score = 40 (19.1 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 17/91 (18%), Positives = 36/91 (39%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
+I++ + C +++ EA F + + N T+ +I G E F + +
Sbjct: 324 LIDMYSKCGNVE--EAVNVFMSMNNK-NVFTYSSMILGLATHGRAQEALHLFHYMVTQTE 380
Query: 97 INPTLEHFLGIVDLYGRLQKIAEAREFIRNM 127
I P F+G + + + R+ +M
Sbjct: 381 IKPNTVTFVGALMACSHSGLVDQGRQVFDSM 411
>TAIR|locus:2177537 [details] [associations]
symbol:EMB3141 "AT5G50390" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AB012248 Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00532811
RefSeq:NP_199850.1 UniGene:At.65663 ProteinModelPortal:Q9FK33
SMR:Q9FK33 EnsemblPlants:AT5G50390.1 GeneID:835107
KEGG:ath:AT5G50390 GeneFarm:3443 TAIR:At5g50390 eggNOG:NOG255376
InParanoid:Q9FK33 OMA:PRAMHYA PhylomeDB:Q9FK33 ProtClustDB:PLN03081
Genevestigator:Q9FK33 Uniprot:Q9FK33
Length = 701
Score = 175 (66.7 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 31/75 (41%), Positives = 51/75 (68%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY +++L D+D++ +E+ Y SE+LA+AYGL++TP L+I +N RIC CH +
Sbjct: 609 GYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVV 668
Query: 228 KKLSSIENREIIVRD 242
+ +S + RE++VRD
Sbjct: 669 EFISLVTGREMVVRD 683
Score = 118 (46.6 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 29/92 (31%), Positives = 48/92 (52%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+A K FE V PN TF+ V++AC G ++G++ F S++ + I P H+ +
Sbjct: 409 DAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACM 468
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
++L GR + EA FIR + + +W L
Sbjct: 469 IELLGRDGLLDEAIAFIRRAPLKTTVNMWAAL 500
Score = 44 (20.5 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 67 TFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRN 126
TF ++ A G++ G Q + ++ T G++D+Y + I +AR
Sbjct: 226 TFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVS-CGLIDMYSKCGDIEDARCAFEC 284
Query: 127 MQIDASSVVWETL 139
M + ++V W +
Sbjct: 285 MP-EKTTVAWNNV 296
>TAIR|locus:2150936 [details] [associations]
symbol:AT5G15340 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 GO:GO:0005739
EMBL:CP002688 GenomeReviews:BA000015_GR PROSITE:PS51375
EMBL:AL353993 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00531606 PIR:T49969 RefSeq:NP_197038.1
UniGene:At.66725 ProteinModelPortal:Q9LXE8 SMR:Q9LXE8 PRIDE:Q9LXE8
EnsemblPlants:AT5G15340.1 GeneID:831386 KEGG:ath:AT5G15340
GeneFarm:3539 TAIR:At5g15340 eggNOG:NOG317118 InParanoid:Q9LXE8
OMA:SEKLAVC PhylomeDB:Q9LXE8 ProtClustDB:CLSN2687457
Genevestigator:Q9LXE8 Uniprot:Q9LXE8
Length = 623
Score = 165 (63.1 bits), Expect = 8.7e-22, Sum P(2) = 8.7e-22
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTY--RSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
+ AGY+P ++ + + +EK Q SE+LAV +GL+ T P L + KNLRIC +
Sbjct: 526 RSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRD 585
Query: 223 CHNFIKKLSSIENREIIVRDK 243
CH+ +K +S + +REII+RD+
Sbjct: 586 CHSAMKIVSKVYDREIIIRDR 606
Score = 137 (53.3 bits), Expect = 8.7e-22, Sum P(2) = 8.7e-22
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+P+ TF V++AC G VDEG++ F S+ R Y + P ++H+ +VDL GR I EA
Sbjct: 347 VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEA 405
Query: 121 REFIRNMQIDASSVVWETL 139
+R M + + VV +L
Sbjct: 406 EILMREMPVPPNEVVLGSL 424
Score = 49 (22.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 16/70 (22%), Positives = 31/70 (44%)
Query: 69 VGVITACG-CFGAVDEGF-QHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRN 126
V V+ G C D GF Q V + +++ ++D+YG+ ++E +
Sbjct: 112 VSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEE 171
Query: 127 MQIDASSVVW 136
++ + S V W
Sbjct: 172 LE-EKSVVSW 180
>TAIR|locus:2150690 [details] [associations]
symbol:EMB175 "AT5G03800" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP;NAS] [GO:0016020
"membrane" evidence=ISS] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL162873 EMBL:AB005235 GO:GO:0009793
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
EMBL:AY864345 EMBL:AY864346 EMBL:AK117204 IPI:IPI00535493
PIR:T48407 RefSeq:NP_196000.2 UniGene:At.63783
ProteinModelPortal:Q9FFN1 SMR:Q9FFN1 EnsemblPlants:AT5G03800.1
GeneID:831717 KEGG:ath:AT5G03800 GeneFarm:3198 TAIR:At5g03800
eggNOG:NOG285897 HOGENOM:HOG000242153 InParanoid:Q9FFN1 OMA:TEMITAY
PhylomeDB:Q9FFN1 ProtClustDB:CLSN2681629 Genevestigator:Q9FFN1
Uniprot:Q9FFN1
Length = 896
Score = 182 (69.1 bits), Expect = 2.5e-21, Sum P(3) = 2.5e-21
Identities = 33/78 (42%), Positives = 54/78 (69%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPP-GRTLRIKKNLRICGECHNF 226
GY P TEYVL+++D+ K+ + S +LAV YG++S+ G+ +R+ KN+ +CG+CH F
Sbjct: 803 GYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEF 862
Query: 227 IKKLSSIENREIIVRDKT 244
K +S + REI++RD +
Sbjct: 863 FKYISVVVKREIVLRDSS 880
Score = 71 (30.1 bits), Expect = 2.5e-21, Sum P(3) = 2.5e-21
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 88 FESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
F S+ YDI PT EH+ V + G + EA + I +M + V L
Sbjct: 647 FLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRAL 698
Score = 59 (25.8 bits), Expect = 4.4e-20, Sum P(3) = 4.4e-20
Identities = 25/80 (31%), Positives = 35/80 (43%)
Query: 67 TFVGVITACGCFGAVDEGFQHFESVTRDYDI--NPTLE------HFLGIVDLY-GRLQKI 117
TF +ITA FG VD + F +VT I N + H L + L+ LQ+
Sbjct: 353 TFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRG 412
Query: 118 AEAREFIRNMQIDASSVVWE 137
E +F +DA +V E
Sbjct: 413 VELTDFSLTSAVDACGLVSE 432
Score = 56 (24.8 bits), Expect = 2.5e-21, Sum P(3) = 2.5e-21
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 45 MDLKLLEAGKRFENDG-VRPNWSTFVGVITAC 75
++++ L+ R G V+PN TFV ++TAC
Sbjct: 160 LEIEALKVFFRMRKAGLVQPNEYTFVAILTAC 191
Score = 53 (23.7 bits), Expect = 5.2e-21, Sum P(3) = 5.2e-21
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNI-GIFLDSPDIIELLNVCMDLKLLEAGKRFENDGV 61
N+ + L +E + A ++ ++ + G +DS + LL+ C D +L G+ +
Sbjct: 253 NTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAI 312
Query: 62 R 62
R
Sbjct: 313 R 313
Score = 44 (20.5 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 14/70 (20%), Positives = 32/70 (45%)
Query: 71 VITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQI 129
++ CG G + G+Q H ++ Y + +L + L + +Y + +A + M+
Sbjct: 527 ILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSL--ISMYAKCCDSDDAIKIFNTMR- 583
Query: 130 DASSVVWETL 139
+ + W +L
Sbjct: 584 EHDVISWNSL 593
Score = 37 (18.1 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 30 IFLDSPDIIELLNVCMDLKLLEAG 53
+FLD + +L VC L E G
Sbjct: 517 LFLDEVSLTLILAVCGTLGFREMG 540
>TAIR|locus:2098901 [details] [associations]
symbol:AT3G61170 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL137898 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
UniGene:At.172 IPI:IPI00530191 PIR:T47909 RefSeq:NP_191676.1
UniGene:At.54031 ProteinModelPortal:Q9M2E7 SMR:Q9M2E7 PRIDE:Q9M2E7
EnsemblPlants:AT3G61170.1 GeneID:825289 KEGG:ath:AT3G61170
TAIR:At3g61170 InParanoid:Q9M2E7 OMA:NSMIVGC PhylomeDB:Q9M2E7
ProtClustDB:CLSN2685238 Genevestigator:Q9M2E7 Uniprot:Q9M2E7
Length = 783
Score = 181 (68.8 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 34/66 (51%), Positives = 45/66 (68%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K+AGY + L DLD+E KE Y SE+LAVA+GL+ P G +RI KNLR+CG+CH
Sbjct: 672 KEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCH 731
Query: 225 NFIKKL 230
+ +K L
Sbjct: 732 SAMKLL 737
Score = 102 (41.0 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 22/103 (21%), Positives = 52/103 (50%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
++ + C L+ +A F + +R + T+ +I G +++ ++F+S+ Y
Sbjct: 471 LVTMYTKCGSLE--DANVIFNSMEIR-DLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYG 527
Query: 97 INPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
I P EH+ ++DL+GR + + + M+++ + VW+ +
Sbjct: 528 ITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAI 570
Score = 94 (38.1 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 22/90 (24%), Positives = 48/90 (53%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
++DG++PN T V+ C + G Q H ++ +D++ + + G++ +Y + +
Sbjct: 117 QSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVN--GLLAMYAQCK 174
Query: 116 KIAEAREFIRNMQIDASSVVWET-LEKYAQ 144
+I+EA M+ + ++V W + L Y+Q
Sbjct: 175 RISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Score = 94 (38.1 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLG 106
K +E + +G + N TF V+TAC A G Q H V + N ++ L
Sbjct: 210 KAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSAL- 268
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+D+Y + +++ AR + M++D V W ++
Sbjct: 269 -IDMYAKCREMESARALLEGMEVD-DVVSWNSM 299
Score = 46 (21.3 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 13/70 (18%), Positives = 31/70 (44%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + C+ A + ++++ GI + + +L +C L LL G++ ++
Sbjct: 94 NALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIK 153
Query: 63 PNWSTFVGVI 72
+ V V+
Sbjct: 154 TGFDLDVNVV 163
Score = 40 (19.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGV 71
AL++ ++ GI D +L+ +L LLE G++ + ++ + + + V
Sbjct: 414 ALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSV 467
>TAIR|locus:2013738 [details] [associations]
symbol:AT1G29710 "AT1G29710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 PROSITE:PS51375
EMBL:AC068667 Pfam:PF01535 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569
ProtClustDB:CLSN2682015 EMBL:AC079288 IPI:IPI00537169 PIR:E86420
RefSeq:NP_174264.1 UniGene:At.40680 ProteinModelPortal:Q9C6G2
PaxDb:Q9C6G2 PRIDE:Q9C6G2 ProMEX:Q9C6G2 EnsemblPlants:AT1G29710.1
GeneID:839848 KEGG:ath:AT1G29710 GeneFarm:3459 TAIR:At1g29710
eggNOG:NOG250214 InParanoid:Q9C6G2 OMA:HECIIAL PhylomeDB:Q9C6G2
Genevestigator:Q9C6G2 Uniprot:Q9C6G2
Length = 475
Score = 145 (56.1 bits), Expect = 8.7e-21, Sum P(3) = 8.7e-21
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
RF+ +G +PN F V + C G V EG F+++ R+Y I P++EH+ + +
Sbjct: 210 RFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATS 269
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
+ EA F+ M ++ S VWETL
Sbjct: 270 GHLDEALNFVERMPMEPSVDVWETL 294
Score = 128 (50.1 bits), Expect = 8.7e-21, Sum P(3) = 8.7e-21
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQT--YRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
K+ GY+P T Y R L + K Q YR E +AV L+ + P + + N+RI G+
Sbjct: 380 KEMGYVPDTRYY-RSLIMAMENKEQIFGYREE-IAVVESLLKSKPRSAITLLTNIRIVGD 437
Query: 223 CHNFIKKLSSIENREIIVRD 242
CH+ +K +S I R++I RD
Sbjct: 438 CHDMMKLMSVITGRDMIKRD 457
Score = 63 (27.2 bits), Expect = 8.7e-21, Sum P(3) = 8.7e-21
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 9 LCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK 54
LC + + A+EV+D L+N G +D ++ L +C + LEA +
Sbjct: 94 LCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAAR 139
>TAIR|locus:2032955 [details] [associations]
symbol:AT1G25360 "AT1G25360" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC079374 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00533539 PIR:E86383 RefSeq:NP_173907.1
UniGene:At.41352 ProteinModelPortal:Q9FRI5 SMR:Q9FRI5
EnsemblPlants:AT1G25360.1 GeneID:839121 KEGG:ath:AT1G25360
GeneFarm:3520 TAIR:At1g25360 eggNOG:NOG253193 InParanoid:Q9FRI5
OMA:EPCDYAF PhylomeDB:Q9FRI5 ProtClustDB:CLSN2682612
Genevestigator:Q9FRI5 Uniprot:Q9FRI5
Length = 790
Score = 220 (82.5 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 61/221 (27%), Positives = 110/221 (49%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
+I+LL C K +A E+ +P + +++ C G ++ G + + +
Sbjct: 560 LIDLL--CRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKL---FG 614
Query: 97 INPTLEH---FLGIVDLY---GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTXXXX 149
+ P EH ++ + +++ G+ +++A R+ +R+ + + W +E T
Sbjct: 615 LIP--EHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVD 672
Query: 150 XXXXXXXXXXXX------NKKKDAGYMPYTEYVLRDLDQEA-KEKPQTYRSERLAVAYGL 202
+ + GY+P T +VL D++ + KE T SE++AVA+GL
Sbjct: 673 DTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGL 732
Query: 203 ISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
+ PPG T+RI KNLR CG+CHNF + LS + R+II+RD+
Sbjct: 733 MKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDR 773
Score = 142 (55.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+RP+ T + V+TAC G VD+G ++F+S+ Y I P +H+ ++DL R K ++
Sbjct: 513 GIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSD 572
Query: 120 AREFIRNMQIDASSVVWETL 139
A I ++ ++ +WE L
Sbjct: 573 AESVIESLPFKPTAEIWEAL 592
Score = 50 (22.7 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR 55
ALE++ ++ + GI LD ++ C LL+ GK+
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
>TAIR|locus:2127826 [details] [associations]
symbol:MEF8S "MEF8 similar" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 GO:GO:0005739
EMBL:CP002687 GenomeReviews:CT486007_GR PROSITE:PS51375
EMBL:AL161581 EMBL:AL034567 Pfam:PF01535 TIGRFAMs:TIGR00756
HOGENOM:HOG000237569 eggNOG:NOG235837 EMBL:BT015164 EMBL:AK175781
IPI:IPI00524403 PIR:T05355 RefSeq:NP_194971.1 UniGene:At.24424
UniGene:At.66647 ProteinModelPortal:Q9SUU7 SMR:Q9SUU7 IntAct:Q9SUU7
EnsemblPlants:AT4G32450.1 GeneID:829380 KEGG:ath:AT4G32450
GeneFarm:3456 TAIR:At4g32450 InParanoid:Q9SUU7 OMA:ISAYNSI
PhylomeDB:Q9SUU7 ProtClustDB:CLSN2916168 Genevestigator:Q9SUU7
Uniprot:Q9SUU7
Length = 537
Score = 170 (64.9 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
+ GY+P ++ L D+DQE+K++ +ER A + TP +R+ KNLR+C +CHN
Sbjct: 443 EIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHN 502
Query: 226 FIKKLSSIENREIIVRD 242
+K +S I RE+I RD
Sbjct: 503 ALKLMSKIVGRELISRD 519
Score = 159 (61.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 49/178 (27%), Positives = 83/178 (46%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
++ RF+ +G +P+ F + ACG G ++EG HFES+ ++Y I P +EH++ +V
Sbjct: 267 IDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVK 326
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTXXXXXXXXX------XXXXXXXNK 163
+ + EA F+ +M+ + +WETL ++ NK
Sbjct: 327 MLAEPGYLDEALRFVESMEPNVD--LWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNK 384
Query: 164 KKDAGYMPY--TEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIK-KNLR 218
+ AG +P ++ V L + AK P Y +A G IS P R L + K+L+
Sbjct: 385 ESKAGLVPVKSSDLVKEKLQRMAKG-PN-YGIRYMAA--GDISRPENRELYMALKSLK 438
Score = 95 (38.5 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 30/114 (26%), Positives = 54/114 (47%)
Query: 5 ELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK---RFENDGV 61
EL +CRE +VK A+E++ +N G +D P + + +C D + L+ K F V
Sbjct: 152 ELDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSV 211
Query: 62 R-PNWSTFVGVITA-CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+ S + +I GC G+V++ F S+ LE + G++ + +
Sbjct: 212 GISDISAYNSIIEMYSGC-GSVEDALTVFNSMPER-----NLETWCGVIRCFAK 259
Score = 53 (23.7 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 26/120 (21%), Positives = 50/120 (41%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVC-----MDLKLLEAGKRFENDGVRPNWSTFVGVI 72
A++ + K G D E+ C M+ LL ++ G+ P +V ++
Sbjct: 266 AIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLV 325
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDAS 132
G +DE + ES+ + D+ TL + + ++G L ++ + Q+DAS
Sbjct: 326 KMLAEPGYLDEALRFVESMEPNVDLWETL---MNLSRVHGDLILGDRCQDMVE--QLDAS 380
>TAIR|locus:2205425 [details] [associations]
symbol:AT1G68930 "AT1G68930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC011665 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
IPI:IPI00528975 PIR:H96713 RefSeq:NP_177059.1 UniGene:At.52442
ProteinModelPortal:Q9CAA8 SMR:Q9CAA8 EnsemblPlants:AT1G68930.1
GeneID:843226 KEGG:ath:AT1G68930 GeneFarm:3231 TAIR:At1g68930
eggNOG:NOG300864 HOGENOM:HOG000237570 InParanoid:Q9CAA8 OMA:EEGAQFH
PhylomeDB:Q9CAA8 ProtClustDB:CLSN2682344 Genevestigator:Q9CAA8
Uniprot:Q9CAA8
Length = 743
Score = 218 (81.8 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 62/198 (31%), Positives = 94/198 (47%)
Query: 53 GKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG-IVDLY 111
G F D + W+T +++AC G ++ G ES+ +P L I
Sbjct: 533 GMPFPPDAI--GWTT---LLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASK 587
Query: 112 GRLQKIAEAREFIRNMQIDA----SSVVWE-TLEKYAQTXXXX--XXXXXXXXXXXXNKK 164
G+ +A+ R +R + S + W+ L ++ NK
Sbjct: 588 GKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKI 647
