BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043265
(245 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302142415|emb|CBI19618.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/224 (54%), Positives = 152/224 (67%), Gaps = 39/224 (17%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ + DG+ P+ STF+GV++AC C GAV+EG HF S++ DY I P++EHF IVDL+GRL
Sbjct: 338 KLKKDGIEPDGSTFIGVLSACECLGAVEEGLAHFNSMSTDYGITPSMEHFAIIVDLFGRL 397
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPS-----SSLRLSNKK----- 164
QKIAEA+EFI +M ++ SS++W+TL+KY +TE + EP+ S L+LS+KK
Sbjct: 398 QKIAEAKEFIASMPLEPSSMIWQTLQKYLKTER---VDEPAPLTTGSGLKLSHKKRVKSN 454
Query: 165 --------------------------KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAV 198
K+AGY+ T YVL DLDQEAKEK Y SERLA+
Sbjct: 455 FVSKQKNASPEKSKAYEKLRSLHKGVKEAGYVSDTRYVLHDLDQEAKEKSLLYHSERLAI 514
Query: 199 AYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
AYGLISTPPG TLRI KNLRICG+CHNFIK LS+IE REIIVRD
Sbjct: 515 AYGLISTPPGTTLRIIKNLRICGDCHNFIKILSNIEKREIIVRD 558
>gi|224136634|ref|XP_002326908.1| predicted protein [Populus trichocarpa]
gi|222835223|gb|EEE73658.1| predicted protein [Populus trichocarpa]
Length = 238
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 145/220 (65%), Gaps = 33/220 (15%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
+ DG+RP+ S+FVGV+ AC C GA EG +HFES++RDY I PT+EH+ VDL GR
Sbjct: 1 MKGDGIRPDGSSFVGVLMACVCLGAEKEGQKHFESMSRDYGITPTVEHYEVFVDLLGRTG 60
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQ-----------TEPGLLLGEPSSS------- 157
KIAEA+E + NM ID +S +WETL+KY++ + PGL LG+ +
Sbjct: 61 KIAEAKELVSNMPIDPNSRIWETLQKYSKARTQGQLGYPVSPPGLKLGDMKRAKDNTNTN 120
Query: 158 --------------LR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGL 202
LR LS + +DAGY+P T +VL DLDQEAKEK Y SERLA+AYGL
Sbjct: 121 HRRVTSDRSKAYEKLRSLSKEVRDAGYVPDTRFVLHDLDQEAKEKALFYHSERLAIAYGL 180
Query: 203 ISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
I+T PG TLRI KNLRICG+CHNFIK LS IE+RE IVRD
Sbjct: 181 INTSPGTTLRIMKNLRICGDCHNFIKILSKIEDREFIVRD 220
>gi|225428796|ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
[Vitis vinifera]
Length = 593
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 134/245 (54%), Gaps = 52/245 (21%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
L+L E ++ G+ PN TF+ V++ C AV+EGF HFES+ +Y I PT EH++G
Sbjct: 334 LQLYEQMRKL---GLEPNEQTFLAVLSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVG 390
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL-------- 158
I+D+ G+ + EA+EFI M ++ S+VVWE L YA+ + L + + L
Sbjct: 391 IIDVLGKSGHVIEAKEFIEQMPVEPSAVVWEALMNYAKIHGDIDLEDHAEELMVALDPLK 450
Query: 159 ------------------------RLS-----------------NKKKDAGYMPYTEYVL 177
RLS N K+AGY+P T YVL
Sbjct: 451 AVANKTPTPPPKKRTAINMLDGKNRLSEFRNPTLYKDDEKLKSLNGMKEAGYVPDTRYVL 510
Query: 178 RDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENRE 237
D+DQEAKE+ Y SERLA+AYGLISTP LRI KNLR+CG+CHN IK +S I RE
Sbjct: 511 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSKIVGRE 570
Query: 238 IIVRD 242
+IVRD
Sbjct: 571 LIVRD 575
>gi|147834943|emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]
Length = 627
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 134/245 (54%), Gaps = 52/245 (21%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
L+L E ++ G+ PN TF+ V++ C AV+EGF HFES+ +Y I PT EH++G
Sbjct: 368 LQLYEQMRKL---GLEPNEQTFLAVLSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVG 424
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL-------- 158
I+D+ G+ + EA+EFI M ++ S+VVWE L YA+ + L + + L
Sbjct: 425 IIDVLGKSGHVIEAKEFIEQMPVEPSAVVWEALMNYAKIHGDIDLEDHAEELMVALDPLK 484
Query: 159 ------------------------RLS-----------------NKKKDAGYMPYTEYVL 177
RLS N K+AGY+P T YVL
Sbjct: 485 AVANKTPTPPPKKRTAINMLDGKNRLSEFRNPTLYKDDEKLKSLNGMKEAGYVPDTRYVL 544
Query: 178 RDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENRE 237
D+DQEAKE+ Y SERLA+AYGLISTP LRI KNLR+CG+CHN IK +S I RE
Sbjct: 545 HDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSKIVGRE 604
Query: 238 IIVRD 242
+IVRD
Sbjct: 605 LIVRD 609
>gi|224070865|ref|XP_002303271.1| predicted protein [Populus trichocarpa]
gi|222840703|gb|EEE78250.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 132/245 (53%), Gaps = 52/245 (21%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
L+L E K+ G+ P TF V++AC AV+EGF +FE ++R++ I+PTLEH+L
Sbjct: 75 LELFEQMKKL---GLEPTGETFHAVLSACASAEAVEEGFLYFEEMSREFGISPTLEHYLS 131
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPS--------SSL 158
I+D+ G+ + EA E+I + + + +WE L KYA++ + L + + SS
Sbjct: 132 IIDVLGKSAYLNEAVEYIEKLPFEPTVEIWEALRKYARSHGDIDLEDHAEELIVSLDSSK 191
Query: 159 RLSNK-----------------------------------------KKDAGYMPYTEYVL 177
++NK K GY+P T YVL
Sbjct: 192 AVANKIPTPPPKKYNLISMLEGKNRVAEFRNPTFYKDDEKLKELREMKTGGYVPDTRYVL 251
Query: 178 RDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENRE 237
D+DQEAKE+ Y SERLA+AYGLISTP LRI KNLR+CG+CHN IK +S I RE
Sbjct: 252 HDIDQEAKEQALLYHSERLAIAYGLISTPARMPLRIIKNLRVCGDCHNAIKIMSKIVGRE 311
Query: 238 IIVRD 242
+IVRD
Sbjct: 312 LIVRD 316
>gi|357501047|ref|XP_003620812.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495827|gb|AES77030.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 468
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 126/226 (55%), Gaps = 38/226 (16%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K+ GV P+ TF V+ C V+EG FES+ ++Y I P +EH+LG+V+++G
Sbjct: 189 KQMRQQGVVPDEETFALVLAVCALVDGVEEGLMQFESM-KEYGIVPGMEHYLGVVNIFGC 247
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGL---------LLGEPSSS----LRL 160
+ EA+EFI NM I+A VWETL +A+ L + +PS + + L
Sbjct: 248 AGPLDEAQEFIENMPIEAGVDVWETLRNFARIYGDLEREDRAKLLTVRDPSKAAADKMPL 307
Query: 161 SNKKK------------------------DAGYMPYTEYVLRDLDQEAKEKPQTYRSERL 196
+KK +AGY+P T YVL D+D+E KEK Y SERL
Sbjct: 308 PQRKKQSAINMLEEKNRVSEYRCLTGQIREAGYVPDTRYVLHDIDEEEKEKALRYHSERL 367
Query: 197 AVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
A+AYGLISTPP LRI KNLRICG+CHN IK +S I ++IVRD
Sbjct: 368 AIAYGLISTPPRTMLRIIKNLRICGDCHNAIKFMSKIVGMKLIVRD 413
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N H +E V LE+M + G F D D + LL +C DLK LE GKR R
Sbjct: 72 NVNFAHFLQEGNVNQVLELMGQ----GAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRR 127
Query: 63 PNW-------STFVGVITACG 76
+ + +G+ CG
Sbjct: 128 SKFGGNVELCNRLIGLYVKCG 148
>gi|147835805|emb|CAN64107.1| hypothetical protein VITISV_013147 [Vitis vinifera]
Length = 497
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 129/241 (53%), Gaps = 55/241 (22%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+R G+RP TFV V++ACG +V+EG +FE + ++ I P +EH+LG++D+ G+
Sbjct: 223 ERMRKVGLRPVGETFVAVLSACG---SVEEGLMYFELMKKECGIIPGIEHYLGVIDVLGK 279
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQ----------TEPGLLLGEPSSSLR---- 159
I EA EF+ M I+ ++ VWE L +A+ E L +PS ++
Sbjct: 280 FGHINEAEEFVDKMPIEPTAEVWEALRNFARIHGAIELEDRAEEMLAALDPSKAITDKIP 339
Query: 160 --------------------------------------LSNKKKDAGYMPYTEYVLRDLD 181
L+ + ++AGY+P T YVL D+D
Sbjct: 340 TPPQKKQLAVNMLEGKNRVSEYRSTNPYKGDAYEKLKGLNGQMREAGYVPDTRYVLHDID 399
Query: 182 QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVR 241
QEAKE+ Y SERLA+AYGLISTP LRI KNLRICG+CHN IK +S I RE+IVR
Sbjct: 400 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 459
Query: 242 D 242
D
Sbjct: 460 D 460
>gi|225444971|ref|XP_002279824.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Vitis vinifera]
Length = 476
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 129/241 (53%), Gaps = 55/241 (22%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+R G+RP TFV V++ACG +V+EG +FE + ++ I P +EH+LG++D+ G+
Sbjct: 221 ERMRKVGLRPVGETFVAVLSACG---SVEEGLMYFELMKKECGIIPGIEHYLGVIDVLGK 277
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQ----------TEPGLLLGEPSSSLR---- 159
I EA EF+ M I+ ++ VWE L +A+ E L +PS ++
Sbjct: 278 FGHINEAEEFVDKMPIEPTAEVWEALRNFARIHGAIELEDRAEEMLAALDPSKAITDKIP 337
Query: 160 --------------------------------------LSNKKKDAGYMPYTEYVLRDLD 181
L+ + ++AGY+P T YVL D+D
Sbjct: 338 TPPQKKQLAVNMLEGKNRVSEYRSTNPYKGDAYEKLKGLNGQMREAGYVPDTRYVLHDID 397
Query: 182 QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVR 241
QEAKE+ Y SERLA+AYGLISTP LRI KNLRICG+CHN IK +S I RE+IVR
Sbjct: 398 QEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 457
Query: 242 D 242
D
Sbjct: 458 D 458
>gi|357501199|ref|XP_003620888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495903|gb|AES77106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 446
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 148/283 (52%), Gaps = 59/283 (20%)
Query: 15 VKAALEVMDKL--KNIGIFLDSPDIIELLNV-CMDLKLLEAGKRFENDGVRPNWSTFVGV 71
VK A +V DK+ +N+G +I NV + + L K+ GV P+ TF V
Sbjct: 150 VKDARKVFDKMPDRNVGSL---NLMIGGYNVNGLGIDGLLVFKQMRQQGVVPDEETFALV 206
Query: 72 ITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDA 131
+ C V+EG FES+ ++Y I P +EH+LG+V+++G ++ EA EFI NM I+A
Sbjct: 207 LAVCALVDGVEEGLMQFESM-KEYGIVPGMEHYLGVVNIFGCAGRLDEAHEFIENMPIEA 265
Query: 132 SSVVWET----------LEKYAQTEPGLLLGEPSSS------------------------ 157
+WET LE+ + L + +PS +
Sbjct: 266 GVELWETLRNFARIHGDLEREDCADELLTVLDPSKAAADKVPLPQRKKQSAINMLEEKNR 325
Query: 158 -----------------LR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVA 199
LR L+ + ++AGY+P T YVL D+D+E KEK Y SERLA+A
Sbjct: 326 VSEYRCNMPYKEEGDVKLRGLTGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIA 385
Query: 200 YGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
YGLISTPP TLRI KNLRICG+CHN IK +S I RE+IVRD
Sbjct: 386 YGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRD 428
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N H +E V LE+M + G F D D + LL +C DLK LE GKR R
Sbjct: 72 NVNFAHFLQEGNVNQVLELMGQ----GAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRR 127
Query: 63 PNWSTFVGVITAC 75
S F G + C
Sbjct: 128 ---SKFGGNVELC 137
>gi|449519292|ref|XP_004166669.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g15690-like [Cucumis sativus]
Length = 588
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 129/242 (53%), Gaps = 49/242 (20%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE + +N G++PN TF+ V++AC AV+EGF +FES+ DY I P H+LG++
Sbjct: 329 LELFENMKNLGLQPNSQTFLYVMSACASANAVEEGFLYFESMKNDYHITPDTNHYLGLLG 388
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL--------RLS 161
+ G I EA E++ + ++ + VWETL+ YA+ + L + + L +S
Sbjct: 389 ILGEPGHIHEAFEYVEKLPMEPTVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAVS 448
Query: 162 NK-----------------------------------------KKDAGYMPYTEYVLRDL 180
NK K+ GY+P T YVL D+
Sbjct: 449 NKISTPPPKNXSAISMLDGKNRIVEFRNPTLYKDDXKLKALKAMKEQGYVPDTRYVLHDI 508
Query: 181 DQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIV 240
DQEAKE+ Y SERLA+AYGLISTP LRI KNLRICG+CHN IK +S I RE+IV
Sbjct: 509 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIV 568
Query: 241 RD 242
RD
Sbjct: 569 RD 570
>gi|357501237|ref|XP_003620907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495922|gb|AES77125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 468
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 125/226 (55%), Gaps = 38/226 (16%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K+ GV P+ TF V+ C V+EG FES+ ++Y I P +EH+LG+ +++G
Sbjct: 189 KQMRQQGVVPDEETFALVLAVCALVDGVEEGLMQFESM-KEYGIVPGMEHYLGVDNIFGC 247
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGL---------LLGEPSSS----LRL 160
+ EA+EFI NM I+A VWETL +A+ L + +PS + + L
Sbjct: 248 AGPLDEAQEFIENMPIEAGVDVWETLRNFARIYGDLEREDRAKLLTVRDPSKAAADKMPL 307
Query: 161 SNKKK------------------------DAGYMPYTEYVLRDLDQEAKEKPQTYRSERL 196
+KK +AGY+P T YVL D+D+E KEK Y SERL
Sbjct: 308 PQRKKQSAINMLEEKNRVSEYRCLTGQIREAGYVPDTRYVLHDIDEEEKEKALRYHSERL 367
Query: 197 AVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
A+AYGLISTPP LRI KNLRICG+CHN IK +S I ++IVRD
Sbjct: 368 AIAYGLISTPPRTMLRIIKNLRICGDCHNAIKFMSKIVGMKLIVRD 413
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N H +E V LE+M + G F D D + LL +C DLK LE GKR R
Sbjct: 72 NVNFAHFLQEGNVNQVLELMGQ----GAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRR 127
Query: 63 PNW-------STFVGVITACG 76
+ + +G+ CG
Sbjct: 128 SKFGGNVELCNRLIGLYVKCG 148
>gi|358248494|ref|NP_001239891.1| uncharacterized protein LOC100783921 [Glycine max]
gi|255636013|gb|ACU18351.1| unknown [Glycine max]
Length = 449
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 126/232 (54%), Gaps = 53/232 (22%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
P+ TF V+ AC AV+EGF HFES+ ++Y I P++EH+L ++++ G ++ EA E
Sbjct: 201 PDGETFELVLAACSQAEAVEEGFLHFESM-KEYGIVPSMEHYLEVINIMGNAGQLKEAEE 259
Query: 123 FIRNMQIDASSVVWETLEKYAQTEPGLLLGE----------PSSSLR------------- 159
FI N+ I+ WE+L K+A+ L L + PS ++
Sbjct: 260 FIENVPIELGVEAWESLRKFARIHGDLDLEDCAEELLTRFDPSKAIADKLPTPPRKKQSD 319
Query: 160 -----------------------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQT 190
LS + ++AGY+P T YVL D+D+E KEK
Sbjct: 320 VNMLEEKNRATEYRYSIPYKEEDNEKLGGLSGQMREAGYVPDTRYVLHDIDEEEKEKALQ 379
Query: 191 YRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
Y SERLA+AYGLISTPP TLRI KNLRICG+CHN IK +S I RE+IVRD
Sbjct: 380 YHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRD 431
>gi|356497955|ref|XP_003517821.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Glycine max]
Length = 452
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 129/241 (53%), Gaps = 53/241 (21%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
++ + GV P+ TF V+ AC AV+EGF HFES+ +++ I P++EH+L ++++ G
Sbjct: 195 QQMKQAGVPPDGETFELVLAACAQAEAVEEGFLHFESM-KEHGIVPSMEHYLEVINILGN 253
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQ----------TEPGLLLGEPSSSLR---- 159
++ EA EFI + I+ WE+L +AQ E L +PS ++
Sbjct: 254 TGQLNEAEEFIEKIPIELGVEAWESLRNFAQKHGDLDLEDHAEEVLTCLDPSKAVADKLP 313
Query: 160 --------------------------------------LSNKKKDAGYMPYTEYVLRDLD 181
LS + ++AGY+P T YVL D+D
Sbjct: 314 PPPRKKQSDMNMLEEKNRVTEYRYSIPYKEEAHEKLGGLSGQMREAGYVPDTRYVLHDID 373
Query: 182 QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVR 241
+E KEK Y SERLA+AYGLISTPP TLRI KNLRICG+CHN IK +S I RE+IVR
Sbjct: 374 EEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVR 433
Query: 242 D 242
D
Sbjct: 434 D 434
>gi|388511541|gb|AFK43832.1| unknown [Lotus japonicus]
Length = 295
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 122/232 (52%), Gaps = 49/232 (21%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ T + V++ACG AV++ F HF+S+ Y I P +EH++G++D+ G+ + E
Sbjct: 46 GLEITSETLLAVLSACGSAEAVEDAFLHFDSMKSKYGIEPGVEHYMGLLDVLGQSGYLKE 105
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGL--------LLGEPSSSLRLSNK-------- 163
A EFI + + + VWETL+ YA+ + L+ S ++NK
Sbjct: 106 AEEFIEKLPFEPTLTVWETLKNYARIHGDIDLEDHVEELMVNLDPSKAVANKIPTPPPKK 165
Query: 164 ---------------------------------KKDAGYMPYTEYVLRDLDQEAKEKPQT 190
KDAGY+P T YVL D+DQEAK +
Sbjct: 166 YNHISMLDGRNRIIEYKNPSLYKDDEKLKALIGMKDAGYVPDTRYVLHDIDQEAKGQALL 225
Query: 191 YRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
Y SERLA+AYGLISTPP LRI KNLR+CG+CHN IK +S I RE+IVRD
Sbjct: 226 YHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 277
>gi|297836184|ref|XP_002885974.1| hypothetical protein ARALYDRAFT_480424 [Arabidopsis lyrata subsp.
lyrata]
gi|297331814|gb|EFH62233.1| hypothetical protein ARALYDRAFT_480424 [Arabidopsis lyrata subsp.
lyrata]
Length = 548
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 124/230 (53%), Gaps = 47/230 (20%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++PN TF+ V AC G + E F HF+S+ ++ I+P EH+LG++ + G+ + E
Sbjct: 301 GLKPNEETFLTVFLACATVGGIKEAFLHFDSMRNEHGISPKTEHYLGVLGVLGKCGHLIE 360
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGL--------LLGEPSSSLRLSNK-------- 163
A ++IR++ + ++ WE + YA+ + L+ + SS ++NK
Sbjct: 361 AEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDLDSSKAVTNKIPTPQPKS 420
Query: 164 -------------------------------KKDAGYMPYTEYVLRDLDQEAKEKPQTYR 192
KK Y+P T +VL D+DQEAKE+ Y
Sbjct: 421 FKETNMVTSKSRILEFRNLTFYKDEAKEMAAKKGVVYVPDTRFVLHDIDQEAKEQALLYH 480
Query: 193 SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
SERLA+AYG+I TPP +TL I KNLR+CG+CHNFIK +S I RE+IVRD
Sbjct: 481 SERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRELIVRD 530
>gi|449438679|ref|XP_004137115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 688
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 130/242 (53%), Gaps = 49/242 (20%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE + +N G++PN TF+ V++AC AV+EGF +FES+ DY I P H+LG++
Sbjct: 429 LELFENMKNLGLQPNSQTFLYVMSACASANAVEEGFLYFESMKNDYHITPDTNHYLGLLG 488
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL------------EKYAQ------------- 144
+ G I EA E++ + ++ + VWETL E YA+
Sbjct: 489 ILGEPGHIHEAFEYVEKLPMEPTVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAVS 548
Query: 145 ----TEP-------GLLLGE--------PS-----SSLRLSNKKKDAGYMPYTEYVLRDL 180
T P +L G+ P+ L+ K+ GY+P T YVL D+
Sbjct: 549 NKISTPPPKKRSAISMLDGKNRIVEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDI 608
Query: 181 DQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIV 240
DQEAKE+ Y SERLA+AYGLISTP LRI KNLRICG+CHN IK +S I RE+IV
Sbjct: 609 DQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIV 668
Query: 241 RD 242
RD
Sbjct: 669 RD 670
>gi|18397896|ref|NP_565377.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216221|sp|Q9ZQE5.2|PP153_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g15690
gi|14335136|gb|AAK59848.1| At2g15690/F9O13.24 [Arabidopsis thaliana]
gi|20197709|gb|AAD17413.2| Expressed protein [Arabidopsis thaliana]
gi|29028728|gb|AAO64743.1| At2g15690/F9O13.24 [Arabidopsis thaliana]
gi|330251336|gb|AEC06430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 579
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 122/230 (53%), Gaps = 47/230 (20%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++PN TF+ V AC G ++E F HF+S+ ++ I+P EH+LG++ + G+ + E
Sbjct: 332 GLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVE 391
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE----------------------PSSS 157
A ++IR++ + ++ WE + YA+ + L + P S
Sbjct: 392 AEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKS 451
Query: 158 LRLSN-------------------------KKKDAGYMPYTEYVLRDLDQEAKEKPQTYR 192
+ +N KK Y+P T +VL D+DQEAKE+ Y
Sbjct: 452 FKETNMVTSKSRILEFRNLTFYKDEAKEMAAKKGVVYVPDTRFVLHDIDQEAKEQALLYH 511
Query: 193 SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
SERLA+AYG+I TPP +TL I KNLR+CG+CHNFIK +S I R +IVRD
Sbjct: 512 SERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRD 561
>gi|356500039|ref|XP_003518842.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Glycine max]
Length = 591
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 120/225 (53%), Gaps = 49/225 (21%)
Query: 67 TFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRN 126
T + V++AC V++ F HFES+ Y I P +EH++G++D+ G+ + EA EFI
Sbjct: 349 TLLAVLSACASAEDVEDAFLHFESMKSKYGIEPGVEHYMGLLDVLGQSAYLKEAEEFIDQ 408
Query: 127 MQIDASSVVWETLEKYAQ----------TEPGLLLGEPSSS------------------- 157
+ + + VWE L+ YA+ TE ++ +PS +
Sbjct: 409 LPFEPTVAVWEKLKHYARVHGDVDLEDYTEELIVSLDPSKAVANKIPTPPPKKYTAINML 468
Query: 158 --------------------LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLA 197
L+ + K+ GY+P T YVL D+DQEAKE+ Y SERLA
Sbjct: 469 DGRNRIIEYKNPTLYKDDEKLKALSGMKETGYVPDTRYVLHDIDQEAKEQALLYHSERLA 528
Query: 198 VAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+AYGLISTPP LRI KNLR+CG+CHN IK +S I RE+IVRD
Sbjct: 529 IAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 573
>gi|356521500|ref|XP_003529393.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Glycine max]
Length = 588
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 120/225 (53%), Gaps = 49/225 (21%)
Query: 67 TFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRN 126
T + V++AC V++ F HFES+ Y I P + H++G++D+ G+ + EA EFI
Sbjct: 346 TLLAVLSACASAEDVEDAFLHFESMKSKYGIEPVVGHYMGLLDVLGQSAYLKEAEEFIDQ 405
Query: 127 MQIDASSVVWETLEKYAQ----------TEPGLLLGEPSSS------------------- 157
+ + + VWE L+ YA+ TE ++ +PS +
Sbjct: 406 LPFEPTVAVWEKLKHYARAHGDFDLEDYTEELIVSLDPSKAVANKIPMPPPKKYTAINML 465
Query: 158 --------------------LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLA 197
L+ + K+AGY+P T YVL D+DQEAKE+ Y SERLA
Sbjct: 466 DGRNRIIEYKNPTLYKDDEKLKALSGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLA 525
Query: 198 VAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+AYGLISTPP LRI KNLR+CG+CHN IK +S I RE+IVRD
Sbjct: 526 IAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 570
>gi|357475405|ref|XP_003607988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509043|gb|AES90185.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 565
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 120/225 (53%), Gaps = 49/225 (21%)
Query: 67 TFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRN 126
T + V++ACG AV++ + + ES+ Y I P +EH++G++D+ G+ + EA EFI
Sbjct: 323 TMLAVLSACGSAEAVEDAYIYLESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIEQ 382
Query: 127 MQIDASSVVWETLEKYA----------QTEPGLLLGEPSSS------------------- 157
+ + + V+ETL+ YA E ++ +PS +
Sbjct: 383 LPFEPTVTVFETLKNYARIHGDVDLEDHVEELIVSLDPSKAVANKIPTPPPKKYTAISML 442
Query: 158 --------------------LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLA 197
L N KDAGY+P T YVL D+DQEAKE+ Y SERLA
Sbjct: 443 DGKNRIIEYKNPTLYKDDEKLIAMNSMKDAGYVPDTRYVLHDIDQEAKEQALLYHSERLA 502
Query: 198 VAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+AYGLISTPP LRI KNLR+CG+CHN IK +S I RE+IVRD
Sbjct: 503 IAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 547
>gi|388508872|gb|AFK42502.1| unknown [Medicago truncatula]
Length = 565
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 120/225 (53%), Gaps = 49/225 (21%)
Query: 67 TFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRN 126
T + V++ACG AV++ + + ES+ Y I P +EH++G++D+ G+ + EA EFI
Sbjct: 323 TMLAVLSACGSAEAVEDAYIYLESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEEFIEQ 382
Query: 127 MQIDASSVVWETLEKYA----------QTEPGLLLGEPSSS------------------- 157
+ + + V+ETL+ YA E ++ +PS +
Sbjct: 383 LPFEPTVTVFETLKNYARIHGDVDLEDHVEELIVSLDPSKAVANKIPTPPPKKYTAISML 442
Query: 158 --------------------LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLA 197
L N KDAGY+P T YVL D+DQEAKE+ Y SERLA
Sbjct: 443 DGKNRIIEYKNPTLYKDDEKLIAMNSMKDAGYVPDTRYVLHDIDQEAKEQALLYHSERLA 502
Query: 198 VAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+AYGLISTPP LRI KNLR+CG+CHN IK +S I RE+IVRD
Sbjct: 503 IAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRD 547
>gi|297735282|emb|CBI17644.3| unnamed protein product [Vitis vinifera]
Length = 628
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 118/196 (60%), Gaps = 6/196 (3%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA + FE N+G+ PN +FVGV+TAC G ++EG ++F + Y I P EHF +
Sbjct: 417 EAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCM 476
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL-RLSNKKKD 166
VDLYGR ++ E +EFI N I S VW + ++ P + S L L + K+
Sbjct: 477 VDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSYRSHPQDT--KIYSYLDELIGRLKE 534
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
GY V++D++QE ++ Y SE+LA+AYG+IST PG +R+ KNLR+C +CHNF
Sbjct: 535 IGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNF 594
Query: 227 IKKLSSIENREIIVRD 242
IK S + REII+RD
Sbjct: 595 IKYASELLGREIIIRD 610
>gi|125547430|gb|EAY93252.1| hypothetical protein OsI_15058 [Oryza sativa Indica Group]
Length = 407
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 123/225 (54%), Gaps = 42/225 (18%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ P TF V+ AC A++E F +F++++RD+ I P +EH++GI+++ G+ + E
Sbjct: 165 GIAPTAHTFTLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGHLNE 224
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS------------------ 161
A E+I + + ++ VWE+L A+ + L + + L +S
Sbjct: 225 AVEYIEKLPFEPTATVWESLLNLARMNGDIDLEDRAEELLVSLDPTKVNPKKLPTPPPKR 284
Query: 162 ----------NK-----------KK---DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLA 197
NK KK + Y+P T YVL D+DQEAKE+ Y SERLA
Sbjct: 285 RLGINMLDGRNKLVEYRLPPKIEKKVVNEQRYVPDTRYVLHDIDQEAKEQALLYHSERLA 344
Query: 198 VAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+AYGLISTP LRI KNLRICG+CHN IK +S I RE+IVRD
Sbjct: 345 IAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRD 389
>gi|297602164|ref|NP_001052155.2| Os04g0174800 [Oryza sativa Japonica Group]
gi|255675179|dbj|BAF14069.2| Os04g0174800 [Oryza sativa Japonica Group]
Length = 299
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 122/225 (54%), Gaps = 42/225 (18%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ P TF V+ AC A++E F +F++++RD+ I P +EH++GI+++ G+ + E
Sbjct: 57 GIAPTAHTFTLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGHLNE 116
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS------------------ 161
A E+I + + + VWE+L A+ + L + + L +S
Sbjct: 117 AVEYIEKLPFEPTDTVWESLLNLARMNGDIDLEDRAEELLVSLDPTKVNPKKLPTPPPKR 176
Query: 162 ----------NK-----------KK---DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLA 197
NK KK + Y+P T YVL D+DQEAKE+ Y SERLA
Sbjct: 177 RLGINMLDGRNKLVEYRLPPKIEKKVVNEQRYVPDTRYVLHDIDQEAKEQALLYHSERLA 236
Query: 198 VAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+AYGLISTP LRI KNLRICG+CHN IK +S I RE+IVRD
Sbjct: 237 IAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRD 281
>gi|326515404|dbj|BAK03615.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 132/238 (55%), Gaps = 45/238 (18%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
L+L E KR G+ P TFV V+ AC A++E F +F++++RD+ I P +EH++G
Sbjct: 286 LQLFEEMKRC---GMAPTARTFVLVLDACANSEAIEEAFLYFDAMSRDHGIEPGMEHYVG 342
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQ----------TEPGLLLGEPSS 156
I+++ G+ + EA E++ + + ++++WE++ A+ E L+ +PS
Sbjct: 343 IIEVLGKSGHLNEAVEYVEKLPFEPNAMIWESVLNLARMNGDIDLEDRVEELLVSLDPSK 402
Query: 157 S---------------------------LRLSNK--KK---DAGYMPYTEYVLRDLDQEA 184
+ RL K KK + Y+P T YVL D+DQEA
Sbjct: 403 ANPKKLPTPPPKRRLGINMLDGRNKLGEYRLPPKIEKKVVNEQRYVPDTRYVLHDIDQEA 462
Query: 185 KEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
KE+ Y SERLA+AYGLISTP LRI KNLRICG+CHN IK +S I RE+IVRD
Sbjct: 463 KEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRD 520
>gi|224128233|ref|XP_002320276.1| predicted protein [Populus trichocarpa]
gi|222861049|gb|EEE98591.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 122/243 (50%), Gaps = 55/243 (22%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+F+ G++P+ FVGV +AC G ++EG HFES+ +++ I P++EH++ IVD+ G
Sbjct: 76 QFKQGGLKPDAQIFVGVFSACNVLGDINEGLLHFESMWKEFSIVPSMEHYVSIVDMLGSN 135
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLG----------EPSSSLRLSN-- 162
+ EA EFI M ++ S VWETL + L LG +PS SN
Sbjct: 136 GYLVEALEFIEKMPMEPSVDVWETLMNLCRAHGHLELGDRCAELIEQLDPSRLNEQSNAG 195
Query: 163 -------------------------------------------KKKDAGYMPYTEYVLRD 179
+ KDAGY+P T +VL D
Sbjct: 196 LVPKKTASQNLLDVRSRVHEYRAGDTSFPDRDRVYALLRGMKAQMKDAGYIPVTRFVLHD 255
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREII 239
+D+E+KE SERLA A+GL++T LR+ KNLR CG+CHN +K +S + R++I
Sbjct: 256 IDEESKEDALLAHSERLATAHGLLTTAARSPLRVVKNLRFCGDCHNAMKIISKLVGRQLI 315
Query: 240 VRD 242
+RD
Sbjct: 316 MRD 318
>gi|242089073|ref|XP_002440369.1| hypothetical protein SORBIDRAFT_09g030460 [Sorghum bicolor]
gi|241945654|gb|EES18799.1| hypothetical protein SORBIDRAFT_09g030460 [Sorghum bicolor]
Length = 642
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 125/236 (52%), Gaps = 44/236 (18%)
Query: 51 EAGKRFE--NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIV 108
EA + FE + + P T++ V+ AC A++E +F++++RD+ I P +EH++GI+
Sbjct: 389 EALRLFELMKECMAPTSQTYLLVLNACANSEAIEEALLYFDAMSRDHGIEPGVEHYVGII 448
Query: 109 DLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
++ G+ + EA EFI + + +++VWE+L AQ + L + + L +S A
Sbjct: 449 EVLGKSGHLNEALEFIEKLPFEPNAMVWESLLNLAQMNGDIDLEDRAEELLVSLDPSKAN 508
Query: 169 ------------------------------------------YMPYTEYVLRDLDQEAKE 186
Y+P T YVL D+DQEAKE
Sbjct: 509 PKKLPTPPPKRRLGINMLDGRNKLVEYRLPPKIEKKVVNEQRYVPDTRYVLHDIDQEAKE 568
Query: 187 KPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+ Y SERLA+AYGLISTP LRI KNLRICG+CHN IK +S I RE+IVRD
Sbjct: 569 QALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRD 624
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 119/228 (52%), Gaps = 42/228 (18%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
N GV+PN TF+G++ AC G V++G ++F S+TRDY I P +EH+ +VDL+ R +
Sbjct: 339 NTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLL 398
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSS-------------LRLSNKK 164
EA EFI NM I + VVW L + + L E ++ + LSN
Sbjct: 399 QEAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIY 458
Query: 165 KDAG-----------------------------YMPYTEYVLRDLDQEAKEKPQTYRSER 195
+AG Y+P T VL D++++ KEK SE+
Sbjct: 459 AEAGRWEDVARVRKLMRDRGTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEK 518
Query: 196 LAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
LAV +GLI T PG +RI KNLR+C +CH +K +S + REI+VRD+
Sbjct: 519 LAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDR 566
>gi|38347147|emb|CAD39490.2| OSJNBa0039G19.7 [Oryza sativa Japonica Group]
Length = 557
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 122/225 (54%), Gaps = 42/225 (18%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ P TF V+ AC A++E F +F++++RD+ I P +EH++GI+++ G+ + E
Sbjct: 315 GIAPTAHTFTLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGHLNE 374
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS------------------ 161
A E+I + + + VWE+L A+ + L + + L +S
Sbjct: 375 AVEYIEKLPFEPTDTVWESLLNLARMNGDIDLEDRAEELLVSLDPTKVNPKKLPTPPPKR 434
Query: 162 ----------NK-----------KK---DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLA 197
NK KK + Y+P T YVL D+DQEAKE+ Y SERLA
Sbjct: 435 RLGINMLDGRNKLVEYRLPPKIEKKVVNEQRYVPDTRYVLHDIDQEAKEQALLYHSERLA 494
Query: 198 VAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+AYGLISTP LRI KNLRICG+CHN IK +S I RE+IVRD
Sbjct: 495 IAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRD 539
>gi|242056975|ref|XP_002457633.1| hypothetical protein SORBIDRAFT_03g010835 [Sorghum bicolor]
gi|241929608|gb|EES02753.1| hypothetical protein SORBIDRAFT_03g010835 [Sorghum bicolor]
Length = 396
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 44/236 (18%)
Query: 51 EAGKRFE--NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIV 108
EA + FE + + P T+V V+ AC A++E F +F++++RD+ I P +EH++GI+
Sbjct: 143 EALRMFELMKECLAPTSHTYVLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGII 202
Query: 109 DLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS------N 162
++ G+ + EA E+I + + +++VWE++ A+ + L + + L +S N
Sbjct: 203 EVLGKSGHLNEALEYIEKLPFEPNAMVWESVLNLARMNGDIDLEDRAEELLVSLDPSKAN 262
Query: 163 KKK------------------------------------DAGYMPYTEYVLRDLDQEAKE 186
KK + Y+P T YVL D+DQEAKE
Sbjct: 263 PKKLSTLPPKRRMGINMLDGRNRLVEYRLPPKIERKVVNEQRYVPDTRYVLHDIDQEAKE 322
Query: 187 KPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+ Y SERLA+AYGLISTP LRI KNLRICG+CHN IK +S I RE+IVRD
Sbjct: 323 QALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRD 378
>gi|125589603|gb|EAZ29953.1| hypothetical protein OsJ_14007 [Oryza sativa Japonica Group]
Length = 504
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 122/225 (54%), Gaps = 42/225 (18%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ P TF V+ AC A++E F +F++++RD+ I P +EH++GI+++ G+ + E
Sbjct: 262 GIAPTAHTFTLVLNACANSEAIEEAFLYFDAMSRDHGIEPGVEHYVGIIEVLGKSGHLNE 321
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS------------------ 161
A E+I + + + VWE+L A+ + L + + L +S
Sbjct: 322 AVEYIEKLPFEPTDTVWESLLNLARMNGDIDLEDRAEELLVSLDPTKVNPKKLPTPPPKR 381
Query: 162 ----------NK-----------KK---DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLA 197
NK KK + Y+P T YVL D+DQEAKE+ Y SERLA
Sbjct: 382 RLGINMLDGRNKLVEYRLPPKIEKKVVNEQRYVPDTRYVLHDIDQEAKEQALLYHSERLA 441
Query: 198 VAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+AYGLISTP LRI KNLRICG+CHN IK +S I RE+IVRD
Sbjct: 442 IAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRD 486
>gi|259490048|ref|NP_001159270.1| uncharacterized protein LOC100304360 [Zea mays]
gi|223943115|gb|ACN25641.1| unknown [Zea mays]
gi|413948667|gb|AFW81316.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
Length = 580
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 125/236 (52%), Gaps = 44/236 (18%)
Query: 51 EAGKRFE--NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIV 108
EA + FE + + P T++ V+ AC A++E +F++++RD+ I P +EH++GI+
Sbjct: 327 EALRLFELMKECMAPTSQTYLLVLNACANSEAIEEALLYFDAMSRDHGIEPGVEHYVGII 386
Query: 109 DLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
++ G+ + EA EFI + + +++VWE+L A+ + L + + L +S A
Sbjct: 387 EVLGKSGHLNEALEFIEKLPFEPNAMVWESLLNLARMNGDIDLEDRAEELLVSLDPSKAN 446
Query: 169 ------------------------------------------YMPYTEYVLRDLDQEAKE 186
Y+P T YVL D+DQEAKE
Sbjct: 447 PKKLPTPPPKRRLGINMLDGRNKLVEYRLPPKIEKKVVNEQRYVPDTRYVLHDIDQEAKE 506
Query: 187 KPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+ Y SERLA+AYGLISTP LRI KNLRICG+CHN IK +S I RE+IVRD
Sbjct: 507 QALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRD 562
>gi|293334013|ref|NP_001167864.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
gi|223944527|gb|ACN26347.1| unknown [Zea mays]
gi|413946729|gb|AFW79378.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
Length = 578
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 127/236 (53%), Gaps = 44/236 (18%)
Query: 51 EAGKRFE--NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIV 108
EA + FE + + P T++ V+ AC A++E +F+++ RD+ I P +EH++GI+
Sbjct: 325 EALRLFELMKECMSPTSHTYLLVLNACANSEAIEEALLYFDAMHRDHGIEPGVEHYVGII 384
Query: 109 DLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQ----------TEPGLLLGEPSSS- 157
++ G+ + EA EFI + + +++VWE+L A+ E L+ +PS S
Sbjct: 385 EVLGKSGHLNEALEFIEKLPFEPNAMVWESLLNLARMNGDIDLEDRAEELLVSLDPSKSN 444
Query: 158 ---LRLSNKKKDAG----------------------------YMPYTEYVLRDLDQEAKE 186
L K+ G Y+P T YVL D+DQEAKE
Sbjct: 445 HKKLPTPPPKRRLGINMLDGRNKLVEYRLPPKIEKKVVNEQRYVPDTRYVLHDIDQEAKE 504
Query: 187 KPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+ Y SERLA+AYGLISTP LRI KNLRICG+CHN IK +S I RE+IVRD
Sbjct: 505 QALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRD 560
>gi|296089822|emb|CBI39641.3| unnamed protein product [Vitis vinifera]
Length = 251
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 114/207 (55%), Gaps = 22/207 (10%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+ G+ + TFVGV++AC G V EG + FES+ Y + P EH+ +VDL GR +
Sbjct: 27 SSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLV 86
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL------------------- 158
+A + I+ M ++A +++W L +T + L E +
Sbjct: 87 NDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVEKRVHMFTGGVSTKHPELSSIMK 146
Query: 159 ---RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKK 215
+L ++AGY P + +VL D+D+E K + + SERLAVA+GL+ P G +R+ K
Sbjct: 147 MLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMK 206
Query: 216 NLRICGECHNFIKKLSSIENREIIVRD 242
NLR+CG+CH+ IK ++ I REII+RD
Sbjct: 207 NLRVCGDCHSAIKLIAKITGREIILRD 233
>gi|357447727|ref|XP_003594139.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483187|gb|AES64390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 120/239 (50%), Gaps = 50/239 (20%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+F+N G++P+ F+GV AC G + EG HFES+++DY I PT+ H++ +V++ +
Sbjct: 225 QFKNMGLKPDGQMFIGVFGACSMLGDISEGMLHFESMSKDYGIVPTMAHYVSLVEMIASI 284
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEK----YAQTE-------PGLLLGEPSSSLR---- 159
+ EA EFI M ++ + VW+TL + TE GLLLGE S ++
Sbjct: 285 GHLDEALEFIEKMPMEPNVEVWKTLMNSCRVHGNTELGDVKAKAGLLLGENSDLIKKNEQ 344
Query: 160 -----------------------------------LSNKKKDAGYMPYTEYVLRDLDQEA 184
L + K+ GY+ T Y L D+D+E
Sbjct: 345 NKLTINPKGQSRVHEFRNGDTSDPKSDKIYTLLRGLREQMKEDGYIAETRYALHDIDEEG 404
Query: 185 KEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
KE SERLAVA GL S+P T+R+ KN RIC +CH +K +S I RE+I++ K
Sbjct: 405 KEDVLLAHSERLAVAKGLFSSPARSTIRVIKNFRICPDCHTALKIISKIVGRELIIQAK 463
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 137/299 (45%), Gaps = 76/299 (25%)
Query: 20 EVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFG 79
+V D ++ IF + I + + ++ + E+ GV PN TFVG++ AC G
Sbjct: 605 KVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAG 664
Query: 80 AVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
VDEG+Q F+S++RDY + P LEH+ +VDL GR + A +FI +M I+ +V+W L
Sbjct: 665 LVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSAL 724
Query: 140 -----------------EKYAQTEPG-----LLLGEPSSSL---------------RLSN 162
EK TEP ++L SSL R +
Sbjct: 725 LGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVS 784
Query: 163 KKKDAGYMPY-------------------TEYVLRDL--------------------DQE 183
K+ +M +Y L+DL D+E
Sbjct: 785 KEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEE 844
Query: 184 AKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
KE Y SE+LAVAYGL+ TP G ++I KNLRICG+CH FIK +S + R+I +RD
Sbjct: 845 QKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRD 903
>gi|217073734|gb|ACJ85227.1| unknown [Medicago truncatula]
Length = 452
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 113/220 (51%), Gaps = 53/220 (24%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K+ GV P+ TF V+ C V+EG FES+ ++Y I P +EH+LG+V+++G
Sbjct: 189 KQMRQQGVVPDEETFALVLAVCALVDGVEEGLMQFESM-KEYGIVPGMEHYLGVVNIFGC 247
Query: 114 LQKIAEAREFIRNMQIDASSVVWET----------LEKYAQTEPGLLLGEPSSS------ 157
++ EA EFI NM I+A +WET LE+ + L + +PS +
Sbjct: 248 AGRLDEAHEFIENMPIEAGVELWETLRNFARIHGDLEREDCADELLTVLDPSKAAADKVP 307
Query: 158 -----------------------------------LR-LSNKKKDAGYMPYTEYVLRDLD 181
LR L+ + ++AGY+P T YVL D+D
Sbjct: 308 LPQRKKQSAINMLEEKNRVSEYRCNMPYKEEGDVKLRGLTGQMREAGYVPDTRYVLHDID 367
Query: 182 QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+E KEK Y SERLA+AYGLISTPP TLRI KNLRICG
Sbjct: 368 EEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICG 407
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N H +E V LE+M + G F D D + LL +C DLK LE GKR R
Sbjct: 72 NVNFAHFLQEGNVNQVLELMGQ----GAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRR 127
Query: 63 PNWSTFVGVITAC 75
S F G + C
Sbjct: 128 ---SKFGGNVELC 137
>gi|356528308|ref|XP_003532746.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Glycine max]
Length = 664
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 67/255 (26%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+F+N G++P+ F+GV+ ACG G +DEG QHFES+ +DY I P++ HF+ +VD+ G +
Sbjct: 392 QFKNLGLKPDGQMFIGVLFACGMLGDIDEGMQHFESMNKDYGIVPSMTHFVSVVDMIGSI 451
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL------RLSNKKKDAG 168
+ EA EFI M + S+ +WETL + LG+ + L N++ AG
Sbjct: 452 GHLDEAFEFIEKMPMKPSADIWETLMNLCRVHGNTGLGDCCAELVEQLDSSCLNEQSKAG 511
Query: 169 YMPYT--------------------------EY---------------VLRDLDQEAKEK 187
+P EY +LR L + KE
Sbjct: 512 LVPVKASDLTKEKEKRTLTNKNLLEVRSRVREYRAGDTFHPESDKIYALLRGLKSQMKEA 571
Query: 188 ---PQT-----------------YRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
P+T SERLA+AYGL+++P +R+ KNLR+CG+CH +
Sbjct: 572 GYVPETKFVLHDIDQEGKEEALLAHSERLAIAYGLLNSPARAPMRVIKNLRVCGDCHTAL 631
Query: 228 KKLSSIENREIIVRD 242
K +S + RE+I+RD
Sbjct: 632 KIISKLVGRELIIRD 646
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 127/266 (47%), Gaps = 77/266 (28%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+ +++G++P+ TF+GV++AC G E +++F+++ + Y I P +EH+ +VD GR
Sbjct: 1290 RTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGR 1349
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL----------EKYAQTEPGLLLGEPSSS------ 157
+I EA I +M AS+ ++ L E + LL +PS S
Sbjct: 1350 AGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLL 1409
Query: 158 -------------------LRLSNKKKDAG------------------------------ 168
++L N KKD G
Sbjct: 1410 SNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKI 1469
Query: 169 ------------YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKN 216
Y+P T++ L D+++E KE+ Y SE+LA+A+GLISTPP T+R+ KN
Sbjct: 1470 EDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKN 1529
Query: 217 LRICGECHNFIKKLSSIENREIIVRD 242
LR+CG+CH+ IK +S + REI++RD
Sbjct: 1530 LRVCGDCHSAIKCISKLTQREIVLRD 1555
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLG--IVDLYGRLQK 116
GV+P+ TF +I A C A+++G Q H V DY +L+HF+G +VD+Y +
Sbjct: 1195 GVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY----SLDHFVGTSLVDMYCKCGS 1250
Query: 117 IAEAREFIRNMQIDASSVVWETL 139
+ +A R M + V W +
Sbjct: 1251 VQDAYRVFRKMDV-RKVVFWNAM 1272
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 127/266 (47%), Gaps = 77/266 (28%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+ +++G++P+ TF+GV++AC G E +++F+++ + Y I P +EH+ +VD GR
Sbjct: 1290 RTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGR 1349
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL----------EKYAQTEPGLLLGEPSSS------ 157
+I EA I +M AS+ ++ L E + LL +PS S
Sbjct: 1350 AGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLL 1409
Query: 158 -------------------LRLSNKKKDAG------------------------------ 168
++L N KKD G
Sbjct: 1410 SNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKI 1469
Query: 169 ------------YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKN 216
Y+P T++ L D+++E KE+ Y SE+LA+A+GLISTPP T+R+ KN
Sbjct: 1470 EDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKN 1529
Query: 217 LRICGECHNFIKKLSSIENREIIVRD 242
LR+CG+CH+ IK +S + REI++RD
Sbjct: 1530 LRVCGDCHSAIKCISKLTQREIVLRD 1555
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLG--IVDLYGRLQK 116
GV+P+ TF +I A C A+++G Q H V DY +L+HF+G +VD+Y +
Sbjct: 1195 GVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY----SLDHFVGTSLVDMYCKCGS 1250
Query: 117 IAEAREFIRNMQIDASSVVWETL 139
+ +A R M + V W +
Sbjct: 1251 VQDAYRVFRKMDV-RKVVFWNAM 1272
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 119/264 (45%), Gaps = 76/264 (28%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
R + G++PN TFVG+I AC G V +G F S+ +DY INP+L+H+ ++DL R
Sbjct: 329 RMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRS 388
Query: 115 QKIAEAREFIRNM----------------------------------------------- 127
+ EA I+ M
Sbjct: 389 GHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLS 448
Query: 128 QIDASSVVWETLEKY--------AQTEPG------------LLLGEPSSSLR-------- 159
I AS+ +WE++ K + EPG L GE S +
Sbjct: 449 NIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGLLE 508
Query: 160 -LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
L + K GY+P T VL DL+Q+ KE+ + SERLAVAYGL+ PG L I KNLR
Sbjct: 509 ELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSERLAVAYGLLKGIPGMVLHIVKNLR 568
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH +K +S I REI+VRD
Sbjct: 569 VCGDCHTVLKFISIIVKREIVVRD 592
>gi|218198170|gb|EEC80597.1| hypothetical protein OsI_22944 [Oryza sativa Indica Group]
Length = 563
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 120/238 (50%), Gaps = 45/238 (18%)
Query: 50 LEAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
+EA K F+ ++G RPN T VGV+ AC G V++G+ +F S+ + + I P EH
Sbjct: 308 IEALKVFDMMKSEGPRPNHITMVGVLFACSHAGLVEDGWYYFSSMEKLFGIQPEREHCNC 367
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL------------EKYAQTE-------- 146
+VDL GR K+ +A +FI M SV+W TL YA E
Sbjct: 368 MVDLLGRAGKLDDAVKFIHEMNFQPDSVIWRTLLGACRMHKNADLAAYAAKEILRLEPDD 427
Query: 147 ------------------PGLLLGEPSSSL----RLSNKKKDAGYMPYTEYVLRDLDQEA 184
PG E S + RL ++ + GY P TE+VL+DL E
Sbjct: 428 QDAEKSWKMMRDRGVKKDPGRSWIELESIIQELSRLFSRVTNLGYTPQTEFVLQDLATEQ 487
Query: 185 KEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
KE Y SE+LA+A+G ++ G+ +RI KNLRICG+CH F K +S E + II+RD
Sbjct: 488 KEDLLKYHSEKLAIAFGTMNAMEGKPIRIMKNLRICGDCHAFAKLVSKSEGKVIIIRD 545
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 127/269 (47%), Gaps = 76/269 (28%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+ K ++ GV P+ TF+GV++AC G V E +++F S+ ++Y I P +EH+ +VD
Sbjct: 1325 LQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVD 1384
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL----------EKYAQTEPGLLLGEPSSS-- 157
R +I EA + I +M +AS+ ++ TL E + LL EPS S
Sbjct: 1385 ALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAA 1444
Query: 158 -----------------------LRLSNKKKDAG-------------------------- 168
+R N KKD G
Sbjct: 1445 YVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVI 1504
Query: 169 ---------------YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
Y+P T++ L D+++E KE Y SE+LA+AYGL+ TPP TLR+
Sbjct: 1505 YNKVEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRV 1564
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRD 242
KNLR+CG+CH+ IK +S + REI++RD
Sbjct: 1565 IKNLRVCGDCHSAIKYISKVFKREIVLRD 1593
>gi|222636729|gb|EEE66861.1| hypothetical protein OsJ_23658 [Oryza sativa Japonica Group]
Length = 728
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 111/194 (57%), Gaps = 3/194 (1%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
+E +R + + PN T VGV++AC G V EG +F+ + +Y I P++EH+ IVD
Sbjct: 434 IELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVD 493
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
LYGR + +A+ FI I+ ++VW+TL + + + +L + K+ GY
Sbjct: 494 LYGRSGLLDKAKNFIEENNINHEAIVWKTLLNASNQQSAEIYAYLE---KLVERLKEIGY 550
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKK 229
T+ V+ D++ E +E + SE+LA+A+G+ISTP G LRI KNLR+C +CH IK
Sbjct: 551 TSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEAIKY 610
Query: 230 LSSIENREIIVRDK 243
+S R + DK
Sbjct: 611 ISLATGRCWVNPDK 624
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 122/259 (47%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV P+ TF+GV++AC G V E +++F S+ + Y I P +EH+ +VD R +I E
Sbjct: 1306 GVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIRE 1365
Query: 120 AREFIRNMQIDASSVVWETL----------EKYAQTEPGLLLGEPSSS------------ 157
A + I +M +AS+ ++ TL E + LL EPS S
Sbjct: 1366 AEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAA 1425
Query: 158 -------------LRLSNKKKDAG------------------------------------ 168
+R +N KKD G
Sbjct: 1426 ANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKR 1485
Query: 169 -----YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
Y+P T++ L D+++E KE Y SE+LA+AYGL+ TPP TLR+ KNLR+CG+C
Sbjct: 1486 IREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDC 1545
Query: 224 HNFIKKLSSIENREIIVRD 242
HN IK +S + RE+++RD
Sbjct: 1546 HNAIKYISKVFEREVVLRD 1564
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 117/259 (45%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV+PN TFVG+I AC G V +G F ++ D+ I+P+L+H+ ++DL+ R + E
Sbjct: 335 GVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDE 394
Query: 120 AREFIRNMQID-----------------------------------------------AS 132
A IR M ++ A
Sbjct: 395 AENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLSNIYAG 454
Query: 133 SVVWETLEKY--------AQTEPG------------LLLGEPSSSLR---------LSNK 163
+ +WE + K A+ PG GE S +R L +
Sbjct: 455 AGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPMRDEIIGLMRELDEE 514
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
+ GY P T VL D+DQ+ KE+ + SERLAVAYGL+ PG +RI KNLR+CG+C
Sbjct: 515 MRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRVCGDC 574
Query: 224 HNFIKKLSSIENREIIVRD 242
H +K +S+I NREI VRD
Sbjct: 575 HTVLKLISAITNREIYVRD 593
>gi|296082000|emb|CBI21005.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 144/308 (46%), Gaps = 70/308 (22%)
Query: 5 ELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND---GV 61
E+ C++ +VK A+EV+ L+ +D P + L+ C + K L+ K V
Sbjct: 351 EVDDFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRLMKACGEAKALQEAKAVHESLIKSV 410
Query: 62 RP-NWSTFVGVITACGCFGAVDEGFQHFESVT--------------------------RD 94
P ST+ ++ G++D+ + F+ + +D
Sbjct: 411 SPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNLTSWDTMITWFAKNDLGEEAIDLKD 470
Query: 95 YDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLG-- 152
Y I P+++H+ +VD+ G + EA EF+ M ++ S VWETL + + + +G
Sbjct: 471 YGIVPSMKHYASMVDMLGNSGYLDEALEFVEKMPLEPSVDVWETLMNICRVQGNMEIGDR 530
Query: 153 --------EPS-----------------------------SSLR-LSNKKKDAGYMPYTE 174
EPS + LR L + K+AGY+P T
Sbjct: 531 CAELVEHLEPSRLTEQSKVRSRVHEYRAGDTSHPENDKIYAKLRGLKAQMKEAGYVPETR 590
Query: 175 YVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIE 234
+VL D+DQE KE+ SERLAVAYGL+S+P +R+ KNLR+CG+CH +K +S +
Sbjct: 591 FVLHDIDQEGKEEALLAHSERLAVAYGLLSSPARSPIRVIKNLRVCGDCHTALKIISKLV 650
Query: 235 NREIIVRD 242
RE+I+RD
Sbjct: 651 GRELIIRD 658
>gi|297800868|ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
gi|297314154|gb|EFH44577.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 141/320 (44%), Gaps = 78/320 (24%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + + +V AA ++ ++++ + + I+ + K L + GV+
Sbjct: 214 NALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDEMVSHGVK 273
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN TFVG+I AC G V +G + F+S+T+DY I P+L+H+ ++DL GR + EA
Sbjct: 274 PNEVTFVGLIYACSHVGFVAKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAEN 333
Query: 123 FIRNMQIDASSVVWETL----EKYAQTEPGLLLG----------EPSSSLRLSN------ 162
I M W L ++ Q + G+ + +PS+ + LSN
Sbjct: 334 LIHTMPFPPDEPTWAALLSACKRQGQGQMGVRIADHLVSSFKPKDPSTYILLSNIYASAS 393
Query: 163 ----------------KKKDAGY------------------------------------- 169
+KD GY
Sbjct: 394 LWGKVSEARRKLGDMEVRKDPGYSSVEVRKETEVFYAGETSHALKEDIFRLLKKLEEEMR 453
Query: 170 -----MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
+P T ++L D+D++ KEK + SER AVAYGL+ PG +RI KNLR+CG+CH
Sbjct: 454 IRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCH 513
Query: 225 NFIKKLSSIENREIIVRDKT 244
+K +S I REIIVRD T
Sbjct: 514 VVLKHISEITEREIIVRDAT 533
>gi|357501247|ref|XP_003620912.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495927|gb|AES77130.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 415
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 130/267 (48%), Gaps = 58/267 (21%)
Query: 15 VKAALEVMDKL--KNIGIFLDSPDIIELLNV-CMDLKLLEAGKRFENDGVRPNWSTFVGV 71
VK A +V DK+ +N+G + +I NV + + L K+ G+ P+ TF V
Sbjct: 150 VKDARKVFDKMPDRNVGSW---NLMIGGYNVNGLGIDGLLVFKQMRQQGIVPDEETFALV 206
Query: 72 ITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNM---- 127
+ C V+EG +EH+LG+V+++G ++ EA EFI N+
Sbjct: 207 LAVCALVDGVEEG----------------MEHYLGVVNIFGCAGRLNEAHEFIENIIHGD 250
Query: 128 ------------QIDASSVVWETLEKYAQTEPGLLLG-------------------EPSS 156
ID S + Q + + E
Sbjct: 251 LEREDCADELLTVIDPSKAAADDKVPLPQRKKQSAINMMEEKNRVSEYRCNMPYEEEDDE 310
Query: 157 SLR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKK 215
LR L+ + ++AGY+P T YVL D+D+E KEK Y SE LA+AYGLISTPP TLRI K
Sbjct: 311 KLRGLTGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSECLAIAYGLISTPPRTTLRIIK 370
Query: 216 NLRICGECHNFIKKLSSIENREIIVRD 242
NLRICG+CHN IK +S I RE+IVRD
Sbjct: 371 NLRICGDCHNAIKIMSKIVGRELIVRD 397
>gi|297846982|ref|XP_002891372.1| hypothetical protein ARALYDRAFT_473903 [Arabidopsis lyrata subsp.
lyrata]
gi|297337214|gb|EFH67631.1| hypothetical protein ARALYDRAFT_473903 [Arabidopsis lyrata subsp.