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
D GY P T +V D+++ K K Y SERLA+A+GLI P G+ +R+ KNLR+C +CH
Sbjct: 648 IDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCH 707
Query: 225 NFIKKLSSIENREIIVRD 242
N K +SS+ REI+VRD
Sbjct: 708 NATKHISSVTGREILVRD 725
Score = 153 (58.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++P+ T GVI+AC G V++G ++F+ +T +Y I P++ H+ ++DL+ R ++ E
Sbjct: 467 GLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEE 526
Query: 120 AREFIRNMQIDASSVVWETL 139
A FI M ++ W TL
Sbjct: 527 AMRFINGMPFPPDAIGWTTL 546
Score = 48 (22.0 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 19 LEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF 56
+++ DK+ G+ D + +++ C L+E G+R+
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY 494
>TAIR|locus:2825364 [details] [associations]
symbol:AT1G71420 "AT1G71420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC016163 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK230400 IPI:IPI00539447
RefSeq:NP_177298.1 UniGene:At.51303 ProteinModelPortal:Q9C9H9
SMR:Q9C9H9 EnsemblPlants:AT1G71420.1 GeneID:843483
KEGG:ath:AT1G71420 GeneFarm:3464 TAIR:At1g71420 eggNOG:NOG242517
InParanoid:Q9C9H9 OMA:GSCRKHG PhylomeDB:Q9C9H9
ProtClustDB:CLSN2679244 Genevestigator:Q9C9H9 Uniprot:Q9C9H9
Length = 745
Score = 154 (59.3 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
F+ + P+ +TF+ +++AC G V+EG + F S+ + P L H+ ++D+ R +
Sbjct: 458 FQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAE 517
Query: 116 KIAEAREFIRNMQIDASSVVWETL 139
+ AEA E I+ M +D +VVW L
Sbjct: 518 RFAEAEEVIKQMPMDPDAVVWIAL 541
Score = 137 (53.3 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 165 KDAGYMPYTEYVLRDL-DQEAKEKPQTYRSERLAVAYGLI----STPPGRTL-RIKKNLR 218
K+ GY+P +D+ D+E +E + SE+LA+A+ ++ S+ G L +I KN R
Sbjct: 644 KEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTR 703
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
IC +CHNF+K S + +EI++RD
Sbjct: 704 ICIDCHNFMKLASKLLGKEILMRD 727
Score = 45 (20.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 55 RFENDGVRPNWSTFVGVITAC 75
+ + + P+W TF V+ AC
Sbjct: 359 QLRQEKLSPDWYTFSSVLKAC 379
Score = 44 (20.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 14/64 (21%), Positives = 27/64 (42%)
Query: 64 NWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREF 123
+W++ ++ A G VD F+ + DINP F+ ++ ++ E
Sbjct: 437 SWNS---MLKAYSLHGQVDSILPVFQKM----DINPDSATFIALLSACSHAGRVEEGLRI 489
Query: 124 IRNM 127
R+M
Sbjct: 490 FRSM 493
>TAIR|locus:2183886 [details] [associations]
symbol:RARE1 "REQUIRED FOR ACCD RNA EDITING 1"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009451 "RNA modification" evidence=IMP]
[GO:0016556 "mRNA modification" evidence=RCA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL163491
Pfam:PF01535 TIGRFAMs:TIGR00756 GO:GO:0009451 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00546730 PIR:T48574 RefSeq:NP_196831.1
UniGene:At.65509 ProteinModelPortal:Q9LYU9 SMR:Q9LYU9 PaxDb:Q9LYU9
PRIDE:Q9LYU9 EnsemblPlants:AT5G13270.1 GeneID:831168
KEGG:ath:AT5G13270 GeneFarm:3538 TAIR:At5g13270 eggNOG:NOG273627
InParanoid:Q9LYU9 OMA:PDAMSWK PhylomeDB:Q9LYU9
ProtClustDB:CLSN2687008 Genevestigator:Q9LYU9 Uniprot:Q9LYU9
Length = 752
Score = 161 (61.7 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 40/141 (28%), Positives = 71/141 (50%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA + FE + G++PN TF+ V+TAC G V++G +++ R Y++ PT++H+ +
Sbjct: 471 EALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCM 530
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTXXXXXXXXXXXXXXXXNKKKD- 166
+D+Y R + EA +F++NM + ++ W+ T +D
Sbjct: 531 IDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDT 590
Query: 167 AGY-MPYTEYVLRDLDQEAKE 186
AGY +P+ Y +EA E
Sbjct: 591 AGYVLPFNLYTWAGKWEEAAE 611
Score = 124 (48.7 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 193 SERLAVAYGLISTPPGRTLRIK--KNLRICGECHNFIKKLSSIENREIIVRD 242
SERLA+A+GLIS IK KNLR C +CH F K +S + EI++RD
Sbjct: 683 SERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRD 734
Score = 51 (23.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK 54
AL + +K+ + G+ +S I +L C L+E GK
Sbjct: 472 ALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK 508
Score = 45 (20.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 18/90 (20%), Positives = 36/90 (40%)
Query: 10 CREREVKAALEVMDKL--KNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNW-- 65
C+ + + A++ L KN I L+S + C L G + D ++ +
Sbjct: 362 CQMSQFEEAVKTFKSLRSKNASI-LNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 66 -----STFVGVITACGCFGAVDEGFQHFES 90
S + + + CGC +E F+ ++
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDN 450
Score = 42 (19.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 27/120 (22%), Positives = 50/120 (41%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGC 77
AL++ L G+ DS +L C L+ L GK+ + + V V T
Sbjct: 269 ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVD 328
Query: 78 FGAVDEGFQHFESVTRDY-DIN-PTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVV 135
F F ES R + +I P + I+ Y ++ + EA + ++++ +S++
Sbjct: 329 FYIKCSSF---ESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASIL 385
>TAIR|locus:2205200 [details] [associations]
symbol:OTP82 "AT1G08070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] [GO:0031425 "chloroplast RNA
processing" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC026875
GO:GO:0031425 Pfam:PF12854 Pfam:PF13041 eggNOG:KOG4197
HOGENOM:HOG000237569 IPI:IPI00516672 RefSeq:NP_172286.1
UniGene:At.43030 ProteinModelPortal:Q9LN01 SMR:Q9LN01
EnsemblPlants:AT1G08070.1 GeneID:837325 KEGG:ath:AT1G08070
GeneFarm:3172 TAIR:At1g08070 InParanoid:Q9LN01 OMA:EEWKEGA
PhylomeDB:Q9LN01 ProtClustDB:CLSN2682772 Genevestigator:Q9LN01
Uniprot:Q9LN01
Length = 741
Score = 206 (77.6 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 62/196 (31%), Positives = 96/196 (48%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG-IVDLYGRLQKIAE 119
+ P+ + ++ AC G V+ G E++ + NP L I GR ++A+
Sbjct: 534 MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAK 593
Query: 120 AREFI--RNMQ-------IDASSVVWETL--EKYAQTXXXXXXXXXXXXXXXXNKKKDAG 168
R + + M+ I+ SVV E + +K+ + AG
Sbjct: 594 TRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL----EKAG 649
Query: 169 YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIK 228
++P T VL+++++E KE + SE+LA+A+GLIST PG L I KNLR+C CH K
Sbjct: 650 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 709
Query: 229 KLSSIENREIIVRDKT 244
+S I REII RD+T
Sbjct: 710 LISKIYKREIIARDRT 725
Score = 160 (61.4 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 32/87 (36%), Positives = 51/87 (58%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
R G++P+ TFVG+++AC G +D G F ++T+DY + P LEH+ ++DL G
Sbjct: 460 RMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHS 519
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEK 141
EA E I M+++ V+W +L K
Sbjct: 520 GLFKEAEEMINMMEMEPDGVIWCSLLK 546
Score = 52 (23.4 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 17 AALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK 54
A+ ++ +++ IGI D + LL+ C +L+ G+
Sbjct: 453 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Score = 40 (19.1 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 8/40 (20%), Positives = 19/40 (47%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR 55
K ALE+ + + D ++ +++ C +E G++
Sbjct: 248 KEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
>TAIR|locus:2129361 [details] [associations]
symbol:AT4G14050 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IDA] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 EMBL:Z97335 PROSITE:PS51375
EMBL:AL161537 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 EMBL:BX840233 IPI:IPI00528310 PIR:B85153
PIR:F71401 RefSeq:NP_193141.2 UniGene:At.49691
ProteinModelPortal:O23266 SMR:O23266 PRIDE:O23266
EnsemblPlants:AT4G14050.1 GeneID:827041 KEGG:ath:AT4G14050
GeneFarm:3176 TAIR:At4g14050 eggNOG:NOG258429 OMA:YSKCSDI
PhylomeDB:O23266 ProtClustDB:CLSN2690293 Genevestigator:O23266
Uniprot:O23266
Length = 612
Score = 231 (86.4 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 64/193 (33%), Positives = 99/193 (51%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ---KIAE 119
P+ T+ +++AC G G + + + + + + L + ++Y K++E
Sbjct: 405 PDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYIL-LSNIYASASLWGKVSE 463
Query: 120 AREFIRNMQI--DA--SSVVW--ETLEKYA-QTXXXXXXXXXXXXXXXXNKKKDA-GYMP 171
AR + M++ D SSV ET YA +T + + GY+P
Sbjct: 464 ARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVP 523
Query: 172 YTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLS 231
T ++L D+D++ KEK + SER AVAYGL+ PG +RI KNLR+CG+CH +K +S
Sbjct: 524 DTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHIS 583
Query: 232 SIENREIIVRDKT 244
I REIIVRD T
Sbjct: 584 EITEREIIVRDAT 596
Score = 169 (64.5 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 39/126 (30%), Positives = 65/126 (51%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
+V AA ++ ++++ + + I+ + K L + GV+PN TFVG+I
Sbjct: 288 DVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIY 347
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
AC G V++G + F+S+T+DY I P+L+H+ ++DL GR + EA I M
Sbjct: 348 ACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDE 407
Query: 134 VVWETL 139
W L
Sbjct: 408 PTWAAL 413
>TAIR|locus:2115130 [details] [associations]
symbol:AT4G37170 "AT4G37170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:Z99707 EMBL:AL161590 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 HOGENOM:HOG000237570 IPI:IPI00546419 PIR:B85439
RefSeq:NP_195434.1 UniGene:At.65464 ProteinModelPortal:O23169
SMR:O23169 PRIDE:O23169 EnsemblPlants:AT4G37170.1 GeneID:829871
KEGG:ath:AT4G37170 GeneFarm:3146 TAIR:At4g37170 eggNOG:NOG313360
InParanoid:O23169 OMA:QNGQPDE PhylomeDB:O23169
ProtClustDB:CLSN2685770 Genevestigator:O23169 Uniprot:O23169
Length = 691
Score = 211 (79.3 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 55/194 (28%), Positives = 93/194 (47%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
++P+ + V+ C +G +D + + + + NP ++ + ++Y K E
Sbjct: 484 MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVT--YVTMANIYAAAGKWEEE 541
Query: 121 REFIRNMQ-IDASS---VVWETLEKY------AQTXXXXXXXXXXXXXXXXNKKKDAGYM 170
+ + MQ I + W +++ A T K K+ GY+
Sbjct: 542 GKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYV 601
Query: 171 PYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKL 230
P T VL D++ E KE+ Y SE+LAVA+ ++ST G +++ KNLR C +CH IK +
Sbjct: 602 PATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFI 661
Query: 231 SSIENREIIVRDKT 244
S+I R+I VRD T
Sbjct: 662 SNITKRKITVRDST 675
Score = 131 (51.2 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA K F+ G +P+ TFV V++AC G V++G + F S+T + ++ T +H+ +
Sbjct: 403 EALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCL 462
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
VDL R + + + I M + S +W ++
Sbjct: 463 VDLLARSGRFEQLKSVISEMPMKPSKFLWASV 494
Score = 43 (20.2 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 40 LLNVCMDLKLLEAGKRFENDGVRPNW-------STFVGVITACG 76
+LN C DL E GK+ R + S+ V + T CG
Sbjct: 325 VLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCG 368
>TAIR|locus:2079187 [details] [associations]
symbol:AT3G47530 "AT3G47530" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 EMBL:AL132955
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK221462 IPI:IPI00528158 PIR:T45713 RefSeq:NP_190337.1
UniGene:At.49647 ProteinModelPortal:Q9SN85 SMR:Q9SN85 PaxDb:Q9SN85
PRIDE:Q9SN85 EnsemblPlants:AT3G47530.1 GeneID:823907
KEGG:ath:AT3G47530 GeneFarm:3522 TAIR:At3g47530 eggNOG:NOG247657
InParanoid:Q9SN85 OMA:DSTIWRT PhylomeDB:Q9SN85
ProtClustDB:CLSN2685176 Genevestigator:Q9SN85 Uniprot:Q9SN85
Length = 591
Score = 193 (73.0 bits), Expect = 8.4e-18, Sum P(2) = 8.4e-18
Identities = 56/191 (29%), Positives = 93/191 (48%)
Query: 65 WSTFVGVITACGCFGAVDEG---FQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
W T +G AC G V+ G H + + + L L G+ +K+ E R
Sbjct: 390 WRTLLG---ACRVHGDVELGERVISHLIELKAEEAGDYVL--LLNTYSTVGKWEKVTELR 444
Query: 122 EFIRNMQIDA----SSVVWE-TLEKY-AQTXXXXXXXXXXXXXXXXNKK-KDAGYMPYTE 174
++ +I S++ + T+ ++ N++ K AGY+
Sbjct: 445 SLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEIT 504
Query: 175 YVLRDLD-QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSI 233
L +L+ +E K Y SE+LA+A+G++ TPPG T+R+ KNLR C +CHNF K +S +
Sbjct: 505 SELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDV 564
Query: 234 ENREIIVRDKT 244
+R +IVRD++
Sbjct: 565 YDRIVIVRDRS 575
Score = 143 (55.4 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 29/91 (31%), Positives = 49/91 (53%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESV-TRDYDINPTLEHFLGIV 108
+EA G+ P T G+++AC G V EG F+ + + ++ I P L H+ +V
Sbjct: 303 IEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVV 362
Query: 109 DLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
DL GR + + +A I++M++ S +W TL
Sbjct: 363 DLLGRARLLDKAYSLIKSMEMKPDSTIWRTL 393
Score = 56 (24.8 bits), Expect = 8.4e-18, Sum P(2) = 8.4e-18
Identities = 24/88 (27%), Positives = 41/88 (46%)
Query: 11 REREVKAALEVMDKLKNIGIFLDSPDIIELL---NVCMDLKLLEAGKR----FENDGVRP 63
R + + L + DK+KN PD + L C +L L+ GK+ + +G+
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSG 250
Query: 64 --NWS-TFVGVITACGCFGAVDEGFQHF 88
N S T V + + CG ++D+ +Q F
Sbjct: 251 ALNLSNTLVSMYSRCG---SMDKAYQVF 275
>TAIR|locus:2118964 [details] [associations]
symbol:EMB2758 "embryo defective 2758" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL031032 EMBL:AL161584 Pfam:PF01535 TIGRFAMs:TIGR00756
HOGENOM:HOG000237570 IPI:IPI00530295 PIR:T05227 RefSeq:NP_567948.1
UniGene:At.65452 ProteinModelPortal:O81767 SMR:O81767 PaxDb:O81767
PRIDE:O81767 EnsemblPlants:AT4G33990.1 GeneID:829546
KEGG:ath:AT4G33990 GeneFarm:3205 TAIR:At4g33990 eggNOG:NOG269748
InParanoid:O81767 OMA:GWSSMEV PhylomeDB:O81767
ProtClustDB:CLSN2917663 Genevestigator:O81767 Uniprot:O81767
Length = 823
Score = 208 (78.3 bits), Expect = 8.6e-18, Sum P(2) = 8.6e-18
Identities = 61/206 (29%), Positives = 102/206 (49%)
Query: 50 LEAGKRF-ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPT-LEHFLGI 107
LE +F ++ ++P+ S + +++AC G VD G E + +++ P + + + +
Sbjct: 604 LETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHL---FEVEPEHVGYHVLL 660
Query: 108 VDLY---GRLQKIAEAREFIRNMQIDASSVVWETLEK-------YAQTXXXXXXXXXXXX 157
++Y G+ + + E R + + W ++E Y
Sbjct: 661 SNMYASAGKWEGVDEIRSIAHGKGL-RKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRE 719
Query: 158 XXXXNKK-KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKN 216
K K GY+P +VL+D++ + KE SERLA+A+ LI+TP T+RI KN
Sbjct: 720 LTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKN 779
Query: 217 LRICGECHNFIKKLSSIENREIIVRD 242
LR+CG+CH+ K +S I REIIVRD
Sbjct: 780 LRVCGDCHSVTKFISKITEREIIVRD 805
Score = 172 (65.6 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 33/86 (38%), Positives = 54/86 (62%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K ++GV+P+ TFV +++AC G VDEG FE + DY I P+L+H+ +VD+YGR
Sbjct: 541 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGR 600
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
++ A +FI++M + + +W L
Sbjct: 601 AGQLETALKFIKSMSLQPDASIWGAL 626
Score = 45 (20.9 bits), Expect = 8.6e-18, Sum P(2) = 8.6e-18
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMD 46
N+ + C+ K AL + + L+ +DS ++ LL+ C +
Sbjct: 220 NAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTE 259
>TAIR|locus:2010652 [details] [associations]
symbol:AT1G04840 "AT1G04840" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC004809 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00518058 PIR:F86181 RefSeq:NP_171976.1
UniGene:At.51482 ProteinModelPortal:Q9MAT2 SMR:Q9MAT2
EnsemblPlants:AT1G04840.1 GeneID:839402 KEGG:ath:AT1G04840
GeneFarm:3457 TAIR:At1g04840 eggNOG:NOG254388 InParanoid:Q9MAT2
OMA:GDCHSLM PhylomeDB:Q9MAT2 ProtClustDB:CLSN2681950
Genevestigator:Q9MAT2 Uniprot:Q9MAT2
Length = 665
Score = 225 (84.3 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 61/208 (29%), Positives = 102/208 (49%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDY-DINPTL-EHFL 105
KL EA + EN + P+ +T+ + AC +G++ ESV+++ +++P L ++
Sbjct: 445 KLNEAHELVENMPINPDLTTWAALYRAC----KAHKGYRRAESVSQNLLELDPELCGSYI 500
Query: 106 GIVDLY---GRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTXXXXXXXXXXXXXXXXN 162
+ + G +Q + E R +I S+ W +E Q
Sbjct: 501 FLDKTHASKGNIQDV-EKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIG 559
Query: 163 KKKDA--------GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIK 214
K D GY P ++ + D+++E KE SE+LA+ G + T PG T+RI
Sbjct: 560 LKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRII 619
Query: 215 KNLRICGECHNFIKKLSSIENREIIVRD 242
KNLRICG+CH+ +K +S I R+I++RD
Sbjct: 620 KNLRICGDCHSLMKYVSKISQRDILLRD 647
Score = 164 (62.8 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 33/80 (41%), Positives = 46/80 (57%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G +P+ F+ V+TAC VD G F+S+ DY I PTL+H++ +VDL GR K+ E
Sbjct: 389 GEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNE 448
Query: 120 AREFIRNMQIDASSVVWETL 139
A E + NM I+ W L
Sbjct: 449 AHELVENMPINPDLTTWAAL 468
>TAIR|locus:2151501 [details] [associations]
symbol:AT5G46460 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB019223 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00533243 RefSeq:NP_199458.1
UniGene:At.29955 ProteinModelPortal:Q9FHF9 SMR:Q9FHF9
EnsemblPlants:AT5G46460.1 GeneID:834689 KEGG:ath:AT5G46460
GeneFarm:3435 TAIR:At5g46460 eggNOG:NOG266955 InParanoid:Q9FHF9
OMA:DEQKEEM PhylomeDB:Q9FHF9 ProtClustDB:CLSN2686182
Genevestigator:Q9FHF9 Uniprot:Q9FHF9
Length = 697
Score = 224 (83.9 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 63/214 (29%), Positives = 107/214 (50%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
++++L C LK EA + E V+PN ++ +++AC VD G + ++ + D
Sbjct: 470 MVDILGRCGKLK--EAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIF-NLD 526
Query: 97 INPTLEHFLGIVDLY---GRLQKIAEAR-EFIRN--MQIDASS--VVWETLEKYAQTXXX 148
+ + L + ++Y GR +++ R + +N M+ SS V+ ++
Sbjct: 527 SKSSAAYVL-LSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQP 585
Query: 149 XXXXXXXXXXXXXNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPG 208
K K+ GY P L D++ E KE+ Y SERLA+A+GLI+T G
Sbjct: 586 HCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEG 645
Query: 209 RTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+ + KNLR+C +CH IK +S + REI++RD
Sbjct: 646 SAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRD 679
>TAIR|locus:4010713776 [details] [associations]
symbol:AT3G26782 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB016889 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK228506 IPI:IPI00852362
RefSeq:NP_001078212.1 UniGene:At.71198 ProteinModelPortal:Q9LW32
SMR:Q9LW32 EnsemblPlants:AT3G26782.1 GeneID:5008030
KEGG:ath:AT3G26782 GeneFarm:3356 TAIR:At3g26782 eggNOG:NOG324646
OMA:TSIIDMY PhylomeDB:Q9LW32 ProtClustDB:CLSN2696675
Genevestigator:Q9LW32 Uniprot:Q9LW32
Length = 659
Score = 209 (78.6 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 39/82 (47%), Positives = 57/82 (69%)
Query: 162 NKKK-DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRIC 220
N+K +AGY+ T V D+D+E KE SE+LA+A+G+++T PG T+ + KNLR+C
Sbjct: 560 NRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVC 619
Query: 221 GECHNFIKKLSSIENREIIVRD 242
+CHN IK +S I +RE +VRD
Sbjct: 620 SDCHNVIKLISKIVDREFVVRD 641
Score = 172 (65.6 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 56/219 (25%), Positives = 95/219 (43%)
Query: 10 CREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFV 69
C+ V+ A + D++KN + + I K LE + GVRPN+ TFV
Sbjct: 333 CKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392
Query: 70 GVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQI 129
V+ AC G EG++ F ++ + + P LEH+ +VDL GR + +A + I+ M++
Sbjct: 393 SVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKM 452
Query: 130 DASSVVWETLEKYAQTXXXXXXXXXXXXXXXXNKKKDAGYMPYTEYVLRDLDQ-EAKEKP 188
S++W +L + + GY ++ D + + E+
Sbjct: 453 KPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERV 512
Query: 189 QTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
+ R GL+ PPG +L L + GE H F+
Sbjct: 513 RMIMKNR-----GLVK-PPGFSL-----LELNGEVHVFL 540
Score = 36 (17.7 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 30 IFLDSPDIIELLNVC 44
+FLDS ++ +++ C
Sbjct: 179 MFLDSMGLVSVISAC 193
>TAIR|locus:2149664 [details] [associations]
symbol:MEF1 "mitochondrial RNA editing factor 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0016554 "cytidine to uridine editing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016554 Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AB025606 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00534535
RefSeq:NP_200075.1 UniGene:At.55507 ProteinModelPortal:Q9LTF4
SMR:Q9LTF4 STRING:Q9LTF4 EnsemblPlants:AT5G52630.1 GeneID:835340
KEGG:ath:AT5G52630 GeneFarm:3327 TAIR:At5g52630 eggNOG:NOG282491
InParanoid:Q9LTF4 OMA:NLGIWNA ProtClustDB:CLSN2686108
Genevestigator:Q9LTF4 Uniprot:Q9LTF4
Length = 588
Score = 218 (81.8 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 62/206 (30%), Positives = 103/206 (50%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF-LG 106
+L EA + N + P S + ++T+C + F + + +++ P +
Sbjct: 368 RLQEALEVITNMPIDPTESVWGALLTSCTVHKNTE--LAAF-AADKVFELGPVSSGMHIS 424
Query: 107 IVDLY---GRLQKIAEAREFIRNM-QIDASSVVW-ETLEK---YA--QTXXXXXXXXXXX 156
+ + Y GR + A+AR+ +R+ + + + W E K +A +
Sbjct: 425 LSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEK 484
Query: 157 XXXXXNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKN 216
+ + AGY+ T YVLR++D + K + Y SERLA+A+GLI+ P R +R+ KN
Sbjct: 485 LAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKN 544
Query: 217 LRICGECHNFIKKLSSIENREIIVRD 242
LR+CG+CHN IK +S R IIVRD
Sbjct: 545 LRVCGDCHNAIKFMSVCTRRVIIVRD 570
Score = 184 (69.8 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 37/92 (40%), Positives = 57/92 (61%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K++E KR + G++PN+ TF+ V+ AC G VDEG +F+ + ++ I PT +H+ +
Sbjct: 301 KVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASL 359
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
VD+ GR ++ EA E I NM ID + VW L
Sbjct: 360 VDMLGRAGRLQEALEVITNMPIDPTESVWGAL 391
>TAIR|locus:2082886 [details] [associations]
symbol:EMB2261 "embryo defective 2261" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP;NAS] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132956
GO:GO:0009793 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AY864347
EMBL:AY864348 IPI:IPI00540837 PIR:T45822 RefSeq:NP_190486.2
UniGene:At.35640 ProteinModelPortal:Q5G1T1 SMR:Q5G1T1 PRIDE:Q5G1T1
EnsemblPlants:AT3G49170.1 GeneID:824078 KEGG:ath:AT3G49170
GeneFarm:3524 TAIR:At3g49170 eggNOG:NOG255947 InParanoid:Q5G1T1
OMA:CALIDMF PhylomeDB:Q5G1T1 ProtClustDB:CLSN2918315
Genevestigator:Q5G1T1 Uniprot:Q5G1T1
Length = 850
Score = 199 (75.1 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 57/192 (29%), Positives = 94/192 (48%)
Query: 65 WSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFI 124
W TF+G AC + G + + D N ++ + ++Y K E+ E
Sbjct: 646 WRTFLG---ACRVHSNTELGKLAARKIL-ELDPNEPAA-YIQLSNIYACAGKWEESTEMR 700
Query: 125 RNMQ----IDASSVVW----ETLEKY--AQTXXXXXXXXXXXXXXXXNKKKDAGYMPYTE 174
R M+ + W + + K+ T + K GY+P T+
Sbjct: 701 RKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTD 760
Query: 175 YVLRDLDQE---AKEKPQTYR-SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKL 230
VL L++E A+++ Y+ SE++AVA+GLIST R +R+ KNLR+CG+CHN +K +
Sbjct: 761 LVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYI 820
Query: 231 SSIENREIIVRD 242
S++ REI++RD
Sbjct: 821 STVSGREIVLRD 832
Score = 186 (70.5 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 35/92 (38%), Positives = 55/92 (59%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
+++LE + +GV+PN T+V +++AC G V EG++HF S+ D+ I P +EH+
Sbjct: 557 IRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC 616
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWET 138
+VDL R + +A EFI M A +VW T
Sbjct: 617 MVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648
Score = 40 (19.1 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 8/16 (50%), Positives = 8/16 (50%)
Query: 61 VRPNWSTFVGVITACG 76
V PN TF ACG
Sbjct: 369 VEPNHFTFSSAFKACG 384
>TAIR|locus:2019105 [details] [associations]
symbol:AT1G74400 "AT1G74400" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC011765 Pfam:PF01535 TIGRFAMs:TIGR00756 IPI:IPI00531357
PIR:G96772 RefSeq:NP_177580.1 UniGene:At.52512
ProteinModelPortal:Q9CA73 SMR:Q9CA73 EnsemblPlants:AT1G74400.1
GeneID:843781 KEGG:ath:AT1G74400 GeneFarm:3627 TAIR:At1g74400
eggNOG:NOG301508 InParanoid:Q9CA73 OMA:KDAHEFI PhylomeDB:Q9CA73
ProtClustDB:CLSN2914564 Genevestigator:Q9CA73 Uniprot:Q9CA73
Length = 462
Score = 177 (67.4 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+ PN TF+GV+ AC G V+EG +HF+S+ DY++ P HF +VDL+ R + +A
Sbjct: 272 ITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDA 331
Query: 121 REFIRNMQIDASSVVWETL 139
EFI M I ++V+W TL
Sbjct: 332 HEFINQMPIKPNTVIWRTL 350
Score = 46 (21.3 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 12 EREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
E V+A +E+ +++ I LD + L+ C DL ++ G+ + ++
Sbjct: 146 ENSVEA-IELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIK 195
>TAIR|locus:2122551 [details] [associations]
symbol:AT4G39530 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL161595 EMBL:AL078620
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00521091 PIR:T09369 RefSeq:NP_195663.1 UniGene:At.65474
ProteinModelPortal:Q9SVA5 SMR:Q9SVA5 PRIDE:Q9SVA5
EnsemblPlants:AT4G39530.1 GeneID:830107 KEGG:ath:AT4G39530
GeneFarm:4025 TAIR:At4g39530 eggNOG:NOG291774 InParanoid:Q9SVA5
OMA:VHAYTIK PhylomeDB:Q9SVA5 ProtClustDB:CLSN2685697
Genevestigator:Q9SVA5 Uniprot:Q9SVA5
Length = 834
Score = 189 (71.6 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 51/175 (29%), Positives = 86/175 (49%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L+ ++ ++G+ PN+ TFVGV++AC G V++G + FE + R + I P EH++ +
Sbjct: 639 KALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCM 697
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTXXXXXXXXXXXXXXXXNKKKDA 167
V L GR ++ +ARE I M +++VW +L + KD+
Sbjct: 698 VSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDS 757
Query: 168 GYMPYTE--YVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT-LRIKKNLRI 219
G Y + + EAK+ ER+ V G++ P GR+ + I K + I
Sbjct: 758 GSFTMLSNIYASKGMWTEAKKV-----RERMKVE-GVVKEP-GRSWIGINKEVHI 805
Score = 39 (18.8 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR 55
+L++ +L + D + +L+ C L LE GK+
Sbjct: 233 SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQ 270
Score = 38 (18.4 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPN 64
K A+E+ + G+ D +L C L L G + ++ N
Sbjct: 332 KEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKAN 380
>TAIR|locus:2198811 [details] [associations]
symbol:MEF3 "AT1G06140" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0080156 "mitochondrial mRNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
Gene3D:1.25.40.10 EMBL:AC024174 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 GO:GO:0080156 HOGENOM:HOG000237569
IPI:IPI00535707 PIR:G86196 RefSeq:NP_172104.1 UniGene:At.51500
ProteinModelPortal:Q9LND4 SMR:Q9LND4 PaxDb:Q9LND4 PRIDE:Q9LND4
EnsemblPlants:AT1G06140.1 GeneID:837123 KEGG:ath:AT1G06140
GeneFarm:3612 TAIR:At1g06140 eggNOG:NOG307299 InParanoid:Q9LND4
OMA:VHGYMIR PhylomeDB:Q9LND4 ProtClustDB:CLSN2682285
Genevestigator:Q9LND4 Uniprot:Q9LND4
Length = 558
Score = 183 (69.5 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 37/90 (41%), Positives = 54/90 (60%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+ + ++ V PN TFV +++AC G V EG++ FES+TRDY + P EH+ +VD
Sbjct: 398 LDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVD 457
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
L GR +I EA+ FI NM + + W L
Sbjct: 458 LLGRAGEIGEAKSFIDNMPVKPMASAWGAL 487
Score = 39 (18.8 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 32 LDSPDIIELLNVCMDLKLLEAG 53
+DS +++ + C+ L LLE G
Sbjct: 107 VDSFNLVFAIKACVGLGLLENG 128
>TAIR|locus:2019130 [details] [associations]
symbol:OTP87 "organelle transcript processing 87"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0080156 "mitochondrial mRNA modification" evidence=IMP]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009507
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011765 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00548519 PIR:B96775
RefSeq:NP_177599.1 UniGene:At.34861 ProteinModelPortal:Q9CA56
SMR:Q9CA56 PRIDE:Q9CA56 EnsemblPlants:AT1G74600.1 GeneID:843800
KEGG:ath:AT1G74600 GeneFarm:3629 TAIR:At1g74600 eggNOG:NOG278390
HOGENOM:HOG000243138 InParanoid:Q9CA56 OMA:SYAQHGK PhylomeDB:Q9CA56
ProtClustDB:CLSN2682261 ArrayExpress:Q9CA56 Genevestigator:Q9CA56
GO:GO:0080156 Uniprot:Q9CA56
Length = 895
Score = 180 (68.4 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+ + G +P+ TFVGV++AC G V+E + H S+ +DY I P H++ +VD
Sbjct: 738 LQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVD 797
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
GR ++ EA FI NM I ++VW TL
Sbjct: 798 ALGRSGRLREAESFINNMHIKPDALVWGTL 827
Score = 42 (19.8 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 5/34 (14%), Positives = 21/34 (61%)
Query: 11 REREVKAALEVMDKLKNIGIFLDSPDIIELLNVC 44
+ + +ALE+ ++++ G+ +++ + +++ C
Sbjct: 328 KSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
>TAIR|locus:2083631 [details] [associations]
symbol:AT3G15130 "AT3G15130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AP001299
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00524662
RefSeq:NP_188131.1 UniGene:At.65091 ProteinModelPortal:P0C898
SMR:P0C898 EnsemblPlants:AT3G15130.1 GeneID:820744
KEGG:ath:AT3G15130 GeneFarm:3534 TAIR:At3g15130 eggNOG:NOG277199
OMA:KEVHFFY PhylomeDB:P0C898 ProtClustDB:CLSN2685096
Genevestigator:P0C898 Uniprot:P0C898
Length = 689
Score = 168 (64.2 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 57/221 (25%), Positives = 103/221 (46%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
+++LL LK EA + ++PN + +++ C G ++ G + + + R
Sbjct: 456 VVDLLGRAGRLK--EAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDA 513
Query: 97 INPTLEHFLGIVDLYGRL---QKIAEAREF--IRNMQIDASSVVWETLEKYAQTXXXXXX 151
NP +++ + +LYG+ + ARE I+ ++ +A + W +E+
Sbjct: 514 KNPA--NYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAG-MSWVEIEREVHFFRSGED 570
Query: 152 XXXXXXXXXXNKKK-------DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIS 204
K+ + GY+ ++ L D+D E+KE+ SE+LA+ L +
Sbjct: 571 SHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALAT 630
Query: 205 ---TPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
G+T+R+ KNLR+C +CH FIK LS I +VRD
Sbjct: 631 GGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRD 671
Score = 134 (52.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+ P+ ++ V++AC G + EG + F + + I P +EH+ +VDL GR ++ EA
Sbjct: 410 IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEA 469
Query: 121 REFIRNMQIDASSVVWETL 139
+ I M I + +W+TL
Sbjct: 470 KHLIDTMPIKPNVGIWQTL 488
Score = 50 (22.7 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 11 REREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFE 57
+E E A+ + +L+ + +DS + ++ V D LL GK+ +
Sbjct: 290 QEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQ 336
>TAIR|locus:2040565 [details] [associations]
symbol:AT2G36730 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR002885
EMBL:CP002685 GenomeReviews:CT485783_GR PROSITE:PS51375
EMBL:AC006282 Pfam:PF01535 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569
IPI:IPI00541658 PIR:A84784 RefSeq:NP_181211.1 UniGene:At.66328
ProteinModelPortal:Q9ZQA1 PaxDb:Q9ZQA1 PRIDE:Q9ZQA1
EnsemblPlants:AT2G36730.1 GeneID:818245 KEGG:ath:AT2G36730
GeneFarm:3668 TAIR:At2g36730 eggNOG:NOG273447 InParanoid:Q9ZQA1
OMA:YGAMVDI PhylomeDB:Q9ZQA1 ProtClustDB:CLSN2683944
Genevestigator:Q9ZQA1 Uniprot:Q9ZQA1
Length = 501
Score = 186 (70.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 33/86 (38%), Positives = 54/86 (62%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K + VRPN+ TF+GV+ AC G VD+G+++F + + + I P + H+ +VD+ GR
Sbjct: 303 KMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGR 362
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
++ EA +FI+ M + +VVW TL
Sbjct: 363 AGRLNEAYDFIKKMPFEPDAVVWRTL 388
>TAIR|locus:2141171 [details] [associations]
symbol:AT4G21300 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161554 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL021960