lyrata]
Length = 415
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 72/83 (86%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + +DAGY+P T+YVL D+D+EAKEK + SERLA+A+GLI+TPPG T+R+ KNLRI
Sbjct: 315 LAKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGLINTPPGTTIRVMKNLRI 374
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHNFIK LSSIE+REIIVRD
Sbjct: 375 CGDCHNFIKILSSIEDREIIVRD 397
>gi|5668803|gb|AAD46029.1|AC007519_14 F16N3.14 [Arabidopsis thaliana]
Length = 571
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 71/83 (85%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + +DAGY+P T+YVL D+D+EAKEK + SERLA+A+G+I+TPPG T+R+ KNLRI
Sbjct: 471 LGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKNLRI 530
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHNFIK LSSIE+REIIVRD
Sbjct: 531 CGDCHNFIKILSSIEDREIIVRD 553
>gi|334183116|ref|NP_175189.2| putative lipoyltransferase [Arabidopsis thaliana]
gi|193806408|sp|P0C7R1.1|PPR74_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g47580, chloroplastic; Flags: Precursor
gi|332194069|gb|AEE32190.1| putative lipoyltransferase [Arabidopsis thaliana]
Length = 239
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 71/83 (85%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + +DAGY+P T+YVL D+D+EAKEK + SERLA+A+G+I+TPPG T+R+ KNLRI
Sbjct: 139 LGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKNLRI 198
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHNFIK LSSIE+REIIVRD
Sbjct: 199 CGDCHNFIKILSSIEDREIIVRD 221
>gi|357501057|ref|XP_003620817.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495832|gb|AES77035.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 371
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 133/268 (49%), Gaps = 59/268 (22%)
Query: 15 VKAALEVMDKL--KNIGIFLDSPDIIELLNV-CMDLKLLEAGKRFENDGVRPNWSTFVGV 71
VK A +V DK+ +N+G + +I NV + + L K+ G+ P+ TF V
Sbjct: 105 VKDARKVFDKMPDRNVGSW---NLMIGGYNVNGLGIDGLLVFKQMRQQGIVPDEETFALV 161
Query: 72 ITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDA 131
+ C V+EG +EH+LG+V+++G + EA+EFI NM I+A
Sbjct: 162 LAVCALVDGVEEG----------------MEHYLGVVNIFGCAGPLDEAQEFIENMPIEA 205
Query: 132 SSVVWETLEKYAQ----------TEPGLLLGEPSSS-----LRLSNKKKDAGYMPYTE-- 174
VWETL +A+ + L + +PS + + L +KK + E
Sbjct: 206 GVDVWETLRNFARIYGDLEREDRADELLTVRDPSKAAADDKVPLPQRKKQSAINMLEEKN 265
Query: 175 ---------------YVLRD-----LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIK 214
+++RD L + +EK Y SERLA+AYGLISTPP LRI
Sbjct: 266 RVSEYRCNILGKQVMFLIRDTYSMILMRRKREKALRYHSERLAIAYGLISTPPRTMLRII 325
Query: 215 KNLRICGECHNFIKKLSSIENREIIVRD 242
KNLRICG+CHN IK +S I RE+IVRD
Sbjct: 326 KNLRICGDCHNAIKIMSKIVGRELIVRD 353
>gi|296090396|emb|CBI40215.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 103/195 (52%), Gaps = 41/195 (21%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA K FE +G+ P+ +F+GV+ AC G VDEG+ HF S+T+ Y I P + H+ +
Sbjct: 479 EAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCM 538
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VDL GR ++EA I NM + SV+WE LLG + R+
Sbjct: 539 VDLLGRAGYLSEAEALIENMPVKPDSVIWEA-----------LLG----ACRIH------ 577
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
+ Y SE+LAV +G++STP G ++I KNLRICG+CH F+
Sbjct: 578 -----------------RNNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFM 620
Query: 228 KKLSSIENREIIVRD 242
K +S + R+II+RD
Sbjct: 621 KFMSKVTLRKIIIRD 635
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 119/260 (45%), Gaps = 76/260 (29%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
DGV PN T V V+ AC G V+EG Q+FE + + I PT EH+ ++DL GR K+
Sbjct: 581 DGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLN 640
Query: 119 EAREFIRNM-----------------------------------------------QIDA 131
EA E + ++ I A
Sbjct: 641 EAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYA 700
Query: 132 SSVVWETLEKY--------AQTEPGL------------LLGEPSSSL---------RLSN 162
S+ +WE + K + EPG+ ++G+ S S +L +
Sbjct: 701 SAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGD 760
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
AGY E + ++D+ KEK + SE+LAVA+GLI+TPPG +R+KKNLRIC +
Sbjct: 761 LLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVD 820
Query: 223 CHNFIKKLSSIENREIIVRD 242
CH F K + I +REIIVRD
Sbjct: 821 CHTFFKFVCKIVSREIIVRD 840
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 14/128 (10%)
Query: 28 IGIFLD--SPDIIE--------LLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGC 77
+ +F D PD++ +L+ C DL L+ + G RPN T + AC
Sbjct: 238 VAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLL-DEMKGSGTRPNMFTLSSALKACAA 296
Query: 78 FGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWE 137
G + G Q S+ + D + L +G+VD+Y + + + +AR +M + W
Sbjct: 297 MGFKELGRQLHSSLIK-MDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDIIAWN 354
Query: 138 TL-EKYAQ 144
L Y+Q
Sbjct: 355 ALISGYSQ 362
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 137/316 (43%), Gaps = 76/316 (24%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + R ++AA +V +++++ + + I + LE + G +
Sbjct: 164 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 223
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN T+V V++AC G + EG +HF S+ +++ I P +EH+ +VDL GR + EA E
Sbjct: 224 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 283
Query: 123 FIRNMQIDASSVVWETL----EKYAQTEPGLLLGE---------PSSSLRLSNKKKDAGY 169
FI +M + A ++VW TL + TE G E P++ + LSN AG
Sbjct: 284 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 343
Query: 170 M----------------------------------------PYTEYVLRDLDQ------- 182
P + ++LDQ
Sbjct: 344 WKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKE 403
Query: 183 ----------------EAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
E KE+ SE++AVA+GLIST + +RI KNLR+CG+CH
Sbjct: 404 MGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTA 463
Query: 227 IKKLSSIENREIIVRD 242
IK +S REI+VRD
Sbjct: 464 IKYISMATGREIVVRD 479
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 137/317 (43%), Gaps = 76/317 (23%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + R ++AA +V +++++ + + I + LE + G +
Sbjct: 476 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 535
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN T+V V++AC G + EG +HF S+ +++ I P +EH+ +VDL GR + EA E
Sbjct: 536 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 595
Query: 123 FIRNMQIDASSVVWETL----EKYAQTEPGLLLGE---------PSSSLRLSNKKKDAGY 169
FI +M + A ++VW TL + TE G E P++ + LSN AG
Sbjct: 596 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 655
Query: 170 M----------------------------------------PYTEYVLRDLDQ------- 182
P + ++LDQ
Sbjct: 656 WKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKE 715
Query: 183 ----------------EAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
E KE+ SE++AVA+GLIST + +RI KNLR+CG+CH
Sbjct: 716 MGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTA 775
Query: 227 IKKLSSIENREIIVRDK 243
IK +S REI+VRD
Sbjct: 776 IKYISMATGREIVVRDS 792
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 137/316 (43%), Gaps = 76/316 (24%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + R ++AA +V +++++ + + I + LE + G +
Sbjct: 296 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 355
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN T+V V++AC G + EG +HF S+ +++ I P +EH+ +VDL GR + EA E
Sbjct: 356 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 415
Query: 123 FIRNMQIDASSVVWETL----EKYAQTEPGLLLGE---------PSSSLRLSNKKKDAGY 169
FI +M + A ++VW TL + TE G E P++ + LSN AG
Sbjct: 416 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 475
Query: 170 M----------------------------------------PYTEYVLRDLDQ------- 182
P + ++LDQ
Sbjct: 476 WKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKE 535
Query: 183 ----------------EAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
E KE+ SE++AVA+GLIST + +RI KNLR+CG+CH
Sbjct: 536 MGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTA 595
Query: 227 IKKLSSIENREIIVRD 242
IK +S REI+VRD
Sbjct: 596 IKYISMATGREIVVRD 611
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 137/316 (43%), Gaps = 76/316 (24%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + R ++AA +V +++++ + + I + LE + G +
Sbjct: 301 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 360
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN T+V V++AC G + EG +HF S+ +++ I P +EH+ +VDL GR + EA E
Sbjct: 361 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 420
Query: 123 FIRNMQIDASSVVWETL----EKYAQTEPGLLLGE---------PSSSLRLSNKKKDAGY 169
FI +M + A ++VW TL + TE G E P++ + LSN AG
Sbjct: 421 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 480
Query: 170 M----------------------------------------PYTEYVLRDLDQ------- 182
P + ++LDQ
Sbjct: 481 WKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKE 540
Query: 183 ----------------EAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
E KE+ SE++AVA+GLIST + +RI KNLR+CG+CH
Sbjct: 541 MGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTA 600
Query: 227 IKKLSSIENREIIVRD 242
IK +S REI+VRD
Sbjct: 601 IKYISMATGREIVVRD 616
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 137/317 (43%), Gaps = 76/317 (23%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + R ++AA +V +++++ + + I + LE + G +
Sbjct: 494 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 553
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN T+V V++AC G + EG +HF S+ +++ I P +EH+ +VDL GR + EA E
Sbjct: 554 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 613
Query: 123 FIRNMQIDASSVVWETL----EKYAQTEPGLLLGE---------PSSSLRLSNKKKDAGY 169
FI +M + A ++VW TL + TE G E P++ + LSN AG
Sbjct: 614 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 673
Query: 170 M----------------------------------------PYTEYVLRDLDQ------- 182
P + ++LDQ
Sbjct: 674 WKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKE 733
Query: 183 ----------------EAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
E KE+ SE++AVA+GLIST + +RI KNLR+CG+CH
Sbjct: 734 MGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTA 793
Query: 227 IKKLSSIENREIIVRDK 243
IK +S REI+VRD
Sbjct: 794 IKYISMATGREIVVRDS 810
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 126/271 (46%), Gaps = 79/271 (29%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA + FE G +P+ TFVGV++AC G VD+G +F S+ Y + T +H+ I
Sbjct: 388 EAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACI 447
Query: 108 VDLYGR--------------------------------------LQKIAEA--------- 120
+DL R Q+ AEA
Sbjct: 448 IDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENP 507
Query: 121 REFIRNMQIDASSVVWETLEKYAQT--------EPGL------------LLGEPSSSL-- 158
++ I A++ +W + K +T +PGL L+G+ S
Sbjct: 508 ATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSK 567
Query: 159 -------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
+LS + K+ G++P T +VL D++ E KE+ +Y SE+LAVA+G+ISTP G +
Sbjct: 568 EINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPI 627
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRD 242
++ KNLR C +CH IK +S I NR+IIVRD
Sbjct: 628 KVFKNLRTCVDCHTAIKFISKITNRKIIVRD 658
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 123/262 (46%), Gaps = 76/262 (29%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
DG+ PN +F+G++TAC G VD+G ++F+ + + Y I P +EH+ +VDL R ++
Sbjct: 355 DGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLD 414
Query: 119 EAREFIRNMQID---------------------ASSVVWETLE--------------KYA 143
+A I +M + VVW LE YA
Sbjct: 415 QAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYA 474
Query: 144 QT--------------------EPG------------LLLGEPS--SSLRLSN------- 162
PG +G+ S SLR+ +
Sbjct: 475 SMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKW 534
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
K K AGY P T+ V+ ++D+E KE + SE+LA+A+GLI+T G T+RI KNLR+C +
Sbjct: 535 KMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCND 594
Query: 223 CHNFIKKLSSIENREIIVRDKT 244
CH+ IK +S I REI+VRD++
Sbjct: 595 CHDAIKIISKIVEREIVVRDRS 616
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 121/262 (46%), Gaps = 76/262 (29%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
N+G +P+ TFVGV++AC G V+ G ++F S+ +DY I+P L+H+ ++DL R K
Sbjct: 458 NEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKF 517
Query: 118 AEAREFIRNMQIDASSVVWETLEK----YAQTEPG------LLLGEPSSS---LRLSNKK 164
EA+ + NM+++ +W +L + Q E G L EP +S + LSN
Sbjct: 518 DEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIY 577
Query: 165 KDAG----------------------------------------YMPYTEYVLRDL---- 180
AG + P +E + R L
Sbjct: 578 AGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVD 637
Query: 181 -------------------DQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
D+E KE T SE+LA+A+GLIST PG T+RI KNLR+C
Sbjct: 638 RLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCR 697
Query: 222 ECHNFIKKLSSIENREIIVRDK 243
CH+ K +S I NREII RD+
Sbjct: 698 NCHSATKLISKIFNREIIARDR 719
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
R + V PN ST V V++ACG +++ G + S RD L+ +VD+Y +
Sbjct: 249 RMQEADVSPNQSTMVSVLSACGHLRSLELG-KWIGSWVRDRGFGKNLQLVNALVDMYSKC 307
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
+I AR+ M+ D ++W T+
Sbjct: 308 GEIGTARKLFDGME-DKDVILWNTM 331
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 125/273 (45%), Gaps = 76/273 (27%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L + N ++P+W TFV VI AC G VD G Q+F+S+ +++ I H+ +
Sbjct: 379 KALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCV 438
Query: 108 VD-------------------------LYG------RLQKIAEAREFI-RNM-------- 127
+D +YG R+ K + EF RN+
Sbjct: 439 IDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSA 498
Query: 128 -------QIDASSVVWETLEK---------------YAQTEPGLLLGEPSSSLRLS---- 161
I A++ W+ + K Y+ E + E SS RL
Sbjct: 499 TGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELT 558
Query: 162 ----------NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
K K AGY+P E+ L D+++E KEK + SE+LA+A+GL+ T PG +
Sbjct: 559 SIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPI 618
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
R+ KNLR+CG+CH IK +S+IE REIIVRD T
Sbjct: 619 RVFKNLRVCGDCHRAIKFISAIEKREIIVRDTT 651
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 125/273 (45%), Gaps = 76/273 (27%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L + N ++P+W TFV VI AC G VD G Q+F+S+ +++ I H+ +
Sbjct: 379 KALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCV 438
Query: 108 VD-------------------------LYG------RLQKIAEAREFI-RNM-------- 127
+D +YG R+ K + EF RN+
Sbjct: 439 IDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSA 498
Query: 128 -------QIDASSVVWETLEK---------------YAQTEPGLLLGEPSSSLRLS---- 161
I A++ W+ + K Y+ E + E SS RL
Sbjct: 499 TGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELT 558
Query: 162 ----------NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
K K AGY+P E+ L D+++E KEK + SE+LA+A+GL+ T PG +
Sbjct: 559 SIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPI 618
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
R+ KNLR+CG+CH IK +S+IE REIIVRD T
Sbjct: 619 RVFKNLRVCGDCHRAIKFISAIEKREIIVRDTT 651
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 124/272 (45%), Gaps = 76/272 (27%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
+K L+ K + V+ + TF+GV AC G V+EG ++F+ + RD I PT EH
Sbjct: 582 MKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSC 641
Query: 107 IVDLYG-------------------------------RLQKIAE-----AREFIRNMQID 130
+VDLY R+ K E A + I + D
Sbjct: 642 MVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPED 701
Query: 131 ASSVV-----------WETL--------EKYAQTEPG------------LLLGEPSSSLR 159
+++ V W+ E+ + EPG L G+ S L+
Sbjct: 702 SAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLK 761
Query: 160 ---------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
LS + KD GY P T YVL+D+D E KE SERLA+A+GLI+TP G
Sbjct: 762 DQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSP 821
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
L I KNLR+CG+CH IK ++ IE REI+VRD
Sbjct: 822 LLIIKNLRVCGDCHVVIKLIAKIEEREIVVRD 853
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 79/271 (29%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA K FE + G +PN+ T VGV+ AC G +++G+ +F S+ + Y INP EH+ +
Sbjct: 294 EALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCM 353
Query: 108 VDLYGRLQKIAEAREFI----------------------RNM------------------ 127
+DL G+ K+ +A + + RNM
Sbjct: 354 IDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDA 413
Query: 128 -------QIDASSVVWETLEKY--------AQTEPG------------LLLGEPSSSLRL 160
I A+S W+++E+ + EPG ++G+ S +
Sbjct: 414 GTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIV 473
Query: 161 SNKKK---------DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
KK GY+P T +VL+DL+ E E + SE+LA+A+GL++ P + +
Sbjct: 474 EVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPSEKVI 533
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRD 242
RI+KNLRICG+CH F K S +ENR I++RD
Sbjct: 534 RIRKNLRICGDCHVFCKLASKLENRNIVIRD 564
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 120/260 (46%), Gaps = 76/260 (29%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
VRPN TFVGV+ AC G VD G + FES+ + I P +EH+ +VD+ GR+ ++ EA
Sbjct: 354 VRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEA 413
Query: 121 REFIRNM------------------------------------QIDASSVV-----WETL 139
+FI M +ID+ S + + +L
Sbjct: 414 FDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGSFIMLSNFYASL 473
Query: 140 EKYA-------QTEPGLLLGEPS-SSLRLSNK---------------------------K 164
+++ + E G ++ EP SS+ ++N
Sbjct: 474 GRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIYKKLEELNYLT 533
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K GY+P TE L D+D E KE SERLA+ YGL+ST TLR+ KNLRIC +CH
Sbjct: 534 KFEGYLPATEVALHDIDDEQKELALAVHSERLAICYGLVSTEAYTTLRVGKNLRICDDCH 593
Query: 225 NFIKKLSSIENREIIVRDKT 244
IK ++ I R+I+VRD+
Sbjct: 594 AMIKLIAKITRRKIVVRDRN 613
>gi|449488164|ref|XP_004157956.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 458
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 30/251 (11%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG----KRFEND-GVRPNWSTFVGVI 72
L + +++KN+G+ +S + +L C + ++ G K N+ G+ P ++GV+
Sbjct: 194 GLALFEQMKNVGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEYGINPEIEHYLGVV 253
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD---LYGRLQKIAEAREFIRNMQI 129
G G + E + E + INPT + + + + L+G ++ A E + ++
Sbjct: 254 DVLGKSGHLIEAEEFIEKMP----INPTAKIWDALRNYARLHGNMELEDRAEELMFSLDP 309
Query: 130 DASSVVWETLEKYAQTEPGLLLGEPSSSLR------------------LSNKKKDAGYMP 171
+S + + + + E +R L+ + ++AGY+P
Sbjct: 310 STTSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNGQMREAGYVP 369
Query: 172 YTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLS 231
T YVL D+D+EAK++ Y SERLA+AYGLISTP TLRI KNLRICG+CHN IK +S
Sbjct: 370 DTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMS 429
Query: 232 SIENREIIVRD 242
I RE+IVRD
Sbjct: 430 KIVGRELIVRD 440
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 146/316 (46%), Gaps = 76/316 (24%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + C+ ++ AL V +++K + S I L + L+ +R ++ G +
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN+ T VGV+ AC G +++G+ +F S+ + Y I+P EH+ ++DL G+ K+ +A +
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVK 416
Query: 123 FI----------------------RNM-------------------------QIDASSVV 135
+ RNM I A+S
Sbjct: 417 LLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQK 476
Query: 136 WETLEKY--------AQTEPG------------LLLGEPSSSLRLSNKKK---------D 166
W+++E+ + EPG ++G+ S + KK
Sbjct: 477 WDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTG 536
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
GY+P T +VL+DL+ E E + SE+LA+A+GL++ P + +RI+KNLRICG+CH F
Sbjct: 537 IGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVF 596
Query: 227 IKKLSSIENREIIVRD 242
K S +E R I++RD
Sbjct: 597 CKLASKLEIRSIVIRD 612
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG----KRFE 57
L SE LC +R++ A++ MD L++ G++ DS EL+ C+ + + G +
Sbjct: 29 LLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLY 88
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPT 100
+G RP +I F +++ Q F+ + + I+ T
Sbjct: 89 FNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWT 131
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV P+ TF+GV++AC G + +++F+S+ + Y + P +EH+ +VD R I E
Sbjct: 697 GVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQE 756
Query: 120 AREFIRNMQIDASSVVWETL----------EKYAQTEPGLLLGEPSSS------------ 157
A + + +M +AS+ ++ TL E + L +PS S
Sbjct: 757 AEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAA 816
Query: 158 -------------LRLSNKKKDAGY-----------------------MPY--TEYVLRD 179
++ N KK+ G+ + Y EYV++
Sbjct: 817 ANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKR 876
Query: 180 LDQEA----------------KEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
+ +E KE +Y SE+LA+AYGL+ TPP TLR+ KNLR+CG+C
Sbjct: 877 IKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDC 936
Query: 224 HNFIKKLSSIENREIIVRD 242
HN IK +S++ REI++RD
Sbjct: 937 HNAIKYISNVFQREIVLRD 955
>gi|449446817|ref|XP_004141167.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Cucumis sativus]
Length = 458
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 129/251 (51%), Gaps = 30/251 (11%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG----KRFEND-GVRPNWSTFVGVI 72
L + +++KN G+ +S + +L C + ++ G K N+ G+ P ++GV+
Sbjct: 194 GLALFEQMKNAGLQPNSETFLVVLAACAMAEAVKEGVFYFKIMANEYGINPEIEHYLGVV 253
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD---LYGRLQKIAEAREFIRNMQI 129
G G + E + E + INPT + + + + L+G ++ A E + ++
Sbjct: 254 DVLGKSGHLIEAEEFIEKMP----INPTAKIWDALRNYARLHGNMELEDRAEELMFSLDP 309
Query: 130 DASSVVWETLEKYAQTEPGLLLGEPSSSLR------------------LSNKKKDAGYMP 171
+S + + + + E +R L+ + ++AGY+P
Sbjct: 310 STTSTTIKPSLPPRRKQSSTNMLEEKDRVREFRCAMPYKEEGEGRLKGLNGQMREAGYVP 369
Query: 172 YTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLS 231
T YVL D+D+EAK++ Y SERLA+AYGLISTP TLRI KNLRICG+CHN IK +S
Sbjct: 370 DTRYVLHDIDEEAKQQALQYHSERLAIAYGLISTPARTTLRIIKNLRICGDCHNAIKIMS 429
Query: 232 SIENREIIVRD 242
I RE+IVRD
Sbjct: 430 KIVGRELIVRD 440
>gi|357498695|ref|XP_003619636.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494651|gb|AES75854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 403
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 112/229 (48%), Gaps = 46/229 (20%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V PN TF+ ++ AC + EG +FE ++ DY INP +EH+ +VDL R + + EA
Sbjct: 158 VSPNKVTFIALLNACSHGYMIKEGKSYFELMSSDYGINPEIEHYGCMVDLLSRSELLKEA 217
Query: 121 REFIRNMQIDASSVVWETL----EKYAQTEPG------------------LLLGEPSSS- 157
E I +M + +W L Y E G +LLG S+
Sbjct: 218 EEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTS 277
Query: 158 --------LRLSN--------------KKKDAGYMPYTEYVLRDLD-QEAKEKPQTYRSE 194
LR N K K AGY+P VL D D +E KE + SE
Sbjct: 278 GRWNEARILRERNEIREIYSFLEEMIRKLKIAGYVPELGEVLLDFDDEEDKETTLSVHSE 337
Query: 195 RLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
+LA+A+GL++T PG + I KNLR+CG+CH IK +S + +R IIVRD+
Sbjct: 338 KLAIAFGLMNTAPGTPICIVKNLRVCGDCHEAIKFISKVYDRVIIVRDR 386
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 145/315 (46%), Gaps = 76/315 (24%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + C+ ++ AL V +++K + S I L + L+ +R ++ G +
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN+ T VGV+ AC G +++G+ +F S+ + Y I+P EH+ ++DL G+ K+ +A +
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVK 416
Query: 123 FI----------------------RNM-------------------------QIDASSVV 135
+ RNM I A+S
Sbjct: 417 LLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQK 476
Query: 136 WETLEKY--------AQTEPG------------LLLGEPSSSLRLSNKKK---------D 166
W+++E+ + EPG ++G+ S + KK
Sbjct: 477 WDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTG 536
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
GY+P T +VL+DL+ E E + SE+LA+A+GL++ P + +RI+KNLRICG+CH F
Sbjct: 537 IGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVF 596
Query: 227 IKKLSSIENREIIVR 241
K S +E R I++R
Sbjct: 597 CKLASKLEIRSIVIR 611
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG----KRFE 57
L SE LC +R++ A++ MD L++ G++ DS EL+ C+ + + G +
Sbjct: 29 LLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLY 88
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPT 100
+G RP +I F +++ Q F+ + + I+ T
Sbjct: 89 FNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWT 131
>gi|224067298|ref|XP_002302454.1| predicted protein [Populus trichocarpa]
gi|222844180|gb|EEE81727.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 96/173 (55%), Gaps = 29/173 (16%)
Query: 91 VTRDYDINPTLEHFLGIVDLYGRLQKIAEAR-------------------EFIRNMQIDA 131
++R Y I EH+ +VDL GR KIAE + E + + A
Sbjct: 1 MSRGYGIILAEEHYEAMVDLLGRSGKIAECKGVCCKYTNRLKHQSLGDSTEALESQNTRA 60
Query: 132 SSVVWETLE-------KYAQ-TEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQE 183
+ ++ T+ Y + T G+ E SL S + +DAGY+P T +V DLDQE
Sbjct: 61 TRLICITIRAKDSFNINYERATSDGIKAYEKLRSL--SKEVRDAGYLPDTRFVFHDLDQE 118
Query: 184 AKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENR 236
AKEK Y ER+A+AYGLI+TPPG +LRI KNLRICG+ HNFIK LS +ENR
Sbjct: 119 AKEKTLFYHIERIAIAYGLINTPPGTSLRIMKNLRICGDSHNFIKILSKMENR 171
>gi|297740128|emb|CBI30310.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 99/182 (54%), Gaps = 13/182 (7%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
P+ + FV V++AC G ++G +F ++ RDY + P EH+ +VDL GR ++ EAR+
Sbjct: 359 PDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARK 418
Query: 123 FIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQ 182
I +M ++ VW L + + L E + R K+ ++
Sbjct: 419 LIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKRKLKKEPES-------------RN 465
Query: 183 EAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
E SE+LA+A+GLI+T PG + + KNLR+CG+CH F+K +S I +R+++VRD
Sbjct: 466 EELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRD 525
Query: 243 KT 244
T
Sbjct: 526 AT 527
>gi|326524400|dbj|BAK00583.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 112/252 (44%), Gaps = 64/252 (25%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
RF+ G +P+ F V ACG G+VDEG HFES+ +D+ I P+++H+ IV++ G+
Sbjct: 194 RFKQTGDKPDPGMFTHVFLACGILGSVDEGMLHFESMQKDFGITPSVDHYASIVNMLGQS 253
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL--RLS----NKKKDAG 168
+ EAREFI M + S +WE+L + L LG+ + + RL N++ G
Sbjct: 254 GYVDEAREFIERMPTEPSVDIWESLMNMCRLNGYLELGDRCAQIIERLDPSRLNEQSKTG 313
Query: 169 YMPYTEYVL-------RDLDQEAKEKPQTYR----------------------------- 192
P L + EA+ K YR
Sbjct: 314 LFPVNASDLAKEKERKKANTAEARSKVHEYRAGDRSHPETLKIYEELRYLAAHMKEAGYI 373
Query: 193 ----------------------SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKL 230
SERLAV+YGLI++ +R+ KNLR CG+CH +K +
Sbjct: 374 ADTRFVLHDVDPETKEDALLAHSERLAVSYGLITSAARSPIRVIKNLRSCGDCHTALKII 433
Query: 231 SSIENREIIVRD 242
S + R+II RD
Sbjct: 434 SKLVGRQIIARD 445
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 125/272 (45%), Gaps = 79/272 (29%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
LKL E+ K G++PN+ T VGV+ AC G V+EG +F S+ + I+P EH+
Sbjct: 248 LKLFESMKVL---GIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGC 304
Query: 107 IVDLY---GRLQK---------------------------------IAEAREFIRNMQID 130
++DL GRL + I A++ +R D
Sbjct: 305 MIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQD 364
Query: 131 ASSVV-----------WETLEKYAQT--------EPG------------LLLGEPSSSL- 158
A + V W + + +T EPG +LG+ S
Sbjct: 365 AGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQI 424
Query: 159 --------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
+L K GY+P T +VL+DL+ E + Y SE+LA+ +GL+S P G+T
Sbjct: 425 REINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMSLPRGQT 484
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI+KNLRICG+CH F K L+ +E R I++RD
Sbjct: 485 IRIRKNLRICGDCHLFTKLLAKMEQRIIVIRD 516
>gi|297736881|emb|CBI26082.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 114/227 (50%), Gaps = 48/227 (21%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
++PN TFVGV+ AC G VD+G ++ S+ + + + P +H+ +VD+ GR ++ EA
Sbjct: 327 IKPNDVTFVGVLHACSHSGLVDDGLEYLHSMHKKHGVVPDTKHYTCVVDMLGRTGRLDEA 386
Query: 121 REFIRNMQI--DASSVVWETL----EKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTE 174
+ +++Q+ D +++W TL Y + + + E S L SN++ A Y+ +
Sbjct: 387 HQLAKSIQVEPDQGALLWGTLLSASRLYGRVDIAV---EASKWLIESNQQVAAAYIRDSA 443
Query: 175 YVLR---------------------------------------DLDQEAKEKPQTYRSER 195
YV D+++EAKE+ SER
Sbjct: 444 YVFYAGDVSLCARGSEVASLLRELERRMKERGYVGGSRGLVSIDVEEEAKEEIVGLHSER 503
Query: 196 LAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
LA+A+GLIS P G T+R+ KNLR+C +CH K +S I R+ +VRD
Sbjct: 504 LALAFGLISIPKGVTIRVMKNLRMCRDCHEAFKLISEIVERDFVVRD 550
>gi|49533766|gb|AAT66765.1| Putative selenium-binding protein, related [Solanum demissum]
Length = 741
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 118/254 (46%), Gaps = 68/254 (26%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
F+ G++P+ F+GV AC G + EG HFES+++DYDI+ ++E ++G+VD+ G
Sbjct: 471 FKETGMKPDGQMFLGVFHACSVVGDIVEGMLHFESMSKDYDIDLSMEQYVGVVDMLGSTG 530
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL-------RLSNKKKDAG 168
+ EA EFI M I+ S VWET+ + L LG+ + + RL + K AG
Sbjct: 531 YLDEAMEFIERMPIEPSIEVWETMMNLCRIHGNLELGDRCAEIVELLDPSRLDEQSK-AG 589
Query: 169 YMPYT-------------------------EY---------------VLRDLDQEAKEK- 187
++ EY +LR L Q KE
Sbjct: 590 FLAVKASDIAKEKEKKRSAQSLLEARSKVHEYRAGDRSHPDHEKIYALLRGLKQLMKEDG 649
Query: 188 --PQT-----------------YRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIK 228
P+T SERLA A GL+++ +RI KNLR+CG+CHN +K
Sbjct: 650 YIPETKFVLHDVDQETKEDALMAHSERLAFAQGLMNSSARSPIRIIKNLRVCGDCHNALK 709
Query: 229 KLSSIENREIIVRD 242
S + REII+RD
Sbjct: 710 IASKLVGREIIMRD 723
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 112/261 (42%), Gaps = 77/261 (29%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
++PN TFVG++ AC G V G + F S+T DY INP+L+H+ ++DL R + EA
Sbjct: 335 IKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEA 394
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLG-------------EPSSSLRLSN----- 162
+ + W +L L +G +PS+ + LSN
Sbjct: 395 ENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGA 454
Query: 163 -----------------KKKDAGY-------------------MPYTEYV---LRDLD-- 181
+K+ GY P + L+DLD
Sbjct: 455 EMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAE 514
Query: 182 ------------------QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
Q+ KEK + SERLAVAYGL+ PG +RI KNLRICG+C
Sbjct: 515 MRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDC 574
Query: 224 HNFIKKLSSIENREIIVRDKT 244
HN +K +S I REI+VRD T
Sbjct: 575 HNVLKFISDIVKREIMVRDAT 595
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 118/251 (47%), Gaps = 69/251 (27%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V PN TF+GV+TAC G VDEG +++E++T+DY ++PT++H +VDL GR ++A+A
Sbjct: 517 VVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADA 576
Query: 121 REFIRNMQIDASSVVWETL----EKYAQTEPGLLLG------EPSSS------------- 157
FI N A V+W +L + E G L+ EP+SS
Sbjct: 577 EAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDA 636
Query: 158 --LRLSNKKKD------------------------------------AGYMPYTEYVLR- 178
L L++K +D A Y E + R
Sbjct: 637 GELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRI 696
Query: 179 ----DLDQEAKEKPQTY---RSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLS 231
D E ++ Q SE+LAVA G+I P +R+ KNLR+C +CH+ +K +S
Sbjct: 697 EKLATTDTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLIS 756
Query: 232 SIENREIIVRD 242
ENREII+RD
Sbjct: 757 KSENREIILRD 767
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 112/261 (42%), Gaps = 77/261 (29%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
++PN TFVG++ AC G V G + F S+T DY INP+L+H+ ++DL R + EA
Sbjct: 335 IKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEA 394
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLG-------------EPSSSLRLSN----- 162
+ + W +L L +G +PS+ + LSN
Sbjct: 395 ENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGA 454
Query: 163 -----------------KKKDAGY-------------------MPYTEYV---LRDLD-- 181
+K+ GY P + L+DLD
Sbjct: 455 EMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAE 514
Query: 182 ------------------QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
Q+ KEK + SERLAVAYGL+ PG +RI KNLRICG+C
Sbjct: 515 MRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDC 574
Query: 224 HNFIKKLSSIENREIIVRDKT 244
HN +K +S I REI+VRD T
Sbjct: 575 HNVLKFISDIVKREIMVRDAT 595
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 124/261 (47%), Gaps = 76/261 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++P+ T+VGV++AC G V++G +F+ + + I+PTL H+ +VDL+GR + E
Sbjct: 471 GIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQE 530
Query: 120 AREFIRNMQIDASSVVWETL----EKYAQTEPG------LLLGEPSSS------------ 157
A +F+ NM ++ + W +L + Y + LLL EP++S
Sbjct: 531 AYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSS 590
Query: 158 ---------------------------LRLSNKKK----DAGYMPYTEYVLRDLDQEAKE 186
+++ NK + G P + + + +D+ KE
Sbjct: 591 CGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKE 650
Query: 187 ---------------------KPQTYR--SERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
K Q R SE+LA+A+G+ISTP TLRI KNLR+C +C
Sbjct: 651 IKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDC 710
Query: 224 HNFIKKLSSIENREIIVRDKT 244
HN IK +S + +REIIVRD T
Sbjct: 711 HNAIKFISKLVDREIIVRDAT 731
>gi|294464140|gb|ADE77588.1| unknown [Picea sitchensis]
Length = 312
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 76/264 (28%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH----------- 103
+ + GV+PN TF+ V++AC G VDEG++ + +T DY I PT+EH
Sbjct: 31 QMQQRGVKPNEITFISVLSACSHAGLVDEGWKCYNCMTLDYAITPTVEHYACMVDLLGRA 90
Query: 104 ------------------------FLGIVDLYGRLQKIAEAREFIRNMQID--------- 130
FLG ++ ++ E + N+ D
Sbjct: 91 GHLNEAWDFIEKMPIEPGASVWGAFLGSCRIHCNIELGERVAELLLNLDPDNAGYYVLLS 150
Query: 131 ---ASSVVWETL--------EKYAQTEPGLLLGEPSSSLR-------------------- 159
A++ W+ + EK + PG L E ++ L
Sbjct: 151 NIYAAAGRWDDVAKVRKMMKEKDVKKSPGCSLIEVNNKLHSFVVGDISHPQTEAIYAMLE 210
Query: 160 -LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
L+ + + GY+P T++VL D+++E KE SE+LA+A+GLIST G ++RI KNLR
Sbjct: 211 TLARQMEAVGYVPCTDFVLHDVEEEIKENMLFAHSEKLAIAFGLISTRSGTSIRITKNLR 270
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH+ K +S I REII+RD
Sbjct: 271 VCGDCHSATKFISKIVKREIIMRD 294
>gi|388507702|gb|AFK41917.1| unknown [Medicago truncatula]
Length = 206
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 98/187 (52%), Gaps = 53/187 (28%)
Query: 87 HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQ-- 144
FES+ ++Y I P +EH+LG+V+++G ++ EA EFI NM I+A +WETL +A+
Sbjct: 2 QFESM-KEYGIVPGMEHYLGVVNIFGCAGRLDEAHEFIENMPIEAGVELWETLRNFARIH 60
Query: 145 --------TEPGLLLGEPSSS----LRLSNKKK--------------------------- 165
+ L + +PS + + L +KK
Sbjct: 61 GDLEREDCADELLTVLDPSKAAADKVPLPQRKKQSAINMLEEKNRVSEYRCNMPYKEEGD 120
Query: 166 -----------DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIK 214
+AGY+P T YVL D+D+E KEK Y SERLA+AYGLISTPP TLRI
Sbjct: 121 VKLRGLTGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRII 180
Query: 215 KNLRICG 221
KNLRICG
Sbjct: 181 KNLRICG 187
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 118/271 (43%), Gaps = 76/271 (28%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
+EA ++ + GV P+ T GV++AC G VD+G F+ +++ + I P + H+ +VD
Sbjct: 357 IEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVD 416
Query: 110 LYGRLQ-----------------------------------------------KIAEARE 122
L GR K EA +
Sbjct: 417 LLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGD 476
Query: 123 FIRNMQIDASSVVWETL--------EKYAQTEPGLLLGEPSSSLR--------------- 159
++ + I +S W+ + EK QT PG E +
Sbjct: 477 YVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEI 536
Query: 160 ------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
+ + K AGY+ L +L E K +Y SE+LA+A+G+++TPPG T+R+
Sbjct: 537 YEMLDEIGKQLKIAGYVAELSSELHNLGAEEKGNRLSYHSEKLAIAFGVLATPPGTTIRV 596
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRDKT 244
KNLRIC +CHNF K LS NRE+++RD+T
Sbjct: 597 AKNLRICVDCHNFAKVLSGAYNREVVIRDRT 627
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 116/264 (43%), Gaps = 75/264 (28%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
+ GVRPN TF+ +TAC G +++G + +T D+ I P +HF IVDL GR
Sbjct: 656 MQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCG 715
Query: 116 KIAEAREFI--------------------------------RNMQID---ASSVV----- 135
++ EA + + R MQ+D ASS +
Sbjct: 716 RLDEAEKLLERTSQADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASM 775
Query: 136 ------WE--------TLEKYAQTEPGLLLGEPSSSL---------------------RL 160
W L+K + +PG E + L RL
Sbjct: 776 YAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERL 835
Query: 161 SNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRIC 220
K AGY+ T VL D+ QE KE+ SE+LA+A+GL+STP G LR+ KNLR+C
Sbjct: 836 HWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVC 895
Query: 221 GECHNFIKKLSSIENREIIVRDKT 244
+CH K +S + R+I++RD +
Sbjct: 896 SDCHTATKLISKVTGRDILMRDSS 919
>gi|147809821|emb|CAN66904.1| hypothetical protein VITISV_025136 [Vitis vinifera]
Length = 558
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 54/283 (19%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR-FENDGVRP--NWSTFVGVI 72
+ AL V + +G D L++ C + K+ F+ G R +W++ +
Sbjct: 260 RHALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAY 319
Query: 73 T----ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQ 128
AC G +EG + FE+++ ++ I P L+H+ +VD+ GR +I+EA+E I M
Sbjct: 320 AMHGQACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMP 379
Query: 129 IDASSVVWETL----------------------EKYAQTEPGLLLGEPSSSLR------- 159
++ SVVW L K + EPGL E + +
Sbjct: 380 MEPDSVVWSALLGSCRKHDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQ 439
Query: 160 --------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIST 205
L + KD GY+P L D++ E KE+ Y SE+LA+A+ L++
Sbjct: 440 QHPEKEAICARLEELVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNV 499
Query: 206 PP----GRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
G T++I KN+RIC +CHNF+K S + + EI+VRD
Sbjct: 500 GSICCSGNTIKIMKNIRICVDCHNFMKLASELVDMEIVVRDSN 542
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 118/259 (45%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G +P+ TF+GV++AC G V +G Q FES+ +++ I P +H+ ++DL+ R ++ E
Sbjct: 471 GFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEE 530
Query: 120 ARE----------------------FIRNMQI---------------DASSVVWETL--- 139
AR+ F RNM+I AS ++ ++
Sbjct: 531 ARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAA 590
Query: 140 ----EKYAQTEPGL----LLGEPSSSL----------------------------RLSNK 163
E+ A G+ L EP S +L+ K
Sbjct: 591 KGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYK 650
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
GY+P VL D+D K K + SE+LA+A+GLI PPG +R+ KNLR+CG+C
Sbjct: 651 MVQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDC 710
Query: 224 HNFIKKLSSIENREIIVRD 242
HN K +S I REI+VRD
Sbjct: 711 HNATKYISKITQREILVRD 729
>gi|297734415|emb|CBI15662.3| unnamed protein product [Vitis vinifera]
Length = 657
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 116/226 (51%), Gaps = 34/226 (15%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
+E +R ++G+ PN TF+ V++AC G D G++ FES++RD+ I P H+ +++
Sbjct: 419 VEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIE 478
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLG----------------- 152
L GR + EA I++ + +W L + LG
Sbjct: 479 LLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSN 538
Query: 153 --------------EPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAV 198
E +++L L K GY+P +++L D+D E +E+ Y SE+LA+
Sbjct: 539 YVVLLNIYNRSGRLEEAAALMLEISKH--GYVPQDKFLLPDVD-EQEERVLLYHSEKLAI 595
Query: 199 AYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
A+GLI+T L+I ++ RICG+CH+ IK ++ + REI+VRD +
Sbjct: 596 AFGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDAS 641
>gi|147846621|emb|CAN83751.1| hypothetical protein VITISV_040023 [Vitis vinifera]
Length = 496
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 99/201 (49%), Gaps = 13/201 (6%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K + GV PN TFV +++AC G VDEG + + ++ Y I P +EH+ ++DL R
Sbjct: 283 KEMKEAGVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLAR 342
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE----------PSSSLRLSNK 163
+ EA E I M ++ + L + LGE P S RL
Sbjct: 343 AGLLEEAMELIGTMPMEPNPCALGALLGGCRIHGNFELGEMVGKRLINLQPCQSGRL--- 399
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
K G T L D+++E KE SE+LA+AYGL+ +RI KNLR+C +C
Sbjct: 400 KSAIGXSADTGNXLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDC 459
Query: 224 HNFIKKLSSIENREIIVRDKT 244
H+ K +S + EIIVRD+
Sbjct: 460 HHVTKLISKVYGGEIIVRDRN 480
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV+P+ +T V +++AC GA+D+G H + D I +VD+Y + KI+
Sbjct: 188 GVKPSEATVVSLLSACAHLGALDKGL-HLHTYINDNRIEVNSIVGTALVDMYAKCGKISL 246
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMP 171
A + M+ + W T+ +LG + +L + K+AG P
Sbjct: 247 ATQVFNAME-SKDVLAWNTI-----IAGMAILGHVKEAQQLFKEMKEAGVEP 292
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 123/271 (45%), Gaps = 76/271 (28%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K LE + + + + TF+GVI+AC G V +G +F + D+ INPT+EH+ +
Sbjct: 588 KALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCM 647
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLG----------EPSSS 157
+DLY R + +A + I M ++ VW + ++ + LG EP S
Sbjct: 648 IDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHS 707
Query: 158 ---LRLSN----------------------KKKDAGY------------------MPYTE 174
+ LSN KK+ GY P ++
Sbjct: 708 AAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSD 767
Query: 175 YV----------LRD-------------LDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
++ LRD ++ E KE ++ SERLA+A+GLI+T P L
Sbjct: 768 HIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPL 827
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+I KNLR+CG+CH+FIK +S +E R I+VRD
Sbjct: 828 QIVKNLRVCGDCHSFIKLVSLVEKRYIVVRD 858
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 122/269 (45%), Gaps = 76/269 (28%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF----- 104
LE K E +G+ P+ TFVGV+ AC G V+EGF++F+ + YDI P +EH+
Sbjct: 194 LEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYGCMVD 253
Query: 105 ------------------------------LGIVDLYGRLQKIAEAR------------E 122
LG ++G L A AR +
Sbjct: 254 LLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGLGAFARARLLQLEPKDSGD 313
Query: 123 FIRNMQIDASSVVWETLEKYAQT--------EPGLLLGE---------------PSSS-- 157
++ + AS W + + +T PG L E P S
Sbjct: 314 YVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELGNHVHEFVMGDRTHPQSEAI 373
Query: 158 ----LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
+ ++ K K AGY+P+T VL D+++E KE Y SE++A+A+ LI+T PG +RI
Sbjct: 374 YKMLVEMAMKLKLAGYVPHTANVLADIEEEEKESALFYHSEKIAIAFMLINTLPGTPIRI 433
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRD 242
KNLR+C +CH IK +S + R+I+VRD
Sbjct: 434 IKNLRVCADCHFAIKLISKVFERDIVVRD 462
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
KR ++GV P+ T V +++AC + G + + + +N L ++DLY +
Sbjct: 96 KRMGSEGVEPDGFTMVSLLSACAELATLVLGRRAHVYMVK-VGLNKNLHANNALLDLYAK 154
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
I+EAR+ M I+ + V W +L
Sbjct: 155 CGTISEARKIFDEMGIERNVVSWTSL 180
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 117/251 (46%), Gaps = 69/251 (27%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V PN TF+GV+TAC G VDEG +++E++ +DY ++PT++H +VDL GR ++A+A
Sbjct: 517 VVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADA 576
Query: 121 REFIRNMQIDASSVVWETL----EKYAQTEPGLLLG------EPSSS------------- 157
FI N A V+W +L + E G L+ EP+SS
Sbjct: 577 EAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDA 636
Query: 158 --LRLSNKKKD------------------------------------AGYMPYTEYVLR- 178
L L++K +D A Y E + R
Sbjct: 637 GELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRI 696
Query: 179 ----DLDQEAKEKPQTY---RSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLS 231
D E ++ Q SE+LAVA G+I P +R+ KNLR+C +CH+ +K +S
Sbjct: 697 EKLATTDTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLIS 756
Query: 232 SIENREIIVRD 242
ENREII+RD
Sbjct: 757 KSENREIILRD 767
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 115/259 (44%), Gaps = 66/259 (25%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+++E G N +RPN T++ + + G VDEG F ++ + I PT +H+ +
Sbjct: 600 RMVEEGD--NNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACL 657
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSV-VWETL--------------------------- 139
VDL GR +I EA I+ M + V W +L
Sbjct: 658 VDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPNV 717
Query: 140 ---------------EKYAQTEPG------------LLLGEPSSSLR---------LSNK 163
EK + EPG L G+ S LS +
Sbjct: 718 LDYGTKQSMLGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLR 777
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
K GY+P T VL ++ +E KE SERLA+A+GL++T PG T+R+ KNLR+C +C
Sbjct: 778 MKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGLLNTSPGTTIRVAKNLRVCNDC 837
Query: 224 HNFIKKLSSIENREIIVRD 242
H K +S I +REII+RD
Sbjct: 838 HVATKFISKIVDREIILRD 856
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 133/309 (43%), Gaps = 78/309 (25%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
+V AA ++ ++++ + + I+ + K L + GV+PN TFVG+I
Sbjct: 288 DVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIY 347
Query: 74 ACGCFGAVDEGFQHFESVTRDYDIN----------------------------------- 98
AC G V++G + F+S+T+DY I
Sbjct: 348 ACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDE 407
Query: 99 PTLEHFLGIVDLYGRLQ-------------KIAEAREFIRNMQIDASSVVW----ETLEK 141
PT L GR Q K+ + +I I AS+ +W E K
Sbjct: 408 PTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRK 467
Query: 142 YAQTE----PG------------LLLGEPSSSL-----RLSNKKKDA-----GYMPYTEY 175
+ E PG GE S L RL K ++ GY+P T +
Sbjct: 468 LGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSW 527
Query: 176 VLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIEN 235
+L D+D++ KEK + SER AVAYGL+ PG +RI KNLR+CG+CH +K +S I
Sbjct: 528 ILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITE 587
Query: 236 REIIVRDKT 244
REIIVRD T
Sbjct: 588 REIIVRDAT 596
>gi|5280987|emb|CAB46001.1| hypothetical protein [Arabidopsis thaliana]
gi|7268109|emb|CAB78447.1| hypothetical protein [Arabidopsis thaliana]
Length = 686
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 116/265 (43%), Gaps = 78/265 (29%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDIN------------------- 98
+ GV+PN TFVG+I AC G V++G + F+S+T+DY I
Sbjct: 386 SHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLL 445
Query: 99 ----------------PTLEHFLGIVDLYGRLQ-------------KIAEAREFIRNMQI 129
PT L GR Q K+ + +I I
Sbjct: 446 DEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNI 505
Query: 130 DASSVVW----ETLEKYAQTE----PG------------LLLGEPSSSL-----RLSNKK 164
AS+ +W E K + E PG GE S L RL K
Sbjct: 506 YASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKL 565
Query: 165 KDA-----GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ GY+P T ++L D+D++ KEK + SER AVAYGL+ PG +RI KNLR+
Sbjct: 566 EEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRV 625
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CH +K +S I REIIVRD T
Sbjct: 626 CGDCHVVLKHISEITEREIIVRDAT 650
>gi|297739162|emb|CBI28813.3| unnamed protein product [Vitis vinifera]
Length = 500
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 104/230 (45%), Gaps = 49/230 (21%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
V+ ALEV K+K + S I L L + E GV+PN TF+G++
Sbjct: 303 SVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILN 362
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
AC VDEG+ +P LE
Sbjct: 363 ACSHSKLVDEGWDTIHEFVAGDSSHPQLEMI----------------------------- 393
Query: 134 VVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
YA+ LGE +S + K AGY P T VL D+D+E KE + S
Sbjct: 394 --------YAK------LGE------MSQELKAAGYKPDTGQVLLDMDEEEKETALCHHS 433
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
E+LA+A+GLI T PG T+RI KNLR+C +CH+ K +S I NREIIVRD+
Sbjct: 434 EKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDR 483
>gi|357141490|ref|XP_003572243.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Brachypodium distachyon]
Length = 884
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 115/272 (42%), Gaps = 77/272 (28%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF----- 104
+ A + GV P+ TF GV++AC G VDEGF+ F+ + +Y + P + H+
Sbjct: 597 ISAFEEMSRSGVVPDGQTFTGVLSACSHSGLVDEGFRFFDMMRYEYKMMPNVRHYGCIVD 656
Query: 105 -------------------------------LGIVDLYGRLQ------------KIAEAR 121
LG ++G + K +A
Sbjct: 657 LMGRAGLLDEAYELVVKEMKVAPDATIWRTLLGACRIHGHVDLGEKVISHLIELKAQQAG 716
Query: 122 EFIRNMQIDASSVVWETL--------EKYAQTEPGLLLGEPSSSLR-------------- 159
+++ + A++ WE + E QT PG E + L
Sbjct: 717 DYVLLLNTYAAAGDWEKVAEVRKLMRENEIQTTPGCTTVELNGELHEFIADDASHPRKAE 776
Query: 160 -------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
++ + AGY+P+ L DLD E KE TY SE+LA+A+ L+ P R +R
Sbjct: 777 IYGKLDEINRHLRIAGYVPHVSSDLHDLDSEGKECALTYHSEKLAIAFALLVMPQRRPIR 836
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
+ KNLR+C +CHNF K S + NR +IVRD+T
Sbjct: 837 LAKNLRVCVDCHNFTKVFSGVYNRLVIVRDRT 868
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 130/278 (46%), Gaps = 89/278 (32%)
Query: 51 EAGKRFEN---DG-VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
EA K F N DG P+ TFVGV++AC G ++EGF+HFES++ Y + P +EHF
Sbjct: 423 EALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSC 482
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL-------------------EKYAQTEP 147
+ DL GR ++ + +FI M + + ++W T+ E Q EP
Sbjct: 483 MADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEP 542
Query: 148 G-----LLLGEPSSS-------------LRLSNKKKDAGY------------------MP 171
+LLG ++ ++ ++ KK+AGY P
Sbjct: 543 ENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHP 602
Query: 172 YTEYVLR-----------------------DLDQEAKEKPQTYRSERLAVAYGLI----S 204
T+ + + DL+QE KE+ +Y SE+LAVA+ L S
Sbjct: 603 DTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSS 662
Query: 205 TPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
T P +RI KNLR+CG+CH+ K +S IE R+II+RD
Sbjct: 663 TLP---IRIMKNLRVCGDCHSAFKYISKIEGRQIILRD 697
>gi|7488184|pir||E71401 probable selenium-binding protein - Arabidopsis thaliana
Length = 1070
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 137/320 (42%), Gaps = 78/320 (24%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + + +V AA ++ ++++ + + I+ + K L + GV+
Sbjct: 200 NALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVK 259
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDI------------------------- 97
PN TFVG+I AC G V++G + F+S+T+DY I
Sbjct: 260 PNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAEN 319
Query: 98 ----------NPTLEHFLGIVDLYGRLQ-------------KIAEAREFIRNMQIDASSV 134
PT L GR Q K+ + +I I AS+
Sbjct: 320 LIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASAS 379
Query: 135 VW----ETLEKYAQTE----PG------------LLLGEPSSSL-----RLSNKKKDA-- 167
+W E K + E PG GE S L RL K ++
Sbjct: 380 LWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMR 439
Query: 168 ---GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
GY+P T ++L D+D++ KEK + SER AVAYGL+ PG +RI KNLR+CG+CH
Sbjct: 440 IRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCH 499
Query: 225 NFIKKLSSIENREIIVRDKT 244
+K +S I REIIVRD T
Sbjct: 500 VVLKHISEITEREIIVRDAT 519
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 76/269 (28%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L++ + + VRPN T VGV++AC G VD+G ++FES+ +Y + P EH++ +VD
Sbjct: 761 LDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVD 820
Query: 110 LYGRLQKIAEAREFI----------------------RNMQI--------------DASS 133
+ R ++ A++FI +NM+I D+++
Sbjct: 821 MLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSAT 880
Query: 134 VV-----------WETL--------EKYAQTEPGLLLGEPSSSLR--------------- 159
V W+ EK + EPG E +S+
Sbjct: 881 YVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEI 940
Query: 160 ------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
L+ + + GY+ +L +L QE K+ SE+LA+++GL+S P + +
Sbjct: 941 HEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINV 1000
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRD 242
KNLR+C +CH++IK +S + NREIIVRD
Sbjct: 1001 MKNLRVCNDCHDWIKFVSKVSNREIIVRD 1029
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 114/267 (42%), Gaps = 76/267 (28%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
++ E +G+ N TF+ ++ AC G ++G F+ + Y + P LEH+ +VDL GR
Sbjct: 280 EQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGR 339
Query: 114 LQKIAEAREFIRNM---------------------------------------------- 127
+ EA IR+M
Sbjct: 340 SGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLL 399
Query: 128 -QIDASSVVWETLEKYAQT--------EPGLL------------LGEPSSSL-------- 158
I AS+ W+ + K T EPG+ +G+ S +
Sbjct: 400 SNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLYL 459
Query: 159 -RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
L + K GY+P T V D D E KE SE+LA+A+GL++ PPG +R+ KNL
Sbjct: 460 KELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNIPPGSPIRVMKNL 519
Query: 218 RICGECHNFIKKLSSIENREIIVRDKT 244
RIC +CH IK +S I NREIIVRD +
Sbjct: 520 RICSDCHVAIKLISDINNREIIVRDTS 546
>gi|296084769|emb|CBI25911.3| unnamed protein product [Vitis vinifera]
Length = 288
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF--------------- 104
G +P+ TFVGV++AC G VD+G ++F+S+ + + T +H+
Sbjct: 12 GTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQE 71
Query: 105 --------------------LGIVDLYGRLQKIAEAREFIRNMQ------------IDAS 132
LG ++G L+ A E + ++ I A+
Sbjct: 72 AEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYAT 131
Query: 133 SVVWETLEKYAQT--------EPGL------------LLGEPSSSL---------RLSNK 163
+ +W + + + +PGL L+G+ S + +LS +
Sbjct: 132 AGLWGGVAEVRKVMDARGVVKKPGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKR 191
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
K+ GY+P T +VL D+++E KE+ +Y SE+LAVA+G+ISTP G +++ KNLR C +C
Sbjct: 192 MKEEGYVPDTNFVLHDVEEEQKEQNLSYHSEKLAVAFGIISTPAGTLIKVFKNLRTCVDC 251
Query: 224 HNFIKKLSSIENREIIVRD 242
H IK +S I R+IIVRD
Sbjct: 252 HTAIKFISKIAKRKIIVRD 270
>gi|359497573|ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 287
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF--------------- 104
G +P+ TFVGV++AC G VD+G ++F+S+ + + T +H+
Sbjct: 11 GTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQE 70
Query: 105 --------------------LGIVDLYGRLQKIAEAREFIRNMQ------------IDAS 132
LG ++G L+ A E + ++ I A+
Sbjct: 71 AEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYAT 130
Query: 133 SVVWETLEKYAQT--------EPGL------------LLGEPSSSL---------RLSNK 163
+ +W + + + +PGL L+G+ S + +LS +
Sbjct: 131 AGLWGGVAEVRKVMDARGVVKKPGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKR 190
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
K+ GY+P T +VL D+++E KE+ +Y SE+LAVA+G+ISTP G +++ KNLR C +C
Sbjct: 191 MKEEGYVPDTNFVLHDVEEEQKEQNLSYHSEKLAVAFGIISTPAGTLIKVFKNLRTCVDC 250
Query: 224 HNFIKKLSSIENREIIVRD 242
H IK +S I R+IIVRD
Sbjct: 251 HTAIKFISKIAKRKIIVRD 269
>gi|147843478|emb|CAN82063.1| hypothetical protein VITISV_016431 [Vitis vinifera]
Length = 755
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGA--VDEGFQHFESVTRDYDINPTLEHFLGI 107
L + E G++P+ TFV +I+A + VD + F S+ Y I+PT+ H+ +
Sbjct: 527 LSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVXHYTSL 586
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL---------------EKYAQTEPGLLLG 152
V + G + EA E I M I+ + VW L YA+ +
Sbjct: 587 VGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRSWIIHENKVHSFYARDKSHPQAK 646
Query: 153 EPSSSLRLSNKK-KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
+ S L L + AGY+P T +VL ++++ K+ Y S ++A YGL+ T PGR +
Sbjct: 647 DIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRXI 706
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
RI KN+ +CG+CH F+K +S + REI +RD +
Sbjct: 707 RIVKNILLCGDCHTFLKYVSIVTGREIFLRDAS 739
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 73/113 (64%), Gaps = 14/113 (12%)
Query: 130 DASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQ 189
D S WE L YA+ E L+ K GY+P T++VL D+++EAKE
Sbjct: 1175 DRSHPQWEKL--YAKLE------------ELAAPMKHLGYVPLTDFVLHDIEEEAKEAAL 1220
Query: 190 TYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+Y SERLA+A+GLI+T PG TLRI KNLRICG+CHN IK +S I NR I+VRD
Sbjct: 1221 SYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRD 1273
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
+N VRPN TF+ +++AC G V+EG + F+ + DY + P EHF +VDL GR+ +
Sbjct: 502 KNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQ 561
Query: 117 IAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
+ +A + I M I A VW L + + +GE ++ AGY
Sbjct: 562 LGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGY 614
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GVRP+ TF V++AC G ++EG +F+ +T ++ I L ++ +VDL GR +++E
Sbjct: 1015 GVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSE 1074
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
A + I NM ++ + +W +L + L L E + AGY
Sbjct: 1075 AVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGY 1124
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 73/113 (64%), Gaps = 14/113 (12%)
Query: 130 DASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQ 189
D S WE L YA+ E L+ K GY+P T++VL D+++EAKE
Sbjct: 840 DRSHPQWEKL--YAKLE------------ELAAPMKHLGYVPLTDFVLHDIEEEAKEAAL 885
Query: 190 TYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+Y SERLA+A+GLI+T PG TLRI KNLRICG+CHN IK +S I NR I+VRD
Sbjct: 886 SYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRD 938
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GVRP+ TF V++AC G ++EG +F+ +T ++ I L ++ +VDL GR +++E
Sbjct: 680 GVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSE 739
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
A + I NM ++ + +W +L + L L E + AGY
Sbjct: 740 AVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGY 789
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 114/259 (44%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G PN+ TFV +++AC GAV+ G + F+S+ Y I P EH+ IVD+ GR +
Sbjct: 408 GPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVER 467
Query: 120 AREFIRNMQIDASSVVWETLEK----YAQTEPGLLLGE------PSSS---LRLSNK--- 163
A EFI+ M I + VW L+ + + + GLL E P S + LSN
Sbjct: 468 AYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAA 527
Query: 164 -------------------KKDAGY------------------------MPYTEYVLRDL 180
KK AGY + T LR+
Sbjct: 528 AGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNE 587
Query: 181 DQEAKEKPQ-----------------TYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
+ A KP ++ SE+LA+A+GL+S P +RI KNLRICG+C
Sbjct: 588 MEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDC 647
Query: 224 HNFIKKLSSIENREIIVRD 242
H+F K +S REIIVRD
Sbjct: 648 HSFFKFVSGSVKREIIVRD 666
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 77/269 (28%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI-- 107
LE ++ + + ++PN TF+ V++AC G V+EGFQ+F S+ +DY + P ++H+ +
Sbjct: 564 LELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVD 623
Query: 108 -----------------------VDLYG------RLQKIAEAREFIRNMQID-------- 130
+ ++G R+ K E E N D
Sbjct: 624 LLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGY 683
Query: 131 --------ASSVVWE-------TLEKYA-QTEPGLLLGEPSSSLR--------------- 159
A++ +W+ T+EK Q PG + E + +
Sbjct: 684 HVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKI 743
Query: 160 ------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
L N+ K AGYMP T V D++ KE+ SE+LA+A+ L++T PG T+ +
Sbjct: 744 YAFLETLGNRIKAAGYMPDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHL 802
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRD 242
+KNLR+CG+CHN K +S + REIIVRD
Sbjct: 803 RKNLRVCGDCHNATKYISLVTKREIIVRD 831
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 114/259 (44%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G PN+ TFV +++AC GAV+ G + F+S+ Y I P EH+ IVD+ GR +
Sbjct: 358 GPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVER 417
Query: 120 AREFIRNMQIDASSVVWETLEK----YAQTEPGLLLGE------PSSS---LRLSNK--- 163
A EFI+ M I + VW L+ + + + GLL E P S + LSN
Sbjct: 418 AYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAA 477
Query: 164 -------------------KKDAGY------------------------MPYTEYVLRDL 180
KK AGY + T LR+
Sbjct: 478 AGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNE 537
Query: 181 DQEAKEKPQ-----------------TYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
+ A KP ++ SE+LA+A+GL+S P +RI KNLRICG+C
Sbjct: 538 MEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDC 597
Query: 224 HNFIKKLSSIENREIIVRD 242
H+F K +S REIIVRD
Sbjct: 598 HSFFKFVSGSVKREIIVRD 616
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 134/316 (42%), Gaps = 76/316 (24%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + R ++AA +V +++ + + + I + LE + GV
Sbjct: 390 NALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVS 449
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH------------------- 103
PN T++ V++AC G + EG +HF+S+ ++ I P +EH
Sbjct: 450 PNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAME 509
Query: 104 ----------------FLGIVDLYGRLQKIAEAREFIRNM------------QIDASSVV 135
FLG ++G + A E I + AS+
Sbjct: 510 LVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQ 569
Query: 136 WETL--------EKYAQTEPG------------LLLGEPSSSL---------RLSNKKKD 166
WE + E+ E G +G+ S +L+ K K+
Sbjct: 570 WEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKE 629
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
GY+P T++VL D+++E KE+ SE++AVAYG IST R +R+ KNLR+CG+CH
Sbjct: 630 LGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTA 689
Query: 227 IKKLSSIENREIIVRD 242
K S + +EI++RD
Sbjct: 690 FKYFSIVRRKEIVLRD 705
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 111/261 (42%), Gaps = 77/261 (29%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF---------------- 104
V P+ TF GV++AC G VDEGF+ F+ + +Y + P + H+
Sbjct: 319 VAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEA 378
Query: 105 --------------------LGIVDLYGRLQ------------KIAEAREFIRNMQIDAS 132
LG ++G + K +A +++ + A+
Sbjct: 379 YELVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVISNLIELKAQQAGDYVLLLNTYAA 438
Query: 133 SVVWETL--------EKYAQTEPGLLLGEPSSSL---------------------RLSNK 163
W + EK QT PG E + + ++ +
Sbjct: 439 VGEWSKVSEVRKLMQEKGIQTTPGCTTVEHNGEVYEFIADDDAHPRKVEIYEKLNEINKQ 498
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
+ AGY+P L DLD E KE TY SE+LA+A+ L+ TP R +R+ KNLR+C +C
Sbjct: 499 LRIAGYVPNVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQNRPIRLAKNLRVCVDC 558
Query: 224 HNFIKKLSSIENREIIVRDKT 244
HNF K S I NR +IVRD+T
Sbjct: 559 HNFTKVFSGIYNRLVIVRDRT 579
>gi|413932955|gb|AFW67506.1| pentatricopeptide repeat (PPR) superfamily protein [Zea mays]
Length = 304
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 117/248 (47%), Gaps = 51/248 (20%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIF--LDSPDIIELLNVCMDLKLLEAGKRFENDG 60
+ EL L RE +AA+ ++D++ G L+ + LL C D + L + +R
Sbjct: 82 SDELGRLYREHNPEAAVSLLDEMLQRGSAEQLEPEEQAALLQACADTRSLPSLRRAH--- 138
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLY------GRL 114
R ST I A P L I LY G
Sbjct: 139 -RLLTSTSGSAIPA------------------------PVLHR---IATLYLKLGARGDA 170
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTE 174
+++ E R R + D ++V + E Y + L + + AGY+P T
Sbjct: 171 RRVLEERTRRRPAREDDAAVQAKRREAYTKVR------------ELHAQIRAAGYVPDTR 218
Query: 175 YVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIE 234
YVL D+D++AK + Y SERLA+A+GL+STPPG LR+ KNLRICG+CHN +K ++ +
Sbjct: 219 YVLHDIDEDAKARALMYHSERLAIAFGLVSTPPGTPLRVMKNLRICGDCHNAVKLIAKVT 278
Query: 235 NREIIVRD 242
REI+VRD
Sbjct: 279 GREIVVRD 286
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 120/273 (43%), Gaps = 79/273 (28%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA F N + P+ T++GV+ AC G V++G F S+T + I P + H+ +
Sbjct: 424 EALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCM 483
Query: 108 VDLYGRLQKIAEAREFI----------------------RNMQ----------------- 128
VDL GR ++ EA E I +N+Q
Sbjct: 484 VDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENG 543
Query: 129 --------IDASSVVWETL--------EKYAQTEPGLLLGEPSSSL-------------- 158
I A+ WE L E+ + PG L E + ++
Sbjct: 544 AVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSK 603
Query: 159 ----RLSNKKKD---AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
+L N +D AGY P T V DL +E KE SE+LA+AY LIS+ PG T+
Sbjct: 604 EIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITI 663
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
RI KNLR+C +CH+ K +S NRE+IVRDKT
Sbjct: 664 RIVKNLRMCVDCHHMAKLVSEAYNRELIVRDKT 696
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 76/264 (28%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ + GV+ N +TF+G++ +C G V++G Q+F ++T Y I+P +EH+ +VDL+ R
Sbjct: 234 QMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRA 293
Query: 115 QKIAEAREFIRNMQIDASSVVW-----------------ETLEKYAQTEPG-----LLLG 152
+ EA + I +M + A++VVW L++ + EP ++L
Sbjct: 294 GLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLS 353
Query: 153 ---------EPSSSLRLSNKKKDAGYMPYTEYVLRD------------------------ 179
E ++ LRL K K +P + +V D
Sbjct: 354 NIYSNSGRWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKIYAKLD 413
Query: 180 -------------------LDQEAKEKPQT--YRSERLAVAYGLISTPPGRTLRIKKNLR 218
D E +EK T + SE++A+A+ LI+T PG T+R+ KNLR
Sbjct: 414 ELGMEMKAMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIAFSLITTEPGETIRVTKNLR 473
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH+ IK +S I REI+VRD
Sbjct: 474 VCTDCHSAIKLISRITCREIVVRD 497
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 22/136 (16%)
Query: 14 EVKAALEVMDKLKN---------IGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPN 64
E++ A V D++KN +G + + E L++ +++ +G +P+
Sbjct: 92 EMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQM---------EGAKPD 142
Query: 65 WSTFVGVITACGCFGAVDEGFQHFESVTRDYDI-NPTLEHFLGIVDLYGRLQKIAEAREF 123
T VG ++AC GA+D G Q V D + NP L ++D+Y + +EA
Sbjct: 143 CYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLG--TALIDMYAKCGSTSEAWMV 200
Query: 124 IRNMQIDASSVVWETL 139
+ M ++ +VW +
Sbjct: 201 FQQM-LERDIIVWNAM 215
>gi|226505522|ref|NP_001145034.1| uncharacterized protein LOC100278213 [Zea mays]
gi|195650169|gb|ACG44552.1| hypothetical protein [Zea mays]
Length = 306
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 115/248 (46%), Gaps = 51/248 (20%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIF--LDSPDIIELLNVCMDLKLLEAGKRFENDG 60
+ EL L RE +AA+ ++D++ G L+ + LL VC D
Sbjct: 84 SDELGRLYREHNPEAAVSLLDEMLQRGSAEQLEPEEQAALLQVCAD-------------- 129
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLY------GRL 114
WS ++ + S + P L I LY G
Sbjct: 130 ---TWS-----------LPSLRRAHRLLTSTSGSAIPAPVLHR---IATLYLKLGARGDA 172
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTE 174
+++ E R R + D ++V + E Y + L + + AGY+P T
Sbjct: 173 RRVLEERTRRRPAREDDAAVQAKRREAYTKVR------------ELHAQIRAAGYVPDTR 220
Query: 175 YVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIE 234
YVL D+D++AK + Y SERLA+A+GL+STPPG LR+ KNLRICG+CHN +K ++ +
Sbjct: 221 YVLHDIDEDAKARALMYHSERLAIAFGLVSTPPGTPLRVMKNLRICGDCHNAVKLIAKVA 280
Query: 235 NREIIVRD 242
REI+VRD
Sbjct: 281 GREIVVRD 288
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 121/264 (45%), Gaps = 77/264 (29%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
R + +G RP+ +FV V++AC G DEG++ F S+ + Y I P+ +H+ VD+ GR
Sbjct: 623 RMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRA 682
Query: 115 QKIAEAREFIRNMQIDASSVVWETL----EKYAQTEPGLLL---------GEPSSSLRLS 161
+A+A E IR M + + +VW+TL KY + G L G+ S+ + LS
Sbjct: 683 GWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLS 742
Query: 162 N----------------------KKKDAG------------------YMPYTEYVLRDL- 180
N +K+AG P +E + R+L
Sbjct: 743 NILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELE 802
Query: 181 ----------------------DQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
D+ KE+ SERLA+A G++S+ T+R+ KNLR
Sbjct: 803 RLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSSTD-TVRVMKNLR 861
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CHN K +S I N+EI+VRD
Sbjct: 862 VCEDCHNATKFISKIVNKEIVVRD 885
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 113/260 (43%), Gaps = 76/260 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL----- 114
G +P TF+G+++ACG G V+EG F + Y I P +EH+ +V+L GR
Sbjct: 369 GHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEE 428
Query: 115 ------------------------------------------QKIAEAREFIRNMQIDAS 132
QK+A + ++ + A+
Sbjct: 429 AYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAA 488
Query: 133 SVVWETLEKY--AQTEPGLLLGEPSSSLRLSNKK-------------------------- 164
+ WE + K E G+ SS+ + NK
Sbjct: 489 TGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSW 548
Query: 165 -KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
K GY P T+ VL DL +E KE+ SE+LA+A+GLIST PG T++I KNLR+C +C
Sbjct: 549 LKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDC 608
Query: 224 HNFIKKLSSIENREIIVRDK 243
H +K +S I R+I++RD+
Sbjct: 609 HTVMKMISEITGRKIVMRDR 628
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 76/270 (28%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
+EA + GV P+ TF GV++AC G VDEG F ++R++ + P + H+ +VD
Sbjct: 293 IEAFEEMLRIGVLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVD 352
Query: 110 LYGRLQ-----------------------------------------------KIAEARE 122
L GR K EA +
Sbjct: 353 LLGRAGLLDKAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGD 412
Query: 123 FIRNMQIDASSVVWETL--------EKYAQTEPGLLLGEPSSSLR--------------- 159
++ + I +S+ WE + K QT PG E ++
Sbjct: 413 YVLLLNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREI 472
Query: 160 ------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
++++ + AGY+ L +D + K ++ SE+LAVA+G+++TPPG LR+
Sbjct: 473 YETLDEINHQLRIAGYVVELSSELHKMDDKEKGYVLSHHSEKLAVAFGVLATPPGTILRV 532
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRDK 243
NLR+C +CHNF+K S + NR++++RD
Sbjct: 533 ASNLRVCVDCHNFLKLFSGVYNRDVVLRDH 562
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 118/264 (44%), Gaps = 77/264 (29%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
R + +G RP+ +FV V++AC G DEG++ F S+ + Y I P+ +H+ VD+ GR
Sbjct: 623 RMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRA 682
Query: 115 QKIAEAREFIRNMQIDASSVVWETL----EKYAQTEPGLLL---------GEPSSSLRLS 161
+A+A E IR M + + +VW+TL KY + G L G+ S+ + LS
Sbjct: 683 GWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLS 742
Query: 162 NKKKDAGYM----------------------------------------PYTEYVLRDL- 180
N AG P +E + R+L
Sbjct: 743 NILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELE 802
Query: 181 ----------------------DQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
D+ KE+ SERLA+A G++S+ T+R+ KNLR
Sbjct: 803 RLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSSTD-TVRVMKNLR 861
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CHN K +S I N+EI+VRD
Sbjct: 862 VCEDCHNATKFISKIVNKEIVVRD 885
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 115/240 (47%), Gaps = 50/240 (20%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+R ++ GVRPN TF+ V+TAC G V E Q+ S++RDY + PT++H+ ++D Y R
Sbjct: 480 RRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSR 539
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSS--LRLSNKKKDAGYM- 170
+ EA E I M + ++ W++L L LG+ ++ RL + AGY+
Sbjct: 540 AGLLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRL-DPGDTAGYIL 598
Query: 171 ---PYTEY-------------VLRDLDQEA-----KEKPQTYR----------------- 192
Y+ + R+L +E K Q +R
Sbjct: 599 LFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRPVRLLNEEDDVSCSLPA 658
Query: 193 --------SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
SE+LA+A+GLIST + + KNLR C +CH F K++S + R+I+VRD T
Sbjct: 659 RKEQLLDHSEKLAIAFGLISTEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDST 718
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 134/290 (46%), Gaps = 55/290 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEN---- 58
NS + + + K ALEV ++N G+ LD I +L C L+E G+++ N
Sbjct: 576 NSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIK 635
Query: 59 ----DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTL-EHFLGIVDLYGR 113
D ++S V + + G F D+ + + +PT+ L ++
Sbjct: 636 DYHIDKKXEHYSCMVDLYSRAGMF---DKAMDIINGMP--FPASPTIWRTLLAACRVHRN 690
Query: 114 LQKIAEAREFIRNMQ------------IDASSVVWETL--------EKYAQTEPG----- 148
L+ A E + ++Q I A + WE E+ + E G
Sbjct: 691 LELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIE 750
Query: 149 -------LLLGE---PSSSL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYR 192
L G+ P S L LS K KD GY P T YV D+++E KE +
Sbjct: 751 IKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQH 810
Query: 193 SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
SERLA+AYGLI+ PPG ++I+KNLRICG+CHN I+ +S IE R +IVRD
Sbjct: 811 SERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRD 860
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 135/290 (46%), Gaps = 55/290 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
NS + + + K ALEV ++N G+ LD I +L C L+E G+++ N ++
Sbjct: 576 NSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIK 635
Query: 63 --------PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTL-EHFLGIVDLYGR 113
++S V + + G F D+ + + +PT+ L ++
Sbjct: 636 DYHIDKKIEHYSCMVDLYSRAGMF---DKAMDIINGMP--FPASPTIWRTLLAACRVHRN 690
Query: 114 LQKIAEAREFIRNMQ------------IDASSVVWETL--------EKYAQTEPG----- 148
L+ A E + ++Q I A + WE E+ + E G
Sbjct: 691 LELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIE 750
Query: 149 -------LLLGE---PSSSL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYR 192
L G+ P S L LS K KD GY P T YV D+++E KE +
Sbjct: 751 IKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQH 810
Query: 193 SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
SERLA+AYGLI+ PPG ++I+KNLRICG+CHN I+ +S IE R +IVRD
Sbjct: 811 SERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRD 860
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 76/269 (28%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L++ + + VRPN T VGV++AC G VD+G +FES+ +Y ++P EH++ +VD
Sbjct: 778 LDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVD 837
Query: 110 LYGRLQKIAEAREFI----------------------RNMQI--------------DASS 133
+ R ++ A+EFI +NM+I D+++
Sbjct: 838 MLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSAT 897
Query: 134 VV-----------WETL--------EKYAQTEPGLLLGEPSSSLR--------------- 159
V W+ EK + EPG E +S+
Sbjct: 898 YVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEI 957
Query: 160 ------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
L+ + + GY+ +L +L E K+ SE+LA+++GL+S P + +
Sbjct: 958 HEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINV 1017
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRD 242
KNLR+C +CH +IK +S + NREIIVRD
Sbjct: 1018 MKNLRVCNDCHAWIKFVSKVSNREIIVRD 1046
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 47/273 (17%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
K A+++ + + I + + LL C L+E G RF E VRP+ +
Sbjct: 284 KDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTC 343
Query: 71 VITACGCFGAVDEGFQHFESVTRDYD-----------------------INPTLE----- 102
++ G G +DE + E++T + D N LE
Sbjct: 344 MVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQN 403
Query: 103 --HFLGIVDLY---GRLQKIAEAREFIRNMQIDA-SSVVW-ETLEKYAQTEPGLLLGEPS 155
H++ + ++Y G+ +K+A+ R+ + ++ W E K Q G P
Sbjct: 404 PGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDR-SHPQ 462
Query: 156 SS------LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
S + L K + AGY+P T++VL+D+++E K++ SE+LA+A+GLI+ P G
Sbjct: 463 SKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGE 522
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KNLR+CG+CH F K +SSI R IIVRD
Sbjct: 523 PIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRD 555
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 24/167 (14%)
Query: 15 VKAALEVMDKLKNIGIFLDSP------------DIIELLNVCMDLKLLEAGKRFENDGVR 62
V++A EV D++K + S D I+L ++ + +L
Sbjct: 252 VESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAIL------------ 299
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN TFV ++ AC G ++EG + F S+ ++ + P ++H+ +VDL GR ++ EA
Sbjct: 300 PNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALR 359
Query: 123 FIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
I M ++ +W L + + L E +++ L + ++ G+
Sbjct: 360 LIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGH 406
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 76/269 (28%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L++ + + VRPN T VGV++AC G VD+G +FES+ +Y ++P EH++ +VD
Sbjct: 738 LDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVD 797
Query: 110 LYGRLQKIAEAREFI----------------------RNMQI--------------DASS 133
+ R ++ A+EFI +NM+I D+++
Sbjct: 798 MLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSAT 857
Query: 134 VV-----------WETL--------EKYAQTEPGLLLGEPSSSLR--------------- 159
V W+ EK + EPG E +S+
Sbjct: 858 YVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEI 917
Query: 160 ------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
L+ + + GY+ +L +L E K+ SE+LA+++GL+S P + +
Sbjct: 918 HEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINV 977
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRD 242
KNLR+C +CH +IK +S + NREIIVRD
Sbjct: 978 MKNLRVCNDCHAWIKFVSKVSNREIIVRD 1006
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 119/265 (44%), Gaps = 76/265 (28%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
R + V+P+ T + V++ C G VDEG F+ + ++ + + H+ ++DL GR
Sbjct: 333 RTMTEEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRS 392
Query: 115 QKIAEAREFIRNMQIDASSVVWETL-----------------EKYAQTEPG--------- 148
++ +A + I +M + + +W +L +K EPG
Sbjct: 393 GQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILS 452
Query: 149 -----------------LLL-----GEPS--------------SSLRLSNKKKD------ 166
L+L EP+ SS R +KKD
Sbjct: 453 NIYAAAGMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIK 512
Query: 167 --------AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
AG++P VL D+D E KE+ SE+LA+ +GL++TPPG T+++ KNLR
Sbjct: 513 EVYVDVKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLR 572
Query: 219 ICGECHNFIKKLSSIENREIIVRDK 243
IC +CHNF K +S + REI +RDK
Sbjct: 573 ICVDCHNFAKFVSKVYGREISLRDK 597
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 117/259 (45%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF---------LGIVD- 109
G+ PN TFVG++ C G VD+G +F S++ D+ + PT+EH+ G +D
Sbjct: 402 GIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDE 461
Query: 110 ---------------LYGRL---------QKIAE-------------AREFIRNMQIDAS 132
++G L ++AE + ++ I ++
Sbjct: 462 AHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSA 521
Query: 133 SVVWETLEKY--------AQTEPG------------LLLGEPSSSLR---------LSNK 163
S W+ EK Q PG L+G+ S L L
Sbjct: 522 SRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKD 581
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
K+AGY P TE+VL D+++E KE SE+LAVA+ LIST +R+ KNLR+CG+C
Sbjct: 582 LKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDC 641
Query: 224 HNFIKKLSSIENREIIVRD 242
H IK +S + REI++RD
Sbjct: 642 HEAIKHISKVTGREIVIRD 660
>gi|224122234|ref|XP_002318784.1| predicted protein [Populus trichocarpa]
gi|222859457|gb|EEE97004.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 137/303 (45%), Gaps = 73/303 (24%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
+++ A E+ D ++ + + + I L + L ++ + E + V P+ TF+G++T
Sbjct: 192 KIQTAKEIFDGVQRNNVCIWNAMISGLAVHGLALDAIKVFTKMEVENVLPDAITFLGILT 251
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
AC G V EG ++F+ + Y + P +EH+ +VDL GR + EA I++M ++
Sbjct: 252 ACSHCGLVKEGRKYFDLMRSRYSVQPHIEHYGAMVDLLGRAGLLEEAFAMIKSMPMEPDV 311
Query: 134 VVWETLEKYAQTEPGLLLGEPS---------------SSLRLSNKKKD------------ 166
V+W L +T LGE + S++ S K+ D
Sbjct: 312 VIWRALLGACRTYKKPELGEAAMANISRLRSGDYVLLSNIYCSQKRWDTAQGVWEMMKKK 371
Query: 167 -------------AGYM----------PYTEYVLRDLD---------------------- 181
AG++ P TE + + L+
Sbjct: 372 GVHKVRGKSCFEWAGFLHPFKAGDRSHPETEAIYKMLEGLIQRTKLAGYVPTTDLVTMDV 431
Query: 182 -QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIV 240