EMBL:AL031187 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00535848 PIR:T05172 RefSeq:NP_193861.1
UniGene:At.66596 ProteinModelPortal:Q9STE1 SMR:Q9STE1 PRIDE:Q9STE1
EnsemblPlants:AT4G21300.1 GeneID:827878 KEGG:ath:AT4G21300
GeneFarm:3874 TAIR:At4g21300 eggNOG:NOG315457 InParanoid:Q9STE1
OMA:ISGYVLN PhylomeDB:Q9STE1 ProtClustDB:CLSN2685364
Genevestigator:Q9STE1 Uniprot:Q9STE1
Length = 857
Score = 187 (70.9 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 46/127 (36%), Positives = 68/127 (53%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLK--LLEAGKRFENDGVRPNWSTFVGVI 72
+KAA+ V +K I + II LK L + E G+RP+ TF+ +I
Sbjct: 593 LKAAMNVFKTMKEKNI-VSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEII 651
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDAS 132
++C G VDEG + F S+T DY I P EH+ +VDL+GR ++ EA E +++M
Sbjct: 652 SSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPD 711
Query: 133 SVVWETL 139
+ VW TL
Sbjct: 712 AGVWGTL 718
>TAIR|locus:2155740 [details] [associations]
symbol:AT5G65570 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AB026639 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00535497 RefSeq:NP_201360.1 UniGene:At.55704
ProteinModelPortal:Q9LSL8 SMR:Q9LSL8 PRIDE:Q9LSL8
EnsemblPlants:AT5G65570.1 GeneID:836683 KEGG:ath:AT5G65570
GeneFarm:3433 TAIR:At5g65570 eggNOG:NOG284207 InParanoid:Q9LSL8
OMA:KKNPAMS PhylomeDB:Q9LSL8 ProtClustDB:CLSN2686627
Genevestigator:Q9LSL8 Uniprot:Q9LSL8
Length = 738
Score = 186 (70.5 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 61/243 (25%), Positives = 113/243 (46%)
Query: 13 REVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVI 72
R V+ E+ D + I L + ++++ LE + + + P+ + ++
Sbjct: 483 RLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLL 542
Query: 73 TACGCFGAVDEGFQHFESVTRDY-DINPTLEHFLGIV-DLY---GRLQKIAEAREFIRNM 127
+AC V+ E +TR +I P E L ++ +LY G+ ++ E + +++M
Sbjct: 543 SACKVHRKVEMA----ERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDM 598
Query: 128 QIDASSVV-WETLEKYAQTXXXXXXXXXXXXXXXXN-------KKKDAGYMPYTEYVLRD 179
++ + + W + K T K KD GY+ V +D
Sbjct: 599 KLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQD 658
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREII 239
+++ AKE+ SE+LA+A+ + G ++RI KNLR+C +CH++IK +S + REII
Sbjct: 659 MEETAKERSLHQHSEKLAIAFAVWRNVGG-SIRILKNLRVCVDCHSWIKIVSRVMKREII 717
Query: 240 VRD 242
RD
Sbjct: 718 CRD 720
Score = 124 (48.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 36/119 (30%), Positives = 58/119 (48%)
Query: 21 VMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGA 80
V D L + + + I + L+ +R N G++PN T + V+ AC
Sbjct: 425 VFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL 484
Query: 81 VDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
V+EG + F+S +D I T +H+ +VDL GR ++ EA E + I+ V+W TL
Sbjct: 485 VEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTL 541
>TAIR|locus:2064828 [details] [associations]
symbol:AT2G40720 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 IPI:IPI00544227 PIR:A84833 RefSeq:NP_181604.1
UniGene:At.42919 UniGene:At.42920 ProteinModelPortal:Q7XJN6
SMR:Q7XJN6 EnsemblPlants:AT2G40720.1 GeneID:818667
KEGG:ath:AT2G40720 GeneFarm:3676 TAIR:At2g40720 eggNOG:NOG275300
InParanoid:Q7XJN6 OMA:MYVKCGF PhylomeDB:Q7XJN6
ProtClustDB:CLSN2683637 Genevestigator:Q7XJN6 Uniprot:Q7XJN6
Length = 860
Score = 166 (63.5 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 35/86 (40%), Positives = 51/86 (59%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G P+ TF+ +I+AC G V+EG FE + +DY I P +EH+ +VDL GR + E
Sbjct: 673 GESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEE 732
Query: 120 AREFIRNMQIDASSVVWETLEKYAQT 145
A FI+ M I+A S +W L ++T
Sbjct: 733 AYSFIKAMPIEADSSIWLCLLSASRT 758
Score = 55 (24.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 4 SELKHLCREREVKAALEVMDKLKNIGIFL--DSPDIIELLNVCMDLKLLEAGKRFENDGV 61
S + LC+ + K AL+V +K+ L DS + + N C L+ L G + +
Sbjct: 444 SLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMI 503
Query: 62 RPNW--STFVG 70
+ + FVG
Sbjct: 504 KTGLVLNVFVG 514
Score = 39 (18.8 bits), Expect = 9.7e-12, Sum P(2) = 9.7e-12
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK 54
NS + R + ++++ + + + GIF DS I +L L GK
Sbjct: 546 NSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGK 597
>TAIR|locus:2018668 [details] [associations]
symbol:AT1G28690 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 CAZy:GT77
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC007508
Pfam:PF13041 EMBL:DQ446304 EMBL:DQ652867 IPI:IPI00536155
RefSeq:NP_174190.2 UniGene:At.64385 ProteinModelPortal:Q1PFQ9
SMR:Q1PFQ9 PRIDE:Q1PFQ9 EnsemblPlants:AT1G28690.1 GeneID:839769
KEGG:ath:AT1G28690 GeneFarm:3600 TAIR:At1g28690 eggNOG:NOG291516
HOGENOM:HOG000240077 OMA:SMISGYM PhylomeDB:Q1PFQ9
ProtClustDB:CLSN2680730 Genevestigator:Q1PFQ9 Uniprot:Q1PFQ9
Length = 520
Score = 183 (69.5 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 37/90 (41%), Positives = 53/90 (58%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE R + + PN+ TF+G ++AC G VD+G++ FES+ RDY + P +EH+ IVD
Sbjct: 359 LELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVD 418
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
L GR + +A EF R M S +W L
Sbjct: 419 LMGRAGDLNKAFEFARAMPERPDSDIWAAL 448
>TAIR|locus:2083961 [details] [associations]
symbol:AT3G53360 "AT3G53360" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132966
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00530217 PIR:T45876
RefSeq:NP_190904.1 UniGene:At.53917 ProteinModelPortal:Q9LFI1
SMR:Q9LFI1 PRIDE:Q9LFI1 EnsemblPlants:AT3G53360.1 GeneID:824504
KEGG:ath:AT3G53360 GeneFarm:3704 TAIR:At3g53360 eggNOG:NOG266845
InParanoid:Q9LFI1 OMA:WNSILTA PhylomeDB:Q9LFI1
ProtClustDB:CLSN2684918 Genevestigator:Q9LFI1 Uniprot:Q9LFI1
Length = 768
Score = 184 (69.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 36/92 (39%), Positives = 56/92 (60%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K ++ G+ PN TFVGV+TAC G V+EG + + ++ ++ I+PT EH +VDL R
Sbjct: 563 KEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLAR 622
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQT 145
++ EA FI M+++ VVW+TL +T
Sbjct: 623 AGRLNEAERFIDEMKLEPDVVVWKTLLSACKT 654
>TAIR|locus:2010012 [details] [associations]
symbol:AT1G13410 "AT1G13410" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK226699 IPI:IPI00548139 RefSeq:NP_172798.2 UniGene:At.51594
ProteinModelPortal:Q0WVP2 SMR:Q0WVP2 STRING:Q0WVP2 PaxDb:Q0WVP2
PRIDE:Q0WVP2 EnsemblPlants:AT1G13410.1 GeneID:837901
KEGG:ath:AT1G13410 TAIR:At1g13410 eggNOG:NOG254840
InParanoid:Q0WVP2 OMA:KVAMRDT PhylomeDB:Q0WVP2
ProtClustDB:CLSN2920227 Genevestigator:Q0WVP2 Uniprot:Q0WVP2
Length = 474
Score = 175 (66.7 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
+N G+ P+ TFVGV+ AC G V++G +F S+ D+ I P +EH +VDL R
Sbjct: 282 KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGF 341
Query: 117 IAEAREFIRNMQIDASSVVWETL 139
+ +A EFI M + A +V+W TL
Sbjct: 342 LTQAVEFINKMPVKADAVIWATL 364
>TAIR|locus:2094812 [details] [associations]
symbol:AT3G29230 "AT3G29230" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AB026657
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00545218
RefSeq:NP_189568.1 UniGene:At.65178 ProteinModelPortal:Q9LS72
SMR:Q9LS72 PaxDb:Q9LS72 PRIDE:Q9LS72 EnsemblPlants:AT3G29230.1
GeneID:822578 KEGG:ath:AT3G29230 GeneFarm:3696 TAIR:At3g29230
eggNOG:NOG247239 InParanoid:Q9LS72 OMA:NTILDGY PhylomeDB:Q9LS72
ProtClustDB:CLSN2684108 Genevestigator:Q9LS72 Uniprot:Q9LS72
Length = 600
Score = 176 (67.0 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 31/90 (34%), Positives = 56/90 (62%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
+E R +G+RP+ TF+ V+ +C G +DEG +F S+ + YD+ P +EH+ +VD
Sbjct: 401 IELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVD 460
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
L GR+ ++ EA + ++ M ++ + V+W L
Sbjct: 461 LLGRVGRLKEAIKVVQTMPMEPNVVIWGAL 490
>TAIR|locus:2150996 [details] [associations]
symbol:AT5G15300 "AT5G15300" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL353993 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:BX832059 IPI:IPI00547309
PIR:T49965 RefSeq:NP_197034.2 UniGene:At.66735
ProteinModelPortal:Q9LXF2 PRIDE:Q9LXF2 EnsemblPlants:AT5G15300.1
GeneID:831382 KEGG:ath:AT5G15300 GeneFarm:4219 TAIR:At5g15300
eggNOG:NOG243318 InParanoid:Q9LXF2 OMA:AVAWSAM
ProtClustDB:CLSN2681047 Genevestigator:Q9LXF2 Uniprot:Q9LXF2
Length = 548
Score = 175 (66.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 36/80 (45%), Positives = 55/80 (68%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHFLGIVDLYGRLQKIAE 119
V PN TF+GVI AC G VDEG ++F S+ RD Y+I P ++H+ +VD+ GR ++ E
Sbjct: 376 VWPNEVTFIGVILACSHSGRVDEGRKYF-SLMRDMYNIEPNIKHYGCMVDMLGRAGQLEE 434
Query: 120 AREFIRNMQIDASSVVWETL 139
A F+ +M+I+ +++VW TL
Sbjct: 435 AFMFVESMKIEPNAIVWRTL 454
>TAIR|locus:2054131 [details] [associations]
symbol:SLO2 "AT2G13600" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0010182 "sugar mediated
signaling pathway" evidence=IMP] [GO:0080156 "mitochondrial mRNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC007063
GO:GO:0010182 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570 GO:GO:0080156
IPI:IPI00529256 PIR:H84508 RefSeq:NP_178983.1 UniGene:At.52726
ProteinModelPortal:Q9SIT7 SMR:Q9SIT7 EnsemblPlants:AT2G13600.1
GeneID:815845 KEGG:ath:AT2G13600 GeneFarm:3687 TAIR:At2g13600
eggNOG:NOG311224 InParanoid:Q9SIT7 OMA:GFAQHDR PhylomeDB:Q9SIT7
ProtClustDB:CLSN2683340 Genevestigator:Q9SIT7 Uniprot:Q9SIT7
Length = 697
Score = 176 (67.0 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 34/90 (37%), Positives = 53/90 (58%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE + G +P+ T +GV++ACG G V+EG +F S+TRD+ + P +H+ +VD
Sbjct: 478 LELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
L GR + EA+ I M + SV+W +L
Sbjct: 538 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSL 567
>TAIR|locus:2117084 [details] [associations]
symbol:AT4G18840 "AT4G18840" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL021711 EMBL:AL161549
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00520324 PIR:E85212
PIR:T05021 RefSeq:NP_193619.1 UniGene:At.65398
ProteinModelPortal:O49399 SMR:O49399 PRIDE:O49399
EnsemblPlants:AT4G18840.1 GeneID:827618 KEGG:ath:AT4G18840
GeneFarm:4035 TAIR:At4g18840 eggNOG:NOG265885 InParanoid:O49399
OMA:SQGEWVH PhylomeDB:O49399 ProtClustDB:CLSN2685461
Genevestigator:O49399 Uniprot:O49399
Length = 545
Score = 174 (66.3 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 34/90 (37%), Positives = 55/90 (61%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE +G +PN TF+GV++AC G +D+ + FE ++ Y + PT+EH+ +VD
Sbjct: 390 LEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVD 449
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
L GR+ KI EA E + + D +S++ E+L
Sbjct: 450 LLGRMGKIEEAEELVNEIPADEASILLESL 479
>TAIR|locus:2161018 [details] [associations]
symbol:AT5G56310 "AT5G56310" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 EMBL:AB009049
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 EMBL:AK229016 IPI:IPI00527231
RefSeq:NP_200442.1 UniGene:At.70454 ProteinModelPortal:Q9FMA1
SMR:Q9FMA1 PRIDE:Q9FMA1 EnsemblPlants:AT5G56310.1 GeneID:835730
KEGG:ath:AT5G56310 GeneFarm:4045 TAIR:At5g56310 eggNOG:NOG310822
InParanoid:Q9FMA1 OMA:KANAAIW PhylomeDB:Q9FMA1
ProtClustDB:CLSN2687172 Genevestigator:Q9FMA1 Uniprot:Q9FMA1
Length = 530
Score = 173 (66.0 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 41/137 (29%), Positives = 69/137 (50%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + + + AL+V + + + + I L + L R GVR
Sbjct: 289 NAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVR 348
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN TF+ +++AC G VD G + F S+ Y I+P +EH+ ++DL GR K+ EA E
Sbjct: 349 PNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADE 408
Query: 123 FIRNMQIDASSVVWETL 139
I++M A++ +W +L
Sbjct: 409 VIKSMPFKANAAIWGSL 425
>TAIR|locus:2170877 [details] [associations]
symbol:AT5G43790 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR PROSITE:PS51375 EMBL:AB026651
Pfam:PF01535 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569 EMBL:AY124001
IPI:IPI00535786 RefSeq:NP_199192.1 UniGene:At.9039
ProteinModelPortal:Q9FG85 SMR:Q9FG85 EnsemblPlants:AT5G43790.1
GeneID:834401 KEGG:ath:AT5G43790 GeneFarm:4042 TAIR:At5g43790
eggNOG:NOG254263 InParanoid:Q9FG85 OMA:YPSLFKA PhylomeDB:Q9FG85
ProtClustDB:CLSN2916499 Genevestigator:Q9FG85 Uniprot:Q9FG85
Length = 460
Score = 167 (63.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 36/96 (37%), Positives = 55/96 (57%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
+E K + G+ P+ +TFV I+AC G VDEG Q F S+ Y I P +EH+ +VD
Sbjct: 302 IELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVD 361
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQT 145
L GR ++ EA E I+ M + ++ +W + +QT
Sbjct: 362 LLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQT 397
>TAIR|locus:2202790 [details] [associations]
symbol:AT1G26900 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
PROSITE:PS51375 EMBL:AC005508 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF12854 HOGENOM:HOG000237569 IPI:IPI00537866 PIR:H86395
RefSeq:NP_174012.1 UniGene:At.65039 ProteinModelPortal:Q9ZVG8
SMR:Q9ZVG8 PaxDb:Q9ZVG8 PRIDE:Q9ZVG8 EnsemblPlants:AT1G26900.1
GeneID:838376 KEGG:ath:AT1G26900 GeneFarm:3642 TAIR:At1g26900
eggNOG:NOG299513 InParanoid:Q9ZVG8 OMA:HPSDAIL PhylomeDB:Q9ZVG8
ProtClustDB:CLSN2682854 Genevestigator:Q9ZVG8 Uniprot:Q9ZVG8
Length = 572
Score = 165 (63.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 35/83 (42%), Positives = 47/83 (56%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
EN VRPN TF+ V+ AC G V EG + F+ + Y P +EH+ +VDL GR +
Sbjct: 423 ENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQ 482
Query: 117 IAEAREFIRNMQIDASSVVWETL 139
+ EA E IRN+ I + S W L
Sbjct: 483 LEEAYELIRNLPITSDSTAWRAL 505
>TAIR|locus:2054789 [details] [associations]
symbol:MEF21 "mitochondrial editing factor 21"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0080156 "mitochondrial mRNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
EMBL:AC007109 Pfam:PF13041 GO:GO:0080156 HOGENOM:HOG000237569
EMBL:DQ056537 IPI:IPI00521897 PIR:E84590 RefSeq:NP_179644.1
UniGene:At.50086 ProteinModelPortal:Q9SIL5 SMR:Q9SIL5
EnsemblPlants:AT2G20540.1 GeneID:816576 KEGG:ath:AT2G20540
GeneFarm:3690 TAIR:At2g20540 eggNOG:NOG269713 InParanoid:Q9SIL5
OMA:ICNALME PhylomeDB:Q9SIL5 ProtClustDB:CLSN2683323
Genevestigator:Q9SIL5 Uniprot:Q9SIL5
Length = 534
Score = 155 (59.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 29/96 (30%), Positives = 52/96 (54%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
+E + V+PN TF+G+++AC G EG ++F+ + +DY I P +EH+ ++D
Sbjct: 327 IETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLID 386
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQT 145
+ R K+ A E + M + S +W +L +T
Sbjct: 387 VLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRT 422
Score = 47 (21.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 19 LEVMDKLKNIGIFLDSPDIIELLNV---CMDLKLLEAGK 54
+E MD + + + PD I L++V C L LE GK
Sbjct: 223 VEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGK 261
>TAIR|locus:2195980 [details] [associations]
symbol:AT1G77170 "AT1G77170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC004260 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00518933 RefSeq:NP_177842.1
UniGene:At.21362 ProteinModelPortal:Q3ECB8 PaxDb:Q3ECB8
EnsemblPlants:AT1G77170.1 GeneID:844054 KEGG:ath:AT1G77170
GeneFarm:3631 TAIR:At1g77170 eggNOG:NOG311468 InParanoid:Q3ECB8
OMA:LEPWNDG PhylomeDB:Q3ECB8 ProtClustDB:CLSN2682973
Genevestigator:Q3ECB8 Uniprot:Q3ECB8
Length = 467
Score = 161 (61.7 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 34/93 (36%), Positives = 55/93 (59%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
L+ LE ++ GVRPN TFVGV++AC G V+EG +F + ++++ P L H+
Sbjct: 303 LEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGC 362
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
IVDL R ++ EA++ + M + + +VW L
Sbjct: 363 IVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCL 395
>TAIR|locus:4515103421 [details] [associations]
symbol:AT4G19191 "AT4G19191" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL021687 EMBL:AL161550
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
eggNOG:NOG310150 Pfam:PF13041 IPI:IPI00529517 PIR:T04440
RefSeq:NP_001119013.1 UniGene:At.74330 ProteinModelPortal:P0C8Q2
SMR:P0C8Q2 PRIDE:P0C8Q2 EnsemblPlants:AT4G19191.1 GeneID:6240220
KEGG:ath:AT4G19191 TAIR:At4g19191 HOGENOM:HOG000115637 OMA:KRDVASW
PhylomeDB:P0C8Q2 ProtClustDB:CLSN2708526 Genevestigator:P0C8Q2
Uniprot:P0C8Q2
Length = 654
Score = 162 (62.1 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 36/93 (38%), Positives = 56/93 (60%)
Query: 50 LEAGKRFEN--D-GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
LEA K F D +PN TF+ V+ AC G++++G+++F + + Y+I+P L+H+
Sbjct: 441 LEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSC 500
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+VDL GR K+ EA E IRNM + +W L
Sbjct: 501 MVDLLGRKGKLEEALELIRNMSAKPDAGIWGAL 533
>TAIR|locus:2196583 [details] [associations]
symbol:ECB2 "EARLY CHLOROPLAST BIOGENESIS2" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009451 "RNA modification" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IEP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0040007 GO:GO:0009507 GO:GO:0009658
EMBL:AC013453 GO:GO:0009416 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 GO:GO:0009451
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00522462 PIR:H86288
RefSeq:NP_173004.1 UniGene:At.41931 ProteinModelPortal:Q9M9E2
SMR:Q9M9E2 PRIDE:Q9M9E2 EnsemblPlants:AT1G15510.1 GeneID:838121
KEGG:ath:AT1G15510 GeneFarm:3519 TAIR:At1g15510 eggNOG:NOG295763
InParanoid:Q9M9E2 OMA:FCGHSER PhylomeDB:Q9M9E2 ProtClustDB:PLN03077
ArrayExpress:Q9M9E2 Genevestigator:Q9M9E2 Uniprot:Q9M9E2
Length = 866
Score = 150 (57.9 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 56/245 (22%), Positives = 112/245 (45%)
Query: 11 REREVKAALEVMDKLKNIGIFLDSPD---IIELLNVCMDLKLLEAGKRFENDGVRPNWST 67
+ + V+ L K+++ G+ + +++LL +L+ EA K + V P+ +
Sbjct: 610 KSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQ--EAHKFIQKMPVTPDPAV 667
Query: 68 FVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLY---GRLQKIAEAREFI 124
+ ++ AC +D G + + + D ++ +++ + +LY G+ +++A+ R +
Sbjct: 668 WGALLNACRIHHKIDLGELSAQHIF-ELD-KKSVGYYILLCNLYADCGKWREVAKVRRMM 725
Query: 125 RN--MQIDASSVVWETLEK-YA----QTXXXXXXXXXXXXXXXXNKKKDAGYMPYTEYVL 177
+ + +DA E K +A K + G +E
Sbjct: 726 KENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSS 785
Query: 178 RDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENRE 237
D + ++++ SER A+A+GLI+T PG + + KNL +C CH+ +K +S RE
Sbjct: 786 MDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRRE 845
Query: 238 IIVRD 242
I VRD
Sbjct: 846 ISVRD 850
Score = 144 (55.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 49 LLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIV 108
++E R VRP+ TF+ ++ C V +G +F + DY + P L+H+ +V
Sbjct: 582 VVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVV 640
Query: 109 DLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
DL GR ++ EA +FI+ M + VW L
Sbjct: 641 DLLGRAGELQEAHKFIQKMPVTPDPAVWGAL 671
Score = 63 (27.2 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 11/53 (20%), Positives = 30/53 (56%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR 55
NS+L LC +++ A+++++ ++ + + +D + L+ +C + E G +
Sbjct: 63 NSQLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSK 115
>TAIR|locus:2090444 [details] [associations]
symbol:AT3G22150 "AT3G22150" species:3702 "Arabidopsis
thaliana" [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AP001306 Pfam:PF13041
EMBL:AK229803 IPI:IPI00524640 RefSeq:NP_188854.1 UniGene:At.37924
ProteinModelPortal:Q9LIE7 SMR:Q9LIE7 EnsemblPlants:AT3G22150.1
GeneID:821779 KEGG:ath:AT3G22150 GeneFarm:3869 TAIR:At3g22150
eggNOG:NOG291997 HOGENOM:HOG000241004 InParanoid:Q9LIE7 OMA:EVWNTMI
PhylomeDB:Q9LIE7 ProtClustDB:CLSN2685299 Genevestigator:Q9LIE7
Uniprot:Q9LIE7
Length = 820
Score = 160 (61.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 29/84 (34%), Positives = 53/84 (63%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
+ G++P+ TFV V++AC G +DEG + FE + Y+I P+ EH+ I D+ GR+ +
Sbjct: 614 QESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGR 673
Query: 117 IAEAREFIRNMQIDAS-SVVWETL 139
+ EA EF++ + + + + +W +L
Sbjct: 674 VNEAYEFVKGLGEEGNIAELWGSL 697
Score = 36 (17.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 18 ALEVMDKLKNIGIFL--DSPDIIELLNVCMDLKLLEAGK 54
AL ++K F D+ L C + K L+AGK
Sbjct: 89 ALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGK 127
>TAIR|locus:2198678 [details] [associations]
symbol:PDE247 "pigment defective 247" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009451 "RNA modification" evidence=IMP] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC009999 Pfam:PF01535
TIGRFAMs:TIGR00756 GO:GO:0009451 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000237569 EMBL:AK221614 IPI:IPI00538485 PIR:H86191
RefSeq:NP_172066.3 UniGene:At.11883 UniGene:At.49857
ProteinModelPortal:Q9MA50 SMR:Q9MA50 STRING:Q9MA50
EnsemblPlants:AT1G05750.1 GeneID:837083 KEGG:ath:AT1G05750
GeneFarm:3607 TAIR:At1g05750 eggNOG:NOG296548 InParanoid:Q9MA50
OMA:FKPDAVT PhylomeDB:Q9MA50 ProtClustDB:CLSN2693257
Genevestigator:Q9MA50 Uniprot:Q9MA50
Length = 500
Score = 159 (61.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 28/82 (34%), Positives = 52/82 (63%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
++ + G +P+ TF G +TAC G V+EG ++F+ + DY I+P +EH+ +VDLY R
Sbjct: 296 RKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSR 355
Query: 114 LQKIAEAREFIRNMQIDASSVV 135
++ +A + +++M + + VV
Sbjct: 356 AGRLEDALKLVQSMPMKPNEVV 377
>TAIR|locus:2825379 [details] [associations]
symbol:AT1G71490 "AT1G71490" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC016163 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
EMBL:AK117951 EMBL:BT020313 EMBL:BT020458 IPI:IPI00531417
IPI:IPI00896803 RefSeq:NP_177305.1 UniGene:At.43507
UniGene:At.71175 UniGene:At.75242 ProteinModelPortal:Q9C9I6
SMR:Q9C9I6 PRIDE:Q9C9I6 EnsemblPlants:AT1G71490.1 GeneID:843490
KEGG:ath:AT1G71490 GeneFarm:4225 TAIR:At1g71490 eggNOG:NOG288602
HOGENOM:HOG000115617 InParanoid:Q9C9I6 OMA:YYVLIAN PhylomeDB:Q9C9I6
ProtClustDB:CLSN2679260 Genevestigator:Q9C9I6 Uniprot:Q9C9I6
Length = 681
Score = 158 (60.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 33/86 (38%), Positives = 47/86 (54%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K G++P+ T V V++AC V EG + F + +Y I P L+HF +VDLYGR
Sbjct: 472 KEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGR 531
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
+A+A++ I NM S W TL
Sbjct: 532 AGFLAKAKDIIHNMPYKPSGATWATL 557
Score = 36 (17.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDII-----ELLNVCMDLKLLEAG 53
L L HL + A + L+ S D++ LL+ C+D++ AG
Sbjct: 6 LFKSLGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAG 62
>TAIR|locus:2049736 [details] [associations]
symbol:AT2G37320 "AT2G37320" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC005896 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
EMBL:BT010613 EMBL:AK175809 IPI:IPI00524790 PIR:C84791
RefSeq:NP_181269.1 UniGene:At.37440 UniGene:At.73229
ProteinModelPortal:Q9ZUT4 SMR:Q9ZUT4 PRIDE:Q9ZUT4
EnsemblPlants:AT2G37320.1 GeneID:818309 KEGG:ath:AT2G37320
GeneFarm:3674 TAIR:At2g37320 eggNOG:NOG269030 HOGENOM:HOG000070656
InParanoid:Q9ZUT4 OMA:CAATHVQ PhylomeDB:Q9ZUT4
ProtClustDB:CLSN2683975 Genevestigator:Q9ZUT4 Uniprot:Q9ZUT4
Length = 500
Score = 158 (60.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 38/138 (27%), Positives = 71/138 (51%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK-RFENDGV 61
NS + C+ ++K A + D+ N + + I + ++ +E + G
Sbjct: 260 NSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGT 319
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
+P+ T++GV+++C G V EG + F ++ ++ + P L H+ +VDL GR + EA
Sbjct: 320 KPDAITYLGVLSSCRHAGLVKEGRKFF-NLMAEHGLKPELNHYSCLVDLLGRFGLLQEAL 378
Query: 122 EFIRNMQIDASSVVWETL 139
E I NM + +SV+W +L
Sbjct: 379 ELIENMPMKPNSVIWGSL 396
>TAIR|locus:505006163 [details] [associations]
symbol:AT1G32415 "AT1G32415" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 EMBL:AC007767
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00540324 PIR:B86449 RefSeq:NP_564401.1 UniGene:At.51879
ProteinModelPortal:P0C7R0 SMR:P0C7R0 PaxDb:P0C7R0 PRIDE:P0C7R0
EnsemblPlants:AT1G32415.1 GeneID:840135 KEGG:ath:AT1G32415
GeneFarm:3603 TAIR:At1g32415 eggNOG:NOG260565 OMA:ISLAYAC
PhylomeDB:P0C7R0 ProtClustDB:CLSN2688200 Genevestigator:P0C7R0
Uniprot:P0C7R0
Length = 761
Score = 160 (61.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L K + G +PN TF+GV++AC G + G + F+++ Y I P ++H++ +
Sbjct: 552 KALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISM 611
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+DL GR K+ EA EFI + V+ L
Sbjct: 612 IDLLGRAGKLKEAEEFISALPFTPDHTVYGAL 643
>TAIR|locus:2025242 [details] [associations]
symbol:AT1G77010 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 EMBL:AC002291 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 IPI:IPI00530062 PIR:B96799
RefSeq:NP_177827.1 UniGene:At.52541 ProteinModelPortal:O49287
SMR:O49287 PaxDb:O49287 PRIDE:O49287 EnsemblPlants:AT1G77010.1
GeneID:844037 KEGG:ath:AT1G77010 GeneFarm:3630 TAIR:At1g77010
eggNOG:NOG274540 HOGENOM:HOG000083580 InParanoid:O49287 OMA:NTMIEGY
PhylomeDB:O49287 ProtClustDB:CLSN2682961 Genevestigator:O49287
Uniprot:O49287
Length = 695
Score = 147 (56.8 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 31/86 (36%), Positives = 45/86 (52%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K+ G+RP TF+ V+TAC G V+EG + FES+ D+ P EHF +VDL R
Sbjct: 540 KKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLAR 599
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
+ EA + M D +W ++
Sbjct: 600 AGYVEEAINLVEEMPFDVDGSMWSSI 625
Score = 49 (22.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR 55
AL + ++++N DS + ++N C+ L LE GK+
Sbjct: 303 ALVLFNEMRN-ETREDSRTLAAVINACIGLGFLETGKQ 339
>TAIR|locus:2087969 [details] [associations]
symbol:AT3G13880 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AB028610 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:BX824350
IPI:IPI00540943 RefSeq:NP_188004.1 UniGene:At.50181
ProteinModelPortal:Q9LRV9 SMR:Q9LRV9 PRIDE:Q9LRV9
EnsemblPlants:AT3G13880.1 GeneID:820601 KEGG:ath:AT3G13880
GeneFarm:3843 TAIR:At3g13880 eggNOG:NOG298605 InParanoid:Q9LRV9
OMA:MNACASL PhylomeDB:Q9LRV9 ProtClustDB:CLSN2722886
Genevestigator:Q9LRV9 Uniprot:Q9LRV9
Length = 748
Score = 156 (60.0 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 37/136 (27%), Positives = 64/136 (47%)
Query: 4 SELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRP 63
S + + + A +V +++N + S I L + L + + G++P
Sbjct: 499 SSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKP 558
Query: 64 NWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREF 123
N F+GV+ AC G V +G ++F+ + DY INP +HF +VDL GR ++++A
Sbjct: 559 NQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENL 618
Query: 124 IRNMQIDASSVVWETL 139
I + V W L
Sbjct: 619 ILSSGFQDHPVTWRAL 634
>TAIR|locus:2159602 [details] [associations]
symbol:AT5G08510 "AT5G08510" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB006697 Pfam:PF13041
HOGENOM:HOG000237569 EMBL:BT015162 EMBL:AK226649 IPI:IPI00536311
RefSeq:NP_196468.1 UniGene:At.24658 ProteinModelPortal:Q9FNN7
SMR:Q9FNN7 PRIDE:Q9FNN7 EnsemblPlants:AT5G08510.1 GeneID:830750
KEGG:ath:AT5G08510 GeneFarm:4218 TAIR:At5g08510 eggNOG:NOG254377
InParanoid:Q9FNN7 OMA:NLCSWNS PhylomeDB:Q9FNN7
ProtClustDB:CLSN2687299 Genevestigator:Q9FNN7 Uniprot:Q9FNN7
Length = 511
Score = 154 (59.3 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+G +P+ TFVG++ AC G V +G + F+S+ + I+P LEH+ ++DL GR+ K+
Sbjct: 311 EGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQ 370
Query: 119 EAREFIRNMQIDASSVVWETL 139
EA + I+ M + +VVW TL
Sbjct: 371 EAYDLIKTMPMKPDAVVWGTL 391
>TAIR|locus:2181201 [details] [associations]
symbol:AT5G27110 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 EMBL:AF007271 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 HOGENOM:HOG000237570 IPI:IPI00518722 PIR:T01808
RefSeq:NP_198063.1 UniGene:At.65555 UniGene:At.74336
ProteinModelPortal:O04659 SMR:O04659 STRING:O04659 PaxDb:O04659
PRIDE:O04659 EnsemblPlants:AT5G27110.1 GeneID:832769
KEGG:ath:AT5G27110 GeneFarm:4221 TAIR:At5g27110 eggNOG:NOG251542
OMA:SILMACS PhylomeDB:O04659 ProtClustDB:CLSN2686965
Genevestigator:O04659 Uniprot:O04659
Length = 691
Score = 137 (53.3 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++P+ T + V++ACG G +DEG + F + Y I P +EH+ ++D+ GR ++ E
Sbjct: 506 GLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLE 565
Query: 120 AREFIR 125
A E I+
Sbjct: 566 AYEIIQ 571
Score = 60 (26.2 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR 55
A+EV D++ ++G+ D +L C L LE GK+
Sbjct: 394 AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQ 431
>TAIR|locus:2132452 [details] [associations]
symbol:AT4G08210 "AT4G08210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL080252 EMBL:AL161510
Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00547188
PIR:T10548 RefSeq:NP_192561.1 UniGene:At.65338
ProteinModelPortal:Q9SUF9 SMR:Q9SUF9 PRIDE:Q9SUF9
EnsemblPlants:AT4G08210.1 GeneID:826371 KEGG:ath:AT4G08210
GeneFarm:4031 TAIR:At4g08210 eggNOG:NOG237305 InParanoid:Q9SUF9
OMA:LGACGTH PhylomeDB:Q9SUF9 ProtClustDB:CLSN2685961
Genevestigator:Q9SUF9 Uniprot:Q9SUF9
Length = 686
Score = 152 (58.6 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
N G+ PN TF+G+++AC G ++E E++ +Y + P LEH+ +VDL G+
Sbjct: 537 NIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLF 596
Query: 118 AEAREFIRNMQIDASSVVWETL 139
EA E I M ++ +W +L
Sbjct: 597 QEANELINKMPLEPDKTIWTSL 618
Score = 39 (18.8 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG 53
NS L E +AAL ++ ++ + DS + L +C++ L G
Sbjct: 311 NSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLG 361
Score = 38 (18.4 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 45 MDLKLLEAGKR 55
MDLKL+ AG R
Sbjct: 3 MDLKLIAAGLR 13
Score = 36 (17.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR 55
ALE + +++ G+ LD + L C LL GK+
Sbjct: 222 ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQ 259
>TAIR|locus:2040859 [details] [associations]
symbol:AT2G34370 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 GO:GO:0005739
EMBL:CP002685 GenomeReviews:CT485783_GR PROSITE:PS51375
EMBL:AC004077 EMBL:AC004481 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 HOGENOM:HOG000237569 EMBL:DQ056566
IPI:IPI00532479 PIR:T02325 RefSeq:NP_180984.1 UniGene:At.53032
ProteinModelPortal:Q8S8Q7 SMR:Q8S8Q7 PRIDE:Q8S8Q7
EnsemblPlants:AT2G34370.1 GeneID:818000 KEGG:ath:AT2G34370
GeneFarm:3234 TAIR:At2g34370 eggNOG:NOG300740 InParanoid:Q8S8Q7
OMA:SVEMWET PhylomeDB:Q8S8Q7 ProtClustDB:CLSN2682015
Genevestigator:Q8S8Q7 Uniprot:Q8S8Q7
Length = 469
Score = 152 (58.6 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 28/85 (32%), Positives = 49/85 (57%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
RF +G +P+ F V AC G ++EG HFES+ RDY + ++E ++ ++++
Sbjct: 199 RFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAAC 258
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
+ EA +F+ M ++ S +WETL
Sbjct: 259 GHLDEALDFVERMTVEPSVEMWETL 283
Score = 140 (54.3 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 53/215 (24%), Positives = 95/215 (44%)
Query: 33 DSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVT 92
D ++IE+L C L EA E V P+ + ++ C G ++ G F +
Sbjct: 247 DYVNVIEMLAACGHLD--EALDFVERMTVEPSVEMWETLMNLCWVQGYLELG-DRFAELI 303
Query: 93 RDYDINP-TLEHFLGIVDLYGR---LQKIAEAREFIRNMQIDASSVVWETLEKYAQTXXX 148
+ D + + E G+V ++K+ E R + + ++ D + E + T
Sbjct: 304 KKLDASRMSKESNAGLVAAKASDSAMEKLKELR-YCQMIRDDPKKRMHEF--RAGDTSHL 360
Query: 149 XXXXXXXXXXXXXNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPG 208
+ D G++P T +++E KE+ +RS +LA A+ +I++
Sbjct: 361 GTVSAFRSLKV---QMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEAR 417
Query: 209 RTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
R L + +N+R C + HN K +S I R +I RDK
Sbjct: 418 RPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDK 452
>TAIR|locus:2063771 [details] [associations]
symbol:AT2G03380 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC006284
HOGENOM:HOG000237570 IPI:IPI00538767 PIR:G84447 RefSeq:NP_178437.1
UniGene:At.52621 ProteinModelPortal:Q9ZQ74 SMR:Q9ZQ74 PaxDb:Q9ZQ74