+E KE + SE+LA+AYG++ T G +RI KNLRIC +CH++IK +S + +R IIV
Sbjct: 432 SEEEKEGNLYHHSEKLALAYGILKTTSGAEVRISKNLRICYDCHSWIKIVSRLLSRVIIV 491
Query: 241 RDK 243
RD+
Sbjct: 492 RDR 494
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 105/221 (47%), Gaps = 52/221 (23%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE ++ ++G P+ TFVGV++AC G V+ G Q F S+ DYDI+P L+H+ ++D
Sbjct: 452 LELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMID 511
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE-------------PSS 156
L GR EA ++NM++ +W +L + + LGE P +
Sbjct: 512 LLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGA 571
Query: 157 SLRLSN------------------------KKKD---------------AGYMPYTEYVL 177
+ LSN K +D G +P T VL
Sbjct: 572 YVLLSNIYATAGRWDDVARIRTKLNDKGMKKXQDIYKMLDEIDQSFGERPGXVPDTSEVL 631
Query: 178 RDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
D+D+E KE ++ SE+LA+A+GLIST P T+RI KNLR
Sbjct: 632 YDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLR 672
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
++ + V PN TFV ++ AC GA+D G + + + + ++D+Y +
Sbjct: 354 RKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAK 413
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLL-GEPSSSLRLSNKKKDAGYMP 171
I A++ M+ ++L + GL + G + +L L + +D G+ P
Sbjct: 414 CGNIEAAKQVFAGMKP-------KSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEP 465
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 131/309 (42%), Gaps = 76/309 (24%)
Query: 10 CREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFV 69
C+ V+ A D++KN + + I K LE + GVRPN+ TFV
Sbjct: 333 CKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392
Query: 70 GVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL----------YGRLQK--- 116
V+ AC G D G+ F ++ + + P LEH+ +VDL Y +QK
Sbjct: 393 SVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKM 452
Query: 117 ------------------------IAEAREF----------IRNMQIDASSVVWETLEKY 142
I+ AR F + I A S W+ +E+
Sbjct: 453 EPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERV 512
Query: 143 AQT--------EPGL------------LLGEPSSSLR---------LSNKKKDAGYMPYT 173
T PG L+G+ R L+ K +AGY+ T
Sbjct: 513 RMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNT 572
Query: 174 EYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSI 233
V D+D+E KE SE+LA+A+G+++T PG T+ + KNLR+C +CHN IK +S I
Sbjct: 573 SSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKI 632
Query: 234 ENREIIVRD 242
+RE +VRD
Sbjct: 633 VDREFVVRD 641
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 121/269 (44%), Gaps = 76/269 (28%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+ K+ GV PN T V V+ AC G V E +F S+ + I P EH+ ++D
Sbjct: 500 LQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMID 559
Query: 110 L-------------------------YGRLQKIA----------EAREFIRNMQ------ 128
L +G L A +A E + ++
Sbjct: 560 LLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGT 619
Query: 129 ------IDASSVVWETLEKY--------AQTEPGL------------LLGEPSSSL---- 158
I AS +W+ + + + EPG+ ++G+ S S
Sbjct: 620 HVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEI 679
Query: 159 -----RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
LS+ K AGY+P E L D+++ KE+ + SE+LAVA+GLI+TPPG +R+
Sbjct: 680 YAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRV 739
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRD 242
KKNLRIC +CH +K +S I +REIIVRD
Sbjct: 740 KKNLRICFDCHTVLKFISKIVSREIIVRD 768
>gi|296090683|emb|CBI41082.3| unnamed protein product [Vitis vinifera]
Length = 413
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 107/205 (52%), Gaps = 27/205 (13%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYG-------- 112
V P+ T V V++ACG GA+ G E + R+ I L+ +VD+Y
Sbjct: 199 VLPDKVTMVSVLSACGDVGALGMGKMIHECIERNR-IEIDLKLGTSLVDMYAKCGDIDNS 257
Query: 113 -RLQKIAEAREFIRNMQID----ASSV-VWETLEKYA---QTEPGLLLGEPSSSLRL--- 160
R K+ R ++N+ I +SS+ V + ++ Q+ P E LR+
Sbjct: 258 LRWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHP-----ESKKILRMLSE 312
Query: 161 -SNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+ + K GY P T VL+D D++ KE + SE+LA+A+GL+ST PG T+RI KNLR+
Sbjct: 313 ITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRV 372
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
C +CH IK +S R IIVRD+
Sbjct: 373 CDDCHIAIKLISRTYKRRIIVRDRN 397
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 121/273 (44%), Gaps = 79/273 (28%)
Query: 51 EAGKRF---ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH---- 103
EA K F E G++P+ TFVGV+ AC G +DEGF +F + +Y I P +EH
Sbjct: 321 EALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCM 380
Query: 104 -------------------------------FLGIVDLYGRLQKIAEAREFIRNMQ---- 128
LG ++G L+ AR I+ ++
Sbjct: 381 VDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHS 440
Query: 129 ----------------IDASSVVWETLEKYAQTEPGLLLGE---------------PSSS 157
+D +V L K + PG L E P S
Sbjct: 441 GDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSE 500
Query: 158 ------LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
+++ K GY+P T VL D+++E KE ++ +E++A+A+ L++TPPG +
Sbjct: 501 ETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPI 560
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
RI KNLR+C +CH IK +S + REIIVRD++
Sbjct: 561 RIMKNLRVCADCHLAIKLISKVFEREIIVRDRS 593
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 130/307 (42%), Gaps = 91/307 (29%)
Query: 12 EREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGV 71
ER+V + ++ L G LD+ D+ + +KL +G +PN +FV V
Sbjct: 599 ERDVYSWTVMIGGLAQHGRGLDALDLF------VKMKL---------EGFKPNGYSFVAV 643
Query: 72 ITACGCFGAVDEGFQHFESVTRDYDINPTLEH---------------------------- 103
++AC G VDEG + F S+T+DY I PT+EH
Sbjct: 644 LSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEP 703
Query: 104 -------FLGIVDLYGRLQ------------KIAEAREFIRNMQIDASSVVWE------- 137
LG YG L+ K A ++ I A++ WE
Sbjct: 704 GDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRS 763
Query: 138 -TLEKYAQTEPG------------LLLGEPSS--SLRLSNKKKD-------AGYMPYTEY 175
+ + EPG ++G+ S S + K KD GY+P T
Sbjct: 764 MMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRL 823
Query: 176 VLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIEN 235
VLR+ DQE KE+ SE+LA+ YGL+ TP +R+ KNLR+C +CH K +S +
Sbjct: 824 VLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTG 883
Query: 236 REIIVRD 242
REI+ RD
Sbjct: 884 REIVARD 890
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 121/273 (44%), Gaps = 79/273 (28%)
Query: 51 EAGKRF---ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH---- 103
EA K F E G++P+ TFVGV+ AC G +DEGF +F + +Y I P +EH
Sbjct: 321 EALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCM 380
Query: 104 -------------------------------FLGIVDLYGRLQKIAEAREFIRNMQ---- 128
LG ++G L+ AR I+ ++
Sbjct: 381 VDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHS 440
Query: 129 ----------------IDASSVVWETLEKYAQTEPGLLLGE---------------PSSS 157
+D +V L K + PG L E P S
Sbjct: 441 GDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSE 500
Query: 158 ------LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
+++ K GY+P T VL D+++E KE ++ +E++A+A+ L++TPPG +
Sbjct: 501 ETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPI 560
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
RI KNLR+C +CH IK +S + REIIVRD++
Sbjct: 561 RIMKNLRVCADCHLAIKLISKVFEREIIVRDRS 593
>gi|115476560|ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42409483|dbj|BAD09839.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623845|dbj|BAF23790.1| Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 113/272 (41%), Gaps = 77/272 (28%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF----- 104
+ A + GV P+ TF GV++AC G VDEGF+ F+ + +Y + P + H+
Sbjct: 314 ISAFEEMGRSGVAPDEQTFTGVLSACSHSGLVDEGFKFFDIMCYEYQLKPNVHHYGCMVD 373
Query: 105 -------------------------------LGIVDLYGRLQ------------KIAEAR 121
LG ++G + K +A
Sbjct: 374 LMGRAGLLDQAYELVVKDMRVAPDATIWRTLLGACRIHGHIDLGERVINHLIELKAQQAG 433
Query: 122 EFIRNMQIDASSVVWETL--------EKYAQTEPGLLLGEPSSSLR-------------- 159
+++ + A+ W + EK QT PG E + +
Sbjct: 434 DYVLLLNTYAAVEDWGKVAEVRKLMKEKGIQTTPGCTTVELNGEIHEFIAADASHPRKAE 493
Query: 160 -------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
++ + AGY+P L DLD E KE Y SE+LA+A+ L+ TP R +R
Sbjct: 494 IYEKLDEINKHLRIAGYVPNVSSELHDLDSEGKECALAYHSEKLAIAFALLVTPQHRPIR 553
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
+ KNLR+C +CHNF K S + +R +IVRD+T
Sbjct: 554 LAKNLRVCVDCHNFTKVFSGVYHRLVIVRDRT 585
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 112/259 (43%), Gaps = 76/259 (29%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+P+ T + V++ C G VDEG F++V ++ H+ I+DL GR ++ +A
Sbjct: 308 VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKA 367
Query: 121 REFIRNM-----------------------------------------------QIDASS 133
I NM I A++
Sbjct: 368 LNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAA 427
Query: 134 VVWE--------TLEKYAQTEPGL-------LLGEPSSSLRLSNKKKD------------ 166
+W+ LEK EPG ++ SS R KKD
Sbjct: 428 GMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDI 487
Query: 167 --AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
AG++P VL D+D E KE+ SE+LA+ +GL++TPPG T+R+ KNLRIC +CH
Sbjct: 488 KAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCH 547
Query: 225 NFIKKLSSIENREIIVRDK 243
NF K +S + REI +RDK
Sbjct: 548 NFAKFVSKVYEREISLRDK 566
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 111/262 (42%), Gaps = 77/262 (29%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
DG RPN TFV V++AC G VDEG Q F ++ ++Y + P++EH + +VD+ GR +
Sbjct: 314 DGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLN 373
Query: 119 EAREFIRNMQI-DASSVVWETLEKYAQTEPGLLLG-------------EPSSSLRLSNKK 164
EA +FI+N + + VW + + LG P + LSN
Sbjct: 374 EAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIY 433
Query: 165 KDAGYMPYTE----------------YVLRDLDQEA-------KEKPQT----------- 190
AG M E Y D+D + K P+T
Sbjct: 434 ALAGRMDRVEKIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELM 493
Query: 191 -----------------------------YRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
Y SE+LA+A+GL+ T G +RI KNLR+C
Sbjct: 494 SRCREAGYIPASESVMHEVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCE 553
Query: 222 ECHNFIKKLSSIENREIIVRDK 243
+CH IK +S I NREI VRD+
Sbjct: 554 DCHTAIKYISIIANREINVRDR 575
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHFLGIVDLYGRLQKIA 118
GV+P+ STFV +++AC GA+ GF E + R+ +D+N L ++++Y R ++
Sbjct: 214 GVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLG--TALMNMYSRCGNVS 271
Query: 119 EAREFIRNMQIDASSVVWETL 139
+ARE +M+ + + V W +
Sbjct: 272 KAREVFDSME-EKNIVAWTAM 291
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 112/259 (43%), Gaps = 76/259 (29%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+P+ T + V++ C G VDEG F++V ++ H+ I+DL GR ++ +A
Sbjct: 340 VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKA 399
Query: 121 REFIRNM-----------------------------------------------QIDASS 133
I NM I A++
Sbjct: 400 LNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAA 459
Query: 134 VVWE--------TLEKYAQTEPGL-------LLGEPSSSLRLSNKKKD------------ 166
+W+ LEK EPG ++ SS R KKD
Sbjct: 460 GMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDI 519
Query: 167 --AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
AG++P VL D+D E KE+ SE+LA+ +GL++TPPG T+R+ KNLRIC +CH
Sbjct: 520 KAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCH 579
Query: 225 NFIKKLSSIENREIIVRDK 243
NF K +S + REI +RDK
Sbjct: 580 NFAKFVSKVYEREISLRDK 598
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 118/272 (43%), Gaps = 76/272 (27%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH--- 103
L+ L+ + +++G +PN ++V V+TAC G VDEG + F S+T+DY I PT+EH
Sbjct: 808 LEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTC 867
Query: 104 --------------------------------FLGIVDLYGRLQ------------KIAE 119
LG YG L+ K
Sbjct: 868 MVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKS 927
Query: 120 AREFIRNMQIDASSVVWE--------TLEKYAQTEPG------------LLLGEPS---- 155
A ++ I A++ WE K + EPG ++G+ S
Sbjct: 928 ASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPES 987
Query: 156 ----SSLR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
+ L L + K GY+P T VLR+ DQE KE+ SE+LA+ YGL+ T
Sbjct: 988 KEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDP 1047
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+R+ KNLR+C +CH K +S I REI+ RD
Sbjct: 1048 IRVYKNLRVCSDCHTATKFISKITGREIVARD 1079
>gi|356510940|ref|XP_003524191.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Glycine max]
Length = 664
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 134/274 (48%), Gaps = 38/274 (13%)
Query: 6 LKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK-RFE----NDG 60
+ L + + ++++ + KN+G+ D I +L C L ++ G FE + G
Sbjct: 374 ITQLAKNGFAEDSIDLFTQFKNLGLKPDGQMFIGVLFACSVLGDIDEGMLHFESMSKDYG 433
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYG------RL 114
+ P+ + FV V+ G G +DE F+ E + + T E + + ++G R
Sbjct: 434 IVPSMTHFVSVVDMIGSIGHLDEAFEFIERMPMEPSAE-TWETLMNLCRVHGNTGLGDRC 492
Query: 115 QKIAEAREFIR-NMQIDASSVVWE----TLEKYAQTEPGLLLGEPSSSLR---------- 159
++ E + R N Q A V + T EK + L E S +R
Sbjct: 493 AELVEQLDSSRLNEQSKAGLVPVKASDLTKEKEKKNLASKNLLEVRSRVREYRAGDTSHP 552
Query: 160 -----------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPG 208
L ++ K+AGY+P T++VL D+DQE KE+ SERLAVAYGL+++P
Sbjct: 553 ENDKIYALLRGLKSQMKEAGYVPETKFVLHDIDQEGKEEALLAHSERLAVAYGLLNSPAR 612
Query: 209 RTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+R+ KNLR+CG+CH +K +S + RE+I+RD
Sbjct: 613 APMRVIKNLRVCGDCHTALKIISKLVGRELIIRD 646
>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
Length = 771
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 77/264 (29%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+ G PN TF+ V++AC G +++ ++HF S+ D+ + P +H+ +VDL GR ++
Sbjct: 492 DGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRL 551
Query: 118 AEARE-FIRNMQIDASSVVW-----------------ETLEKYAQTEP----GLLL---- 151
EA + +R+ +A V W ++ ++ EP G +L
Sbjct: 552 GEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNV 611
Query: 152 ----GEPSSSLRLSNKKKDAGYMPYT------------EYVLRDLD-------------- 181
G + R+ N+ K +G + E+++ D+
Sbjct: 612 YAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERL 671
Query: 182 ----QEAKEKPQT-----------------YRSERLAVAYGLISTPPGRTLRIKKNLRIC 220
+EA P T Y SERLA+A G+ISTPPG TLR+ KNLR+C
Sbjct: 672 HREIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVC 731
Query: 221 GECHNFIKKLSSIENREIIVRDKT 244
+CH K +S I R+IIVRD +
Sbjct: 732 SDCHAATKFISQIVGRQIIVRDTS 755
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 112/266 (42%), Gaps = 76/266 (28%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
R + ++P+ TFVG+++AC G +D G F S+T +Y I P LEH+ ++DL G
Sbjct: 389 RMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHS 448
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE-------------PSSSLRLS 161
EA E I M ++ V+W +L K + + LGE P S + LS
Sbjct: 449 GLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLS 508
Query: 162 NKKKDAGY------------------MP----------YTEYVLRD-------------- 179
N AG +P E+++ D
Sbjct: 509 NIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLE 568
Query: 180 ----LDQEAKEKPQT-----------------YRSERLAVAYGLISTPPGRTLRIKKNLR 218
L QEA P T + SE+LA+A+GLIST P L I KNLR
Sbjct: 569 EMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGLISTKPETKLTIVKNLR 628
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+C CH K +S I REII RD+T
Sbjct: 629 VCRNCHEATKLISKIYKREIIARDRT 654
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 134/282 (47%), Gaps = 58/282 (20%)
Query: 10 CREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR-----FENDGVRP- 63
CRE ALE D++K GI D +L+ C + L+E G++ + + G++P
Sbjct: 433 CRE-----ALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPM 487
Query: 64 --NWSTFV-----------------------------GVITACGCFGAVDEGFQHFESVT 92
++S FV +++AC V+ G + E+V
Sbjct: 488 VEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVL 547
Query: 93 R-DYDINPTLEHFLGIVDLYGR------LQKIAEAREFIRN-----MQIDASSVVWETLE 140
+ D D + I GR ++++ E R+ ++ +++D V+ +E
Sbjct: 548 KLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFH-VE 606
Query: 141 KYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAY 200
+ E + E +L+ + K+ GY+P T +VL D+D+E KE+ SERLA+ Y
Sbjct: 607 DKSHPESEQIYVELG---KLTEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITY 663
Query: 201 GLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
GL+ TPPG +RI KNLR+CG+CH K +S + REII RD
Sbjct: 664 GLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARD 705
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 111/265 (41%), Gaps = 76/265 (28%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K+ G PN TF+ ++ AC G DEG FE +T+ Y + P+++H+ IVDL GR
Sbjct: 257 KQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGR 316
Query: 114 LQKIAEAREFIRNM---------------------------------------------- 127
+ EA + I +M
Sbjct: 317 SGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLL 376
Query: 128 -QIDASSVVWETLEKYAQT--------EPGL------------LLGEPSSSLR------- 159
I A+S WE + K +T EPG+ G+ S S +
Sbjct: 377 SNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECL 436
Query: 160 --LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
+ + + GY P V D++ E KE + SE+LA+A+ +S P G +R+ KNL
Sbjct: 437 EEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNL 496
Query: 218 RICGECHNFIKKLSSIENREIIVRD 242
R+C +CH IK +S + REI+VRD
Sbjct: 497 RVCDDCHVAIKLMSKVIGREIVVRD 521
>gi|383164843|gb|AFG65217.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 64/83 (77%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+ GYMP T +VL DL++E KE Y SE+LA+A+G+ISTPPG ++RI KNLR
Sbjct: 49 LTEQIKEVGYMPDTNFVLHDLEEEHKEHVLCYHSEKLAIAFGIISTPPGSSIRIVKNLRA 108
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN IK +S I +REII+RD
Sbjct: 109 CGDCHNAIKFISRISSREIILRD 131
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 117/264 (44%), Gaps = 77/264 (29%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+ G PN TF+ V+ AC G +++ ++HF S+ D+ + P +H+ +VDL GR ++
Sbjct: 434 DGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRL 493
Query: 118 AEARE-FIRNMQIDASSVVW-----------------ETLEKYAQTEP----GLLL---- 151
EA + +R+ +A V W ++ ++ EP G +L
Sbjct: 494 GEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNV 553
Query: 152 ----GEPSSSLRLSNKKKDAGYMPYT------------EYVLRDLD-------------- 181
G + R+ N+ K +G + E+++ D+
Sbjct: 554 YAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERL 613
Query: 182 ----QEAKEKPQT-----------------YRSERLAVAYGLISTPPGRTLRIKKNLRIC 220
+EA P T Y SERLA+A G+ISTPPG TLR+ KNLR+C
Sbjct: 614 HREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVC 673
Query: 221 GECHNFIKKLSSIENREIIVRDKT 244
+CH K +S I R+IIVRD +
Sbjct: 674 SDCHAATKFISQIVGRQIIVRDTS 697
>gi|383164847|gb|AFG65219.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164871|gb|AFG65231.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164873|gb|AFG65232.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164875|gb|AFG65233.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 64/83 (77%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+ GYMP T +VL DL++E KE Y SE+LA+A+G+ISTPPG ++RI KNLR
Sbjct: 49 LTEQIKEVGYMPDTNFVLHDLEEEHKEHVLCYHSEKLAIAFGIISTPPGSSIRIVKNLRA 108
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN IK +S I +REII+RD
Sbjct: 109 CGDCHNAIKFISRISSREIILRD 131
>gi|361066847|gb|AEW07735.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164845|gb|AFG65218.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164849|gb|AFG65220.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164851|gb|AFG65221.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164853|gb|AFG65222.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164855|gb|AFG65223.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164859|gb|AFG65225.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164861|gb|AFG65226.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164863|gb|AFG65227.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164865|gb|AFG65228.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
gi|383164867|gb|AFG65229.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 64/83 (77%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+ GYMP T +VL DL++E KE Y SE+LA+A+G+ISTPPG ++RI KNLR
Sbjct: 49 LTEQIKEVGYMPDTNFVLHDLEEEHKEHVLCYHSEKLAIAFGIISTPPGSSIRIVKNLRA 108
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN IK +S I +REII+RD
Sbjct: 109 CGDCHNAIKFISRISSREIILRD 131
>gi|383164869|gb|AFG65230.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 64/83 (77%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+ GYMP T +VL DL++E KE Y SE+LA+A+G+ISTPPG ++RI KNLR
Sbjct: 49 LAEQIKEVGYMPDTNFVLHDLEEEHKEHVLCYHSEKLAIAFGIISTPPGSSIRIVKNLRA 108
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN IK +S I +REII+RD
Sbjct: 109 CGDCHNAIKFISRISSREIILRD 131
>gi|383164857|gb|AFG65224.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 64/83 (77%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+ GYMP T +VL DL++E KE Y SE+LA+A+G+ISTPPG ++RI KNLR
Sbjct: 49 LTEQIKEVGYMPDTNFVLHDLEEEHKEHVLCYHSEKLAIAFGIISTPPGSSIRIVKNLRA 108
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN IK +S I +REII+RD
Sbjct: 109 CGDCHNAIKFISRISSREIILRD 131
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 116/267 (43%), Gaps = 76/267 (28%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+R + GV+PN TF+ ++T C G V+EG +F S+ + Y + P EH+ ++DL GR
Sbjct: 399 ERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGR 458
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL-----------------EKYAQTEP---GLLL-- 151
++ EA+EFI M + ++ W + EK + EP G L+
Sbjct: 459 AGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLL 518
Query: 152 ---------GEPSSSLRL----SNKKKDAGY----MPYTEYVLRDLDQEAKEKPQTY--- 191
E S+R+ N KK GY + Y +V D K Y
Sbjct: 519 SNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKL 578
Query: 192 ----------------------------------RSERLAVAYGLISTPPGRTLRIKKNL 217
SER+AVA+ LIS P G+ + +KKNL
Sbjct: 579 DXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNL 638
Query: 218 RICGECHNFIKKLSSIENREIIVRDKT 244
R+C +CH+ IK +S + R+IIVRD +
Sbjct: 639 RVCVDCHSAIKFISKVTGRKIIVRDNS 665
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
G+ PN TF +I AC A+++G Q H + + ++D +P + L VD+YG+ +
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSIL--VDMYGKCGLLE 361
Query: 119 EAREFIRNMQIDASSVVWETL 139
A + + D + + W +L
Sbjct: 362 HAIQAFDEIG-DPTEIAWNSL 381
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 111/265 (41%), Gaps = 76/265 (28%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K+ G PN TF+ ++ AC G DEG FE +T+ Y + P+++H+ IVDL GR
Sbjct: 365 KQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGR 424
Query: 114 LQKIAEAREFIRNM---------------------------------------------- 127
+ EA + I +M
Sbjct: 425 SGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLL 484
Query: 128 -QIDASSVVWETLEKYAQT--------EPGL------------LLGEPSSSLR------- 159
I A+S WE + K +T EPG+ G+ S S +
Sbjct: 485 SNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECL 544
Query: 160 --LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
+ + + GY P V D++ E KE + SE+LA+A+ +S P G +R+ KNL
Sbjct: 545 EEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNL 604
Query: 218 RICGECHNFIKKLSSIENREIIVRD 242
R+C +CH IK +S + REI+VRD
Sbjct: 605 RVCDDCHVAIKLMSKVIGREIVVRD 629
>gi|115455577|ref|NP_001051389.1| Os03g0767700 [Oryza sativa Japonica Group]
gi|31415922|gb|AAP50943.1| hypothetical protein [Oryza sativa Japonica Group]
gi|40539080|gb|AAR87337.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711268|gb|ABF99063.1| expressed protein [Oryza sativa Japonica Group]
gi|113549860|dbj|BAF13303.1| Os03g0767700 [Oryza sativa Japonica Group]
gi|125588042|gb|EAZ28706.1| hypothetical protein OsJ_12720 [Oryza sativa Japonica Group]
gi|215707074|dbj|BAG93534.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 296
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 63/83 (75%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + + AGY+P T YVL D+D++AK + Y SERLA+A+GL+STPPG LR+ KNLRI
Sbjct: 196 LHEEIRAAGYVPDTRYVLHDIDEDAKARALMYHSERLAIAFGLVSTPPGTPLRVIKNLRI 255
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN +K ++ + REI+VRD
Sbjct: 256 CGDCHNAVKLIAKVTGREIVVRD 278
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 116/267 (43%), Gaps = 76/267 (28%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+R + GV+PN TF+ ++T C G V+EG +F S+ + Y + P EH+ ++DL GR
Sbjct: 399 ERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGR 458
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL-----------------EKYAQTEP---GLLL-- 151
++ EA+EFI M + ++ W + EK + EP G L+
Sbjct: 459 AGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLL 518
Query: 152 ---------GEPSSSLRL----SNKKKDAGY----MPYTEYVLRDLDQEAKEKPQTY--- 191
E S+R+ N KK GY + Y +V D K Y
Sbjct: 519 SNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKL 578
Query: 192 ----------------------------------RSERLAVAYGLISTPPGRTLRIKKNL 217
SER+AVA+ LIS P G+ + +KKNL
Sbjct: 579 DTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNL 638
Query: 218 RICGECHNFIKKLSSIENREIIVRDKT 244
R+C +CH+ IK +S + R+IIVRD +
Sbjct: 639 RVCVDCHSAIKFISKVTGRKIIVRDNS 665
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
G+ PN TF +I AC A+++G Q H + + ++D +P + L VD+YG+ +
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSIL--VDMYGKCGLLE 361
Query: 119 EAREFIRNMQIDASSVVWETL 139
+A + + D + + W +L
Sbjct: 362 QAIQAFDEIG-DPTEIAWNSL 381
>gi|125542459|gb|EAY88598.1| hypothetical protein OsI_10074 [Oryza sativa Indica Group]
Length = 296
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 63/83 (75%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + + AGY+P T YVL D+D++AK + Y SERLA+A+GL+STPPG LR+ KNLRI
Sbjct: 196 LHEEIRAAGYVPDTRYVLHDIDEDAKARALMYHSERLAIAFGLVSTPPGTPLRVIKNLRI 255
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN +K ++ + REI+VRD
Sbjct: 256 CGDCHNAVKLIAKVTGREIVVRD 278
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 116/267 (43%), Gaps = 76/267 (28%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+R + GV+PN TF+ ++T C G V+EG +F S+ + Y + P EH+ ++DL GR
Sbjct: 334 ERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGR 393
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL-----------------EKYAQTEP---GLLL-- 151
++ EA+EFI M + ++ W + EK + EP G L+
Sbjct: 394 AGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLL 453
Query: 152 ---------GEPSSSLRL----SNKKKDAGY----MPYTEYVLRDLDQEAKEKPQTY--- 191
E S+R+ N KK GY + Y +V D K Y
Sbjct: 454 SNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKL 513
Query: 192 ----------------------------------RSERLAVAYGLISTPPGRTLRIKKNL 217
SER+AVA+ LIS P G+ + +KKNL
Sbjct: 514 DTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNL 573
Query: 218 RICGECHNFIKKLSSIENREIIVRDKT 244
R+C +CH+ IK +S + R+IIVRD +
Sbjct: 574 RVCVDCHSAIKFISKVTGRKIIVRDNS 600
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
G+ PN TF +I AC A+++G Q H + + ++D +P + L VD+YG+ +
Sbjct: 239 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSIL--VDMYGKCGLLE 296
Query: 119 EAREFIRNMQIDASSVVWETL 139
+A + + D + + W +L
Sbjct: 297 QAIQAFDEIG-DPTEIAWNSL 316
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 64/83 (77%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS + KDAGY P T+YVL D+++E KE + SERLA+A+GLI+TPPG ++I KNLR+
Sbjct: 766 LSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRV 825
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH IK +S IE R+I+VRD
Sbjct: 826 CGDCHTVIKLISKIEGRDIVVRD 848
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 7/124 (5%)
Query: 47 LKLLEA--GKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF 104
LK+ E K E DG+ TF+GVI+AC G V+EG ++F+ + +DY I PT+EH+
Sbjct: 580 LKIFEEMRSKNLELDGI-----TFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHY 634
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKK 164
+VDLY R + +A + I M A + +W TL + + LGE ++ +S +
Sbjct: 635 SCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQP 694
Query: 165 KDAG 168
+D+
Sbjct: 695 QDSA 698
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 134/307 (43%), Gaps = 78/307 (25%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIEL-LNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
V+ AL + + L F + ++ L +N C + + L + V P+ T+VGV++
Sbjct: 314 VEMALSIFNTLPQRDKFTWTAMVVGLAINGCGE-EALNMFSQMLKASVTPDEVTYVGVLS 372
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYG--------------------- 112
AC G VDEG + F S+T + I P + H+ +VDL G
Sbjct: 373 ACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNS 432
Query: 113 ----------RLQKIAEARE----------------FIRNMQIDASSVVWETLEKYAQT- 145
R+ K AE E ++ I A+ W+ L + Q
Sbjct: 433 IVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVM 492
Query: 146 -------EPGLLLGEPSSSL---------------------RLSNKKKDAGYMPYTEYVL 177
PG L E + + ++++ K AGY P T V
Sbjct: 493 MDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVF 552
Query: 178 RDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENRE 237
D+ +E KE SE+LA+A+GLI++ PG T+RI KNLR+C +CH+ K +S + +RE
Sbjct: 553 LDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDRE 612
Query: 238 IIVRDKT 244
+IVRD+T
Sbjct: 613 VIVRDRT 619
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 117/259 (45%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL--------- 110
G++P+ +TFVG++ C G VD+G ++F ++ + + PT+EH+ +VDL
Sbjct: 400 GMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVE 459
Query: 111 ----------------YG------RLQKIAEAREFIRNMQID----------------AS 132
+G RL K + E + I+ ++
Sbjct: 460 AQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSA 519
Query: 133 SVVWETLEKY--------AQTEPG------------LLLGEPSSSLR---------LSNK 163
S W+ EK Q PG L+G+ S L L
Sbjct: 520 SHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKD 579
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
++AGY P TE+VL D+++E KE SE+LAVA+ LIST +R+ KNLR+CG+C
Sbjct: 580 LREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDC 639
Query: 224 HNFIKKLSSIENREIIVRD 242
H IK +S + REIIVRD
Sbjct: 640 HEAIKLVSKVTGREIIVRD 658
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 129/306 (42%), Gaps = 76/306 (24%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
V A++V +K ++ S I L + L+ + +GV+PN TF+ V+
Sbjct: 295 VDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKG 354
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNM----QID 130
C G V+EG +HF+S+ Y I P LEH+ +VD+YGR ++ EA FI +M +
Sbjct: 355 CSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVG 414
Query: 131 ASSVVWETLEKYAQTEPG------------------LLLG---------EPSSSLRLSNK 163
A S + Y E G +LL E SSLR + K
Sbjct: 415 AWSALLHACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMK 474
Query: 164 KKDAGYMP----------YTEYVLRD---------------------------------L 180
K +P E+++ D
Sbjct: 475 AKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYVANTNPVLF 534
Query: 181 DQEAKEKPQ--TYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREI 238
D E +EK + SE++A+A+GLIS +R+ NLRIC +CHN K +S I NREI
Sbjct: 535 DIEEEEKEDALSKHSEKVAIAFGLISLKGVVPIRVVMNLRICWDCHNVAKMISKIFNREI 594
Query: 239 IVRDKT 244
IVRD+
Sbjct: 595 IVRDRN 600
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 64/83 (77%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS + KDAGY P T+YVL D+++E KE + SERLA+A+GLI+TPPG ++I KNLR+
Sbjct: 670 LSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRV 729
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH IK +S IE R+I+VRD
Sbjct: 730 CGDCHTVIKLISKIEGRDIVVRD 752
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 7/124 (5%)
Query: 47 LKLLEA--GKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF 104
LK+ E K E DG+ TF+GVI+AC G V+EG ++F+ + +DY I PT+EH+
Sbjct: 484 LKIFEEMRSKNLELDGI-----TFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHY 538
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKK 164
+VDLY R + +A + I M A + +W TL + + LGE ++ +S +
Sbjct: 539 SCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQP 598
Query: 165 KDAG 168
+D+
Sbjct: 599 QDSA 602
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 110/261 (42%), Gaps = 77/261 (29%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH----------------- 103
V P+ TF GV++AC G VDEGF+ F+ + +Y + P + H
Sbjct: 321 VAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEA 380
Query: 104 -------------------FLGIVDLYGRLQ------------KIAEAREFIRNMQIDAS 132
LG ++G + K +A +++ + A+
Sbjct: 381 YEFVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAA 440
Query: 133 SVVWETL--------EKYAQTEPGLLLGEPSSSLR---------------------LSNK 163
W + E+ QT PG E + ++ + +
Sbjct: 441 VGEWSKVSEIRKLMQEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQ 500
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
+ AGY+P L DLD E KE TY SE+LA+A+ L+ TP R +R+ KNLR+C +C
Sbjct: 501 LRIAGYVPNVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDC 560
Query: 224 HNFIKKLSSIENREIIVRDKT 244
HNF K S+I R +IVRD+T
Sbjct: 561 HNFTKMFSAIYRRIVIVRDRT 581
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 110/261 (42%), Gaps = 77/261 (29%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH----------------- 103
V P+ TF GV++AC G VDEGF+ F+ + +Y + P + H
Sbjct: 335 VAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEA 394
Query: 104 -------------------FLGIVDLYGRLQ------------KIAEAREFIRNMQIDAS 132
LG ++G + K +A +++ + A+
Sbjct: 395 YEFVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAA 454
Query: 133 SVVWETL--------EKYAQTEPGLLLGEPSSSLR---------------------LSNK 163
W + E+ QT PG E + ++ + +
Sbjct: 455 VGEWSKVSEIRKLMQEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQ 514
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
+ AGY+P L DLD E KE TY SE+LA+A+ L+ TP R +R+ KNLR+C +C
Sbjct: 515 LRIAGYVPNVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDC 574
Query: 224 HNFIKKLSSIENREIIVRDKT 244
HNF K S+I R +IVRD+T
Sbjct: 575 HNFTKMFSAIYRRIVIVRDRT 595
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 115/258 (44%), Gaps = 75/258 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGF---------------QHFESVT----------RD 94
GV PN TFVG++TAC G V+EG+ QH+ V
Sbjct: 467 GVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEA 526
Query: 95 YDINPTLE---------HFLGIVDLYGRLQKIAEARE------------FIRNMQIDASS 133
YD T+ LG +Y + A E +++ + ASS
Sbjct: 527 YDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASS 586
Query: 134 VVWETL--------EKYAQTEPGLLLGEPSSSLR---------------------LSNKK 164
+W+++ EK + G L E + L+ L +
Sbjct: 587 RLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRL 646
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K+AG++P+ E VL DL+QE KE+ SERLA+AYGLIST PG TLRI KNLR C CH
Sbjct: 647 KEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCH 706
Query: 225 NFIKKLSSIENREIIVRD 242
+ K +S + NREI+VRD
Sbjct: 707 SATKLISKLVNREIVVRD 724
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 122/271 (45%), Gaps = 76/271 (28%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L+ + +G+ PN T V V++AC G V E + F + + + I PT EH+ +
Sbjct: 575 KALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACM 634
Query: 108 VDLYG-------------------------------RLQKIAE----AREFIRNMQ---- 128
VD+ G R+ K E A E + ++
Sbjct: 635 VDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKS 694
Query: 129 --------IDASSVVWETLEKYAQT--------EPGL------------LLGEPSSSLR- 159
I AS+ +W+ + K ++ EPG+ ++G+ S
Sbjct: 695 GTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSK 754
Query: 160 --------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
L + AGY+P E L D++Q KE+ + SE+LAVA+GLI+TPPG +
Sbjct: 755 EIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPI 814
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRD 242
R+KKNLR+C +CH K +S + +REIIVRD
Sbjct: 815 RVKKNLRVCIDCHTAFKFISKVASREIIVRD 845
>gi|357115222|ref|XP_003559390.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 306
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 63/83 (75%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + + AGY+P T +VL D+D++AK + Y SERLA+A+GL+STPPG LR+ KNLRI
Sbjct: 206 LHEEIRAAGYVPDTRFVLHDIDEDAKVQALMYHSERLAIAFGLVSTPPGTPLRVMKNLRI 265
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN +K ++ + REIIVRD
Sbjct: 266 CGDCHNAVKLMAKVTGREIIVRD 288
>gi|297821961|ref|XP_002878863.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297324702|gb|EFH55122.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 609
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 119/257 (46%), Gaps = 73/257 (28%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFL--------- 105
RF+ +G RP+ F G+ ACG G VDEG HFES++RDY I P++E ++
Sbjct: 339 RFKKEGNRPDAQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIVPSIEDYVSLVEMYSLP 398
Query: 106 GIVD--------------------------LYGRLQ---KIAEAREFIR----NMQ---- 128
G +D ++G L+ + AE E + N Q
Sbjct: 399 GFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDRCAEVVELLDPTRLNKQSREG 458
Query: 129 ---IDASSVVWETLEKYAQTEPGLLLGEPSSSLR-----------------LSNKKK--- 165
+ AS + E L+K + G+L G S+ L L N K
Sbjct: 459 FLPVKASDIEKEILKKRS----GILHGVKSTMLNFKAGDTNLPENDELFQLLRNLKMHMV 514
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
+ GY+ T+ L D+DQE+KE SER+A A +++TPP + + KNLR+C +CHN
Sbjct: 515 EMGYVADTKPALHDIDQESKETALLGHSERIAFARAVLNTPPRKPFTVMKNLRVCVDCHN 574
Query: 226 FIKKLSSIENREIIVRD 242
K ++ I RE+I+RD
Sbjct: 575 AWKIMAVIVGREVIMRD 591
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 76/264 (28%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ E GV+ N +TF+G++ +C G + +G ++F ++T+ Y I+P +EH+ +VDL R
Sbjct: 843 QMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRA 902
Query: 115 QKIAEAREFIRNMQIDASSVVWETL----EKYAQTEPG------LLLGEP---------- 154
+ EA + + +M + A++V+ L + + TE L+L EP
Sbjct: 903 GLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLS 962
Query: 155 -----------SSSLRLSNKKKDAGYMPYTEYV----------------------LRDLD 181
++ LRL K K +P +V + LD
Sbjct: 963 NIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 1022
Query: 182 Q-----------------------EAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+ E KE + SE+LA+A+ L+ T PG T+R+ KNLR
Sbjct: 1023 ELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLR 1082
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH IK +S I +REIIVRD
Sbjct: 1083 VCSDCHTAIKLVSRITHREIIVRD 1106
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 135/323 (41%), Gaps = 88/323 (27%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK------- 54
+N+ L R +V A+ E+ DK+ S D+I + M + GK
Sbjct: 449 MNAVLHMYARSGDVVASREIFDKMV-------SKDVISWNTMIMGYAIHGQGKTALEMFD 501
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ +G++PN STFV V+TAC G VDEG+ HF + ++Y + P +EH+ + DL GR
Sbjct: 502 EMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGRE 561
Query: 115 QKIAEAREFIRNMQIDASSVV--------------------------------------- 135
+ E +FI +M ID +S V
Sbjct: 562 GDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLS 621
Query: 136 --------WETLEKY--AQTEPGLLLGEPSSSLRLSNKKKD--AGYMPYTE--------- 174
WE +E+ E GL EP S + L + G M +++
Sbjct: 622 SMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSN 681
Query: 175 YVLRDLDQEAKEKPQTY--------------RSERLAVAYGLISTPPGRTLRIKKNLRIC 220
+ R +++ + Q+Y S RLAV +GLIS+ G + +KKN+RIC
Sbjct: 682 ILSRKIEETDDTRNQSYPVPVATRTTTMPNKHSVRLAVVFGLISSEIGSPILVKKNVRIC 741
Query: 221 GECHNFIKKLSSIENREIIVRDK 243
CH+ +K +S R I+V D
Sbjct: 742 NHCHHALKLISRYSGRRIVVGDS 764
>gi|358357216|gb|AEU08448.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 62/83 (74%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + +DAGY+P T YVL D++++ KE+ Y SERLA AYGL+STPPG +RI KNLRI
Sbjct: 59 LNQQIRDAGYVPDTRYVLHDMNEKQKEQVLCYHSERLATAYGLLSTPPGTPIRIMKNLRI 118
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN K +S + REII RD
Sbjct: 119 CGDCHNATKFISKVVAREIIARD 141
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 112/259 (43%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF--------------- 104
GV+P+ T VGV++AC G D G ++F S+ +DY I P +H+
Sbjct: 474 GVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEE 533
Query: 105 --------------------LGIVDLYGRLQKIAEAREFIRNMQ------------IDAS 132
LG ++G ++ +A E + M+ + A+
Sbjct: 534 AQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAA 593
Query: 133 SVVWETLEKY--------AQTEPGLLLGEPSSSLR---------------------LSNK 163
S W + K Q PG E + + L K
Sbjct: 594 SGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLK 653
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
K GY+ T+ VL D+++E K+ Y SE+LAVA+G+++ P G+ +R+ KNLR+C +C
Sbjct: 654 MKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDC 713
Query: 224 HNFIKKLSSIENREIIVRD 242
HN IK +S I R IIVRD
Sbjct: 714 HNAIKHISKIVGRLIIVRD 732
>gi|361066849|gb|AEW07736.1| Pinus taeda anonymous locus 0_10195_01 genomic sequence
Length = 136
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 62/83 (74%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+ GY P T +VL DL++E KE Y SE+LA+AYG+ISTPPG ++RI KNLR
Sbjct: 49 LTEQIKEVGYTPDTNFVLHDLEEEHKEHVLCYHSEKLAIAYGIISTPPGSSIRIVKNLRA 108
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN IK +S I REII+RD
Sbjct: 109 CGDCHNAIKFISRISTREIILRD 131
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 88/266 (33%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF--------------- 104
G+ P TF+G+++ACG G V EG+ F + +Y I P +EH+
Sbjct: 286 GLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQ 345
Query: 105 --------------------LGIVDLYGRL------------QKIAEAREFIRNMQIDAS 132
LG L+G++ Q +A + +I I A+
Sbjct: 346 AYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAA 405
Query: 133 SVVWETLEKY--------AQTEPGLLLGEPSSSLRLSNKK-------------------- 164
W+ + + + EPG SS+ ++NK
Sbjct: 406 VGNWDGVARLRTMMKDSGVKKEPG------CSSIEVNNKVHEFLAGGLNHPKRKEIYMML 459
Query: 165 -------KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
K GY P T+ VL D+ + KE+ SE+LA+A+GLI+T PG T++I KNL
Sbjct: 460 EEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNL 519
Query: 218 RICGECHNFIKKLSSIENREIIVRDK 243
R+C +CH K +S I R+I+VRD+
Sbjct: 520 RVCADCHEVTKLISKITGRKIVVRDR 545
>gi|356501900|ref|XP_003519761.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62890-like [Glycine max]
Length = 567
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE R NDGVRPN TFVGV+ AC G V EG ++F+ ++Y ++PT++H+ IVD
Sbjct: 263 LELFARMVNDGVRPNAVTFVGVLCACVHGGLVSEGNEYFKKRMKEYGVSPTIQHYGCIVD 322
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
LY R +I +A +++M ++ ++W G LL L + + GY
Sbjct: 323 LYSRAGRIEDAWSVVKSMPVEPDVMIW-----------GALLSGLGCMGTLKLRLEKHGY 371
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPG 208
T VL DLD+E KE + SE+LA+AY + T PG
Sbjct: 372 ERNTGEVLLDLDEEGKEFALSLHSEKLAIAYCFLRTSPG 410
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 88/266 (33%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF--------------- 104
G+ P TF+G+++ACG G V EG+ F + +Y I P +EH+
Sbjct: 352 GLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQ 411
Query: 105 --------------------LGIVDLYGRL------------QKIAEAREFIRNMQIDAS 132
LG L+G++ Q +A + +I I A+
Sbjct: 412 AYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAA 471
Query: 133 SVVWETLEKY--------AQTEPGLLLGEPSSSLRLSNKK-------------------- 164
W+ + + + EPG SS+ ++NK
Sbjct: 472 VGNWDGVARLRTMMKDSGVKKEPG------CSSIEVNNKVHEFLAGGLNHPKRKEIYMML 525
Query: 165 -------KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
K GY P T+ VL D+ + KE+ SE+LA+A+GLI+T PG T++I KNL
Sbjct: 526 EEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNL 585
Query: 218 RICGECHNFIKKLSSIENREIIVRDK 243
R+C +CH K +S I R+I+VRD+
Sbjct: 586 RVCADCHEVTKLISKITGRKIVVRDR 611
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 113/266 (42%), Gaps = 88/266 (33%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF--------------- 104
G+ P TF+G+++ACG G V EG+ F + +Y I P +EH+
Sbjct: 299 GLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQ 358
Query: 105 --------------------LGIVDLYGRL------------QKIAEAREFIRNMQIDAS 132
LG L+G++ Q +A + +I I A+
Sbjct: 359 AYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAA 418
Query: 133 SVVWETLEKY--------AQTEPGLLLGEPSSSLRLSNKK-------------------- 164
W+ + + + EPG SS+ ++NK
Sbjct: 419 VGNWDGVARLRTMMKDSGVKKEPG------CSSIEVNNKVHEFLAGGLNHPKRKEIYMML 472
Query: 165 -------KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
K GY P T+ VL D+ + KE+ SE+LA+A+GLI+T PG T++I KNL
Sbjct: 473 EEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNL 532
Query: 218 RICGECHNFIKKLSSIENREIIVRDK 243
R+C +CH K +S I R+I+VRD+
Sbjct: 533 RVCADCHEVTKLISKITGRKIVVRDR 558
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 116/209 (55%), Gaps = 18/209 (8%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFLG 106
+L EA + ++ ++P+ + + ++ AC G V+ G +++ ++++P + +++
Sbjct: 524 QLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNL---FELDPENVGYYVL 580
Query: 107 IVDLYGRLQK---IAEAREFIRNMQIDASSVVWETLE---------KYAQTEPGLLLGEP 154
+ ++Y ++ K + R +R + + W ++E QTEP E
Sbjct: 581 MSNMYAKIGKWDGVDAVRSLVRRQNLQKTPG-WSSMEVKGSVSVFYSGTQTEPHPQHEEI 639
Query: 155 SSSLR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
L L K K AGY+P +VL+D++++ KE+ SERLA+A+G+I+TPPG L I
Sbjct: 640 QRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHI 699
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRD 242
KNLR+CG+CH+ K +S I REIIVRD
Sbjct: 700 YKNLRVCGDCHSATKYISKITEREIIVRD 728
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L + + + ++P+ TFV ++ AC G VD+G F+ + Y I P +H+ +
Sbjct: 456 KALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCM 515
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VD+ GR ++ EA EFI++M I S VW L + + +G+ +S ++
Sbjct: 516 VDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENV 575
Query: 168 GY 169
GY
Sbjct: 576 GY 577
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 62/84 (73%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + K+ G++PYTE VL DL+ E KE+ ++ SER+AVAYGLIST PG TLRI KNLR
Sbjct: 626 RLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLR 685
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
C CH+ IK +S + REIIVRD
Sbjct: 686 ACVNCHSAIKLISKLVEREIIVRD 709
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV PN TF+G++TAC G V EG++ F + +D++I P EH+ +VDL GR + E
Sbjct: 452 GVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGE 510
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
A FI + I+ VW L + + LGE +++ S + G+
Sbjct: 511 ACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGH 560
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 117/258 (45%), Gaps = 75/258 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGF---------------QHFESVT----RDYDINPT 100
GV PN TF+G++TAC G V EG+ QH+ V R +N
Sbjct: 383 GVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQA 442
Query: 101 LEHFLGI-----VDLYG------------RLQKIAEAREFIRN----------MQIDASS 133
+ + + V ++G RL +IA + FI + + AS+
Sbjct: 443 YDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASA 502
Query: 134 VVWETLE--KYAQTEPGLL--LGEPSSSL-------------------------RLSNKK 164
+W + + T+ GL LG S + RL +
Sbjct: 503 HLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRL 562
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K AGY+P+ E VL DL+ E E+ + SERLAVAYG+IST PG TLRI KNLR C CH
Sbjct: 563 KAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCH 622
Query: 225 NFIKKLSSIENREIIVRD 242
+ IK +S + +REII+RD
Sbjct: 623 SAIKLISKLVDREIIIRD 640
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 117/258 (45%), Gaps = 75/258 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGF---------------QHFESVT----RDYDINPT 100
GV PN TF+G++TAC G V EG+ QH+ V R +N
Sbjct: 398 GVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQA 457
Query: 101 LEHFLGI-----VDLYG------------RLQKIAEAREFIRN----------MQIDASS 133
+ + + V ++G RL +IA + FI + + AS+
Sbjct: 458 YDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASA 517
Query: 134 VVWETLE--KYAQTEPGLL--LGEPSSSL-------------------------RLSNKK 164
+W + + T+ GL LG S + RL +
Sbjct: 518 HLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRL 577
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K AGY+P+ E VL DL+ E E+ + SERLAVAYG+IST PG TLRI KNLR C CH
Sbjct: 578 KAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCH 637
Query: 225 NFIKKLSSIENREIIVRD 242
+ IK +S + +REII+RD
Sbjct: 638 SAIKLISKLVDREIIIRD 655
>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 970
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 120/262 (45%), Gaps = 85/262 (32%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
P+ TFVGV++AC G ++EGF+HFES++ Y + P +EHF + DL GR ++ + +
Sbjct: 694 PDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLED 753
Query: 123 FIRNMQIDASSVVWETL-------------------EKYAQTEPG-----LLLGEPSSS- 157
FI M + + ++W T+ E Q EP +LLG ++
Sbjct: 754 FIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAG 813
Query: 158 ------------LRLSNKKKDAGY------------------MPYTEYVLRDLDQ----- 182
++ ++ KK+AGY P + + + L +
Sbjct: 814 GRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKM 873
Query: 183 ------------------EAKEKPQTYRSERLAVAYGLI----STPPGRTLRIKKNLRIC 220
E KE+ +Y SE+LAVA+ L ST P +RI KNLR+C
Sbjct: 874 RDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLP---IRIMKNLRVC 930
Query: 221 GECHNFIKKLSSIENREIIVRD 242
G+CH+ K +S IE R+II+RD
Sbjct: 931 GDCHSAFKHISKIEGRQIILRD 952
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 112/261 (42%), Gaps = 76/261 (29%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
N G+ P TF+ V+ AC G V EG + F S+ Y P+++H+ +VD+ GR +
Sbjct: 514 NSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHL 573
Query: 118 AEAREFIRNMQIDASSVVWETL-----------------EKYAQTEP-----GLLLGE-- 153
A +FI M I+ S VWETL EK + +P +LL
Sbjct: 574 QRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIH 633
Query: 154 -------PSSSLRLSNKKKDAGYMP--------YTEYVLRDLDQ---------------- 182
++++R + KK+ P T +V DQ
Sbjct: 634 SADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLE 693
Query: 183 ----EAKEKPQT-----------------YRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
EA +P+T SERLA+A+GLI+T PG +RI KNLR+C
Sbjct: 694 GKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCL 753
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH K +S I R I+VRD
Sbjct: 754 DCHTVTKLISKITERVIVVRD 774
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 76/275 (27%)
Query: 45 MDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF 104
M + LE+ + + DG +P T++ V+TAC ++EG QHF + + ++P +EH+
Sbjct: 449 MGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHY 508
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSS--LRLSN 162
++DL R + EA ++ M + ++V+W ++ + + L ++ L+L+
Sbjct: 509 GCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLKLAP 568
Query: 163 K---------------------------------KKDAGY------------------MP 171
+ KK AGY P
Sbjct: 569 EEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKKTAGYSSITVAGQVHKFVVNDQSHP 628
Query: 172 YTEYVLRDLDQEAKE------KPQTYR-----------------SERLAVAYGLISTPPG 208
+T ++ +++ A+ P T R SE++A+A+GLIS PP
Sbjct: 629 WTLEIITMMEEIARRLKSAGYSPATSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPN 688
Query: 209 RTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
+ I KNLR+C +CH+ IK +S + NREIIVRD+
Sbjct: 689 LPIHIMKNLRVCEDCHSAIKLISQLWNREIIVRDR 723
>gi|2244928|emb|CAB10350.1| hypothetical protein [Arabidopsis thaliana]
gi|7268320|emb|CAB78614.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 110/252 (43%), Gaps = 70/252 (27%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+ PN+ T +GV+ AC G V+EG ++ + Y + P H+ +VD+ GR ++ EA
Sbjct: 333 INPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEA 392
Query: 121 REFIRNMQIDA--SSVVWETL-----------------EKYAQTEPGLLLGEPSSSLRLS 161
E + +++ A +++W L ++ Q+ + E S SLRL
Sbjct: 393 YELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTRWEDSESLRLE 452
Query: 162 NKK--------------KDAGYMPYT---------------------------------- 173
K+ KD+ Y+ +
Sbjct: 453 MKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMI 512
Query: 174 ---EYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKL 230
V D+D+EAK++ + ERLA+AYGL+ P G T+RI NLR+C +CH K +
Sbjct: 513 TTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLI 572
Query: 231 SSIENREIIVRD 242
S I REI+VRD
Sbjct: 573 SEIVEREIVVRD 584
>gi|190612857|gb|ACE80806.1| pentatricopeptide repeat protein [Picea abies]
Length = 152
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 65/84 (77%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K AGY+P T +VL D+++E KE+ + SE+LA+A+GLI+TPPG T+RI KNLR
Sbjct: 58 RLSRQMKTAGYVPGTRFVLHDVEEEQKEQILCHHSEKLAIAFGLINTPPGTTIRIIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH+ K +S + REI+VRD
Sbjct: 118 VCGDCHSATKFISKVVGREIVVRD 141
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 110/191 (57%), Gaps = 14/191 (7%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH-FLGIVDLYGRLQKIAEAR 121
P+ S ++ ++ AC G VD G + E + Y+++P ++ + +LY ++ EAR
Sbjct: 395 PDSSAWLALLGACRMHGDVDRGARIAELI---YELDPEDSGPYILLSNLYSSTGRMDEAR 451
Query: 122 EFIRNMQIDA-------SSV-VWETLEKY-AQTEPGLLLGEPSSSL-RLSNKKKDAGYMP 171
+ M++ SS+ V + + ++ A + LG + + RL + K+AGY+
Sbjct: 452 RTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVKEAGYVA 511
Query: 172 YTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLS 231
VLRD+++E KE+ Y SERLA+A+GLISTPPG L I KNLR+C +CH +K +S
Sbjct: 512 DVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHAAVKAIS 571
Query: 232 SIENREIIVRD 242
+ R+I+VRD
Sbjct: 572 KVVGRKIVVRD 582
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ N TF+G++ AC G +G +F S+ RD+ + P EH+L ++DL GR ++
Sbjct: 324 GLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQL 383
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRD 179
+ + I +M + S W L + + G + L +D+G PY +L +
Sbjct: 384 SEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSG--PYI--LLSN 439
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIK 214
L + R+ + G+ P ++ +K
Sbjct: 440 LYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVK 474
>gi|302790766|ref|XP_002977150.1| hypothetical protein SELMODRAFT_53291 [Selaginella moellendorffii]
gi|300155126|gb|EFJ21759.1| hypothetical protein SELMODRAFT_53291 [Selaginella moellendorffii]
Length = 287
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 124/226 (54%), Gaps = 16/226 (7%)
Query: 28 IGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQH 87
+ +F ++I+LL L+L E + P+ S ++ ++ AC G VD G +
Sbjct: 49 VPVFEHYLNLIDLLGRSGQLQLSE--DLINSMPYEPDSSAWLALLGACRMHGDVDRGARI 106
Query: 88 FESVTRDYDINPTLEH-FLGIVDLYGRLQKIAEAREFIRNMQIDA-------SSV-VWET 138
E + Y+++P ++ + +LY ++ EAR + M++ SS+ V +
Sbjct: 107 AELI---YELDPEDSGPYILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVKDR 163
Query: 139 LEKY-AQTEPGLLLGEPSSSL-RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERL 196
+ ++ A + LG + + RL + K+AGY+ VLRD+++E KE+ Y SERL
Sbjct: 164 VHEFMAAQKLHPQLGRIHAEIERLKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERL 223
Query: 197 AVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
A+A+GLISTPPG L I KNLR+C +CH +K +S + R+I+VRD
Sbjct: 224 AIAFGLISTPPGTALHIVKNLRVCFDCHAAVKAISKVVGRKIVVRD 269
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 4/151 (2%)
Query: 64 NWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREF 123
N TF+G++ AC G +G +F S+ RD+ + P EH+L ++DL GR ++ + +
Sbjct: 15 NGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDL 74
Query: 124 IRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQE 183
I +M + S W L + + G + L +D+G PY +L +L
Sbjct: 75 INSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSG--PYI--LLSNLYSS 130
Query: 184 AKEKPQTYRSERLAVAYGLISTPPGRTLRIK 214
+ R+ + G+ P ++ +K
Sbjct: 131 TGRMDEARRTRKAMRLRGITKQPGLSSIEVK 161
>gi|302143669|emb|CBI22530.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 40/279 (14%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + R ++AA +V +++++ + + I + LE + G +
Sbjct: 246 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHQMLETGTK 305
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN T+V V++AC G + EG +HF S+ +++ I P +EH+ +VDL GR + EA E
Sbjct: 306 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 365
Query: 123 FIRNMQIDASSVVWETL----EKYAQTEPGLLLGE---------PSSSLRLSNKKKDAGY 169
FI +M + A ++VW TL + TE G E P++ + LSN AG
Sbjct: 366 FINSMPLMADALVWRTLLGACHVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 425
Query: 170 MPYTEYVLRDLDQE--AKEKPQTY-----RSERLAVAYGLISTPPGRTL---------RI 213
+ + + + KE ++ R R V G S P + +I
Sbjct: 426 WKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHV--GETSHPQAWQIYQELDQLASKI 483
Query: 214 KK---------NLRICGECHNFIKKLSSIENREIIVRDK 243
K+ NLR+CG+CH IK +S REI+VRD
Sbjct: 484 KEMGYIPDTDFNLRVCGDCHTAIKYISMATGREIVVRDS 522
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 55/291 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND--- 59
N+ + + + ALE+ +L++ G++ I LLN C L+E G+ F
Sbjct: 322 NAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEH 381
Query: 60 --GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK- 116
G+ P + ++ G G ++E F +S+T I P ++ ++ RL K
Sbjct: 382 EYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLT----ITPDAVMWVSLLAAC-RLHKN 436
Query: 117 ---------------IAEAREFIRNMQIDASSVVWETLEKY--------AQTEPG----- 148
+A + +I I A+ WE + + Q EPG
Sbjct: 437 MALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIE 496
Query: 149 -------LLLGEPSSSL---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYR 192
+ G+ S +++ K+ G++P TE VL DLD+ KEK
Sbjct: 497 IDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKEHGHVPQTELVLHDLDEATKEKALAVH 556
Query: 193 SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
SE+LAVA+GLIS+ PG T++I KNLR C +CH +K +S I +R+I+ RD+
Sbjct: 557 SEKLAVAFGLISSRPGSTIKIVKNLRACSDCHAVLKLISKITSRKIVFRDR 607
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 113/266 (42%), Gaps = 88/266 (33%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF--------------- 104
G +P TF+GV+ AC G V EG++ F S+ +Y I P +EH+
Sbjct: 168 GYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEE 227
Query: 105 --------------------LGIVDLYGRL------------QKIAEAREFIRNMQIDAS 132
LG L+G + Q +A + ++ I A+
Sbjct: 228 AYELVKNMEIDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAA 287
Query: 133 SVVWETL--------EKYAQTEPGLLLGEPSSSLRLSNKK-------------------- 164
+ WE + E + EPG SS+ ++NK
Sbjct: 288 AGNWEGVARVRTLMKESGFEKEPG------CSSIEVNNKVHEFLAGDLRHPKSREIYEML 341
Query: 165 -------KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
K GY P T+ VL DL+ KE+ SE+LA+A+GLI+T PG T++I KNL
Sbjct: 342 EEINGWLKTHGYTPQTDIVLHDLEDAQKERSLGVHSEKLALAFGLITTKPGTTIKIVKNL 401
Query: 218 RICGECHNFIKKLSSIENREIIVRDK 243
R+C +CH K +S I R++++RD+
Sbjct: 402 RVCADCHAVTKLISKITGRKVVMRDR 427
>gi|79563130|ref|NP_180129.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546773|sp|Q680H3.2|PP170_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g25580
gi|330252626|gb|AEC07720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 615
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 115/257 (44%), Gaps = 73/257 (28%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL---- 110
RF+ +G P+ F G+ ACG G VDEG HFES++RDY I P++E ++ +V++
Sbjct: 345 RFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALP 404
Query: 111 -------------------------------YGRLQ---KIAEAREFIR----NMQ---- 128
+G L+ AE EF+ N Q
Sbjct: 405 GFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREG 464
Query: 129 ---IDASSVVWETLEKYAQTEPGLLLGEPSSS-------------------LR-LSNKKK 165
+ AS V E+L+K G+L G SS LR L
Sbjct: 465 FIPVKASDVEKESLKK----RSGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMV 520
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
+ GY+ T L D+DQE+KE SER+A A ++++ P + + KNLR+C +CHN
Sbjct: 521 EVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHN 580
Query: 226 FIKKLSSIENREIIVRD 242
+K +S I RE+I RD
Sbjct: 581 ALKIMSDIVGREVITRD 597
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 133/282 (47%), Gaps = 58/282 (20%)
Query: 10 CREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR-----FENDGVRP- 63
CRE ALE +++K GI D +L+ C + L+E G++ + + G++P
Sbjct: 481 CRE-----ALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPM 535
Query: 64 --NWSTFV-----------------------------GVITACGCFGAVDEGFQHFESVT 92
++S FV +++AC V+ G + E+V
Sbjct: 536 VEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVL 595
Query: 93 R-DYDINPTLEHFLGIVDLYGR------LQKIAEAREFIRN-----MQIDASSVVWETLE 140
+ D D + I GR ++++ E R+ ++ +++D V+ +
Sbjct: 596 KLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVED 655
Query: 141 KYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAY 200
K + E + E +L+ + K+ GY+P T +VL D+D+E K + SERLA+ Y
Sbjct: 656 K-SHPEAKEIYAELG---KLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITY 711
Query: 201 GLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
GL+ TPPG +RI KNLR+CG+CH K +S + REII RD
Sbjct: 712 GLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARD 753
>gi|4874299|gb|AAD31361.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 567
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 115/257 (44%), Gaps = 73/257 (28%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL---- 110
RF+ +G P+ F G+ ACG G VDEG HFES++RDY I P++E ++ +V++
Sbjct: 297 RFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALP 356
Query: 111 -------------------------------YGRLQ---KIAEAREFIR----NMQ---- 128
+G L+ AE EF+ N Q
Sbjct: 357 GFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREG 416
Query: 129 ---IDASSVVWETLEKYAQTEPGLLLGEPSSS-------------------LR-LSNKKK 165
+ AS V E+L+K G+L G SS LR L
Sbjct: 417 FIPVKASDVEKESLKK----RSGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMV 472
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
+ GY+ T L D+DQE+KE SER+A A ++++ P + + KNLR+C +CHN
Sbjct: 473 EVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHN 532
Query: 226 FIKKLSSIENREIIVRD 242
+K +S I RE+I RD
Sbjct: 533 ALKIMSDIVGREVITRD 549
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 132/279 (47%), Gaps = 57/279 (20%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVG 70
K AL + +++ G+ + I +LN C KL++ G F + G++PN
Sbjct: 351 KDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCC 410
Query: 71 VITACGCFGAVDEGFQHFESVT-----------------------------RDYDINPTL 101
++ G G +D+ +S+ R +++P
Sbjct: 411 MVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNH 470
Query: 102 E-HFLGIVDLY---GRLQKIAEAREFIRNMQIDASSV-----VWETLEKYA---QTEPGL 149
++ + ++Y GR ++AE R +R Q+ + + +T+ ++ + P L
Sbjct: 471 GGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQL 530
Query: 150 -----LLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIS 204
LGE +S + K AGY P T VL D+D+E KE + SE+LA+A+GLI
Sbjct: 531 EMIYAKLGE------MSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIK 584
Query: 205 TPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
T PG T+RI KNLR+C +CH+ K +S I NREIIVRD+
Sbjct: 585 TDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDR 623
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 65/140 (46%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
V+ ALEV K+K + S I L L + E GV+PN TF+G++
Sbjct: 318 SVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILN 377
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
AC VDEG F S+T Y + P H +VDLYGR + +A+ I++M +S
Sbjct: 378 ACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNS 437
Query: 134 VVWETLEKYAQTEPGLLLGE 153
+W L + LGE
Sbjct: 438 AIWGALLNACRIHGDTELGE 457
>gi|51969930|dbj|BAD43657.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 615
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 115/257 (44%), Gaps = 73/257 (28%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL---- 110
RF+ +G P+ F G+ ACG G VDEG HFES++RDY I P++E ++ +V++
Sbjct: 345 RFKEEGDIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALP 404
Query: 111 -------------------------------YGRLQ---KIAEAREFIR----NMQ---- 128
+G L+ AE EF+ N Q
Sbjct: 405 GFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREG 464
Query: 129 ---IDASSVVWETLEKYAQTEPGLLLGEPSSS-------------------LR-LSNKKK 165
+ AS V E+L+K G+L G SS LR L
Sbjct: 465 FIPVKASDVEKESLKK----RSGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMV 520
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
+ GY+ T L D+DQE+KE SER+A A ++++ P + + KNLR+C +CHN
Sbjct: 521 EVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHN 580
Query: 226 FIKKLSSIENREIIVRD 242
+K +S I RE+I RD
Sbjct: 581 ALKIMSDIVGREVITRD 597
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 72/258 (27%), Positives = 111/258 (43%), Gaps = 77/258 (29%)
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR-------- 113
+PN TF+ + AC G VD G + F S+ R++ + PT + VD+ GR
Sbjct: 594 KPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAY 653
Query: 114 ------------------------------LQKIA----------EAREFIRNMQIDASS 133
L +IA EA ++ I +++
Sbjct: 654 SIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAA 713
Query: 134 VVWET--------LEKYAQTEPG------------LLLGE---PSSSL------RLSNKK 164
+WE ++ EPG + GE P S+L L +
Sbjct: 714 GLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWERM 773
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
++ GY P T VL D+++ K Y SE+LA+A+GL+ TPPG T+R+ KNLR+C +CH
Sbjct: 774 RNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCH 833
Query: 225 NFIKKLSSIENREIIVRD 242
K +S + REI++RD
Sbjct: 834 EAAKFISRMVGREIVLRD 851
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 55/291 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----E 57
N+ + + + ALE+ +L++ G++ I LLN C L++ G +F E
Sbjct: 333 NAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEE 392
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK- 116
+ P + ++ G G ++E F +S+T I P ++ ++ RL K
Sbjct: 393 EYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMT----IAPDTVMWVSLLAAC-RLHKN 447
Query: 117 ---------------IAEAREFIRNMQIDASSVVWETLEKY--------AQTEPG----- 148
+A + +I I A+ WE + + Q EPG
Sbjct: 448 MALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIE 507
Query: 149 -------LLLGEPSSSL---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYR 192
+ G+ S +++ K+ G++P TE VL DLD+ KEK
Sbjct: 508 VGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVH 567
Query: 193 SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
SE+LAVA+GLIST PG T++I KNLR C +CH +K +S I R+I+ RD+
Sbjct: 568 SEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDR 618
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 55/291 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----E 57
N+ + + + ALE+ +L++ G++ I LLN C L++ G +F E
Sbjct: 332 NAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEE 391
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK- 116
+ P + ++ G G ++E F +S+T I P ++ ++ RL K
Sbjct: 392 EYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMT----IAPDTVMWVSLLAAC-RLHKN 446
Query: 117 ---------------IAEAREFIRNMQIDASSVVWETLEKY--------AQTEPG----- 148
+A + +I I A+ WE + + Q EPG
Sbjct: 447 MALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIE 506
Query: 149 -------LLLGEPSSSL---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYR 192
+ G+ S +++ K+ G++P TE VL DLD+ KEK
Sbjct: 507 VGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVH 566
Query: 193 SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
SE+LAVA+GLIST PG T++I KNLR C +CH +K +S I R+I+ RD+
Sbjct: 567 SEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDR 617
>gi|242054359|ref|XP_002456325.1| hypothetical protein SORBIDRAFT_03g034010 [Sorghum bicolor]
gi|241928300|gb|EES01445.1| hypothetical protein SORBIDRAFT_03g034010 [Sorghum bicolor]
Length = 763
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 78/252 (30%), Positives = 110/252 (43%), Gaps = 64/252 (25%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD------------------ 96
RF+ G +P+ F V ACG G+V+EG HFES+ +D+
Sbjct: 494 RFKQTGDKPDLGMFRHVFLACGILGSVNEGMLHFESMQKDFGIHPTMEHYASIISMLGQS 553
Query: 97 --------------INPTLE---------HFLGIVDLYGRLQKIAEAREFIR-NMQ---- 128
+ P++E G ++L R +I E + R N Q
Sbjct: 554 GYIAEAYEFVEQMPVEPSIEVWENLMNMCRLNGFLELGDRCAQIIERLDSSRLNEQSKMG 613
Query: 129 ---IDASSVVWETLEKYAQTEPG------LLLGEPS--------SSLR-LSNKKKDAGYM 170
+DAS + E K A G+ S LR L K+AGY+
Sbjct: 614 LFPVDASDLAKEKERKKASVAEARSKVHEYRAGDRSHPDTPKIYEELRYLLAHMKEAGYI 673
Query: 171 PYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKL 230
T +VL D+DQE KE SERLA++YGLI++ P +R+ KNLR CG+CH K +
Sbjct: 674 ADTRFVLHDVDQETKEDALLAHSERLAISYGLITSAPRSPIRVIKNLRSCGDCHTAFKII 733
Query: 231 SSIENREIIVRD 242
S + R+II RD
Sbjct: 734 SKLVGRQIIARD 745
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 112/261 (42%), Gaps = 77/261 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G RPN TFV V++AC G +D+G + F S+ Y + P +EH + +VD++GR + +
Sbjct: 322 GPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLND 381
Query: 120 AREFIRN-MQIDASSVVWETLEKYAQTEPGLLLG-------------EPSSSLRLSN--- 162
A +FI+ + + VW ++ + LG P + LSN
Sbjct: 382 AYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYA 441
Query: 163 -------------------KKKDAGY------------------MPYTEYVLRDLD---- 181
KK GY P T + R LD
Sbjct: 442 LAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMC 501
Query: 182 -------------------QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
+E ++ Y SE+LA+A+GL+ T G T+RI KNLRIC +
Sbjct: 502 RCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICED 561
Query: 223 CHNFIKKLSSIENREIIVRDK 243
CH+ IK +S I +REIIVRDK
Sbjct: 562 CHSAIKHISIIADREIIVRDK 582
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 75/300 (25%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
NS + + + K ALEV D+++ + +D+ I ++ C L+E G+++ N +
Sbjct: 565 NSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMIN 624
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD------------- 109
+ ++ +H+ + Y LE +GI++
Sbjct: 625 DH---------------HINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRT 669
Query: 110 LYG--RLQKIAE----AREFIRNMQIDASSVVWETLEKYA-------------------- 143
L G R+ + E A E + ++Q + S+ YA
Sbjct: 670 LLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKV 729
Query: 144 QTEPG------------LLLGEPSSSL---------RLSNKKKDAGYMPYTEYVLRDLDQ 182
+ EPG L G+ + L LS + KDAGY P T+ V D++
Sbjct: 730 KKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIED 789
Query: 183 EAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
E KE ++ SERLA+A+GLI+TPP ++I KNLR+CG+CHNF K +S +E R I+VRD
Sbjct: 790 EQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRD 849
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 127/278 (45%), Gaps = 89/278 (32%)
Query: 51 EAGKRFEN---DG-VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
EA K FE DG P+ TFVGV++AC G ++EGF+HFES++ Y + P +EHF
Sbjct: 703 EALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSC 762
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL-------------------EKYAQTEP 147
+ D+ GR ++ + +FI M + + ++W T+ E Q EP
Sbjct: 763 MADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEP 822
Query: 148 G-----LLLGEPSSS-------------LRLSNKKKDAGY------------------MP 171
+LLG ++ ++ ++ KK+AGY P
Sbjct: 823 ENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHP 882
Query: 172 YTEYVLRDLDQ------EAKEKPQT-----------------YRSERLAVAYGLI----S 204
+ + + L + +A PQT Y SE+LAVA+ L S
Sbjct: 883 DADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSS 942
Query: 205 TPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
T P +RI KNLR+CG+CH+ K +S IE R+II+RD
Sbjct: 943 TLP---IRIMKNLRVCGDCHSAFKYISKIEGRQIILRD 977
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 127/272 (46%), Gaps = 46/272 (16%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF----ENDGVRPNWSTFVGV 71
K A + D++ GI + + +L C +LL+ GK + + P S + +
Sbjct: 359 KEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATI 418
Query: 72 ITACGCFGAVDEGFQHFE-----------------------------SVTRDYDINPTL- 101
+ G G +D+ E + R ++++P+
Sbjct: 419 VDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYP 478
Query: 102 -EHFLGIVDLY---GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSS 156
H L + ++Y GR + +A+ R+ +++ + + W +E + P
Sbjct: 479 GTHTL-LANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQK 537
Query: 157 SL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
+L+ K K+ GY+P T +VL +DQ+ KE Y SE+LA+++ L++TPPG T
Sbjct: 538 EKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGST 597
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KN+R+CG+CH+ IK +S + REIIVRD
Sbjct: 598 IRIMKNIRVCGDCHSAIKYVSLVVKREIIVRD 629
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 112/261 (42%), Gaps = 77/261 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G RPN TFV V++AC G +D+G + F S+ Y + P +EH + +VD++GR + +
Sbjct: 386 GPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLND 445
Query: 120 AREFIRN-MQIDASSVVWETLEKYAQTEPGLLLG-------------EPSSSLRLSN--- 162
A +FI+ + + VW ++ + LG P + LSN
Sbjct: 446 AYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYA 505
Query: 163 -------------------KKKDAGY------------------MPYTEYVLRDLD---- 181
KK GY P T + R LD
Sbjct: 506 LAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMC 565
Query: 182 -------------------QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
+E ++ Y SE+LA+A+GL+ T G T+RI KNLRIC +
Sbjct: 566 RCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICED 625
Query: 223 CHNFIKKLSSIENREIIVRDK 243
CH+ IK +S I +REIIVRDK
Sbjct: 626 CHSAIKHISIIADREIIVRDK 646
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 129/273 (47%), Gaps = 47/273 (17%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
+ ALE+ + N GI + I LL C L++ G + + GVRP+ +
Sbjct: 285 REALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTC 344
Query: 71 VITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQ-- 128
++ G G +D+ + E++ + D FLG ++ ++ +A + + ++Q
Sbjct: 345 MVDLLGRAGRLDQALRLIENMEVEKD-EGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQ 403
Query: 129 ----------IDASSVVWETLEKY--------AQTEPGLLLGE-----------PSSSLR 159
I A++ W+ + K + PG E +S LR
Sbjct: 404 NPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLR 463
Query: 160 ----------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
LS K + AGY+P T VL D+D+E K SE+LA+A+GLI+TP G
Sbjct: 464 SNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGT 523
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KNLR+CG+CH+F K +S+I R+IIVRD
Sbjct: 524 PIRITKNLRVCGDCHSFCKLVSAITQRDIIVRD 556
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 119/273 (43%), Gaps = 83/273 (30%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA F N V P+ T++GV+ AC VD+G F ++T + I PT+ H+ +
Sbjct: 366 EALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCM 421
Query: 108 VDLYGRLQKIAEAREFI----------------------RNMQ----------------- 128
VDL G + + EA E I +N+Q
Sbjct: 422 VDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQILELEPENG 481
Query: 129 --------IDASSVVWETL--------EKYAQTEPGLLLGEPSSSL-------------- 158
I A+S WE L E+ + PG L E + ++
Sbjct: 482 AVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSK 541
Query: 159 ----RLSNKKKD---AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
+L N + AGY P T V DL +E KE SE+LA+AY LIS+ PG T+
Sbjct: 542 EIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGVTI 601
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
RI KNLR+C +CH+ K +S NRE+IV+DKT
Sbjct: 602 RIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKT 634
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 51/288 (17%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----E 57
NS + L + A+E+ +++ GI D + +L+ C L+E G R+ E
Sbjct: 495 NSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLE 554
Query: 58 NDGVRPNWSTFV--------------------------------GVITACGCFGAVDEGF 85
N G+ P + ++ C G +D G
Sbjct: 555 NYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGI 614
Query: 86 QHFESVTRDYDINPTLE-HFLGIVDLY---GRLQKIAEAREFIRNMQIDAS-SVVWETLE 140
E+ + + + P + ++ + ++Y GR +A R+ +R+ + + W +E
Sbjct: 615 ---EAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVE 671
Query: 141 KYAQ------TEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSE 194
T +L + +L+ + K GY+P T+YVL D++ E KE + SE
Sbjct: 672 NKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSE 731
Query: 195 RLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+LAVA+GL+ P G T+R+ KNLRICG+CHN IK +S + REI+VRD
Sbjct: 732 KLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRD 779
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
DG PN F G ITAC GA++ G Q H + V +D TL ++ +Y R +
Sbjct: 419 DGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHD--STLSVGNAMITMYARCGIV 476
Query: 118 AEAREFIRNMQIDASSVVWETL 139
AR M V W ++
Sbjct: 477 EAARTMFLTMPF-VDPVSWNSM 497
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 62/83 (74%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS + K AGY P T YV +D+D+E KE + SERLA+A+GLI TPPG L+I KNLR+
Sbjct: 380 LSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERLAIAFGLIGTPPGTPLQIVKNLRV 439
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ IK +S +E R+I+VRD
Sbjct: 440 CGDCHSVIKLISILEGRDIVVRD 462
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+ E DGV TF+GVI+AC G +EG ++F+ + +D+ I P +EH+ +VDLYGR
Sbjct: 203 QNLEMDGV-----TFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGR 257
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
+ +A E I M AS+ VW TL
Sbjct: 258 AGMLVKAMEIINEMPFPASANVWRTL 283
>gi|242032867|ref|XP_002463828.1| hypothetical protein SORBIDRAFT_01g006970 [Sorghum bicolor]
gi|241917682|gb|EER90826.1| hypothetical protein SORBIDRAFT_01g006970 [Sorghum bicolor]
Length = 304
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 62/83 (74%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + + AGY+P T +VL D+D++AK + Y SERLA+A+GL+ST PG LR+ KNLRI
Sbjct: 204 LHAQIRAAGYVPDTRHVLHDIDEDAKARALMYHSERLAIAFGLVSTSPGTPLRVMKNLRI 263
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN +K ++ + REI+VRD
Sbjct: 264 CGDCHNAVKLIAKVTGREIVVRD 286
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 108/259 (41%), Gaps = 78/259 (30%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR------- 113
V P+ TFVGV++AC G V+E + F + Y I PT++H+ ++D+ G
Sbjct: 362 VTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEA 421
Query: 114 -----------------------------------LQKIAE-----AREFIRNMQIDASS 133
LQK+ E A ++ I A S
Sbjct: 422 YDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQS 481
Query: 134 VVWET---------------------LEKYAQTEPGLLLGEPSSSL---------RLSNK 163
WE +E +T G L+G+ S RL
Sbjct: 482 GKWEKAARVRKLMTNRGLKKILACSWIELKGKTH-GFLVGDASHPRSDEIYGELERLEGL 540
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
DAGY+P V ++D + K SERLA+A+GLISTPPG L + KNLR+C +C
Sbjct: 541 MSDAGYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDC 600
Query: 224 HNFIKKLSSIENREIIVRD 242
H IK +S I REII+RD
Sbjct: 601 HVVIKLISQIVQREIIIRD 619
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 124/271 (45%), Gaps = 76/271 (28%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE + DG +PN +++ V+TAC ++EG +F+ + Y+I+P +EH+ ++D
Sbjct: 458 LEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMID 517
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVW--------------------ETLEKYAQTEPGL 149
L GR + EA + ++ M I ++V+W E L K E G+
Sbjct: 518 LLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGV 577
Query: 150 LL-----------GEPSSSLRL----SNKKKDAGYMPYT------EYVLRD--------- 179
+ E +S +R+ KK AGY T ++V+ D
Sbjct: 578 YVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEI 637
Query: 180 ------------------------LDQEAKEKPQTY--RSERLAVAYGLISTPPGRTLRI 213
+D + +EK Q SE+LA+A+GLI+ P + I
Sbjct: 638 IAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHI 697
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRDKT 244
+KNLR+C +CH+ IK +S + NREIIVRD++
Sbjct: 698 RKNLRVCEDCHSAIKLISRLWNREIIVRDRS 728
>gi|358357234|gb|AEU08457.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 62/84 (73%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + KDAGY+P T++VL D+++E KE + SERLA+A+GLIS P +RI KNLR
Sbjct: 58 RLSRRMKDAGYVPDTQFVLHDVEEERKELSLCHHSERLAIAFGLISMPTAMPIRIIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH IK +S I REI+VRD
Sbjct: 118 VCGDCHTAIKFISKIAGREIVVRD 141
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 53/291 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----E 57
N + L + +AA+E+ +++ + D + +L+ C L+E GK + E
Sbjct: 322 NCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTE 381
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP---TLEHFLGIVDLYGRL 114
G++P F ++ G G ++E + + +NP L +G ++G
Sbjct: 382 VLGLKPGMEHFGCMVDLLGRAGLLEEA----RKLINEMPVNPDAGVLGALVGACRIHGNT 437
Query: 115 Q-------KIAE-----AREFIRNMQIDASSVVWETLEKY--------AQTEPGLLLGEP 154
+ K+ E + ++ + AS+ WE + K + PG + E