PRIDE:Q9ZQ74 EnsemblPlants:AT2G03380.1 GeneID:814867
KEGG:ath:AT2G03380 GeneFarm:3664 TAIR:At2g03380 eggNOG:NOG251025
InParanoid:Q9ZQ74 OMA:GAFLHGC PhylomeDB:Q9ZQ74
ProtClustDB:CLSN2683830 Genevestigator:Q9ZQ74 Uniprot:Q9ZQ74
Length = 689
Score = 142 (55.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 25/68 (36%), Positives = 44/68 (64%)
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
+PN STF +++ACG G V+EG ++F S+ +DY+ P+ +H+ +VD+ R ++ +A
Sbjct: 543 KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQAL 602
Query: 122 EFIRNMQI 129
+ I M I
Sbjct: 603 DIIEKMPI 610
Score = 49 (22.3 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPN-WSTFV 69
V AL + K+K + I + I +L+ C ++ LE G+ ++ W T V
Sbjct: 324 VNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNV 379
>TAIR|locus:2100392 [details] [associations]
symbol:AT3G47840 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL049746 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00525955 PIR:T07723 RefSeq:NP_190368.1 UniGene:At.53826
ProteinModelPortal:Q9STS9 SMR:Q9STS9 PaxDb:Q9STS9 PRIDE:Q9STS9
EnsemblPlants:AT3G47840.1 GeneID:823940 KEGG:ath:AT3G47840
GeneFarm:3701 TAIR:At3g47840 eggNOG:NOG249488 InParanoid:Q9STS9
OMA:IKEPGWS PhylomeDB:Q9STS9 ProtClustDB:CLSN2684004
Genevestigator:Q9STS9 Uniprot:Q9STS9
Length = 706
Score = 151 (58.2 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 35/95 (36%), Positives = 50/95 (52%)
Query: 48 KLLEAGKRFEND---GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF 104
K EA FE G RP+ TF+ V+TAC G +D GF +F + Y++ P EH+
Sbjct: 492 KSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHY 551
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+VDL R ++++A + I M VVW TL
Sbjct: 552 GCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTL 586
>TAIR|locus:2045580 [details] [associations]
symbol:AT2G42920 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC006580 EMBL:AC006931 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AK229283
IPI:IPI00518122 PIR:H84859 RefSeq:NP_181820.1 UniGene:At.73075
ProteinModelPortal:Q9SJG6 SMR:Q9SJG6 PaxDb:Q9SJG6 PRIDE:Q9SJG6
EnsemblPlants:AT2G42920.1 GeneID:818893 KEGG:ath:AT2G42920
GeneFarm:3678 TAIR:At2g42920 eggNOG:NOG237883 InParanoid:Q9SJG6
OMA:NYAYLVF PhylomeDB:Q9SJG6 ProtClustDB:CLSN2683945
Genevestigator:Q9SJG6 Uniprot:Q9SJG6
Length = 559
Score = 149 (57.5 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 29/103 (28%), Positives = 55/103 (53%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
I+ L N + + ++ E G+ P+ +F+GV+TAC G V + F + Y
Sbjct: 331 ILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYM 390
Query: 97 INPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
I P+++H+ +V++ G + EA I+NM ++ +V+W +L
Sbjct: 391 IEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSL 433
>TAIR|locus:2093920 [details] [associations]
symbol:AT3G15930 "AT3G15930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000237569 eggNOG:NOG235387 EMBL:AB026653 IPI:IPI00541778
RefSeq:NP_188214.1 UniGene:At.53331 ProteinModelPortal:Q9LSB8
SMR:Q9LSB8 EnsemblPlants:AT3G15930.1 GeneID:820836
KEGG:ath:AT3G15930 GeneFarm:3861 TAIR:At3g15930 InParanoid:Q9LSB8
OMA:DEFTMVS PhylomeDB:Q9LSB8 Genevestigator:Q9LSB8 Uniprot:Q9LSB8
Length = 687
Score = 149 (57.5 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 30/103 (29%), Positives = 59/103 (57%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
++ L N + ++ + ++ ++P+ T++GV++AC G VD+ + F + D+
Sbjct: 441 VVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHR 500
Query: 97 INPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
I P+L H+ +VD+ GR + EA E +R M ++ +S+VW L
Sbjct: 501 IEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGAL 543
>TAIR|locus:2012858 [details] [associations]
symbol:AT1G10330 "AT1G10330" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC005489 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00522935 PIR:D86237 RefSeq:NP_172504.1
UniGene:At.51552 ProteinModelPortal:Q9SY75 SMR:Q9SY75 PRIDE:Q9SY75
EnsemblPlants:AT1G10330.1 GeneID:837572 KEGG:ath:AT1G10330
GeneFarm:3635 TAIR:At1g10330 eggNOG:NOG261194 InParanoid:Q9SY75
OMA:CTWNALL PhylomeDB:Q9SY75 ProtClustDB:CLSN2679569
Genevestigator:Q9SY75 Uniprot:Q9SY75
Length = 467
Score = 146 (56.5 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 35/122 (28%), Positives = 64/122 (52%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
+++ AL + D++++ + + I L + + LE + ++ V PN T + ++T
Sbjct: 273 DLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILT 332
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
AC VD G Q F S+ +Y I PT EH+ +VDL GR + +A FI+++ + +
Sbjct: 333 ACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDA 392
Query: 134 VV 135
V
Sbjct: 393 SV 394
>TAIR|locus:2020703 [details] [associations]
symbol:AT1G03540 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
EMBL:AC002560 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:DQ446225 IPI:IPI00544838
PIR:T00904 RefSeq:NP_171853.1 UniGene:At.51470
ProteinModelPortal:Q9LR69 SMR:Q9LR69 PRIDE:Q9LR69
EnsemblPlants:AT1G03540.1 GeneID:839466 KEGG:ath:AT1G03540
GeneFarm:3641 TAIR:At1g03540 eggNOG:NOG295682 HOGENOM:HOG000241954
InParanoid:Q9LR69 OMA:LGGYCQN PhylomeDB:Q9LR69
ProtClustDB:CLSN2679681 Genevestigator:Q9LR69 Uniprot:Q9LR69
Length = 609
Score = 147 (56.8 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 51 EAGKRFEND----GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
E F ND G++P++ +F+ ++TACG G VDEG +F + + Y I P EH+
Sbjct: 445 EEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSC 504
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
++DL GR EA + + + +W L
Sbjct: 505 MIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537
>TAIR|locus:2006927 [details] [associations]
symbol:AT1G33350 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 EMBL:AC051630 PROSITE:PS51375 EMBL:AC027035
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK118395 EMBL:AK222040 EMBL:BT005240 IPI:IPI00522025
PIR:C86457 RefSeq:NP_174603.1 UniGene:At.24521
ProteinModelPortal:Q9C501 SMR:Q9C501 PRIDE:Q9C501
EnsemblPlants:AT1G33350.1 GeneID:840229 KEGG:ath:AT1G33350
GeneFarm:3606 TAIR:At1g33350 eggNOG:NOG296254 InParanoid:Q9C501
OMA:LLNACTH PhylomeDB:Q9C501 ProtClustDB:CLSN2679262
Genevestigator:Q9C501 Uniprot:Q9C501
Length = 538
Score = 146 (56.5 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 28/82 (34%), Positives = 49/82 (59%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
ND ++P+ TF+G++ AC G V +G +F+ +T + I P +EH+ ++DL GR +
Sbjct: 358 ND-IKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRF 416
Query: 118 AEAREFIRNMQIDASSVVWETL 139
EA E + M++ A +W +L
Sbjct: 417 DEALEVMSTMKMKADEAIWGSL 438
>TAIR|locus:2195296 [details] [associations]
symbol:AT1G09190 "AT1G09190" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC003114 Pfam:PF01535 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569
EMBL:BT003981 IPI:IPI00534482 PIR:E86224 RefSeq:NP_172391.2
UniGene:At.42236 ProteinModelPortal:O80488
EnsemblPlants:AT1G09190.1 GeneID:837439 KEGG:ath:AT1G09190
GeneFarm:3632 TAIR:At1g09190 eggNOG:NOG278020 InParanoid:O80488
OMA:YNTLITA PhylomeDB:O80488 ProtClustDB:CLSN2708431
Genevestigator:O80488 Uniprot:O80488
Length = 484
Score = 144 (55.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
E V PN +TF+GV+ C G V+ G + F + + + EH+ +VDL R +
Sbjct: 329 EEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGR 388
Query: 117 IAEAREFIRNMQIDASSVVWETL 139
I EA +F++NM ++A++ +W +L
Sbjct: 389 ITEAFKFLKNMPVNANAAMWGSL 411
>TAIR|locus:2088827 [details] [associations]
symbol:AT3G26540 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AB028611 Pfam:PF13041 IPI:IPI00519926
RefSeq:NP_189286.1 UniGene:At.65162 ProteinModelPortal:Q9LRV2
SMR:Q9LRV2 PRIDE:Q9LRV2 EnsemblPlants:AT3G26540.1 GeneID:822262
KEGG:ath:AT3G26540 GeneFarm:4287 TAIR:At3g26540 eggNOG:NOG262114
HOGENOM:HOG000083802 InParanoid:Q9LRV2 OMA:ECMIELL PhylomeDB:Q9LRV2
ProtClustDB:CLSN2684861 Genevestigator:Q9LRV2 Uniprot:Q9LRV2
Length = 700
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 28/74 (37%), Positives = 48/74 (64%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
EN+GV+P+ TF+G++ AC G V+ GFQ+F S++ Y I+P +EH+ +++LY +
Sbjct: 589 ENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGC 648
Query: 117 IAEAREFIRNMQID 130
+ + EF+ M D
Sbjct: 649 LHQLEEFLLLMPFD 662
>TAIR|locus:2057986 [details] [associations]
symbol:AT2G36980 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC006922 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 EMBL:AY461626 EMBL:AY461627 IPI:IPI00523229 PIR:A84787
RefSeq:NP_181235.1 UniGene:At.37481 ProteinModelPortal:Q9SJK9
SMR:Q9SJK9 EnsemblPlants:AT2G36980.1 GeneID:818272
KEGG:ath:AT2G36980 GeneFarm:3671 TAIR:At2g36980 eggNOG:NOG289031
HOGENOM:HOG000243248 InParanoid:Q9SJK9 OMA:LTQVSWN PhylomeDB:Q9SJK9
ProtClustDB:CLSN2683956 ArrayExpress:Q9SJK9 Genevestigator:Q9SJK9
Uniprot:Q9SJK9
Length = 625
Score = 145 (56.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 33/96 (34%), Positives = 58/96 (60%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+A K ++N G++P+ TF+G++T C G V+EG FES+ +DY I ++H +
Sbjct: 421 QALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCM 480
Query: 108 VDLYGRLQKIAEAREFIR---NMQIDASS-VVWETL 139
+D++GR +AEA++ ++ D+S+ WETL
Sbjct: 481 IDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETL 516
>TAIR|locus:2085874 [details] [associations]
symbol:MEF20 "AT3G18970" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0080156 "mitochondrial mRNA
modification" evidence=IMP] InterPro:IPR002885 GO:GO:0005739
EMBL:CP002686 GenomeReviews:BA000014_GR PROSITE:PS51375
EMBL:AP000735 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
GO:GO:0080156 HOGENOM:HOG000237569 EMBL:BT030396 IPI:IPI00537312
RefSeq:NP_188527.2 UniGene:At.34404 UniGene:At.49634
UniGene:At.66475 ProteinModelPortal:Q9LJ69 PaxDb:Q9LJ69
PRIDE:Q9LJ69 EnsemblPlants:AT3G18970.1 GeneID:821430
KEGG:ath:AT3G18970 GeneFarm:3865 TAIR:At3g18970 eggNOG:NOG262540
InParanoid:Q9LJ69 OMA:PTDTTMV PhylomeDB:Q9LJ69
ProtClustDB:CLSN2680846 Genevestigator:Q9LJ69 Uniprot:Q9LJ69
Length = 472
Score = 143 (55.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/85 (34%), Positives = 49/85 (57%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
R G++PN TF +++A G V+EG + F+S+ + + P +EH+ IVDL G+
Sbjct: 313 RMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKA 372
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
+I EA +FI M I +++ +L
Sbjct: 373 GRIQEAYQFILAMPIKPDAILLRSL 397
>TAIR|locus:2175653 [details] [associations]
symbol:AT5G39350 "AT5G39350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB009054 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00525121 RefSeq:NP_198751.1
UniGene:At.55251 ProteinModelPortal:Q9FLZ9 SMR:Q9FLZ9
EnsemblPlants:AT5G39350.1 GeneID:833931 KEGG:ath:AT5G39350
GeneFarm:4040 TAIR:At5g39350 eggNOG:NOG328150 InParanoid:Q9FLZ9
OMA:LLAMYMN PhylomeDB:Q9FLZ9 ProtClustDB:CLSN2687317
Genevestigator:Q9FLZ9 Uniprot:Q9FLZ9
Length = 677
Score = 124 (48.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 28/80 (35%), Positives = 37/80 (46%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV PN TF + AC G V+EG F + Y H+ IVDL GR ++ E
Sbjct: 520 GVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDE 579
Query: 120 AREFIRNMQIDASSVVWETL 139
A I + + +S VW L
Sbjct: 580 AYNLITTIPFEPTSTVWGAL 599
Score = 63 (27.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK 54
N+ + R + AL + D + N + LD I+ +L VC LK LE G+
Sbjct: 187 NTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR 238
Score = 45 (20.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
+V+ ALE+ ++ G+ ++ I L++VC D + GK VR
Sbjct: 299 DVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR 347
>TAIR|locus:2057630 [details] [associations]
symbol:AT2G33680 "AT2G33680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:U78721 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 HOGENOM:HOG000237570
IPI:IPI00531746 PIR:C84748 RefSeq:NP_180924.1 UniGene:At.66302
ProteinModelPortal:P93005 SMR:P93005 EnsemblPlants:AT2G33680.1
GeneID:817933 KEGG:ath:AT2G33680 GeneFarm:3665 TAIR:At2g33680
eggNOG:NOG291314 InParanoid:P93005 OMA:NSITWSA PhylomeDB:P93005
ProtClustDB:CLSN2683505 Genevestigator:P93005 Uniprot:P93005
Length = 727
Score = 145 (56.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 31/92 (33%), Positives = 53/92 (57%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA + FE +G+ P+ TFV +I+AC G V+ G+ +F ++ ++P ++H+ +
Sbjct: 507 EALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACM 566
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
VDL R ++ EA+EFI + ID +W L
Sbjct: 567 VDLLSRAGQLKEAKEFIESANIDHGLCLWRIL 598
>TAIR|locus:2011892 [details] [associations]
symbol:AT1G50270 "AT1G50270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0007059 "chromosome segregation" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009888 "tissue development" evidence=RCA]
[GO:0010638 "positive regulation of organelle organization"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
EMBL:AC007980 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AK229256
IPI:IPI00525612 PIR:A96539 RefSeq:NP_175445.1 UniGene:At.23103
UniGene:At.68562 ProteinModelPortal:Q9SX45 PRIDE:Q9SX45
EnsemblPlants:AT1G50270.1 GeneID:841449 KEGG:ath:AT1G50270
GeneFarm:3610 TAIR:At1g50270 eggNOG:NOG310185 InParanoid:Q9SX45
OMA:HEFIAFD ProtClustDB:CLSN2682713 Genevestigator:Q9SX45
Uniprot:Q9SX45
Length = 596
Score = 143 (55.4 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V PN TF+ V++AC G V+EG + F S+ +++ P +H+ +VDL+GR + EA
Sbjct: 403 VSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEA 462
Query: 121 REFIRNMQIDASSVVWETL 139
+ I M ++ ++VVW L
Sbjct: 463 KALIERMPMEPTNVVWGAL 481
>TAIR|locus:2122634 [details] [associations]
symbol:OTP70 "AT4G25270" species:3702 "Arabidopsis
thaliana" [GO:0008380 "RNA splicing" evidence=IMP] [GO:0009451 "RNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008380
EMBL:AL161563 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AL035396 Pfam:PF13041 IPI:IPI00521833
PIR:T05548 RefSeq:NP_194257.1 UniGene:At.32276
ProteinModelPortal:Q9SB36 SMR:Q9SB36 EnsemblPlants:AT4G25270.1
GeneID:828630 KEGG:ath:AT4G25270 GeneFarm:4021 TAIR:At4g25270
eggNOG:NOG269307 HOGENOM:HOG000006216 InParanoid:Q9SB36 OMA:EHNFELL
PhylomeDB:Q9SB36 ProtClustDB:CLSN2685667 Genevestigator:Q9SB36
Uniprot:Q9SB36
Length = 527
Score = 140 (54.3 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
+P+ TFV V++ C G V++G + F ++++Y I+P +EH+ +V+LYGR + EA
Sbjct: 388 KPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAY 447
Query: 122 EFI-RNMQIDASSVVWETL 139
I + M ++A VW L
Sbjct: 448 SMIVQEMGLEAGPTVWGAL 466
>TAIR|locus:2148393 [details] [associations]
symbol:AT5G59600 "AT5G59600" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB025604 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB006705
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:BT023730 IPI:IPI00528168
RefSeq:NP_200768.1 UniGene:At.29216 UniGene:At.75622
ProteinModelPortal:Q9FGR2 SMR:Q9FGR2 EnsemblPlants:AT5G59600.1
GeneID:836079 KEGG:ath:AT5G59600 GeneFarm:4200 TAIR:At5g59600
eggNOG:NOG312104 InParanoid:Q9FGR2 OMA:DLFVWGA
ProtClustDB:CLSN2686476 Genevestigator:Q9FGR2 Uniprot:Q9FGR2
Length = 534
Score = 140 (54.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 33/92 (35%), Positives = 47/92 (51%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K +E + E G + + TF ++TAC G D G F + Y I P LEH+ +
Sbjct: 372 KAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACM 431
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
VDL GR K+ EA E I+ M+++ VW L
Sbjct: 432 VDLLGRAGKLVEAYEMIKAMRMEPDLFVWGAL 463
>TAIR|locus:2041198 [details] [associations]
symbol:SLO1 "SLOW GROWTH 1" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC006592 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AY064984 IPI:IPI00525356
PIR:C84612 RefSeq:NP_179827.1 UniGene:At.28296
ProteinModelPortal:Q9SJZ3 SMR:Q9SJZ3 PRIDE:Q9SJZ3
EnsemblPlants:AT2G22410.1 GeneID:816772 KEGG:ath:AT2G22410
GeneFarm:3692 TAIR:At2g22410 eggNOG:NOG314086 InParanoid:Q9SJZ3
OMA:HCLSACS PhylomeDB:Q9SJZ3 ProtClustDB:CLSN2683739
Genevestigator:Q9SJZ3 Uniprot:Q9SJZ3
Length = 681
Score = 141 (54.7 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ P+ TF+G+++AC G + G +F + +++NP L+H+ +VDL GR + E
Sbjct: 485 GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEE 544
Query: 120 AREFIRNMQIDASSVVWETL 139
A + +M ++A + VW L
Sbjct: 545 ADRLMESMPMEADAAVWGAL 564
>TAIR|locus:2027589 [details] [associations]
symbol:PGN "AT1G56570" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009749 "response to glucose stimulus"
evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009737 GO:GO:0050832
GO:GO:0009651 GO:GO:0009749 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC009323 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00545852 PIR:D96607 RefSeq:NP_176050.1
UniGene:At.52235 ProteinModelPortal:Q9FXA9 SMR:Q9FXA9
EnsemblPlants:AT1G56570.1 GeneID:842111 KEGG:ath:AT1G56570
GeneFarm:3622 TAIR:At1g56570 eggNOG:NOG305919 InParanoid:Q9FXA9
OMA:LMDMYAT PhylomeDB:Q9FXA9 ProtClustDB:CLSN2682898
Genevestigator:Q9FXA9 Uniprot:Q9FXA9
Length = 611
Score = 140 (54.3 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
+E + + G+RP+ F+ V++AC G V++G ++F + +Y INP + + +VD
Sbjct: 400 VELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVD 459
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVW 136
L GR KI EA E + M W
Sbjct: 460 LLGRAGKIGEAYELVERMPFKPDESTW 486
>TAIR|locus:2007116 [details] [associations]
symbol:AT1G69350 "AT1G69350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC018364 EMBL:AC073178 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00543418
RefSeq:NP_564961.1 UniGene:At.52447 ProteinModelPortal:Q9C507
SMR:Q9C507 PaxDb:Q9C507 PRIDE:Q9C507 EnsemblPlants:AT1G69350.1
GeneID:843267 KEGG:ath:AT1G69350 GeneFarm:3625 TAIR:At1g69350
eggNOG:NOG266087 HOGENOM:HOG000115616 InParanoid:Q9C507 OMA:SSEHFAC
PhylomeDB:Q9C507 Genevestigator:Q9C507 Uniprot:Q9C507
Length = 787
Score = 140 (54.3 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G +PN F+ V++ACG G+V+EG +F ++ + + ++P EHF +DL R + E
Sbjct: 600 GTKPNEVVFMNVLSACGHSGSVEEGKYYF-NLMKSFGVSPNSEHFACFIDLLSRSGDLKE 658
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTXXXXXXXXXXXXXXXXNKKKDAGYMPYTEYVLRD 179
A I+ M A + VW +L + D GY YT +L +
Sbjct: 659 AYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGY--YT--LLSN 714
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRT-LRIKKNL---------RI-CGECHNFIK 228
+ E E + +R R A+ + PG + + I + + RI E + F+
Sbjct: 715 IYAEEGEWEE-FRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLG 773
Query: 229 KLSSIENREIIV 240
L ++ N E +V
Sbjct: 774 NLQNLTNEEHVV 785
>TAIR|locus:2089591 [details] [associations]
symbol:AT3G14730 "AT3G14730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AB023038
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00531281
RefSeq:NP_188091.1 UniGene:At.65089 ProteinModelPortal:Q9LUC2
SMR:Q9LUC2 PRIDE:Q9LUC2 EnsemblPlants:AT3G14730.1 GeneID:820701
KEGG:ath:AT3G14730 GeneFarm:3860 TAIR:At3g14730 eggNOG:NOG247744
InParanoid:Q9LUC2 OMA:REIHGYM PhylomeDB:Q9LUC2
ProtClustDB:CLSN2684945 Genevestigator:Q9LUC2 Uniprot:Q9LUC2
Length = 653
Score = 139 (54.0 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV+P+ TFVG++ AC G ++EG + Y+I PT +H+ ++D+ GR K+ E
Sbjct: 463 GVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEE 522
Query: 120 AREFIRNMQIDASSVVWETL 139
A E + I + VVW ++
Sbjct: 523 AYELAISKPICDNPVVWRSI 542
>TAIR|locus:2076456 [details] [associations]
symbol:AT3G58590 "AT3G58590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL137082 Pfam:PF13041
EMBL:AK229655 IPI:IPI00544751 PIR:T45679 RefSeq:NP_191418.2
UniGene:At.43654 UniGene:At.48781 ProteinModelPortal:Q0WN01
SMR:Q0WN01 PRIDE:Q0WN01 EnsemblPlants:AT3G58590.1 GeneID:825028
KEGG:ath:AT3G58590 TAIR:At3g58590 eggNOG:NOG289005
HOGENOM:HOG000238280 InParanoid:Q9M2F7 OMA:LITWTAL PhylomeDB:Q0WN01
ProtClustDB:CLSN2680448 Genevestigator:Q0WN01 Uniprot:Q0WN01
Length = 741
Score = 139 (54.0 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 31/89 (34%), Positives = 47/89 (52%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE K + G +P+ +F+ ++TAC G V EG F+ + +DY + P ++H+ VD
Sbjct: 632 LEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVD 690
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWET 138
L R + EA IR M A + VW T
Sbjct: 691 LLARNGYLKEAEHLIREMPFPADAPVWRT 719
>TAIR|locus:2084963 [details] [associations]
symbol:AT3G04750 "AT3G04750" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC011437 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00519828
RefSeq:NP_187126.1 UniGene:At.53184 ProteinModelPortal:Q9SR01
SMR:Q9SR01 PaxDb:Q9SR01 PRIDE:Q9SR01 EnsemblPlants:AT3G04750.1
GeneID:819635 KEGG:ath:AT3G04750 GeneFarm:3697 TAIR:At3g04750
eggNOG:NOG261705 InParanoid:Q9SR01 OMA:SRSIWGS PhylomeDB:Q9SR01
ProtClustDB:CLSN2684293 Genevestigator:Q9SR01 Uniprot:Q9SR01
Length = 661
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
R + +GV PN T + V+TAC G V+EG F + + +P EH+ +VDL R
Sbjct: 459 RMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRA 518
Query: 115 QKIAEAREFI-RNMQIDASSVVWETL 139
++ EA++ + + M + S +W ++
Sbjct: 519 GRVEEAKDIVQKKMPMRPSQSMWGSI 544
>TAIR|locus:2058812 [details] [associations]
symbol:AT2G02750 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC002521 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:DQ446457 EMBL:DQ652951 EMBL:BX821054
IPI:IPI00516808 PIR:T00853 RefSeq:NP_178378.1 UniGene:At.41460
UniGene:At.66386 ProteinModelPortal:Q1PFA6 SMR:Q1PFA6 PaxDb:Q1PFA6
PRIDE:Q1PFA6 EnsemblPlants:AT2G02750.1 GeneID:814804
KEGG:ath:AT2G02750 GeneFarm:3689 TAIR:At2g02750 eggNOG:NOG237882
HOGENOM:HOG000115618 InParanoid:A0MEI0 OMA:PDSATWN PhylomeDB:Q1PFA6
ProtClustDB:CLSN2683701 Genevestigator:Q1PFA6 Uniprot:Q1PFA6
Length = 613
Score = 134 (52.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 29/85 (34%), Positives = 47/85 (55%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
+E + + V P+ +TF V++AC G V++G Q F + +Y P+ EH ++D
Sbjct: 456 IEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMID 515
Query: 110 LYGRLQKIAEAREFIRNMQIDASSV 134
L GR ++ EA+E I M +SSV
Sbjct: 516 LLGRSGRLREAKEVIDQMSEPSSSV 540
>TAIR|locus:2151694 [details] [associations]
symbol:AT5G37570 "AT5G37570" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB018107 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00533371 RefSeq:NP_198573.1
UniGene:At.65593 ProteinModelPortal:Q9FHR3 SMR:Q9FHR3
EnsemblPlants:AT5G37570.1 GeneID:833735 KEGG:ath:AT5G37570
GeneFarm:4038 TAIR:At5g37570 eggNOG:NOG280404 InParanoid:Q9FHR3
OMA:LIDMNAK PhylomeDB:Q9FHR3 ProtClustDB:CLSN2686926
Genevestigator:Q9FHR3 Uniprot:Q9FHR3
Length = 550
Score = 133 (51.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 30/92 (32%), Positives = 52/92 (56%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA + FE ++G+ P+ F ++ CG V+EG ++FE + + Y I + +H+ I
Sbjct: 389 EAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCI 448
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
V+L R K+ EA E I++M +A + W +L
Sbjct: 449 VNLLSRTGKLKEAYELIKSMPFEAHASAWGSL 480
>TAIR|locus:2047017 [details] [associations]
symbol:AT2G21090 "AT2G21090" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC006264
Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:BX820424
IPI:IPI00532746 PIR:A84597 RefSeq:NP_179705.1 UniGene:At.49547
ProteinModelPortal:Q9SKQ4 SMR:Q9SKQ4 STRING:Q9SKQ4
EnsemblPlants:AT2G21090.1 GeneID:816644 KEGG:ath:AT2G21090
GeneFarm:3691 TAIR:At2g21090 eggNOG:NOG309199 InParanoid:Q9SKQ4
OMA:FSSCLCA PhylomeDB:Q9SKQ4 ProtClustDB:CLSN2683569
Genevestigator:Q9SKQ4 Uniprot:Q9SKQ4
Length = 597
Score = 133 (51.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
L++L+ +F V+PN +T V ++ AC G V+EG + FES+T + I P EH+
Sbjct: 398 LRMLDDMIKFR---VQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYAC 454
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
++DL GR E I M + +W +
Sbjct: 455 LIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAI 487
>TAIR|locus:2007888 [details] [associations]
symbol:AT1G17630 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC022492 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00541865 RefSeq:NP_173207.1 UniGene:At.51653
ProteinModelPortal:Q9LNP2 SMR:Q9LNP2 PaxDb:Q9LNP2 PRIDE:Q9LNP2
EnsemblPlants:AT1G17630.1 GeneID:838340 KEGG:ath:AT1G17630
GeneFarm:3636 TAIR:At1g17630 eggNOG:NOG260559 InParanoid:Q9LNP2
OMA:REIHGHV PhylomeDB:Q9LNP2 ProtClustDB:CLSN2682102
Genevestigator:Q9LNP2 Uniprot:Q9LNP2
Length = 731
Score = 134 (52.2 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L R + G P+ V V++AC G V++G + F S+++ + + P EH+ I
Sbjct: 518 KALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACI 577
Query: 108 VDLYGRLQKIAEAREFIRNMQID 130
VDL GR+ + EA E ++NM ++
Sbjct: 578 VDLLGRVGFLKEASEIVKNMPME 600
Score = 38 (18.4 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 9/39 (23%), Positives = 21/39 (53%)
Query: 13 REVKAALEVMDKLKNIGIFLDSPDIIELLNVCM--DLKL 49
R A ++ +G+ LD+ ++ E +++ + DL+L
Sbjct: 87 RSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRL 125
>TAIR|locus:2095289 [details] [associations]
symbol:AT3G09040 "AT3G09040" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC009326
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00542229
RefSeq:NP_187516.1 UniGene:At.40178 ProteinModelPortal:Q9SS83
SMR:Q9SS83 PRIDE:Q9SS83 EnsemblPlants:AT3G09040.1 GeneID:820057
KEGG:ath:AT3G09040 GeneFarm:3706 TAIR:At3g09040 eggNOG:NOG256475
InParanoid:Q9SS83 OMA:CRIHGDD PhylomeDB:Q9SS83
ProtClustDB:CLSN2684968 Genevestigator:Q9SS83 Uniprot:Q9SS83
Length = 1028
Score = 128 (50.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+ P+ TF+GV+TAC G V +G + FE + Y I ++H +VDL GR + EA
Sbjct: 830 IMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEA 889
Query: 121 REFIRNMQIDASSVVWETL 139
+FI + + +W +L
Sbjct: 890 DDFIEAQNLKPDARLWSSL 908
Score = 48 (22.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK 54
AL+ ++++ G+ D + +L VC L L G+
Sbjct: 716 ALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752
Score = 36 (17.7 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 10/53 (18%), Positives = 21/53 (39%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR 55
N+ + ++ A ++ ++ GI D + L C + L GK+
Sbjct: 498 NTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550
>TAIR|locus:2095487 [details] [associations]
symbol:AT3G28660 "AT3G28660" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AP000420 EMBL:AY091065 EMBL:BT000982 IPI:IPI00548848
RefSeq:NP_189507.2 UniGene:At.42756 ProteinModelPortal:Q9LJI9
SMR:Q9LJI9 EnsemblPlants:AT3G28660.1 GeneID:822496
KEGG:ath:AT3G28660 GeneFarm:3695 TAIR:At3g28660 eggNOG:NOG252175
InParanoid:Q9LJI9 PhylomeDB:Q9LJI9 ProtClustDB:CLSN2685236
Genevestigator:Q9LJI9 Uniprot:Q9LJI9
Length = 504
Score = 131 (51.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 37/126 (29%), Positives = 59/126 (46%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEN-DGVRPNWSTFVGVIT 73
++ A+EV +KL +F + I K R E DG++P+ +GV+
Sbjct: 270 IETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLA 329
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
AC G ++EG E++ Y I P EH+ IVDL R ++ +A + I M + +
Sbjct: 330 ACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLA 389
Query: 134 VVWETL 139
VW L
Sbjct: 390 SVWGAL 395
>TAIR|locus:2206164 [details] [associations]
symbol:AT1G31430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AC027135 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00518213 PIR:C86440 RefSeq:NP_174428.1
UniGene:At.40342 UniGene:At.5353 ProteinModelPortal:Q9C866
SMR:Q9C866 PaxDb:Q9C866 EnsemblPlants:AT1G31430.1 GeneID:840033
KEGG:ath:AT1G31430 GeneFarm:3605 TAIR:At1g31430 eggNOG:NOG280522
InParanoid:Q9C866 OMA:NGYVQFN PhylomeDB:Q9C866
ProtClustDB:CLSN2682384 Genevestigator:Q9C866 Uniprot:Q9C866
Length = 570
Score = 131 (51.2 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 39/114 (34%), Positives = 57/114 (50%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
++ ALEV ++K + I L M + L+ EN GVR + TFV V+TA
Sbjct: 330 IETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA 389
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQ 128
C G V EG + F S+T +++ P EH ++DL R + EA E I M+
Sbjct: 390 CNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMR 443
>TAIR|locus:2121055 [details] [associations]
symbol:AT4G38010 "AT4G38010" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161592 PROSITE:PS51375
EMBL:AL035538 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00533264 PIR:T05628
RefSeq:NP_195514.1 UniGene:At.65469 ProteinModelPortal:Q9SZK1
SMR:Q9SZK1 PRIDE:Q9SZK1 EnsemblPlants:AT4G38010.1 GeneID:829957
KEGG:ath:AT4G38010 GeneFarm:4024 TAIR:At4g38010 eggNOG:NOG236748
InParanoid:Q9SZK1 OMA:DYGRWVH PhylomeDB:Q9SZK1
ProtClustDB:CLSN2685374 Genevestigator:Q9SZK1 Uniprot:Q9SZK1
Length = 559
Score = 130 (50.8 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 33/116 (28%), Positives = 62/116 (53%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
++ ALE+ + +++ +F + + L L+ L + G +PN TF+ + A
Sbjct: 357 IETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNA 416
Query: 75 CGCFGAVDEGFQHFESV-TRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQI 129
C G VDEG ++F + +R+Y++ P LEH+ ++DL R + EA E ++ M +
Sbjct: 417 CCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPV 472
>TAIR|locus:2159238 [details] [associations]
symbol:AT5G61800 "AT5G61800" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB010069 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00520201
RefSeq:NP_200988.1 UniGene:At.49205 ProteinModelPortal:Q9FLS9
SMR:Q9FLS9 EnsemblPlants:AT5G61800.1 GeneID:836302
KEGG:ath:AT5G61800 GeneFarm:4201 TAIR:At5g61800 eggNOG:NOG315848
InParanoid:Q9FLS9 OMA:VYSAMAG PhylomeDB:Q9FLS9
ProtClustDB:CLSN2686946 Genevestigator:Q9FLS9 Uniprot:Q9FLS9
Length = 499
Score = 129 (50.5 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
++ + G++P+ TF+ V+ C G VDE F+ + YD+N ++H+ + DL GR
Sbjct: 339 RKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGR 398
Query: 114 LQKIAEAREFIRNMQIDASS 133
I EA E I M D +
Sbjct: 399 AGLIEEAAEMIEQMPKDGGN 418
>TAIR|locus:2134842 [details] [associations]
symbol:AT4G04370 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL161500 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AF069441
IPI:IPI00531168 PIR:C85055 RefSeq:NP_192346.1 UniGene:At.66630
UniGene:At.70894 UniGene:At.74904 ProteinModelPortal:Q9XE98
SMR:Q9XE98 EnsemblPlants:AT4G04370.1 GeneID:825757
KEGG:ath:AT4G04370 GeneFarm:4029 TAIR:At4g04370 eggNOG:NOG258182
HOGENOM:HOG000115634 InParanoid:Q9XE98 OMA:PDQQTFG PhylomeDB:Q9XE98
ProtClustDB:CLSN2685339 Genevestigator:Q9XE98 Uniprot:Q9XE98
Length = 729
Score = 131 (51.2 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE F + G+ PN F+ V+++C G V +G + F S+ RD+ + P EH +VD
Sbjct: 534 LEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVD 593
Query: 110 LYGRLQKIAEAREFIR 125
L R ++I +A +F +
Sbjct: 594 LLCRAKRIEDAFKFYK 609
Score = 38 (18.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 32 LDSPDIIELLNVCMDLKLLEAGK 54
+DS ++ LL C L GK
Sbjct: 446 VDSFTVVSLLQACSSAGALPVGK 468
>TAIR|locus:2089333 [details] [associations]
symbol:AT3G16610 "AT3G16610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006302 "double-strand break repair" evidence=RCA]
[GO:0006312 "mitotic recombination" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 EMBL:AB022217
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00549054 RefSeq:NP_188283.1 UniGene:At.38870
UniGene:At.66463 ProteinModelPortal:Q9LUS3 SMR:Q9LUS3 PaxDb:Q9LUS3
PRIDE:Q9LUS3 EnsemblPlants:AT3G16610.1 GeneID:820912
KEGG:ath:AT3G16610 GeneFarm:4237 TAIR:At3g16610 eggNOG:NOG326174
InParanoid:Q9LUS3 OMA:KNEVTWS PhylomeDB:Q9LUS3
ProtClustDB:CLSN2913360 Genevestigator:Q9LUS3 Uniprot:Q9LUS3
Length = 654
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTR-DYDINPTLEHFLGIVDLYGRLQ 115
+ GV P+ T + +++AC G VDEG Q F S++R D+++ P ++H+ + DL R
Sbjct: 502 QETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAG 561
Query: 116 KIAEAREFIRNMQIDASSVVWETL 139
+ EA +F+ M + V TL
Sbjct: 562 YLDEAYDFVNKMPFEPDIRVLGTL 585
>TAIR|locus:2039817 [details] [associations]
symbol:AT2G39620 "AT2G39620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC004218 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
IPI:IPI00546453 PIR:T00570 RefSeq:NP_181492.1 UniGene:At.66334
ProteinModelPortal:O80647 SMR:O80647 EnsemblPlants:AT2G39620.1
GeneID:818545 KEGG:ath:AT2G39620 GeneFarm:3675 TAIR:At2g39620