Sbjct: 438 ELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIES 497
Query: 155 SSSL-------RLSNKKKDA--------------GYMPYTEYVLRDLDQEAKEKPQTYRS 193
S + R + K+ GY+P T+ VL D+D+E KE P Y S
Sbjct: 498 ESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHS 557
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
E+LA+A+GL+ T PG TLRI KNLRIC +CH K +S + +REII+RD+
Sbjct: 558 EKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRN 608
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 53/291 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----E 57
N + L + +AA+E+ +++ + D + +L+ C L+E GK + E
Sbjct: 267 NCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTE 326
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP---TLEHFLGIVDLYGRL 114
G++P F ++ G G ++E + + +NP L +G ++G
Sbjct: 327 VLGLKPGMEHFGCMVDLLGRAGLLEEA----RKLINEMPVNPDAGVLGALVGACRIHGNT 382
Query: 115 Q-------KIAE-----AREFIRNMQIDASSVVWETLEKY--------AQTEPGLLLGEP 154
+ K+ E + ++ + AS+ WE + K + PG + E
Sbjct: 383 ELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIES 442
Query: 155 SSSL-------RLSNKKKDA--------------GYMPYTEYVLRDLDQEAKEKPQTYRS 193
S + R + K+ GY+P T+ VL D+D+E KE P Y S
Sbjct: 443 ESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHS 502
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
E+LA+A+GL+ T PG TLRI KNLRIC +CH K +S + +REII+RD+
Sbjct: 503 EKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRN 553
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 125/274 (45%), Gaps = 79/274 (28%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L+ R DG P+ TFVGV++AC G V+EGF+HF+S++ Y ++P +EHF +
Sbjct: 624 KALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCM 683
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL---------------------------- 139
VDL GR K+ E +FI +M + + ++W T+
Sbjct: 684 VDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQ 743
Query: 140 ---------EKYAQTEPGLLLGEPSSSLRLSNKKKDAG------------------YMPY 172
YA E + + ++++ + KK+AG P
Sbjct: 744 NAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPE 803
Query: 173 TEYV---LRDLDQEAKEK---PQT-----------------YRSERLAVAYGLISTPPGR 209
+ + LR+L+++ ++ PQT Y SE++AVA+ +++
Sbjct: 804 KDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSAL 862
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
+RI KNLR+CG+CH+ +S I R+I++RD
Sbjct: 863 PIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDS 896
>gi|190612851|gb|ACE80803.1| pentatricopeptide repeat protein [Cycas revoluta]
Length = 152
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 64/84 (76%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + K+ GYMP+TE+VL D+++E KE+ Y SE+LA+A+GLISTP G +R+ KNLR
Sbjct: 58 RLTGEMKETGYMPHTEFVLHDVEEEQKEQFLFYHSEKLAIAFGLISTPAGTPIRVIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I REI++RD
Sbjct: 118 VCGDCHIATKFISRIVEREIVLRD 141
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 76/264 (28%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ E GV+ N +TF+G++ +C G + +G ++F ++T+ Y I+P +EH+ +VDL R
Sbjct: 364 QMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRA 423
Query: 115 QKIAEAREFIRNMQIDASSVVWETL----EKYAQTEPG------LLLGEPSSS------- 157
+ EA + + +M + A++V+ L + + TE L+L EP +S
Sbjct: 424 GLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLS 483
Query: 158 --------------LRLSNKKKDAGYMPYTEYV----------------------LRDLD 181
LRL K K +P +V + LD
Sbjct: 484 NIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 543
Query: 182 Q---------------------EAKEKPQT--YRSERLAVAYGLISTPPGRTLRIKKNLR 218
+ E +EK T + SE+LA+A+ L+ T PG T+R+ KNLR
Sbjct: 544 ELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLR 603
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH IK +S I +REIIVRD
Sbjct: 604 VCSDCHTAIKLVSRITHREIIVRD 627
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 14/193 (7%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG-IVDLYGRLQKIAE 119
V PN S + ++ AC G ++ + E + NP L I GR +
Sbjct: 163 VEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGK 222
Query: 120 AREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL---------RLSNKKKDAGY 169
R+ +++ + W +E + P ++G+ S L+ + K AGY
Sbjct: 223 VRKMMKDRSVKKEPGCSW--IEVQNKVHP-FIVGDSSHPQIEEIYETLETLTLQMKAAGY 279
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKK 229
+P T +VL D+++E KE + SE+LA+A+G+ISTPPG T+R+ KNLR+CG+CH K
Sbjct: 280 IPNTNFVLHDVEEEQKEWILGHHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKF 339
Query: 230 LSSIENREIIVRD 242
+S I +REI++RD
Sbjct: 340 ISRIVSREIVLRD 352
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 13/122 (10%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV+PN TFV V++ C G VDEG +F+S+TRD+ I+P EH+ +VDL+GR + E
Sbjct: 94 GVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDE 153
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE-------------PSSSLRLSNKKKD 166
A FI M ++ ++ VW +L + + L E P + + LSN
Sbjct: 154 ALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAA 213
Query: 167 AG 168
AG
Sbjct: 214 AG 215
>gi|358357224|gb|AEU08452.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 61/84 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K+AGYMP T +VL D+++E KE SE+LA+A+GLISTPP TLR+ KNLR
Sbjct: 58 RLSGQMKEAGYMPDTHFVLHDVEEEQKEDSLCPHSEKLAIAFGLISTPPRTTLRVIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I R I+VRD
Sbjct: 118 VCGDCHTATKFISKIVGRAIVVRD 141
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 124/272 (45%), Gaps = 45/272 (16%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
+ AL++ + GI + ++ LL C L+E G RF E+ VR + +
Sbjct: 416 RKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTC 475
Query: 71 VITACGCFGAVDEGFQHFESVTRDYD-----------------------INPTLE----- 102
V+ G G +DE + ES+T + D LE
Sbjct: 476 VVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQN 535
Query: 103 --HFLGIVDLY---GRLQKIAEAREFIRNMQIDA-SSVVW-ETLEKYAQTEPGLLLGEPS 155
H++ + ++Y GR + +A+ R+ + ++ W E K Q G S
Sbjct: 536 PGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRS 595
Query: 156 SSL-----RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
+ L NK + GY+P T +VL D+D+E K SE+LA+A+GLI+TP
Sbjct: 596 KEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTP 655
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KNLR+CG+CH F K +S+I R IIVRD
Sbjct: 656 IRIIKNLRVCGDCHTFCKLVSAITGRVIIVRD 687
>gi|302142563|emb|CBI19766.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 98/200 (49%), Gaps = 18/200 (9%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV+P+ TF+ +I A G VD+G Q F S+ DY I P LEH ++DL GR K+ E
Sbjct: 278 GVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGE 337
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEP--GLLLGEPSSSLRLSNKKKDAGYMPYTEYVL 177
A EFI +M I+ S +W L ++ GL + L L Y L
Sbjct: 338 AIEFIEDMAIEPDSCIWAALLTASKIHGNIGLAIRAGECLLELEPSNFSIHQQILQMYAL 397
Query: 178 RDLDQEAKEKPQ-------------TYRSERLAVAYGLI--STPPGRTLRIKKNLRICGE 222
++A ++ SE+LA+A+ LI S P R++RI KNLR+CG+
Sbjct: 398 SGKFEDAPDQHDRLFIEEEEKEEIGGVHSEKLALAFALIDPSCAP-RSVRIVKNLRMCGD 456
Query: 223 CHNFIKKLSSIENREIIVRD 242
CH K LS + + EI + D
Sbjct: 457 CHGTAKFLSMLYSCEIYLSD 476
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 129/293 (44%), Gaps = 59/293 (20%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGV- 61
NS + L + A+E+ D++ G+F D + +L C L+E G+ + N +
Sbjct: 495 NSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLE 554
Query: 62 ------------------------------------RPNWSTFVGVITACGCFGAVDEGF 85
+P + ++ C G +D G
Sbjct: 555 SYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGI 614
Query: 86 QHFESVTRDYDINPTLEHFLGIVDLY---GRLQKIAEAREFIRNMQI-DASSVVWETLEK 141
+ E + + N ++ + ++Y GR ++A+ R+ +R+ + + W +E
Sbjct: 615 EAAEQLFKLMPQNDGT--YVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVEN 672
Query: 142 YAQT-------EPGLLLGEPSSSLR----LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQT 190
P +L S R L + K GY+P T++VL D++ E KE +
Sbjct: 673 KVHVFMVDDDVHPEVL-----SVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALS 727
Query: 191 YRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
SE+LAV +G++ PPG T+R+ KN+RICG+CHN K +S + REIIVRD+
Sbjct: 728 THSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDR 780
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 2 LNSELKHLCREREVK---------AALEVMDKLKNIGIFLDSPDIIELLNVCMDL----- 47
L+++L HL E + A V++ +++ + + S D++ ++ L
Sbjct: 447 LHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGH 506
Query: 48 --KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFL 105
K +E + +GV P+ TF+ V+TAC G V++G +F S+ Y I P +H+
Sbjct: 507 GVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYA 566
Query: 106 GIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLG 152
+VDL+ R + AR I +M + VWE L + + LG
Sbjct: 567 RMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLG 613
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 111/259 (42%), Gaps = 76/259 (29%)
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD------------ 109
RPN TFVGV++AC G V+EG + F + I PT+E + +VD
Sbjct: 563 RPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAE 622
Query: 110 -----------------------LYGRLQKIAEARE------------FIRNMQIDASSV 134
+YG L A E +++ + A++
Sbjct: 623 LLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAG 682
Query: 135 VWETLEKY--------AQTEPGLLLGEPSSSL---------------------RLSNKKK 165
+WE + K + E G E L RL K
Sbjct: 683 MWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIK 742
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
GY+P T+ VL ++ ++ KE+ +Y SE+LA+AYG++S P G +RI KNLR+CG+CH+
Sbjct: 743 REGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHS 802
Query: 226 FIKKLSSIENREIIVRDKT 244
K +S + REII RD +
Sbjct: 803 ASKFISKVTGREIIARDAS 821
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 124/272 (45%), Gaps = 45/272 (16%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
+ AL++ + GI + ++ LL C L+E G RF E+ VR + +
Sbjct: 572 RKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTC 631
Query: 71 VITACGCFGAVDEGFQHFESVTRDYD-----------------------INPTLE----- 102
V+ G G +DE + ES+T + D LE
Sbjct: 632 VVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQN 691
Query: 103 --HFLGIVDLY---GRLQKIAEAREFIRNMQIDA-SSVVW-ETLEKYAQTEPGLLLGEPS 155
H++ + ++Y GR + +A+ R+ + ++ W E K Q G S
Sbjct: 692 PGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRS 751
Query: 156 SSL-----RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
+ L NK + GY+P T +VL D+D+E K SE+LA+A+GLI+TP
Sbjct: 752 KEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTP 811
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KNLR+CG+CH F K +S+I R IIVRD
Sbjct: 812 IRIIKNLRVCGDCHTFCKLVSAITGRVIIVRD 843
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 126/276 (45%), Gaps = 57/276 (20%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
AL++ +++K G+ D + LL+ C LLE G+R+ ++ + P + ++
Sbjct: 615 ALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMV 674
Query: 73 TACGCFGAVDEG-----FQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNM 127
G G +DE F++ TR + LG ++G + A E +
Sbjct: 675 DLLGRAGQLDEAEALIKTMPFQANTRIWGA------LLGACRIHGNVPVAERAAESSLKL 728
Query: 128 QID------------ASSVVWETLEKY--------AQTEPG---LLLGE----------- 153
+D A++ +W++ K EPG + +G+
Sbjct: 729 DLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRS 788
Query: 154 -PSSSL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTP 206
P S RL++ K GY+P T V+ D+D+ KE + SERLA+AYGLISTP
Sbjct: 789 HPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTP 848
Query: 207 PGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
PG + I KNLR+C +CH K +S I +REII RD
Sbjct: 849 PGTRIHIFKNLRVCPDCHTATKFISKIVDREIIARD 884
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 64/84 (76%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+LS + + GY+P TE+V DLD++ KE+ +Y SERLA+A+GL++T PG L I KNLR
Sbjct: 583 KLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLR 642
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH+ IK +S I +REI+VRD
Sbjct: 643 VCGDCHDAIKYISKIVDREIVVRD 666
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++P+ +TF +++A G V+EG F+ + ++ I PT +H + +VDL R + E
Sbjct: 408 GIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEE 467
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYM 170
A E + +M + + +W L L LGE + L ++ +D G +
Sbjct: 468 ANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVL 518
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 127/286 (44%), Gaps = 47/286 (16%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND--- 59
N+ + L VK AL + +++ GI D + LL C L+E G+R+ N
Sbjct: 380 NAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMEC 439
Query: 60 --GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+ P + ++ G G +DE Q +S+ + + LG L+ Q +
Sbjct: 440 VFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANA-IVWGALLGGCRLHRDTQLV 498
Query: 118 A------------EAREFIRNMQIDASSVVWETL--------EKYAQTEPG--------- 148
+ ++ I A+S WE E+ + PG
Sbjct: 499 EVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGV 558
Query: 149 ---LLLGEPSSSL---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERL 196
L+G+ S L L+ K AGY+P T++VL D+++E KE SE+L
Sbjct: 559 VHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKL 618
Query: 197 AVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
AVA+GLIST P + + KNLR+CG+CH IK +S I REIIVRD
Sbjct: 619 AVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRD 664
>gi|190612955|gb|ACE80855.1| pentatricopeptide repeat protein [Lepidogyna hodgsoniae]
Length = 152
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
R+S K+AGY+P T VL DLD+E KE SE+LA+A+GLISTPPG TLRI KNLR
Sbjct: 58 RISGLMKEAGYVPDTSLVLHDLDEEEKEVRLCRHSEKLAIAFGLISTPPGTTLRIFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ I REIIVRD
Sbjct: 118 VCSDCHTATKFIAKITGREIIVRD 141
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 110/261 (42%), Gaps = 76/261 (29%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
N G+ P TF+ V+ AC G V EG + F S+ Y P+++H+ +VD+ GR +
Sbjct: 514 NSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHL 573
Query: 118 AEAREFIRNMQIDASSVVWETL-----------------EKYAQTEP-----GLLLGE-- 153
A +FI M I VWETL EK + +P +LL
Sbjct: 574 QRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIH 633
Query: 154 -------PSSSLRLSNKKKDAGYMP--------YTEYVLRDLDQ---------------- 182
++++R + KK+ P T +V DQ
Sbjct: 634 SADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLE 693
Query: 183 ----EAKEKPQT-----------------YRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
EA +P+T SERLA+A+GLI+T PG +RI KNLR+C
Sbjct: 694 GKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCL 753
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH K +S I R I+VRD
Sbjct: 754 DCHTATKLISKITERVIVVRD 774
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 76/264 (28%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ E GV+ N +TF+G++ +C G + +G ++F ++T+ Y I+P +EH+ +VDL R
Sbjct: 819 QMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRA 878
Query: 115 QKIAEAREFIRNMQIDASSVVWETL----EKYAQTEPG------LLLGEPSSS------- 157
+ EA + + +M + A++V+ L + + TE L+L EP +S
Sbjct: 879 GLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLS 938
Query: 158 --------------LRLSNKKKDAGYMPYTEYV----------------------LRDLD 181
LRL K K +P +V + LD
Sbjct: 939 NIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 998
Query: 182 Q---------------------EAKEKPQT--YRSERLAVAYGLISTPPGRTLRIKKNLR 218
+ E +EK T + SE+LA+A+ L+ T PG T+R+ KNLR
Sbjct: 999 ELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLR 1058
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH IK +S I +REIIVRD
Sbjct: 1059 VCSDCHTAIKLVSRITHREIIVRD 1082
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 125/275 (45%), Gaps = 49/275 (17%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVG 70
+AALE+ ++++ +G+ + I L+ C LL+ GKR + G P +
Sbjct: 512 EAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGC 571
Query: 71 VITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE--AREFIR--- 125
++ G G +DE + +S+ +I FL L+ + K+ E A++F+
Sbjct: 572 MVDLLGRAGLLDEAHELIKSMPMRPNI-AVFGSFLAACKLHKNI-KLGEWAAKQFLSLEP 629
Query: 126 --------NMQIDASSVVWETLEKYAQT--------EPGLLLGEPSSSLR---------- 159
I AS+ W + + EPG+ E + L
Sbjct: 630 HKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHP 689
Query: 160 -----------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPG 208
+ K +DAGY P VL ++D+E K Y SE+LA+AYGLIST PG
Sbjct: 690 DAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPG 749
Query: 209 RTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
+RI KNLR+C +CHN K LS I REIIVRD+
Sbjct: 750 VPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDR 784
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 128/270 (47%), Gaps = 45/270 (16%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLL-EAGKRF----ENDGVRPNWSTFVGVI 72
ALE+ + G+ + I +L+ C + L+ EA K F +N G+ P + ++
Sbjct: 552 ALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMV 611
Query: 73 TACGCFGAVDEGFQHFESVTRDYDI--------------NPTL-EH-------------- 103
G G + E + S+ D D N L EH
Sbjct: 612 DLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPA 671
Query: 104 -FLGIVDLY---GRLQKIAEAREFIRNMQI--DASSVVWETLEKYAQTEPGLLLGEPSSS 157
++ + +LY GR + +A R+ ++ QI +A S E + + G L +
Sbjct: 672 TYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQ 731
Query: 158 L-----RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
+ L+ K K+ GY+P T++VL D++ E KE+ SE+LAVA+ LISTP + +R
Sbjct: 732 IYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIR 791
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRD 242
+ KNLR+CG+CH IK +S + REI+VRD
Sbjct: 792 VFKNLRVCGDCHTAIKYISMVSGREIVVRD 821
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Query: 10 CREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFV 69
C +E AAL+V + +++ + + I K LE GV+PN T++
Sbjct: 515 CGNKE--AALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYI 572
Query: 70 GVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQI 129
V++AC G +DE ++HF S+ ++ I P +EH+ +VDL GR ++EA EFI +M
Sbjct: 573 AVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPF 632
Query: 130 DASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDL 180
DA ++VW T + LGE ++ + L + D P T +L +L
Sbjct: 633 DADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHD----PATYILLSNL 679
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 118/260 (45%), Gaps = 76/260 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFL-------------- 105
G++P+ TFV +++AC G VDEG +F S+T ++ + +EH +
Sbjct: 849 GLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAE 908
Query: 106 --GIVD-------------------LYGRLQ--KIAEAREFIRNMQIDASSVV------- 135
G +D ++G L+ + A R F N D++ V+
Sbjct: 909 AEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCAS 968
Query: 136 ---WETLEKY-AQTEPGLLLGEPSSS-LRLSNK--------------------------- 163
W +E Q E L +P+ S ++L NK
Sbjct: 969 TQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKM 1028
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
++ G+MP T Y L+D D+E KE SER+A+A+GLI++ G LRI KNLR+CG+C
Sbjct: 1029 TREEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDC 1088
Query: 224 HNFIKKLSSIENREIIVRDK 243
H+ K +S I R+I+VRD
Sbjct: 1089 HSVFKLVSKIVGRKIVVRDS 1108
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 58/78 (74%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K GY+P T++VL D+D+E KE Y SE+LAVAYGL+ TP G ++I KNLRICG+CH
Sbjct: 826 KATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCH 885
Query: 225 NFIKKLSSIENREIIVRD 242
FIK +SS+ REI VRD
Sbjct: 886 TFIKFVSSVTKREIDVRD 903
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 77/151 (50%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGC 77
+L+V D ++ IF + I + + + + + GV PN TFVG++ AC
Sbjct: 603 SLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSH 662
Query: 78 FGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWE 137
G VDEG Q F+S++ DY + P LEH+ +VDL GR + A FI +M I+ SV+W
Sbjct: 663 SGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWS 722
Query: 138 TLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
L + + +G ++ S + +AG
Sbjct: 723 ALLGACKIHKNVEIGRRAAEKLFSIEPSNAG 753
>gi|358357198|gb|AEU08439.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 61/84 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS K+AGY+P T +VL D+++E KE + SE+LA+A+GLIST PG LRI KNLR
Sbjct: 58 RLSGWMKEAGYVPDTRFVLHDVEEEMKEFSLCHHSEKLAIAFGLISTHPGTPLRITKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I REI+VRD
Sbjct: 118 VCGDCHTATKFISKIVQREIVVRD 141
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 137/289 (47%), Gaps = 53/289 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLL-EAGKRFE---- 57
N+ L L + E K L++ ++K++GI D I +L+ C L+ EA K
Sbjct: 688 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG 747
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ-- 115
+ G++P + + A G G V + ES++ + + L + G +
Sbjct: 748 DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASAS-MYRTLLAACRVQGDTETG 806
Query: 116 -----KIAE-------AREFIRNMQIDASSVVWETLEKYAQT---------EPGLLLGEP 154
K+ E A + NM AS W+ + K A+T +PG E
Sbjct: 807 KRVATKLLELEPLDSSAYVLLSNMYAAASK--WDEM-KLARTMMKGHKVKKDPGFSWIEV 863
Query: 155 SSSLRL------SNKK---------------KDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
+ + + SN++ K GY+P T++ L D+++E KE+ Y S
Sbjct: 864 KNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHS 923
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
E+LAVA+GL+STPP +R+ KNLR+CG+CHN +K ++ + NREI++RD
Sbjct: 924 EKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRD 972
>gi|358357188|gb|AEU08434.1| pentatricopeptide repeat protein [Lejeunea cavifolia]
Length = 152
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 62/86 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS KDAGY+P T +VL D+++E K Y SE+LA+A+GL+STP G +RI KNLR
Sbjct: 58 RLSVLMKDAGYVPDTSFVLHDVEEEQKISRLLYHSEKLAIAFGLLSTPAGTPIRIFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+CG+CH K +S+I REIIVRD T
Sbjct: 118 VCGDCHTATKYISAIVGREIIVRDTT 143
>gi|51969704|dbj|BAD43544.1| putative protein [Arabidopsis thaliana]
Length = 537
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 60/248 (24%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
RF+ +G +P+ F + ACG G ++EG HFES+ ++Y I P +EH++ +V +
Sbjct: 272 RFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331
Query: 115 QKIAEAREFIRNM-------------------------------QIDASSVVWETLEKYA 143
+ EA F+ +M Q+DAS + E+
Sbjct: 332 GYLDEALRFVESMEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLV 391
Query: 144 QTEPGLLLGE--------PSSSLR---------------------LSNKKKDAGYMPYTE 174
+ L+ E P+ +R L + GY+P ++
Sbjct: 392 PVKSSDLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSK 451
Query: 175 YVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIE 234
L D+DQE+K++ +ER A + TP +R+ KNLR+C +CHN +K +S I
Sbjct: 452 LALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIV 511
Query: 235 NREIIVRD 242
RE+I RD
Sbjct: 512 GRELISRD 519
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 105/288 (36%), Gaps = 86/288 (29%)
Query: 5 ELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK---RFENDGV 61
EL +CRE +VK A+E++ +N G +D P + + +C D + L+ K F V
Sbjct: 152 ELDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWMAQLCGDAQALQEAKVVHEFITSSV 211
Query: 62 R----PNWSTFVGVITACG-------------------------CFGAVDEGFQHFESVT 92
+++ + + + CG CF +G ++ +
Sbjct: 212 GISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFS 271
Query: 93 RDY----------------------DINPTLEHFLGIVDLYGRL---------------- 114
R D+N L HF + YG +
Sbjct: 272 RFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL-------RLSNKKKDA 167
+ EA F+ +M+ + +WETL ++ L+LG+ + RL NK+ A
Sbjct: 332 GYLDEALRFVESMEPNVD--LWETLMNLSRVHGDLILGDRCQDMVEQLDASRL-NKESKA 388
Query: 168 GYMPY--TEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
G +P ++ V L + AK R +A G IS P R L +
Sbjct: 389 GLVPVKSSDLVKEKLQRMAKGPNYGIR----YMAAGDISRPENRELYM 432
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 122/272 (44%), Gaps = 80/272 (29%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+A + FEN +P+ TF+G+++AC +++G ++F+S+T + + PTL+H+ +
Sbjct: 406 DALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACM 465
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTE--------------------- 146
V+L GR +I +A I+NM D ++W TL T+
Sbjct: 466 VNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIA 525
Query: 147 -PGLLLGEPSSS-------------LRLSNKKKDAGY------------------MPYTE 174
P ++L +S ++ N KK AG+ P +E
Sbjct: 526 VPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESE 585
Query: 175 YVLRDLD------QEAKEKPQT-----------------YRSERLAVAYGLISTPPGRT- 210
+ L+ QE P T + SE+LA+A+GLI P G +
Sbjct: 586 DIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISP 645
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KN+RIC +CH F+K S I R+II+RD
Sbjct: 646 IRIIKNIRICNDCHEFMKFASRIIGRQIILRD 677
>gi|15236806|ref|NP_194971.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75209381|sp|Q9SUU7.1|PP346_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g32450, mitochondrial; Flags: Precursor
gi|4049347|emb|CAA22572.1| putative protein [Arabidopsis thaliana]
gi|7270149|emb|CAB79962.1| putative protein [Arabidopsis thaliana]
gi|50897242|gb|AAT85760.1| At4g32450 [Arabidopsis thaliana]
gi|332660662|gb|AEE86062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 60/248 (24%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
RF+ +G +P+ F + ACG G ++EG HFES+ ++Y I P +EH++ +V +
Sbjct: 272 RFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331
Query: 115 QKIAEAREFIRNM-------------------------------QIDASSVVWETLEKYA 143
+ EA F+ +M Q+DAS + E+
Sbjct: 332 GYLDEALRFVESMEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLV 391
Query: 144 QTEPGLLLGE--------PSSSLR---------------------LSNKKKDAGYMPYTE 174
+ L+ E P+ +R L + GY+P ++
Sbjct: 392 PVKSSDLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSK 451
Query: 175 YVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIE 234
L D+DQE+K++ +ER A + TP +R+ KNLR+C +CHN +K +S I
Sbjct: 452 LALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIV 511
Query: 235 NREIIVRD 242
RE+I RD
Sbjct: 512 GRELISRD 519
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 105/288 (36%), Gaps = 86/288 (29%)
Query: 5 ELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK---RFENDGV 61
EL +CRE +VK A+E++ +N G +D P + + +C D + L+ K F V
Sbjct: 152 ELDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSV 211
Query: 62 R----PNWSTFVGVITACG-------------------------CFGAVDEGFQHFESVT 92
+++ + + + CG CF +G ++ +
Sbjct: 212 GISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFS 271
Query: 93 RDY----------------------DINPTLEHFLGIVDLYGRL---------------- 114
R D+N L HF + YG +
Sbjct: 272 RFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL-------RLSNKKKDA 167
+ EA F+ +M+ + +WETL ++ L+LG+ + RL NK+ A
Sbjct: 332 GYLDEALRFVESMEPNVD--LWETLMNLSRVHGDLILGDRCQDMVEQLDASRL-NKESKA 388
Query: 168 GYMPY--TEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
G +P ++ V L + AK R +A G IS P R L +
Sbjct: 389 GLVPVKSSDLVKEKLQRMAKGPNYGIR----YMAAGDISRPENRELYM 432
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K GY+P T +V+ DLD E KE+ + SE+LA+AYGLISTPPG +RI KNLR+
Sbjct: 704 LKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRV 763
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH K +S I REII RD
Sbjct: 764 CTDCHTATKFISKITKREIIARD 786
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 15/184 (8%)
Query: 50 LEAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
LEA +R+E ++G+RPN +TFV V++AC V+EG + F +++DY I PT +H+
Sbjct: 515 LEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYAC 574
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD 166
+VD+ R + EA + I + + S+ +W L + + +GE ++ L + ++
Sbjct: 575 MVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQN 634
Query: 167 AG-YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
AG Y+ + K + + ER + PGR+ + I GE H+
Sbjct: 635 AGLYVSLSAIYAAAGMWRDVAKLRKFMKER------GVKKEPGRSW-----IEIAGEVHS 683
Query: 226 FIKK 229
F+ +
Sbjct: 684 FVAR 687
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 111/261 (42%), Gaps = 76/261 (29%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
G +P+ TF V++AC G +EG++ + S++ ++ I P +EH+ +V L R+ K+
Sbjct: 470 QSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKL 529
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE-------------PSSSLRLSN-- 162
EA I+ M + + VW L + L LGE P + + LSN
Sbjct: 530 EEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIY 589
Query: 163 --------------------KKKDAGY------------------MPYTEYVLRDLD--- 181
+K+ GY P + +L LD
Sbjct: 590 ASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLN 649
Query: 182 --------------------QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
++ KE+ SE+LAV GL++T PG+ L++ KNLRIC
Sbjct: 650 MQMKKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICD 709
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH IK +S +E REI VRD
Sbjct: 710 DCHAVIKVISRLEGREIYVRD 730
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 14/149 (9%)
Query: 1 DLNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCM----DLKLLEAGKRF 56
LN+ L L R V ALEV +K K+ + L+ ++ C DL+ LE +
Sbjct: 308 SLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDM 367
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRD-YDINPTLEHFLG--IVDLYG 112
+ GV PN T +I ACG A+ G + H S+ R +D + ++G ++D+Y
Sbjct: 368 QAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFD-----DVYVGSALIDMYA 422
Query: 113 RLQKIAEAREFIRNMQIDASSVVWETLEK 141
+ +I AR M + V W + K
Sbjct: 423 KCGRIQLARRCFDKMSA-LNLVSWNAVMK 450
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 52/273 (19%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF----ENDGVRPNWSTFVGVIT 73
AL++ ++++ G+ D I LL+ C L++ GK F + G++P+ + ++
Sbjct: 562 ALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVD 621
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLE---HFLGIVDLYGRLQ--KIAEAREF----- 123
G G ++ + +D ++P LG ++G ++ K A R F
Sbjct: 622 LLGRAGFLEMAYD----FIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSE 677
Query: 124 -----IRNMQIDASSVVWETLEK----------------------------YAQTEPGLL 150
+ I A+ WE ++K Y +
Sbjct: 678 NVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPK 737
Query: 151 LGEPSSSLR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
E + LR L+ K K GY+P +VL+D++++ KE T SERLA+A+G+ISTPP
Sbjct: 738 CKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKS 797
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KNLR+CG+CHN K +S I REI+VRD
Sbjct: 798 AIRIFKNLRVCGDCHNATKFISRITEREIVVRD 830
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 89/173 (51%), Gaps = 7/173 (4%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L+ + +++GV+P+ TF+ +++AC G VDEG + F + ++Y I P+L+H+ +
Sbjct: 561 KALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEG-KWFFHLMQEYGIKPSLKHYGCM 619
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VDL GR + A +FI++M + + +W L + + LG+ +S ++
Sbjct: 620 VDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENV 679
Query: 168 GYMPYTEYVLRDLDQ-EAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
GY + ++ + E +K ++ ER GL TP ++ + + + I
Sbjct: 680 GYYVLLSNIYANVGKWEGVDKVRSLARER-----GLKKTPGWSSIEVNRRVDI 727
>gi|190612779|gb|ACE80767.1| pentatricopeptide repeat protein [Ptilidium pulcherrimum]
Length = 152
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
R+ ++AGY+P T +VL D+D+E KEK SE+LA+A+GLISTPPG LRI KNLR
Sbjct: 58 RVYGMMREAGYVPDTRFVLHDVDEEGKEKHLCRHSEKLAIAFGLISTPPGTPLRIFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K ++ I R+IIVRD
Sbjct: 118 VCGDCHTATKFIAKIVGRDIIVRD 141
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 111/259 (42%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEG----------------FQHF--------------- 88
GV+PN TFVG+I AC G V +G QH+
Sbjct: 340 GVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDE 399
Query: 89 -ESVTRDYDINP---TLEHFLGIVDLYGRLQ------------KIAEAREFIRNMQIDAS 132
E++ R + P T L +G + K + +I I A
Sbjct: 400 AENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYAG 459
Query: 133 SVVWETLE--------KYAQTEPG------------LLLGEPSSSLR---------LSNK 163
+ +WE + K + PG GE S ++ L ++
Sbjct: 460 AGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQPMKDEILGLMTKLDSE 519
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
+ GY+P T VL D+DQ+ KE+ + SERLA+AYGL+ PG T+RI KNLR+CG+C
Sbjct: 520 MRRRGYVPDTSSVLLDMDQQEKERQLFWHSERLALAYGLLKAVPGTTIRIVKNLRVCGDC 579
Query: 224 HNFIKKLSSIENREIIVRD 242
H +K +S+I +REI VRD
Sbjct: 580 HTVLKLISAITSREIYVRD 598
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 136/289 (47%), Gaps = 53/289 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----E 57
N+ L L + E K AL++ +++++GI D I +L+ C L+ ++
Sbjct: 695 NAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHR 754
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ-- 115
+ G++P + + A G G V E +S++ + + L + G +
Sbjct: 755 DYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASAS-MYRTLLAACRVQGDTETG 813
Query: 116 -----KIAE-------AREFIRNMQIDASSVVWETLEKYAQT---------EPGLLLGEP 154
K+ E A + NM AS W+ + K A+T +PG E
Sbjct: 814 KRVATKLLELEPLDSSAYVLLSNMYAAASK--WDEM-KLARTMMKGHKVKKDPGFSWIEV 870
Query: 155 SSSLRL------SNKK---------------KDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
+ + L SN + K GY+P T++ L D+++E KE+ Y S
Sbjct: 871 KNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHS 930
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
E+LAVA+GL+STPP +R+ KNLR+CG+CHN +K +S + +REI++RD
Sbjct: 931 EKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRD 979
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 59/83 (71%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS + KD GY P T YVL+D+D E KE SERLA+A+GLI+TP G L I KNLR+
Sbjct: 767 LSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRV 826
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH IK ++ IE REI+VRD
Sbjct: 827 CGDCHLVIKLIAKIEEREIVVRD 849
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
+K L+ K + V+ + TF+GV AC G V+EG ++F+ + RD I PT EH
Sbjct: 578 MKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSC 637
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD 166
+VDLY R ++ +A + I NM A S +W T+ + LG ++ ++ K +D
Sbjct: 638 MVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPED 697
Query: 167 -AGYMPYTEYVLRDLDQEAKEKPQTYRSER 195
A Y+ + D + + K + +ER
Sbjct: 698 SAAYVLLSNMYAESGDWQERAKVRKLMNER 727
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 36/219 (16%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFLG 106
KL+EA + V+P+ + + ++ AC G V+ G + + +++ P ++
Sbjct: 220 KLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGER---AANNLFELEPKNAVPYVL 276
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLR--LSNKK 164
+ +LY K EA + R M++ S EPG E SS + +S +
Sbjct: 277 LSNLYSAAGKWEEAAKTRRLMKLRGVS-----------KEPGCSWIEMSSKVHRFMSEDR 325
Query: 165 -------------------KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIST 205
K+AGY+P + L D+D+E KE Y SE+LAVA+GL++
Sbjct: 326 SHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTM 385
Query: 206 PPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
PPG +RI KNLRICG+CH +K +S + +R +I+RD
Sbjct: 386 PPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSN 424
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 9/157 (5%)
Query: 56 FEND----GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLY 111
F NB GV+P++ TF+G++ AC G V+ G +F+S+ Y I P EH+ ++DL
Sbjct: 156 FYNBMIASGVKPDFITFIGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLL 215
Query: 112 GRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMP 171
GR K+ EA+E + M + + VW+ L + + LGE +++ + K+A +P
Sbjct: 216 GRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNA--VP 273
Query: 172 YTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPG 208
Y +L +L A + + ++ RL G +S PG
Sbjct: 274 YV--LLSNLYSAAGKWEEAAKTRRLMKLRG-VSKEPG 307
>gi|356515240|ref|XP_003526309.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 560
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 124/287 (43%), Gaps = 63/287 (21%)
Query: 19 LEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNW--------STFVG 70
LE+ ++ +G D + +L C + L G ++ V+ + +
Sbjct: 256 LELFGRMVVVGAVPDEVTVTSVLGACNQISALRLGASVQSYVVKRVFDEMPEKILAACTV 315
Query: 71 VITACGCFGAVDEGFQHF-----ESVTRDYDI-------NPTLEHFLGIVDLYGRLQKIA 118
++T G G E F + VT D I H+ +VDL GR +A
Sbjct: 316 MVTGFGIHGRGREAISIFYEMLGKGVTSDEGIFTARLQRGARATHYSCLVDLLGRAGYLA 375
Query: 119 EAREFIRNMQIDASSVVWETL-----------------EKYAQTEPG------------- 148
EA I NM++ + VW L +K + P
Sbjct: 376 EAYGVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSSYVCLSNTEM 435
Query: 149 ----LLLGEPS--------SSLR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSER 195
+G+ S + L+ L+ + K AGY P T VL D+++E KEK SER
Sbjct: 436 MVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSER 495
Query: 196 LAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
LA+A+ LI+T PG T+RI KNL +CG+CH IK +S + NREII+RD
Sbjct: 496 LALAFALINTGPGTTIRITKNLCVCGDCHTVIKMISRLTNREIIMRD 542
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 59/83 (71%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS + KD GY P T YVL+D+D E KE SERLA+A+GLI+TP G L I KNLR+
Sbjct: 371 LSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRV 430
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH IK ++ IE REI+VRD
Sbjct: 431 CGDCHLVIKLIAKIEEREIVVRD 453
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
+K L+ K + V+ + TF+GV AC G V+EG ++F+ + RD I PT EH
Sbjct: 182 MKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSC 241
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD 166
+VDLY R ++ +A + I NM A S +W T+ + LG ++ ++ K +D
Sbjct: 242 MVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPED 301
Query: 167 -AGYMPYTEYVLRDLDQEAKEKPQTYRSER 195
A Y+ + D + + K + +ER
Sbjct: 302 SAAYVLLSNMYAESGDWQERAKVRKLMNER 331
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 109/208 (52%), Gaps = 18/208 (8%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+L EA K E ++P + + ++ AC +D G E + + D + + H L +
Sbjct: 457 RLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIF-ELDPHDSGPHVL-L 514
Query: 108 VDLY---GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSLR---- 159
++Y GRL A+ R+ ++ + + W +E + + S +R
Sbjct: 515 SNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHV---FVANDDSHPMREEIQ 571
Query: 160 -----LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIK 214
+S K K+ GY+P T +VL ++Q+ +E Y SE+LA+A+ ++ TPPG T+RIK
Sbjct: 572 RMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIK 631
Query: 215 KNLRICGECHNFIKKLSSIENREIIVRD 242
KN+RICG+CH+ K S + REIIVRD
Sbjct: 632 KNIRICGDCHSAFKFASRVLGREIIVRD 659
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+PN TF+ V+TAC G +DEG +FE + + + I + H + +VDL GR ++ EA
Sbjct: 403 VQPNEITFLSVLTACSHSGLLDEGQYYFE-LMKKHKIEAQVAHHVTVVDLLGRAGRLNEA 461
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLG 152
+FI M I ++ VW L + + LG
Sbjct: 462 NKFIEEMPIKPTAAVWGALLGACRMHKNMDLG 493
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K+AG++P+TE VL DL+ E E+ SERLA+AYGLISTPPG TLRI KNLR
Sbjct: 646 LERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRA 705
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C CH IK +S + +REI+VRD
Sbjct: 706 CDNCHAAIKLISKLVSREIVVRD 728
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV PN TFVG++TAC G V+EG+ F + RDY I P +H+ +VDL GR +
Sbjct: 471 GVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLGRAGHLDR 529
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
A F+ NM I+ VW L + + LGE ++ S + G+
Sbjct: 530 AYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGH 579
>gi|358357238|gb|AEU08459.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 62/84 (73%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K+AGY+P T +VLRD+++E KE + SE+LA+++GLIST PG LR+ KNLR
Sbjct: 58 RLSGQMKEAGYVPDTRFVLRDVEEEQKEFSLCHHSEKLAISFGLISTAPGTPLRVIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I R I+VRD
Sbjct: 118 VCGDCHTATKFISKITGRAIVVRD 141
>gi|190612943|gb|ACE80849.1| pentatricopeptide repeat protein [Lepidogyna hodgsoniae]
Length = 152
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
R+S K+AGY+P T +VL D+D+E KE + SE+LA+A+GLISTPPG LRI KNLR
Sbjct: 58 RVSGLMKEAGYVPDTSFVLHDIDEENKEVRLCHHSEKLAIAFGLISTPPGTPLRIFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH ++ + REIIVRD
Sbjct: 118 VCGDCHTATMLIAKLVGREIIVRD 141
>gi|190612945|gb|ACE80850.1| pentatricopeptide repeat protein [Lepidogyna hodgsoniae]
Length = 152
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
R+S K+AGY+P T +VL D+D+E KE SE+LA+A+GLISTPPG LR+ KNLR
Sbjct: 58 RVSGLMKEAGYVPDTSFVLHDVDEEKKEVQLCRHSEKLAIAFGLISTPPGTPLRLFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K ++ + REIIVRD
Sbjct: 118 VCGDCHTATKFIAKMMGREIIVRD 141
>gi|358357236|gb|AEU08458.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K+AG MP T +VL D+++E K+ Y SE+LA+A+GLI TPPG LRI KNLR
Sbjct: 58 RLSGQMKEAGSMPDTRFVLHDVEEEMKKFSLCYHSEKLAIAFGLIKTPPGTPLRIIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I R I+VRD
Sbjct: 118 VCGDCHTATKFISKIVGRAIVVRD 141
>gi|190612789|gb|ACE80772.1| pentatricopeptide repeat protein [Radula complanata]
Length = 152
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + GYMP T +VLRDLD+E+K+ + SE+LA+ +GLISTPPG L I KNLR
Sbjct: 58 RLHQQITAVGYMPDTRFVLRDLDEESKQVRLRHHSEKLAITFGLISTPPGTPLLIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CHN IK +S + R+I VRD
Sbjct: 118 VCGDCHNAIKFISKVTERKITVRD 141
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 119/266 (44%), Gaps = 76/266 (28%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL---Y 111
+ E + + N TF+ ++ AC G ++G + F+ + Y + P LEH+ +VDL Y
Sbjct: 376 QMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRY 435
Query: 112 GRLQ-------------------------KIAEAREFIRNMQ------------------ 128
G ++ KI + E R +
Sbjct: 436 GSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLS 495
Query: 129 -IDASSVVWETL--------EKYAQTEPGL------------LLGEPS--------SSLR 159
I AS W+ + ++ + EPG+ +G+ S S LR
Sbjct: 496 NIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLR 555
Query: 160 -LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
L+++ K GY+P + VL D+D E KE + SE+LA+A+ L+ TP G +R+ KNLR
Sbjct: 556 ELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLR 615
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+C +CH IK +S I NREIIVRD +
Sbjct: 616 VCSDCHVAIKYISEISNREIIVRDSS 641
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 60/78 (76%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
++ GY+P TE+VL D++ E KE+ Y SE+LA+AYGLISTP T+R+ KNLR+CG+CH
Sbjct: 770 REDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCH 829
Query: 225 NFIKKLSSIENREIIVRD 242
N IK +S + REI++RD
Sbjct: 830 NAIKYISKVFEREIVLRD 847
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K ++ G+ P+ +F+G+++AC G E +++ S+ DY I P +EH+ +VD GR
Sbjct: 583 KSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGR 642
Query: 114 LQKIAEAREFIRNMQIDASSVV 135
+ EA + I M AS+ +
Sbjct: 643 AGLVQEADKVIETMPFKASASI 664
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 130/288 (45%), Gaps = 47/288 (16%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + L VKAA + +++ GI D + LL C L++ G+++ N R
Sbjct: 317 NAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMER 376
Query: 63 -----PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLY------ 111
P + ++ G G +DE Q +S+ + + LG L+
Sbjct: 377 VFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANA-IVWGALLGGCRLHRDTQLV 435
Query: 112 -GRLQKI-----AEAREFIRNMQIDASSVVWETL--------EKYAQTEPG--------- 148
G L+++ + + ++ I ++S WE E+ + PG
Sbjct: 436 EGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGV 495
Query: 149 ---LLLGEPSSSL---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERL 196
L+G+ S L L K +GY+P T+YVL D+++E KE SE+L
Sbjct: 496 VHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKL 555
Query: 197 AVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
A+A+GLIST P +R+ KNLR+CG+CH IK +S REIIVRD
Sbjct: 556 AIAFGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNN 603
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHFLGIVDLYGRLQK 116
N+G RP+ VGV+ AC GA++ G + R+ + NP L ++D+Y + +
Sbjct: 240 NEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLG--TALIDMYAKCGR 297
Query: 117 IAEAREFIRNMQIDASSVVWET 138
+ A E R M+ VVW
Sbjct: 298 MDSAWEVFRGMR-KKDIVVWNA 318
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 106/261 (40%), Gaps = 77/261 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA- 118
G P T V++AC G VD+G + +E++ RDY I P LEH+ IVD+ GR K+A
Sbjct: 347 GFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAE 406
Query: 119 ------------------------------EAREFIRNMQID----------------AS 132
E E + NM I+ A
Sbjct: 407 AENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYAC 466
Query: 133 SVVWETLE--------KYAQTEPGLLLGEPSSSLR----------------------LSN 162
+ WE LE K + PG L E + +
Sbjct: 467 AGQWEKLESLRDIMKEKLVKKPPGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILG 526
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
K + GY T D+D+E KE SE+LA+AYG++ T G T+RI KNLR+C +
Sbjct: 527 KIRLIGYKGNTGDAFFDVDEEEKETAIHMHSEKLAIAYGMMKTKTGTTIRIVKNLRVCED 586
Query: 223 CHNFIKKLSSIENREIIVRDK 243
CH K +S + RE IVRD+
Sbjct: 587 CHTATKLISEVYGREFIVRDR 607
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 10 CREREVKAALEVMDKLKNIGIFLDSPDIIELL-NVCMD--LKLLEAGKRFENDGVRPNWS 66
C+ V+ A E+ D++ + +F S I N C + + L E KR +GV N +
Sbjct: 196 CKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKR---EGVVANET 252
Query: 67 TFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG--IVDLYGRLQKIAEAREFI 124
V VI++C GA++ G + E V + + T+ LG +VD+Y R +I +A
Sbjct: 253 VMVSVISSCAHLGALEFGERAHEYVVKSH---MTVNLILGTALVDMYWRCGEIEKAIRVF 309
Query: 125 RNMQIDASSVVWETLEK 141
+ D S+ W ++ K
Sbjct: 310 EELP-DKDSLSWSSIIK 325
>gi|218200488|gb|EEC82915.1| hypothetical protein OsI_27839 [Oryza sativa Indica Group]
Length = 393
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 25/173 (14%)
Query: 81 VDEGFQHFESVTRDYDINP---TLEH-FLGIVDL----YGR-LQKIAEAREFIRNMQIDA 131
D+ + F ++ R+ ++ P TL LG +L +G+ + + RN+ +
Sbjct: 221 ADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTV-G 279
Query: 132 SSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTY 191
+S+++ EK Q L+ + K GY+P ++VL D+D+ K +
Sbjct: 280 TSLLYLIHEKLGQ---------------LAERMKAMGYVPDLDFVLHDVDETLKVQMLMR 324
Query: 192 RSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
SE+LA+++GLIST PG TLRI KNLR+CG+CHN K +S IE+REII+RD T
Sbjct: 325 HSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTT 377
>gi|297746380|emb|CBI16436.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 127/248 (51%), Gaps = 27/248 (10%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFE----NDGVRPNWSTFVGV 71
K A+++ +++K + + + LLN C KL+E G+ E N + P+ + + +
Sbjct: 288 KEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGREAEETVFNMPMAPDATIWGAL 347
Query: 72 ITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQ--- 128
+ AC ++ G Q + ++ D + H L + +LY + EA+ + ++
Sbjct: 348 LGACRIHKDIERG-QRIGKIIKELDSDHIGCHVL-LANLYSASGQWDEAKAVRQKIEVSG 405
Query: 129 ---------IDASSVVWETL---EKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYV 176
I+ + V + L + QT+ L + ++ K K+AGY+P V
Sbjct: 406 RKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLD-----EMTTKLKNAGYVPEFGEV 460
Query: 177 LRDLD-QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIEN 235
L D+D +E KE + SE+LA+A+GLI+TPPG +RI KNLR+C +CH K +S +
Sbjct: 461 LLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYK 520
Query: 236 REIIVRDK 243
REIIVRD+
Sbjct: 521 REIIVRDR 528
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 131/288 (45%), Gaps = 51/288 (17%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF----EN 58
N+ L L + + A+ + +K+ GI D I +L+ C L + N
Sbjct: 201 NAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPN 260
Query: 59 D-GVRPNWSTFVGVITACGCFGAVDEGFQHFESV--TRDYDINPTLEHFLGIVDLYGRLQ 115
D G+ P + ++ A G G V E + E++ IN L LG + G ++
Sbjct: 261 DYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRAL---LGACRIQGDVE 317
Query: 116 --KIAEAREF----------IRNMQIDASSVVWETL--------EKYAQTEPGLLLGEPS 155
K AR F + I A++ W+ + K + +PG +
Sbjct: 318 XGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVK 377
Query: 156 SSLRL------SNKKKDA---------------GYMPYTEYVLRDLDQEAKEKPQTYRSE 194
+ L L S+ + D GY+P TE+VL D++ E KE+ Y SE
Sbjct: 378 NMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSE 437
Query: 195 RLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+LA+AYGLISTP T+R+ KNLR+CG+CHN IK +S + REI++RD
Sbjct: 438 KLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRD 485
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/83 (51%), Positives = 61/83 (73%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K AGY+ T+ VL D+++E KE Y SE+LAVAYG+++ PPGR +R+ KNLR+
Sbjct: 655 LDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRV 714
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN K +S+IE R I++RD
Sbjct: 715 CGDCHNAFKYISAIEGRLILLRD 737
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 59/119 (49%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE +P+ T VGV+ AC G V++G +F S+ D+ + EH+ ++D
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
L GR ++AEA + +++M + S +W L ++ LG ++ + ++AG
Sbjct: 529 LLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAG 587
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/83 (51%), Positives = 61/83 (73%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K AGY+ T+ VL D+++E KE Y SE+LAVAYG+++ PPGR +R+ KNLR+
Sbjct: 655 LDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRV 714
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN K +S+IE R I++RD
Sbjct: 715 CGDCHNAFKYISAIEGRLILLRD 737
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 59/119 (49%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE +P+ T VGV+ AC G V++G +F S+ D+ + EH+ ++D
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
L GR ++AEA + +++M + S +W L ++ LG ++ + ++AG
Sbjct: 529 LLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAG 587
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 63/84 (75%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L + + GY+P TE+V DL++E KE+ +Y SERLA+A+GL++T PG L I KNLR
Sbjct: 580 KLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLR 639
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH+ IK +S I +REI+VRD
Sbjct: 640 VCGDCHDAIKYISKIADREIVVRD 663
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+RP+ +TF +++A G V+EG F + + I P +H++ +VDL R + E
Sbjct: 405 GMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEE 464
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRD 179
A + + +M+ + + +W L L LGE + L + D G + ++ +
Sbjct: 465 ASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLA----LVSN 520
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREII 239
L K+ + + +L G P ++ I+ G H F+ + S RE I
Sbjct: 521 LYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIR------GTRHVFVMEDQSHPQREEI 574
Query: 240 V 240
V
Sbjct: 575 V 575
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 45/274 (16%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEN-----DGVRPNWSTFVG 70
K A+ + +++ ++G+ D + +L+ C + L+E G+++ N + P S +
Sbjct: 493 KEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYAC 552
Query: 71 VITACGCFGAVDEGFQHFESVTRDYD-----------------------------INP-T 100
+I G G + E + ES+ + D I+P
Sbjct: 553 MIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGN 612
Query: 101 LEHFLGIVDLY---GRLQKIAEAREFIRNMQI-DASSVVWETL--EKYAQTEPGLLLGEP 154
+L + ++Y G+ + A+ R+ +++ + + W + E +A ++ +
Sbjct: 613 SGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQK 672
Query: 155 SSSLRLS----NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
+L + K G++P TE VL DL++E KE+ Y SE+LA+A+GL++TP
Sbjct: 673 DEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTA 732
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
LRI KNLR+C +CH+ IK +S + REIIVRD T
Sbjct: 733 LRIMKNLRVCNDCHSAIKFISKLVGREIIVRDAT 766
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 36/218 (16%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFLG 106
KL+EA + V+P+ + + ++ AC G V+ G + + +++ P ++
Sbjct: 566 KLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGER---AANNLFELEPKNAVPYVL 622
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLR--LSNKK 164
+ +LY K EA + R M++ S EPG E SS + +S +
Sbjct: 623 LSNLYSAAGKWEEAAKTRRLMKLRGVS-----------KEPGCSWIEMSSKVHRFMSEDR 671
Query: 165 -------------------KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIST 205
K+AGY+P + L D+D+E KE Y SE+LAVA+GL++
Sbjct: 672 SHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTM 731
Query: 206 PPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
PPG +RI KNLRICG+CH +K +S + +R +I+RD
Sbjct: 732 PPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDS 769
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 47/233 (20%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR----FENDGVRPNWS---TFVG 70
AL + +++ +GI D I +L+ C +L +LE GK+ F G+ + S + V
Sbjct: 426 ALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVS 485
Query: 71 VITACGCF-----------------------------------GAVDEGFQHFESVTRDY 95
+ CGC G V+ G +F+S+ Y
Sbjct: 486 MYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEVY 545
Query: 96 DINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPS 155
I P EH+ ++DL GR K+ EA+E + M + + VW+ L + + LGE +
Sbjct: 546 GIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERA 605
Query: 156 SSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPG 208
++ + K+A +PY +L +L A + + ++ RL G +S PG
Sbjct: 606 ANNLFELEPKNA--VPYV--LLSNLYSAAGKWEEAAKTRRLMKLRG-VSKEPG 653
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHFLG 106
K +E + +G+ N TF ++TACG A G Q + R + N F+G
Sbjct: 223 KAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANV----FVG 278
Query: 107 --IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+VD+Y + ++ AR + M++D V W ++
Sbjct: 279 SALVDMYSKCGDLSNARRMLETMEVD-DPVSWNSM 312
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 46 DLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHF 104
D++ LE + +G RPN T+ V+ C + +++G Q H ++ +D N +
Sbjct: 119 DVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFV--V 176
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDA-SSVVWETL-EKYAQTEPG 148
G+VD+Y + + I EA E++ + D + V+W + Y+Q G
Sbjct: 177 TGLVDMYAKCKCILEA-EYLFELAPDKRNHVLWTAMVTGYSQNGDG 221
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 36/219 (16%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFLG 106
KL+EA + V+P+ + + ++ AC G V+ G + + +++ P ++
Sbjct: 499 KLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGER---AANNLFELEPKNAVPYVL 555
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLR--LSNKK 164
+ +LY K EA + R M++ S EPG E SS + +S +
Sbjct: 556 LSNLYSAAGKWEEAAKTRRLMKLRGVS-----------KEPGCSWIEMSSKVHRFMSEDR 604
Query: 165 -------------------KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIST 205
K+AGY+P + L D+D+E KE Y SE+LAVA+GL++
Sbjct: 605 SHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTM 664
Query: 206 PPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
PPG +RI KNLRICG+CH +K +S + +R +I+RD
Sbjct: 665 PPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSN 703
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 84 GFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYA 143
G +F+S+ Y I P EH+ ++DL GR K+ EA+E + M + + VW+ L
Sbjct: 467 GRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAAC 526
Query: 144 QTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLI 203
+ + LGE +++ + K+A +PY +L +L A + + ++ RL G +
Sbjct: 527 RVHGNVELGERAANNLFELEPKNA--VPYV--LLSNLYSAAGKWEEAAKTRRLMKLRG-V 581
Query: 204 STPPG 208
S PG
Sbjct: 582 SKEPG 586
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHFLG 106
K +E + +G+ N TF ++TACG A G Q + R + N F+G
Sbjct: 223 KAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANV----FVG 278
Query: 107 --IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+VD+Y + ++ AR + M++D V W ++
Sbjct: 279 SALVDMYSKCGDLSNARRMLETMEVD-DPVSWNSM 312
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 46 DLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHF 104
D++ LE + +G RPN T+ V+ C + +++G Q H ++ +D N +
Sbjct: 119 DVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFV--V 176
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDA-SSVVWETL-EKYAQTEPG 148
G+VD+Y + + I EA E++ + D + V+W + Y+Q G
Sbjct: 177 TGLVDMYAKCKCILEA-EYLFELAPDKRNHVLWTAMVTGYSQNGDG 221
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 45/274 (16%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEN-----DGVRPNWSTFVG 70
K A+ + +++ ++G+ D + +L+ C + L+E G+++ N + P S +
Sbjct: 493 KEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYAC 552
Query: 71 VITACGCFGAVDEGFQHFESVTRDYD-----------------------------INP-T 100
+I G G + E + ES+ + D I+P
Sbjct: 553 MIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGN 612
Query: 101 LEHFLGIVDLY---GRLQKIAEAREFIRNMQI-DASSVVWETL--EKYAQTEPGLLLGEP 154
+L + ++Y G+ + A+ R+ +++ + + W + E +A ++ +
Sbjct: 613 SGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQK 672
Query: 155 SSSLRLS----NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
+L + K G++P TE VL DL++E KE+ Y SE+LA+A+GL++TP
Sbjct: 673 DEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTA 732
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
LRI KNLR+C +CH+ IK +S + REIIVRD T
Sbjct: 733 LRIMKNLRVCNDCHSAIKFISKLVGREIIVRDAT 766
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K GY+P T +V+ DLDQE KE+ + SE+LA+AYGLISTPP +R+ KNLR+
Sbjct: 720 LTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRV 779
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH K +S I REII RD
Sbjct: 780 CTDCHTATKFISKITGREIIARD 802
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 50 LEAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
LEA ++FE ++ +RPN +TFV V++AC V+EG + F S+ +DY I PT +H+
Sbjct: 531 LEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYAC 590
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD 166
+VD+ R + EA + I M S+ +W L + + +GE ++ L + ++
Sbjct: 591 MVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQN 650
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AG T L + A + +L G + PGR+ + + GE H+F
Sbjct: 651 AG----TYVSLSFIYAAAGMWRDVAKLRKLMKERG-VKKEPGRSW-----IEVAGEVHSF 700
Query: 227 I 227
+
Sbjct: 701 V 701
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 131/288 (45%), Gaps = 51/288 (17%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF----EN 58
N+ L L + + A+ + +K+ GI D I +L+ C L + N
Sbjct: 1278 NAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPN 1337
Query: 59 D-GVRPNWSTFVGVITACGCFGAVDEGFQHFESV--TRDYDINPTLEHFLGIVDLYGRLQ 115
D G+ P + ++ A G G V E + E++ IN L LG + G ++
Sbjct: 1338 DYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRAL---LGACRIQGDVE 1394
Query: 116 --KIAEAREF----------IRNMQIDASSVVWETL--------EKYAQTEPGLLLGEPS 155
K AR F + I A++ W+ + K + +PG +
Sbjct: 1395 TGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVK 1454
Query: 156 SSLRL------SNKKKDA---------------GYMPYTEYVLRDLDQEAKEKPQTYRSE 194
+ L L S+ + D GY+P TE+VL D++ E KE+ Y SE
Sbjct: 1455 NMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSE 1514
Query: 195 RLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+LA+AYGLISTP T+R+ KNLR+CG+CHN IK +S + REI++RD
Sbjct: 1515 KLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRD 1562
>gi|358357226|gb|AEU08453.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 61/84 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L++ K+ GY+P T ++L D+DQ+ KE+ + SE+LA+ +GLISTPPG +RI KNLR
Sbjct: 58 KLTSHMKEEGYIPDTRFILHDVDQQTKEQALCHHSEKLAICFGLISTPPGTPIRIVKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
ICG+CH K +S I REII RD
Sbjct: 118 ICGDCHTASKFISKIVAREIIARD 141
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 123/272 (45%), Gaps = 45/272 (16%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
+ AL++ + GI + ++ LL C L+E G RF E+ VR + +
Sbjct: 1020 RKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTC 1079
Query: 71 VITACGCFGAVDEGFQHFESVTRDYD-----------------------INPTLE----- 102
V+ G G +DE + S+T + D LE
Sbjct: 1080 VVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQN 1139
Query: 103 --HFLGIVDLY---GRLQKIAEAREFIRNMQIDA-SSVVW-ETLEKYAQTEPGLLLGEPS 155
H++ + ++Y GR + +A+ R+ + ++ W E K Q G S
Sbjct: 1140 PGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRS 1199
Query: 156 SSL-----RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
+ L NK + GY+P T +VL D+D+E K SE+LA+A+GLI+TP
Sbjct: 1200 KEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTP 1259
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KNLR+CG+CH F K +S+I R IIVRD
Sbjct: 1260 IRIIKNLRVCGDCHTFCKLVSAITGRVIIVRD 1291
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 108/248 (43%), Gaps = 45/248 (18%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
+ AL++ + + G+ D + LL C L+E G RF E+ VR + +
Sbjct: 344 RKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTC 403
Query: 71 VITACGCFGAVDEGFQHFESVTRDYD-----------------------INPTLE----- 102
V+ G G +DE + +S+T + D LE
Sbjct: 404 VVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQN 463
Query: 103 --HFLGIVDLY---GRLQKIAEAREFIRNMQIDAS-SVVW-ETLEKYAQTEPGLLLGEPS 155
H++ + ++Y GR + +A+ R+ + ++ + W E K Q G S
Sbjct: 464 PGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRS 523
Query: 156 SSL-----RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
+ LSNK + GY+P T +VL D+D+E K SE+LA+A+GLI+TP
Sbjct: 524 KEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTP 583
Query: 211 LRIKKNLR 218
+RI KNLR
Sbjct: 584 IRIIKNLR 591
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 76/155 (49%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
V++A E+ D+++ + S I K L+ + G+ P+ T ++ A
Sbjct: 312 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYA 371
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G V+EG + F S+ DY + ++H+ +VDL GR ++ EA + I++M I+
Sbjct: 372 CSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEG 431
Query: 135 VWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
+W +T ++L E +++ L + ++ G+
Sbjct: 432 LWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGH 466
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 72/155 (46%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
V++A E+ D+++ + S I K L+ G+ PN T V ++ A
Sbjct: 988 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYA 1047
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G V+EG + F + DY + ++H+ +VDL GR ++ EA + I +M +
Sbjct: 1048 CSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEG 1107
Query: 135 VWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
+W +T + L E +++ L + ++ G+
Sbjct: 1108 LWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGH 1142
>gi|358357242|gb|AEU08461.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 62/86 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + KDAGY+P T +VL DL++E KE + SERLA+A+GLI TPPG +RI KNLR
Sbjct: 58 RLSEQLKDAGYVPDTRFVLLDLEEEQKEFSLCHHSERLAIAFGLICTPPGAPIRIIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+CG+CH K +S I R I++RD +
Sbjct: 118 VCGDCHIATKFISKIIGRGIVLRDAS 143
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 72/262 (27%), Positives = 108/262 (41%), Gaps = 77/262 (29%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYG----- 112
N PN TF+ + AC G VD G + F+ + RDY PT +VD+ G
Sbjct: 582 NGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRL 641
Query: 113 ---------------------------------RLQKIA----------EAREFIRNMQI 129
+L +IA EA ++ I
Sbjct: 642 DEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNI 701
Query: 130 DASSVVWET--------LEKYAQTEPG------------LLLGE---PSSSL------RL 160
+++ +WE ++ EPG + GE P S+ L
Sbjct: 702 YSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDAL 761
Query: 161 SNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRIC 220
+ + GY+P T VL D+D+ K Y SE+LA+A+GL+ PPG T+R+ KNLR+C
Sbjct: 762 WERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVC 821
Query: 221 GECHNFIKKLSSIENREIIVRD 242
+CH K +S + REI++RD
Sbjct: 822 NDCHEAAKFISRMVGREIVLRD 843
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 62/280 (22%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
A+EV ++K G+ +S + +L+ C L++ G+ + GV P V ++
Sbjct: 294 AMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMV 353
Query: 73 TACGCFGAVDEGFQHFESVTRD-------------------YDI--------------NP 99
G G ++E +Q + + D +D+ NP
Sbjct: 354 DMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINAEPENP 413
Query: 100 TLEHFLGIVDLY---GRLQKIAEAREFI-----------RNMQIDASSVVWETLEK-YAQ 144
H++ + ++Y GR+ ++ R + + +D S ++ +K + +
Sbjct: 414 G--HYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKSHPE 471
Query: 145 T-EPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLI 203
T E L E L + KDAGY P E + +L+ E +E Y SE+LAVA+GL+
Sbjct: 472 TNEIYCFLDE------LIWRCKDAGYAPVPESAMHELEGEEREYALRYHSEKLAVAFGLM 525
Query: 204 STPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
T G TLRI KNLRIC +CH+ IK +S++ NREIIVRDK
Sbjct: 526 KTGDGVTLRIVKNLRICEDCHSAIKFISAVMNREIIVRDK 565
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
++ +E R + GV PN TFV V++AC G +DEG F S+ ++Y + P +EH +
Sbjct: 292 VEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVC 351
Query: 107 IVDLYGRLQKIAEAREFIRNMQID-ASSVVWETLEKYAQTEPGLLLG------------- 152
+VD++GR + EA +F++ + D VW + + LG
Sbjct: 352 MVDMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINAEPE 411
Query: 153 EPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
P + LSN AG M E V + Q +K Y +
Sbjct: 412 NPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYST 452
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 122/272 (44%), Gaps = 80/272 (29%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+A + FEN +P+ TF+G+++AC +++G ++F+S++ + + PTL+H+ +
Sbjct: 406 DALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACM 465
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTE--------------------- 146
V+L GR +I +A I+NM D ++W TL T+
Sbjct: 466 VNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIA 525
Query: 147 -PGLLLGEPSSS-------------LRLSNKKKDAGY------------------MPYTE 174
P ++L +S ++ N KK AG+ P +E
Sbjct: 526 VPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESE 585
Query: 175 YVLRDLD------QEAKEKPQT-----------------YRSERLAVAYGLISTPPGRT- 210
+ L+ QE P T + SE+LA+A+GLI P G +
Sbjct: 586 DIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISP 645
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KN+RIC +CH F+K S I R+II+RD
Sbjct: 646 IRIIKNIRICNDCHEFMKFASRIIGRQIILRD 677
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 111/266 (41%), Gaps = 77/266 (28%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
E+ + P+ TF+ ++ AC G ++EG + E++ Y + P EH+ +VDL GR
Sbjct: 506 MEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRAN 565
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE-------------PSSSLRLSN 162
+ EA F+++MQI+ ++ VW + LGE P S + +SN
Sbjct: 566 HLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISN 625
Query: 163 KKKDAGYMPYTE----------------------------YVLRD--------------- 179
+G E +++RD
Sbjct: 626 VFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQ 685
Query: 180 ----LDQEAKEKPQTY-----------------RSERLAVAYGLISTPPGRTLRIKKNLR 218
L++E PQT SERLA+AYGL+ST G +RI KNLR
Sbjct: 686 ITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLR 745
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+C +CH F K +S RE+IVRD +
Sbjct: 746 VCVDCHTFCKLVSKFFERELIVRDAS 771
>gi|302141726|emb|CBI18929.3| unnamed protein product [Vitis vinifera]
Length = 387
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 16/207 (7%)
Query: 44 CMDLKLLEAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESV-TRDYDINP 99
C+D EA + F + GV+PN ++ G+I G E F + R ++N
Sbjct: 171 CVD----EAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGMELN- 225
Query: 100 TLEHFLGIVDLYGRLQKIAEAREFIRNMQIDA---SSVVWETLEKYAQTEPGLLLGEPSS 156
+ + ++ + + EA E R MQI +SV L ++ P + +
Sbjct: 226 -VVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPAYKSHPQM--TQIIE 282
Query: 157 SL-RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKK 215
L +LS + K GY P +VL+D++++ KE+ SE+LAV +GL++TPPG L++ K
Sbjct: 283 KLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIK 342
Query: 216 NLRICGECHNFIKKLSSIENREIIVRD 242
NLRICG+CH IK +SS E REI VRD
Sbjct: 343 NLRICGDCHVVIKFISSFERREIFVRD 369
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 117/259 (45%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++P+ FV ++TA G V++G+ F S+ Y I P H+ +VDL GR ++E
Sbjct: 569 GIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSE 628
Query: 120 AREFIRNMQIDASSVVWETL-----------------EKYAQTEP-----GLLLGEPSSS 157
A I +MQ++ + V+W +L E+ ++ +P +LL +S
Sbjct: 629 ALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYAS 688
Query: 158 ---------LRLSNKKKDAGYMPYTEYV-------------------------------- 176
+RL K+K A MP + +
Sbjct: 689 AGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCR 748
Query: 177 LRDL-------------DQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
LRD+ +++ KE + SE+LA+A+ LIST G +R+ KNLRIC +C
Sbjct: 749 LRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDC 808
Query: 224 HNFIKKLSSIENREIIVRD 242
H+F K +S +REIIVRD
Sbjct: 809 HSFAKLVSKSYSREIIVRD 827
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 24/199 (12%)
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLY---GRLQKIA 118
+P+ T+ +++AC G + G + + + P+ ++ + ++Y G+ ++++
Sbjct: 403 KPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPST--YVLLSNVYAGAGKWEQMS 460
Query: 119 EAREFIRNMQID----ASSVVWETLEKYAQTEPGLLLGEPSSSLR---------LSNKKK 165
R+ + +M++ SS+ L K +Q GE ++ L + +
Sbjct: 461 RVRKLMTDMEVKRKPGYSSI---DLGKESQVFHA---GETCHPMKDEIFGLLKELDAEMR 514
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
GY+P T YVL D++++ KE+ + SER AVAYGL+ PG +RI KNLRICG+CH
Sbjct: 515 KRGYIPDTSYVLHDMEEQEKERELFWHSERWAVAYGLLKAVPGTVIRIVKNLRICGDCHT 574
Query: 226 FIKKLSSIENREIIVRDKT 244
F+K SSI ++EIIVRD T
Sbjct: 575 FLKLTSSIVHKEIIVRDAT 593
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 14/142 (9%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
++PN TFVG+I AC G V +G + F+++ DY I+P+L+ F +DL R + EA
Sbjct: 334 IKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEA 393
Query: 121 REFIRNMQIDASSVVWETL----EKYAQTEPG---------LLLGEPSSSLRLSNKKKDA 167
+ I+ M W L + + TE G L + EPS+ + LSN A
Sbjct: 394 EDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGA 453
Query: 168 GYMPYTEYVLRDL-DQEAKEKP 188
G V + + D E K KP
Sbjct: 454 GKWEQMSRVRKLMTDMEVKRKP 475
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 144 QTEPGLLLGEPSSSLR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGL 202
QT P E S LR L+ K K GY+P +VL+D++ + KE T SERLA+A+G+
Sbjct: 701 QTHPKC--EEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGI 758
Query: 203 ISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
ISTPP TL+I KNLR+CG+CHN K +S I REIIVRD
Sbjct: 759 ISTPPKTTLQIFKNLRVCGDCHNATKFISKITEREIIVRD 798
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
LK ++ K +++GV+P+ TFV +++AC G VDEG F+ + Y I P+L+H+
Sbjct: 527 LKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGC 586
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD 166
+VDL+GR + +A F++NM + VW L + + L S L + ++
Sbjct: 587 MVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESEN 646
Query: 167 AGYMPYTEYVLRDLDQ-EAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
GY + L E ++ ++ +R GL TP ++ + K + +
Sbjct: 647 VGYYVLLSNIYAKLGHWEGVDEVRSLARDR-----GLKKTPGWSSIEVDKKIDV 695
>gi|190612947|gb|ACE80851.1| pentatricopeptide repeat protein [Lepidogyna hodgsoniae]
Length = 152
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 58/80 (72%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K+AGY+P T +VL D+D+ KE + SE+LA+A GLISTPPG LRI KNLR+CG+CH
Sbjct: 64 KEAGYIPDTSFVLHDVDEGTKEFWLCHHSEKLAIALGLISTPPGTPLRIFKNLRVCGDCH 123
Query: 225 NFIKKLSSIENREIIVRDKT 244
K +S I REIIVRD +
Sbjct: 124 TATKFMSKIVGREIIVRDAS 143
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 109/208 (52%), Gaps = 18/208 (8%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+L EA K E ++P + + ++ +C +D G E + + D + + H L +
Sbjct: 458 RLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIF-ELDPHDSGPHVL-L 515
Query: 108 VDLY---GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSLR---- 159
++Y GRL A+ R+ ++ + + W +E + + S +R
Sbjct: 516 SNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHV---FVANDDSHPMREEIQ 572
Query: 160 -----LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIK 214
+S K K+ GY+P T +VL ++Q+ +E Y SE+LA+A+ ++ TPPG T+RIK
Sbjct: 573 RMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIK 632
Query: 215 KNLRICGECHNFIKKLSSIENREIIVRD 242
KN+RICG+CH+ K S + REIIVRD
Sbjct: 633 KNIRICGDCHSAFKFASRVLGREIIVRD 660
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+PN TF+ V+TAC G +DEG +FE + + + I + H + +VDL GR ++ EA
Sbjct: 404 VQPNEITFLSVLTACSHSGLLDEGQYYFE-LMKKHKIEAQVAHHVTVVDLLGRAGRLNEA 462
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLG 152
+FI M I ++ VW L + + LG
Sbjct: 463 NKFIEEMPIKPTAAVWGALLGSCRMHKNMDLG 494
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 124/271 (45%), Gaps = 47/271 (17%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
A+ + +++ GI + + +L+ C L+ G+ + +N G+ P+ S + +I
Sbjct: 227 AVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMI 286
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQID-- 130
G G +DE + + D++ LG ++G + E + M++
Sbjct: 287 DLLGRAGCLDEAENFINGMPVEPDVS-VWGALLGACRIHGNTELAKRIAEHLLGMEVQIA 345
Query: 131 ----------ASSVVWETLEKY--------AQTEPG------------LLLGEPSSSL-- 158
A++ W+ K +PG + GE S
Sbjct: 346 GIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLK 405
Query: 159 -------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
LS K K AGY+P +VL+D++ + KE ++ SE+LA+A+G+I+T PG T+
Sbjct: 406 EIHEFLESLSRKMKAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTI 465
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRD 242
R+ KNLR+CG+CH IK +S R+I+VRD
Sbjct: 466 RVAKNLRVCGDCHTVIKFISLNFTRKIVVRD 496
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 57/78 (73%)
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AGY+P E+ L D+ +E KE+ + SE+LA+AYGLI PPG +R+ KNLR+CG+CH
Sbjct: 476 AGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPGTPIRVFKNLRVCGDCHRA 535
Query: 227 IKKLSSIENREIIVRDKT 244
IK +S IE REIIVRD T
Sbjct: 536 IKYISQIERREIIVRDTT 553
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++P+W TFV V+ AC G D G ++F S+ +DY + +H+ +VDL GR K+ E
Sbjct: 293 GMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVE 352
Query: 120 AREFIRNMQIDASSVVWETL 139
A + I M + V+ TL
Sbjct: 353 AVDLIEKMPFKPHAAVFGTL 372
>gi|302781368|ref|XP_002972458.1| hypothetical protein SELMODRAFT_97859 [Selaginella moellendorffii]
gi|300159925|gb|EFJ26544.1| hypothetical protein SELMODRAFT_97859 [Selaginella moellendorffii]
Length = 381
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 120/265 (45%), Gaps = 77/265 (29%)
Query: 54 KRFENDGVRPNWSTFVGVITACG----------CFGAV-DEGF----QHF---------- 88
+R E +G++PN TF+ ++ AC CF A+ D GF +HF
Sbjct: 100 RRMELEGIKPNNVTFLSLVYACSHSGYLDEARDCFIAMADHGFFPLPEHFRCVIDLLGRG 159
Query: 89 ------ESVTRDYDINPTLEHFLGIVDLYGRLQK------IAEAR----------EFIRN 126
+ V P L +L ++ RLQK IA + ++
Sbjct: 160 GRLEEAQEVIDAMPFEPGLTAWLTMLSAC-RLQKDVLRAEIAAEKCYEIEPTRPSAYLLM 218
Query: 127 MQIDASSVVWETLEKY--------AQTEPGLLLGEPSSSL-------------------- 158
+ A+ W+ +EK + EPGL E + L
Sbjct: 219 SNLYAALERWDDVEKVRRLMERRGVKKEPGLSCIEVKNRLHEFGAADKSHPQKDLIYEEL 278
Query: 159 -RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
+L+ + K+AGY+P T VL ++D+E K+ + SERLAV YGLI+TPPG +L + NL
Sbjct: 279 RKLTLEIKEAGYVPDTSLVLHNVDEETKQATLFHHSERLAVVYGLINTPPGTSLCVVNNL 338
Query: 218 RICGECHNFIKKLSSIENREIIVRD 242
R+C +CH K +S+I NR+I+VRD
Sbjct: 339 RMCSDCHTAFKYISTISNRQIVVRD 363
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 63/86 (73%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L+ + K GY+P ++VL D+D+ K + SE+LA+++GLIST PG TLRI KNLR
Sbjct: 512 QLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLR 571
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+CG+CHN K +S IE+REII+RD T
Sbjct: 572 VCGDCHNAAKVISKIEDREIILRDTT 597
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 4/161 (2%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+R +++GV PNW TFV V+TAC G D G + FE + Y I P ++H+ +VDL R
Sbjct: 331 ERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCR 390
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYT 173
K+ A + IR+M + + TL + L E ++ + + AG Y
Sbjct: 391 AGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAG--AYV 448
Query: 174 EYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIK 214
+ L ++ A + R R ++ TP + IK
Sbjct: 449 Q--LANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIK 487
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 64/88 (72%)
Query: 155 SSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIK 214
S +L + + GY+P TE+V DL++E KE+ +Y SERLA+A+GL++T PG L I
Sbjct: 576 SKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVII 635
Query: 215 KNLRICGECHNFIKKLSSIENREIIVRD 242
KNLR+CG+CH+ IK +S I +REI+VRD
Sbjct: 636 KNLRVCGDCHDAIKYISKIADREIVVRD 663
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+RP+ +TF +++A G V+EG F + + I P +H++ +VDL R + E
Sbjct: 405 GMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEE 464
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRD 179
A + + +M+ + + +W L L LGE + L + D G + ++ +
Sbjct: 465 ASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLA----LVSN 520
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREII 239
L K+ + + +L G P ++ I+ G H F+ + S RE I
Sbjct: 521 LYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIR------GTRHVFVMEDQSHPQREEI 574
Query: 240 V 240
V
Sbjct: 575 V 575
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 121/277 (43%), Gaps = 81/277 (29%)
Query: 45 MDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFES-------------- 90
M L+L E + G+RP++ T + +++ C GAV+ G Q FES
Sbjct: 394 MALRLFEE-MTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHF 452
Query: 91 ------------VTRDYD------INPTLE---HFLGIVDLYGR--LQKIAEAREF---- 123
V R Y+ I PT+ LG ++G+ L KIA + F
Sbjct: 453 ACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDH 512
Query: 124 --------IRNMQIDASSVVWE--TLEKYAQTEPGLLLGEPSSSLRLSNK---------- 163
+ NM AS+ WE T+ + + G+ S + + N+
Sbjct: 513 VDSGNHVVLSNML--ASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSS 570
Query: 164 -----------------KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTP 206
K+AGY+P T L DL+ E K Y SE++A+A+GLI+ P
Sbjct: 571 HDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALP 630
Query: 207 PGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
G +RI KNLRICG+CH+ IK +S I REIIVRD
Sbjct: 631 QGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDN 667
>gi|302805077|ref|XP_002984290.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
gi|300148139|gb|EFJ14800.1| hypothetical protein SELMODRAFT_119978 [Selaginella moellendorffii]
Length = 448
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 118/275 (42%), Gaps = 97/275 (35%)
Query: 54 KRFENDGVRPNWSTFVGVITACG----------CFGAV-DEGF----QHFESVT------ 92
+R E +G++PN TF+ ++ AC CF A+ D GF +HF V
Sbjct: 167 RRMELEGIKPNNVTFLSLVFACSHSGYLDEARDCFIAMADHGFFPLPEHFRCVIDLLGRG 226
Query: 93 -------------------------------------------RDYDINPTL-EHFLGIV 108
+ Y+I PT +L +
Sbjct: 227 GRLEEAQEVIDTMPFEPGLTAWLTMLSACRLQKDVLRAEIAAEKCYEIEPTRPSAYLLMS 286
Query: 109 DLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL---------- 158
+LY L++ + ++ R M+ + + EPGL E + L
Sbjct: 287 NLYAALERWDDVKKVRRLME-----------RRGVKKEPGLSCIEVKNRLHEFGAANKSH 335
Query: 159 -----------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPP 207
+L+ + K+AGY+P T VL ++D+E K+ + SERLAV YGLI+TPP
Sbjct: 336 PQKDLIYEELRKLTLEIKEAGYVPDTSLVLHNVDEETKQATLFHHSERLAVVYGLINTPP 395
Query: 208 GRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
G +L + NLR+C +CH K +S+I NREI+VRD
Sbjct: 396 GTSLCVVNNLRMCSDCHTAFKYISTISNREIVVRD 430
>gi|296085625|emb|CBI29414.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 126/287 (43%), Gaps = 60/287 (20%)
Query: 11 REREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVG 70
R +++A +V DK G+ + II + L R ++GVRP+ ST+
Sbjct: 51 RLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTV 110
Query: 71 VITACG-----------CFGAVDEGFQH----FESVTRDYDINPTLEHFLGIVDLYGR-- 113
V+ AC AVD+G+ +V Y ++ + + D GR
Sbjct: 111 VLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRD 170
Query: 114 ----------LQKIAEAREFI---RNMQ---IDASSVVWETLEKYAQTEPGLLLGEPSSS 157
L + +ARE + R M ++ VV L + T LG
Sbjct: 171 LVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTT-----LGHSKMG 225
Query: 158 L----------------------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSER 195
L +L + K GY+P TE+VL +L++E KE+ SER
Sbjct: 226 LSIHGYMIRKDIIMDVIIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSER 285
Query: 196 LAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
LA+A+GL++T PG L I KNLR+CG+CH K +S I NREI+VRD
Sbjct: 286 LAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRD 332
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 119/271 (43%), Gaps = 79/271 (29%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF--- 104
EA K FE N G+ P+ TF +++AC G V+EG +F ++ Y I P ++H+
Sbjct: 322 EAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCM 381
Query: 105 --------------------------------LGIVDLYGRLQKIAEAREFIRNMQ---- 128
LG ++G ++ E E + NM+
Sbjct: 382 VDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDP 441
Query: 129 --------IDASSVVWETLEK---------------YAQTEPG-----LLLGEPS----- 155
+ ++S W+ K Y+ E G +G+ S
Sbjct: 442 RNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETE 501
Query: 156 ---SSLR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
S L L K + AGY TEYVL+D+++E KE SE+LA+A+GL+ + G L
Sbjct: 502 KIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEAL 561
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRD 242
I KNLRICG+CH+ K +S IE R II+RD
Sbjct: 562 IITKNLRICGDCHSTAKLISLIEKRTIIIRD 592
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 123/270 (45%), Gaps = 79/270 (29%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF----- 104
LE + + +RPN TF+ VI+AC G V+ G + F + +Y I P+++H+
Sbjct: 524 LELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVD 583
Query: 105 -LG-------------------IVDLYGRL-------------QKIAEAREFIRN----- 126
LG V++YG + +K+AE R F N
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAE-RLFELNPEDGG 642
Query: 127 -----MQIDASSVVWE--------TLEKYAQTEPGLLLGE---------PSSSLRLSNKK 164
I ++ +WE L + + PG + E S+ S+KK
Sbjct: 643 YHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKK 702
Query: 165 ------------KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
K+AGY+P T +L L+ + KE+ + SE+LA+++GL++T G T+
Sbjct: 703 IYAFLEKLICQIKEAGYVPDTNLIL-GLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIH 761
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRD 242
++KNLR+C +CHN K +S + REIIVRD
Sbjct: 762 VRKNLRVCADCHNATKYISLVTGREIIVRD 791
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 119/271 (43%), Gaps = 79/271 (29%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF--- 104
EA K FE N G+ P+ TF +++AC G V+EG +F ++ Y I P ++H+
Sbjct: 322 EAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCM 381
Query: 105 --------------------------------LGIVDLYGRLQKIAEAREFIRNMQ---- 128
LG ++G ++ E E + NM+
Sbjct: 382 VDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDP 441
Query: 129 --------IDASSVVWETLEK---------------YAQTEPG-----LLLGEPS----- 155
+ ++S W+ K Y+ E G +G+ S
Sbjct: 442 RNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETE 501
Query: 156 ---SSLR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
S L L K + AGY TEYVL+D+++E KE SE+LA+A+GL+ + G L
Sbjct: 502 KIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEAL 561
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRD 242
I KNLRICG+CH+ K +S IE R II+RD
Sbjct: 562 IITKNLRICGDCHSTAKLISLIEKRTIIIRD 592
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 63/84 (75%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L + + GY+P TE+V DL++E KE+ +Y SE+LA+A+GL++T PG L I KNLR
Sbjct: 580 KLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLR 639
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH+ IK +S I +REI+VRD
Sbjct: 640 VCGDCHDAIKYISKIADREIVVRD 663
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+RP+ +TF +++A G V+EG F + + I P +H++ +VDL R + E
Sbjct: 405 GMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEE 464
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRD 179
A + + +M+ + + +W L L LGE + L + D G + ++ +
Sbjct: 465 ASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLA----LVSN 520
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREII 239
L K+ + + +L G P ++ I+ G H F+ + S RE I
Sbjct: 521 LYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIR------GTRHAFLMEDQSHPQREEI 574
Query: 240 V 240
V
Sbjct: 575 V 575
>gi|190612663|gb|ACE80709.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + ++AGY+P T +V D+++E K + SE+LA+AYGLISTPPG LR+ KNLR
Sbjct: 58 RLYGQMEEAGYVPDTHFVFHDVEEEEKIVQLCHHSEKLAIAYGLISTPPGTPLRVFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+CG+CH IK ++ I REI VRD T
Sbjct: 118 VCGDCHTAIKLIAQIVEREITVRDAT 143
>gi|190612899|gb|ACE80827.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + ++AGY+P T +V D+++E K + SE+LA+AYGLISTPPG LR+ KNLR
Sbjct: 58 RLYGQMEEAGYVPDTHFVFHDVEEEEKIVQLCHHSEKLAIAYGLISTPPGTPLRVFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+CG+CH IK ++ I REI VRD T
Sbjct: 118 VCGDCHTAIKLIAQIVEREITVRDAT 143
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G P+ TF+ V+ AC G V EG + F ++ Y I P +EH+ +VD+ GR ++ +
Sbjct: 507 GYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEK 566
Query: 120 AREFIRNMQIDASSVVWETL-----------------EKYAQTEPG-----LLLGE---- 153
A EFI+ M ++ VW TL E+ + +PG +LL
Sbjct: 567 ALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSV 626
Query: 154 -----PSSSLRLSNKKKDAGYMPYTEYV-------------------------------- 176
++S+R KK+ P +
Sbjct: 627 ERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGK 686
Query: 177 LRDLDQEAKEKPQTY-------------RSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
+R++ +A+ P + SE+LA+A+GLI+T PG +RI KNLR+C +C
Sbjct: 687 MREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDC 746
Query: 224 HNFIKKLSSIENREIIVRD 242
H K +S I R I+VRD
Sbjct: 747 HTATKFISKITERVIVVRD 765
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 59/293 (20%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGV- 61
NS + L + A+E+ D++ G+F D + +L C L+E G+ + N +
Sbjct: 495 NSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLE 554
Query: 62 ------------------------------------RPNWSTFVGVITACGCFGAVDEGF 85
+P + ++ C G +D G
Sbjct: 555 SYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGI 614
Query: 86 QHFESVTRDYDINPTLEHFLGIVDLY---GRLQKIAEAREFIRNMQI-DASSVVWETLEK 141
+ E + + N ++ + ++Y GR +A+ R+ +R+ + + W +E
Sbjct: 615 EAAEQLFKLMPQNDGT--YVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVEN 672
Query: 142 YAQT-------EPGLLLGEPSSSLR----LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQT 190
P +L S R L + K GY+P T++VL D++ E KE +
Sbjct: 673 KVHVFMVDDDVHPEVL-----SVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALS 727
Query: 191 YRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
SE+LAV +G++ PP T+R+ KN+RICG+CHN K +S + REIIVRD+
Sbjct: 728 THSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDR 780
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 2 LNSELKHLCREREVK---------AALEVMDKLKNIGIFLDSPDIIELLNVCMDL----- 47
L+++L HL E + A V++ +++ + + S D++ ++ L
Sbjct: 447 LHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGH 506
Query: 48 --KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFL 105
K +E + +GV P+ TF+ V+TAC G V++G +F S+ Y I P +H+
Sbjct: 507 GVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYA 566
Query: 106 GIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLG 152
+VDL+ R + AR I +M + VWE L + + LG
Sbjct: 567 RMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLG 613
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 16/194 (8%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFLGIVDLY---GRLQK 116
++P+ S + ++ AC G ++ G F S R ++++ + +++ + ++Y G+ +
Sbjct: 451 LQPDASIWGALLGACRIHGNIELG--KFAS-DRLFEVDSKNVGYYVLLSNIYANVGKWEG 507
Query: 117 IAEAREFIRNMQIDASSVVWETLEK-------YAQTEPGLLLGEPSSSLR-LSNKKKDAG 168
+ + R R + + W T+E Y + E LR L+ K K G
Sbjct: 508 VDKVRSLARERGLKKTPG-WSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLG 566
Query: 169 YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIK 228
Y+P +VL+D++++ KE T SERLA+A+G+ISTPP +RI KNLR+CG+CHN K
Sbjct: 567 YIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATK 626
Query: 229 KLSSIENREIIVRD 242
+S I REI+VRD
Sbjct: 627 FISRITQREIVVRD 640
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
++GV+P+ TFV +++AC G V+EG F + ++Y I P+L+H+ +VDL GR +
Sbjct: 381 DEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR-LMQEYGIKPSLKHYGCMVDLLGRAGYL 439
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVL 177
A +FI++M + + +W L + + LG+ +S K+ GY +
Sbjct: 440 EMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIY 499
Query: 178 RDLDQ-EAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ + E +K ++ ER GL TP T+ + + + +
Sbjct: 500 ANVGKWEGVDKVRSLARER-----GLKKTPGWSTIEVNRKVDV 537
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 123/276 (44%), Gaps = 53/276 (19%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVG 70
+ A+E+ ++N G DS I LL C L+ G + G++P +
Sbjct: 686 RKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYAC 745
Query: 71 VITACGCFGAVDEGFQHFESVT------------------RDYDINPTL----------- 101
V+ G G ++E + + RD DI +
Sbjct: 746 VVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDK 805
Query: 102 -EHFLGIVDLYGRLQKIAEAREFIRNM-----QIDASSVVWETLEKYAQTEPGLLLGEPS 155
E+++ I + Y RL K E R+ + M Q DA E K ++ L+G+ S
Sbjct: 806 AENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSR----FLVGDES 861
Query: 156 ---------SSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTP 206
+ + L K GY P T VL +L+++ K K SE+LA+++GL++T
Sbjct: 862 LLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLLNTA 921
Query: 207 PGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
G TLR+ KNLRIC +CHN IK +S I+ REIIVRD
Sbjct: 922 KGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRD 957
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 61/85 (71%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K AGY+ T+ VL D+++E KE Y SE+LAVAYG+++ PPGR +R+ KNLR+
Sbjct: 530 LDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRV 589
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CHN K +S+IE R I++RD
Sbjct: 590 CGDCHNAFKYISAIEGRLILLRDSN 614
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+P+ T VGV+ AC G V++G +F S+ D+ + EH+ ++DL GR ++AEA
Sbjct: 355 TKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEA 414
Query: 121 REFIRNMQIDASSVVWETL 139
+ +++M + S +W L
Sbjct: 415 HDLMKDMPFEPDSTMWGAL 433
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 59/84 (70%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+S K K+AGY+P T VL ++D+E KE Y SE+LA+A+GLIST PG +R+ KNLRI
Sbjct: 605 MSKKLKEAGYLPDTSVVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRI 664
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
C +CH K LS I R IIVRD+
Sbjct: 665 CDDCHTVTKLLSKIYKRVIIVRDR 688
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L+ E GV+PN TF+G + AC G V EG FE + D+ + P +EH+ +
Sbjct: 417 KALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCM 476
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VDL GR + EA + I +M + + +W + + +GE ++ L+ + ++
Sbjct: 477 VDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNC 536
Query: 168 GY 169
GY
Sbjct: 537 GY 538
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNV-CMDLKLLEAGKRFENDGVRPNWSTFVGVI 72
E+++A + D +KN + + I C+D + + ++GVRPN T V ++
Sbjct: 282 EIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAF-QLFVQMRDNGVRPNELTMVSLL 340
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDAS 132
+ C GA+D G + F + + + ++D+Y + I+ A+ ID
Sbjct: 341 SLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSE-AIDRD 398
Query: 133 SVVWETL 139
W +
Sbjct: 399 ICTWNVM 405
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 63/86 (73%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L+ + K GY+P ++VL D+D+ K + SE+LA+++GLIST PG TLRI KNLR
Sbjct: 561 QLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLR 620
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+CG+CHN K +S IE+REII+RD T
Sbjct: 621 VCGDCHNAAKVISKIEDREIILRDTT 646
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+R +++GV PNW TFV V+TAC G D G + FE + Y I P ++H+ +VDL R
Sbjct: 380 ERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCR 439
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYT 173
K+ A + IR+M + + TL + L E ++ + + AG
Sbjct: 440 AGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAG----- 494
Query: 174 EYV-LRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIK 214
YV L ++ A + R R ++ TP + IK
Sbjct: 495 AYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIK 536
>gi|190612949|gb|ACE80852.1| pentatricopeptide repeat protein [Lepidogyna hodgsoniae]
Length = 152
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 61/84 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + D GY+P ++VL ++ +E K + SE LA+A+GLISTPPG TLRI KNLR
Sbjct: 58 RLSEQMTDVGYVPDAQFVLHNVGEEEKASRLSLHSEMLAIAFGLISTPPGTTLRIFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH+ IK ++ I +R IIVRD
Sbjct: 118 VCGDCHSAIKFIAKIVDRSIIVRD 141
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + + AGY P T+YVL +LD+E +E SERLA+AYGL+ TPPG +RI KNLR
Sbjct: 1060 RLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLR 1119
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
ICG+CH K +S + REII RD
Sbjct: 1120 ICGDCHTASKFISKLVGREIIARD 1143
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 5/155 (3%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
+ +G++P+ STF +++AC G V EG + F S+ + ++PT+EH+ +V L GR
Sbjct: 881 MDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAG 940
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEY 175
+ EA I M + VWETL + + L E +++ L ++ P
Sbjct: 941 RFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARN----PAVYV 996
Query: 176 VLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
+L ++ A + R+ G I PGR+
Sbjct: 997 LLSNVYAAAGRWDDVAKIRRVMEGRG-IRKEPGRS 1030
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 5/129 (3%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGC 77
A +V DK+ N I + I + L+ + + GV N +FV ++ AC
Sbjct: 742 ARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSS 801
Query: 78 FGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVW 136
F A++EG + H E V R + + ++ +Y + + EA+E N + + V W
Sbjct: 802 FSALEEGKRVHAEIVKR--KMQGDVRVGAALISMYAKCGSLEEAQEVFDNF-TEKNVVTW 858
Query: 137 ETL-EKYAQ 144
+ YAQ
Sbjct: 859 NAMINAYAQ 867
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 61/83 (73%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K G++P TE+VL D+++E KE Y SE+LAVA+GLI++PP +R+ KNLR+
Sbjct: 588 LGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRV 647
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ IK +S I REII+RD
Sbjct: 648 CGDCHDAIKLISKITKREIIIRD 670
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
E G+RP+ +TF+G++ C G V+EG Q F ++ R + + P++EH+ +VDL GR
Sbjct: 409 EKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGL 468
Query: 117 IAEAREFIRNMQIDASSVVWETL 139
+ EA + I NM + ++VVW L
Sbjct: 469 LNEAHQLINNMPMKPNAVVWGAL 491
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHFLGIVDLYGR 113
+ +++ ++P+ T VGV++AC GA+D G + R+ + NP L ++D+Y +
Sbjct: 306 QMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSK 363
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
+ +A E M+ VVW +
Sbjct: 364 CGSVTQAWEIFTAMK-KKDRVVWNAM 388
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 61/83 (73%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K G++P TE+VL D+++E KE Y SE+LAVA+GLI++PP +R+ KNLR+
Sbjct: 588 LGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRV 647
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ IK +S I REII+RD
Sbjct: 648 CGDCHDAIKLISKITKREIIIRD 670
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
E G+RP+ +TF+G++ C G V+EG Q F ++ R + + P++EH+ +VDL GR
Sbjct: 409 EKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGL 468
Query: 117 IAEAREFIRNMQIDASSVVWETL 139
+ EA + I NM + ++VVW L
Sbjct: 469 LNEAHQLINNMPMKPNAVVWGAL 491
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHFLGIVDLYGR 113
+ +++ ++P+ T VGV++AC GA+D G + R+ + NP L ++D+Y +
Sbjct: 306 QMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSK 363
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
+ +A E M+ VVW +
Sbjct: 364 CGSVTQAWEIFTAMK-RKDRVVWNAM 388
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 60/85 (70%)
Query: 158 LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
++L + + AGYMP T Y L DL++E K Y SE++A+A+GLI+ PPG +RI KNL
Sbjct: 529 VKLRTEMQAAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNL 588
Query: 218 RICGECHNFIKKLSSIENREIIVRD 242
RICG+CH+ K +S I REIIVRD
Sbjct: 589 RICGDCHSAFKFISGIVGREIIVRD 613
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%)
Query: 64 NWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREF 123
N+ T + V++AC GAV G + FES+ Y I P EH+ I D+ GR + A EF
Sbjct: 359 NYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEF 418
Query: 124 IRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
++ M I + VW L + LG+ ++ KD+G
Sbjct: 419 VQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSG 463
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 17/207 (8%)
Query: 50 LEAGKRFEND-GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFLGI 107
LE F D ++P+ S + ++ AC G ++ G F S R ++++ + +++ +
Sbjct: 672 LEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELG--KFAS-DRLFEVDSKNVGYYVLL 728
Query: 108 VDLY---GRLQKIAEAREFIRNMQIDASSVVWETLEK-------YAQTEPGLLLGEPSSS 157
++Y G+ + + + R R + + W T+E Y + E
Sbjct: 729 SNIYANVGKWEGVDKVRSLARERGLKKTPG-WSTIEVNRKVDVFYTGNQSHPKCKEIYEE 787
Query: 158 LR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKN 216
LR L+ K K GY+P +VL+D++++ KE T SERLA+A+G+ISTPP +RI KN
Sbjct: 788 LRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKN 847
Query: 217 LRICGECHNFIKKLSSIENREIIVRDK 243
LR+CG+CHN K +S I REI+VRD
Sbjct: 848 LRVCGDCHNATKFISRITQREIVVRDS 874
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
++GV+P+ TFV +++AC G V+EG F + ++Y I P+L+H+ +VDL GR +
Sbjct: 614 DEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR-LMQEYGIKPSLKHYGCMVDLLGRAGYL 672
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVL 177
A +FI++M + + +W L + + LG+ +S K+ GY +
Sbjct: 673 EMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIY 732
Query: 178 RDLDQ-EAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ + E +K ++ ER GL TP T+ + + + +
Sbjct: 733 ANVGKWEGVDKVRSLARER-----GLKKTPGWSTIEVNRKVDV 770
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 17/207 (8%)
Query: 50 LEAGKRFEND-GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFLGI 107
LE F D ++P+ S + ++ AC G ++ G F S R ++++ + +++ +
Sbjct: 672 LEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELG--KFAS-DRLFEVDSKNVGYYVLL 728
Query: 108 VDLY---GRLQKIAEAREFIRNMQIDASSVVWETLEK-------YAQTEPGLLLGEPSSS 157
++Y G+ + + + R R + + W T+E Y + E
Sbjct: 729 SNIYANVGKWEGVDKVRSLARERGLKKTPG-WSTIEVNRKVDVFYTGNQSHPKCKEIYEE 787
Query: 158 LR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKN 216
LR L+ K K GY+P +VL+D++++ KE T SERLA+A+G+ISTPP +RI KN
Sbjct: 788 LRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKN 847
Query: 217 LRICGECHNFIKKLSSIENREIIVRDK 243
LR+CG+CHN K +S I REI+VRD
Sbjct: 848 LRVCGDCHNATKFISRITQREIVVRDS 874
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
++GV+P+ TFV +++AC G V+EG F + ++Y I P+L+H+ +VDL GR +
Sbjct: 614 DEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR-LMQEYGIKPSLKHYGCMVDLLGRAGYL 672
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVL 177
A FI++M + + +W L + + LG+ +S K+ GY +
Sbjct: 673 EMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIY 732
Query: 178 RDLDQ-EAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ + E +K ++ ER GL TP T+ + + + +
Sbjct: 733 ANVGKWEGVDKVRSLARER-----GLKKTPGWSTIEVNRKVDV 770
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 64/84 (76%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
++S+K K+ GY+P + +VL +DQ+ +E Y SE+LA+A+ L++TPPG T+RIKKN+R
Sbjct: 489 QISDKIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIR 548
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
ICG+CH+ K +S + REIIVRD
Sbjct: 549 ICGDCHSAFKFVSKLVEREIIVRD 572
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 52 AGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIV 108
A +RFE + PN TF+ V+TAC G +DEG +H+ + + Y++ P + H++ +V
Sbjct: 304 ALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEG-RHYFDMMKKYNVEPQISHYVTMV 362
Query: 109 DLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLG 152
DL GR + A +FI M I ++ VW L + + LG
Sbjct: 363 DLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELG 406
>gi|302804238|ref|XP_002983871.1| hypothetical protein SELMODRAFT_119445 [Selaginella moellendorffii]
gi|300148223|gb|EFJ14883.1| hypothetical protein SELMODRAFT_119445 [Selaginella moellendorffii]
Length = 481
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 111/267 (41%), Gaps = 74/267 (27%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L +R +++G+ + + F +I +C E + F + DY I P EHF +VD
Sbjct: 196 LRLARRMQHEGMILDGNCFANLIFSCANGRQDAEACRFFMDMRSDYGIVPGKEHFGCLVD 255
Query: 110 -----------------------------------LYGRLQKIAEAREFIRNM--QIDA- 131
L+G Q+I + E + M Q+D
Sbjct: 256 AVGRAGHLKDAEDLIKAMPMQPDEHVWSVLFASAQLHGDAQRIQRSAEIMMKMNPQLDPL 315
Query: 132 ------SSVVWETLEKYAQ--------TEPG---LLLGEPSSSLRLSNK----------- 163
++ WE K + EPG + + S ++
Sbjct: 316 GTGANRTAARWEEARKVRELMRKRGIKKEPGKSMITINNVVHSFMARDRSHIHTKEIYAE 375
Query: 164 --------KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKK 215
KK+ Y+P T YVL D+ ++ K K Y SERLA+AYG I+TPPG LR+ K
Sbjct: 376 VDRITEICKKEENYIPDTRYVLHDVPEDQKPKLLYYHSERLAMAYGHIATPPGSALRVIK 435
Query: 216 NLRICGECHNFIKKLSSIENREIIVRD 242
NLR+CG+CH K + I REIIVRD
Sbjct: 436 NLRVCGDCHTISKMWAKIMQREIIVRD 462
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
KR E +GV+PN+ F+ V+TAC G VDE +++F S+T+DY I P LEH+ + DL GR
Sbjct: 427 KRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGR 486
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYT 173
+ ++ EA EFI +M I+ + VW TL + + L E S + ++ G
Sbjct: 487 VGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIG----- 541
Query: 174 EYVLRDLDQEAKEKPQTYRSERLAVA-YGLISTPPGRTLRIKKNLR 218
YVL A + + R R+A+ G+ P + IK +
Sbjct: 542 AYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVH 587
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+ T VL D+++E K SERLA+ +G+ISTP G T+R+ KNLR+C +CH
Sbjct: 617 GYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTAT 676
Query: 228 KKLSSIENREIIVRDKT 244
K +S I REI+VRD +
Sbjct: 677 KFISKIVGREIVVRDNS 693
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 127/285 (44%), Gaps = 45/285 (15%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + L VK + + +++ +GI D I LL C L++ G+R+ N R
Sbjct: 384 NAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYR 443
Query: 63 -----PNWSTFVGVITACGCFGAVDEGFQHFES------------------VTRDYDINP 99
P+ + ++ G G +DE Q + + RD +
Sbjct: 444 FFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAE 503
Query: 100 TLEHFLGIVDLYGRLQKIAEAREFIRNMQID-ASSVVWETLEKYAQTEPG---------- 148
L ++ + + + + N++ D A+ V EK Q PG
Sbjct: 504 LALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIV 563
Query: 149 --LLLGEPSSSL---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLA 197
L+G+ L L+ K K AGY+P T++VL D+++E KE SE+LA
Sbjct: 564 HEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLA 623
Query: 198 VAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+A+GLIS P +R+ KNLR+CG+CH IK +SSI REI VRD
Sbjct: 624 IAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRD 668
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHFLGIVDLYGR 113
+ + + V+P+ T VGV++AC GA++ G V R+ + NP L ++DLY +
Sbjct: 304 QMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLG--TALIDLYAK 361
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
++ A E + M+ + VVW +
Sbjct: 362 CGSMSRAWEVFKGMK-EKDRVVWNAI 386
>gi|190612683|gb|ACE80719.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 62/84 (73%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + + AGY+P T+ VL D+++E K ++ SE+LA+A+GLIST G TLRI KNLR
Sbjct: 58 RLAGRMEKAGYVPDTQLVLHDVEEEEKMFKLSHHSEKLAIAFGLISTTAGTTLRIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I+ REIIVRD
Sbjct: 118 VCGDCHTSTKLISKIDGREIIVRD 141
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 45/270 (16%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
ALE+ + GI + + LL C L+E G+RF + GV P+ + ++
Sbjct: 337 ALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMV 396
Query: 73 TACGCFGAVDEGFQHFESVTRDYD------------INPTLE------------------ 102
G G +DE + E + + D I+ L+
Sbjct: 397 DLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPG 456
Query: 103 HFLGIVDLY---GRLQKIAEAREFIRNMQI-DASSVVW-ETLEKYAQTEPGLLLGEPSSS 157
H++ + ++Y G+ + +A+ R+ + + W E EK Q G S+
Sbjct: 457 HYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNE 516
Query: 158 L-----RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
+ RL K + AGY P T VL D+D+E K+ SE+LA+A+GL+ P G +R
Sbjct: 517 IYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIR 576
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRD 242
I KNLR+CG+CH F K +S IE + IIVRD
Sbjct: 577 ITKNLRVCGDCHTFCKFVSLIEQKTIIVRD 606
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K LE G+ PN TFV ++ AC G ++EG + F S+ +Y + P ++H+ +
Sbjct: 336 KALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCM 395
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE--PSSSLRLSNKKK 165
VDL GR ++ EA E I M ++ V+W L + L L E S L+L ++K
Sbjct: 396 VDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQK- 454
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
P +L ++ A + ++ L GL PGRT
Sbjct: 455 -----PGHYVLLSNIYANAGKWEDMAKTRDLMTKGGL-RKIPGRT 493
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 8/192 (4%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFES--VTRDYD--INPTLEHFLGIVDLY---GR 113
V+P S + ++ AC G +D + E + YD + L H ++ +
Sbjct: 626 VKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAK 685
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL-RLSNKKKDAGYMPY 172
++K+ E+R + V + + L+GE + L RL N K GY+P
Sbjct: 686 VRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPI 745
Query: 173 TEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSS 232
T+ VL D+ ++ KE+ +Y SE+LA+AYG++S P G +RI KNLR+C +CH+ K +S
Sbjct: 746 TQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISK 805
Query: 233 IENREIIVRDKT 244
+ REII RD +
Sbjct: 806 VTGREIIARDAS 817
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
RPN TFVGV++AC G VDEG + F + I PT++ + +VDL GR ++ EA
Sbjct: 559 RPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAE 618
Query: 122 EFIRNMQIDASSVVWETL 139
I++M + +S +W +L
Sbjct: 619 LLIKSMPVKPTSSIWSSL 636
>gi|449449711|ref|XP_004142608.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g25580-like [Cucumis sativus]
Length = 671
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 126/261 (48%), Gaps = 36/261 (13%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVC-----MDLKLLEAGKRFENDGVRPNWSTFVGVI 72
A+++ + K G+ D I + + C D +L +N G+ P+ +V ++
Sbjct: 393 AIDLFYEFKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIV 452
Query: 73 TACGCFGAVDEGFQHFESVTRD--YDINPTLEHF---LGIVDLYGRLQKIAEAREFIR-N 126
G G VDE + E + + DI T+ + G+++L R ++ E + R N
Sbjct: 453 DMLGSIGFVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLN 512
Query: 127 MQIDA------SSVVWETLEKYAQTEPGLL----------LGEPSSS--------LR-LS 161
Q A +S + + EK LL G+ S LR L
Sbjct: 513 EQSKAGLLPVKASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLR 572
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+ K+AGY+P T +VL D+DQEAK SERLAVAYGLIS+ +R+ KNLR+CG
Sbjct: 573 EQMKEAGYIPETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCG 632
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH+ +K +S I RE+I+RD
Sbjct: 633 DCHSALKIISKIVGRELIIRD 653
>gi|346703119|emb|CBX25218.1| hypothetical_protein [Oryza brachyantha]
Length = 596
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 136/291 (46%), Gaps = 53/291 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG--------- 53
N+ L+ L +AAL++ D+++ G+ +D I+ +L C +L++ G
Sbjct: 294 NAMLQGLAAHGHGRAALDLFDRMRGSGVPVDGVTILSVLCSCAHAELVDEGLEYFDKMEI 353
Query: 54 -----KRFENDG-----------------------VRPNWSTFVGVITACGCFGAVDEGF 85
R E+ G + PN + + +I AC G ++ G
Sbjct: 354 EFGIEPRIEHYGCVVDMLSRAGRLDDAEKLIHEMPIVPNAAIYRSLIRACDIHGNLELG- 412
Query: 86 QHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA---REFIRNMQIDASSVVWETLEKY 142
+ + R +D + + H L I +LY R+ + EA R+ +++M ID S +L
Sbjct: 413 ERMITELRQHDPDDSGNHVL-IANLYARMNRWEEAKKTRKEMKSMGIDKSP--GSSLLDM 469
Query: 143 AQTEPGLLLGE---PSSSL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
L+G+ P+S + + + G+ T VL D+++E K TY S
Sbjct: 470 NGVLHEFLVGDKTHPASKEIYTMVEEIEARLSEHGHRSSTTSVLFDVEEEDKADTLTYHS 529
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
ERLA+ + LI++ PG +RI KNLR+C +CH K +S + REI++RD+T
Sbjct: 530 ERLAIPFALIASDPGTPIRIIKNLRVCADCHESAKLVSRVYGREIVMRDRT 580
>gi|190612665|gb|ACE80710.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 61/84 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS K K+AGY+P T +VL D+D+E K + SE+LA+A+GLIST PG LRI KNLR
Sbjct: 58 RLSEKMKEAGYVPDTRFVLHDVDEEDKVFRLCHHSEKLAIAFGLISTVPGTPLRIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH+ K +S I REIIVRD
Sbjct: 118 VCVDCHSATKFMSKIVGREIIVRD 141
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 49/272 (18%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
AL+ K+K+ GI D + +L C ++ G F + P + ++
Sbjct: 390 ALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIV 449
Query: 73 TACGCFGAVDEGFQHFESVTRDYDI--------------------------------NPT 100
G G +DE +S+ + D +P
Sbjct: 450 DLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPG 509
Query: 101 LEHFLG-IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS--- 156
FL + GR + + R ++N ++ W +E Q + G+ +
Sbjct: 510 SYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPG-WSYIEVEGQVH-SFVAGDHAHVRA 567
Query: 157 ---SLRL---SNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
SL+L + K GYMP T +VL ++++E KE SE+LA+A+GLIST PG T
Sbjct: 568 EEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGST 627
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KNLR+CG+CH+ +K S + REII+RD
Sbjct: 628 IRIVKNLRVCGDCHSMMKYASKLSRREIILRD 659
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 44 CMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH 103
C D + L+ + ++ G+ P+ F+ ++TAC G VD+G FES+ DY I PT++H
Sbjct: 386 CFD-QALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKH 444
Query: 104 FLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL-----------------EKYAQTE 146
+ IVDL GR ++ EA FI++M I+ V+W L EK Q E
Sbjct: 445 YTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLE 504
Query: 147 PGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEK 187
P P S + LSN G E V + EK
Sbjct: 505 P----KHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEK 541
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 123/273 (45%), Gaps = 48/273 (17%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF----ENDGVRPNWSTFVGVIT 73
ALE+ +K+ G+ D + +L C L+E G R EN GV+PN + V+
Sbjct: 292 ALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSMENCGVKPNVKHYGSVVD 351
Query: 74 ACGCFGAVDEGFQHFESVT------------------RDYDINPTLEH------------ 103
G G + E + S+ R+ +I T+
Sbjct: 352 LLGRAGRLHEAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGD 411
Query: 104 FLGIVDLYG---RLQKIAEAREFIRNMQ---------IDASSVVWETLEKYAQTEPGLLL 151
F+ + ++Y R + RE ++N I+ + V+ + E +
Sbjct: 412 FVLLSNVYAARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREI 471
Query: 152 GEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
+R + K+ GY+ T +VL D+ +E KE + SE+LAVA+GLIST G +
Sbjct: 472 YAKLDEIRF--RVKEYGYVAETSFVLHDIGEEDKENVLGHHSEKLAVAFGLISTSEGTPI 529
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
++ KNLRICG+CH IK +S I +REIIVRD+
Sbjct: 530 QVIKNLRICGDCHFVIKLISKIYDREIIVRDRV 562
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K LE ++ + GV P+ +++ V+ AC G V+EGF+ F S+ + + P ++H+ +
Sbjct: 291 KALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSM-ENCGVKPNVKHYGSV 349
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
VDL GR ++ EA + + +M V+W+TL ++T + + E S
Sbjct: 350 VDLLGRAGRLHEAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVS 398
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEG--FQHFESVTRDYDINPTLEHFLGIVDLY 111
KR E DG +PN + +G ++AC G EG + V R +D+N + + ++D+Y
Sbjct: 195 KRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVER-FDMNAQVCNV--VIDMY 251
Query: 112 GRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMP 171
+ + +A +M V W T+ + GE +L L K +G P
Sbjct: 252 AKCGFVDKAYLVFESMSCRKDIVTWNTM-----IMAFAMHGEGCKALELFEKMDQSGVSP 306
>gi|358357240|gb|AEU08460.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS K+AGY+P T YVL D+++E KE + SE+LA+A+GLISTPPG + I KNLR
Sbjct: 58 RLSGWMKEAGYVPDTSYVLHDVEEEQKELSLCWHSEKLAIAFGLISTPPGAPICIIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I R ++VRD
Sbjct: 118 VCGDCHTATKFISKIVGRIVVVRD 141
>gi|115473599|ref|NP_001060398.1| Os07g0636900 [Oryza sativa Japonica Group]
gi|113611934|dbj|BAF22312.1| Os07g0636900, partial [Oryza sativa Japonica Group]
Length = 352
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 80/308 (25%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
++++A V D++ + S II L N + + L + ++G++PN TFVGV+
Sbjct: 30 DIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLI 89
Query: 74 AC-----------------------------GCF-------GAVDEGFQHFESVTRDYD- 96
AC GC G V+E Q S+T + D
Sbjct: 90 ACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDT 149
Query: 97 -----------INPTLE------------------HFLGIVDLYGR---LQKIAEAREFI 124
I+ +E H++ + ++Y + + +AE R+ I
Sbjct: 150 IIWRALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTI 209
Query: 125 RNMQIDA----SSVVWETLEKYAQTEPGLLLGEPSSSL-----RLSNKKKDAGYMPYTEY 175
R I SS+ W+ EK + G L S + + ++ K AGY P T
Sbjct: 210 RRDNIQRIPGRSSIEWD--EKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQAGYKPMTGL 267
Query: 176 VLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIEN 235
VL+D+D+++KE+ SE+LA+A+ L++TP T+RI KNLR C +CH+ +K +S + +
Sbjct: 268 VLQDIDEQSKERSLAEHSEKLAIAFALLTTPARSTIRITKNLRACEDCHSAMKLISLVYD 327
Query: 236 REIIVRDK 243
R++IVRD+
Sbjct: 328 RKLIVRDR 335
>gi|357158917|ref|XP_003578281.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 547
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 107/241 (44%), Gaps = 46/241 (19%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEG-FQHFESVTRDYDINP---TLEH 103
+ LE R E+ G PN TF V+ AC G V+EG F+ E + + + P +
Sbjct: 289 RALELFTRMESTGFVPNKITFNSVLNACSHGGFVEEGLFEKAEVIMQMMPMEPDASVWKA 348
Query: 104 FLGIVDLYGRLQKIAEA-REFIRNMQIDASSVV-----------WETLEKY--------A 143
+G Y + +A R I D + V W+ +
Sbjct: 349 LVGACRTYKNFKLGKKAGRRLIEAAPNDHTGYVLLSNIYALDGNWKGVHNVRKRMFDSGV 408
Query: 144 QTEPG------------LLLGEPSSSLR---------LSNKKKDAGYMPYTEYVLRDLDQ 182
Q PG + G+ S S + + + K AGY P T VL D+D
Sbjct: 409 QKVPGSSSIEVDGVIHEFISGDKSHSRKKDVYEMLGEICQQLKIAGYAPDTSQVLLDIDD 468
Query: 183 E-AKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVR 241
E KE SE+LA+A+GLIST PG +R+ KNLR+CG+CHN IK LS I R IIVR
Sbjct: 469 EDVKESSLALHSEKLAIAFGLISTAPGTPIRVVKNLRVCGDCHNAIKLLSKIYGRSIIVR 528
Query: 242 D 242
D
Sbjct: 529 D 529
>gi|297736355|emb|CBI25078.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 36/185 (19%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG--IVDLYGRLQKIA 118
++ N T+V ++ A GA+ +G + + + N L+ F+G ++DLYG+ ++
Sbjct: 327 IKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKT---NLHLDVFVGTCLIDLYGKCGRLV 383
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLR 178
+A + + SSV W + + Y +VL+
Sbjct: 384 DAMCLFYQVPRE-SSVPWNAI------------------------------ISYYSFVLQ 412
Query: 179 DLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREI 238
D++++ KE T SERLA+A+G+ISTPP +RI KNLR+CG+CHN K +S I REI
Sbjct: 413 DVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREI 472
Query: 239 IVRDK 243
+VRD
Sbjct: 473 VVRDS 477
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 100/192 (52%), Gaps = 11/192 (5%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K LE +R +GV+PN+ TFVG+++AC G +D GF HFES+++ + I P ++H+ +
Sbjct: 642 KALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMSK-FGIEPGIDHYACM 700
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
V L GR KI EA+EF++ M I ++VVW +L + + LG ++ + +S D+
Sbjct: 701 VSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADS 760
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
G Y+L +K + R R + + PG + + + E H FI
Sbjct: 761 G-----SYILLSNIFASKGMWASVRMVREKMDMSRVVKEPGWSW-----IEVNNEVHRFI 810
Query: 228 KKLSSIENREII 239
+ ++ + +I
Sbjct: 811 ARDTAHRDSTLI 822
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 59/86 (68%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + KDAGY+P VL ++ +E KE+ Y SE+LA+AYGLISTPPG L I KNLR
Sbjct: 635 RLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLR 694
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
C +CH K +S I R+I+VRD T
Sbjct: 695 ACVDCHAAAKFISRIVGRKIVVRDST 720
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+G+ + T V ++AC G + EG Q F S+ D+ + P HFL +VDL R ++
Sbjct: 460 QEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRL 519
Query: 118 AEAREFIRNMQIDASSVVWETL 139
A I +M +V W +L
Sbjct: 520 EAAENLIHDMPFLPDAVAWTSL 541
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 11/186 (5%)
Query: 39 ELLNVCMDLKLLEAGKRFEN-----DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTR 93
++ C L L GK+ +GV+PN+ F+ V+TAC G VDE +++F S+T+
Sbjct: 342 SIMPACAHLTTLHLGKQLHGYIIRMEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQ 401
Query: 94 DYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
DY I P LEH+ + DL GR+ ++ EA EFI +M I+ + VW TL + + L E
Sbjct: 402 DYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAE 461
Query: 154 PSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVA-YGLISTPPGRTLR 212
S + ++ G YVL A + + R R+A+ G+ P +
Sbjct: 462 KVSKKLFTVDPQNIG-----AYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIE 516
Query: 213 IKKNLR 218
IK +
Sbjct: 517 IKNKVH 522
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+ T VL D+++E K SERLA+ +G+ISTP G T+R+ KNLR+C +CH
Sbjct: 552 GYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTAT 611
Query: 228 KKLSSIENREIIVRDKT 244
K +S I REI+VRD +
Sbjct: 612 KFISKIVGREIVVRDNS 628
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 126/277 (45%), Gaps = 55/277 (19%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGC 77
A+ V +++ G+ D I LL+ C L++ GKR+ D +R ++S V I GC
Sbjct: 200 AVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRY-FDSMRKDFS-IVPKIEHYGC 257
Query: 78 F-------GAVDEGFQHFESVTRDYDINPTL-EHFLGIVDLYGRLQKIAE--AREFIRNM 127
G V E + + + D NP + + +G L K+ E R+ IRN
Sbjct: 258 MVDMLCRAGLVKEALKFVQEMP--IDPNPVVWRTLINACRAHGEL-KLGEKITRQLIRNE 314
Query: 128 QIDASSVV-----------WE--TLEKYAQTEPGLLLGEPSSSLRLSNK----------- 163
+ S+ V WE T + A G+ S+ + L N+
Sbjct: 315 PMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELDNEIYEFVAGDKSH 374
Query: 164 ----------------KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPP 207
K AGYMP T VL D+D E KE SE+LA+A+ L++TPP
Sbjct: 375 AQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRHSEKLAIAFALLNTPP 434
Query: 208 GRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
G +RI KNLR+C +CH+ K +S I NREI+VRD+
Sbjct: 435 GTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRN 471
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 22 MDKLKNIGIFLDSPDIIELLNVCMDLKL----LEAGKRFEN---DGVRPNWSTFVGVITA 74
+DK N+ + +I+ +V L + +EA FE GV P+ F+G+++A
Sbjct: 166 VDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSA 225
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G VD+G ++F+S+ +D+ I P +EH+ +VD+ R + EA +F++ M ID + V
Sbjct: 226 CSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPV 285
Query: 135 VWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVL 177
VW TL + L LGE + + N+ M + YVL
Sbjct: 286 VWRTLINACRAHGELKLGEKITRQLIRNEP-----MHESNYVL 323
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 49/272 (18%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
AL+ K+K+ GI D + +L C ++ G F + P + ++
Sbjct: 303 ALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIV 362
Query: 73 TACGCFGAVDEGFQHFESVTRDYDI--------------------------------NPT 100
G G +DE +S+ + D +P
Sbjct: 363 DLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPG 422
Query: 101 LEHFLG-IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS--- 156
FL + GR + + R ++N ++ W +E Q + G+ +
Sbjct: 423 SYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPG-WSYIEVEGQVH-SFVAGDHAHVRA 480
Query: 157 ---SLRL---SNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
SL+L + K GYMP T +VL ++++E KE SE+LA+A+GLIST PG T
Sbjct: 481 EEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGST 540
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KNLR+CG+CH+ +K S + REII+RD
Sbjct: 541 IRIVKNLRVCGDCHSMMKYASKLSRREIILRD 572
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 44 CMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH 103
C D + L+ + ++ G+ P+ F+ ++TAC G VD+G FES+ DY I PT++H
Sbjct: 299 CFD-QALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKH 357
Query: 104 FLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL-----------------EKYAQTE 146
+ IVDL GR ++ EA FI++M I+ V+W L EK Q E
Sbjct: 358 YTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLE 417
Query: 147 PGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEK 187
P P S + LSN G E V + EK
Sbjct: 418 P----KHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEK 454
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+AGY P +VL D+D+ KE+ + SE+LA+AYGL+ TPPG +RI KNLR+
Sbjct: 790 LTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRV 849
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH K +S I REI+ RD
Sbjct: 850 CGDCHTATKFISKIRKREIVARD 872
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 13/147 (8%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
KR + V PN TF VI+ACG G V EG + F + D+ + P +H+ +VDL GR
Sbjct: 608 KRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGR 667
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLG----------EPSSS---LRL 160
++ EA EFI+ M + VW L ++ + L EPS++ + L
Sbjct: 668 AGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTL 727
Query: 161 SNKKKDAGYMPYTEYVLRDLDQEAKEK 187
SN AG + V + +D + +K
Sbjct: 728 SNIYAQAGRWDDSTKVRKVMDDKGLKK 754
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFL 105
+LLE R +GV PN TF+ ++ AC GA+++G Q H E ++ + +L+
Sbjct: 371 FQLLE---RMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQ--T 425
Query: 106 GIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
I ++Y + I EA + M+ + + V W +L
Sbjct: 426 AIFNMYAKCGSIYEAEQVFSKME-NKNVVAWASL 458
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
KR E +GV+PN+ F+ V+TAC G VDE +++F S+T+DY I P LEH+ + DL GR
Sbjct: 387 KRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGR 446
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYT 173
+ ++ EA EFI +M I+ + VW TL + + L E S + ++ G
Sbjct: 447 VGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIG----- 501
Query: 174 EYVLRDLDQEAKEKPQTYRSERLAVA-YGLISTPPGRTLRIKKNLR 218
YVL A + + R R+A+ G+ P + IK +
Sbjct: 502 AYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVH 547
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+ T VL D+++E K SERLA+ +G+ISTP G T+R+ KNLR+C +CH
Sbjct: 577 GYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTAT 636
Query: 228 KKLSSIENREII 239
K +S I REI+
Sbjct: 637 KFISKIVGREIV 648
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 129/282 (45%), Gaps = 58/282 (20%)
Query: 11 REREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK----RFEND-GVRPNW 65
R RE A+ ++D +K + D+ +L+ C L+ GK + E + V+P
Sbjct: 445 RGRE---AISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPAL 501
Query: 66 STFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK------IAE 119
S + ++ G G +DE + + R +I PT + + ++ RL K I+
Sbjct: 502 SHYSCMVDLLGRAGHLDEAY----VIIRTMEIKPTSDIWAALLTA-SRLHKNIKLAEISA 556
Query: 120 AREFIRNMQIDASSVV----------WETLE--------KYAQTEPG------------L 149
+ F N ++ +S + W+ +E K + PG
Sbjct: 557 QKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRF 616
Query: 150 LLGEPSSSL---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAY 200
L+G+ S L + K+AGY P T V D+++E KEK SERLA+A+
Sbjct: 617 LVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAF 676
Query: 201 GLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
LI+T PG +RI KNLR+CG+CH K +S + REII+RD
Sbjct: 677 ALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRD 718
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 80/308 (25%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
++++A V D++ + S II L N + + L + ++G++PN TFVGV+
Sbjct: 170 DIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLI 229
Query: 74 AC-----------------------------GCF-------GAVDEGFQHFESVTRDYD- 96
AC GC G V+E Q S+T + D
Sbjct: 230 ACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDT 289
Query: 97 -----------INPTLE------------------HFLGIVDLYGR---LQKIAEAREFI 124
I+ +E H++ + ++Y + + +AE R+ I
Sbjct: 290 IIWRALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTI 349
Query: 125 RNMQIDA----SSVVWETLEKYAQTEPGLLLGEPSSSL-----RLSNKKKDAGYMPYTEY 175
R I SS+ W+ EK + G L S + + ++ K AGY P T
Sbjct: 350 RRDNIQRIPGRSSIEWD--EKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQAGYKPMTGL 407
Query: 176 VLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIEN 235
VL+D+D+++KE+ SE+LA+A+ L++TP T+RI KNLR C +CH+ +K +S + +
Sbjct: 408 VLQDIDEQSKERSLAEHSEKLAIAFALLTTPARSTIRITKNLRACEDCHSAMKLISLVYD 467
Query: 236 REIIVRDK 243
R++IVRD+
Sbjct: 468 RKLIVRDR 475
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 59/86 (68%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + KDAGY+P VL ++ +E KE+ Y SE+LA+AYGLISTPPG L I KNLR
Sbjct: 635 RLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLR 694
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
C +CH K +S I R+I+VRD T
Sbjct: 695 ACVDCHAAAKFISRIVGRKIVVRDST 720
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+G+ + T V ++AC G + EG Q F S+ D+ + P HFL +VDL R ++
Sbjct: 460 QEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRL 519
Query: 118 AEAREFIRNMQIDASSVVWETL 139
A I +M +V W +L
Sbjct: 520 EAAENLIHDMPFLPDAVAWTSL 541
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 118/262 (45%), Gaps = 78/262 (29%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHF----------------------------- 88
N GV+P+ TFV +++AC G V+EG ++
Sbjct: 630 NLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRF 689
Query: 89 ---ESVTRDYDINPT---LEHFLGIVDLYGRLQKIAEARE------------FIRNMQID 130
E+ ++ ++PT L +G L+ +A E ++ I
Sbjct: 690 AEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNIC 749
Query: 131 ASSVVWETLEKYAQTEPGL--LLGEPSSS-LRLSNKK----------------------- 164
A++ WE +EK + + GL + +P+ S ++L NK
Sbjct: 750 ATTGKWEDVEK-IRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEEL 808
Query: 165 ----KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRIC 220
K+AGY+P Y L+D D+E KE SERLA+AYGLIS+P G TL+I KNLR+C
Sbjct: 809 KKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLKIFKNLRVC 868
Query: 221 GECHNFIKKLSSIENREIIVRD 242
G+CH+ K S I R+I++RD
Sbjct: 869 GDCHSVYKFASGILGRKIVLRD 890
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 18/210 (8%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFLG 106
+L EA +N ++P+ + + ++ AC G V+ G +++ ++++P + +++
Sbjct: 525 QLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNL---FELDPENVGYYVL 581
Query: 107 IVDLYGRLQK---IAEAREFIRNMQIDASSVVWETLE---------KYAQTEPGLLLGEP 154
+ ++Y ++ K + E R +R + + W ++E QTEP E
Sbjct: 582 MSNMYAKVGKWDGVDEVRSLVRRQNLQKTPG-WSSIEVKRSVNVFYSGNQTEPHPQHEEI 640
Query: 155 SSSLR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
+ LR L K + GY+ +VL+D++ + KE SERLA+A+G+I+TP L I
Sbjct: 641 QAELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHI 700
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRDK 243
KNLR+CG+CHN K +S I REIIVRD
Sbjct: 701 YKNLRVCGDCHNATKYISQITEREIIVRDS 730
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
R + +G++P+ TFV ++ AC G VD+G F+ + YDI P +H+ + D+ GR
Sbjct: 463 SRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGR 522
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
++ EA FI+NM I S VW L + + +G+ +S ++ GY
Sbjct: 523 AGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGY 578
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 32/243 (13%)
Query: 19 LEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-GVRPNWSTFVGVITACGC 77
E+M K K + D P + +++ + LL+ +RF + + P + + ++ AC
Sbjct: 414 FELMKKYK---VEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRM 470
Query: 78 FGAVDEGFQHFESVTRDYDINPTLEHFLG----IVDLY---GRLQKIAEAREFIRNMQID 130
++ G E R ++++P H G + ++Y GR + +A+ R+ ++ +
Sbjct: 471 HKNMELGVYAAE---RAFELDP---HDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVK 524
Query: 131 AS-SVVWETLEKYAQTEPGLLLGEPSSSLRL----------SNKKKDAGYMPYTEYVLRD 179
+ W +E L + + R+ S K K+ GY+P T +VL
Sbjct: 525 KQPACSWVEIENAVH----LFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLF 580
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREII 239
+DQ+ +E+ Y SE+LA+A+ L++TP G +RIKKN+R+CG+CH IK +S + +REII
Sbjct: 581 VDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREII 640
Query: 240 VRD 242
VRD
Sbjct: 641 VRD 643
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 8/138 (5%)
Query: 22 MDKLKNIGIFLDSPDIIE---LLNVCMDLKL-LEAGKRFEND---GVRPNWSTFVGVITA 74
+D K + L PD++ +L C L E RFE G+ PN +F+ V+TA
Sbjct: 341 IDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTA 400
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G +DEG +FE + + Y + P + H++ VDL GR+ + A FIR M I+ ++
Sbjct: 401 CSHSGLLDEGLYYFE-LMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAA 459
Query: 135 VWETLEKYAQTEPGLLLG 152
VW L + + LG
Sbjct: 460 VWGALLGACRMHKNMELG 477
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ K K GY P T + L ++ +E KE SERLA+A+GLI+TPPG L I KNLR+
Sbjct: 778 MTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRV 837
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH IK +S IE+REI++RD
Sbjct: 838 CGDCHTVIKMVSKIEDREIVMRD 860
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 67/121 (55%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L+ ++ E +G+ + TF+ VI C G V+EG ++F+S+ RDY I PT+EH+ +
Sbjct: 590 KALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACM 649
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VDLY R K+ EA I M A +VW TL + + LG+ ++ LS + D+
Sbjct: 650 VDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDS 709
Query: 168 G 168
Sbjct: 710 A 710
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 63/86 (73%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L+ + K+ GY+P ++VL D+D+ K + SE+LA+A+GLIST G TLRI KNLR
Sbjct: 512 QLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTLRIFKNLR 571
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+CG+CHN K +S IE+REII+RD T
Sbjct: 572 VCGDCHNAAKVISMIEDREIILRDTT 597
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+R +++GV PNW TFV V+TAC G D G Q FE + Y I P ++H+ +VDL R
Sbjct: 331 ERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCR 390
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYT 173
K+ A +FIR+M + + TL + L E ++ + + AG Y
Sbjct: 391 AGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAG--AYV 448
Query: 174 EYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+ L ++ A + R R ++ TP + IK L
Sbjct: 449 Q--LANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLH 491
>gi|190612791|gb|ACE80773.1| pentatricopeptide repeat protein [Radula complanata]
Length = 152
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + GY+P T +VLRDLD+E+K+ + SE LA+ +GLISTPPG L I KNLR
Sbjct: 58 RLHQQITAVGYIPDTRFVLRDLDEESKQVRLRHHSEXLAITFGLISTPPGTPLLIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CHN IK +S + R+I VRD
Sbjct: 118 VCGDCHNAIKFISKVTERKITVRD 141
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 131/291 (45%), Gaps = 55/291 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----E 57
N+ + AL + ++ + G D + +L C LL G+R+ +
Sbjct: 434 NAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQ 493
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP---TLEHFLGIVDLYGRL 114
+ V P + +I G G DE E++ ++ ++ P LG ++ R+
Sbjct: 494 DYKVSPKLPHYGCMIDLFGRAGLFDEA----ETLVKNMEMKPDGAIWCSLLGACRIHRRI 549
Query: 115 QKIAEA-------------REFIRNMQIDASSVVWETLEKY--------AQTEPG----- 148
+ +AE+ ++ I A + WE + K + PG
Sbjct: 550 E-LAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIE 608
Query: 149 -------LLLGE---PSSSL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYR 192
L+G+ P S+ + + + AG++P T VL D+D+E KE ++
Sbjct: 609 VDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHH 668
Query: 193 SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
SE+LA+A+GLIST PG T+RI KNLR+CG CH+ K +S I NREII RD+
Sbjct: 669 SEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDR 719
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 55/278 (19%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
AL + +++ GI D + LL C L++ G+ F N G++P + ++
Sbjct: 459 ALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMV 518
Query: 73 TACGCFGAVDEGFQHFESV-----------------------------TRDYDINP-TLE 102
G G +D+ F ++ ++++P +
Sbjct: 519 DMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVG 578
Query: 103 HFLGIVDLYGRLQK---IAEAREFIRNMQIDASSVVWETLEK-------YAQTEPGLLLG 152
+++ + ++Y ++ K + E R +R + + W ++E Y+ + +
Sbjct: 579 YYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPG-WSSIEVKRSVNVFYSGNQMNI--- 634
Query: 153 EPSSS------LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTP 206
P L L K + GY+P +VL+D++++ KE+ SERLA+A+G+I+TP
Sbjct: 635 HPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTP 694
Query: 207 PGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
P L I KNLR+CG+CHN K +S I REIIVRD
Sbjct: 695 PRTPLHIYKNLRVCGDCHNATKYISKITEREIIVRDSN 732
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L + + +G+ P+ TFV ++ AC G VD+G F + Y I P +H+ +
Sbjct: 458 KALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACM 517
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VD++GR ++ +A +FIRNM I S +W L + + +G+ +S K+
Sbjct: 518 VDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNV 577
Query: 168 GY 169
GY
Sbjct: 578 GY 579
>gi|358357232|gb|AEU08456.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 61/84 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K+AGY+P T +VL D+++E K+ + SE+LA+A+GLIST PG LR+ KNLR
Sbjct: 58 RLSWQMKEAGYVPDTRFVLHDVEKEQKDISLCHHSEKLAIAFGLISTSPGSPLRVIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH IK +S I R I VRD
Sbjct: 118 VCGDCHTAIKFISKISGRAIAVRD 141
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 109/259 (42%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G PN+ TFV +++AC GAV+ G + F+S+ Y I P EH+ IVD+ GR + +
Sbjct: 408 GPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQ 467
Query: 120 AREFIRNMQIDASSVVWETLEK----YAQTEPGLLLGE------PSSS---LRLSNK--- 163
A EFI+ M I + VW L+ + + G+L E P S + LSN
Sbjct: 468 AFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAA 527
Query: 164 -------------------KKDAGYMPYT------EYVLRDLDQEAKEKPQTY----RSE 194
KK AGY T + +D + ++ QT R++
Sbjct: 528 AGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNK 587
Query: 195 RLAVAY-------------------------------GLISTPPGRTLRIKKNLRICGEC 223
A Y GL++ P +RI KNLRICG+C
Sbjct: 588 MEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRITKNLRICGDC 647
Query: 224 HNFIKKLSSIENREIIVRD 242
H+F K +S REIIVRD
Sbjct: 648 HSFFKFVSGSVKREIIVRD 666
>gi|358357218|gb|AEU08449.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS K+AGY+P T +VL D+++E KE Y SE+LA+ +GLIS PPG + I KNLR
Sbjct: 58 RLSGWMKEAGYVPDTGFVLHDVEEEQKEFSLCYHSEKLAIGFGLISLPPGMPIHIIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I RE++VRD
Sbjct: 118 VCGDCHTATKFISKIVGREVVVRD 141
>gi|302754748|ref|XP_002960798.1| hypothetical protein SELMODRAFT_75478 [Selaginella moellendorffii]
gi|300171737|gb|EFJ38337.1| hypothetical protein SELMODRAFT_75478 [Selaginella moellendorffii]
Length = 481
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 121/273 (44%), Gaps = 53/273 (19%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
+L + ++++ G+ LD L+ C + + RF D GV P F ++
Sbjct: 195 SLRLARRMQHEGMILDGNCFANLIFSCANGRRDAEACRFFMDMRSDYGVVPGKEHFGCLV 254
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIV----DLYGRLQKIAEAREFIRNM- 127
A G G + + E + + + P EH ++ L+G Q+I + E + M
Sbjct: 255 DAVGRAGHLKDA----EDLIKAMPMQPD-EHVWSVLFASAQLHGDAQRIQRSAEIMMKMN 309
Query: 128 -QIDA-------SSVVWETLEKYAQ--------TEPG---LLLGEPSSSLRLSNK----- 163
Q+D ++ WE K + EPG + + S ++
Sbjct: 310 PQLDPLGTGANRTAARWEEARKVRELMRKRGIKKEPGKSMITINNVVHSFMARDRSHIHT 369
Query: 164 --------------KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
KK+ Y+P T YVL D+ ++ K K Y SERLA+AYG I+TPPG
Sbjct: 370 KEIYAEVDRITEICKKEENYIPDTRYVLHDVPEDQKPKLLYYHSERLAMAYGHIATPPGS 429
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
LR+ KNLR+CG+CH K + I REIIVRD
Sbjct: 430 ALRVIKNLRVCGDCHTISKMWAKIMQREIIVRD 462
>gi|358357212|gb|AEU08446.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL ++AGY+P T +VL D++ E KE + SE+LA+A+GLISTPPG +RI KNLR
Sbjct: 58 RLQGLMEEAGYVPDTRFVLHDVEGEQKEFSLCHHSEKLAIAFGLISTPPGTPIRIIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH IK +S I R I+VRD
Sbjct: 118 VCGDCHTAIKFISRIVRRAIVVRD 141
>gi|190612901|gb|ACE80828.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 62/84 (73%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + + AG +P T+ VL D+++E K ++ SE+LA+A+GLISTP G TLRI KNLR
Sbjct: 58 RLAGRMEKAGCVPDTQLVLHDVEEEEKMFKLSHHSEKLAIAFGLISTPAGTTLRIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I+ REIIVRD
Sbjct: 118 VCGDCHTSTKLISKIDGREIIVRD 141
>gi|358357244|gb|AEU08462.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + K+ GY+P T +VL D+++E KE Y SE+LA+A+GLISTP G +RI KNLR
Sbjct: 58 RLAERMKETGYVPDTRFVLHDVEEEQKEFSLCYHSEKLAMAFGLISTPAGTPMRIIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I R I+VRD
Sbjct: 118 VCGDCHTATKFISKIVGRVIVVRD 141
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Query: 142 YAQTEPGLLLGEPSSSLRLSNKK-KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAY 200
YA + E LR+ N K K GY+P +VL+D++++ KE+ T SERLA+ +
Sbjct: 705 YAGNQSHPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVF 764
Query: 201 GLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
G+ISTPP +RI KNLR+CG+CHN K +S I REIIVRD
Sbjct: 765 GIISTPPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDS 807
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L+ K DGV+ + TFV +++AC G VDE F+++ ++Y I P L+H+ +
Sbjct: 536 KALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCM 595
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VDL+GR + +A + NM I A + +W TL + LG +S L ++
Sbjct: 596 VDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENV 655
Query: 168 GY 169
GY
Sbjct: 656 GY 657
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 123/248 (49%), Gaps = 30/248 (12%)
Query: 15 VKAALEVMDKLKNIGIFLDSPD------IIELLNVCMDLKLLEAGKRFENDGVRPNWSTF 68
VK + D + N+ + +PD II+LL C K EA + E+ P +
Sbjct: 542 VKEGRKYFDSMHNV--YGVNPDEEHYARIIDLL--CRAGKFSEAKEVMESMPFEPGAPIW 597
Query: 69 VGVITACGCFGAVDEGFQHFESVTRDYDINPTLE-HFLGIVDLY---GRLQKIAEAREFI 124
++ C G +D G E+ R +++ P + ++ + ++Y G+ +A+ R+ +
Sbjct: 598 EALLAGCRIHGNIDLGI---EAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLM 654
Query: 125 RNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL---------RLSNKKKDAGYMPYTE 174
R+ + W +E + L+G+ + +L + + GY+P T+
Sbjct: 655 RDRGVKKEPGCSWIEVENKVHS---FLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTK 711
Query: 175 YVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIE 234
VL D++ + KE + SE+LAVAYG + P G T+R+ KNLRICG+CHN K +S +
Sbjct: 712 CVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVV 771
Query: 235 NREIIVRD 242
REI+VRD
Sbjct: 772 GREIVVRD 779
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+G+ P+ +F+ VI+AC G V EG ++F+S+ Y +NP EH+ I+DL R K +
Sbjct: 520 EGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFS 579
Query: 119 EAREFIRNMQIDASSVVWETL 139
EA+E + +M + + +WE L
Sbjct: 580 EAKEVMESMPFEPGAPIWEAL 600
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 120/273 (43%), Gaps = 79/273 (28%)
Query: 51 EAGKRF---ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA K F E + + N TF+ ++ AC G D+G F+ + + Y + L+H+ +
Sbjct: 386 EAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCL 445
Query: 108 VDLYGR-------------------------------LQKIAE-----AREFIRNMQIDA 131
VDL GR + K AE A E +R D+
Sbjct: 446 VDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDS 505
Query: 132 SSVV-----------WETL--------EKYAQTEPGLLLGEPSSSLR------------- 159
+S V W+ + +K + EPG+ E + +
Sbjct: 506 ASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHV 565
Query: 160 --------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
L+++ K GY+P T VL D+D E KE+ + SE+LA+A+ L++TP G +
Sbjct: 566 EINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPI 625
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
R+ KNLR+C +CH IK +S I+ EIIVRD +
Sbjct: 626 RVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSS 658
>gi|190612953|gb|ACE80854.1| pentatricopeptide repeat protein [Lepidogyna hodgsoniae]
Length = 152
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS K+AGY+P T +VL D+D+E KE SE+LA+A GLISTPPG LRI KNLR
Sbjct: 58 RLSGLMKEAGYVPDTSFVLHDVDEEKKEDRLCRHSEKLALASGLISTPPGTPLRIFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
ICG+CH K ++ + R II+RD
Sbjct: 118 ICGDCHTATKFIAKLVGRGIIIRD 141
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 115/263 (43%), Gaps = 83/263 (31%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK---- 116
+ PN TF+ V++AC G V+EG ++F + + I P EH+ ++DL GR K
Sbjct: 444 IAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEA 503
Query: 117 --------------------------------IAEAREFIR-------------NMQIDA 131
+ A EF+R NM A
Sbjct: 504 ERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMY--A 561
Query: 132 SSVVWETL--------EKYAQTEPG-----------LLLGEPSSSL----------RLSN 162
S+ WE E+ + +PG + + E +S ++
Sbjct: 562 SAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLK 621
Query: 163 KKKDAGYMPYTEYVL---RDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
K K AGY+P + L +++ + +E+ Y SE+LAVA+GLIST G + + KNLRI
Sbjct: 622 KMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVPILVVKNLRI 681
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN +K +S++ REI VRD
Sbjct: 682 CGDCHNAVKLISALTGREITVRD 704
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%)
Query: 51 EAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFLGIVD 109
EA EN ++PN + +++AC V S + +++NP + ++ + +
Sbjct: 484 EAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVI---SAQKLFELNPDGVSGYVCLSN 540
Query: 110 LYG---RLQKIAEAREFI--RNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLR----- 159
+Y R + + R + R ++ S E + Q G E S +
Sbjct: 541 IYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKD 600
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K AGY P T VL D+++E KEK SERLA+A+ LI+T PG T+RI KNLR+
Sbjct: 601 LNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRV 660
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH IK +S + NREII+RD
Sbjct: 661 CGDCHTVIKMISKLTNREIIMRD 683
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV P+ F V++AC G VDEG + F +TRDY + P H+ +VDL GR + E
Sbjct: 425 GVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDE 484
Query: 120 AREFIRNMQIDASSVVWETL 139
A I NM++ + VW L
Sbjct: 485 AYAVIENMKLKPNEDVWTAL 504
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+++ + AGY+P T+ +L D++ E KE Y SERLA+A+GLISTPPG LR+ KNLR+
Sbjct: 681 LNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRV 740
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH K +S + REI+VRD
Sbjct: 741 CSDCHTATKYISKLRGREILVRD 763
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 11/180 (6%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+ + + DGV+ + +FV V++A G+V +G+Q+F ++ +D+ I PT E + +VD
Sbjct: 494 LQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVD 553
Query: 110 LYGRLQKIAEAREFIRNMQ-IDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
L GR +I EA + + + ++W TL +T + ++ L +G
Sbjct: 554 LLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSG 613
Query: 169 YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIK 228
VL ++ A + R +L + G + PGR+ ++ I H F++
Sbjct: 614 ----AYVVLSNVYAAAGDWDGVNRMRKLMRSRG-VKKEPGRS-----SIEILNRVHEFLE 663
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 30 IFLD--SPDIIELLNVCMDL-------KLLEAGKRFENDGVRPNWSTFVGVITACGCFGA 80
IF+D S D+I +C+ + L+ + + +G RP +T V V+ C A
Sbjct: 364 IFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAA 423
Query: 81 VDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWET- 138
+ +G Q H + + + +E ++++YG+ K+AEA M +VW +
Sbjct: 424 LQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKMA-KRDILVWNSM 480
Query: 139 LEKYAQ 144
L YAQ
Sbjct: 481 LGAYAQ 486
>gi|358357246|gb|AEU08463.1| pentatricopeptide repeat protein [Pogonatum urnigerum]
Length = 152
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 61/86 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + K AGY+P T+ VL D+D++ KE+ SE+LA+AYGLISTPPG +R+ KNLR
Sbjct: 58 RLTQEMKKAGYVPDTQIVLHDVDKQQKEEALCSHSEKLAIAYGLISTPPGTPIRVFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+C +CH K +S + REI+ RD +
Sbjct: 118 VCSDCHAATKFISMVTGREIVARDGS 143
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 133/275 (48%), Gaps = 51/275 (18%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
A+ + +++K G+ + I LL+ C L+E G+++ ++ G+ P + ++
Sbjct: 296 AVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMV 355
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTL-EHFLGIVDLYGRLQKIAEA--REFIRNMQI 129
G V E + E + + NP + + ++G L K+ E+ ++ IRN +
Sbjct: 356 DLLSRAGLVTEALEFVERMP--IEPNPIIWRTLISACRVHGEL-KLGESISKQLIRNEPM 412
Query: 130 DASSVV-----------WETLEKY--------AQTEPG------------LLLGEPSSS- 157
S+ V WE K Q PG ++G+ S +
Sbjct: 413 HESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQ 472
Query: 158 ----LRLSNKK----KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
+++ N+ K AGY P T V D+D+E KE + SE+LA+A+ L++TPPG
Sbjct: 473 YNEIIKMVNEMGREMKRAGYAPTTTEVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGS 532
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
+RI KNLR+CG+CH+ K +S I NREI++RD++
Sbjct: 533 PIRITKNLRVCGDCHSASKFISKIYNREIVMRDRS 567
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 26 KNIGIF--LDSPDIIELLNVCMDLKL----LEAGKRFEN---DGVRPNWSTFVGVITACG 76
K +G+F + I+ +V + L + LEA FE G+ P F+G+++AC
Sbjct: 264 KALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACS 323
Query: 77 CFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVW 136
G V+ G Q+F +TR + I P +EH+ +VDL R + EA EF+ M I+ + ++W
Sbjct: 324 HSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIW 383
Query: 137 ETLEKYAQTEPGLLLGEPSSSLRLSNKK-KDAGYMPYTEYVLRDLDQEAKEKPQTYRSER 195
TL + L LGE S + N+ ++ Y+ + + LD E K K R
Sbjct: 384 RTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKI------R 437
Query: 196 LAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
+A+ I PG T+ + + E H FI
Sbjct: 438 VAMGKKGIQKVPGSTM-----IELDNEIHEFI 464
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
+I+LL C K EA E V P + ++ C G +D G Q E R ++
Sbjct: 570 MIDLL--CRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAE---RLFE 624
Query: 97 INPTLE-HFLGIVDLY---GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLL 151
+ P + ++ + ++Y GR +A+ R+ +R+ + W +E +
Sbjct: 625 LMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDI 684
Query: 152 GEPSSSL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIST 205
P L K + GY+P T++VL D++ E KE + SE+LAV +GL+
Sbjct: 685 VHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKL 744
Query: 206 PPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
P G T+R+ KNLRICG+CHN K +S + REI+VRD
Sbjct: 745 PLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRD 781
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+ P+ TF+ V++ C G V+EG ++F+S++ Y I P +H+ ++DL R K +EA
Sbjct: 524 ILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEA 583
Query: 121 REFIRNMQIDASSVVWETL 139
++ I M ++ +WE L
Sbjct: 584 KDMIETMPVEPGPPIWEAL 602
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 59/86 (68%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL K GY+P ++ L D++ K + SE+LA+A+GLIST PG TLRI KNLR
Sbjct: 509 RLQMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLR 568
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
ICG+CHN K +S IE+REII+RD T
Sbjct: 569 ICGDCHNAAKLISKIEDREIILRDTT 594
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 4/212 (1%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
S L C+ ++ A +V D++ I + I ++ ++ ++ +++GV
Sbjct: 277 TSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVV 336
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
P+W T + V+TAC G D G Q FE++ Y I P ++H+ +VDL R + A
Sbjct: 337 PDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVN 396
Query: 123 FIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQ 182
I +M + + TL + L E ++ + ++AG Y + L ++
Sbjct: 397 MIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAG--AYVQ--LANIYA 452
Query: 183 EAKEKPQTYRSERLAVAYGLISTPPGRTLRIK 214
A + R R ++ TP + IK
Sbjct: 453 VANKWADVSRVRRWMKDNAVVKTPGYSWMEIK 484
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 121/246 (49%), Gaps = 26/246 (10%)
Query: 15 VKAALEVMDKLKNIGIFLDSPD----IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVG 70
V LE +K + + D +I+LL K EA +N V+P+ +
Sbjct: 438 VDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFK--EAENIIDNMPVKPDKFLWAS 495
Query: 71 VITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFLGIVDLY---GRLQKIAEAREFIRN 126
++ C G ++ + +++ Y+I P ++ + ++Y G ++A R+ + N
Sbjct: 496 LLGGCRIHGNLELAKRAAKAL---YEIEPENPATYITLANIYANAGLWSEVANVRKDMDN 552
Query: 127 MQI-DASSVVWETLEKYAQTEPGLLLGEPSSSL---------RLSNKKKDAGYMPYTEYV 176
M I W +++ L+G+ S LS K K+ GY+P T +V
Sbjct: 553 MGIVKKPGKSWIEIKRQVHV---FLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFV 609
Query: 177 LRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENR 236
L D+++E KE+ Y SE+LAV +G+ISTPPG +++ KNLR C +CH IK +S I R
Sbjct: 610 LHDVEEEQKEQNLVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQR 669
Query: 237 EIIVRD 242
+I VRD
Sbjct: 670 KITVRD 675
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G +P+ T+VGV++AC G VD+G ++F S+ + + T +H+ ++DL R + E
Sbjct: 417 GTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKE 476
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE-------------PSSSLRLSNKKKD 166
A I NM + +W +L + L L + P++ + L+N +
Sbjct: 477 AENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYAN 536
Query: 167 AGYMPYTEYVLRDLD 181
AG V +D+D
Sbjct: 537 AGLWSEVANVRKDMD 551
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 126/270 (46%), Gaps = 45/270 (16%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
++E+ ++++ +G D I +L VC L+E G ++ N+ G+ P + V+
Sbjct: 523 SIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVM 582
Query: 73 TACGCFGAVDEG---------------FQHFESVTRDY--------------DINP-TLE 102
G G +D+ + S R++ ++ P +E
Sbjct: 583 DMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVE 642
Query: 103 HFLGIVDLY---GRLQKIAEAREFIRN--MQIDASSVVWETLEKYAQTEPGLLLGEPSSS 157
+++ + +LY GR + R+ I++ +Q DA E K G L S
Sbjct: 643 NYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKE 702
Query: 158 LRLSNKKKDA-----GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
+ ++ +K + GY P T VL D+D+E K + SE+LA+ +GL++T G TLR
Sbjct: 703 MSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLR 762
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRD 242
I KNLRIC +CHN K +S + REII+RD
Sbjct: 763 IFKNLRICVDCHNASKFMSEVTGREIIIRD 792
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 24/151 (15%)
Query: 15 VKAALEVMDKLKN------------IGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
+K + V D LKN G+ D + IEL +R G
Sbjct: 489 IKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELF------------ERMRKVGQM 536
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
P+ TF+G++T C G V+EG ++F + + I P LEH+ ++D+ GR ++ +A
Sbjct: 537 PDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALR 596
Query: 123 FIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
+ M S VW +L + + L +G+
Sbjct: 597 LVHEMPEQPDSRVWSSLLSFCRNFGELEIGQ 627
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 124/275 (45%), Gaps = 57/275 (20%)
Query: 19 LEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVIT 73
L++ +++K GI D + LL+ C LLE G+R+ + G+ P + ++
Sbjct: 734 LQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVD 793
Query: 74 ACGCFGAVDE-----GFQHFESVTRDYDINPTLEHFLGIVDLYGRL---QKIAE------ 119
G G +DE F++ TR + LG ++G + ++ AE
Sbjct: 794 LLGRAGQLDEVEALIKTMPFQANTRIWGA------LLGACRIHGNVPVAERAAESSLKLD 847
Query: 120 ---AREFIRNMQIDASSVVWETLEKY--------AQTEPGLLLGEPSSSL---------- 158
A ++ + A++ +W++ K EPG E L
Sbjct: 848 PDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSH 907
Query: 159 -----------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPP 207
+L++ K GY+P T V+ D+D+ KE + SERLA+AYGLIST P
Sbjct: 908 PESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLP 967
Query: 208 GRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
G +RI KNLR+C +CH K ++ I +REI+ RD
Sbjct: 968 GTPIRIFKNLRVCPDCHTATKFITKIVDREIVARD 1002
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 69/114 (60%), Gaps = 2/114 (1%)
Query: 49 LLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIV 108
+L+ +R + +G++P+ TFV +++AC G ++EG ++F S++RD+ I PT+EH+ +V
Sbjct: 733 VLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMV 792
Query: 109 DLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPS--SSLRL 160
DL GR ++ E I+ M A++ +W L + + + E + SSL+L
Sbjct: 793 DLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKL 846
>gi|190612773|gb|ACE80764.1| pentatricopeptide repeat protein [Porella platyphylla]
gi|358357142|gb|AEU08411.1| pentatricopeptide repeat protein [Porella platyphylla]
Length = 153
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 58/80 (72%)
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
+AGY P T +VL D+D+E K+ + SE+LA+A+GLISTPPG LRI KNLR+CG+CH
Sbjct: 66 EAGYEPDTRFVLHDVDEEEKKVHLGHHSEKLAIAFGLISTPPGTPLRIFKNLRVCGDCHT 125
Query: 226 FIKKLSSIENREIIVRDKTT 245
K ++ I REIIVRD +
Sbjct: 126 ATKFIAKIVGREIIVRDANS 145
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 104/189 (55%), Gaps = 17/189 (8%)
Query: 65 WSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH-FLGIVDLY---GRLQKIAEA 120
W F+G AC + +D E++ + ++P ++ + ++Y GR +A
Sbjct: 437 WMAFLG---ACRTYRNMDRAIWAAENL---FQLDPRKRAPYVLLSNMYAKAGRWSDVARM 490
Query: 121 REFIR-NMQIDASSVVW-ETLEKYAQTEPGLL----LGEPSSSL-RLSNKKKDAGYMPYT 173
R+ ++ M + + W E ++ + G L +GE + L RL+ K+AGY+P T
Sbjct: 491 RQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKEAGYVPDT 550
Query: 174 EYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSI 233
E VL D+ QE KE Y SE+LA+A+ L++TP G +R+ KNLR+C +CH K +S +
Sbjct: 551 EMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKL 610
Query: 234 ENREIIVRD 242
NREI+VRD
Sbjct: 611 VNREIVVRD 619
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGC 77
A ++ DK+ ++ + L + I K LE +R +G++P TF V+ AC
Sbjct: 319 AGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSH 378
Query: 78 FGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVW 136
G +D+G +HF S D+ I P EHF +VDL GR I ++ + + +M + V W
Sbjct: 379 AGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAW 437
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 107/211 (50%), Gaps = 26/211 (12%)
Query: 51 EAGKRFENDGVRPN---WSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTL-EHFL 105
A K + + PN W T +G AC G D G E ++R ++P+ E+++
Sbjct: 363 HAHKFIQTMPIEPNVVLWRTLLG---ACKTHGYKDLG----EHISRKILKLDPSSPENYV 415
Query: 106 GIVDLY---GRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLR--- 159
+ ++Y GR + + R +++ + W ++E ++G+ S R
Sbjct: 416 LVSNVYASLGRWSSVCQVRSLMKD-KAPKKQHGWSSIEINFMVHK-FIMGDESHPEREKI 473
Query: 160 ------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
++ K K G++ T VL D+D+E KE SERLA+AYGL+ TP G +RI
Sbjct: 474 YGMLHQMARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRI 533
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRDKT 244
KNLR+C +CH IK +S + NREIIVRD+
Sbjct: 534 VKNLRVCRDCHEVIKLISEVYNREIIVRDRV 564
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
L+L +A KR + PN TF V++AC G V++G Q FE++ +Y I P ++H+
Sbjct: 294 LQLFDAMKRSKT---IPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGC 350
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
+VDL+ R + A +FI+ M I+ + V+W TL +T LGE S
Sbjct: 351 MVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHIS 400
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 128/287 (44%), Gaps = 50/287 (17%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG-----KRFE 57
N+ + R K AL + + +K + I D ++ +L+ C L++ G ++
Sbjct: 475 NTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQ 533
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
N G+ N + +I G G +DE +S+ Y T LG ++G +
Sbjct: 534 NYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPF-YPDAATWGALLGASRIHGDTELG 592
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLR--------------LSNK 163
+A E + M+ D S + YA + + E S +R + NK
Sbjct: 593 EKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNK 652
Query: 164 ----------------------------KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSER 195
KKD G++ T+ VL D+++E KE Y SE+
Sbjct: 653 THIFTVGDCSHPEAERIYAYLEELDLELKKD-GFVSSTKLVLHDVEEEEKEHMLKYHSEK 711
Query: 196 LAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
LAVA+G++S PPGR +R+ KNLR+C +CHN IK +S I R+IIVRD
Sbjct: 712 LAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRD 758
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K GY+P TE+VL D+D+E KE Y SE+LAVAY L++TP G ++I KNLRICG+CH
Sbjct: 827 KATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCH 886
Query: 225 NFIKKLSSIENREIIVRD 242
FIK +S + R+I +RD
Sbjct: 887 TFIKFVSHVTKRQIDIRD 904
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+ E+ GV PN TFVG++ AC G VDEG++ F+S+++DY + P EH+ +VDL GR
Sbjct: 640 QHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGR 699
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
+ A +FI +M I+ +V+W L
Sbjct: 700 TGDVQGAEQFIYDMPIEPDTVIWSAL 725
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 59/86 (68%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL K GY P ++ L D+++ K + SE+LA+A+GLIST PG TLRI KNLR
Sbjct: 504 RLGKLMKAMGYSPDLDFALHDVEESLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLR 563
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
ICG+CHN K +S IE+REII+RD T
Sbjct: 564 ICGDCHNAAKLISKIEDREIILRDTT 589
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
+KL E + +++GV P+W T + V+TAC G D G Q FE++ Y+I P ++H+
Sbjct: 319 IKLFE---KMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSC 375
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD 166
+VDL R + A I +M + + TL + L E ++ + ++
Sbjct: 376 MVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQN 435
Query: 167 AGYMPYTEYV-LRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIK 214
AG YV L ++ A R R ++ TP + IK
Sbjct: 436 AG-----AYVQLANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIK 479
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K GY+P TE+VL D+D+E KE Y SE+LAVAY L++TP G ++I KNLRICG+CH
Sbjct: 827 KATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCH 886
Query: 225 NFIKKLSSIENREIIVRD 242
FIK +S + R+I +RD
Sbjct: 887 TFIKFVSHVTKRQIDIRD 904
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+ E+ GV PN TFVG++ AC G VDEG++ F+S+++DY + P EH+ +VDL GR
Sbjct: 640 QHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGR 699
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
+ A +FI +M I+ +V+W L
Sbjct: 700 TGDVQGAEQFIYDMPIEPDTVIWSAL 725
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + K+AGY T+ VL+D++++ KE Y SE+LA+A+GLISTPPG LRI KNLR
Sbjct: 551 RLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKNLR 610
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S + REI+VRD
Sbjct: 611 VCSDCHAATKVISKVTGREILVRD 634
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
+E R ++G P+ F+ V+ AC G V+ F S+ D + PTLEH+ +VD
Sbjct: 366 MELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVD 425