eggNOG:NOG285557 HOGENOM:HOG000115625 InParanoid:O80647 OMA:ATAVISM
PhylomeDB:O80647 ProtClustDB:CLSN2683357 Genevestigator:O80647
Uniprot:O80647
Length = 836
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
EN+ ++P+ +F+ V++AC G V+EG + FE + + I +EH+ +VDL G+
Sbjct: 698 ENE-LKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGL 756
Query: 117 IAEAREFIRNMQIDASSVVWETL 139
EA E +R M++ S VW L
Sbjct: 757 FGEAVEMMRRMRVKTSVGVWGAL 779
>TAIR|locus:2127801 [details] [associations]
symbol:AT4G32430 "AT4G32430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AL161581 EMBL:AL034567 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:BT006447 EMBL:AK227348
IPI:IPI00528564 PIR:T05353 RefSeq:NP_194969.2 UniGene:At.31663
ProteinModelPortal:Q84MA3 SMR:Q84MA3 PRIDE:Q84MA3
EnsemblPlants:AT4G32430.1 GeneID:829378 KEGG:ath:AT4G32430
GeneFarm:4023 TAIR:At4g32430 eggNOG:NOG280004 HOGENOM:HOG000242511
InParanoid:Q84MA3 OMA:ITMYAKF PhylomeDB:Q84MA3
ProtClustDB:CLSN2680228 Genevestigator:Q84MA3 Uniprot:Q84MA3
Length = 763
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+ V P+ TF+ V+TAC G VD+G++ F + Y++ P+ EH+ +VD+ GR ++
Sbjct: 569 ENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLK 628
Query: 119 EAREFI 124
EA E +
Sbjct: 629 EAEELM 634
>TAIR|locus:2018092 [details] [associations]
symbol:MEF9 "AT1G62260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0016554 "cytidine to uridine
editing" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0016554
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC000375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00546235 PIR:B96649 RefSeq:NP_176416.1
UniGene:At.66076 ProteinModelPortal:O04590 SMR:O04590 PaxDb:O04590
PRIDE:O04590 EnsemblPlants:AT1G62260.1 GeneID:842523
KEGG:ath:AT1G62260 GeneFarm:3623 TAIR:At1g62260 eggNOG:NOG295783
InParanoid:O04590 OMA:MPTHITF PhylomeDB:O04590
ProtClustDB:CLSN2682086 Genevestigator:O04590 Uniprot:O04590
Length = 656
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
+++G+ P+ TFV V+ AC G VDE F S+ Y I P +EH+ +V++ +
Sbjct: 502 KSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQ 561
Query: 117 IAEAREFIRNMQIDASSVVWETL 139
EA I +M + VW L
Sbjct: 562 FEEAMYIITSMPFEPDKTVWGAL 584
>TAIR|locus:2049726 [details] [associations]
symbol:AT2G37310 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
EMBL:AC005896 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AK230376
IPI:IPI00523165 PIR:B84791 RefSeq:NP_181268.1 UniGene:At.51341
ProteinModelPortal:Q9ZUT5 SMR:Q9ZUT5 PRIDE:Q9ZUT5
EnsemblPlants:AT2G37310.1 GeneID:818308 KEGG:ath:AT2G37310
GeneFarm:3673 TAIR:At2g37310 eggNOG:NOG272931 HOGENOM:HOG000090695
InParanoid:Q9ZUT5 OMA:AYGHLIQ PhylomeDB:Q9ZUT5
ProtClustDB:CLSN2683974 Genevestigator:Q9ZUT5 Uniprot:Q9ZUT5
Length = 657
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 50/178 (28%), Positives = 79/178 (44%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQH-FESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
G +P+ T V++A G D QH F+S+ YDI P +EH+ +V + R K++
Sbjct: 462 GTKPDDVTLTAVLSAFAHSGDSDMA-QHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLS 520
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTXXXXXXXXXXXXXXXXNKKKDAGYMPYTEYVLR 178
+A EFI M ID + VW L A + ++ G YT ++
Sbjct: 521 DAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGN--YT--IMA 576
Query: 179 DLDQEAK--EKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIE 234
+L +A E+ + R++ + GL P + +K LR +FI K SS E
Sbjct: 577 NLYTQAGRWEEAEMVRNKMKRI--GLKKIPGTSWIETEKGLR------SFIAKDSSCE 626
>TAIR|locus:2096299 [details] [associations]
symbol:AT3G05340 "AT3G05340" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC009177 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00546900 RefSeq:NP_187185.2
UniGene:At.49589 UniGene:At.65776 ProteinModelPortal:Q9MA85
SMR:Q9MA85 EnsemblPlants:AT3G05340.1 GeneID:819698
KEGG:ath:AT3G05340 GeneFarm:3700 TAIR:At3g05340 eggNOG:NOG237313
InParanoid:Q9MA85 OMA:FARHGHG PhylomeDB:Q9MA85
ProtClustDB:CLSN2680820 Genevestigator:Q9MA85 Uniprot:Q9MA85
Length = 658
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
LKL E E V+P TF+ ++ AC G +D+G + + + I P EH+
Sbjct: 443 LKLYEEMTTLE---VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTC 499
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
I+D+ GR + EA+ FI ++ + +W+ L
Sbjct: 500 IIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQAL 532
>TAIR|locus:2054966 [details] [associations]
symbol:AHG11 "ABA hypersensitive germination 11"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 EMBL:AC002388
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:DQ446623 IPI:IPI00525033
PIR:T00405 RefSeq:NP_182015.1 UniGene:At.65047
ProteinModelPortal:Q1PEU4 SMR:Q1PEU4 EnsemblPlants:AT2G44880.1
GeneID:819097 KEGG:ath:AT2G44880 GeneFarm:3679 TAIR:At2g44880
eggNOG:NOG250946 InParanoid:O22163 OMA:LCNSMIK PhylomeDB:Q1PEU4
ProtClustDB:CLSN2683321 Genevestigator:Q1PEU4 Uniprot:Q1PEU4
Length = 555
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
+P+ T + VITAC G V+EG + F V R+ +N +EH+ +VDL GR + EA
Sbjct: 371 KPDEITMLAVITACNHGGLVEEGRKWFH-VMREMGLNAKIEHYGCMVDLLGRAGSLKEAE 429
Query: 122 EFIRNMQIDASSVV 135
+ I NM + + ++
Sbjct: 430 DLITNMPFEPNGII 443
>TAIR|locus:2159582 [details] [associations]
symbol:SLG1 "AT5G08490" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0009414 "response to water
deprivation" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0080156 "mitochondrial mRNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0005739 GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009414 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AB006697 Pfam:PF13041 GO:GO:0080156
IPI:IPI00536602 RefSeq:NP_196466.1 UniGene:At.65496
ProteinModelPortal:Q9FNN9 SMR:Q9FNN9 EnsemblPlants:AT5G08490.1
GeneID:830748 KEGG:ath:AT5G08490 GeneFarm:4217 TAIR:At5g08490
eggNOG:NOG273377 HOGENOM:HOG000083164 InParanoid:Q9FNN9 OMA:PAGCSWI
PhylomeDB:Q9FNN9 ProtClustDB:CLSN2687297 Genevestigator:Q9FNN9
Uniprot:Q9FNN9
Length = 849
Score = 117 (46.2 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 22/85 (25%), Positives = 46/85 (54%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
++P+ ++TAC G + +G Q ++S+ + + PT+E + VDL R ++ +A
Sbjct: 664 IKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDA 723
Query: 121 REFIRNMQIDASSVVWETLEKYAQT 145
F+ M ++ ++ +W TL + T
Sbjct: 724 YSFVTQMPVEPNANIWGTLLRACTT 748
Score = 49 (22.3 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 19 LEVMDKLKNIGIFLDSPDIIELLNVCMDLK 48
L ++ L N I LDS I+ LL C++++
Sbjct: 417 LNLLHHLLNEAITLDSVTILSLLKFCINVQ 446
>TAIR|locus:2176927 [details] [associations]
symbol:AT5G52850 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 EMBL:AB009055 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 UniGene:At.29591 UniGene:At.66774
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00540501
RefSeq:NP_200097.1 ProteinModelPortal:Q9FLX6 SMR:Q9FLX6
EnsemblPlants:AT5G52850.1 GeneID:835362 KEGG:ath:AT5G52850
GeneFarm:3328 TAIR:At5g52850 eggNOG:NOG265214 InParanoid:Q9FLX6
OMA:NEFTFVK PhylomeDB:Q9FLX6 ProtClustDB:CLSN2686138
Genevestigator:Q9FLX6 Uniprot:Q9FLX6
Length = 893
Score = 123 (48.4 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 38/180 (21%), Positives = 79/180 (43%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L A + P+ TF+ +++AC D G ++F+ + + Y+I P +EH++ +V
Sbjct: 614 LSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVG 673
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTXXXXXXXXXXXXXXXXNKKKDAGY 169
+ GR ++ EA + M + ++++++TL + + D
Sbjct: 674 ILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSD--- 730
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKK 229
P +L DL E+ KP+ + R + +S G K + + G+ H+F+ +
Sbjct: 731 -PALYILLADLYDESG-KPELAQKTRNLMTEKRLSKKLG-----KSTVEVQGKVHSFVSE 783
Score = 100 (40.3 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 190 TYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
++ S + AV YG I P + + KN +C +CH F+ L+ + +++I VRD
Sbjct: 819 SFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRD 871
Score = 69 (29.3 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
G PN TF V+ +C + G + H + ++ N + L DLY + +
Sbjct: 119 GTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLS--DLYSKCGQFK 176
Query: 119 EAREFIRNMQIDASSVVW 136
EA E ++Q +A ++ W
Sbjct: 177 EACELFSSLQ-NADTISW 193
Score = 69 (29.3 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 31/136 (22%), Positives = 53/136 (38%)
Query: 4 SELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRP 63
S+L C + K A E+ L+N + I L+ + L+ GV P
Sbjct: 166 SDLYSKCGQ--FKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPP 223
Query: 64 NWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREF 123
N TFV ++ A G H + R +N L+ +VD Y + K+ +A
Sbjct: 224 NEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLK--TSLVDFYSQFSKMEDAVRV 281
Query: 124 IRNMQIDASSVVWETL 139
+ N + +W ++
Sbjct: 282 L-NSSGEQDVFLWTSV 296
Score = 63 (27.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 19/83 (22%), Positives = 42/83 (50%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQ--K 116
G++PN T+ +++ C ++D G Q H +++ ++ + + + L VD+Y + +
Sbjct: 320 GLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNAL--VDMYMKCSASE 377
Query: 117 IAEAREFIRNMQIDASSVVWETL 139
+ +R F + + V W TL
Sbjct: 378 VEASRVF--GAMVSPNVVSWTTL 398
Score = 57 (25.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 27/86 (31%), Positives = 37/86 (43%)
Query: 44 CMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLE 102
C L L+E KR V PN T GV+ AC V + H + R D +
Sbjct: 411 CFGL-LMEMVKR----EVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVG 465
Query: 103 HFLGIVDLYGRLQKIAEAREFIRNMQ 128
+ L VD Y +K+ A IR+M+
Sbjct: 466 NSL--VDAYASSRKVDYAWNVIRSMK 489
>TAIR|locus:2059687 [details] [associations]
symbol:AT2G17210 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR002885
EMBL:CP002685 GenomeReviews:CT485783_GR PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC007127 Pfam:PF13041
IPI:IPI00518475 IPI:IPI01019973 PIR:D84549 RefSeq:NP_179312.1
UniGene:At.66215 ProteinModelPortal:Q9SII7 SMR:Q9SII7 GeneID:816226
KEGG:ath:AT2G17210 GeneFarm:3688 TAIR:At2g17210 eggNOG:NOG312556
HOGENOM:HOG000093021 InParanoid:Q9SII7 PhylomeDB:Q9SII7
ProtClustDB:CLSN2683785 ArrayExpress:Q9SII7 Genevestigator:Q9SII7
Uniprot:Q9SII7
Length = 736
Score = 117 (46.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 29/91 (31%), Positives = 46/91 (50%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L + G PN T++ ++AC G V +G F+S+ + D P+L+H+ I
Sbjct: 532 KALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCI 590
Query: 108 VDLYGRLQKIAEAREFIRNMQID--ASSVVW 136
VD+ R +I A E I+N+ D A + W
Sbjct: 591 VDMLSRAGEIDTAVELIKNLPEDVKAGASAW 621
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVC 44
NS L + ALE+ + + +D ++ LL VC
Sbjct: 318 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 359
>TAIR|locus:2086964 [details] [associations]
symbol:MEF25 "mitochondrial RNA editing factor 25"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:AP000412 IPI:IPI00521244 RefSeq:NP_189142.1 UniGene:At.53485
ProteinModelPortal:Q9LJR6 SMR:Q9LJR6 PRIDE:Q9LJR6
EnsemblPlants:AT3G25060.1 GeneID:822097 KEGG:ath:AT3G25060
GeneFarm:3870 TAIR:At3g25060 eggNOG:NOG267249 InParanoid:Q9LJR6
OMA:DHATFAS PhylomeDB:Q9LJR6 ProtClustDB:CLSN2915355
Genevestigator:Q9LJR6 Uniprot:Q9LJR6
Length = 601
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 24/86 (27%), Positives = 48/86 (55%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVT-RDYDINPTLEHFLGIVDLYGR 113
+ + P+ +TF +++A G V++G QH+ SV Y I P+ +H++ ++DL R
Sbjct: 408 KMTESNIEPDHATFASLLSALSHSGLVEQG-QHWFSVMINKYKIQPSEKHYVCLIDLLAR 466
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
++ EA + I + ++D + +W L
Sbjct: 467 AGRVEEALDMINSEKLDNALPIWVAL 492
>TAIR|locus:2154965 [details] [associations]
symbol:AT5G66500 "AT5G66500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AB013389 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:BX832684 IPI:IPI00521956 RefSeq:NP_201451.1 UniGene:At.49810
UniGene:At.75650 ProteinModelPortal:Q9FJY9 SMR:Q9FJY9 PRIDE:Q9FJY9
EnsemblPlants:AT5G66500.1 GeneID:836782 KEGG:ath:AT5G66500
GeneFarm:4202 TAIR:At5g66500 eggNOG:NOG277507 InParanoid:Q9FJY9
OMA:TSMIDAY PhylomeDB:Q9FJY9 ProtClustDB:CLSN2686843
Genevestigator:Q9FJY9 Uniprot:Q9FJY9
Length = 532
Score = 109 (43.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 30/96 (31%), Positives = 47/96 (48%)
Query: 47 LKLLEAGKRF--ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF 104
+K LE + E GV PN TF+ VI+AC G V EG + F + Y + P EH+
Sbjct: 364 VKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHY 423
Query: 105 LGIVDLYGRLQKIAEAREFI-RNMQIDASSV---VW 136
+ +D+ + + E + R M+ D S+ +W
Sbjct: 424 VCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIW 459
Score = 47 (21.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR 55
N+ L R + K AL V + + + + ++ C LK+L+ GK+
Sbjct: 154 NALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQ 206
>TAIR|locus:2097410 [details] [associations]
symbol:AT3G49740 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132965 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 IPI:IPI00544594
PIR:T46040 RefSeq:NP_190543.1 UniGene:At.35573
ProteinModelPortal:Q9M2Y4 SMR:Q9M2Y4 PRIDE:Q9M2Y4
EnsemblPlants:AT3G49740.1 GeneID:824136 KEGG:ath:AT3G49740
GeneFarm:3703 TAIR:At3g49740 eggNOG:NOG307462 HOGENOM:HOG000115631
InParanoid:Q9M2Y4 OMA:EFTFGSL PhylomeDB:Q9M2Y4
ProtClustDB:CLSN2684366 Genevestigator:Q9M2Y4 Uniprot:Q9M2Y4
Length = 737
Score = 114 (45.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 54 KRFENDG-VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYG 112
K +++G V P+ +TF V++AC G V+EG + F S+ + + ++HF +VDL G
Sbjct: 579 KTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLG 638
Query: 113 RLQKIAEAREFIRNMQ--IDASSVVWETL 139
R + EA ++ + I + VW L
Sbjct: 639 RAGHLDEAESLVKISEKTIGSRVDVWWAL 667
Score = 44 (20.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLE 51
K+A+ V ++ IG+ D LL +DL +LE
Sbjct: 371 KSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE 406
>TAIR|locus:2017744 [details] [associations]
symbol:AT1G22830 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AF000657 EMBL:AC003979 HOGENOM:HOG000115617
ProtClustDB:CLSN2679260 EMBL:AK176394 EMBL:BT023467 IPI:IPI00538128
PIR:B86362 PIR:T00762 RefSeq:NP_001077582.1 RefSeq:NP_173696.1
UniGene:At.41583 ProteinModelPortal:Q4V389 SMR:Q4V389 PRIDE:Q4V389
EnsemblPlants:AT1G22830.1 EnsemblPlants:AT1G22830.2 GeneID:838888
KEGG:ath:AT1G22830 GeneFarm:3637 TAIR:At1g22830 eggNOG:NOG314509
InParanoid:Q4V389 OMA:HEFALME PhylomeDB:Q4V389
Genevestigator:Q4V389 Uniprot:Q4V389
Length = 703
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 28/88 (31%), Positives = 44/88 (50%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K + G++P+ T V V++AC V EG F + + I LEH+ +VDLY R
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEK 141
+ +AR+ + + SS + TL K
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLK 601
>TAIR|locus:2062939 [details] [associations]
symbol:AT2G46050 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC005397 Pfam:PF01535 TIGRFAMs:TIGR00756 IPI:IPI00535852
PIR:B84898 RefSeq:NP_182129.1 UniGene:At.65051
ProteinModelPortal:O82363 SMR:O82363 PRIDE:O82363
EnsemblPlants:AT2G46050.1 GeneID:819213 KEGG:ath:AT2G46050
GeneFarm:3686 TAIR:At2g46050 eggNOG:NOG298418 HOGENOM:HOG000242240
InParanoid:O82363 OMA:QHLACLV PhylomeDB:O82363
ProtClustDB:CLSN2683448 Genevestigator:O82363 Uniprot:O82363
Length = 590
Score = 115 (45.5 bits), Expect = 0.00046, P = 0.00046
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 51 EAGKRFEN--DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIV 108
E+ + FE+ ++P+ TF+ V++AC G V EG + F+ +T Y I EH+ ++
Sbjct: 426 ESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLI 485
Query: 109 DLYGRLQKIAEAREFIRNMQIDASS 133
DL GR I EA + + +M + S+
Sbjct: 486 DLLGRAGFIDEASDVLNSMPTEPST 510
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 245 229 0.00082 113 3 11 22 0.40 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 153
No. of states in DFA: 601 (64 KB)
Total size of DFA: 185 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.39u 0.12s 18.51t Elapsed: 00:00:00
Total cpu time: 18.41u 0.12s 18.53t Elapsed: 00:00:00
Start: Thu May 9 17:13:31 2013 End: Thu May 9 17:13:31 2013
WARNINGS ISSUED: 1