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+ GR K+ +A + +R M +++ T+
Sbjct: 426 VLGRAGKLRDAEDLLRLMPFHPGPLLYMTM 455
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + ++AGY P T++VL DL + +E SERLA+AYGLI TPPG +RI KNLR
Sbjct: 1005 RLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLR 1064
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
ICG+CH K +S + REII RD
Sbjct: 1065 ICGDCHTASKFISKLVGREIIARD 1088
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
E +G++P+ STF +++AC G V EG+Q F S+ +Y + PT+EH+ +V L GR +
Sbjct: 826 MEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRAR 885
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS-NKKKDAGYM 170
+ EA I M + VWETL + + L E +++ L N + A Y+
Sbjct: 886 RFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYI 941
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGC 77
A EV DK+ + I + I + +E + + V PN +FV ++ AC
Sbjct: 687 AREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSS 746
Query: 78 FGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVW 136
F A++EG + H E V R + + ++ +Y + EA+E N+ I+ + V W
Sbjct: 747 FSALEEGKRVHAEIVKR--KLQGDVRVGAALISMYAKCGSQGEAQEVFDNI-IEKNVVTW 803
Query: 137 ETL-EKYAQ 144
+ YAQ
Sbjct: 804 NAMINAYAQ 812
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 101/203 (49%), Gaps = 8/203 (3%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG- 106
KL EA + P S + IT C G D + V ++ L L
Sbjct: 407 KLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSN 466
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDA-SSVVW----ETLEKYAQTEP-GLLLGEPSSSLR- 159
GR + A+AR+ +R+ + + + W + K+A + + + E L
Sbjct: 467 AYAAAGRYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLED 526
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + + AGY+ T +VLR++ E K + Y SERLA+A+GLIS P GR +RI KNLR+
Sbjct: 527 LGEEMERAGYVADTSFVLREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRV 586
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN IK +S + R IIVRD
Sbjct: 587 CGDCHNAIKFISKLSGRVIIVRD 609
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 15 VKAALEVMDK--LKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVI 72
++ A V D+ +KN+G++ + +I + + + EN G+RPN+ TF+ V+
Sbjct: 307 IEGAYRVFDEVPIKNLGMW--NAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVL 364
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDAS 132
AC G V+EG ++F ++ + Y+I P +H+ +VDL GR K+ EA I+ M + +
Sbjct: 365 YACSHAGLVEEGKKYF-ALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPT 423
Query: 133 SVVW 136
VW
Sbjct: 424 ESVW 427
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 61/85 (71%)
Query: 158 LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
++LSN+ K GY+P T VL DLD+E KE+ SE+LAVA+GLI+T G T+RI+KNL
Sbjct: 556 VKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNL 615
Query: 218 RICGECHNFIKKLSSIENREIIVRD 242
R+C +CH K +S NREI+VRD
Sbjct: 616 RLCEDCHAVTKFISKFANREILVRD 640
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+A + FEN GV P++ +F+ V+ AC G V+EG FES+ Y I+P +EH+ +
Sbjct: 370 KAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACM 429
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VDL GR ++ EA + I +M + VW +L + + L E +S++ + ++A
Sbjct: 430 VDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNA 489
Query: 168 GYMPYTEYV-LRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
G YV L D+ EAK + +L A GL P + +K+ +
Sbjct: 490 G-----NYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKV 535
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 62/83 (74%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS + K+ GY+P T +VL D++ E KE+ +Y SE+LAVA+G+ISTP G +++ KNLR
Sbjct: 624 LSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAFGIISTPSGTPIKVFKNLRT 683
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CHN IK +S+I R+IIVRD
Sbjct: 684 CVDCHNAIKFISNITGRKIIVRD 706
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G +P+ F+GV++AC G VD+G ++F S+ + + T++H+ I+DL R + E
Sbjct: 448 GTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTE 507
Query: 120 AREFIRNMQIDASSVVWETL 139
A I M I +W L
Sbjct: 508 AESIINEMPIKPDKYIWAAL 527
>gi|144923519|gb|ABP02617.1| Ankyrin; Pentatricopeptide repeat [Medicago truncatula]
Length = 293
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 80/279 (28%)
Query: 40 LLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP 99
+L VCM L L N + +T VGV+ AC G D G ++F S+++DY I P
Sbjct: 1 MLWVCMYLDFLIFVLYLSNTEL----ATGVGVLLACSHTGLTDRGTEYFYSMSKDYGITP 56
Query: 100 TLEHF-----------------------------------LGIVDLYGRLQKIAEAREFI 124
+H+ LG ++G + +A E +
Sbjct: 57 NSKHYNCMIDLLGRAGLLEEAHNLMRNMPFEPDAATWGALLGASRIHGNAELGEKAAEMV 116
Query: 125 RNMQIDASSV------VWETLEKYA--------------QTEPGLLLGEPSSSLR----- 159
NM+ + + + ++ TL K+ Q PG E + +
Sbjct: 117 FNMEPNNAGMYVLLSNLYATLGKWVDVGKLRLKMRQLGIQKIPGYSWVEVQNKIHKFTVG 176
Query: 160 ----------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLI 203
+ K K G++ + VL D+++E K++ Y SE+LAVA+G++
Sbjct: 177 DCFHPEKDRIYAYLEEIDLKMKHEGHVSLVKLVLHDVEEEEKKRMLKYHSEKLAVAFGIL 236
Query: 204 STPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+ P GR +R+ KNLR+C +CHN IK +S I R II+RD
Sbjct: 237 TIPAGRPIRVMKNLRVCEDCHNVIKYISKIVGRLIILRD 275
>gi|190612853|gb|ACE80804.1| pentatricopeptide repeat protein [Cycas revoluta]
Length = 152
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 61/84 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K+ GY+P T +VL D+++E KE Y SE+LA+A+GL++T P +RI KNLR
Sbjct: 58 RLSGQMKEGGYLPNTNFVLHDVEEEQKEHILCYHSEKLAIAFGLLNTSPNTPVRIVKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH+ K +S I REI+VRD
Sbjct: 118 VCGDCHSATKFISKIVAREIVVRD 141
>gi|296080850|emb|CBI18780.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 23/195 (11%)
Query: 63 PNWSTFVGVITACGCFGAVDEG-FQHFESVTRDY-DINPTLEHFLGIVDLYGRLQKIAEA 120
P+++ + ++ C G V++G H V + D + L++ IV++Y + + +A
Sbjct: 85 PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNI--IVNMYAKCGCLDDA 142
Query: 121 REFIRNMQI-DASSVVWETL-EKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMP------- 171
R M D S V W L +A+ GE +L L K + + P
Sbjct: 143 RRMFDEMPTKDMSEVSWNALISGHARK------GEGEHALHLLWKMQRKNFQPTHFTYSS 196
Query: 172 ----YTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
YT +VL +DQ+ +E+ Y SE+LA+A+ L++TP G +RIKKN+R+CG+CH I
Sbjct: 197 VLSAYTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAI 256
Query: 228 KKLSSIENREIIVRD 242
K +S + +REIIVRD
Sbjct: 257 KFVSKVVDREIIVRD 271
>gi|358357194|gb|AEU08437.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K+AGY+P +VL D+++E KE + SE+LA+A+GLIST PG LR+ KNLR
Sbjct: 58 RLSGQMKEAGYVPDLRFVLHDVEEEQKEFSLYHHSEKLAIAFGLISTAPGTPLRVIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I R I+VRD
Sbjct: 118 VCGDCHTATKFISKIVGRAIVVRD 141
>gi|294461906|gb|ADE76509.1| unknown [Picea sitchensis]
Length = 246
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 101/191 (52%), Gaps = 14/191 (7%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFLGIVDLY---GRLQKIA 118
P+ + + ++ AC +G +D G E + + + P ++ + ++Y GR +A
Sbjct: 41 PDANVWGALLGACRMYGNIDLGKHAAECL---FQLEPHNAAKYVLLSNIYAAAGRWDDVA 97
Query: 119 EAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEP------SSSLRLSNKKKDAGYMP 171
+ R+ +++ + W ++ T P S+ L+ + + AGY+P
Sbjct: 98 KVRKIMKDRGVQKQPGCSWIEVKNKVHTFMVEDKSHPQTEEIYSTLEELARQMEAAGYVP 157
Query: 172 YTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLS 231
T +VL D++ E KE + SE+LA+A+GLIST PG +RI KNLR+CG+CH K +S
Sbjct: 158 DTNFVLHDVEMEQKEHSLYHHSEKLAIAFGLISTLPGLPVRIIKNLRVCGDCHTATKFIS 217
Query: 232 SIENREIIVRD 242
I REII+RD
Sbjct: 218 KIVEREIIIRD 228
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 91 VTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLL 150
+ RDY I P H+ ++DL GR ++ EAR+F++ + + VW L + +
Sbjct: 1 MCRDYCIAPREVHYACMIDLLGRAGRLDEARDFMKTIPFAPDANVWGALLGACRMYGNID 60
Query: 151 LGEPSS 156
LG+ ++
Sbjct: 61 LGKHAA 66
>gi|302812506|ref|XP_002987940.1| hypothetical protein SELMODRAFT_25177 [Selaginella moellendorffii]
gi|300144329|gb|EFJ11014.1| hypothetical protein SELMODRAFT_25177 [Selaginella moellendorffii]
Length = 312
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 102/191 (53%), Gaps = 20/191 (10%)
Query: 65 WSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPT-LEHFLGIVDLY---GRLQKIAEA 120
W + VG AC +G + G + + R ++NP + ++ + ++Y GR A
Sbjct: 111 WMSLVG---ACRNYGDWERGRR---AAQRVMELNPAYVGAYILMSNMYAAQGRWDDAAGV 164
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLL--LGEPSSSL------RLSNKKKDAGYMPY 172
RE + + A W ++E + P S RL+ KDAGY+P
Sbjct: 165 RELMARRGL-AKEAGWSSIEVRNKVHVFTAKDCSHPKSEAIYAELHRLALLLKDAGYVPN 223
Query: 173 TEYVLRDLDQEAKEKPQTYRSERLAVAYGLIS-TPPGRTLRIKKNLRICGECHNFIKKLS 231
T VL+D+++E KE+ SE+LA+A+G++S T P TLRI KNLR+CG+CHN K LS
Sbjct: 224 TSLVLQDVEEELKEQLLFCHSEKLAIAFGVVSSTKPRSTLRIIKNLRMCGDCHNAFKLLS 283
Query: 232 SIENREIIVRD 242
SI REI+VRD
Sbjct: 284 SILEREIVVRD 294
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 50/257 (19%)
Query: 35 PDIIE---LLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVITACGCFGAVDEGFQ 86
PD++ LL C L E G+ + + GV P + ++T G G +DE +
Sbjct: 392 PDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYD 451
Query: 87 HFESVTRDYDINPTLEHFLGIVDLYGR--LQKIA----------EAREFIRNMQIDASSV 134
+ + D LG ++G L ++A A ++ I AS
Sbjct: 452 LISDMPFEPDAY-IWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKK 510
Query: 135 VWETLEKYAQT--------EPG------------LLLGEPSSSL---------RLSNKKK 165
+W+ + + + E G LL G+ S + +L+ + +
Sbjct: 511 MWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMR 570
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
G++P T++VL D++++ K+ SE+LAVA GLIST PG TLR+ KNLRICG+CH
Sbjct: 571 KLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSPGTTLRVIKNLRICGDCHE 630
Query: 226 FIKKLSSIENREIIVRD 242
+K +SS E REI VRD
Sbjct: 631 AMKFISSFEGREISVRD 647
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%)
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
+P+ TF ++ AC G +EG +F+ + +Y ++P +EH+ +V L GR K+ EA
Sbjct: 391 KPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAY 450
Query: 122 EFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
+ I +M + + +W +L + + L E ++ + ++AG
Sbjct: 451 DLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAG 497
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 61/85 (71%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K K AGY+P E+VL D+ +E KE+ + SE+LA+A+GL+ P G +R+ KNLR+
Sbjct: 535 LEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRV 594
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CH+ K +S+IE REIIVRD T
Sbjct: 595 CGDCHSATKYISTIEGREIIVRDTT 619
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L + +G++P+W TFV V+ AC G VD G Q+F ++ RD+ I EH+ +
Sbjct: 347 KALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACM 406
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
VDL GR K++EA + I++M ++ TL + L L E
Sbjct: 407 VDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAE 452
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + ++AGY P T++VL DL + +E SERLA+AYGLI TPPG +RI KNLR
Sbjct: 804 RLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLR 863
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
ICG+CH K +S + REII RD
Sbjct: 864 ICGDCHTASKFISKLVGREIIARD 887
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Query: 46 DLKLLEAGKRFENDGVRP-NWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF 104
D+K +E + +N+G RP + STF +++AC G V EG+Q F S+ +Y + PT+EH+
Sbjct: 614 DMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHY 673
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS-NK 163
+V L GR ++ EA I M + VWETL + + L E +++ L N
Sbjct: 674 GCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNA 733
Query: 164 KKDAGYM 170
+ A Y+
Sbjct: 734 RNPAVYI 740
>gi|449485419|ref|XP_004157162.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g25580-like [Cucumis sativus]
Length = 731
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 125/261 (47%), Gaps = 36/261 (13%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVC-----MDLKLLEAGKRFENDGVRPNWSTFVGVI 72
A+++ + K G+ D I + + C D +L +N G+ P+ +V ++
Sbjct: 453 AIDLFYEFKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIV 512
Query: 73 TACGCFGAVDEGFQHFESVTRD--YDINPTLEHF---LGIVDLYGRLQKIAEAREFIR-N 126
G G VDE + E + + DI T+ + G+++L R ++ E + R N
Sbjct: 513 DMLGSIGFVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLN 572
Query: 127 MQIDAS--SVVWETLEKYAQTEP----GLL----------LGEPSSS--------LR-LS 161
Q A V L K + E LL G+ S LR L
Sbjct: 573 EQSKAGLLPVKASDLXKREREEKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLR 632
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+ K+AGY+P T +VL D+DQEAK SERLAVAYGLIS+ +R+ KNLR+CG
Sbjct: 633 EQMKEAGYIPETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCG 692
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH+ +K +S I RE+I+RD
Sbjct: 693 DCHSALKIISKIVGRELIIRD 713
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 103/189 (54%), Gaps = 17/189 (8%)
Query: 65 WSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH-FLGIVDLY---GRLQKIAEA 120
W F+G AC + +D E++ + ++P ++ + ++Y GR +A
Sbjct: 452 WMAFLG---ACRTYRNMDGAIWAAENL---FQLDPRKRAPYVLLSNMYAKAGRWSDVARM 505
Query: 121 REFIR-NMQIDASSVVW-ETLEKYAQTEPGLL----LGEPSSSL-RLSNKKKDAGYMPYT 173
R+ ++ M + + W E ++ + G L +GE + L RL+ K AGY+P T
Sbjct: 506 RQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKAAGYVPDT 565
Query: 174 EYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSI 233
E VL D+ QE KE Y SE+LA+A+ L++TP G +R+ KNLR+C +CH K +S +
Sbjct: 566 EMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKL 625
Query: 234 ENREIIVRD 242
NREI+VRD
Sbjct: 626 VNREIVVRD 634
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K LE +R +G++P TF V+ AC G +D+G +HF S D+ I P EHF +
Sbjct: 364 KALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCM 423
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVW 136
VDL GR I ++ + + +M + V W
Sbjct: 424 VDLLGRAGWIVDSEDLLLHMPFEPHPVAW 452
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 48/273 (17%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
KAA+E+ +++K+IGI + + +L+ C L++ G+ + E+ G+ P +
Sbjct: 446 KAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGT 505
Query: 71 VITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNM--- 127
++ G G +DE + + + D ++ LG L+ ++ E+ + I +
Sbjct: 506 MVDLLGRAGKLDEAWAFIQKMPMDPGLS-VYGAMLGACKLHKNVELAEESAQKIFELGPQ 564
Query: 128 ---------QIDASSVVWE-------TLEKYA-QTEPGLLLGEPSSSL------------ 158
I A++ +W+ +EK Q PG + + + +
Sbjct: 565 EGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQ 624
Query: 159 ---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
+L + K GY+P T+ + D++ + K + SE+LA+A+GLI T PG
Sbjct: 625 AKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGT 683
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
T++IKKNLR+C +CHN K +S + REII+RD
Sbjct: 684 TIQIKKNLRVCNDCHNATKLISLVTGREIIMRD 716
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 114/273 (41%), Gaps = 78/273 (28%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESV-TRDYDINPTLEHFLGIV 108
+EA G+ P T G+++AC G VDEG F+ + + ++ I P L H+ IV
Sbjct: 303 IEAFNEMLKFGISPEEQTLTGLLSACSHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIV 362
Query: 109 DLYGRLQ-----------------------------------------------KIAEAR 121
DL GR + K EA
Sbjct: 363 DLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGNVELGERVIAHLIEFKAEEAG 422
Query: 122 EFIRNMQIDASSVVWETL--------EKYAQTEPGLLLGEPSSSLR-------------- 159
+++ + +S WE + +K QT PG E ++
Sbjct: 423 DYVLLLNTYSSVGKWEKVTELRSLMKKKRIQTNPGCSAIELQGTVHEFIVDDVSHPRKEE 482
Query: 160 -------LSNKKKDAGYMPYTEYVLRDLD-QEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
++ + K AGY+ L +LD +E K Y SE+LA+A+G++ TPP T+
Sbjct: 483 IYKMLAEINQQLKIAGYVAEITSELHNLDSEEEKGYALRYHSEKLAIAFGILVTPPETTI 542
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
R+ KNLR C +CHNF K +S + +R +IVRD++
Sbjct: 543 RVTKNLRTCVDCHNFAKFVSDVYDRVVIVRDRS 575
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 61/85 (71%)
Query: 158 LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
++LSN+ K GY+P T VL DLD+E KE+ SE+LAVA+GLI+T G T+RI+KNL
Sbjct: 556 VKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNL 615
Query: 218 RICGECHNFIKKLSSIENREIIVRD 242
R+C +CH K +S NREI+VRD
Sbjct: 616 RLCEDCHAVTKFISKFANREILVRD 640
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR----FE 57
LN+ + R E+ V D +KN D++ ++ + GK+ FE
Sbjct: 324 LNALITMYGRCGEILMGQRVFDNMKN-------RDVVSWNSLISIYGMHGFGKKAIQIFE 376
Query: 58 N---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
N G P++ +F+ V+ AC G V+EG FES+ Y I+P +EH+ +VDL GR
Sbjct: 377 NMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRA 436
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTE 174
++ EA + I +M + VW +L + + L E +S+L + ++AG
Sbjct: 437 NRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAG-----N 491
Query: 175 YV-LRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
YV L D+ EAK + +L A GL P + +K+ +
Sbjct: 492 YVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKV 535
>gi|218186279|gb|EEC68706.1| hypothetical protein OsI_37186 [Oryza sativa Indica Group]
Length = 416
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 122/269 (45%), Gaps = 68/269 (25%)
Query: 28 IGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQH 87
I ++D+ D+ E ++V A F N G+RP+ T V V+TAC + G
Sbjct: 144 ITAYMDAGDLREAVHV--------ARNAFAN-GMRPDSFTAVRVLTACARVADLATG--- 191
Query: 88 FESVTRDYD---INPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVW-------- 136
E+V R + I ++ VDLY + ++A+ARE M+ D +V W
Sbjct: 192 -ETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMR-DKDAVAWGAMVGGYA 249
Query: 137 ------ETLEKY-AQTEPGL------LLGEPSSSLRLSN--------------------- 162
E L+ + A G+ + G S+ RL
Sbjct: 250 SNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPI 309
Query: 163 ---------KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
+ K GY P TE V+ D++ E KE + SE+LA+A+ L+ T PG T+R+
Sbjct: 310 YKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRV 369
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRD 242
KNLR+C +CH IK +S I +REIIVRD
Sbjct: 370 TKNLRVCSDCHTAIKLISRITHREIIVRD 398
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L + K GY+P TE+VL +L++E KE+ SERLA+A+GL++T PG L I KNLR
Sbjct: 577 KLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLR 636
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I NREI+VRD
Sbjct: 637 VCGDCHEATKFISKIVNREIVVRD 660
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+P+ +TF +++A G V++G F + +Y I P+ +H+ +VDL R ++ EA
Sbjct: 403 VKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEA 462
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
+E I +M + +W L L+GE ++ L D G
Sbjct: 463 QELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPG 510
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 48/273 (17%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
KAA+E+ +++K+IGI + + +L+ C L++ G+ + E+ G+ P +
Sbjct: 446 KAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGT 505
Query: 71 VITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNM--- 127
++ G G +DE + + + D ++ LG L+ ++ E+ + I +
Sbjct: 506 MVDLLGRAGKLDEAWAFIQKMPMDPGLS-VYGAMLGACKLHKNVELAEESAQKIFELGPQ 564
Query: 128 ---------QIDASSVVWE-------TLEKYA-QTEPGLLLGEPSSSL------------ 158
I A++ +W+ +EK Q PG + + + +
Sbjct: 565 EGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQ 624
Query: 159 ---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
+L + K GY+P T+ + D++ + K + SE+LA+A+GLI T PG
Sbjct: 625 AKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGT 683
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
T++IKKNLR+C +CHN K +S + REII+RD
Sbjct: 684 TIQIKKNLRVCNDCHNATKLISLVTGREIIMRD 716
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 6/205 (2%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
++ A +V D+++ + + I+ L + LE K E G+ P+ TFVGV+ A
Sbjct: 292 IRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYA 351
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G VDEGF +F+ + +Y I P +EH+ +VDL GR + +A EFI+NM + ++V
Sbjct: 352 CSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAV 411
Query: 135 VWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYV-LRDLDQEAKEKPQTYRS 193
VW TL L LGE + + L + K +G +YV L +L + ++
Sbjct: 412 VWRTLLGACTIHGHLALGEVARAQLLQLEPKHSG-----DYVLLSNLYASEQRWSDVHKV 466
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLR 218
R + G+ TP + ++ L
Sbjct: 467 RRTMLREGVKKTPGHSLVELRNRLH 491
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+P+ VL D+++E KE +Y SE++A+A+ LI+T G +R+ KNLR+C +CH I
Sbjct: 521 GYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAI 580
Query: 228 KKLSSIENREIIVRDKT 244
K +S + +REI+VRD++
Sbjct: 581 KLISKVFDREIVVRDRS 597
>gi|225432322|ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Vitis vinifera]
Length = 606
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 114/262 (43%), Gaps = 80/262 (30%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD----------- 109
++PN TFVGV+ AC G VD+G ++ S+ + + + P +H+ +VD
Sbjct: 327 IKPNDVTFVGVLHACSHSGLVDDGLEYLHSMHKKHGVVPDTKHYTCVVDMLGRTGRLDEA 386
Query: 110 --------------------------LYGRLQKIAEAREFI--RNMQIDASSVV------ 135
LYGR+ EA +++ N Q+ A+ V
Sbjct: 387 HQLAKSIQVEPDQGALLWGTLLSASRLYGRVDIAVEASKWLIESNQQVAAAYVTMSNTYA 446
Query: 136 ----WETLEKY--------AQTEPGLLL---------------------GEPSSSLR-LS 161
WE + EPG E +S LR L
Sbjct: 447 MAGKWENVHSIRYEMKHYGVYKEPGCSWVEIRDSAYVFYAGDVSLCARGSEVASLLRELE 506
Query: 162 NKKKDAGYMPYTEYVLR-DLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRIC 220
+ K+ GY+ + ++ D+++EAKE+ SERLA+A+GLIS P G T+R+ KNLR+C
Sbjct: 507 RRMKERGYVGGSRGLVSIDVEEEAKEEIVGLHSERLALAFGLISIPKGVTIRVMKNLRMC 566
Query: 221 GECHNFIKKLSSIENREIIVRD 242
+CH K +S I R+ +VRD
Sbjct: 567 RDCHEAFKLISEIVERDFVVRD 588
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + K+AGY T+ VL+D++++ KE Y SE+LA+A+GLISTPPG LRI KNLR
Sbjct: 384 RLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKNLR 443
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S + REI+VRD
Sbjct: 444 VCSDCHAATKVISKVTGREILVRD 467
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
+E R ++G P+ F+ V+ AC G V+ F S+ D + PTLEH+ +VD
Sbjct: 199 MELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVD 258
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
+ GR K+ +A + +R M +++ T+ + + GE ++ + +++
Sbjct: 259 VLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSS- 317
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTP 206
PY L ++ AK R +L G+ P
Sbjct: 318 -PYI--TLANIYSAAKRPKDAARIRKLMEERGIKKKP 351
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K GY P T +VL D+ ++ KE SERLA+A+GLI+TPPG L+I KNLR+CG+CH
Sbjct: 779 KQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCH 838
Query: 225 NFIKKLSSIENREIIVRD 242
+K +S IE+REII+RD
Sbjct: 839 MVMKMVSMIEDREIIMRD 856
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 46 DLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFL 105
+K +E ++ E G++ + TF+ VI C G V EG Q+F+S+ RD+ INPT+EH+
Sbjct: 584 SMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYA 643
Query: 106 GIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKK 165
+VDLY R K+ E IR+M A ++VW TL + + LG+ S+ LS +
Sbjct: 644 CMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPH 703
Query: 166 DAGYMPYTEYVL 177
D+ + YVL
Sbjct: 704 DS-----STYVL 710
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 60 GVRPNWSTFVGVITACGCFGA-VDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
G++PN T VI AC C A VD+G Q F +++ Y + + +V +Y R I
Sbjct: 496 GIKPNEFTISSVIDACACPSAGVDQGRQ-FHAISIKYRYHDAICVSSALVSMYSRKGNID 554
Query: 119 EAREFIRNMQIDASSVVWETL-EKYAQ 144
A + + Q D V W ++ YAQ
Sbjct: 555 SA-QIVFERQTDRDLVSWNSMISGYAQ 580
>gi|367059928|gb|AEX10959.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059930|gb|AEX10960.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059932|gb|AEX10961.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059934|gb|AEX10962.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059936|gb|AEX10963.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059938|gb|AEX10964.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059940|gb|AEX10965.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059942|gb|AEX10966.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059944|gb|AEX10967.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059946|gb|AEX10968.1| hypothetical protein 0_10719_01 [Pinus taeda]
gi|367059948|gb|AEX10969.1| hypothetical protein 0_10719_01 [Pinus taeda]
Length = 153
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K+AGY+P +VL D++ E KE + SE+LA+A+GLI+T PG +RI KNLR
Sbjct: 52 RLSGQMKEAGYVPDKNFVLHDVEDEQKEHVLYHHSEKLALAFGLINTSPGNPIRIIKNLR 111
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+CG+CH+ IK +S I RE VRD T
Sbjct: 112 VCGDCHSAIKFISKIVVREFFVRDAT 137
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 16/197 (8%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK- 116
N ++P+ S + +++AC +G + G + + N + +++ + ++Y +K
Sbjct: 588 NMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSEN--VGYYVLLSNIYANTEKW 645
Query: 117 --IAEAREFIRNMQID-----ASSVVWETLEKYA---QTEPGLLLGEPSSSLR-LSNKKK 165
+ + R R+ + +S VV E + QT P E L+ LS K K
Sbjct: 646 EGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYT--EIYKELKVLSAKMK 703
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
GY+P +V +D++++ KE+ SERLA+A+G+ISTPP +RI KNLR+CG+CHN
Sbjct: 704 SLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHN 763
Query: 226 FIKKLSSIENREIIVRD 242
K +S I REI+VRD
Sbjct: 764 ATKYISRISEREIVVRD 780
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+ + TFV +++AC G VDEG + F+ + ++Y I P+L+H+ +VDL GR + +A
Sbjct: 523 VKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKA 582
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
E +RNM I + +W L + LG +S L ++ GY
Sbjct: 583 YELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGY 631
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+++ + AGY+P T+ +L D++ E KE Y SERLA+A+GL+STPPG LR+ KNLR+
Sbjct: 682 LNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRV 741
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH K +S + REI+VRD
Sbjct: 742 CSDCHTATKYISKLRGREILVRD 764
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+ + + DG + + +FV V++A G+V +G+Q+F ++ +D+ I PT E + +VD
Sbjct: 495 LQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVD 554
Query: 110 LYGRLQKIAEAREFIRNMQ-IDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
L GR +I EA + + + ++W TL +T + ++ L +G
Sbjct: 555 LLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSG 614
Query: 169 YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIK 228
VL ++ A + R +L + G + PGR+ ++ I H F++
Sbjct: 615 ----AYVVLSNVYAAAGDWDGVNRMRKLMRSRG-VKKEPGRS-----SIEILNRVHEFLE 664
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 30 IFLD--SPDIIELLNVCMDL-------KLLEAGKRFENDGVRPNWSTFVGVITACGCFGA 80
IF+D S D+I +C+ + L+ + + +G RP +T V V+ C A
Sbjct: 365 IFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAA 424
Query: 81 VDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWET- 138
+ +G Q H + + + +E ++++YG+ K+AEAR M +VW +
Sbjct: 425 LQKGRQIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEARSVFEKMA-KRDILVWNSM 481
Query: 139 LEKYAQ 144
L YAQ
Sbjct: 482 LGAYAQ 487
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 122/271 (45%), Gaps = 47/271 (17%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG-KRFEN----DGVRPNWSTFVGVI 72
ALE+ K+ G+ + I +L+ C + L+ G K F++ GV P + ++
Sbjct: 562 ALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIV 621
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL------------QKIAEA 120
G G++ E Q S+ D FLG ++G L Q+ +
Sbjct: 622 DILGRSGSLSEAIQFINSMPYKADA-LVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDP 680
Query: 121 REFIRNMQIDASSVVWETL--------EKYAQTEPG------------LLLGEPSSS--- 157
+I + AS W+ + EK E G +G+ S
Sbjct: 681 AAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAA 740
Query: 158 ------LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
LS K K GY+P ++VL D+++E KEK SE++AVA+GLIST + +
Sbjct: 741 EIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPI 800
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRD 242
R+ KNLRICG+CH+ IK +S REIIVRD
Sbjct: 801 RVFKNLRICGDCHSAIKYISMATGREIIVRD 831
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + R +++A +V + +++ + + I + LE + +GVR
Sbjct: 516 NALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVR 575
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN T++ V++AC G V+EG++HF+S+ ++ + P +EH+ IVD+ GR ++EA +
Sbjct: 576 PNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQ 635
Query: 123 FIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD-AGYM 170
FI +M A ++VW T + L LG+ ++ + + + D A Y+
Sbjct: 636 FINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYI 684
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 110/214 (51%), Gaps = 32/214 (14%)
Query: 51 EAGKRFENDGVRPN---WSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH---F 104
+A + +N V+PN W T +G T G G + R + +N +H +
Sbjct: 374 QAYEYIQNMPVQPNAVIWRTLLGACTIHGHLG--------LGEIARSHLLNLEPKHSGDY 425
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKK 164
+ + +LY ++ ++ + R+M D + Y+ E G + E + R +
Sbjct: 426 VLLSNLYASERRWSDVQVIRRSMLKDGV----KKTPGYSLVELGNRVYEFTMGDRSHPQS 481
Query: 165 KDA--------------GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
+D GY+P+T VL D+++E KE+ +Y SE++A+A+ L++TPPG
Sbjct: 482 QDVYALLEKITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTP 541
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
+R+ KNLR+C +CH IK ++ I +REI++RD++
Sbjct: 542 IRVMKNLRVCADCHMAIKLIAKIYDREIVIRDRS 575
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE K E G+ P+ TFVGV+ AC G +DEGF++F + + I P +EH+ +VD
Sbjct: 305 LELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVD 364
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
L R + +A E+I+NM + ++V+W TL L LGE + S L+ + K +G
Sbjct: 365 LLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSG- 423
Query: 170 MPYTEYVL 177
+YVL
Sbjct: 424 ----DYVL 427
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K GY P T +VL D+ ++ KE SERLA+A+GLI+TPPG L+I KNLR+CG+CH
Sbjct: 779 KQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCH 838
Query: 225 NFIKKLSSIENREIIVRD 242
+K +S IE+REII+RD
Sbjct: 839 MVMKMVSMIEDREIIMRD 856
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 46 DLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFL 105
+K +E ++ E G++ + TF+ VI C G V EG Q+F+S+ RD+ INPT+EH+
Sbjct: 584 SMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYA 643
Query: 106 GIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKK 165
+VDLY R K+ E IR+M A ++VW TL + + LG+ S+ LS +
Sbjct: 644 CMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPH 703
Query: 166 DAGYMPYTEYVL 177
D+ + YVL
Sbjct: 704 DS-----STYVL 710
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 60 GVRPNWSTFVGVITACGCFGA-VDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
G++PN T VI AC C A VD+G Q F +++ Y + + +V +Y R I
Sbjct: 496 GIKPNEFTISSVIDACACPSAGVDQGRQ-FHAISIKYRYHDAICVSSALVSMYSRKGNID 554
Query: 119 EAREFIRNMQIDASSVVWETL-EKYAQ 144
A + + Q D V W ++ YAQ
Sbjct: 555 SA-QIVFERQTDRDLVSWNSMISGYAQ 580
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 80/272 (29%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+A K FE + G+ P+ TF ++ AC G V+EG +FE++++ Y I+P L+H+ +
Sbjct: 319 DAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCM 378
Query: 108 V----------DLYGRLQKIA-------------------------------------EA 120
V D YG ++++ +
Sbjct: 379 VDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDG 438
Query: 121 REFIRNMQIDASSVVWETLEKY--AQTEPGLLLGEPSSSLRLSNK--------------- 163
R ++ I ++S +W+ + + GL+ S + NK
Sbjct: 439 RNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESE 498
Query: 164 -------------KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
K + GY TE+VL D+ ++ KE+ SE++A+A+GL+ P
Sbjct: 499 KIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEP 558
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+ I+KNLRICG+CH K +S IE R II+RD
Sbjct: 559 IIIRKNLRICGDCHETAKAISLIEKRRIIIRD 590
>gi|190612837|gb|ACE80796.1| pentatricopeptide repeat protein [Isoetes engelmannii]
Length = 152
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 61/83 (73%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS + AGY+P T +VL DL +E K+ + SE+LA+A+GLISTP G T+R+ KNLRI
Sbjct: 59 LSEQIVQAGYVPDTRFVLHDLTEEEKKFSLCHHSEKLAIAFGLISTPQGATIRVIKNLRI 118
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ K +S + +REIIVRD
Sbjct: 119 CGDCHSATKFISKLVDREIIVRD 141
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 113/273 (41%), Gaps = 77/273 (28%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFES---------------- 90
+++ AG + +RPN T++ + AC G VDEG F +
Sbjct: 845 FRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYAC 904
Query: 91 ----------VTRDYDINPTLEHFLGIVDLYG------RLQKIAE--------------- 119
V Y++ T+ L VD + R+ + E
Sbjct: 905 LVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPN 964
Query: 120 -AREFIRNMQIDASSVVWETL--------EKYAQTEPG------------LLLGEPSSSL 158
A ++ I +S+ +W+ E + EPG L G+ S
Sbjct: 965 VASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQ 1024
Query: 159 R---------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
LS + + GY+P VL ++D E KE SERLA+A+GL++TPPG
Sbjct: 1025 SKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGT 1084
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
T+R+ KNLR+C +CH K +S I +REII+RD
Sbjct: 1085 TIRVAKNLRVCNDCHVATKIISKIVDREIILRD 1117
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 107/256 (41%), Gaps = 76/256 (29%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN+ T V VIT+C G +G++ FE++ + I P EH+ +VDL GR +A E
Sbjct: 314 PNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYE 373
Query: 123 FIRNMQIDASSVVWETL----EKYAQTEPGLLLGE------PSSS---LRLSNK------ 163
I+ M + S VW L + + +TE G + E P S + LSN
Sbjct: 374 VIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGR 433
Query: 164 ----------------KKDAG--YMPYTEYV----------------------LRDLDQE 183
KKD G ++ + V LR Q
Sbjct: 434 WAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQA 493
Query: 184 AKEKPQTYRS-----------------ERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
A P T S E+LA+A+GLI PPG +RI KNLRIC +CH
Sbjct: 494 AGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRA 553
Query: 227 IKKLSSIENREIIVRD 242
K +S I REIIVRD
Sbjct: 554 FKFISGIVGREIIVRD 569
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 16/197 (8%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK- 116
N ++P+ S + +++AC +G + G + + N + +++ + ++Y +K
Sbjct: 588 NMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSEN--VGYYVLLSNIYANTEKW 645
Query: 117 --IAEAREFIRNMQID-----ASSVVWETLEKYA---QTEPGLLLGEPSSSLR-LSNKKK 165
+ + R R+ + +S VV E + QT P E L+ LS K K
Sbjct: 646 EGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKY--TEIYKELKVLSAKMK 703
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
GY+P +V +D++++ KE+ SERLA+A+G+ISTPP +RI KNLR+CG+CHN
Sbjct: 704 SLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHN 763
Query: 226 FIKKLSSIENREIIVRD 242
K +S I REI+VRD
Sbjct: 764 ATKYISRISEREIVVRD 780
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+ + TFV +++AC G VDEG + F+ + ++Y I P+L+H+ +VDL GR + +A
Sbjct: 523 VKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKA 582
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
E +RNM I + +W L + LG +S L ++ GY
Sbjct: 583 YELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGY 631
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 59/293 (20%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-- 59
+N+ + L + VK + V + + +GI D + LL C+ L++ G RF N
Sbjct: 382 MNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAIS 441
Query: 60 -----------------------------------GVRPNWSTFVGVITACGCFGAVDEG 84
+RPN + +++ C + +
Sbjct: 442 CVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC----RLVKD 497
Query: 85 FQHFESVTRDY-DINP-TLEHFLGIVDLY---GRLQKIAEAREFI-RNMQIDASSVVWET 138
Q E+V ++ + P +++ + ++Y GR + AE R+ + R W
Sbjct: 498 TQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIE 557
Query: 139 LEKYAQTEPGLLLGEPSSSLR---------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQ 189
LE T L + S L L N+ + G++P TE+V D++ E KE+
Sbjct: 558 LEG---TVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVL 614
Query: 190 TYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+ SE+LAVA+GLIST G+ +R+ KNLR+CG+CH +K +S I REI+VRD
Sbjct: 615 GHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRD 667
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 53/290 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR-----FE 57
N+ + L ALE+ ++++ G D + +L+ C L+E G++ E
Sbjct: 436 NAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE 495
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP---TLEHFLGIVDLYGRL 114
+ + P + +I G G DE E++ ++ ++ P LG ++G +
Sbjct: 496 DYDISPKLQHYGCMIDLLGRAGLFDEA----EALMKNMEMKPDGAIWGSLLGACRVHGNV 551
Query: 115 QKIAEAREFIRNMQ------------IDASSVVWETL--------EKYAQTEPGLLLGEP 154
+ A + + ++ I A++ W+ + +K + PG E
Sbjct: 552 ELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEV 611
Query: 155 SSSL-------RLSNKKKD--------------AGYMPYTEYVLRDLDQEAKEKPQTYRS 193
S + ++ + +D AG++P T VL D+D+E KE ++ S
Sbjct: 612 DSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHS 671
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
E+LA+A+GLIST P T+RI KNLR+CG CH+ IK +S I NREII RD+
Sbjct: 672 EKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDR 721
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
++ + V PN TFV ++ AC GA+D G + + + + ++D+Y +
Sbjct: 354 RKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAK 413
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLL-GEPSSSLRLSNKKKDAGYMP 171
I A++ M+ ++L + GL + G + +L L + +D G+ P
Sbjct: 414 CGNIEAAKQVFAGMKP-------KSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEP 465
>gi|190612973|gb|ACE80864.1| pentatricopeptide repeat protein [Cyathea smithii]
Length = 152
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 80/140 (57%), Gaps = 11/140 (7%)
Query: 112 GRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL---------RLSN 162
G + +A+ RE +RN + + + + G + G+ S L RL
Sbjct: 4 GMWEGVAKVREALRNSGMKKKH--GRSYIEVNKRVHGFIAGDTSHPLKGEIYSELQRLIM 61
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
+ K+AGY+P T+ VL D+++E KE Y SE+LA+A+GLI+TP G L I KNLR+C +
Sbjct: 62 QVKEAGYVPDTKSVLNDVEEEIKEHVIGYHSEKLAIAFGLIATPTGSPLFITKNLRVCSD 121
Query: 223 CHNFIKKLSSIENREIIVRD 242
CH IK +S + REI+VRD
Sbjct: 122 CHAVIKFISRVVQREIVVRD 141
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 126/273 (46%), Gaps = 81/273 (29%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGF-------QHF----------- 88
LKL EA K + G +PN+ T +GV+ AC G V++G+ +HF
Sbjct: 300 LKLFEAMK---SKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGC 356
Query: 89 ------------ESVTRDYDINP-----TLEHFLGI------VDL--YGRLQKI----AE 119
E+V +++N T LG VDL Y + + A+
Sbjct: 357 IIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPAD 416
Query: 120 AREFIRNMQIDASSVVWETLEKY--------AQTEPG------------LLLGEPSSSLR 159
A +I I A+S WE + + + +PG +LG+ S R
Sbjct: 417 AGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHP-R 475
Query: 160 LSNKKKDA----------GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
+ K++ GY+P T +VL+DL+ E E Y SE+LA+ +GL+S P +
Sbjct: 476 IEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQK 535
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
T+ I+KNLRICG+CH F K +S +ENR I++RD
Sbjct: 536 TIHIRKNLRICGDCHIFAKLVSQLENRVIVIRD 568
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 60/85 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L N+ K GY+P T++VL D++ E KE + SE+LAV YG++ P G T+R+ KNLR
Sbjct: 694 QLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVFKNLR 753
Query: 219 ICGECHNFIKKLSSIENREIIVRDK 243
ICG+CHN K +S + REI+VRD+
Sbjct: 754 ICGDCHNAFKYISKVVEREIVVRDR 778
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 56/106 (52%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
+K +E ++ + + P+ TF+ ++TAC G + EG +F+++ Y I P +H+
Sbjct: 506 VKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYAR 565
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLG 152
++DL R +A+ I++M +A + +WE L + + LG
Sbjct: 566 LIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELG 611
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS + K GY+P T VL D+D+E KE SE+LA+A+G+++TPPG T+R+ KNLR+
Sbjct: 714 LSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 773
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH K +S IE+REII+RD
Sbjct: 774 CNDCHTASKFISKIEDREIILRD 796
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + KD GY+P TE+VL+DL E KE Y SE+LA+A+G +++ G+ +RI KNLR
Sbjct: 541 RLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAFGTMNSMEGKPVRIMKNLR 600
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
ICG+CH F K +S E + II+RD
Sbjct: 601 ICGDCHAFAKLVSKTEGKAIIIRD 624
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 50 LEAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
+EA K F+ +G PN T VGV+ AC G V++G+ +F S+ + + I P EH
Sbjct: 353 VEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNC 412
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD 166
+VDL GR K+ EA +FI M+ + SV+W TL + L +++ L + +D
Sbjct: 413 MVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAATEILKLEPED 472
Query: 167 AGYMPYTEYVLRDLDQ--EAKEKPQTYRSERLAVAYGLISTPPGRT 210
G + DL Q A++ +T R + + PGR+
Sbjct: 473 QGARILLSNIYADLRQWSNAEKSWKTMRDQG-------VKKEPGRS 511
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 50/287 (17%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG-----KRFE 57
N+ + R K AL + + +K + I D ++ +L+ C ++ G ++
Sbjct: 475 NTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQ 533
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
N G+ N + +I G G +DE +S+ Y T LG ++G +
Sbjct: 534 NYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPF-YPDAATWGALLGASRIHGDTELG 592
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLR--------------LSNK 163
+A E + M+ D S + YA + + E S +R + NK
Sbjct: 593 EKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNK 652
Query: 164 ----------------------------KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSER 195
KKD G++ T+ VL D+++E KE Y SE+
Sbjct: 653 THIFTVGDCSHPEAERIYAYLEELDLELKKD-GFVSSTKLVLHDVEEEEKEHMLKYHSEK 711
Query: 196 LAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
LAVA+G++S PPGR +R+ KNLR+C +CHN IK +S I R+IIVRD
Sbjct: 712 LAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRD 758
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 47/271 (17%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
AL + K++ G LD +L C L++ G ++ + G+ P + ++
Sbjct: 508 ALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLV 567
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQID-- 130
G G +DE ++++ + D N LG ++ ++ +A + + + D
Sbjct: 568 DLLGRAGHLDEANGIIKNMSLEPDAN-VWGALLGACRIHCNIELGEQAAKHLFELDPDNA 626
Query: 131 ----------ASSVVWETL--------EKYAQTEPG------------LLLGE---PSSS 157
A + WE + EK + +PG L+G+ P S
Sbjct: 627 GYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSE 686
Query: 158 LR------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
L + + AGY+P T L+D+++EAKE + SE+LA+++G+I+T PG +
Sbjct: 687 QIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPI 746
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRD 242
RI KNLR+C +CHN K +S I REIIVRD
Sbjct: 747 RIMKNLRVCSDCHNATKFISKIVGREIIVRD 777
>gi|357485447|ref|XP_003613011.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514346|gb|AES95969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 701
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE KR + G+ PN TF+ ++ AC G V+EG Q F + ++ I T +H+ ++D
Sbjct: 477 LELFKRLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMID 536
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL-------------EKYAQTEPGLLLGEPSS 156
L GR ++ EA I + + V W TL EK+ + + +
Sbjct: 537 LLGRAKRFEEAAMLIEEGE-NPDVVQWRTLLNACKIHGEVEMAEKFMRKMLNQAPRDGET 595
Query: 157 SLRLSNKKKDAG-YMPYTEYVLRDLDQEAKEKPQ-----TYRSERLAVAYGLIST-PPGR 209
+ L+N AG + E D K+ P + SE+LA+A+ L T
Sbjct: 596 HILLTNIYASAGKWDNVIEMKSAGRDLRLKKSPAMSWLISIESEKLAIAFALWKTCGKST 655
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
T+RI KNLR+CG+CH++IK +S + R+II RD
Sbjct: 656 TIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARD 688
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K K AGY+P T +VL D+ +E KE T SE+LA+A+GL++T PG LR+ KNLRI
Sbjct: 515 LPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRI 574
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH K +S I REIIVRD
Sbjct: 575 CGDCHAATKFISKIYEREIIVRD 597
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 50 LEAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
+EA FEN GV+P+ TF+G+++ C G +D G HF + + + P +EH+
Sbjct: 326 VEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYAC 385
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
+VDL GR ++ EA+E I M + A VW L ++ L + E ++
Sbjct: 386 VVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAA 435
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K K AGY+P T +VL D+ +E KE T SE+LA+A+GL++T PG LR+ KNLRI
Sbjct: 589 LPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRI 648
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH K +S I REIIVRD
Sbjct: 649 CGDCHAATKFISKIYEREIIVRD 671
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 50 LEAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
+EA FEN GV+P+ TF+G+++ C G +D G HF + + + P +EH+
Sbjct: 400 VEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYAC 459
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
+VDL GR ++ EA+E I M + A VW L ++ L + E
Sbjct: 460 VVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAE 506
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 59/80 (73%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K G++P TE VL DL++E KE+ ++ SE+LA+A+GLI TP TLRI KNLR+C +CH
Sbjct: 690 KKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCH 749
Query: 225 NFIKKLSSIENREIIVRDKT 244
+ IK +S + REIIVRD T
Sbjct: 750 SAIKFISKLVGREIIVRDAT 769
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 69/132 (52%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
II L + + L +R +G++P+ T+VGV++AC G V++G ++ + +
Sbjct: 486 IIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHK 545
Query: 97 INPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
I PT H+ ++DL+GR + EA FI NM I+ + W +L + + L E ++
Sbjct: 546 IIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAA 605
Query: 157 SLRLSNKKKDAG 168
L + +++G
Sbjct: 606 ERLLLIEPENSG 617
>gi|2244842|emb|CAB10264.1| hypothetical protein [Arabidopsis thaliana]
gi|7268231|emb|CAB78527.1| hypothetical protein [Arabidopsis thaliana]
Length = 587
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 104/243 (42%), Gaps = 77/243 (31%)
Query: 76 GCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVV 135
GC GAV+ G + F+S+ Y I P EH+ IVD+ GR + A EFI+ M I + V
Sbjct: 328 GC-GAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISV 386
Query: 136 WETLEK----YAQTEPGLLLGE------PSSS---LRLSNK------------------- 163
W L+ + + + GLL E P S + LSN
Sbjct: 387 WGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKG 446
Query: 164 ---KKDAGY------------------------MPYTEYVLRDLDQEAKEKPQ------- 189
KK AGY + T LR+ + A KP
Sbjct: 447 VGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYD 506
Query: 190 ----------TYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREII 239
++ SE+LA+A+GL+S P +RI KNLRICG+CH+F K +S REII
Sbjct: 507 LEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREII 566
Query: 240 VRD 242
VRD
Sbjct: 567 VRD 569
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 8/139 (5%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLG---EPSSSLRLSNKK--- 164
GR +AE R +R ++ S W +EK G + E SS +++ K
Sbjct: 547 GRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGM 606
Query: 165 -KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
++AGY P + +VL D+D+E K + + SERLAVA+GL+ P G +R+ KNLR+CG+C
Sbjct: 607 LREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDC 666
Query: 224 HNFIKKLSSIENREIIVRD 242
H+ IK ++ I REII+RD
Sbjct: 667 HSAIKLIAKITGREIILRD 685
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+ G+ + TFVGV++AC G V EG + FES+ Y + P EH+ +VDL GR +
Sbjct: 424 SSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLV 483
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPY 172
+A + I+ M ++A +++W L +T + L E ++ L + K+AG PY
Sbjct: 484 NDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAG--PY 536
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 10/204 (4%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFL-- 105
K+ EA V P+ + + +++AC G ++ G + +++ + + + +L + L
Sbjct: 555 KINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIK-LEPSNSLPYVLLS 613
Query: 106 GIVDLYGRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSLRLSNKK 164
+ + GR + A R ++ M I+ W ++ T P ++ S
Sbjct: 614 NMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKID 673
Query: 165 ------KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
K+AG++P + LRD+D+EAKE+ Y SE+LAVA+GL++ G +RI KNLR
Sbjct: 674 EMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLR 733
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH+ +K +SSI R II+RD
Sbjct: 734 VCGDCHSAMKYISSIFKRHIILRD 757
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 46 DLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFL 105
LK ++ K N G+ N TF ++TAC A G Q + P +
Sbjct: 217 SLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWS-GFGPNVYVQS 275
Query: 106 GIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+VD+Y + +A AR + M+ID V W ++
Sbjct: 276 ALVDMYAKCGDLASARMILDTMEID-DVVCWNSM 308
>gi|190612827|gb|ACE80791.1| pentatricopeptide repeat protein [Pilularia globulifera]
Length = 152
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 63/85 (74%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+AGY+P +VL+++D+E + ++ SE+LA+A+GLISTPPG TLRI KNLR+
Sbjct: 59 LTTELKEAGYVPDPRFVLQNVDEEEQLSHLSHHSEKLAIAFGLISTPPGTTLRIFKNLRV 118
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CH K + I R+I++RD T
Sbjct: 119 CGDCHTAAKLIGKINERKILLRDAT 143
>gi|147776476|emb|CAN67357.1| hypothetical protein VITISV_032923 [Vitis vinifera]
Length = 485
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 122/289 (42%), Gaps = 63/289 (21%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG---KRFENDGVRPNWSTFVGVITA 74
AL + D+++ +G+ ++ LL+ C L L+ G + ND R ++ V
Sbjct: 182 ALALFDQMRAVGVKPSEATVVSLLSACAHLGALDKGLHXHTYINDN-RIEVNSIVXTALV 240
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
G VDEG + + ++ Y I P +EH+ ++DL R + EA E I M ++ +
Sbjct: 241 DIHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPC 300
Query: 135 VWETL----EKYAQTEPGLLLG------EPSSSLR---LSN------KKKDA-------- 167
L + E G ++G +P S R LSN K DA
Sbjct: 301 ALGALLGGCRIHGNFELGEMVGKXLINLQPCXSGRYILLSNIYAAAKKWDDARKVRNLMK 360
Query: 168 --------------------------------GYMPYTEYVLRDLDQEAKEKPQTYRSER 195
GY T VL D+++E KE SE+
Sbjct: 361 VNXISKVXGVSVIEXKGMVHRFVAGDWLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEK 420
Query: 196 LAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
LA+AYGL+ +RI KNLR+C +CH+ K +S + REIIVRD+
Sbjct: 421 LAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVXKLISKVYGREIIVRDRN 469
>gi|190612777|gb|ACE80766.1| pentatricopeptide repeat protein [Porella platyphylla]
gi|358357144|gb|AEU08412.1| pentatricopeptide repeat protein [Porella platyphylla]
Length = 152
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
R+S K+ GY+P T +VL D+D+E KE SE+LA+A+GLISTP LRI KNLR
Sbjct: 58 RVSGLMKEEGYLPDTSFVLHDVDEEKKEARLCRHSEKLAIAFGLISTPAATPLRIFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K ++ + REIIVRD
Sbjct: 118 VCGDCHTATKFIAKVTGREIIVRD 141
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 14/208 (6%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFLG 106
KL EA + V+P+ + + ++ AC G ++ G + + T +++ P ++
Sbjct: 632 KLDEAKEILNQMDVKPDATVWKALLAACRVHGNLELGER---AATNLFELEPMNAMPYVM 688
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASS----VVWETLEKYAQTEPGLLLGEPSSSLRLSN 162
+ ++Y +K +A + R M+ + W + T G P + S
Sbjct: 689 LSNMYLAARKWDDAAKIRRLMKSKGITKEPGCSWIEMNSRLHTFISEDRGHPREAEIYSK 748
Query: 163 ------KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKN 216
+ K+ GY+P + L D+D+E KE Y SE+LAVA+GL+++PPG +RI KN
Sbjct: 749 IDEIIRRIKEVGYVPDMNFSLHDMDREGKEAGLAYHSEKLAVAFGLLASPPGAPIRIFKN 808
Query: 217 LRICGECHNFIKKLSSIENREIIVRDKT 244
LR+CG+CH+ +K +S + R II+RD
Sbjct: 809 LRVCGDCHSAMKYISGVFTRHIILRDSN 836
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 48/234 (20%)
Query: 34 SPD---IIELLNVCMDLKLLEAGKRFEND----GVRPNWS---TFVGVITACGCFGAVDE 83
SPD + +L+ C +L LLE GK+ +D G+R + S + V + CGC D
Sbjct: 512 SPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADA 571
Query: 84 GF----------------------------QHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
F ++F+ + + Y I P EH+ ++DL+GRL
Sbjct: 572 IFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQMKKIYGIEPGPEHYACMIDLFGRLG 631
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEY 175
K+ EA+E + M + + VW+ L + L LGE +++ + +A MPY
Sbjct: 632 KLDEAKEILNQMDVKPDATVWKALLAACRVHGNLELGERAATNLFELEPMNA--MPYV-- 687
Query: 176 VLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKK 229
+L ++ A++ + RL + G I+ PG + I+ N R+ H FI +
Sbjct: 688 MLSNMYLAARKWDDAAKIRRLMKSKG-ITKEPGCSW-IEMNSRL----HTFISE 735
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 46 DLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHF 104
D K +E + +GV N TF ++TAC A G Q + R+ + N ++
Sbjct: 296 DHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQS- 354
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+VD+Y + + A+ + NM+ D V W ++
Sbjct: 355 -ALVDMYAKCGDLGSAKRVLENME-DDDVVSWNSM 387
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 123/271 (45%), Gaps = 47/271 (17%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG-KRFEN----DGVRPNWSTFVGVI 72
ALE+ K+ G+ + I +L+ C + L+ G K F++ GV P + ++
Sbjct: 562 ALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMV 621
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL------------QKIAEA 120
G G++ E Q S+ D FLG ++G L Q+ +
Sbjct: 622 DILGRSGSLSEAIQFINSMPYKADA-LVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDP 680
Query: 121 REFIRNMQIDASSVVWETL--------EKYAQTEPG------------LLLGEPSSS--- 157
+I + AS+ W+ + EK E G +G+ S
Sbjct: 681 AAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAA 740
Query: 158 ------LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
LS K K GY+P ++VL D+++E KEK SE++AVA+GLIST + +
Sbjct: 741 EIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPI 800
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRD 242
R+ KNLRICG+CH+ IK +S REIIVRD
Sbjct: 801 RVFKNLRICGDCHSAIKYISMATGREIIVRD 831
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + R +++A +V + +++ + + I + LE + +GVR
Sbjct: 516 NALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVR 575
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN T++ V++AC G V+EG++HF+S+ ++ + P +EH+ +VD+ GR ++EA +
Sbjct: 576 PNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQ 635
Query: 123 FIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD-AGYM 170
FI +M A ++VW T + L LG+ ++ + + + D A Y+
Sbjct: 636 FINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYI 684
>gi|147856667|emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]
Length = 1148
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K+AGY+P T +VL D+DQE KE+ SERLAVAYGL+S+P +R+ KNLR+
Sbjct: 707 LKAQMKEAGYVPETRFVLHDIDQEGKEEALLAHSERLAVAYGLLSSPARSPIRVIKNLRV 766
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH +K +S + RE+I+RD
Sbjct: 767 CGDCHTALKIISKLVGRELIIRD 789
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 8/124 (6%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+F+ G++P+ F+GV AC G V EG HF S+++DY I P+++H+ +VD+ G
Sbjct: 535 QFKESGLKPDXQMFIGVFMACSVLGDVIEGMLHFNSMSKDYGIVPSMKHYASMVDMLGNS 594
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL-------RLSNKKKDA 167
+ EA EF+ M ++ S VWETL + + + +G+ + L RL+ + K A
Sbjct: 595 GYLDEALEFVEKMPLEPSVDVWETLMNICRVQGNMEIGDRCAELVEHLEPSRLTEQSK-A 653
Query: 168 GYMP 171
G +P
Sbjct: 654 GLVP 657
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 77/261 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHF------------------------------- 88
G+RP+ TF+ V+TAC G VD+G ++F
Sbjct: 513 GIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSE 572
Query: 89 -ESVTRDYDINPTLEHF--------------LGIV--------------------DLY-- 111
ES+ PT E + LGI+ ++Y
Sbjct: 573 AESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAA 632
Query: 112 -GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL------RLSNK 163
G+ +++A R+ +R+ + + W +E T P + L +
Sbjct: 633 TGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKE 692
Query: 164 KKDAGYMPYTEYVLRDLDQEA-KEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
+ GY+P T +VL D++ + KE T SE++AVA+GL+ PPG T+RI KNLR CG+
Sbjct: 693 MRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGD 752
Query: 223 CHNFIKKLSSIENREIIVRDK 243
CHNF + LS + R+II+RD+
Sbjct: 753 CHNFFRFLSKVVQRDIILRDR 773
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
++ ++ K GY+P T VL DL++E KE+ + SE+LA+A+GLISTP TLRI KNLR
Sbjct: 685 KIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLR 744
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+C +CH IK +S + REIIVRD T
Sbjct: 745 VCNDCHTAIKFISKLVGREIIVRDTT 770
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD-INPTLEHFLG 106
EA + FE +G+RP+ T+VGV +AC G V++G Q+F+ + +D D I PTL H+
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD-MMKDVDKIIPTLSHYAC 556
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
+VDL+GR + EA+EFI M I+ V W +L + + LG+ ++
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAA 606
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 59/78 (75%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K+AG++P + LRD+D+EAKE+ Y SE+LAVA+GL++ G +RI KNLR+CG+CH
Sbjct: 680 KEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCH 739
Query: 225 NFIKKLSSIENREIIVRD 242
+ +K +SSI R II+RD
Sbjct: 740 SAMKYISSIFKRHIILRD 757
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 46 DLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFL 105
LK ++ K N G+ N TF ++TAC A G Q + P +
Sbjct: 217 SLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWS-GFGPNVYVQS 275
Query: 106 GIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+VD+Y + +A AR + M+ID V W ++
Sbjct: 276 ALVDMYAKCGDLASARMILDTMEID-DVVCWNSM 308
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%)
Query: 157 SLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKN 216
+ R+ + K AG++P + VL D+D E KE+ + SE+LA+A+GLISTP TLR+ KN
Sbjct: 595 AARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKN 654
Query: 217 LRICGECHNFIKKLSSIENREIIVRDKT 244
LR+C +CH IK +S + +REIIVRD T
Sbjct: 655 LRVCNDCHAAIKAISKVTDREIIVRDAT 682
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 61/109 (55%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV P+ T+VGV++AC G V+EG ++++ + ++ I P + H+ +VDL R +E
Sbjct: 422 GVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSE 481
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
A+EFIR M ++ ++ W +L + L E ++ LS ++G
Sbjct: 482 AQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSG 530
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
++ ++ K GY+P T VL DL++E KE+ + SE+LA+A+GLISTP TLRI KNLR
Sbjct: 685 KIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLR 744
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+C +CH IK +S + REIIVRD T
Sbjct: 745 VCNDCHTAIKFISKLVGREIIVRDTT 770
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD-INPTLEHFLG 106
EA + FE +G+RP+ T+VGV +AC G V++G Q+F+ + +D D I PTL H+
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD-MMKDVDKIIPTLSHYAC 556
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
+VDL+GR + EA+EFI M I+ V W +L + + LG+ ++
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAA 606
>gi|296082479|emb|CBI21484.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 59/80 (73%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K G++P TE VL DL++E KE+ ++ SE+LA+A+GLI TP TLRI KNLR+C +CH
Sbjct: 495 KKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCH 554
Query: 225 NFIKKLSSIENREIIVRDKT 244
+ IK +S + REIIVRD T
Sbjct: 555 SAIKFISKLVGREIIVRDAT 574
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 62/84 (73%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ + K G++P T VL D+++E KE Y SER+AVA+GL+STPPG+T+R+ KNLR
Sbjct: 477 IAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRT 536
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
C +CH+ +K +S+ REIIVRD+
Sbjct: 537 CSDCHSAMKLISNAFKREIIVRDR 560
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + C+ ++AA++V L IF + I+ L + + A E +G++
Sbjct: 244 NALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIK 303
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
P+ TFVG+++ C G + G ++F + Y + P +EH+ +VDL GR + EA E
Sbjct: 304 PDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALE 363
Query: 123 FIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQ 182
IR M + +S+V +L + Q LGE + L D G + L +L
Sbjct: 364 LIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVF----LSNLYA 419
Query: 183 EAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
+L + G+ TP ++ +
Sbjct: 420 SLSRWDDVNTCRKLMIKRGVHKTPGCSSIEV 450
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 131/288 (45%), Gaps = 47/288 (16%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND--- 59
S + L E K A+ V +++K +G+ D I +L C +++ G+ + +
Sbjct: 309 TSVIDALAMEGRGKEAVGVFEEMKAVGVLPDDVAFIGVLTACSHAGMVDEGRGYFDSMKT 368
Query: 60 --GVRPNWSTFVGVITACGCFGAVDEGFQHF----------------------------E 89
G+ P + ++ G G V++G + E
Sbjct: 369 EYGIEPKIEHYGCMVDMFGRAGMVEQGLEFVRAMPMKPNPIIWRTLVAACRAHGRLELGE 428
Query: 90 SVTRDYDINPTLEH---FLGIVDLYGRLQKIAEAREFIRNM------QIDASSVV---WE 137
S+TR+ +N H ++ + ++Y Q+ E E R M ++ S+V E
Sbjct: 429 SITRNL-LNEFPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSLVELDGE 487
Query: 138 TLEKYAQTEPGLLLGEPSSSLR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERL 196
E A E E + +S + + G++ T VL DLD+E KE + SE+L
Sbjct: 488 VHEFIAGDESHPQYKEIYRMVEEMSRELRRIGHIAATSEVLLDLDEEDKEGALQWHSEKL 547
Query: 197 AVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
A+A+ L+ TPPG +R+ KNLR+C +CH IK +S + NREI+VRD++
Sbjct: 548 AIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYNREIVVRDRS 595
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 62/84 (73%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ + K G++P T VL D+++E KE Y SER+AVA+GL+STPPG+T+R+ KNLR
Sbjct: 405 IAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRT 464
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
C +CH+ +K +S+ REIIVRD+
Sbjct: 465 CSDCHSAMKLISNAFKREIIVRDR 488
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ + C+ ++AA++V L IF + I+ L + + A E +G++
Sbjct: 172 NALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIK 231
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
P+ TFVG+++ C G + G ++F + Y + P +EH+ +VDL GR + EA E
Sbjct: 232 PDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALE 291
Query: 123 FIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQ 182
IR M + +S+V +L + Q LGE + L D G + L +L
Sbjct: 292 LIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVF----LSNLYA 347
Query: 183 EAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
+L + G+ TP ++ +
Sbjct: 348 SLSRWDDVNTCRKLMIKRGVHKTPGCSSIEV 378
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 128/292 (43%), Gaps = 60/292 (20%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNV---CMDLKLLEAGKRF--- 56
NS L + + + +++ N+G+ P+ I L+V C L+E G+ +
Sbjct: 297 NSMLIACAQHAHTQRVFGLFEEMGNVGM---KPNFISFLSVLYACSHAGLVEKGREYFSL 353
Query: 57 -ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
+ G+ P + ++ G G + E SV + + PT E G + R+
Sbjct: 354 MRDYGIEPETEHYASLVDLLGRAGKLQEAV----SVIKQMPMRPT-ESVWGALLTGCRIH 408
Query: 116 KIAEAREFI--RNMQIDASSVVWETL----------------------EKYAQTEPGLLL 151
K E F+ R +++D+SS L ++ + E GL
Sbjct: 409 KDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSW 468
Query: 152 GEPSSSLRL------SNKK---------------KDAGYMPYTEYVLRDLDQEAKEKPQT 190
E + + S+ K + AGY+ T +VLR +D E K +
Sbjct: 469 VEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIR 528
Query: 191 YRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
Y SERLA+A+GLI+ PPGR +R+ KNLR+CG+CH IK +S R +IVRD
Sbjct: 529 YHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRD 580
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
++ A +V D++ + L + +I ++ + N G++PN+ +F+ V+ A
Sbjct: 278 IEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYA 337
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G V++G ++F S+ RDY I P EH+ +VDL GR K+ EA I+ M + +
Sbjct: 338 CSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTES 396
Query: 135 VWETL 139
VW L
Sbjct: 397 VWGAL 401
>gi|190612737|gb|ACE80746.1| pentatricopeptide repeat protein [Lepidogyna hodgsoniae]
Length = 152
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
R+ K+AGY+P T +VL D+D+E KE SE+LA+A+GLIST P LRI KNLR
Sbjct: 58 RVYGLMKEAGYVPDTRFVLHDVDEEEKEVHLGQHSEKLAIAFGLISTSPRTPLRIFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CHN K ++ I REIIVRD
Sbjct: 118 VCGDCHNATKFIAKIVGREIIVRD 141
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+LS ++AGY P +VL D+D+E K Y SERLAVAYGL+ P G +R+ KNLR
Sbjct: 606 KLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLR 665
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH+ IK ++ + REII+RD
Sbjct: 666 VCGDCHSAIKLIAKVTGREIILRD 689
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+ GV+P+ TF+GV++AC G V EGF+ FE++ Y + P +EH+ +VDL GR ++
Sbjct: 429 SSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRV 488
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYT 173
EA E + M ++ ++VW L + L L E + + K+AG PY
Sbjct: 489 DEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAG--PYV 542
>gi|358357208|gb|AEU08444.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS K+ GY+P T VL D+++E KE Y SE+LA+A+GLI+TPPG + + KNLR
Sbjct: 58 RLSECMKEDGYLPDTRCVLHDVEEEQKESSLCYHSEKLAIAFGLITTPPGTPIHVIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I R ++VRD
Sbjct: 118 VCGDCHTTTKFISKIVGRAVVVRD 141
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 108/200 (54%), Gaps = 26/200 (13%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDY-DINPTLE-HFLGIVDLYGRL---Q 115
V PN + ++TAC G + G ESV ++ P+ E +++ + ++Y +L +
Sbjct: 498 VEPNQVIWRSIVTACHARGELKLG----ESVAKELIRREPSHESNYVLLSNIYAKLLRWE 553
Query: 116 KIAEAREF--IRNM-QIDASSVVWETLEKYAQTEPGLLLGEPSSSL---------RLSNK 163
K + RE ++ M +I S+++ E Y + G+ S + +
Sbjct: 554 KKTKVREMMDVKGMRKIPGSTMIEMNNEIYE-----FVAGDKSHDQYKEIYEMVEEMGRE 608
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
K AGY+P T VL D+D+E KE SE+LA+A+ L+STPPG +RI KNLR+C +C
Sbjct: 609 IKRAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCEDC 668
Query: 224 HNFIKKLSSIENREIIVRDK 243
H+ K +S + NREI+VRD+
Sbjct: 669 HSATKFISKVYNREIVVRDR 688
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 40 LLNVCMDLKLLEAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
++ + M + LEA F+ GV P+ F+GV++AC G VD+G +F ++ +
Sbjct: 406 IVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFS 465
Query: 97 INPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
I P +EH+ +VD+ R ++ EA EF+R M ++ + V+W ++ L LGE
Sbjct: 466 IVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGE 522
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+AGY P +VL D+D KEK + SE+LA+AYGL+ TP G +RI KNLR+
Sbjct: 768 LTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRV 827
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH K +S I REI+ RD
Sbjct: 828 CGDCHTATKFISKIRKREIVARD 850
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
L+ ++ KR + V PN T VI+AC G V EG + F + D+ + P +H+
Sbjct: 579 LEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGC 638
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLG----------EPSS 156
+VDL GR ++ EA EFI++M + VW L ++ + L EPS
Sbjct: 639 MVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSY 698
Query: 157 S---LRLSNKKKDAGYMPYTEYVLRDLDQEAKEK 187
+ + LSN AG + V R +D +K
Sbjct: 699 ASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKK 732
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFL 105
+LLE R +GV PN TF+ ++ AC GA+++G Q H E ++++ +L+
Sbjct: 349 FQLLE---RMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQ--T 403
Query: 106 GIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
I ++Y + I EA + M + + V W +
Sbjct: 404 AIFNMYAKCGSIYEAEQVFSKMA-NKNVVAWTSF 436
>gi|218201741|gb|EEC84168.1| hypothetical protein OsI_30545 [Oryza sativa Indica Group]
Length = 503
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 82/142 (57%), Gaps = 13/142 (9%)
Query: 111 YGRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL---------RL 160
+G ++A+ R+ +++ I ++ W ++ T ++G+ S + L
Sbjct: 347 HGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHT---FIVGDKSHPMTKEIYSKLDEL 403
Query: 161 SNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRIC 220
+ AGY+P + L DLD+ KE ++ SERLAVA+ L+STPPG +R+KKNLRIC
Sbjct: 404 GDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRIC 463
Query: 221 GECHNFIKKLSSIENREIIVRD 242
+CH K +S+I +REII+RD
Sbjct: 464 RDCHMAFKFISNIVSREIIIRD 485
>gi|225430210|ref|XP_002282464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g25580
[Vitis vinifera]
Length = 807
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K+AGY+P T +VL D+DQE KE+ SERLAVAYGL+S+P +R+ KNLR+
Sbjct: 707 LKAQMKEAGYVPETRFVLHDIDQEGKEEALLAHSERLAVAYGLLSSPARSPIRVIKNLRV 766
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH +K +S + RE+I+RD
Sbjct: 767 CGDCHTALKIISKLVGRELIIRD 789
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 8/124 (6%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+F+ G++P+ F+GV AC G V EG HF S+++DY I P+++H+ +VD+ G
Sbjct: 535 QFKESGLKPDGQMFIGVFMACSVLGDVIEGMLHFNSMSKDYGIVPSMKHYASMVDMLGNS 594
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL-------RLSNKKKDA 167
+ EA EF+ M ++ S VWETL + + + +G+ + L RL+ + K A
Sbjct: 595 GYLDEALEFVEKMPLEPSVDVWETLMNICRVQGNMEIGDRCAELVEHLEPSRLTEQSK-A 653
Query: 168 GYMP 171
G +P
Sbjct: 654 GLVP 657
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L N+ + G++P TE+V D+++E KE+ Y SE+LAVA GLIST G+ +R+ KNLR+
Sbjct: 585 LGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRV 644
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH +K +S I REI+VRD
Sbjct: 645 CGDCHEVMKLISKITRREIVVRD 667
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 49/83 (59%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
E G+ P+ STF+G++ C G + +G + F +++ Y + T+EH+ +VDL+GR
Sbjct: 406 EKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGM 465
Query: 117 IAEAREFIRNMQIDASSVVWETL 139
+ +A I +M + +++VW L
Sbjct: 466 LDDAYRLICDMPMRPNAIVWGAL 488
>gi|449521367|ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like, partial [Cucumis sativus]
Length = 390
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 111/259 (42%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDE----------------GFQHF--------------- 88
G RPN+ TF+GVI AC VDE G +H+
Sbjct: 114 GERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDE 173
Query: 89 -ESVTRDYDIN------PTLEHFLGIVDLYGRLQKIAE---------AREFIRNMQIDAS 132
E+ R + IN TL + + Y + +KIAE +I + A
Sbjct: 174 AENFMRSHQINWDVVSWRTLLNACYVHKHYDKGKKIAEYLLQLEPRDVGTYILLSNMHAR 233
Query: 133 SVVWETL--------EKYAQTEPGLL---------------LGEPSSSLRLSNKK----- 164
W+ + E+ + EPG+ + P ++L N K
Sbjct: 234 VRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSK 293
Query: 165 -KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
+ GY+P + VL D++ E K +Y SE+LAVAYGL+ TP G +R+ KNLR+C +C
Sbjct: 294 IRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPIRVIKNLRMCDDC 353
Query: 224 HNFIKKLSSIENREIIVRD 242
H IK +S + NR I+VRD
Sbjct: 354 HTAIKLISKVANRVIVVRD 372
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 62/86 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS K K+AGY+P +E VL D+ ++ KE SE+LA+A+GLI+T PG TLRI LR
Sbjct: 694 RLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLR 753
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
IC +CH+ +K +S+I REIIVRD +
Sbjct: 754 ICHDCHSAVKFISAIARREIIVRDSS 779
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K E +G P+ TF+ V+ AC G ++G Q F S+ DY ++P + H+ I+DL R
Sbjct: 513 KEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSR 572
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
++++A E I M ++ + V W +L
Sbjct: 573 AGRLSDAEELINAMPVEPNDVTWSSL 598
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIV 108
+E + + +GVRPN+ TF V+ AC G + G H + + Y I TL + +V
Sbjct: 306 IEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKI--TLVNGTALV 363
Query: 109 DLYGRLQKIAEAREFIRNMQ 128
DLY + EAR ++
Sbjct: 364 DLYTSYGSLDEARSLFDQIE 383
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%)
Query: 157 SLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKN 216
+ R+ + K AG++P + VL D+D E KE+ + SE+LA+A+GLISTP TLR+ KN
Sbjct: 701 AARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKN 760
Query: 217 LRICGECHNFIKKLSSIENREIIVRDKT 244
LR+C +CH IK +S + +REIIVRD T
Sbjct: 761 LRVCNDCHAAIKAISKVTDREIIVRDAT 788
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 61/109 (55%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV P+ T+VGV++AC G V+EG ++++ + ++ I P + H+ +VDL R +E
Sbjct: 528 GVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSE 587
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
A+EFIR M ++ ++ W +L + L E ++ LS ++G
Sbjct: 588 AQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSG 636
>gi|357487235|ref|XP_003613905.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515240|gb|AES96863.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 768
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+F+ G++P+ F+GV AC G + EG HFES++RDYDI PT+EH++ +VD+ G +
Sbjct: 429 QFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYDIVPTMEHYVSLVDMIGSI 488
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL 158
+ EA EFI M ++ S VWETL + LG+ + L
Sbjct: 489 GHLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAEL 532
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + K+AGY+ T + L D+DQE KE SERLA+A GL+++P T+R+ KNLR
Sbjct: 600 RLRVQMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPARSTIRVIKNLR 659
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH +K +S + RE I+RD
Sbjct: 660 VCGDCHTALKIISDLVGREFIIRD 683
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 62/86 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS K K+AGY+P +E VL D+ ++ KE SE+LA+A+GLI+T PG TLRI LR
Sbjct: 695 RLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLR 754
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
IC +CH+ +K +S+I REIIVRD +
Sbjct: 755 ICHDCHSAVKFISAIARREIIVRDSS 780
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K E +G P+ TF+ V+ AC G ++G Q F S+ DY ++P + H+ I+DL R
Sbjct: 514 KEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSR 573
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
++++A E I M ++ + V W +L
Sbjct: 574 AGRLSDAEELINAMPVEPNDVTWSSL 599
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIV 108
+E + + +GVRPN+ TF V+ AC G + G H + + Y I TL + +V
Sbjct: 307 IEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKI--TLVNGTALV 364
Query: 109 DLYGRLQKIAEAREFIRNMQ 128
DLY + EAR ++
Sbjct: 365 DLYTSYGSLDEARSLFDQIE 384
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%)
Query: 157 SLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKN 216
+ R+ + K AG++P + VL D+D E KE+ + SE+LA+A+GLISTP TLR+ KN
Sbjct: 701 AARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKN 760
Query: 217 LRICGECHNFIKKLSSIENREIIVRDKT 244
LR+C +CH IK +S + +REIIVRD T
Sbjct: 761 LRVCNDCHAAIKAISKVTDREIIVRDAT 788
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 61/109 (55%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV P+ T+VGV++AC G V+EG ++++ + ++ I P + H+ +VDL R +E
Sbjct: 528 GVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSE 587
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
A+EFIR M ++ ++ W +L + L E ++ LS ++G
Sbjct: 588 AQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSG 636
>gi|190612785|gb|ACE80770.1| pentatricopeptide repeat protein [Ptilidium pulcherrimum]
Length = 152
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
R+ K+AGY+P T +VL D+++E KE + SE+LA+A+GLISTP G LRI NLR
Sbjct: 58 RVYGLMKEAGYVPDTRFVLHDVEEEKKENHLCHHSEKLAIAFGLISTPAGTPLRIFNNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I +REII RD
Sbjct: 118 VCGDCHTATKFISKIVDREIIARD 141
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 128/292 (43%), Gaps = 60/292 (20%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNV---CMDLKLLEAGKRF--- 56
NS L + + + +++ N+G+ P+ I L+V C L+E G+ +
Sbjct: 297 NSMLIACAQHAHTQRVFGLFEEMGNVGM---KPNFIXFLSVLYACSHAGLVEKGREYFSL 353
Query: 57 -ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
+ G+ P + ++ G G + E SV + + PT E G + R+
Sbjct: 354 MRDYGIEPETEHYASLVDLLGRAGKLQEAV----SVIKQMPMRPT-ESVWGALLTGCRIH 408
Query: 116 KIAEAREFI--RNMQIDASSVVWETL----------------------EKYAQTEPGLLL 151
K E F+ R +++D+SS L ++ + E GL
Sbjct: 409 KDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSW 468
Query: 152 GEPSSSLRL------SNKK---------------KDAGYMPYTEYVLRDLDQEAKEKPQT 190
E + + S+ K + AGY+ T +VLR +D E K +
Sbjct: 469 VEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIR 528
Query: 191 YRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
Y SERLA+A+GLI+ PPGR +R+ KNLR+CG+CH IK +S R +IVRD
Sbjct: 529 YHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRD 580
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
++ A +V D++ + L + +I ++ + N G++PN+ F+ V+ A
Sbjct: 278 IEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYA 337
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G V++G ++F S+ RDY I P EH+ +VDL GR K+ EA I+ M + +
Sbjct: 338 CSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTES 396
Query: 135 VWETL 139
VW L
Sbjct: 397 VWGAL 401
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 104 FLGIVDLY---GRLQKIAEAREFIRNMQIDA-SSVVWETLEKYAQT-EPGLLLGEPSSSL 158
F+ + ++Y GR +AE R +R+ ++ W +EK G G P S
Sbjct: 618 FILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSE 677
Query: 159 ------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
LS ++AGY P +VL D+D+E K + Y SE+LAVAYGL+ P G +R
Sbjct: 678 INRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIR 737
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRD 242
+ KNLR+CG+CH IK ++ + REII+RD
Sbjct: 738 VMKNLRVCGDCHAAIKLIAKVTGREIILRD 767
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ P+ TFVGV++AC G V +G + F S+ Y + +EH+ +VDL GR K+ E
Sbjct: 508 GIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNE 567
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
A + I M ++A +++W L +T L L E ++ L + K+AG
Sbjct: 568 AMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAG 616
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 14 EVKAALEVMDKL--KNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGV 71
EV A +V D++ K+ G + + E ++L LE + + +G+RPN+ + + V
Sbjct: 361 EVPKARQVFDQMREKDEGTWSAMIKVYERKG--LELDALELFRMMQREGIRPNFPSLISV 418
Query: 72 ITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQID 130
++ C +D G + H + V +D++ + L + +Y + +A+A++ +
Sbjct: 419 LSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVL--LSMYIKCGNLAKAKQVFDRFAVK 476
Query: 131 ASSVVWET-LEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMP 171
V+W + + YAQ G+ +LR+ + +G MP
Sbjct: 477 -DVVMWNSIITGYAQHGLGV------EALRVFHDMHFSGIMP 511
>gi|361068225|gb|AEW08424.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165794|gb|AFG65801.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165798|gb|AFG65803.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165808|gb|AFG65808.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165812|gb|AFG65810.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165814|gb|AFG65811.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 62/83 (74%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+AGY+P T++VL D+++E K+ + SE+LA+A+GLISTPP ++ + KNLR+
Sbjct: 56 LAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLISTPPWTSITVTKNLRV 115
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH K +S + REII+RD
Sbjct: 116 CGDCHRATKFISKVVGREIIMRD 138
>gi|125533129|gb|EAY79677.1| hypothetical protein OsI_34823 [Oryza sativa Indica Group]
Length = 895
Score = 93.6 bits (231), Expect = 6e-17, Method: Composition-based stats.
Identities = 80/269 (29%), Positives = 120/269 (44%), Gaps = 68/269 (25%)
Query: 28 IGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQH 87
I ++D+ D+ E ++V A F N G+RP+ T V V+TAC + G
Sbjct: 623 ITAYMDAGDLREAVHV--------ARNAFAN-GMRPDSFTAVRVLTACARIADLATG--- 670
Query: 88 FESVTRDYDINPTLEHFL---GIVDLYGRLQKIAEAREFIRNMQIDASSVVW-------- 136
E+V R + + VDLY + ++A+ARE M+ +V W
Sbjct: 671 -ETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMR-HKDAVAWGAMVGGYA 728
Query: 137 ------ETLEKY-AQTEPGL------LLGEPSSSLRLSN--------------------- 162
E L+ + A G+ ++G S+ RL
Sbjct: 729 SNGHPREALDLFLAMQAEGMKPDCYAVVGALSACTRLGALDLGRQAIRMVDWDEFLDNPI 788
Query: 163 ---------KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
+ K GY P TE V+ D++ E KE + SE+LA+A+ L+ T PG T+R+
Sbjct: 789 YKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRV 848
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRD 242
KNLR+C +CH IK +S I +REIIVRD
Sbjct: 849 TKNLRVCSDCHTAIKLVSRITHREIIVRD 877
>gi|383165804|gb|AFG65806.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165806|gb|AFG65807.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 62/83 (74%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+AGY+P T++VL D+++E K+ + SE+LA+A+GLISTPP ++ + KNLR+
Sbjct: 56 LAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLISTPPWTSITVTKNLRV 115
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH K +S + REII+RD
Sbjct: 116 CGDCHRTTKFISKVVGREIIMRD 138
>gi|383165800|gb|AFG65804.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165802|gb|AFG65805.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165820|gb|AFG65814.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 62/83 (74%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+AGY+P T++VL D+++E K+ + SE+LA+A+GLISTPP ++ + KNLR+
Sbjct: 56 LAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLISTPPWTSITVTKNLRV 115
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH K +S + REII+RD
Sbjct: 116 CGDCHRATKFISKVVGREIIMRD 138
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 80/272 (29%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+A K FE + G+ P+ TF ++ AC G V+EG +FE++++ Y I P L+H+ +
Sbjct: 822 DAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCM 881
Query: 108 V----------DLYGRLQKIA-------------------------------------EA 120
V D YG ++++ +
Sbjct: 882 VDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDG 941
Query: 121 REFIRNMQIDASSVVWETLEKY--AQTEPGLLLGEPSSSLRLSNK--------------- 163
R +I I ++S +W+ + + GL+ S + NK
Sbjct: 942 RNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESE 1001
Query: 164 -------------KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
K + G+ TE+VL D+D++ KE+ SE++A+A+GL+ P
Sbjct: 1002 KIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKEEMINQHSEKIAMAFGLLVISPMEP 1061
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+ I+KNLRICG+CH K +S IE R II+RD
Sbjct: 1062 IIIRKNLRICGDCHETAKAISLIEKRRIIIRD 1093
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L+ + DGV PN TFV V+ C G VDEG +HF+S+ ++ I P L+H+ +
Sbjct: 332 KCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCL 391
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL----EKYAQTEPGLLLGEPSSSLRLSN 162
VDLY R ++ +A I+ M + A + VW +L Y E G+L + L SN
Sbjct: 392 VDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSN 450
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+S + + AGY T V+ D+D+E KE SE+ A+A+G++S +RI KNLR+
Sbjct: 520 ISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKADVPIRIVKNLRV 579
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
CG+CH +S I NREIIVRD+
Sbjct: 580 CGDCHQVSMMISKIFNREIIVRDR 603
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 11/150 (7%)
Query: 104 FLGIVDLY---GRLQKIAEAREFIRNMQIDA-SSVVWETLEKYAQT-EPGLLLGEPSSSL 158
F+ + ++Y GR +AE R +R+ ++ W +EK G G P S
Sbjct: 618 FILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSE 677
Query: 159 ------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
LS ++AGY P +VL D+D+E K + Y SE+LAVAYGL+ P G +R
Sbjct: 678 INRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIR 737
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRD 242
+ KNLR+CG+CH IK ++ + REII+RD
Sbjct: 738 VMKNLRVCGDCHAAIKLIAKVTGREIILRD 767
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ P+ TFVGV++AC G V +G + F S+ Y + +EH+ +VDL GR K+ E
Sbjct: 508 GIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNE 567
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
A + I M ++A +++W L +T L L E ++ L + K+AG
Sbjct: 568 AMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAG 616
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 14 EVKAALEVMDKL--KNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGV 71
EV A +V D++ K+ G + + E ++L LE + + +G+RPN+ + + V
Sbjct: 361 EVPKARQVFDQMREKDEGTWSAMIKVYERKG--LELDALELFRMMQREGIRPNFPSLISV 418
Query: 72 ITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQID 130
++ C +D G + H + V +D++ + L + +Y + +A+A++ +
Sbjct: 419 LSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVL--LSMYIKCGNLAKAKQVFDRFAVK 476
Query: 131 ASSVVWET-LEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMP 171
V+W + + YAQ G+ +LR+ + +G MP
Sbjct: 477 -DVVMWNSIITGYAQHGLGV------EALRVFHDMHFSGIMP 511
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 59/85 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L + + AGY+P T + L DL++E K Y SE++A+A+GLIS P G +RI KNLR
Sbjct: 583 KLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLR 642
Query: 219 ICGECHNFIKKLSSIENREIIVRDK 243
ICG+CH+ IK +S I REIIVRD
Sbjct: 643 ICGDCHSAIKFISGIVGREIIVRDN 667
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V PN+ TFV V++AC G+V+ G + FES+ Y I P EH+ +VDL GR + +A
Sbjct: 409 VAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQA 468
Query: 121 REFIRNMQIDASSVVWETL 139
+FI+ M I + VW L
Sbjct: 469 YQFIKKMPIRPTVSVWGAL 487
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 58/80 (72%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K AGY+P T D +++ KE ++ SE+LA+A+GLI +PPG T+RI KNLR+C +CH
Sbjct: 603 KSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCH 662
Query: 225 NFIKKLSSIENREIIVRDKT 244
N K +S + NREI+VRD+T
Sbjct: 663 NATKLVSKVFNREIVVRDRT 682
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 59/95 (62%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V PN TF+GV++AC G VDEG F S++RD+ I P +EH+ +VD+ GR I EA
Sbjct: 423 VEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEA 482
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPS 155
+FI+NM I ++V+W TL + + +GE S
Sbjct: 483 FQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEES 517
>gi|356521885|ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Glycine max]
Length = 603
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 112/262 (42%), Gaps = 80/262 (30%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD----------- 109
++PN TFVGV+ AC G VD+G + +S+ Y + P +H+ I D
Sbjct: 324 IKPNDITFVGVLHACSHSGLVDKGLELLDSMDGKYGVTPDAKHYTCIADMLGRVGRIEEA 383
Query: 110 --------------------------LYGRLQKIAEA--REFIRNMQIDASSVV------ 135
LYGR+ EA R N Q+ + V
Sbjct: 384 YQLAKSVQVEGDGYAMLWGTLLSASRLYGRVDIALEASNRLIESNQQVAGAYVTLSNAYA 443
Query: 136 ----WETLEKY-AQTEPGLLLGEPSSS----------------------------LR-LS 161
WE ++ + + EP SS LR L
Sbjct: 444 LAGDWENAHNLRSEMKHTGVYKEPGSSWIEIKESTYLFHAGDISKYTQGREILSLLRELE 503
Query: 162 NKKKDAGYMPYTE-YVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRIC 220
+ K GY+ T+ V D+++EAKE+ + SE+LA+A+GLI+TP G T+RI KNLR+C
Sbjct: 504 ERMKGRGYVGGTKGLVFVDVEEEAKEEIVSMHSEKLALAFGLINTPKGVTIRIMKNLRMC 563
Query: 221 GECHNFIKKLSSIENREIIVRD 242
+CH K +S I RE++VRD
Sbjct: 564 RDCHGAFKLISDIVERELVVRD 585
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 53/274 (19%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
AL+ + + + G D I +L+ C + L+E GK+ N G+ P + ++
Sbjct: 477 ALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMV 536
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTL---EHFLGIVDLYGRLQ--KIAEAREFIRNM 127
G G F ES + + + E LG ++G ++ + A + F
Sbjct: 537 DILGRAGK----FHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEP 592
Query: 128 QIDASSV----------VWETLE--------KYAQTEPGLLLGEPSSSLR---------- 159
+ID++ + +W+ + + + EPG E + +
Sbjct: 593 EIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHP 652
Query: 160 -----------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPG 208
L K GY P T++VL ++ K++ Y SERLA+A+ L+ST
Sbjct: 653 KIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTR 712
Query: 209 RTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+T+RI KNLRICG+CH+F+K +S I N+E++VRD
Sbjct: 713 KTIRIFKNLRICGDCHDFMKSISEITNQELVVRD 746
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 66/109 (60%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L+A + ++G P+ TF+GV++AC G ++EG +HF S+++ Y I PT+EH+ +
Sbjct: 476 KALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACM 535
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
VD+ GR K E FI M++ ++ ++WET+ + + GE ++
Sbjct: 536 VDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAA 584
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 130/275 (47%), Gaps = 51/275 (18%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR-FEN----DGVRPNWSTFVG 70
+ A+++ +++ + G I +L C L+E GK+ FE+ G++P+ +
Sbjct: 360 RKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYAC 419
Query: 71 VITACGCFGAVDEGFQHFESV-----------------------------TRDYDINPT- 100
++ G +DE + E + R + + PT
Sbjct: 420 MVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTN 479
Query: 101 LEHFLGIVDLYG---------RLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLL- 150
+++ + D+Y R++K+ ++RE ++ S + + Y+ T
Sbjct: 480 AGNYVLLADIYAEAEMWDEVKRVKKLLDSREL---QKVPGRSWIEVRRKIYSFTSVDEFN 536
Query: 151 -LGEPSSSL--RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPP 207
GE +L LSN+ K GY P T+ VL DLDQE KE+ SE+LAVA+GLI+T
Sbjct: 537 PQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 596
Query: 208 GRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
G T+RI KNLR+C +CH+ K +S +REI+VRD
Sbjct: 597 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD 631
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 118/274 (43%), Gaps = 54/274 (19%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEN----DGVRPNWSTFVGVIT 73
A+ V +++N G+ DS + +L C LL+ G+ + N G+ P F V+
Sbjct: 374 AVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVD 433
Query: 74 ACGCFGAVDEGFQHFE---------------SVTRDYD--------------INPTLEH- 103
G G +DE + S R Y +NP EH
Sbjct: 434 LLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNP--EHS 491
Query: 104 --FLGIVDLY---GRLQKIAEAREFIRNMQIDASSVVWET-LEKYAQTEPGLLLGEPSSS 157
++ + ++Y GR +A R + I + L T L G+ S
Sbjct: 492 GYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHT---FLAGDHSHP 548
Query: 158 LR---------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPG 208
L K K+ GYMP T+ L D+++E KE SE+LAVA+ +I+T PG
Sbjct: 549 QSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPG 608
Query: 209 RTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+R+ KNLR+CG+CH K +S I REII+RD
Sbjct: 609 TPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRD 642
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L + + AGY+P T + L DL++E K Y SE++A+A+GLIS P G +RI KNLR
Sbjct: 482 KLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLR 541
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
ICG+CH+ IK +S I REIIVRD
Sbjct: 542 ICGDCHSAIKFISGIVGREIIVRD 565
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V PN+ TFV V++AC G+V+ G + FES+ Y I P EH+ +VDL GR + +A
Sbjct: 308 VAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQA 367
Query: 121 REFIRNMQIDASSVVWETL 139
+FI+ M I + VW L
Sbjct: 368 YQFIKKMPIRPTVSVWGAL 386
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 114/277 (41%), Gaps = 79/277 (28%)
Query: 45 MDLKLLEAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTL 101
M K EA FE G +P+ +F V++AC G +EG+ +F+S++R++ + +
Sbjct: 422 MHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARM 481
Query: 102 EHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE-------- 153
EH+ +V L GR ++ EA I+ M + S VW L + + LGE
Sbjct: 482 EHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFE 541
Query: 154 -----PSSSLRLSN----------------------KKKDAGY----------------- 169
P + + LSN KK+ GY
Sbjct: 542 LEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDS 601
Query: 170 ----MPYTEYVLRDLDQEAKEK---PQT-----------------YRSERLAVAYGLIST 205
MP L L E K+ P T SE+LAV GL++T
Sbjct: 602 SHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLGLLNT 661
Query: 206 PPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
PG L++ KNLRIC +CH IK +S E REI VRD
Sbjct: 662 KPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRD 698
>gi|383165792|gb|AFG65800.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165796|gb|AFG65802.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 62/83 (74%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+AGY+P T++VL D+++E K+ + SE+LA+A+GLISTPP ++ + KNLR+
Sbjct: 56 LAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLISTPPWTSITVTKNLRV 115
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH K +S + REII+RD
Sbjct: 116 CGDCHRATKFISKVVGREIIMRD 138
>gi|255578133|ref|XP_002529936.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530566|gb|EEF32444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 548
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 80/142 (56%), Gaps = 9/142 (6%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+F+ G+ P+ F+GV +ACG G V EG HFES+ +DY I P++EHF+ IVD+ G +
Sbjct: 324 QFKQAGLVPDAQLFIGVFSACGVVGDVIEGMLHFESMKKDYGIVPSMEHFVSIVDMLGTI 383
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL------RLSNKKKDAG 168
+ EA EFI M ++ S VWE+L ++ L LG+ + L N++ AG
Sbjct: 384 GHLDEALEFIEKMPMEPSIDVWESLMNLSRIHGNLELGDRCAKLVELLDASHLNEQSKAG 443
Query: 169 YMPYTEYVLRDLDQEAKEKPQT 190
+P + +L +E +KP +
Sbjct: 444 LVPAK---VSNLTKEKDKKPAS 462
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDL-KLLEAGKRFE----NDGVRPNWSTFVGVI 72
A+++ + K G+ D+ I + + C + ++E FE + G+ P+ FV ++
Sbjct: 318 AIDLFSQFKQAGLVPDAQLFIGVFSACGVVGDVIEGMLHFESMKKDYGIVPSMEHFVSIV 377
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ---KIAEAREFIRNMQI 129
G G +DE + E + + I+ E + + ++G L+ + A+ E + +
Sbjct: 378 DMLGTIGHLDEALEFIEKMPMEPSID-VWESLMNLSRIHGNLELGDRCAKLVELLDASHL 436
Query: 130 DASS--------VVWETLEKYAQTEPGLLL-----------GEPS--------SSLR-LS 161
+ S V T EK + LL G+ S + LR L
Sbjct: 437 NEQSKAGLVPAKVSNLTKEKDKKPASQNLLEVRSRVHEYRAGDTSHPETDRIYAMLRGLR 496
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
+ K+ GY+P T +VL D+DQE KE SERLA AYGL+++P R
Sbjct: 497 AQMKEHGYIPETRFVLHDVDQECKEDALLSHSERLAAAYGLLTSPXXR 544
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 32/192 (16%)
Query: 5 ELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPN 64
EL LC+E++VK A+EV++ L+ + +D P ++L+ +C + K E K + VR
Sbjct: 204 ELDELCKEKKVKEAVEVLNLLEERRVLVDLPRFLQLMRICGEAKASEEAKVVHDHLVRLQ 263
Query: 65 W----STFVGVITACGCFGAVDEGFQHFESV------TRDYDINPTLEHFLG--IVDLYG 112
STF ++ G G +D F F + T D I ++ LG +DL+
Sbjct: 264 SPLAVSTFNKILEMYGKCGDMDSAFAVFNKMPKRNLTTWDTMIAWLAKNGLGEDAIDLFS 323
Query: 113 RLQK---IAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
+ ++ + +A+ FI A VV + +E L + KKD G
Sbjct: 324 QFKQAGLVPDAQLFIG--VFSACGVVGDVIE---------------GMLHFESMKKDYGI 366
Query: 170 MPYTEYVLRDLD 181
+P E+ + +D
Sbjct: 367 VPSMEHFVSIVD 378
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 62/85 (72%)
Query: 158 LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
++L ++ + GY+P TE+V DL++ KE+ + SERLA A+GL++T PG L + KNL
Sbjct: 574 MKLDSEMRKMGYIPKTEFVYHDLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIKNL 633
Query: 218 RICGECHNFIKKLSSIENREIIVRD 242
R+CG+CH+ IK +S I +REI+VRD
Sbjct: 634 RVCGDCHDAIKYMSKIADREIVVRD 658
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 14/194 (7%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
L L + KR E VRP+ +TF +++A G V+EG F + +Y I P +H +
Sbjct: 390 LSLFQEMKRNE---VRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVC 446
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD 166
IVDL R + EA + ++ + + L L LGE ++ L + D
Sbjct: 447 IVDLLARSGLVEEANGLVASLHSKPTISILVALLSGCLNNNKLELGESTAEKILELQPGD 506
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
G + ++ +L AK + +L +G P ++ I+ G H F
Sbjct: 507 VGVLA----LVSNLYAAAKNWYKVREVRKLMKDHGSKKAPGCSSIEIR------GALHTF 556
Query: 227 I-KKLSSIENREII 239
+ + S ++R+I+
Sbjct: 557 VMEDQSHPQHRQIL 570
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 61/85 (71%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K K+ GY+P ++ L D++ E KE+ +Y SERLA+A+GL+ST G + + KNLR+
Sbjct: 621 LGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLSTVEGSAITVMKNLRV 680
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CHN IK ++ I +REI+VRD +
Sbjct: 681 CGDCHNAIKLMAKIVDREIVVRDSS 705
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+GV P+ T G+++AC G + + F + + T+EH+ +VD+ GR ++
Sbjct: 444 EGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELE 503
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSS 157
EA + +M + A+S+VW L + L L + +++
Sbjct: 504 EAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAAN 542
>gi|190612757|gb|ACE80756.1| pentatricopeptide repeat protein [Nardia scalaris]
Length = 152
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 57/83 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+AGY+P T VL DL +E K Y SE+LA+AYGL+STPPG LRI KNLR+
Sbjct: 59 LTAQMKEAGYVPDTRQVLHDLAEEEKVSHLGYHSEKLAIAYGLMSTPPGTLLRIYKNLRV 118
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH K +S I R IIVRD
Sbjct: 119 CHDCHTATKFISKIVGRAIIVRD 141
>gi|222640613|gb|EEE68745.1| hypothetical protein OsJ_27435 [Oryza sativa Japonica Group]
Length = 461
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 105/266 (39%), Gaps = 77/266 (28%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF----- 104
+ A + GV P+ TF GV++AC G VDEGF+ F+ + +Y + P + H+
Sbjct: 129 ISAFEEMGRSGVAPDEQTFTGVLSACSHSGLVDEGFKFFDIMCYEYQLKPNVHHYGCMVD 188
Query: 105 -------------------------------LGIVDLYGRLQ------------KIAEAR 121
LG ++G + K +A
Sbjct: 189 LMGRAGLLDQAYELVVKDMRVAPDATIWRTLLGACRIHGHIDLGERVINHLIELKAQQAG 248
Query: 122 EFIRNMQIDASSVVWETL--------EKYAQTEPGLLLGEPSSSLR-------------- 159
+++ + A+ W + EK QT PG E + +
Sbjct: 249 DYVLLLNTYAAVEDWGKVAEVRKLMKEKGIQTTPGCTTVELNGEIHEFIAADASHPRKAE 308
Query: 160 -------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
++ + AGY+P L DLD E KE Y SE+LA+A+ L+ TP R +R
Sbjct: 309 IYEKLDEINKHLRIAGYVPNVSSELHDLDSEGKECALAYHSEKLAIAFALLVTPQHRPIR 368
Query: 213 IKKNLRICGECHNFIKKLSSIENREI 238
+ KNLR+C +CHNF K + + I
Sbjct: 369 LAKNLRVCVDCHNFTKDIKCLHTVNI 394
>gi|358357228|gb|AEU08454.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 149
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + ++AGY+P T +VL +DQE K+ S +LA+A+GLISTPPG L + KNLR
Sbjct: 58 RLSVQMEEAGYVPDTHFVLHHVDQEQKD---VSHSVKLAIAFGLISTPPGTPLHVIKNLR 114
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
ICGECH K +S I R I+VRD
Sbjct: 115 ICGECHTATKFISKIAGRAIVVRD 138
>gi|297733701|emb|CBI14948.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 58/80 (72%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K AGY+P T D +++ KE ++ SE+LA+A+GLI +PPG T+RI KNLR+C +CH
Sbjct: 306 KSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCH 365
Query: 225 NFIKKLSSIENREIIVRDKT 244
N K +S + NREI+VRD+T
Sbjct: 366 NATKLVSKVFNREIVVRDRT 385
>gi|297805646|ref|XP_002870707.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316543|gb|EFH46966.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 80/272 (29%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+A K FE + G+ P+ TF ++ AC G V+EG +FE++++ Y I P L+H+ +
Sbjct: 228 DAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCM 287
Query: 108 V----------DLYGRLQKIA-------------------------------------EA 120
V D YG ++++ +
Sbjct: 288 VDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDG 347
Query: 121 REFIRNMQIDASSVVWETLEKY--AQTEPGLLLGEPSSSLRLSNK--------------- 163
R +I I ++S +W+ + + GL+ S + NK
Sbjct: 348 RNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESE 407
Query: 164 -------------KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
K + G+ TE+VL D+D++ KE+ SE++A+A+GL+ P
Sbjct: 408 KIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKEEMINQHSEKIAMAFGLLVISPMEP 467
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+ I+KNLRICG+CH K +S IE R II+RD
Sbjct: 468 IIIRKNLRICGDCHETAKAISLIEKRRIIIRD 499
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 50/257 (19%)
Query: 35 PDIIE---LLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVITACGCFGAVDEGFQ 86
PD++ +L C L E G+R+ N+ G+ P + ++T G G +DE +
Sbjct: 388 PDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYD 447
Query: 87 HFESVTRDYDINPTLEHFLGIVDLYGR--LQKIA----------EAREFIRNMQIDASSV 134
+ + D + LG +YG L ++A A ++ I AS
Sbjct: 448 LINEMPFEPD-SCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKK 506
Query: 135 VWETLEKY--------AQTEPG------------LLLGEPSSSL---------RLSNKKK 165
+W+ + + + E G LL G+ S + +L+ +
Sbjct: 507 MWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMN 566
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
G+ P ++VL D++++ K+ SE+LAVA GLIST PG LR+ KNLRICG+CH
Sbjct: 567 RLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALGLISTRPGTPLRVIKNLRICGDCHE 626
Query: 226 FIKKLSSIENREIIVRD 242
+K +SS E REI VRD
Sbjct: 627 AMKFISSFEQREISVRD 643
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%)
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
+P+ TF V+ AC G +EG ++F + + + I+P +EH+ +V L GR K+ EA
Sbjct: 387 KPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAY 446
Query: 122 EFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
+ I M + S +W +L + +LL E ++ + +AG
Sbjct: 447 DLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAG 493
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 34/236 (14%)
Query: 21 VMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGA 80
++D L G+ ++ ++IE +++ D L W T V++AC
Sbjct: 406 MVDLLGRAGLVSEAIELIEGMHIAPDPVL---------------WGT---VLSACKTHNL 447
Query: 81 VDEGFQHFESVTRDYDINPTLE-HFLGIVDLYGRLQKIAEAREFIRNMQIDAS--SVVWE 137
VD G + ++ P + H++ + +Y + +K E RE + M + S W
Sbjct: 448 VDLGITVGNKLI---ELEPAHDGHYVLLASIYAKAKKWDEVREVRKLMSSRGTGKSAGWS 504
Query: 138 TLEKYAQTEPGLLLGE--PSSSLRLSN-------KKKDAGYMPYTEYVLRDLDQEAKEKP 188
+E L+G+ S+++ N + DAGY+P VL D+ E K
Sbjct: 505 LMEAQGNLHK-FLVGDMDHKDSVQIYNMLDMINRRLADAGYVPDVSSVLHDIGDEEKVHA 563
Query: 189 QTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
SERLA+AYG I T G +RI KNL++CG+CH F K ++ + NREIIVRD +
Sbjct: 564 IKVHSERLAIAYGFIVTEVGSPIRIVKNLQVCGDCHEFSKMVTKVFNREIIVRDGS 619
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
V A EV D + +F + I L + + +E RF ++G+ P TFVGV+ A
Sbjct: 314 VAVAREVFDGMPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNA 373
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G V EG ++F+ + Y I P +EH+ +VDL GR ++EA E I M I V
Sbjct: 374 CSRCGLVAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGMHIAPDPV 433
Query: 135 VWETLEKYAQTEPGLLLG 152
+W T+ +T + LG
Sbjct: 434 LWGTVLSACKTHNLVDLG 451
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 53/274 (19%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
AL+ + + + G D I +L+ C + L+E GK+ N G+ P + ++
Sbjct: 718 ALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMV 777
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTL---EHFLGIVDLYGRLQ--KIAEAREFIRNM 127
G G F ES + + + E LG ++G ++ + A + F
Sbjct: 778 DILGRAGK----FHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEP 833
Query: 128 QIDASSV----------VWETLE--------KYAQTEPGLLLGEPSSSLR---------- 159
+ID++ + +W+ + + + EPG E + +
Sbjct: 834 EIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHP 893
Query: 160 -----------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPG 208
L K GY P T++VL ++ K++ Y SERLA+A+ L+ST
Sbjct: 894 KIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTR 953
Query: 209 RTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+T+RI KNLRICG+CH+F+K +S I N+E++VRD
Sbjct: 954 KTIRIFKNLRICGDCHDFMKSISEITNQELVVRD 987
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 66/109 (60%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L+A + ++G P+ TF+GV++AC G ++EG +HF S+++ Y I PT+EH+ +
Sbjct: 717 KALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACM 776
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
VD+ GR K E FI M++ ++ ++WET+ + + GE ++
Sbjct: 777 VDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAA 825
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 50 LEAGKRFENDGVRP----NWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFL 105
LE RF N P W+T +++AC G ++ G ES+ +P L
Sbjct: 524 LEEAMRFINGMPFPPDAIGWTT---LLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLL 580
Query: 106 G-IVDLYGRLQKIAEAREFIRNMQI----DASSVVWE-TLEKY-AQTEPGLLLGEPSSSL 158
I G+ +A+ R +R + S + W+ L + A E L + + L
Sbjct: 581 SSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKL 640
Query: 159 R-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
L+NK D GY P T +V D+++ K K Y SERLA+A+GLI P G+ +R+ KNL
Sbjct: 641 EELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNL 700
Query: 218 RICGECHNFIKKLSSIENREIIVRD 242
R+C +CHN K +SS+ REI+VRD
Sbjct: 701 RVCVDCHNATKHISSVTGREILVRD 725
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++P+ T GVI+AC G V++G ++F+ +T +Y I P++ H+ ++DL+ R ++ E
Sbjct: 467 GLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEE 526
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE-PSSSLRLSNKKKDAGY 169
A FI M ++ W TL + + L +G+ + SL + AGY
Sbjct: 527 AMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY 577
>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
Length = 948
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
KKD GY+P T YVL D+ ++ KE+ Y SERLA+AYG ++TPPG+ LR+ KNLR+CG+C
Sbjct: 852 KKD-GYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVIKNLRVCGDC 910
Query: 224 HNFIKKLSSIENREIIVRD 242
H K + + REIIVRD
Sbjct: 911 HTASKLYAKVMQREIIVRD 929
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ L+ + + DGV P+ TFV ++TAC G + E ++F+ + DY + P +EH++ +
Sbjct: 662 RALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVAL 721
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
VD R + EA + IR + + + ++W L
Sbjct: 722 VDTVARKGYLQEAEDLIRMVPLQVNEIIWFAL 753
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLY--- 111
R + DG RP+ +T VGV+ AC G ++E + S+ D + E ++ +Y
Sbjct: 564 RMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKV 623
Query: 112 GRLQKIAEAREFIRNMQIDASSVVWET-LEKYAQTEPGLLLGEPSSS---LRLSNKKKDA 167
G +Q+ A + I N + A W T LE Y + LG+ ++S L+L+ +
Sbjct: 624 GSIQEACNAFDKIENPDVKA----WTTMLEAYCR------LGKYNASDRALKLARMMQQD 673
Query: 168 GYMP 171
G MP
Sbjct: 674 GVMP 677
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 104/212 (49%), Gaps = 26/212 (12%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHFLG 106
KL EA E VRPN + + ++ AC VD E V R +D++P H G
Sbjct: 361 KLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLA----EMVARALFDLDP---HNAG 413
Query: 107 -------IVDLYGRLQKIAEAREFIRN---MQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
I L G+ ++ R ++N +I SV+ + YA P +
Sbjct: 414 RYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDR--SHPQT 471
Query: 157 SL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
L RL ++ + GY P +VL D+D+E KE SE+LA+ +GL++ PG
Sbjct: 472 DLIYSELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSV 531
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI+KNLR+CG+CH K +S + REI+VRD
Sbjct: 532 IRIRKNLRVCGDCHTATKFISKVTGREIVVRD 563
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+P+ TFV +++AC G V EG++ F S+ RD+ + P EH+ +VD+ GR K+ EA
Sbjct: 306 VKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEA 365
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG--YMPYTEYVLR 178
+FI M + ++ VW L + + L E + +AG + Y Y L
Sbjct: 366 CDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILYNIYTLT 425
Query: 179 DLDQEA 184
+EA
Sbjct: 426 GKRKEA 431
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 12/214 (5%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
++ A +V D+++ + + I+ L + LE K E G+ P+ TFVGV+ A
Sbjct: 147 IRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYA 206
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G VDEGF +F+ + +Y I P +EH+ +VDL GR + +A EFI+NM + ++V
Sbjct: 207 CSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAV 266
Query: 135 VWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYV-LRDLDQEAKEKPQTYRS 193
VW TL L LGE + + L + K +G +YV L +L + ++
Sbjct: 267 VWRTLLGACTIHGHLALGEVARAQLLQLEPKHSG-----DYVLLSNLYASEQRWSDVHKV 321
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
R + G+ TP + ++ L H F+
Sbjct: 322 RRTMLREGVKKTPGHSLVELRNRL------HEFV 349
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+P+ VL D+++E KE +Y SE++A+A+ LI+T G +R+ KNLR+C +CH I
Sbjct: 376 GYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAI 435
Query: 228 KKLSSIENREIIVRDKT 244
K +S + +REI+VRD++
Sbjct: 436 KLISKVFDREIVVRDRS 452
>gi|218202317|gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indica Group]
Length = 563
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQE-AKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+ + K AGY+P T +VL D+D E KE SE+LA+A+GLIST PG +RI KNLR
Sbjct: 462 MCQQLKVAGYVPDTSHVLLDIDDEDVKESSLALHSEKLAIAFGLISTAPGTPIRIAKNLR 521
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CHN +K LS I R IIVRD
Sbjct: 522 VCGDCHNAVKLLSKIYGRCIIVRD 545
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 12/193 (6%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K LE R E G+ PN TF V+ AC G V+EG FE +T+ Y I P + H+ +
Sbjct: 274 KALELFARMEITGLVPNKITFNTVLNACSHGGFVEEGMGCFERMTKVYGIEPDIAHYGCM 333
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD- 166
VDL+ R +A + I+ M + + VW+ L +T LG + + + D
Sbjct: 334 VDLFCRAGLFDKAEKMIQMMPMKPDAAVWKALVGACKTHRNFELGRKAGHMLIEAAPNDH 393
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AGY+ + D + ++ +L + G+ P ++ I G H F
Sbjct: 394 AGYVLLSNIYALDGNWTG-----VHKVRKLMLDRGVQKVPGSSSIEID------GVIHEF 442
Query: 227 IKKLSSIENREII 239
I S ++E I
Sbjct: 443 ISGDKSHSSKEDI 455
>gi|222636482|gb|EEE66614.1| hypothetical protein OsJ_23194 [Oryza sativa Japonica Group]
Length = 412
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 34/234 (14%)
Query: 21 VMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGA 80
++D L G+ ++ ++IE +++ D L W T ++++C G
Sbjct: 153 MVDLLGRAGLVPEAIELIEGMHIAPDPVL---------------WGT---ILSSCKTHGL 194
Query: 81 VDEGFQHFESVTRDYDINPTLE-HFLGIVDLYGRLQKIAEAREFIRNMQIDAS--SVVWE 137
VD G + +++PT +++ + +Y + K E RE + M + S W
Sbjct: 195 VDLGVSVGNKLI---ELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWS 251
Query: 138 TLEKYAQTEPGLLLGEPSS--------SLRLSNKK-KDAGYMPYTEYVLRDLDQEAKEKP 188
+E + + L+G+ +L + NK+ +AGY+P VL D+ +E K
Sbjct: 252 LMEAHGKVHK-FLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLHDIGEEEKVHA 310
Query: 189 QTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
SERLA+AYG I G +RI KNLR+CG+CH F K ++ + REIIVRD
Sbjct: 311 VKVHSERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTMVFQREIIVRD 364
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 74/155 (47%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
V A EV D ++ +F + I L + +E +RF ++G+ P TFVGV+
Sbjct: 61 VAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNG 120
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G V EG ++F+ + Y I P +EH+ +VDL GR + EA E I M I V
Sbjct: 121 CSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPV 180
Query: 135 VWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
+W T+ +T + LG + + +GY
Sbjct: 181 LWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGY 215
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 76/260 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G P+ TF+ V+ AC G DE ++F + Y I+P EH+ ++D GR+ ++
Sbjct: 534 GFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQ 593
Query: 120 AREFIRNMQIDASSVVWETL---------EKYAQTEPGLLLG-EPSSS------------ 157
++ + M A ++W ++ ++ A+ L G EP+ +
Sbjct: 594 VQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYAR 653
Query: 158 -------------LRLSNKKKDAGY------------------MPYTEYVLRDLDQEAKE 186
+R +K++GY P + + +LD+ KE
Sbjct: 654 AGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKE 713
Query: 187 ------KPQT-----------------YRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
KP Y SERLA+A+ L++TP G +RI KNL C +C
Sbjct: 714 MDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDC 773
Query: 224 HNFIKKLSSIENREIIVRDK 243
H IK +S I NR+IIVRD
Sbjct: 774 HAVIKMISKIVNRDIIVRDS 793
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 108/198 (54%), Gaps = 26/198 (13%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLE--HFLGIVDLYGRL---QKI 117
PN + +ITAC G + G ES++++ + + +++ + ++Y +L +K
Sbjct: 395 PNQIIWRTIITACHATGELKLG----ESISKELIKSEPMHESNYVLLSNIYAKLRQWEKK 450
Query: 118 AEAREFI--RNMQ-IDASSVVWETLEKYAQTEPGLLLGEPSSSL---------RLSNKKK 165
+ RE + R M+ + S+++ E Y + G+ S + + K
Sbjct: 451 TKVREMMDMRGMKKVPGSTMIEVNNEMYE-----FVAGDKSHDQYKEIYEMVDEMGREIK 505
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
AGY+P T VL D+D+E KE SE+LA+A+ L++TPPG ++RI KNLR+C +CH+
Sbjct: 506 KAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCHS 565
Query: 226 FIKKLSSIENREIIVRDK 243
K +S + NREI+VRD+
Sbjct: 566 ATKFISKVYNREIVVRDR 583
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
Query: 26 KNIGIF--LDSPDIIELLNVCMDLKL----LEAGKRFEN---DGVRPNWSTFVGVITACG 76
K I +F +DS I+ +V L + L+A F+ +G+ P+ F+GV++AC
Sbjct: 281 KAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACS 340
Query: 77 CFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVW 136
G VD+G +F S+ R++ I P +EH+ +VDL R + EA EF++ M + + ++W
Sbjct: 341 HSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIW 400
Query: 137 ETLEKYAQTEPGLLLGEPSS 156
T+ L LGE S
Sbjct: 401 RTIITACHATGELKLGESIS 420
>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
Length = 948
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
R++ K GY+P T YVL D+ ++ KE+ Y SERLA+AYG ++TPPG+ LR+ KNLR
Sbjct: 846 RITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVIKNLR 905
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K + + REIIVRD
Sbjct: 906 VCGDCHTASKLYAKVMQREIIVRD 929
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ L+ + + DGV P+ TFV ++TAC G + E ++F+ + DY + P +EH++ +
Sbjct: 662 RALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVAL 721
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
VD R + EA + IR + + + ++W L
Sbjct: 722 VDTVARKGYLQEAEDLIRMVPLQVNEIIWFAL 753
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 17/124 (13%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLY--- 111
R + DG RP +T VGV+ AC G ++E + S+ D + E ++ +Y
Sbjct: 564 RMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKV 623
Query: 112 GRLQKIAEAREFIRNMQIDASSVVWET-LEKYAQTEPGLLLGEPSSS---LRLSNKKKDA 167
G +Q+ A + I N + A W T LE Y + LG+ ++S L+L+ +
Sbjct: 624 GSIQEACNAFDKIENPDVKA----WTTMLEAYCR------LGKYNASDRALKLARMMQQD 673
Query: 168 GYMP 171
G MP
Sbjct: 674 GVMP 677
>gi|190612751|gb|ACE80753.1| pentatricopeptide repeat protein [Metzgeria furcata]
Length = 152
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL N+ ++AGY P T +VL D+++E K SE+LA+AYGLISTPPG LRI KNLR
Sbjct: 58 RLYNQIEEAGYEPDTSFVLHDVEEEDKLSFLGNHSEKLAIAYGLISTPPGTPLRIFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S + R IIVRD
Sbjct: 118 VCGDCHMVTKFISKVVGRPIIVRD 141
>gi|190612859|gb|ACE80807.1| pentatricopeptide repeat protein [Pinus nigra]
Length = 152
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 61/85 (71%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS + + AGY+P T +VL D+++E KE + SE+LA+A+ LIST P ++ I KNLR+
Sbjct: 59 LSQQMEQAGYVPDTGFVLHDVEEEEKEHMLSTHSEKLAIAFALISTYPRTSIHITKNLRV 118
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CHN K +S I REIIVRDK+
Sbjct: 119 CGDCHNATKLISKIVKREIIVRDKS 143
>gi|190612891|gb|ACE80823.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + + AGY+P T +VL D+++E K + SE+LA+A+GLIST PG LRI KNLR
Sbjct: 58 RLSCQMEKAGYVPDTRFVLHDVEEEEKVLRLCHHSEKLAIAFGLISTAPGTPLRIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S IE REI+VRD
Sbjct: 118 VCVDCHTATKFMSKIEGREILVRD 141
>gi|125525852|gb|EAY73966.1| hypothetical protein OsI_01850 [Oryza sativa Indica Group]
Length = 641
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 13/142 (9%)
Query: 111 YGRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL---------RL 160
+G ++A+ R+ +++ I ++ W ++ T ++G+ S L L
Sbjct: 485 HGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHT---FIVGDKSHPLTKEIYAKLDEL 541
Query: 161 SNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRIC 220
+ AGY+P + L DLD+ KE ++ SERLAVA+ L+STPPG +R+KKNLRIC
Sbjct: 542 GDLMSKAGYVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRIC 601
Query: 221 GECHNFIKKLSSIENREIIVRD 242
+CH K +S I +REII+RD
Sbjct: 602 RDCHVAFKFISKIVSREIIIRD 623
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+LS + K GY P +VL+D++++ KE+ SE+LAV +GL++TPPG L++ KNLR
Sbjct: 657 KLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLR 716
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
ICG+CH IK +SS E REI VRD
Sbjct: 717 ICGDCHVVIKFISSFERREIFVRD 740
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
+ G +P+ +F V++AC G +EG +F S++ Y I +EH+ +V L R
Sbjct: 478 MQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAG 537
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
K+ +A IR M ++ + VW L + + LGE ++
Sbjct: 538 KLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAA 578
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCM----DLKLLEAGKRFEN 58
N+ + L R +V+++L + +LK+ G+ L+ ++ C D++ LE + +
Sbjct: 320 NAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQI 379
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEG-FQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
GV+PN T ++ ACG A+ G H S+ R + + ++D+Y + +I
Sbjct: 380 AGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGS--ALIDMYAKCGRI 437
Query: 118 AEAR 121
+R
Sbjct: 438 QASR 441
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 113/205 (55%), Gaps = 31/205 (15%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLE-HFLGIVDLYGR- 113
FE D V W +G AC + V+ E++ + ++P + H++ + ++Y +
Sbjct: 368 FEPDAV--IWRALLG---ACRIYKNVEVAE---EAMAKLRVLDPHADGHYVLLSNIYAQA 419
Query: 114 --LQKIAEAREFIRNMQIDA----SSVVWE-TLEKYAQ--------TEPGLLLGEPSSSL 158
+ +AE R +R +I SS+ W+ T+ ++ E +LGE
Sbjct: 420 NSWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIYKMLGE----- 474
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+ ++ + AGY P T VL+D+D+++KE+ SE+LAVA+GL++TP G TLRI KNLR
Sbjct: 475 -MMDRLRQAGYKPMTGLVLQDIDEQSKERALAEHSEKLAVAFGLLTTPAGSTLRITKNLR 533
Query: 219 ICGECHNFIKKLSSIENREIIVRDK 243
C +CH+ IK ++ + R++I+RD+
Sbjct: 534 ACEDCHSAIKLIALLYERKLIIRDR 558
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 34 SPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTR 93
S II L N L R ++G++PN TF+GV+ +C G V +G ++F S++
Sbjct: 273 SSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSV 332
Query: 94 DYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
+ + P ++H+ +VDL GR I EA++ IR+M + +V+W L + + + E
Sbjct: 333 VHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAE 392
Query: 154 PS-SSLRLSNKKKDAGYMPYTE-YVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
+ + LR+ + D Y+ + Y + + E +T R ER I PGR+
Sbjct: 393 EAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRRER-------IQRIPGRS 444
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AGY P T +L D+ E K++ +Y SE+LA+A+GLIST PG +LRI KNLR+CG+CH
Sbjct: 786 AGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTA 845
Query: 227 IKKLSSIENREIIVRD 242
K +S I REI+VRD
Sbjct: 846 TKFISKITGREIVVRD 861
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDY-DINPTLEHFLG 106
++L +R ++G PN TFV V++AC G V +G Q F S+ D+ I+P EH+
Sbjct: 590 QVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYC 649
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS-SLRLSNKKK 165
+VDL R K+ A +FI + V+ T+ ++ + S+ L +
Sbjct: 650 MVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDR 709
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
A Y+ VL +L E +K + + RL + P ++ +K+ +
Sbjct: 710 SAAYV-----VLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVH 757
>gi|358357210|gb|AEU08445.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + K+AGY P T +VL D++ E KE + SE+LA+A+GLISTP G +RI KNLR
Sbjct: 58 RLFRQMKEAGYQPDTRFVLHDVEDEQKELSLCHHSEKLAIAFGLISTPSGMPIRIIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I R ++VRD
Sbjct: 118 VCGDCHAATKFISKIVGRAVVVRD 141
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 61/85 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L ++ + GY+P T++VL D++ E KE + SE+LAV YG++ P G T+R+ KNLR
Sbjct: 681 QLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFKNLR 740
Query: 219 ICGECHNFIKKLSSIENREIIVRDK 243
ICG+CHN K +S + +REIIVRD+
Sbjct: 741 ICGDCHNAFKYISKVVDREIIVRDR 765
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+ P+ TF+ +++AC G V EG +F+++ Y I P +H+ ++DL R +EA
Sbjct: 507 ILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEA 566
Query: 121 REFIRNMQIDASSVVWETL 139
+ +M + + +WE L
Sbjct: 567 KNVTESMPFEPGAPIWEAL 585
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AGY P T +L D+ E K++ +Y SE+LA+A+GLIST PG +LRI KNLR+CG+CH
Sbjct: 786 AGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCHTA 845
Query: 227 IKKLSSIENREIIVRD 242
K +S I REI+VRD
Sbjct: 846 TKFISKITGREIVVRD 861
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDY-DINPTLEHFLG 106
++L +R ++G PN TFV V++AC G V +G Q F S+ D+ I+P EH+
Sbjct: 590 QVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYC 649
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS-SLRLSNKKK 165
+VDL R K+ A +FI + V+ T+ ++ + S+ L +
Sbjct: 650 MVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDR 709
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
A Y+ VL +L E +K + + RL + P ++ +K+ +
Sbjct: 710 SAAYV-----VLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVH 757
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 118/266 (44%), Gaps = 45/266 (16%)
Query: 22 MDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR-----PNWSTFVGVITACG 76
M + +GI D I LL C L++ G+R+ N R P+ + ++ G
Sbjct: 213 MQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLG 272
Query: 77 CFGAVDEGFQHFES------------------VTRDYDINPTLEHFLGIVDLYGRLQKIA 118
G +DE Q + + RD + L ++ + +
Sbjct: 273 RAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVL 332
Query: 119 EAREFIRNMQID-ASSVVWETLEKYAQTEPG------------LLLGEPSSSL------- 158
+ + N++ D A+ V EK Q PG L+G+ L
Sbjct: 333 LSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAK 392
Query: 159 --RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKN 216
L+ K K AGY+P T++VL D+++E KE SE+LA+A+GLIS P +R+ KN
Sbjct: 393 LDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKN 452
Query: 217 LRICGECHNFIKKLSSIENREIIVRD 242
LR+CG+CH IK +SSI REI VRD
Sbjct: 453 LRVCGDCHMAIKLISSITGREITVRD 478
>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 109/260 (41%), Gaps = 77/260 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV P+ TFV +++ C G + G FE + ++ ++P LEH+ +VD+ GR KI E
Sbjct: 440 GVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKE 499
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE-------------PSSSLRLSN---- 162
A + I M S+ +W +L + + +GE P + + +SN
Sbjct: 500 AVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYAD 559
Query: 163 ------------------KKKDAG------------YMPYTEYVLRDLD---------QE 183
KK+AG ++ Y R+ D QE
Sbjct: 560 AKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQE 619
Query: 184 AKEK----PQTY-----------------RSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
A EK P T SERLA Y LI T G +RI KNLR+C +
Sbjct: 620 AIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCAD 679
Query: 223 CHNFIKKLSSIENREIIVRD 242
CH+++K +S + R I++RD
Sbjct: 680 CHSWMKIVSQVTRRVIVLRD 699
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 54/276 (19%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
+AA+E+ +++K G + + +L C L++ G+++ ++ G+ P +
Sbjct: 405 QAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGT 464
Query: 71 VITACGCFGAVDEGFQHFESVTRDYDINPTLEHF---LGIVDLYGRLQKIAEAREFIRNM 127
++ G G +DE + S ++ I P + + LG L+ ++ E+ + I +
Sbjct: 465 MVDLLGRAGKLDEAW----SFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFEL 520
Query: 128 ------------QIDASSVVWETLEKY--AQTEPGLLLGEPSSSLRLSNKK--------- 164
I A++ +W+ + + A + GL S ++L N+
Sbjct: 521 GPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTN 580
Query: 165 ------------------KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTP 206
KD GY+P T+ + D++ + K + SE+LA+AYGLI T
Sbjct: 581 HQHAKDIYARLAKLIEEIKDMGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTA 639
Query: 207 PGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
PG T++IKKNLR+C +CHN K +S + REII+RD
Sbjct: 640 PGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRD 675
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 53/289 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----E 57
N+ L R + AL V + +K G+ D ++ +L+ C LL+ G + +
Sbjct: 464 NTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK 523
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP---TLEHFLGIVDLYGRL 114
+ GV P + +I G G ++E + + R+ P + LG ++G
Sbjct: 524 DYGVIPTSKHYTCMIDLLGRAGRLEEA----QDLIRNMPFQPGAASWGALLGASRIHGNT 579
Query: 115 QKIAEAREFIRNMQ------------IDASSVVWETLEKY--------AQTEPGLLLGEP 154
+ +A E + M+ + A+S W +K Q PG E
Sbjct: 580 ELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEV 639
Query: 155 SSSLR---------------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
+ + L K ++ GY+ T+ VL D+++E KE Y S
Sbjct: 640 QNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHS 699
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
E+LAVA+G+++ P GR +R+ KNLR+C +CH+ IK +S I R II+RD
Sbjct: 700 EKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRD 748
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 26/189 (13%)
Query: 79 GAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE-----AREFIRNMQID--- 130
G +D G ++F + +Y + PT +H+ ++DL GR+ ++ E A N ++
Sbjct: 778 GLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEGALLGASRIHGNTELGEKA 837
Query: 131 ---------ASSVVWETLEKYAQTEPGLLLGEP-------SSSLRLSNKKKDAGYMPYTE 174
+S + + + Q PG E S L LS ++++ G++ +
Sbjct: 838 AQMFFKMGPQNSGISKMRDVGVQKVPGYSWFEVQNKIHTFSVGLFLSRERENIGFLEELD 897
Query: 175 YVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI-KKNLRICGECHNFIKKLSSI 233
+R+ ++E + + Y SE LA A G+++ P GR R+ KK + +C +C + IK +S I
Sbjct: 898 LKMREREEEKERTLK-YLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKI 956
Query: 234 ENREIIVRD 242
R I +RD
Sbjct: 957 VGRLITLRD 965
>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 109/260 (41%), Gaps = 77/260 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV P+ TFV +++ C G + G FE + ++ ++P LEH+ +VD+ GR KI E
Sbjct: 433 GVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKE 492
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE-------------PSSSLRLSN---- 162
A + I M S+ +W +L + + +GE P + + +SN
Sbjct: 493 AVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYAD 552
Query: 163 ------------------KKKDAG------------YMPYTEYVLRDLD---------QE 183
KK+AG ++ Y R+ D QE
Sbjct: 553 AKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQE 612
Query: 184 AKEK----PQTY-----------------RSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
A EK P T SERLA Y LI T G +RI KNLR+C +
Sbjct: 613 AIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCAD 672
Query: 223 CHNFIKKLSSIENREIIVRD 242
CH+++K +S + R I++RD
Sbjct: 673 CHSWMKIVSQVTRRVIVLRD 692
>gi|23617093|dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 681
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 34/234 (14%)
Query: 21 VMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGA 80
++D L G+ ++ ++IE +++ D L W T ++++C G
Sbjct: 422 MVDLLGRAGLVPEAIELIEGMHIAPDPVL---------------WGT---ILSSCKTHGL 463
Query: 81 VDEGFQHFESVTRDYDINPTLE-HFLGIVDLYGRLQKIAEAREFIRNMQIDAS--SVVWE 137
VD G + +++PT +++ + +Y + K E RE + M + S W
Sbjct: 464 VDLGVSVGNKLI---ELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWS 520
Query: 138 TLEKYAQTEPGLLLGEPSS--------SLRLSNKK-KDAGYMPYTEYVLRDLDQEAKEKP 188
+E + + L+G+ +L + NK+ +AGY+P VL D+ +E K
Sbjct: 521 LMEAHGKVHK-FLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLHDIGEEEKVHA 579
Query: 189 QTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
SERLA+AYG I G +RI KNLR+CG+CH F K ++ + REIIVRD
Sbjct: 580 VKVHSERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTMVFQREIIVRD 633
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
V A EV D ++ +F + I L + +E +RF ++G+ P TFVGV+
Sbjct: 330 VAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNG 389
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G V EG ++F+ + Y I P +EH+ +VDL GR + EA E I M I V
Sbjct: 390 CSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPV 449
Query: 135 VWETLEKYAQTEPGLLLG 152
+W T+ +T + LG
Sbjct: 450 LWGTILSSCKTHGLVDLG 467
>gi|190612849|gb|ACE80802.1| pentatricopeptide repeat protein [Isoetes velata]
Length = 152
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 21/135 (15%)
Query: 129 IDASSVVWETLEKYAQTEPG------------LLLGEPS--------SSLRLSNKKKDA- 167
+D + + +E+ + EPG L+G+ S + L+L N + DA
Sbjct: 7 VDVARIRKLMVERGIKKEPGCSSIEIGNQVHTFLIGDNSHPMKEAIYARLKLLNTQLDAC 66
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+P T VL DLD+E KE Y SE+LA+++GL+ST G LRI KNLR+C +CH
Sbjct: 67 GYVPDTSSVLHDLDEETKETLLGYHSEKLAISFGLLSTSSGTPLRIVKNLRVCADCHTVT 126
Query: 228 KKLSSIENREIIVRD 242
K +S IE R+II+RD
Sbjct: 127 KLISKIEGRQIIMRD 141
>gi|190612775|gb|ACE80765.1| pentatricopeptide repeat protein [Porella platyphylla]
Length = 152
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS GY+P T+YVL D+++E K + SE+LA+A+GLISTPPG +RI KNLR
Sbjct: 58 RLSELMTAVGYVPDTQYVLHDVEEEEKVSRLSLHSEKLAIAFGLISTPPGTPIRIFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K ++ I R IIVRD
Sbjct: 118 VCGDCHTATKFIAKIVGRTIIVRD 141
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 53/289 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----E 57
N+ L R + AL V + +K G+ D ++ +L+ C LL+ G + +
Sbjct: 464 NTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK 523
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF---LGIVDLYGRL 114
+ GV P + +I G G ++E + + R+ P + LG ++G
Sbjct: 524 DYGVIPTSKHYTCMIDLLGRAGRLEEA----QDLIRNMPFQPGAASWGALLGASRIHGNT 579
Query: 115 QKIAEAREFIRNMQ------------IDASSVVWETLEKY--------AQTEPGLLLGEP 154
+ +A E + M+ + A+S W +K Q PG E
Sbjct: 580 ELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEV 639
Query: 155 SSSLR---------------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
+ + L K ++ GY+ T+ VL D+++E KE Y S
Sbjct: 640 QNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHS 699
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
E+LAVA+G+++ P GR +R+ KNLR+C +CH+ IK +S I R II+RD
Sbjct: 700 EKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRD 748
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 124/273 (45%), Gaps = 48/273 (17%)
Query: 18 ALEVMDKLKNI-GIFLDSPDIIELLNVCMDLKLLEAGKR-FENDG----VRPNWSTFVGV 71
AL + ++++ I G+ I L C L+ G R FE+ G ++P + +
Sbjct: 344 ALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCL 403
Query: 72 ITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDA 131
++ G G + ++ +++ D D + LG L+G E E++ + I
Sbjct: 404 VSLLGRAGQLKRAYETIKNMNMDAD-SVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKN 462
Query: 132 SSV------VWETL--------------EKYAQTEPGLLLGEPSSSL------------- 158
S + ++ ++ EK EPG+ E + +
Sbjct: 463 SGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKS 522
Query: 159 --------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
++S + K GY+P T VL+DL++ KE+ SERLA+AYGLIST PG
Sbjct: 523 KEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSP 582
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
L+I KNLR+C +CH K +S I R+I++RD+
Sbjct: 583 LKIFKNLRVCSDCHTVTKLISKITGRKIVMRDR 615
>gi|190612767|gb|ACE80761.1| pentatricopeptide repeat protein [Pellia epiphylla]
Length = 152
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L K ++ GY+P T +VLRD+ +E KE + SE+LA+A+GL++TPPG LRI K+LR
Sbjct: 58 KLFKKMREVGYVPDTRFVLRDVTEEEKETQLYHHSEKLAIAFGLMNTPPGTPLRIFKSLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I R IIVRD
Sbjct: 118 VCGDCHTATKFISKIVQRVIIVRD 141
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 52/288 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF----EN 58
N+ LK + + +E+ ++K G+ + + +LN C L++ GK + +
Sbjct: 287 NAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKE 346
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPT------------------ 100
+ P + ++ G G ++E + + + I+PT
Sbjct: 347 SRIEPTDKHYASLVDMLGRAGKLEEALE----IVTNMPIDPTESVWGALLTSCTIHKNTE 402
Query: 101 LEHF----------------LGIVDLY---GRLQKIAEAREFIRNM-QIDASSVVW-ETL 139
L F + + + Y GR + A+AR+ +R+ + + + W E
Sbjct: 403 LAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEER 462
Query: 140 EKYAQTEPGLLLGEPSSSL-----RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSE 194
K G E S + L + + AGY+ T YVLR++D + K + Y SE
Sbjct: 463 NKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVADTSYVLREVDGDEKNQTIRYHSE 522
Query: 195 RLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
RLA+A+GLI+ P R +R+ KNLR+CG+CHN IK +S R IIVRD
Sbjct: 523 RLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSICTRRVIIVRD 570
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 13/132 (9%)
Query: 14 EVKAALEVMDK--LKNIGIFLDSPDIIELLNVCMD----LKLLEAGKRFENDGVRPNWST 67
+++ A +V D+ ++N+GI+ +L C K++E KR + G++PN+ T
Sbjct: 267 DLEGAYQVFDEVPMRNLGIW------NAMLKACAQHSHTQKVIELFKRMKLSGMKPNFIT 320
Query: 68 FVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNM 127
F+ V+ AC G VDEG +F+ + ++ I PT +H+ +VD+ GR K+ EA E + NM
Sbjct: 321 FLNVLNACSHAGLVDEGKYYFD-LMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNM 379
Query: 128 QIDASSVVWETL 139
ID + VW L
Sbjct: 380 PIDPTESVWGAL 391
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 13/141 (9%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL---------RLS 161
G ++A+ R+ +++ I ++ W ++ T ++G+ S + L
Sbjct: 629 GMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHT---FIVGDKSHPMTKEIYSKLDELG 685
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+ AGY+P + L DLD+ KE ++ SERLAVA+ L+STPPG +R+KKNLRIC
Sbjct: 686 DLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICR 745
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH K +S+I +REII+RD
Sbjct: 746 DCHMAFKFISNIVSREIIIRD 766
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ LE R ++G+ PN T V+ AC G VDE ++F S+ + I+ T EH+ +
Sbjct: 496 RALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCM 555
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+DL GR K+ +A E + +M A++ VW L
Sbjct: 556 IDLLGRAGKLDDAMELVNSMPFQANASVWGAL 587
>gi|190612913|gb|ACE80834.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + ++AGY+P T +VL D+D+E K + SE+LA+A+GL+ST PG LRI KNLR
Sbjct: 58 RLSQQMEEAGYVPDTRFVLHDVDEEEKLNRLCHHSEKLAIAFGLLSTVPGTPLRIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ I REI+VRD
Sbjct: 118 VCVDCHTATKFMAKIAAREIVVRD 141
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 34/236 (14%)
Query: 21 VMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGA 80
++D L G+ ++ ++IE +++ D L W T ++++C G
Sbjct: 422 MVDLLGRAGLVPEAIELIEGMHIAPDPVL---------------WGT---ILSSCKTHGL 463
Query: 81 VDEGFQHFESVTRDYDINPTLE-HFLGIVDLYGRLQKIAEAREFIRNMQIDAS--SVVWE 137
VD G + +++PT +++ + +Y + K E RE + M + S W
Sbjct: 464 VDLGVSVGNKLI---ELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWS 520
Query: 138 TLEKYAQTEPGLLLGEPSS--------SLRLSNKK-KDAGYMPYTEYVLRDLDQEAKEKP 188
+E + + L+G+ +L + NK+ +AGY+P VL D+ +E K
Sbjct: 521 LMEAHGKVHK-FLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLHDIGEEEKVHA 579
Query: 189 QTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
SERLA+AYG I G +RI KNLR+CG+CH F K ++ + REIIVRD +
Sbjct: 580 VKVHSERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTMVFQREIIVRDGS 635
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
V A EV D ++ +F + I L + +E +RF ++G+ P TFVGV+
Sbjct: 330 VAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNG 389
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G V EG ++F+ + Y I P +EH+ +VDL GR + EA E I M I V
Sbjct: 390 CSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPV 449
Query: 135 VWETLEKYAQTEPGLLLG 152
+W T+ +T + LG
Sbjct: 450 LWGTILSSCKTHGLVDLG 467
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 76/260 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G P+ TF+ V+ AC G DE ++F + Y I+P EH+ ++D GR+ ++
Sbjct: 534 GFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQ 593
Query: 120 AREFIRNMQIDASSVVWETL---------EKYAQTEPGLLLG-EPSSS------------ 157
++ + M A ++W ++ ++ A+ L G EP+ +
Sbjct: 594 VQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYAR 653
Query: 158 -------------LRLSNKKKDAGY------------------MPYTEYVLRDLDQEAKE 186
+R +K++GY P + + +LD+ KE
Sbjct: 654 AGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKE 713
Query: 187 ------KPQT-----------------YRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
KP Y SERLA+A+ L++TP G +RI KNL C +C
Sbjct: 714 MDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDC 773
Query: 224 HNFIKKLSSIENREIIVRDK 243
H IK +S I NR+IIVRD
Sbjct: 774 HAVIKMISKIVNRDIIVRDS 793
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 57/77 (74%)
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
+AGY+P T Y L+D D+E KE SER+A+A+GLI+ P G T+RI KNLR+CG+CH+
Sbjct: 844 EAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCHS 903
Query: 226 FIKKLSSIENREIIVRD 242
F K +S + R+I++RD
Sbjct: 904 FFKFVSGVLGRKIVLRD 920
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV+PN +FV +++AC G VDEG ++ S+T Y I P +EH + ++DL GR ++ E
Sbjct: 662 GVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVE 721
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS-NKKKDAGYMPYT 173
A FI M I + +VW +L + L LG ++ L + D+ Y+ Y+
Sbjct: 722 AEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYS 776
>gi|361068227|gb|AEW08425.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 62/83 (74%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+AGY+P T++VL D+++E K+ + SE+LA+A+GLI+TPP ++ + KNLR+
Sbjct: 56 LAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLINTPPWTSITVTKNLRV 115
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH K +S + REII+RD
Sbjct: 116 CGDCHGATKFISKVVGREIIMRD 138
>gi|224074129|ref|XP_002304264.1| predicted protein [Populus trichocarpa]
gi|222841696|gb|EEE79243.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 60/283 (21%)
Query: 13 REVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG----KRFEND-GVRPNWST 67
RE A E M K+ G+ D +L+ C + L++ G R + G+ PN
Sbjct: 210 REAIGAFEEMLKM---GVLPDDLTFTGVLSACSNCGLVDKGMIIFARMSKEFGIVPNIHH 266
Query: 68 FVGVITACGCFGAVDEGFQHFES--VTRDYDINPTL-------------EHFL-GIVDLY 111
+ ++ G G + + +Q S V D I TL EH + +++L
Sbjct: 267 YGCMVDLLGRAGQLHQAYQLIMSMRVKPDSTIWRTLLGACRIHRNVILGEHVVEHLIEL- 325
Query: 112 GRLQKIAEAREFIRNMQIDASSVVWET---LEKYAQTEPGLLLGEPSSSLRL-------- 160
K EA +++ + +S W+ L K+ + E G+ SSS+ L
Sbjct: 326 ----KAQEAGDYVLLFNLYSSVDNWKKVTELRKFMK-EKGIQTTPASSSIELKGKVHEFV 380
Query: 161 ----SNKKKD---------------AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYG 201
S+ +KD AGY+ L +LD E K +Y SE+LA+A+G
Sbjct: 381 VDDVSHPQKDEIYEMLDEISKQLKIAGYVAEITSELPNLDAEEKRYVLSYHSEKLAIAFG 440
Query: 202 LISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
+++TPPG T+RI KNLRIC +CHNF K LS + NR++I+ D T
Sbjct: 441 VLATPPGTTIRIAKNLRICVDCHNFAKILSGVYNRQVIITDHT 483
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 125/288 (43%), Gaps = 52/288 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF----EN 58
NS L + K A+ ++++ +GI + + +L C LL+ G + +
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPT---LEHFLGIVDLYGRLQ 115
DG+ P +V V+ G G ++ + E + I PT + L ++ +
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP----IEPTAAIWKALLNACRMHKNTE 447
Query: 116 KIAEAREFIRNMQID------------ASSVVW--------ETLEKYAQTEPGLLLGEPS 155
A A E + + D AS W + E + EP E
Sbjct: 448 LGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIE 507
Query: 156 SSLRLS---------------------NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSE 194
+++ + K K+ GY+P T +V+ +DQ+ +E Y SE
Sbjct: 508 NAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSE 567
Query: 195 RLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
++A+A+ L++TPPG T+ IKKN+R+CG+CH IK S + REIIVRD
Sbjct: 568 KIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRD 615
>gi|302809831|ref|XP_002986608.1| hypothetical protein SELMODRAFT_124337 [Selaginella moellendorffii]
gi|300145791|gb|EFJ12465.1| hypothetical protein SELMODRAFT_124337 [Selaginella moellendorffii]
Length = 487
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 108/261 (41%), Gaps = 77/261 (29%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+GV + ++F+ V+ AC G ++ + HF+ + D+D+ P E++ +VDL R ++
Sbjct: 209 EGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARSGRLG 268
Query: 119 EAREFIRNMQIDASSVVWET----------LEKYAQTEPGLLLGEPS--------SSLRL 160
+A E + +M ++ W T LE A EP SSL
Sbjct: 269 DADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLLSSLYS 328
Query: 161 SNKKKD----------------------------------AG--YMPYTEYVLRDLD--- 181
+ KKD AG P T+ +LR+LD
Sbjct: 329 ATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQTDKILRELDILN 388
Query: 182 --------------------QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
E KE+ SE+LAVA+GLIST G L + KNLR+C
Sbjct: 389 VELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKNLRVCS 448
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH IK +S + +R I VRD
Sbjct: 449 DCHAAIKLISKLRSRVITVRD 469
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 125/288 (43%), Gaps = 52/288 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF----EN 58
NS L + K A+ ++++ +GI + + +L C LL+ G + +
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPT---LEHFLGIVDLYGRLQ 115
DG+ P +V V+ G G ++ + E + I PT + L ++ +
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP----IEPTAAIWKALLNACRMHKNTE 447
Query: 116 KIAEAREFIRNMQID------------ASSVVW--------ETLEKYAQTEPGLLLGEPS 155
A A E + + D AS W + E + EP E
Sbjct: 448 LGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIE 507
Query: 156 SSLRLS---------------------NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSE 194
+++ + K K+ GY+P T +V+ +DQ+ +E Y SE
Sbjct: 508 NAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSE 567
Query: 195 RLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
++A+A+ L++TPPG T+ IKKN+R+CG+CH IK S + REIIVRD
Sbjct: 568 KIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRD 615
>gi|383165810|gb|AFG65809.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 62/83 (74%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+AGY+P T++VL D+++E K+ + SE+LA+++GLISTPP ++ + KNLR+
Sbjct: 56 LAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAISFGLISTPPWTSITVTKNLRV 115
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH K +S + REII+RD
Sbjct: 116 CGDCHRATKFISKVVGREIIMRD 138
>gi|357521583|ref|XP_003631080.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525102|gb|AET05556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 76/250 (30%)
Query: 69 VGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF------------------------ 104
VGV+ AC G D G ++F S+++DY I P +H+
Sbjct: 553 VGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAHNLMRNMP 612
Query: 105 -----------LGIVDLYGRLQKIAEAREFIRNMQIDASSV------VWETLEKYA---- 143
LG ++G + +A E + NM+ + + + ++ TL K+
Sbjct: 613 FEPDAATWGALLGASRIHGNAELGEKAAEMVFNMEPNNAGMYVLLSNLYATLGKWVDVGK 672
Query: 144 ----------QTEPGLLLGEPSSSLR---------------------LSNKKKDAGYMPY 172
Q PG E + + + K K G++
Sbjct: 673 LRLKMRQLGIQKIPGYSWVEVQNKIHKFTVGDCFHPEKDRIYAYLEEIDLKMKHEGHVSL 732
Query: 173 TEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSS 232
+ VL D+++E K++ Y SE+LAVA+G+++ P GR +R+ KNLR+C +CHN IK +S
Sbjct: 733 VKLVLHDVEEEEKKRMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCEDCHNVIKYISK 792
Query: 233 IENREIIVRD 242
I R II+RD
Sbjct: 793 IVGRLIILRD 802
>gi|302794404|ref|XP_002978966.1| hypothetical protein SELMODRAFT_109758 [Selaginella moellendorffii]
gi|300153284|gb|EFJ19923.1| hypothetical protein SELMODRAFT_109758 [Selaginella moellendorffii]
Length = 318
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS K+AGY+P T VLR ++++ KE + SE+LA+ GLISTPPG TLR+ KNLR
Sbjct: 217 RLSVLMKEAGYVPDTTEVLRLVNEDEKESLLFFHSEKLAITCGLISTPPGTTLRVVKNLR 276
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH+ K +S I R+IIVRD
Sbjct: 277 VCSDCHSATKFISKITRRKIIVRD 300
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ L+A DG+ P+ TF +++AC G + GF HF+ + D+ I PT++HF +
Sbjct: 29 RALDAFLAMNVDGLFPDAVTFKSILSACSHAGLFEHGFFHFDLLVHDFGIAPTMDHFKCM 88
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VDL GR ++ EA E ++ M V W TL + + G+ ++ + L +
Sbjct: 89 VDLLGRSGRLLEAEELVQTMPFVPDDVTWNTLLAACRVHKSVERGKRAAEMLLELTSEIP 148
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
GY +L ++ A + + + L A G+ P T+ I
Sbjct: 149 GYY----VLLSNIHAAAGDHAEKAKVRDLMEARGVRKKPGWSTIEI 190
>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g52630
gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
Length = 588
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 52/288 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF----EN 58
N+ LK + + +E+ ++K G+ + + +LN C L++ G+ + +
Sbjct: 287 NAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKE 346
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPT------------------ 100
+ P + ++ G G + E + V + I+PT
Sbjct: 347 SRIEPTDKHYASLVDMLGRAGRLQEALE----VITNMPIDPTESVWGALLTSCTVHKNTE 402
Query: 101 LEHF----------------LGIVDLY---GRLQKIAEAREFIRNM-QIDASSVVW-ETL 139
L F + + + Y GR + A+AR+ +R+ + + + W E
Sbjct: 403 LAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEER 462
Query: 140 EKYAQTEPGLLLGEPSSSL-----RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSE 194
K G E S + L + + AGY+ T YVLR++D + K + Y SE
Sbjct: 463 NKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSE 522
Query: 195 RLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
RLA+A+GLI+ P R +R+ KNLR+CG+CHN IK +S R IIVRD
Sbjct: 523 RLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRD 570
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 13/141 (9%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL---------RLS 161
G ++A+ R+ +++ I ++ W ++ T ++G+ S + L
Sbjct: 722 GMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHT---FIVGDKSHPMTKEIYSKLDELG 778
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+ AGY+P + L DLD+ KE ++ SERLAVA+ L+STPPG +R+KKNLRIC
Sbjct: 779 DLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICR 838
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH K +S+I +REII+RD
Sbjct: 839 DCHMAFKFISNIVSREIIIRD 859
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ LE R ++G+ PN T V+ AC G VDE ++F S+ + I+ T EH+ +
Sbjct: 589 RALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCM 648
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+DL GR K+ +A E + +M A++ VW L
Sbjct: 649 IDLLGRAGKLDDAMELVNSMPFQANASVWGAL 680
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 16/207 (7%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+L EA N P+ + ++++C G ++ G +S+ NP ++ +
Sbjct: 523 RLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPA--SYVLL 580
Query: 108 VDLY---GRLQKIAEAREFIRNMQI-DASSVVW-------ETLEKYAQTEPGLLLGEPSS 156
LY G+ K+A+ R +R+ ++ W Q+ P LG+ +
Sbjct: 581 SSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSP--FLGQIYA 638
Query: 157 SL-RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKK 215
L +L+ K + GY+P VL D+++ K K + SE+LA+A+GLI PPG +R+ K
Sbjct: 639 ELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIK 698
Query: 216 NLRICGECHNFIKKLSSIENREIIVRD 242
NLR+CG+CHN K +S I REI+VRD
Sbjct: 699 NLRVCGDCHNATKFISKITQREILVRD 725
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 61/103 (59%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+R G++P+ TF+GV++AC G V++G Q+FES+ +++ I P ++H I+DL GR
Sbjct: 461 ERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGR 520
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
++ EAR FI NM V W TL + + +G+ ++
Sbjct: 521 AGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAA 563
>gi|218197718|gb|EEC80145.1| hypothetical protein OsI_21946 [Oryza sativa Indica Group]
Length = 603
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 92/184 (50%), Gaps = 6/184 (3%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
VRPN T ++AC GA+ G + + + D+ P +V + +K+ +
Sbjct: 410 VRPNPITISSTLSACAQLGALSLG-KWLHRIIAEEDLEPNQYSEAAVVRQEAKSRKLVKT 468
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDL 180
+ + V + Q+E E +L+ K +AGY P TE L D+
Sbjct: 469 PGYTLIEISNKPHVFMAGDRAHPQSEAIYSYLE-----KLTAKMIEAGYRPETEAALYDV 523
Query: 181 DQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIV 240
++E KE SE+LA+A+GL+ST PG +RI KNLR+C +CHN K +S + R I+V
Sbjct: 524 EEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVV 583
Query: 241 RDKT 244
RD +
Sbjct: 584 RDAS 587
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 121/275 (44%), Gaps = 53/275 (19%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEN-----DGVRPNWSTFVGVI 72
A++ K++ G+ I LL C L+E G+R+ + DG+ P + ++
Sbjct: 359 AIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMV 418
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINP---TLEHFLGIVDLYGRLQKIAEAREFIRNM-- 127
G G +DE E + I P + LG + G ++ + +M
Sbjct: 419 DLLGRSGLLDEA----EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVP 474
Query: 128 ----------QIDASSVVWETL--------EKYAQTEPGLLL---------------GEP 154
+ AS W + EK + +PG L P
Sbjct: 475 HDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHP 534
Query: 155 SSS------LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPG 208
+ + +S+K + AGY P T VL +L++E KE Y SE++A A+GLIST PG
Sbjct: 535 KAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPG 594
Query: 209 RTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
+ +RI KNLRIC +CH+ IK +S + R+I VRD+
Sbjct: 595 KPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDR 629
>gi|357139833|ref|XP_003571481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Brachypodium distachyon]
Length = 617
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L + K GY+P ++ L D+D+ K + SE+LA+A+GL+ST PG TLRI KNLR
Sbjct: 516 QLEERMKAMGYVPDLDFALHDVDESLKVQMLMRHSEKLAIAFGLLSTAPGITLRIFKNLR 575
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+CG+CH K +S IE+REII+RD T
Sbjct: 576 VCGDCHTAAKLISKIEDREIILRDTT 601
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
+E ++ ++ GV PNW TFV V+TAC G D G Q FE + Y I ++H+ +VD
Sbjct: 331 IELFEKMKSQGVEPNWITFVAVLTACIHTGMCDFGMQCFERMQEVYGIEARVDHYSCMVD 390
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
L R + A IR+M + TL ++ + E ++ + ++AG
Sbjct: 391 LLCRAGSLERAVSLIRSMPFQPHPSAYGTLLNASRVYKNMEFAEFAAGKLIEQNPQNAG- 449
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTP 206
Y + L ++ A + R R ++ TP
Sbjct: 450 -AYVQ--LANIYAVANQWADVSRVRRWMKDNAVVKTP 483
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ + K GY P T VL D+ +E KE SERLA+A+GLI+TPP L+I KNLR+
Sbjct: 774 MTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKNLRV 833
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH +K +S IE+REII+RD
Sbjct: 834 CGDCHMVMKMVSLIEDREIIMRD 856
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+ ++ E G+ + +TF+ VI C G V EG Q+F+S+ D++I+PT+EH+ +VD
Sbjct: 588 LDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVD 647
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLG 152
LY R K+ E I M A ++VW TL + + LG
Sbjct: 648 LYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELG 690
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIVDLYGR 113
R +GV PN TF V++A GAVD G + H +SV + T+ ++++Y +
Sbjct: 191 RMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSV--KFGCRSTVFVCNSLINMYSK 248
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
+ EA+ R M+ V W TL GLLL E
Sbjct: 249 CGLVEEAKAVFRQMETR-DMVSWNTL------MAGLLLNE 281
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + + +GY+P T VLRD+D+E K + SERLA+A+GL++TP G +RI KNLR+
Sbjct: 705 LRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRV 764
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH K +S I REIIVRD
Sbjct: 765 CGDCHTVTKYISKIVKREIIVRD 787
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 4/148 (2%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+G++PN +TF+ +++AC V++G F S+ RD++I P +H+ +VDL R +
Sbjct: 528 EGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFE 587
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLR 178
EA+ I M + V E L +T + LG +S L+ + P +L
Sbjct: 588 EAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMN----PGIYIMLS 643
Query: 179 DLDQEAKEKPQTYRSERLAVAYGLISTP 206
++ EA+ + L GL TP
Sbjct: 644 NIYAEARRWDKVDYIRGLMRNRGLKKTP 671
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 55/276 (19%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRP---NWSTFV 69
AL + +K+ N G+ ++ I +L+ C + ++E G+++ + G+ P ++ V
Sbjct: 330 ALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMV 389
Query: 70 GVITACG-------------------CFGA------VDEGFQHFESVTRDYD-INPTLE- 102
+ + G +GA V + + E TR ++P +
Sbjct: 390 DLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDG 449
Query: 103 HFLGIVDLY---GRLQKIAEAREFIRNMQIDA----SSVVWETL--------EKYAQTEP 147
+++ + ++Y GR + +A R+ +R+ + SS++ E + + + QTE
Sbjct: 450 YYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEE 509
Query: 148 GLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPP 207
E +L + K GY+P T VL D++++ KEK SE+LAV +GLI T P
Sbjct: 510 IFQTWE-----KLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTP 564
Query: 208 GRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
G +RI KNLR+C +CH +K +S + REI+VRD+
Sbjct: 565 GTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDR 600
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 56/81 (69%)
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
K +++GY P T VL ++D+E KE +Y SE+LA A+GLIST PG +RI KNLRIC +
Sbjct: 648 KLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDD 707
Query: 223 CHNFIKKLSSIENREIIVRDK 243
CH K LS I R IIVRD+
Sbjct: 708 CHAATKLLSKIYGRTIIVRDR 728
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 30/177 (16%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE E+ GV PN TFV + AC G +EH+ +VD
Sbjct: 479 LELFSEMESHGVEPNDITFVSIFHACSHSG--------------------LMEHYGCLVD 518
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
L GR + EA I NM + ++++W L + L LGE ++ L ++ GY
Sbjct: 519 LLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGY 578
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
VL+ + ++ S R A+++ + PG + + + G H+F
Sbjct: 579 -----SVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSW-----IEVSGSVHHF 625
>gi|302824741|ref|XP_002994011.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
gi|300138173|gb|EFJ04951.1| hypothetical protein SELMODRAFT_137997 [Selaginella moellendorffii]
Length = 434
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS K+ GY+P T VLR ++++ KE + SE+LA+A GLISTPPG TLR+ KNLR
Sbjct: 333 RLSVLMKEDGYVPDTTEVLRLVNEDEKESLLFFHSEKLAIACGLISTPPGTTLRVVKNLR 392
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH+ K +S I R+IIVRD
Sbjct: 393 VCSDCHSATKFISKITGRKIIVRD 416
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ L+A DG+ P+ TF +++AC G + GF HF+ + D+ I PT++HF +
Sbjct: 145 RALDAFLAMNVDGLFPDAVTFKSILSACSHAGLFEHGFFHFDLLVHDFGITPTMDHFKCM 204
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VDL GR ++ EA E ++ M V W TL + + G+ ++ + L +
Sbjct: 205 VDLLGRSGRLLEAEELVQTMPFVPDDVTWNTLLAACRVHKSVERGKRAAEVLLELTSEIP 264
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
GY +L ++ A + + + L A G+ P T+ I
Sbjct: 265 GYY----VLLSNIHAAAGDHAEKAKVRDLMEARGVRKKPGWSTIEI 306
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K+AGY+P T + L D+D+E KE SERLA+A+GLI+TP TLRI KNLR+
Sbjct: 1624 LMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRV 1683
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ K +S I R+I++RD
Sbjct: 1684 CGDCHSVYKFVSGIVGRKIVLRD 1706
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G +P+ TFV +++AC G VDEG +++S+TR++ + P +EH + I+DL GR +++
Sbjct: 1448 GPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSH 1507
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS-NKKKDAGYMPYT 173
A FI+ M + + + W +L + L L ++ L + D+ Y+ Y+
Sbjct: 1508 AEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYS 1562
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K+ E+ G +PN TF+ ++ AC G EG + F ++ Y+I P EH+ +VDL+ R
Sbjct: 424 KKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFAR 483
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSS 157
+ EA + + I ++ +W + + + LG+ ++S
Sbjct: 484 QGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAAS 527
>gi|190612769|gb|ACE80762.1| pentatricopeptide repeat protein [Pellia epiphylla]
Length = 152
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K+AGY+P T +VL D+D+E KE SE+LA+A+GL+STP G LRI KNLR+CG+CH
Sbjct: 64 KEAGYVPDTSFVLHDVDEEKKEFHLCGHSEKLAIAFGLMSTPSGTPLRILKNLRVCGDCH 123
Query: 225 NFIKKLSSIENREIIVRD 242
K ++ I R+IIVRD
Sbjct: 124 TATKFIAKIVGRKIIVRD 141
>gi|294464543|gb|ADE77782.1| unknown [Picea sitchensis]
Length = 210
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 61/83 (73%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS K K AGY+P +VL+D++ + KE ++ SE+LA+A+G+I+T PG T+R+ KNLR+
Sbjct: 110 LSRKMKAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRV 169
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH IK +S R+I+VRD
Sbjct: 170 CGDCHTVIKFISLNFTRKIVVRD 192
>gi|302824756|ref|XP_002994018.1| hypothetical protein SELMODRAFT_138073 [Selaginella moellendorffii]
gi|300138121|gb|EFJ04900.1| hypothetical protein SELMODRAFT_138073 [Selaginella moellendorffii]
Length = 335
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 101/191 (52%), Gaps = 20/191 (10%)
Query: 65 WSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPT-LEHFLGIVDLY---GRLQKIAEA 120
W + VG AC +G + G + + R ++NP + ++ + ++Y GR A
Sbjct: 134 WMSLVG---ACRNYGDWERGRR---AAQRVMELNPAYVGAYILMSNMYAAQGRWDDAAGV 187
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLL--LGEPSSSL------RLSNKKKDAGYMPY 172
RE + + A W ++E + P S RL+ K AGY+P
Sbjct: 188 RELMARRGL-AKEAGWSSIEVRNKVHVFTAKDCSHPKSEAIYAELHRLALLLKGAGYVPN 246
Query: 173 TEYVLRDLDQEAKEKPQTYRSERLAVAYGLIS-TPPGRTLRIKKNLRICGECHNFIKKLS 231
T VL+D+++E KE+ SE+LA+A+G++S T P TLRI KNLR+CG+CHN K LS
Sbjct: 247 TSLVLQDVEEELKEQLLFCHSEKLAIAFGVVSSTKPRSTLRIIKNLRMCGDCHNAFKLLS 306
Query: 232 SIENREIIVRD 242
SI REI+VRD
Sbjct: 307 SILEREIVVRD 317
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 58/85 (68%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
++S + K GY+P T VL DL++ KE+ SERLA+AYGLIST PG L+I KNLR
Sbjct: 529 KMSERIKSHGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLISTKPGSPLKIFKNLR 588
Query: 219 ICGECHNFIKKLSSIENREIIVRDK 243
+C +CH K +S I R+I++RD+
Sbjct: 589 VCSDCHTVTKLISKITGRKIVMRDR 613
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++P TF+G + AC G V+EG Q FES+ ++Y I P +EH+ +V L GR ++
Sbjct: 354 GLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKR 413
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
A E I+NM ++A SV+W ++ + +LG+ + + ++G
Sbjct: 414 AYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSG 462
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 76/258 (29%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYG---------- 112
P+ TF+GV+TAC G VD+G + F S+ Y+I P + H+ I+DL+G
Sbjct: 376 PDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALD 435
Query: 113 ---------------------RLQKIAEAREFI--RNMQID--------------ASSVV 135
R+ +E E + R +Q+D A
Sbjct: 436 AIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNR 495
Query: 136 WE--------TLEKYAQTEPGLLL------------GEPSSSLR---------LSNKKKD 166
WE +EK + EPG L G+ S + + N +
Sbjct: 496 WEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNN 555
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
GY P V ++ +E K+K + SE+LA+A+ L+S+ P +RI KNLR+C +CHN
Sbjct: 556 VGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIAFALLSSEPNTVIRIVKNLRMCLDCHNA 615
Query: 227 IKKLSSIENREIIVRDKT 244
IK +S + RE++VRD+T
Sbjct: 616 IKLISRLYGREVVVRDRT 633
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ K K+ GY+P T++VL D++ E KE+ SE++AVAY LISTP + +R+ KNLR+
Sbjct: 720 LALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRV 779
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH IK +S + REI+VRD
Sbjct: 780 CGDCHTAIKYISIVTGREIVVRD 802
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 6/171 (3%)
Query: 10 CREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFV 69
C +E AAL+V + + + + I K LE GV+PN T++
Sbjct: 496 CGNKE--AALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYI 553
Query: 70 GVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQI 129
V++AC G +DE ++HF S+ ++ I+P +EH+ +VDL GR + EA EFI +M
Sbjct: 554 AVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPF 613
Query: 130 DASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDL 180
DA ++VW T + LGE ++ L + D P T +L +L
Sbjct: 614 DADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHD----PATYILLSNL 660
>gi|190612979|gb|ACE80867.1| pentatricopeptide repeat protein [Lygodium japonicum]
Length = 152
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 62/86 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + K AGY P T+ VL D+D+ AKE+ Y SE+LA+A+GLISTP +LRI KNLR
Sbjct: 58 RLTFEMKKAGYAPDTKVVLHDVDEVAKEQMVCYHSEKLALAFGLISTPQRTSLRIIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+C +CH+ K +S + REI+VRD +
Sbjct: 118 MCPDCHSAFKFISKLTGREILVRDAS 143
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K+AGY+P T + L D+D+E KE SERLA+A+GLI+TP TLRI KNLR+
Sbjct: 983 LMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRV 1042
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ K +S I R+I++RD
Sbjct: 1043 CGDCHSVYKFVSGIVGRKIVLRD 1065
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G +P+ TFV +++AC G VDEG +++S+TR++ + P +EH + I+DL GR +++
Sbjct: 807 GPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSH 866
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS-NKKKDAGYMPYT 173
A FI+ M + + + W +L + L L ++ L + D+ Y+ Y+
Sbjct: 867 AEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYS 921
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS K ++AGY+P VL D+D+E KE SE+LAVA+G++++ PG T+ + KNLR+
Sbjct: 566 LSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRV 625
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH IK +S I +REIIVRD
Sbjct: 626 CGDCHTVIKLISKIVSREIIVRD 648
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 10/168 (5%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV+PN+ TF+ V+ AC G ++EG++ F +++ +Y++ P +EH+ +VDL GR I E
Sbjct: 390 GVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKE 449
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRD 179
A I++M++ V+W +L + + L E S+ + GY +L +
Sbjct: 450 AYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYV----LLAN 505
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
+ +A R L GL+ PPG +L + + G H F+
Sbjct: 506 IYADAGRWKDVERMRILVKDRGLVK-PPGYSL-----VELKGRVHVFL 547
>gi|376338373|gb|AFB33718.1| hypothetical protein 2_9455_01, partial [Pinus cembra]
Length = 156
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 62/83 (74%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+AGY+P T++VL D+++E K+ + SE+LA+A+GLI+TPP ++ + KNLR+
Sbjct: 56 LAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLINTPPWTSITVTKNLRV 115
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH K +S + REII+RD
Sbjct: 116 CGDCHRATKFISKVVGREIIMRD 138
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 79/264 (29%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L+ R DG P+ TFVGV++AC G V+EGF+HF+S++ Y ++P +EHF +
Sbjct: 776 KALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCM 835
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL---------------------------- 139
VDL GR K+ E +FI +M + + ++W T+
Sbjct: 836 VDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQ 895
Query: 140 ---------EKYAQTEPGLLLGEPSSSLRLSNKKKDAG------------------YMPY 172
YA E + + ++++ + KK+AG P
Sbjct: 896 NAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPE 955
Query: 173 TEYV---LRDLDQEAKEK---PQT-----------------YRSERLAVAYGLISTPPGR 209
+ + LR+L+++ ++ PQT Y SE++AVA+ +++
Sbjct: 956 KDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSAL 1014
Query: 210 TLRIKKNLRICGECHNFIKKLSSI 233
+RI KNLR+CG+CH+ +S I
Sbjct: 1015 PIRIMKNLRVCGDCHSAFGYISKI 1038
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 124/279 (44%), Gaps = 50/279 (17%)
Query: 11 REREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNW 65
R RE ALE +L+ G++ I +LN C L++ G+ E G+ P
Sbjct: 342 RSRE---ALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKV 398
Query: 66 STFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL---QKIAE--- 119
+ ++ G G V+E F +S+ D LG L+ L Q++A+
Sbjct: 399 EHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDA-AMWASLLGACRLHKNLALGQRVADYLV 457
Query: 120 ------AREFIRNMQIDASSVVWETLEKY--------AQTEPG------------LLLGE 153
+ ++ + A++ W + + Q EPG + G+
Sbjct: 458 GNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGD 517
Query: 154 PS--------SSLRLSNKKKDA-GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIS 204
S + L N A G++P+TE VL DLD AKE+ SE+LA+A+GLIS
Sbjct: 518 RSHPRSAEIYAKLEEVNSIARARGHVPHTELVLHDLDDAAKERALAVHSEKLALAFGLIS 577
Query: 205 TPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
TPP ++I KNLR C +CH +K +S R+I+ RD+
Sbjct: 578 TPPRTGIKIVKNLRACADCHAVLKLVSEATGRKIVFRDR 616
>gi|358357248|gb|AEU08464.1| pentatricopeptide repeat protein [Pogonatum urnigerum]
Length = 152
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + K GY+P T VL ++D+E KE SE+LA+AYGL+ TPPG T+R+ KNLR
Sbjct: 58 RLTEQIKAEGYIPDTWLVLHNIDEEDKELALCSHSEKLAIAYGLMRTPPGNTIRVYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S + REI+VRD
Sbjct: 118 VCSDCHTATKLMSKVTRREIVVRD 141
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTR-DYDINPTLEHFLGIVDLYGRLQKIAE 119
++PN + ++ C + + G + + D + + +L + + GRL A
Sbjct: 456 MQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAAS 515
Query: 120 AREFIR-NMQIDASSVVWETLEKYAQTEPGLLLGEPS--SSLRLSN-------KKKDAGY 169
R +R N + W + +G+ S SLR+ + K K AGY
Sbjct: 516 CRLRMRDNKSMKTPGCSWIEINNSVYE---FFMGDSSHPQSLRIYSMIRELKWKMKVAGY 572
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKK 229
P T+ V+ ++D+E KE + SE+LA+A+GLI+T G T+RI KNLR+C +CH+ IK
Sbjct: 573 KPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKI 632
Query: 230 LSSIENREIIVRDKT 244
+S I REI+VRD++
Sbjct: 633 ISKIVEREIVVRDRS 647
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
DG+ PN +F+G++TAC G VD+G ++F+ + + Y I P +EH+ +VDL R ++
Sbjct: 386 DGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLD 445
Query: 119 EAREFIRNMQIDASSVVWETL 139
+A I +M + + +VW L
Sbjct: 446 QAESLINSMPMQPNVIVWGAL 466
>gi|190612679|gb|ACE80717.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + ++AGY+P T +VL D+D+E K SE+LA+ +GL+STPPG LRI KNLR
Sbjct: 58 RLHVRMEEAGYVPDTRFVLHDVDEEFKVFRLNNHSEKLAIGFGLLSTPPGTPLRIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S IE RE+IVRD
Sbjct: 118 VCVDCHTATKFISKIEGRELIVRD 141
>gi|125559306|gb|EAZ04842.1| hypothetical protein OsI_27020 [Oryza sativa Indica Group]
Length = 413
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 35/239 (14%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
EV A E+ D ++ F S I + LE + + P+ T V V++
Sbjct: 184 EVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVS 243
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDA-- 131
AC GA+ G + + +AE R+ IR I
Sbjct: 244 ACSDLGALAVGAE------------------------ANSWEGVAEMRKTIRRDNIQRIP 279
Query: 132 --SSVVWETLEKYAQTEPGLLLGEPSSSL-----RLSNKKKDAGYMPYTEYVLRDLDQEA 184
SS+ W+ EK + G L S + + ++ K AGY P T VL+D+D+++
Sbjct: 280 GRSSIEWD--EKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQAGYKPMTGLVLQDIDEQS 337
Query: 185 KEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
KE+ SE+LA+A+ L++TP T+RI KNLR C +CH+ +K +S + +R++IVRD+
Sbjct: 338 KERSLAEHSEKLAIAFALLTTPARSTIRITKNLRACEDCHSAMKLISLVYDRKLIVRDR 396
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K+AGY+P T + L D+D+E KE SERLA+A+GLI+TP TLRI KNLR+
Sbjct: 974 LMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRV 1033
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ K +S I R+I++RD
Sbjct: 1034 CGDCHSVYKFVSGIVGRKIVLRD 1056
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G +P+ TFV +++AC G VDEG +++S+TR++ + P +EH + I+DL GR +++
Sbjct: 798 GPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSH 857
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS-NKKKDAGYMPYT 173
A FI+ M + + + W +L + L L ++ L + D+ Y+ Y+
Sbjct: 858 AEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYS 912
>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 111/259 (42%), Gaps = 64/259 (24%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEG---------------FQHFES-- 90
K + K+ E G++PN+ TF+ V+ AC G V++G QH+ S
Sbjct: 195 KAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMKEYGIEPGAQHYASMV 254
Query: 91 --------------VTRDYDINPT------------------LEHFLG--------IVDL 110
+ + + PT L F+ +
Sbjct: 255 DLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELASFVADRVFELGPVSSA 314
Query: 111 YGRLQKIAEAREFIRNMQIDA-SSVVWETLEKYAQTEPGLLLGEPSSS------LRLSNK 163
GR ++ A AR+ +R+ + + + W T P + L +
Sbjct: 315 AGRYEEAARARKMLRDQGVKKETGLSWVEEGNRIHTFAAGDRSHPYTKDIYKKLEELGEE 374
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
+ AGY+ T +VL+++D E K + Y SERLA+A+GLIS PP R +R+ KNLR+CG+C
Sbjct: 375 MERAGYIADTSFVLQEVDGEEKNQTIRYHSERLAIAFGLISFPPERPIRVMKNLRVCGDC 434
Query: 224 HNFIKKLSSIENREIIVRD 242
H IK +S R IIVRD
Sbjct: 435 HTAIKFMSKCCGRTIIVRD 453
>gi|361066651|gb|AEW07637.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158059|gb|AFG61375.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158063|gb|AFG61377.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158065|gb|AFG61378.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158067|gb|AFG61379.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158069|gb|AFG61380.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158071|gb|AFG61381.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158073|gb|AFG61382.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158075|gb|AFG61383.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158077|gb|AFG61384.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158079|gb|AFG61385.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158081|gb|AFG61386.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158083|gb|AFG61387.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158085|gb|AFG61388.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158087|gb|AFG61389.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
gi|383158089|gb|AFG61390.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
Length = 110
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + K GY+P T VL D+D E KE +Y SE+LA+A+GLIST P + +R+ KNLR
Sbjct: 9 RLAVQMKAEGYVPNTGLVLHDVDDEQKECILSYHSEKLAIAFGLISTAPDKVIRVVKNLR 68
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S I REIIVRD
Sbjct: 69 VCIDCHTATKFISKIVGREIIVRD 92
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
+ GYMP T +VL D+++E K+ Y SE+LAV +G++STP G ++I KNLRICG+CH
Sbjct: 963 RATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCH 1022
Query: 225 NFIKKLSSIENREIIVRD 242
F+K +S + R+II+RD
Sbjct: 1023 TFMKFMSKVTLRKIIIRD 1040
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 51 EAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA K FE +G+ P+ +F+GV+ AC G VDEG+ HF S+T+ Y I P + H+ +
Sbjct: 770 EAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCM 829
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE-PSSSLRLSNKKKD 166
VDL GR ++EA I NM + SV+WE L + + LG+ + L K K
Sbjct: 830 VDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKS 889
Query: 167 AGYM 170
A Y+
Sbjct: 890 ATYV 893
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 63/89 (70%)
Query: 156 SSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKK 215
++ ++ + K AG++P + VL D+D E KE+ + SE+LA+A+GL+STP TLRI K
Sbjct: 698 TAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTLRIMK 757
Query: 216 NLRICGECHNFIKKLSSIENREIIVRDKT 244
NLR+C +CH IK +S + +REII+RD T
Sbjct: 758 NLRVCNDCHTAIKFISKVADREIILRDAT 786
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 61/109 (55%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV+P+ TFVGV++AC G VDEG ++F+ + + I P + H+ +VDL R +E
Sbjct: 526 GVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSE 585
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
A+EFI+ M ++ ++ W +L + L E ++ LS ++G
Sbjct: 586 AQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSG 634
>gi|297736728|emb|CBI25813.3| unnamed protein product [Vitis vinifera]
Length = 286
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 62/84 (73%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L++K K+ GY+P T++VL D+++E KE+ SE++AVA+GLIST + +RI KNLR
Sbjct: 185 QLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLR 244
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH IK +S REI+VRD
Sbjct: 245 VCGDCHTAIKYISMATGREIVVRD 268
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 112/265 (42%), Gaps = 76/265 (28%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR- 113
RF D V+P+ T + V+ G VDEG F+ + ++ +H+ ++DL GR
Sbjct: 329 RFMCDKVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRS 388
Query: 114 ---------LQKI---------------------AEAREFIRNMQID------------- 130
+QK+ EF+ D
Sbjct: 389 GQLEKALLLIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILS 448
Query: 131 ---ASSVVWE--------TLEKYAQTEPGL-------LLGEPSSSLRLSNKKKD------ 166
A++ +W+ L+K EPG ++ SS R +K+D
Sbjct: 449 NIYAAARMWKDVFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKIN 508
Query: 167 --------AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
AG++P VL D+D E KE+ SE+LA+ +GL+STP T+++ KNLR
Sbjct: 509 EIYAAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLR 568
Query: 219 ICGECHNFIKKLSSIENREIIVRDK 243
IC +CHNF K +S + REI +RDK
Sbjct: 569 ICVDCHNFAKFVSKVYGREISLRDK 593
>gi|190612873|gb|ACE80814.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K+AGY+P T VL D+++E K + SE+LA+A+GL+ST PG LRI KNLR
Sbjct: 58 RLSEQMKEAGYVPDTRLVLHDVEEEEKILRLCHHSEKLAIAFGLLSTVPGTPLRIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ +E REI+VRD
Sbjct: 118 VCTDCHTATKIIAKVEGREIVVRD 141
>gi|293334801|ref|NP_001169361.1| uncharacterized protein LOC100383228 [Zea mays]
gi|224028917|gb|ACN33534.1| unknown [Zea mays]
Length = 596
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 54/77 (70%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY P T VL D+ +E K+ +Y SE+LA+A+GLISTPPG T+R+ KNLR CG+CH
Sbjct: 504 GYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLISTPPGETIRVIKNLRTCGDCHVVA 563
Query: 228 KKLSSIENREIIVRDKT 244
K +S NR II+RD+
Sbjct: 564 KLISKAYNRVIIIRDRA 580
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+ P+ T++ V+ C G VD+G + F+S+ + P ++H+ IVDL GR ++AEA
Sbjct: 325 IEPDEITYLAVMGGCNHAGLVDDGRRVFDSMR----VPPNMKHYGTIVDLLGRAGRLAEA 380
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVL 177
+ I +M A V+W+TL A+ + L E +++ K D G +YVL
Sbjct: 381 YDMIMSMPFPADIVLWQTLLGAAKMHGNVDLAELAAT-----KLADLGSNVDGDYVL 432
>gi|383158061|gb|AFG61376.1| Pinus taeda anonymous locus 0_7614_01 genomic sequence
Length = 110
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + K GY+P T VL D+D E KE +Y SE+LA+A+GLIST P + +R+ KNLR
Sbjct: 9 RLAVQMKAEGYVPNTGLVLHDVDDEQKECILSYHSEKLAIAFGLISTTPDKVIRVVKNLR 68
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S I REIIVRD
Sbjct: 69 VCIDCHTATKFISKIVGREIIVRD 92
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 56/78 (71%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
++AGY+P T+ VL D+D+E KE Y SE+LA+A+GLISTP +L I KNLR+C +CH
Sbjct: 841 REAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCH 900
Query: 225 NFIKKLSSIENREIIVRD 242
K +S I REI+VRD
Sbjct: 901 TATKFISKITGREIVVRD 918
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
LKL+ ++ E +GV+ N TFV V+++C G + EG Q+F S+ D I EH+
Sbjct: 650 LKLI---RKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGC 706
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTE---------PGLLL----GE 153
+VDL GR K+ EA ++I M ++ V W +L + + G LL G
Sbjct: 707 LVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGN 766
Query: 154 PSSSLRLSNKKKDAG 168
S+S+ LSN + G
Sbjct: 767 SSASVVLSNIYSERG 781
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 63/84 (75%), Gaps = 3/84 (3%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L+++ + GY+P TE+V DLD++ + +Y SERLA+A+GL++T PG L I KNLR
Sbjct: 579 KLNSEMRKLGYVPRTEFVYHDLDED---QLLSYHSERLAIAFGLLNTSPGTRLVIIKNLR 635
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH+ IK +S I +REI+VRD
Sbjct: 636 VCGDCHDAIKYISKIVDREIVVRD 659
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 11/181 (6%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++P+ +TF +++A G V+EG F+ + +++ I P +H++ IVDL R + E
Sbjct: 404 GIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEE 463
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRD 179
A + + +MQ + + +W L L LGE + L + +D G + ++ +
Sbjct: 464 ANDMLASMQTEPTIAIWVILLSGCLNNKKLELGETIAKKILELRPEDIGVLA----LVSN 519
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI-KKLSSIENREI 238
L AK+ + +L G P + +K G H F+ + S ++REI
Sbjct: 520 LYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVK------GTRHAFVMEDQSHPQHREI 573
Query: 239 I 239
+
Sbjct: 574 L 574
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 26/211 (12%)
Query: 51 EAGKRFENDGVRPN---WSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTL-EHFL 105
A K + + PN W T +G AC G G E ++R ++P+ E+++
Sbjct: 323 HAHKFIQTMPIEPNVVLWRTLLG---ACKTHGYKGLG----EHISRKILKLDPSSPENYV 375
Query: 106 GIVDLY---GRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLR--- 159
+ ++Y GR + + R ++ + W ++E ++GE S R
Sbjct: 376 FVSNVYASLGRWSSVCQVRSLMKE-KAPKKQHGWSSIEINFMVHK-FIMGEESHPKREKI 433
Query: 160 ------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
++ K K G++ T VL D+D+E KE SERLA+AYGL+ TP G +RI
Sbjct: 434 YGMLHQMARKLKQVGHVASTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRI 493
Query: 214 KKNLRICGECHNFIKKLSSIENREIIVRDKT 244
KNLR C +CH IK +S + NREII+RD+
Sbjct: 494 VKNLRACRDCHEVIKLISEVYNREIILRDRV 524
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
L+L +A KR + + PN TF V++A G V++G Q FE++ +Y I P ++H+
Sbjct: 254 LQLFDAMKRSK---IIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGC 310
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
+VDL+ R + A +FI+ M I+ + V+W TL +T LGE
Sbjct: 311 MVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKGLGE 357
>gi|242095216|ref|XP_002438098.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
gi|241916321|gb|EER89465.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
Length = 596
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 58/85 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+ +K + GY P T VL D+ +E K+ +Y SE+LA+A+GLISTPPG T+R+ KNLRI
Sbjct: 496 IGSKICELGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLISTPPGETIRVIKNLRI 555
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CH K +S R II+RD+
Sbjct: 556 CGDCHVVAKLISKAYGRVIIIRDRA 580
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+ P+ T++ V+ C G VD+G + F+S+ + P ++H+ IVDL GR ++AEA
Sbjct: 325 IEPDEVTYLAVLGGCNHAGLVDDGRRVFDSMR----VPPNMKHYGTIVDLLGRAGRLAEA 380
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVL 177
+ I +M A V+W+TL A+ + L E +++ K D G +YVL
Sbjct: 381 HDMIMHMPFPADIVLWQTLLGAAKMHGNVDLAELAAT-----KLADLGSNVDGDYVL 432
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 60/85 (70%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ + + GY+P+T VL D++ E KE Y SERLA+A+ L+ + PG +RI KNLR+
Sbjct: 498 IAERLRRQGYIPHTSNVLADIEDEEKESALNYHSERLAIAFALLKSLPGTPIRIVKNLRV 557
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CH IK +S + +REIIVRD++
Sbjct: 558 CGDCHMAIKLISKVYDREIIVRDRS 582
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
E + + P T VGV+ AC G VD+GF++F+ + +Y I P +EH +VDL GR
Sbjct: 318 MEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAG 377
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPS 155
++ EA +I M ++ ++VVW TL L +GE +
Sbjct: 378 RVEEAHNYITTMPLEPNAVVWRTLLGACAMHKKLEIGEAA 417
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K K+ GY+P ++ L D++ E KE+ ++ SERLA+A+GL+ST G T+ + KNLR+
Sbjct: 575 LGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRV 634
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ IK +S I R+I+VRD
Sbjct: 635 CGDCHSVIKLMSKIVGRKIVVRD 657
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV PN TF G+++AC G + +G FE ++R +H+ +VD+ GR K+ E
Sbjct: 399 GVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDE 458
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
A E +R M + A+S++W L + L + E ++
Sbjct: 459 AEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAA 495
>gi|359497341|ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 358
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 101/199 (50%), Gaps = 23/199 (11%)
Query: 67 TFVGVITAC----GCFG-----AVDEGFQHFESVTRDYDINPT-LEHFLGIVDLY---GR 113
T VITAC G G AV GF + SV + P+ ++ + ++Y GR
Sbjct: 142 TLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNVLQLEPSNAAPYVVLSNMYASAGR 201
Query: 114 LQKIAEAREFIRNMQIDAS-SVVWETLEK-----YAQTEPGLLLGEPSSSLR-LSNKKKD 166
+++A R+F+R+ + W ++K A+ ++ E L +S K K
Sbjct: 202 WEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKR 261
Query: 167 AGYMPYTEYVLRDLDQE---AKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
AGY+P + L D KE + SE+LAVA+GLIST G + + KNLRICG+C
Sbjct: 262 AGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPILVVKNLRICGDC 321
Query: 224 HNFIKKLSSIENREIIVRD 242
HN IK +S+I REI VRD
Sbjct: 322 HNAIKFISAIAGREITVRD 340
>gi|358357202|gb|AEU08441.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K+AGY+P T +VL D+ +E KE + SE+LA+ +GLIST P LR+ KNLR
Sbjct: 58 RLSGQMKEAGYVPDTRFVLHDVGEEQKEFSLCHHSEKLAIGFGLISTAPRTPLRLIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I R I+VRD
Sbjct: 118 VCGDCHTSTKFISKIVGRAIVVRD 141
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 128/287 (44%), Gaps = 47/287 (16%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND--- 59
N+ + + + ALE+ + + G++ I LLN C ++E G+ F
Sbjct: 590 NAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMER 649
Query: 60 --GVRPNWSTFVGVITACGCFGAVDEGFQHFES--VTRDYDINPTL--------EHFLG- 106
G+ P + ++ G G + E F +S +T D + +L LG
Sbjct: 650 EYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQ 709
Query: 107 -IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKY--------AQTEPG--------- 148
I D Y + +A + +I I A+ W + + Q EPG
Sbjct: 710 QIAD-YLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCSSIEIDRE 768
Query: 149 ---LLLGEPSSSL---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERL 196
+ G+ S +++ K+ G++P TE VL DLD+ KEK SE+L
Sbjct: 769 VYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQTELVLHDLDEATKEKALAVHSEKL 828
Query: 197 AVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
A+A+GLIST PG T++I KNLR C +CH +K +S I R+I+ RD+
Sbjct: 829 ALAFGLISTQPGATIKIVKNLRACSDCHAVLKLISRITGRKIVFRDR 875
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K+AGY+P + L D+D+E KE Y SE+LAVA+GL++ PP +RI KNLR+CG+CH
Sbjct: 742 KEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCH 801
Query: 225 NFIKKLSSIENREIIVRD 242
+ +K +S + R II+RD
Sbjct: 802 SAMKYISRVFTRHIILRD 819
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 83/156 (53%), Gaps = 4/156 (2%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+ G RP++ TF+G++ AC G VDEG ++F+ + + Y I P EH+ ++DL+GR K+
Sbjct: 559 SSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKL 618
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVL 177
EA++ + M + + VW++L + L L E +++ + +A MPY +L
Sbjct: 619 DEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNA--MPYV--ML 674
Query: 178 RDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRI 213
++ +++ + +L + G++ P L I
Sbjct: 675 SNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEI 710
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 57/80 (71%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K AG++P VL D+D E KE+ + SE+LA+A+GLISTP TLRI KNLR+C +CH
Sbjct: 708 KKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCH 767
Query: 225 NFIKKLSSIENREIIVRDKT 244
IK +S + +REIIVRD T
Sbjct: 768 TAIKFISKVVDREIIVRDAT 787
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV+P+ T++GV +AC G +D+G +++E + ++ I P + H+ +VDL R + E
Sbjct: 527 GVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTE 586
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
A EFI+ M + +VVW +L + L E ++ LS ++G
Sbjct: 587 AHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSG 635
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 127/273 (46%), Gaps = 51/273 (18%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
ALE+ ++LKN+G+ + I +L C + L+E G + N + F +I
Sbjct: 389 ALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMI 448
Query: 73 TACGCFGAVDEGFQHFESVTRDYDI-----------------------NPTLE------- 102
G ++E E V R+ D+ + LE
Sbjct: 449 DLLGRSRRLEEAAMLIEEV-RNPDVVLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGG 507
Query: 103 -HFLGIVDLY---GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSS 157
H L + +LY G+ ++ E + IR++++ S ++ W +++ T L P S
Sbjct: 508 THIL-LTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSL 566
Query: 158 ------LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT- 210
L K K GY P T +VL+DLD+E K Y SE+LA+AY L T GRT
Sbjct: 567 EIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAIAYALWKTI-GRTT 625
Query: 211 -LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KNLR+CG+CH++IK +S + R+II RD
Sbjct: 626 TIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARD 658
>gi|302793743|ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
gi|300153445|gb|EFJ20083.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
Length = 438
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS+ K+AGY+P T VL D+ +E KE+ + SE+LAVA+GL++TP G +R+ KNLR+
Sbjct: 338 LSSAMKEAGYVPDTSLVLHDVAEEEKEQVLLWHSEKLAVAFGLLNTPAGSPIRVIKNLRV 397
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH+ K +S+IE R I+ RD
Sbjct: 398 CKDCHDAAKLISAIEQRRIVFRD 420
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 5/163 (3%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ L +R + G +PN+ TFV +++AC G V+EG ++F+ +T Y I P +H+ +
Sbjct: 150 RALATFQRMQEQGHKPNYVTFVHLLSACSHKGLVEEGRKYFDLMTARYGIAPDAQHYACM 209
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VDL GR + EA +F+ M + V ++L ++ + GE + L + ++
Sbjct: 210 VDLLGRAGYLDEAEDFLNRMPGAPHAAVLKSLLSACRSYKDVDRGERIAKRMLESFWDES 269
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
MPY VL + + A + + R L V G + PGR+
Sbjct: 270 --MPYV--VLASIYRAAGKWEEAARIRSLMVERG-VRKDPGRS 307
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 22/199 (11%)
Query: 61 VRPN---WSTFVGVITACGCFGAVDEG-----FQHFESVTRDYDINPTLEHFLGIVDLYG 112
++PN W +G GC D G QH + D D + + + + G
Sbjct: 361 MKPNVIIWGALLG-----GCRIYRDSGRGQRVVQHI--LELDSDHSGSYVYLANVYSSMG 413
Query: 113 RLQKIAEAREFIR-NMQIDASSVVWETLEKYAQTEPGLLLGEPSSS------LRLSNKKK 165
RL A+ R +R N + W ++ L P S+ L K K
Sbjct: 414 RLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSMIRELMWKMK 473
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
AGY P T+ V+ +D+E KE + SE+LA+A+GLIST G T+R+ KNLRIC +CH+
Sbjct: 474 LAGYKPKTDLVVHSIDEEEKEDALSIHSEKLAIAFGLISTSEGTTIRVVKNLRICNDCHD 533
Query: 226 FIKKLSSIENREIIVRDKT 244
K +S I REIIVRD++
Sbjct: 534 AAKIISGIVKREIIVRDRS 552
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G +PN F+G++TAC G V +G F ++ ++Y ++P +EH+ +VDL R ++ +
Sbjct: 292 GEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDK 351
Query: 120 AREFIRNMQIDASSVVWETL 139
A + I +M + + ++W L
Sbjct: 352 AEDMISSMPMKPNVIIWGAL 371
>gi|413952609|gb|AFW85258.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
gi|413952610|gb|AFW85259.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
gi|413952611|gb|AFW85260.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
Length = 630
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 54/77 (70%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY P T VL D+ +E K+ +Y SE+LA+A+GLISTPPG T+R+ KNLR CG+CH
Sbjct: 538 GYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLISTPPGETIRVIKNLRTCGDCHVVA 597
Query: 228 KKLSSIENREIIVRDKT 244
K +S NR II+RD+
Sbjct: 598 KLISKAYNRVIIIRDRA 614
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+ P+ T++ V+ C G VD+G + F+S+ + P ++H+ IVDL GR ++AEA
Sbjct: 359 IEPDEITYLAVMGGCNHAGLVDDGRRVFDSMR----VPPNMKHYGTIVDLLGRAGRLAEA 414
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVL 177
+ I +M A V+W+TL A+ + L E +++ K D G +YVL
Sbjct: 415 YDMIMSMPFPADIVLWQTLLGAAKMHGNVDLAELAAT-----KLADLGSNVDGDYVL 466
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 130/271 (47%), Gaps = 45/271 (16%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
AL + ++ + G+ + I +L C + L+ GK++ + GV P + ++
Sbjct: 298 ALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMV 357
Query: 73 TACGCFGAVDEGFQHFESVTRDYD------------INPTLE------------------ 102
G G V+E + S+T D I+ +E
Sbjct: 358 DLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADG 417
Query: 103 HFLGIVDLYGR---LQKIAEAREFIRNMQIDA----SSVVWE-TLEKYAQTEPGLLLGEP 154
H++ + ++Y + + +AE R+ IR I SS+ WE T+ ++ + E
Sbjct: 418 HYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSSIEWENTVHEFVSGDRSHPRIEE 477
Query: 155 SSSL--RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
+ + ++ + AGY P T VL+D+D+++K++ SE+LA+A+GL+ TP TLR
Sbjct: 478 IYKMLEEMMDRLRQAGYRPMTSLVLQDIDEQSKKRALAEHSEKLAIAFGLLVTPARSTLR 537
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRDK 243
I KNLR C +CH+ IK +S +R++IVRD+
Sbjct: 538 ITKNLRACEDCHSAIKLISLAYDRKLIVRDR 568
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
+++ +L+V + + S II L N + L + G++PN TF+GV+
Sbjct: 263 DIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLI 322
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
AC G V++G ++F S++ + + P +EH+ +VDL GR + EA E IR+M
Sbjct: 323 ACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDP 382
Query: 134 VVWETLEKYAQTEPGLLLGEPS-SSLRLSNKKKDAGYMPYTE-YVLRDLDQEAKEKPQTY 191
++W TL + + + E + + L++ + D Y+ + Y + + E +T
Sbjct: 383 IIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTI 442
Query: 192 RSERLAVAYGLISTPPGRT 210
R E I PGR+
Sbjct: 443 RREN-------IQRVPGRS 454
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 121/271 (44%), Gaps = 47/271 (17%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
AL + +K G+ D ++ +L+ C L++ G+++ ++ GVRPN + ++
Sbjct: 489 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMV 548
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQ---- 128
G G ++E +++ + D LG ++G + A + I M+
Sbjct: 549 DLLGRAGLLEEAHNLMKNMPFEPDA-AIWGTLLGASRVHGNTELAETAADKIFAMEPENS 607
Query: 129 --------IDASSVVWETL--------EKYAQTEPGLLLGEPSSSLR------------- 159
+ ASS W + +K + PG E +
Sbjct: 608 GMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKD 667
Query: 160 --------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
L + K AGY+ T VL D+++E KE+ Y SERLAVAYG++ GR +
Sbjct: 668 EIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPI 727
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRD 242
R+ KNLR+C +CHN IK ++ + R II+RD
Sbjct: 728 RVIKNLRVCEDCHNAIKYMAKVTGRLIILRD 758
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L K ++ GY+ T +VL D++ E K++ Y SERLAVA+G+I+TP G +++ KNLR
Sbjct: 534 KLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKVFKNLR 593
Query: 219 ICGECHNFIKKLSSIENREIIVRDK 243
ICG+CH IK +S I REIIVRD
Sbjct: 594 ICGDCHTTIKLISKIVQREIIVRDS 618
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 44 CMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH 103
C D+ L + G RP+ TFVGV++AC G VD+G F S+ Y I T +H
Sbjct: 351 CFDMLL--------SSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADH 402
Query: 104 FLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+ ++DL R A + I M + + +W +L
Sbjct: 403 YACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASL 438
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE + + +GV+P+W TFVG ++AC G ++EG HF+S+ ++++I P +EH+ +VD
Sbjct: 701 LELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVD 759
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
L+GR + EA EFI MQ++ S VW L Q + L E ++ +L D G
Sbjct: 760 LFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGV 819
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
+L ++ A + + ++ + G++ PG++ + + G+ H F
Sbjct: 820 F----VILSNIYAAAGMWKEVAKMRKVMLDRGVVK-KPGQSW-----IEVDGKVHTF 866
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 54/84 (64%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + + GY+P T YVL D++ KE+ Y SERLA+ YGL+ TPP + I KNLR
Sbjct: 885 RLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLR 944
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I R+II RD
Sbjct: 945 VCGDCHTATKFISKITKRQIIARD 968
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE + + +GV+P+W TFVG ++AC G ++EG HF+S+ ++++I P +EH+ +VD
Sbjct: 701 LELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVD 759
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
L+GR + EA EFI MQ++ S VW L Q + L E ++ +L D G
Sbjct: 760 LFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGV 819
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
+L ++ A + + ++ + G++ P + + G+ H F
Sbjct: 820 F----VILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVD------GKVHTF 866
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 54/84 (64%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + + GY+P T YVL D++ KE+ Y SERLA+ YGL+ TPP + I KNLR
Sbjct: 885 RLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLR 944
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I R+II RD
Sbjct: 945 VCGDCHTATKFISKITKRQIIARD 968
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 11/182 (6%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L+ + +G++PN+ TFVGV++AC G +D GF HF+S+++ + I P +EH++ +
Sbjct: 629 KALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQ-FGIEPGIEHYVCM 687
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
V L GR K+ EA+EFI M I ++VVW +L + + LG ++ + +S D+
Sbjct: 688 VSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADS 747
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
G YVL +K R R + + PG + + + E H FI
Sbjct: 748 G-----SYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSW-----IEVNNEIHKFI 797
Query: 228 KK 229
K
Sbjct: 798 AK 799
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 56/78 (71%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
++AGY+P T+ VL D+D+E KE Y SE+LA+A+GLISTP +L I KNLR+C +CH
Sbjct: 592 REAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCH 651
Query: 225 NFIKKLSSIENREIIVRD 242
K +S I REI+VRD
Sbjct: 652 TATKFISKITGREIVVRD 669
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
LKL+ ++ E +GV+ N TFV V+++C G + EG Q+F S+ D I EH+
Sbjct: 401 LKLI---RKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGC 457
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+VDL GR K+ EA ++I M + V W +L
Sbjct: 458 LVDLLGRAGKLQEAEKYISKMPSEPEIVTWASL 490
>gi|294461983|gb|ADE76547.1| unknown [Picea sitchensis]
Length = 210
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L+ + K AG++P T + L D+D E KE+ + SE+LA+A+ LISTP G +++I KNLR
Sbjct: 109 KLAGQMKTAGHVPNTNFALHDVDDEQKERTLYHHSEKLAIAFALISTPHGTSIQINKNLR 168
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S I REI+VRD
Sbjct: 169 VCVDCHTATKFISKIAGREIVVRD 192
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 110/259 (42%), Gaps = 76/259 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDE----------------GFQHF--------------- 88
G RPN+ TF+GVI AC VDE G +H+
Sbjct: 421 GERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDE 480
Query: 89 -ESVTRDYDIN------PTLEHFLGIVDLYGRLQKIAE---------AREFIRNMQIDAS 132
E+ R + IN TL + + Y + +KIAE +I + A
Sbjct: 481 AENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHAR 540
Query: 133 SVVWETL--------EKYAQTEPGLL---------------LGEPSSSLRLSNKK----- 164
W+ + E+ + EPG+ + P ++L N K
Sbjct: 541 VRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSK 600
Query: 165 -KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
+ GY+P + VL D++ E K +Y SE+LAVAYGL+ TP G + + KNLR+C +C
Sbjct: 601 IRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMCDDC 660
Query: 224 HNFIKKLSSIENREIIVRD 242
H IK +S + NR I+VRD
Sbjct: 661 HTAIKLISKVANRVIVVRD 679
>gi|302800080|ref|XP_002981798.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
gi|300150630|gb|EFJ17280.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
Length = 483
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL ++AGY+P TE VL D+++E KE+ Y SE+ A+A+GLISTP G LR+ KNLR
Sbjct: 382 RLGVLMREAGYVPDTEVVLMDVEEEEKEQVLCYHSEKQAMAFGLISTPSGTPLRVVKNLR 441
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S I R+I VRD
Sbjct: 442 VCTDCHTATKFISKITGRQITVRD 465
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 68 FVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNM 127
FV V++ C G + + F S+ +DY ++P E++ I+DL GRL ++ + + + NM
Sbjct: 215 FVKVMSGCNHAGLLKDARNWFVSMLQDYGLSPVNENYACILDLLGRLGQLQDVEDLLENM 274
Query: 128 QIDASSVVWETLEKYAQTEPGLLLG-EPSSSLRLSNKKKDAGYM 170
++ + W + + + G + L N++ A Y+
Sbjct: 275 TLEPDFIAWMSFLNACKVHKDMKRGVRAAQRLVQLNRRNSASYV 318
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGC 77
A+EV D + N + + + I L+ LE KR + +GVR + F V+ C
Sbjct: 64 AIEVFDAMHNKSVVVWTAMIAAHSQQGQGLEALELFKRMDIEGVRADKVAFSLVLDVCAN 123
Query: 78 FGAVDEG-FQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVW 136
A+ + H + + + +++ L V++YG+ K+ EAR+ M V W
Sbjct: 124 LAALAQARILHATVAGTELEQDMVVKNTL--VNMYGKCGKLNEARQVFEKMA-SKDMVSW 180
Query: 137 ET-LEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
+ + YAQ G S++ L + + AG
Sbjct: 181 TSIIAAYAQQ------GSASAAFELFHAMQQAG 207
>gi|302804779|ref|XP_002984141.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
gi|300147990|gb|EFJ14651.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
Length = 487
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 110/223 (49%), Gaps = 27/223 (12%)
Query: 37 IIELLNVCMDLKLLEAG-KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDY 95
+I+LL DL+ E +R NW+ F + AC + G + E V
Sbjct: 259 MIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIF---LAACKVHSDTERGKRAAEKV---L 312
Query: 96 DINPTLEHFLGIVDLY---GRLQKIAEAREFIRNM---------QIDASSVV---WETLE 140
++ P ++ + ++Y G ++ R ++ M I+ +S V W +
Sbjct: 313 ELEPVPAAYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIEVNSRVHEFWAGDK 372
Query: 141 KYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAY 200
+ + L E L+ + + +GY+P T+ VL ++ +E KE+ + SE+LA+A+
Sbjct: 373 SHPRAAEIYGLLES-----LTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFHSEKLAIAF 427
Query: 201 GLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
GL+STP G +LRI KNLR+CG+CH K +S I REI +RD
Sbjct: 428 GLLSTPAGSSLRIIKNLRVCGDCHTAAKFVSRIAGREIFMRDS 470
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
R + DG +P+ + + V++ C G V++G+ F +T+++ + P +H+ ++DL GR
Sbjct: 207 RMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFFLDITKEFGVEPGEKHYGCMIDLLGRS 266
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTE 174
+ A IR M A+++ W + G+ ++ L + A Y+
Sbjct: 267 GDLEAAEVMIRRMPFQATAMNWAIFLAACKVHSDTERGKRAAEKVLELEPVPAAYVS--- 323
Query: 175 YVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L ++ A E Q R A GL PGR+ I+ N R+
Sbjct: 324 --LSNIYAAAGEWDQVDRVRSAMKAMGL-QKDPGRS-SIEVNSRV 364
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+ K +AGY+P T VL ++D+E KE TY SE+LA+A+GLIST P +RI KNLR+
Sbjct: 671 MRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRV 730
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
C +CH K LS I R IIVRD+
Sbjct: 731 CNDCHAATKLLSKIYGRVIIVRDR 754
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
E GV+PN TF+G++ AC G V EG + FE + + + P +EH+ +VDL GR
Sbjct: 491 MERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAG 550
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
+ EA E I++M I +++VW L + LGE +++ L + ++ GY
Sbjct: 551 LLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGY 604
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 44 CMDLKLLEAGK----RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP 99
C+ LE G R + + + PN T + +I CG GA+ G Q + R+ +
Sbjct: 273 CIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRN-GFSV 331
Query: 100 TLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWET-LEKYAQT 145
+L +VD+YG+ I AR + Q + ++W L YAQ
Sbjct: 332 SLALATALVDMYGKCSDIRNARALFDSTQ-NRDVMIWTAMLSAYAQA 377
>gi|302780908|ref|XP_002972228.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
gi|300159695|gb|EFJ26314.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
Length = 487
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 110/223 (49%), Gaps = 27/223 (12%)
Query: 37 IIELLNVCMDLKLLEAG-KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDY 95
+I+LL DL+ E +R NW+ F + AC + G + E V
Sbjct: 259 MIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIF---LAACKVHSDTERGKRAAEKV---L 312
Query: 96 DINPTLEHFLGIVDLY---GRLQKIAEAREFIRNM---------QIDASSVV---WETLE 140
++ P ++ + ++Y G ++ R ++ M I+ +S V W +
Sbjct: 313 ELEPVPAAYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIEVNSRVHEFWAGDK 372
Query: 141 KYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAY 200
+ + L E L+ + + +GY+P T+ VL ++ +E KE+ + SE+LA+A+
Sbjct: 373 SHPRAAEIYGLLES-----LTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFHSEKLAIAF 427
Query: 201 GLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
GL+STP G +LRI KNLR+CG+CH K +S I REI +RD
Sbjct: 428 GLLSTPAGSSLRIIKNLRVCGDCHTAAKFVSRIAGREIFMRDS 470
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
R + DG +P+ + + V++ C G V++G+ F +T+++ + P +H+ ++DL GR
Sbjct: 207 RMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFFLDITKEFGVEPGEKHYGCMIDLLGRS 266
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTE 174
+ A IR M A+++ W + G+ ++ L + A Y+
Sbjct: 267 GDLEAAEVMIRRMPFQATAMNWAIFLAACKVHSDTERGKRAAEKVLELEPVPAAYVS--- 323
Query: 175 YVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L ++ A E Q R A GL PGR+ I+ N R+
Sbjct: 324 --LSNIYAAAGEWDQVDRVRSAMKAMGL-QKDPGRS-SIEVNSRV 364
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 60/85 (70%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L ++ + GY+P T V+ DL++ KE+ SERLAVA+G++ +PPG +R+ KNLR+
Sbjct: 508 LVSEMRKRGYVPDTSSVMHDLEEHEKEQHLFVHSERLAVAFGILKSPPGSVIRVVKNLRV 567
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CH +K +S+I R+IIVRD +
Sbjct: 568 CGDCHTVMKFISAIAQRKIIVRDAS 592
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++PN TFVG+I AC G V +G Q F+S+ R+Y + P ++H+ +DL R ++E
Sbjct: 332 GMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDLLSRSGYLSE 391
Query: 120 AREFIRNMQIDASSVVWETL----EKYAQTEPGLLLG---------EPSSSLRLSN 162
A + I M + W L +K+ T+ L + +PS+ + LSN
Sbjct: 392 AEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSN 447
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 58/84 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS K K+AGY+P VL D+D E KEK SE+LA+A+GLI TP G +RI KNLRI
Sbjct: 953 LSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRI 1012
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
C +CHNF K LS + RE+ +RDK
Sbjct: 1013 CVDCHNFAKFLSRVYGREVSLRDK 1036
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHF-ESVTRDYDINPTLEHFLGIVDLYGRLQ 115
E + V+P+ TF+ V++ C G D G + F E V + P +EH+ +VDL+GR
Sbjct: 773 EENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAG 832
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
++ EA EFI+ M + ++ +W +L + + +GE + L + ++AG
Sbjct: 833 RVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAG 885
>gi|308080542|ref|NP_001183145.1| uncharacterized protein LOC100501514 [Zea mays]
gi|238009628|gb|ACR35849.1| unknown [Zea mays]
Length = 332
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 123/280 (43%), Gaps = 50/280 (17%)
Query: 11 REREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNW 65
R RE ALE +L+ G++ I +LN C L++ G+ E G+ P
Sbjct: 41 RSRE---ALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALLAAMEEEYGIVPKV 97
Query: 66 STFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL---QKIAE--- 119
+ ++ G G V+E F S+ D LG L+ L Q++A+
Sbjct: 98 EHYGCMVDLLGRAGRVEEAFDLVRSMKAKPDA-AMWASLLGACRLHKNLALGQRVADYLV 156
Query: 120 ------AREFIRNMQIDASSVVWETLEKY--------AQTEPG------------LLLGE 153
+ ++ + A++ W + + Q EPG + G+
Sbjct: 157 ANGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGD 216
Query: 154 PS--------SSLRLSNKKKDA-GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIS 204
S + L N A G++P+TE VL DLD AKE+ SE+LA+A+GLIS
Sbjct: 217 RSHPRSAEIYAKLEEVNSIARARGHVPHTELVLHDLDDAAKERALAVHSEKLALAFGLIS 276
Query: 205 TPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
TPP ++I KNLR C +CH +K +S R+I+ RD+
Sbjct: 277 TPPRTGIKIVKNLRACADCHAVLKLVSEATGRKIVFRDRN 316
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 58/84 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS K K+AGY+P VL D+D E KEK SE+LA+A+GLI TP G +RI KNLRI
Sbjct: 486 LSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRI 545
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
C +CHNF K LS + RE+ +RDK
Sbjct: 546 CVDCHNFAKFLSRVYGREVSLRDK 569
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHF-ESVTRDYDINPTLEHFLGIVDLYGRLQ 115
E + V+P+ TF+ V++ C G D G + F E V + P +EH+ +VDL+GR
Sbjct: 306 EENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAG 365
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
++ EA EFI+ M + ++ +W +L + + +GE + L + ++AG
Sbjct: 366 RVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAG 418
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 10/140 (7%)
Query: 1 DLNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDG 60
D+ ++ +C R V L D + I I + +D + L+ +R + +G
Sbjct: 154 DMYAKAGKICEARRVFDGLPERDVVSCTAI------ISGYAQLGLDEEALDLFRRLQREG 207
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTR-DYDINPTLEHFLGIVDLYGRLQKIAE 119
+R N+ T+ V+TA A+D G Q V R L++ L +D+Y + +
Sbjct: 208 MRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSL--IDMYSKCGSLTY 265
Query: 120 AREFIRNMQIDASSVVWETL 139
+R +M + + + W +
Sbjct: 266 SRRIFDSMP-ERTVISWNAM 284
>gi|224088870|ref|XP_002308572.1| predicted protein [Populus trichocarpa]
gi|222854548|gb|EEE92095.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 49 LLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESV-TRDYDINPTLE-HFLG 106
+ EA K E+ + P+ + V+ AC G + G E + R +++PT + H++
Sbjct: 214 VFEAIKVIESMAISPDPVLWAMVLCACRIHGLAELG----EKIGNRLIELDPTYDGHYVQ 269
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVV--WETLEKYAQTE---PGLLLGEPSSSLR-- 159
+ +Y +K + R M +S V W +E + G E S ++
Sbjct: 270 LASIYANSRKWEDVVRVRRLMAERNTSKVAGWSLIEARGKVHRFVAGHREHEQSLEIQKM 329
Query: 160 ---LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKN 216
+ + AGY+P VL D+ +E KE SERLA+A+GL+ T PG +RI KN
Sbjct: 330 LEIIETRLAAAGYVPNVSPVLHDIGEEEKENAIKVHSERLAIAFGLLVTGPGSCIRIVKN 389
Query: 217 LRICGECHNFIKKLSSIENREIIVRDKT 244
LR+C +CH K +S + REIIVRD +
Sbjct: 390 LRVCWDCHEVTKMISRVFEREIIVRDGS 417
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+RF N+G+ P TFVGV+ AC G V EG +F+ +T Y I P +EH+ +VDL GR
Sbjct: 151 ERFLNEGLHPMNVTFVGVLNACSRAGLVKEGRHYFQMMTDSYGIEPEMEHYGCMVDLLGR 210
Query: 114 LQKIAEAREFIRNMQIDASSVVW 136
+ EA + I +M I V+W
Sbjct: 211 AGLVFEAIKVIESMAISPDPVLW 233
>gi|387169573|gb|AFJ66232.1| hypothetical protein 34G24.32 [Capsella rubella]
Length = 598
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 124/269 (46%), Gaps = 44/269 (16%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
A+ V +++ + DS + +L C LLE GK F + ++P + ++
Sbjct: 314 AIRVFSEMEAEHVSPDSITFLGILTACSHCGLLEEGKEFFGLMSQRFSIQPKLEHYGAMV 373
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR-------LQKIAEAR--EF 123
G G V E + ES+ + D+ L Y +Q +++A+ ++
Sbjct: 374 DLLGRAGQVKEAYDLIESMPIEPDV-VIWRSLLSSARTYKNPELGEIAIQNLSKAKSGDY 432
Query: 124 IRNMQIDASSVVWETLEKYAQ--TEPGLLLGEPSSSLR---------------------- 159
+ I +S+ WE +K + T+ G+ + S +
Sbjct: 433 VLLSNIYSSTKKWENAQKVRELMTKEGIRKAKGKSWVEFGGVIHRFKAGDTSHIDTKAIY 492
Query: 160 -----LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIK 214
L K K G++ T+ VL D+ +E KE+ Y SE+LA+AY ++ + PG +RI+
Sbjct: 493 KVLEGLIQKAKSEGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGSEIRIQ 552
Query: 215 KNLRICGECHNFIKKLSSIENREIIVRDK 243
KN+R+C +CHN+IK +S + NR II+RD+
Sbjct: 553 KNIRMCSDCHNWIKAVSKLLNRVIIMRDR 581
>gi|190612933|gb|ACE80844.1| pentatricopeptide repeat protein [Fossombronia pusilla]
Length = 152
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 151 LGEPSSSL-RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
+GE L RL + +AGY+P T VL DL+++ K ++ SE+LA+AYGLISTPPG
Sbjct: 49 IGEIHEELQRLLEQMVEAGYVPDTRSVLHDLEEDEKVAHLSHHSEKLAIAYGLISTPPGT 108
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
T+RI KNLR+C +CH K +S I R ++VRD
Sbjct: 109 TIRIYKNLRVCLDCHTASKLMSKIVMRSLVVRD 141
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 59/86 (68%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL +K K+ GY P T Y L + D+ KE SE+LA+A+G+++ PPG+T+R+ KNLR
Sbjct: 825 RLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLR 884
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+CG+CH K +S +REII+RD +
Sbjct: 885 VCGDCHEMAKFMSKSASREIILRDSS 910
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 6/166 (3%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ P+ +F+ ++ AC G +DEG++ F + ++ I P LEH+ +VDL R + +
Sbjct: 650 GIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVK 709
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRD 179
A +FI+ M I + +W L + + L E + + ++ GY +L +
Sbjct: 710 AHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYY----VLLAN 765
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKK--NLRICGEC 223
+ EA++ + + + GL P + IK N+ + G+C
Sbjct: 766 IYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDC 811
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS K K+ GY+ T +VL D+++E KE+ Y SE+LAVA+G+IST PG +++ KNLR
Sbjct: 569 LSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRT 628
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CHN +K +S I R+IIVRD
Sbjct: 629 CVDCHNAMKYISKIVQRKIIVRD 651
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 16/153 (10%)
Query: 45 MDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF 104
M L+ E+ R G +P+ TFVGV++AC G VD G ++F SV + + T +H+
Sbjct: 381 MALQFFESLLR---SGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHY 437
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE----------- 153
++DL R + EA I NM + +W +L + + L E
Sbjct: 438 ACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEP 497
Query: 154 --PSSSLRLSNKKKDAGYMPYTEYVLRDLDQEA 184
P++ + LSN +AG V D+D
Sbjct: 498 ENPATYITLSNIYANAGLWTEETKVRNDMDNRG 530
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 56/81 (69%)
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
K +AGY+P T VL ++D+E KE TY SE+LA+A+GLIST P +RI KNLR+C +
Sbjct: 634 KLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCND 693
Query: 223 CHNFIKKLSSIENREIIVRDK 243
CH K LS I R IIVRD+
Sbjct: 694 CHAATKLLSKIYGRVIIVRDR 714
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+ E GV+PN TF+G++ AC G V EG + FE + + + P +EH+ +VD
Sbjct: 445 LDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVD 504
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
L GR + EA E I++M I +++VW L + LGE +++ L + ++ GY
Sbjct: 505 LLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGY 564
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 126/289 (43%), Gaps = 53/289 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----E 57
N+ + R + AL + + +K G+ D ++ +L+ C L++ G +
Sbjct: 461 NTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDR 520
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF---LGIVDLYGRL 114
+ V+P + +I G G ++E E++ R+ +P + LG ++G
Sbjct: 521 DYNVKPTSKHYTCMIDLLGRAGRLEEA----ENLMRNMPFDPGAASWGALLGASRIHGNT 576
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLR--------------- 159
+ +A E + M+ S + YA + + +G+ S +R
Sbjct: 577 ELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEV 636
Query: 160 --------------------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
L K + GY+ T+ VL D+++E KE Y S
Sbjct: 637 QNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHS 696
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
E+LAVA+G+++ P GR +R+ KNLR+C +CHN IK +S I R II+RD
Sbjct: 697 EKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRD 745
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 58/85 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K K+ GY+P + L D++ E KE +Y SERLA+ +GLIST G T+ + KNLR+
Sbjct: 560 LGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRV 619
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CH+ IK ++ I R+IIVRD T
Sbjct: 620 CGDCHSAIKLIAKIVRRKIIVRDST 644
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V P+ TF G+++AC G +G F+ + + L+H+ +VD+ GR K+ EA
Sbjct: 385 VEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEA 444
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYV-LRD 179
E IRNM + A+S+VW L L + E ++ + + + + YV L +
Sbjct: 445 EELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCS-----SAYVLLSN 499
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
L A R R G I+ PGR+ K R
Sbjct: 500 LYASASRWSDVSRIRREMKQRG-ITKQPGRSWITIKGWR 537
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L K ++ GY+ T +VL D++ E K++ Y SERLAVA+G+I+TP G +++ KNLR
Sbjct: 534 KLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAPIKVFKNLR 593
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
ICG+CH IK +S I REIIVRD
Sbjct: 594 ICGDCHTTIKLISKIVQREIIVRD 617
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G RP+ TFVGV++AC G VD+G F S+ +Y I T +H+ ++DL R
Sbjct: 359 GCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFER 418
Query: 120 AREFIRNMQIDASSVVWETL 139
A E I M + + +W +L
Sbjct: 419 AEEMINTMSVKPNKFLWASL 438
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+++ K AGY P V D+ +E KE SE+LA+A+GLI++PPG T+RI KNLR
Sbjct: 622 KMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLR 681
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+C +CHN K +S + NRE+IVRD+T
Sbjct: 682 MCMDCHNMAKLVSKVYNREVIVRDRT 707
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
+ P+ T++GV++AC G VD+G ++F +T + I P + H+ +VDL R ++ E
Sbjct: 447 SILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKE 506
Query: 120 AREFIRNMQIDASSVVWETL 139
A E I NM I A+S+VW L
Sbjct: 507 AYEVIENMPIKANSIVWGAL 526
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Query: 10 CREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKL-------LEAGKRFENDGVR 62
C+ E+ A + DK+ SPD++ + M L L +R E +
Sbjct: 317 CKCGEISIAHCIFDKMS-------SPDVVSWTAMIMGYALHGPAREALVLFERMELGNAK 369
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN TF+ V+TAC G VD+G+++F+S++ Y I PTLEHF + D GR ++ EA
Sbjct: 370 PNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYN 429
Query: 123 FIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
FI MQI ++ VW TL + + +L E
Sbjct: 430 FISKMQIKPTASVWSTLLRACRVHKNTMLAE 460
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
S + G++P TE V +D+++E K SE+LA+ +G+ISTP G +R+ KNLR+
Sbjct: 543 FSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRV 602
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH K +S + +REI+VRD
Sbjct: 603 CIDCHTVTKFISKLADREIVVRD 625
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L ++AGY P +VL D+D+E K Y SE+LAVAYGL+ P G +R+ KNLR
Sbjct: 610 KLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLR 669
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH+ IK ++ + REII+RD
Sbjct: 670 VCGDCHSAIKLIAKVTGREIILRD 693
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+ GV P+ TF+GV++AC G V EG + FE++ Y + P +EH+ +VDL GR ++
Sbjct: 432 SSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQV 491
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYT 173
EA + + M ++ ++VW L +T L L E + + K+AG PY
Sbjct: 492 NEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAG--PYV 545
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 47/273 (17%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
+ AL + DK++ + D + +L+ C + LL+ G+ + ++ G+ P +
Sbjct: 322 REALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTC 381
Query: 71 VITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYG--RLQKIAEAREFIRNMQ 128
++ G G +D+ + + + + LG ++ L +I+ R Q
Sbjct: 382 MVWLLGRGGHLDKAVKLIDEIPFQPSV-MVWRALLGACVIHNDIELGRISAQRVLEMEPQ 440
Query: 129 IDASSVV----------WETL--------EKYAQTEPGLLLGEPSSSLR----------- 159
A+ V+ W+ + K + EPGL E ++
Sbjct: 441 DKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPE 500
Query: 160 ----------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
L K K AGY+P VL D++ E KE+ SERLA+++G+I TP G
Sbjct: 501 VRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGS 560
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KNLRIC +CH IK +S + REI+VRD
Sbjct: 561 PIRIMKNLRICVDCHAAIKCISKVVQREIVVRD 593
>gi|190612707|gb|ACE80731.1| pentatricopeptide repeat protein [Diplophyllum albicans]
Length = 152
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 56/85 (65%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+S + ++AGY P T +VL D D+E K Y SE+LA+AYGLISTPPG LRI KNLR+
Sbjct: 59 MSAQLEEAGYAPDTGHVLHDFDEEEKVSHLGYHSEKLAIAYGLISTPPGSLLRIFKNLRV 118
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
C +CH +S I R I VRD +
Sbjct: 119 CNDCHTATAFISKITGRVISVRDGS 143
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 58/85 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K K+ GY+P + L D++ E KE +Y SERLA+ +GLIST G T+ + KNLR+
Sbjct: 576 LGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRV 635
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CH+ IK ++ I R+IIVRD T
Sbjct: 636 CGDCHSAIKLIAKIVRRKIIVRDST 660
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V P+ TF G+++AC G +G F+ + + L+H+ +VD+ GR K+ EA
Sbjct: 401 VEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEA 460
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYV-LRD 179
E IRNM + A+S+VW L L + E ++ + + + + YV L +
Sbjct: 461 EELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCS-----SAYVLLSN 515
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
L A R R G I+ PGR+ K R
Sbjct: 516 LYASASRWSDVSRIRREMKQRG-ITKQPGRSWITIKGWR 553
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 79/139 (56%), Gaps = 8/139 (5%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQT-EPGLLLGEPSSSLRLSNKKK---- 165
GR + ++ R+FI + ++ S W K G +L P ++ L+ ++
Sbjct: 550 GRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEELDGL 609
Query: 166 --DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
++GY +VL D+D+E K + Y SER AVAYGL+ P G +R+ KNLR+CG+C
Sbjct: 610 LMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKNLRVCGDC 669
Query: 224 HNFIKKLSSIENREIIVRD 242
H+ IK ++ I +REII+RD
Sbjct: 670 HSAIKLITKITSREIILRD 688
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 39 ELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDIN 98
E L + DL+L R DG+ T++GV+TAC G V EG + F S+ + I
Sbjct: 417 EALGIFDDLRL----ARMAPDGI-----TYIGVLTACSYTGKVKEGREIFNSMGMNSSIR 467
Query: 99 PTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL 158
H+ +VDL GR + EA + I NM ++ +++W L + + E ++
Sbjct: 468 LGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKK 527
Query: 159 RLSNKKKDAGYMPYT 173
L + AG PY
Sbjct: 528 LLELEPGSAG--PYV 540
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 113/264 (42%), Gaps = 84/264 (31%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-------------------------- 94
+RP TFVGV+ AC G VD GF+ F S+TRD
Sbjct: 375 LRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEA 434
Query: 95 YDINPTLEH-----FLGIV----------DLYGRLQKIAEAR------EFIRNMQIDASS 133
YD+ T++ LG + +L ++ K+ E R ++ + ASS
Sbjct: 435 YDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASS 494
Query: 134 VVWETL--------EKYAQTEPG------------LLLGEPSSSLRLSNKKK-------- 165
W+ E Q EPG LLG+ LR K++
Sbjct: 495 GKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGD----LRHPRKERIYEKLEEL 550
Query: 166 -----DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRIC 220
GY P E VL+D++ KE SERLA+ YGLIST P +R+ KNLR+C
Sbjct: 551 NRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVC 610
Query: 221 GECHNFIKKLSSIENREIIVRDKT 244
+CH+ IK ++ I R+++VRD+
Sbjct: 611 YDCHSAIKLIAKITRRKVVVRDRN 634
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG- 106
+ LEA + + + VRPN T V V++AC GA++ G + S R ++I L F+G
Sbjct: 261 RALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG-RWVHSYMRKFEIELNL--FVGN 317
Query: 107 -IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
++++Y R I EA+ M+ D + + T+
Sbjct: 318 ALINMYSRCGSIDEAQTVFDEMK-DRDVITYNTM 350
>gi|356532565|ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Glycine max]
Length = 569
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 59/84 (70%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K G+ P T+ VL D+ +E KE+ + SE+LA+AY ++ T PG +RI KNLRI
Sbjct: 469 LIQRAKLEGFTPLTDLVLMDVSEEEKEENLMFHSEKLAMAYAVLKTSPGTKIRISKNLRI 528
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
C +CHN+IK +S I NR+IIVRD+
Sbjct: 529 CLDCHNWIKIVSKILNRKIIVRDR 552
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
R E + V P+ TF+G++TAC G V+EG ++F + + I P LEH+ +VDL GR
Sbjct: 291 RMEMEHVLPDSITFIGILTACSHCGLVEEGRKYFGMMQNRFMIQPQLEHYGTMVDLLGRA 350
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
+ EA I+ M+++ V+W L + LGE
Sbjct: 351 GLMEEAYAVIKEMRMEPDIVIWRALLSACRIHRKKELGE 389
>gi|383165816|gb|AFG65812.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
gi|383165818|gb|AFG65813.1| Pinus taeda anonymous locus 2_9455_01 genomic sequence
Length = 156
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 61/83 (73%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K+AGY+P T++VL D+++E K+ + SE+LA+A+GLISTPP ++ + KNLR+
Sbjct: 56 LAGQMKEAGYLPDTDFVLHDVEEEQKKDLLCHHSEKLAIAFGLISTPPWTSITVTKNLRV 115
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH K +S + REI +RD
Sbjct: 116 CGDCHRATKFISKVVGREINMRD 138
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 58/85 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K K+ GY+P ++ D++ E KE+ +Y SERLA+ +GLIST G T+ + KNLRI
Sbjct: 612 LGGKLKELGYVPDPKFSFHDVETEQKEEMLSYHSERLAIGFGLISTVEGSTIIVMKNLRI 671
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CHN +K S + REI+VRD +
Sbjct: 672 CGDCHNAVKLTSKVVGREIVVRDPS 696
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V P+ T G+++ACG G + +G F+ +++ I T EH+ +VDL GR ++ EA
Sbjct: 437 VDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEA 496
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDL 180
I M A+ +VW L + + + E ++ L + + YT +L +L
Sbjct: 497 EALIHIMPGKANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSA--AYT--LLSNL 552
Query: 181 DQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIK 228
+ + + + G++ P + IK G HNFI
Sbjct: 553 YASTGKWTEVSKIRKKMKDEGILKQPGSSWITIK------GIKHNFIS 594
>gi|326532850|dbj|BAJ89270.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 118/269 (43%), Gaps = 44/269 (16%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR-FENDGVRPNWSTFVGVITACG 76
AL++ D++ I D I +L C L++ G R F V PN + V+ G
Sbjct: 298 ALKLFDEMPTC-IEPDEVTYIAVLCGCNHAGLVDEGLRVFHGMRVPPNVKHYGTVVDLLG 356
Query: 77 CFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYG--RLQKIAEAR----------EFI 124
G + E + +S+ DI + LG +G L ++A + +++
Sbjct: 357 RAGRLAEAYDTIKSMPFPADI-VLWQTLLGASKTHGDVELAEVAATKLTELGSNVDGDYV 415
Query: 125 RNMQIDASSVVWETLEKYAQTE--------PGLLLGEPSSSLR----------------- 159
+ AS W + + T PG E S +
Sbjct: 416 LLSNVYASKARWADVGRVRDTMRSNDVRKVPGFSYTEISGVMHKFINGDKEHPRLQEIYR 475
Query: 160 ----LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKK 215
+ ++ + GY P T VL D+ +E K+ +Y SE+LA+A+GLI+TPPG TLR+ K
Sbjct: 476 ALGEIMSRIGELGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLIATPPGETLRVIK 535
Query: 216 NLRICGECHNFIKKLSSIENREIIVRDKT 244
N+RICG+CH K +S R II+RD+
Sbjct: 536 NIRICGDCHVVAKLISKAYGRAIIIRDRA 564
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
G++P T VL D+D+E KE + SE+LA+++GLI T PG T+RI KNLR+CG CH+
Sbjct: 646 GFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSAT 705
Query: 228 KKLSSIENREIIVRDKT 244
K +S I NREII RD+
Sbjct: 706 KLISKIFNREIIARDRN 722
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 58 NDGV-RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
N G+ RP+ TFVGV++AC G VD G Q+F S+ +DY I+P L+H+ ++DL R +K
Sbjct: 459 NKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEK 518
Query: 117 IAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
EA ++NM+++ +W +L + + GE + + ++AG
Sbjct: 519 FEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAG 570
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+PN TF+G++ AC C GA+D G + ++ + + ++D+Y + I A
Sbjct: 360 VKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAA 419
Query: 121 REFIRNMQ 128
R+M
Sbjct: 420 ERVFRSMH 427
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 119/279 (42%), Gaps = 59/279 (21%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
AL++ DK++ G D + +L C +++ G + + G+ P + I
Sbjct: 565 ALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAI 624
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTL-------------------EHFLG------- 106
FG +D+ ++ +D + PT EH L
Sbjct: 625 DLLARFGRLDKAWK----TVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNA 680
Query: 107 --------IVDLY---GRLQKIAEAREFIRNMQIDA-SSVVWETLEKYAQTEPGLLLGEP 154
I ++Y GR + +A R ++ I W +K + +G+
Sbjct: 681 ENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTAS---FFVGDR 737
Query: 155 SSSLR---------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIST 205
S L L ++ K GY+P T + L D+D+E K SE+LA+AYGL++T
Sbjct: 738 SHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTT 797
Query: 206 PPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
PG +RI KNLR+CG+CH+ +S I + EI+VRD +
Sbjct: 798 FPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 836
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+++ K AGY P V D+ +E KE SE+LA+A+GLI++PPG T+RI KNLR
Sbjct: 643 KMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLR 702
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+C +CHN K +S + NRE+IVRD+T
Sbjct: 703 MCMDCHNMAKLVSKVYNREVIVRDRT 728
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
+ P+ T++GV++AC G VD+G ++F +T + I P + H+ +VDL R ++ E
Sbjct: 468 SILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKE 527
Query: 120 AREFIRNMQIDASSVVWETL 139
A E I NM I A+S+VW L
Sbjct: 528 AYEVIENMPIKANSIVWGAL 547
>gi|242081959|ref|XP_002445748.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
gi|241942098|gb|EES15243.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
Length = 760
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 136/319 (42%), Gaps = 77/319 (24%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
NS+++ ++KAA + +++ ++ F S I+ + + L K+ + V
Sbjct: 426 NSQIEMYRCTGDLKAAKKTFERIPSLDTFSWSQMILSYAVHGHEREALLLFKKMRDCSVI 485
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
N F+ V+ AC G +DEGF+H+ES+ DY P ++H +VDL G + K+A+A +
Sbjct: 486 INEFAFLAVLVACSHQGLIDEGFRHYESMVSDYSFVPDVKHIACMVDLLGHVGKVADAED 545
Query: 123 FIRNMQIDASSVVWE-----------------------TLEKYAQTEPGLLL------GE 153
FI + ++ SV+W TLE +A + +L G+
Sbjct: 546 FINSSGLENDSVLWHTLLRACRIHGDKDRGIKTGEKLMTLEPFAASSYVMLYNLYMDAGK 605
Query: 154 PSSSLRLSNKKKDAGY-----MPYTEYV-----LRDLDQEAKEKPQTY------------ 191
S ++R + ++ G + + E+ D D +K T+
Sbjct: 606 ISLAMRTRGQMRERGMTKESGVSWAEFGGSCQHFVDGDNSCSQKDATFTRLEELLVRVKQ 665
Query: 192 RSER--------------------------LAVAYGLISTPPGRTLRIKKNLRICGECHN 225
++ER LAVA GL + P +R+ KN R+ E H
Sbjct: 666 KTERSSMNVWELGFQNRKVSENSIGKHGELLAVALGLSTLPNTAPVRVMKNQRMSWEGHE 725
Query: 226 FIKKLSSIENREIIVRDKT 244
+K LS ENREII+RD T
Sbjct: 726 TLKLLSESENREIIIRDPT 744
>gi|302805647|ref|XP_002984574.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
gi|300147556|gb|EFJ14219.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
Length = 369
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 8/188 (4%)
Query: 63 PNWSTFVGVITACGCFGAVDEG-------FQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
P+ + +++AC + VD G + F + Y + ++ G + R++
Sbjct: 164 PHAAVLKSLLSACRSYKDVDRGERIAKRMLESFWDESMPYVVLASIYRAAGKWEEAARIR 223
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLR-LSNKKKDAGYMPYTE 174
+ R ++ A V E A + + + L+ LS+ K AGY+P T
Sbjct: 224 SLMVERGVRKDPGRSAIEVEGRVFEFVAGDMSHVQMNPIRAKLQELSSAMKKAGYVPDTS 283
Query: 175 YVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIE 234
VL D+ +E KE+ + SE+LAVA+GL++TP G +R+ KNLR+C +CH+ K +S+IE
Sbjct: 284 LVLHDVAEEEKEQVLLWHSEKLAVAFGLLNTPAGSPIRVIKNLRVCKDCHDAAKLISAIE 343
Query: 235 NREIIVRD 242
R I+ RD
Sbjct: 344 QRRIVFRD 351
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 5/163 (3%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ L +R + G +PN+ TFV +++AC G V+EG ++F+ +T Y I P +H+ +
Sbjct: 81 RALATFQRMQEQGHKPNYVTFVHLLSACSHKGLVEEGRKYFDLMTARYGIAPDAQHYACM 140
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VDL GR + EA F+ M + V ++L ++ + GE + L + ++
Sbjct: 141 VDLLGRAGYLDEAEGFLNRMPGAPHAAVLKSLLSACRSYKDVDRGERIAKRMLESFWDES 200
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
MPY VL + + A + + R L V G + PGR+
Sbjct: 201 --MPYV--VLASIYRAAGKWEEAARIRSLMVERG-VRKDPGRS 238
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 113/264 (42%), Gaps = 84/264 (31%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-------------------------- 94
+RP TFVGV+ AC G VD GF+ F S+TRD
Sbjct: 332 LRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEA 391
Query: 95 YDINPTLEH-----FLGIV----------DLYGRLQKIAEAR------EFIRNMQIDASS 133
YD+ T++ LG + +L ++ K+ E R ++ + ASS
Sbjct: 392 YDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASS 451
Query: 134 VVWETL--------EKYAQTEPG------------LLLGEPSSSLRLSNKKK-------- 165
W+ E Q EPG LLG+ LR K++
Sbjct: 452 GKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGD----LRHPRKERIYEKLEEL 507
Query: 166 -----DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRIC 220
GY P E VL+D++ KE SERLA+ YGLIST P +R+ KNLR+C
Sbjct: 508 NRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVC 567
Query: 221 GECHNFIKKLSSIENREIIVRDKT 244
+CH+ IK ++ I R+++VRD+
Sbjct: 568 YDCHSAIKLIAKITRRKVVVRDRN 591
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG- 106
+ LEA + + + VRPN T V V++AC GA++ G + S R ++I L F+G
Sbjct: 218 RALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG-RWVHSYMRKFEIELNL--FVGN 274
Query: 107 -IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
++++Y R I EA+ M+ D + + T+
Sbjct: 275 ALINMYSRCGSIDEAQTVFDEMK-DRDVITYNTM 307
>gi|9758246|dbj|BAB08745.1| unnamed protein product [Arabidopsis thaliana]
Length = 511
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 126/276 (45%), Gaps = 58/276 (21%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
A+ V +++ + DS + LL C LLE GK + ++P + ++
Sbjct: 227 AIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMV 286
Query: 73 TACGCFGAVDEGFQHFESVTRDYDI--------------NPTLEHFLGIVDLYGRLQKIA 118
G G V E ++ ES+ + D+ NP L +Q ++
Sbjct: 287 DLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEI--------AIQNLS 338
Query: 119 EAR--EFIRNMQIDASSVVWETLEKYAQ--TEPGLLLGEPSSSLR--------------- 159
+A+ +++ I +S+ WE+ +K + ++ G+ + S L
Sbjct: 339 KAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSH 398
Query: 160 ------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPP 207
L K K G++ T+ VL D+ +E KE+ Y SE+LA+AY ++ + P
Sbjct: 399 IETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSP 458
Query: 208 GRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
G +RI+KN+R+C +CHN+IK +S + NR II+RD+
Sbjct: 459 GTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDR 494
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 119/279 (42%), Gaps = 59/279 (21%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
AL++ DK++ G D + +L C +++ G + + G+ P + I
Sbjct: 458 ALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAI 517
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTL-------------------EHFLG------- 106
FG +D+ ++ +D + PT EH L
Sbjct: 518 DLLARFGRLDKAWK----TVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNA 573
Query: 107 --------IVDLY---GRLQKIAEAREFIRNMQIDA-SSVVWETLEKYAQTEPGLLLGEP 154
I ++Y GR + +A R ++ I W +K + +G+
Sbjct: 574 ENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTAS---FFVGDR 630
Query: 155 SSSLR---------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIST 205
S L L ++ K GY+P T + L D+D+E K SE+LA+AYGL++T
Sbjct: 631 SHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTT 690
Query: 206 PPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
PG +RI KNLR+CG+CH+ +S I + EI+VRD +
Sbjct: 691 FPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 729
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 72/110 (65%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L A + ++G+ P+ TF G+++AC G V+EG +HF S+ RD+ I+PT++H +
Sbjct: 701 KALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACM 760
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSS 157
VD+ GR+ K E +FI+ MQ+ ++++WET+ ++ L+LGE +++
Sbjct: 761 VDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAAN 810
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 169 YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIK 228
Y+P TEYVL ++ + K++ + SERLA+ + LIST + +RI KNLRIC +CH+ +K
Sbjct: 898 YVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMK 957
Query: 229 KLSSIENREIIVRD 242
+SSI N+EI+VRD
Sbjct: 958 HISSITNQEIVVRD 971
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG- 106
K L ++ + +GV+PN T G ++ C +++ G Q V + ++ + F+G
Sbjct: 600 KALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVS---DMFVGS 656
Query: 107 -IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLE-KYAQTEPG 148
+VD+Y + + EA + I ++ W T+ YAQ G
Sbjct: 657 ALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICGYAQNGQG 699
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 59/279 (21%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
AL + D+++ +G +D + +L C +++ G + +D G+ P + ++
Sbjct: 568 ALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMV 627
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIV------------------------ 108
G G ++E + + ++ + PT ++ ++
Sbjct: 628 DLLGRAGRLNEAME----LIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGA 683
Query: 109 ----------DLYG---RLQKIAEAREFIRNMQI-DASSVVWETLEKYAQTEPGLLLGEP 154
+LY R + +A R +++ I W +K T +G+
Sbjct: 684 ENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTT---FFVGDR 740
Query: 155 SSS---------LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIST 205
S L L + KD GY+P T + L D+D E K SE+LAVAYG+++T
Sbjct: 741 SHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTT 800
Query: 206 PPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
PG+ +RI KNLRICG+CH+ + +S I + EI++RD +
Sbjct: 801 APGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSS 839
>gi|297745998|emb|CBI16054.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 17/189 (8%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEG-FQHFESVTRDYD-INPTLEHFLGIVDLYGR 113
EN + PN T V V+ AC A+++G H + R D I P L G+ + GR
Sbjct: 277 LENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPMLLEARGLQKVPGR 336
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYT 173
I R+ M +D + E L LLL +LS + K+ GY+P T
Sbjct: 337 -SCIEIRRKIYSFMSVDEFNPQIEQLH-------ALLL-------KLSMEMKEKGYVPDT 381
Query: 174 EYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSI 233
+ VL DLD E KE+ SE+LA+A+GLI++ G T+RI KNLR+C +CH+ K +S
Sbjct: 382 KVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKF 441
Query: 234 ENREIIVRD 242
NREI+VRD
Sbjct: 442 ANREILVRD 450
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 72/110 (65%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K L A + ++G+ P+ TF G+++AC G V+EG +HF S+ RD+ I+PT++H +
Sbjct: 701 KALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACM 760
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSS 157
VD+ GR+ K E +FI+ MQ+ ++++WET+ ++ L+LGE +++
Sbjct: 761 VDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAAN 810
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 169 YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIK 228
Y+P TEYVL ++ + K++ + SERLA+ + LIST + +RI KNLRIC +CH+ +K
Sbjct: 898 YVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMK 957
Query: 229 KLSSIENREIIVRD 242
+SSI N+EI+VRD
Sbjct: 958 HISSITNQEIVVRD 971
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG- 106
K L ++ + +GV+PN T G ++ C +++ G Q V + ++ + F+G
Sbjct: 600 KALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVS---DMFVGS 656
Query: 107 -IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLE-KYAQTEPG 148
+VD+Y + + EA + I ++ W T+ YAQ G
Sbjct: 657 ALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICGYAQNGQG 699
>gi|358357200|gb|AEU08440.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 151
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + AGY+P T +VL DL+++ +E + SE+LA+A+GLISTPPG + + KNLR
Sbjct: 58 RLSTMMQVAGYVPDTRFVLHDLEEDEREFSLCHHSEKLALAFGLISTPPGTPICVIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I R +VRD
Sbjct: 118 VCGDCHTATKFISKIVGRAFVVRD 141
>gi|145359106|ref|NP_199912.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635749|sp|Q9FI49.2|PP428_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g50990
gi|332008636|gb|AED96019.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 126/276 (45%), Gaps = 58/276 (21%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
A+ V +++ + DS + LL C LLE GK + ++P + ++
Sbjct: 250 AIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMV 309
Query: 73 TACGCFGAVDEGFQHFESVTRDYDI--------------NPTLEHFLGIVDLYGRLQKIA 118
G G V E ++ ES+ + D+ NP L +Q ++
Sbjct: 310 DLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEI--------AIQNLS 361
Query: 119 EAR--EFIRNMQIDASSVVWETLEKYAQ--TEPGLLLGEPSSSLR--------------- 159
+A+ +++ I +S+ WE+ +K + ++ G+ + S L
Sbjct: 362 KAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSH 421
Query: 160 ------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPP 207
L K K G++ T+ VL D+ +E KE+ Y SE+LA+AY ++ + P
Sbjct: 422 IETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSP 481
Query: 208 GRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
G +RI+KN+R+C +CHN+IK +S + NR II+RD+
Sbjct: 482 GTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDR 517
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 120/248 (48%), Gaps = 34/248 (13%)
Query: 13 REVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPN---WSTFV 69
R +K +M ++++ G +D LL+ +K +A + +N V+PN W T +
Sbjct: 348 RRMKEEFGIMPRIEHYGCMVD------LLSRAGLVK--QAYEYIQNMPVQPNAVTWRTLL 399
Query: 70 GVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQI 129
G T G G + H + + + L + +LY + A+ + R+M
Sbjct: 400 GACTIHGHLGLGETARSHLLKLEPKHSGDYVL-----LSNLYTSECRWADVQLIRRSMLK 454
Query: 130 DASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA--------------GYMPYTEY 175
D + Y+ E G + E + R + +D GY+P+T
Sbjct: 455 DGV----KKTSGYSLVELGNRVYEFTMGNRSHPQSQDVYALLEKITELLKLEGYVPHTAN 510
Query: 176 VLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIEN 235
VL D+++E KE+ +Y SE+ A+A+ ++T PG T+R+ KNLR+C +CH IK ++ + +
Sbjct: 511 VLADIEEEEKEQALSYHSEKXAIAFMRLNTAPGTTIRVMKNLRVCADCHMAIKLMAKVYD 570
Query: 236 REIIVRDK 243
REI++RD+
Sbjct: 571 REIVIRDR 578
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 5/128 (3%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE + E G+ P+ TFVGV+ AC G +DEGF +F + ++ I P +EH+ +VD
Sbjct: 309 LELFREMEGQGLVPSEITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVD 368
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
L R + +A E+I+NM + ++V W TL L LGE + S L + K +G
Sbjct: 369 LLSRAGLVKQAYEYIQNMPVQPNAVTWRTLLGACTIHGHLGLGETARSHLLKLEPKHSG- 427
Query: 170 MPYTEYVL 177
+YVL
Sbjct: 428 ----DYVL 431
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 58/79 (73%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K AGY+P VL D+D++ KE + SE+LA+A+GL+ST PG +R+ KNLR+C +CH
Sbjct: 485 KSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCH 544
Query: 225 NFIKKLSSIENREIIVRDK 243
+ +K +S + NREIIVRD+
Sbjct: 545 SAMKFISEVYNREIIVRDR 563
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
+++A+ V ++ + + I+ L LK LE + V+P+ TFVGV+ A
Sbjct: 259 IESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAA 318
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G V+EG +F S+ Y I P++EH+ +VD+ GR +IAEA + I+NM +
Sbjct: 319 CSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYF 378
Query: 135 VWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSE 194
V L + L++ E ++ + K+ G T +L ++ K +
Sbjct: 379 VLVGLLSACRIHGNLVVAERAAQQLIELDPKNGG----TYVLLSNIYSSMKNWEAAKKMR 434
Query: 195 RLAVAYGLISTPPGRTLRIKKNLRICGECHNFIK 228
L V I PPG + + + G H F+K
Sbjct: 435 ELMVERN-IKKPPGCS-----AIEVGGVVHEFVK 462
>gi|358357154|gb|AEU08417.1| pentatricopeptide repeat protein [Atrichum undulatum]
Length = 152
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 57/84 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + KD GY+P T VL ++D+E KE+ SERLA+AYGLI P G+ +R+ KNLR
Sbjct: 58 RLTERIKDEGYIPDTRVVLENIDEEDKERVLCSHSERLAIAYGLICIPDGKPIRVYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S + REI+ RD
Sbjct: 118 VCSDCHTATKFISKVTGREIVARD 141
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 5/170 (2%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE + + +GV+P+W TFVG ++AC G + EG HFES+ +D++I P +EH+ +VD
Sbjct: 695 LELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVD 753
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
L+GR + EA EFI MQ+ S +W L Q + L E + +L D G
Sbjct: 754 LFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDG- 812
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+L ++ A + + ++ + G++ P + + + I
Sbjct: 813 ---VYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHI 859
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 54/84 (64%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + K GY+P T YVL D++ KE + SERLA+AYGL+ TPP + I KNLR
Sbjct: 879 RLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLR 938
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I R+II RD
Sbjct: 939 VCGDCHTATKLISKITKRQIIARD 962
>gi|359496160|ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33760-like [Vitis vinifera]
Length = 561
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 23/193 (11%)
Query: 65 WSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLY---GRLQKIAEAR 121
W+ +G AC +D G Q E + NP+ H++ + ++Y GR++++
Sbjct: 361 WTAMLG---ACKMHKNLDLGVQVAEHLLAAEPENPS--HYVLLSNVYALAGRMERV---- 411
Query: 122 EFIRNMQI--DASSVVWETLEKYAQTEPGLLLGEPSSSL---------RLSNKKKDAGYM 170
E +RNM I V ++ + Q +G+ S L + K+AGY+
Sbjct: 412 EMVRNMMIRKGLKKQVGYSIIEVGQKSYLFSMGDRSHPETTEIYKYLDELMLRSKEAGYV 471
Query: 171 PYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKL 230
P E V+ +L++E +E Y SE+LA+A+GL+ T G T+RI KNLR+C +CH+ IK +
Sbjct: 472 PAPELVMHELEEEEREYALRYHSEKLAIAFGLMKTSHGMTIRIVKNLRMCEDCHSAIKFI 531
Query: 231 SSIENREIIVRDK 243
S+I NREIIVRDK
Sbjct: 532 SNIANREIIVRDK 544
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEG-FQHFESVTRDYDINPTLEHFLGIVDLYGR 113
R GV + +TFV V++AC GA+D G + H V +D+N L ++++Y R
Sbjct: 208 RMRELGVEFDSATFVSVLSACSQSGALDLGCWVHDYIVNNSFDVNVVLG--TSLINMYTR 265
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL-EKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPY 172
+++ARE M + + V W + Y G E +R+ ++D G +P
Sbjct: 266 CGNVSKAREVFDEMN-ERNVVAWTAMISGYGMHGYGREAIELFRLMRIHGMRQDYGLVPR 324
Query: 173 TEY 175
E+
Sbjct: 325 VEH 327
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 19/147 (12%)
Query: 64 NWSTFVGVITACGCFGAVDEGFQHF-----ESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
N + +I+ G G E + F + +DY + P +EH + +VD+ GR +
Sbjct: 283 NVVAWTAMISGYGMHGYGREAIELFRLMRIHGMRQDYGLVPRVEHHVCMVDMLGRAGFLN 342
Query: 119 EAREFIRNM-QIDASSVVWETLEKYAQTEPGLLLG-------------EPSSSLRLSNKK 164
EA ++I+++ Q + + +W + + L LG PS + LSN
Sbjct: 343 EAFQYIKDLKQGEQAPALWTAMLGACKMHKNLDLGVQVAEHLLAAEPENPSHYVLLSNVY 402
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTY 191
AG M E V + ++ +K Y
Sbjct: 403 ALAGRMERVEMVRNMMIRKGLKKQVGY 429
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+ K +AGY+P T VL ++D+E KE TY SE+LA+A+GLIST P +RI KNLR+
Sbjct: 545 MRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRV 604
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
C +CH K LS I R IIVRD+
Sbjct: 605 CNDCHAATKLLSKIYGRVIIVRDR 628
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+ E GV+PN TF+G++ AC G V EG + FE + + + P +EH+ +VD
Sbjct: 359 LDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVD 418
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
L GR + EA E I++M I +++VW L + LGE +++ L + ++ GY
Sbjct: 419 LLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGY 478
>gi|190612829|gb|ACE80792.1| pentatricopeptide repeat protein [Pilularia globulifera]
Length = 152
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + K GY+P T VL D+++E KE Y SE+LA+A+GLISTPPG L + KNLR
Sbjct: 58 RLNLEMKAEGYVPDTNLVLHDVEEELKEHLLKYHSEKLAIAFGLISTPPGAPLHVVKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S + REII+RD
Sbjct: 118 LCSDCHTAAKFISKLRGREIIMRD 141
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K AGY+ T+ VL D+++E KE Y SE+LAVAYG++ PPGR +R+ KNLR+
Sbjct: 724 LDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRV 783
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH K +S+IE R II+RD
Sbjct: 784 CRDCHTAFKCISAIEGRLIILRD 806
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE +P+ T VGV+ AC G V++G +F S+ RD+ + EH+ ++D
Sbjct: 538 LEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMID 597
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
L GR ++ EA +++M + S +W L
Sbjct: 598 LLGRAGRLDEAVNLMKDMPFEPDSTMWGAL 627
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS K + GY+P T VL ++D++ KE SE+LA+A+G+++TPPG T+R+ KNLR+
Sbjct: 796 LSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 855
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH K +S I REIIVRD
Sbjct: 856 CNDCHAATKFISKIMEREIIVRD 878
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 86/213 (40%), Gaps = 34/213 (15%)
Query: 51 EAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL 110
EAG+ E +PN TF+ V AC G + EG F + D+ + PT +H+ +VDL
Sbjct: 613 EAGRGGE---AKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDL 669
Query: 111 YGRLQKIAEAREFIRNMQIDASSV-VWETLEKYAQTEPGLLLGE-------------PSS 156
GR ++ EA E + M + V W +L + + LGE S
Sbjct: 670 LGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASH 729
Query: 157 SLRLSNKKKDAGYMPYTEYVLRDLDQEA-KEKPQT----YRSERLAVAYGLISTPPGRTL 211
+ LSN AG V +++ Q K++P +R E G +S P L
Sbjct: 730 YVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQL 789
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
H F++ LS +E V D +
Sbjct: 790 ------------HGFLETLSEKMRKEGYVPDTS 810
>gi|358345888|ref|XP_003637006.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355502941|gb|AES84144.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 679
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 7/118 (5%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+F+ G++P+ F+GV AC G + EG HFES++RDY+I PT+ H++ +VD+ G +
Sbjct: 340 QFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEIVPTMAHYVSVVDMIGSI 399
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL-------RLSNKKK 165
+ EA EFI M ++ S VWETL + LG+ + L RL+ K K
Sbjct: 400 GNLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLDPSRLNEKSK 457
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + K+AGY+ T + L D+DQE KE SERLA+A GL+++P T+R+ KNLR
Sbjct: 511 RLRVQMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPARSTIRVIKNLR 570
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH +K +S + RE I+RD
Sbjct: 571 VCGDCHTALKIISDLVGREFIIRD 594
>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
Length = 721
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 107/261 (40%), Gaps = 77/261 (29%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+GV + ++F+ V+ AC G ++ + HF+ + D+D+ P E++ +VDL R ++
Sbjct: 443 EGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARSGRLG 502
Query: 119 EAREFIRNMQIDASSVVWET----------LEKYAQTEPGLLLGEPS--------SSLRL 160
+A E + +M ++ W T LE A EP SSL
Sbjct: 503 DADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLLSSLYS 562
Query: 161 SNKKKD----------------------------------AG--YMPYTEYVLRDLD--- 181
+ KKD AG P + +LR+LD
Sbjct: 563 ATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDKILRELDILN 622
Query: 182 --------------------QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
E KE+ SE+LAVA+GLIST G L + KNLR+C
Sbjct: 623 VELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKNLRVCS 682
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH IK +S + +R I VRD
Sbjct: 683 DCHGAIKLISKLRSRVITVRD 703
>gi|358347047|ref|XP_003637574.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503509|gb|AES84712.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 753
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 62/104 (59%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+F+ G++P+ F+GV AC G + EG HFES++RDY+I PT+ H++ +VD+ G +
Sbjct: 414 QFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEIVPTMAHYVSVVDMIGSI 473
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL 158
+ EA EFI M ++ S VWETL + LG+ + L
Sbjct: 474 GNLDEALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAEL 517
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + K+AGY+ T + L D+DQE KE SERLA+A GL+++P T+R+ KNLR
Sbjct: 585 RLRVQMKEAGYIAETRFCLHDVDQEDKEDALLGHSERLAIAKGLLNSPARSTIRVIKNLR 644
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH +K +S + RE I+RD
Sbjct: 645 VCGDCHTALKIISDLVGREFIIRD 668
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS K + GY+P T VL ++D++ KE SE+LA+A+G+++TPPG T+R+ KNLR+
Sbjct: 596 LSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRV 655
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH K +S I REIIVRD
Sbjct: 656 CNDCHAATKFISKIMEREIIVRD 678
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 86/213 (40%), Gaps = 34/213 (15%)
Query: 51 EAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL 110
EAG+ E +PN TF+ V AC G + EG F + D+ + PT +H+ +VDL
Sbjct: 413 EAGRGGE---AKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDL 469
Query: 111 YGRLQKIAEAREFIRNMQIDASSV-VWETLEKYAQTEPGLLLGE-------------PSS 156
GR ++ EA E + M + V W +L + + LGE S
Sbjct: 470 LGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASH 529
Query: 157 SLRLSNKKKDAGYMPYTEYVLRDLDQEA-KEKPQT----YRSERLAVAYGLISTPPGRTL 211
+ LSN AG V +++ Q K++P +R E G +S P L
Sbjct: 530 YVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQL 589
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
H F++ LS +E V D +
Sbjct: 590 ------------HGFLETLSEKMRKEGYVPDTS 610
>gi|302142629|emb|CBI19832.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 57/83 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K + GY+P T++VL D++ E KE + SE+LAV +GL+ P G T+R+ KNLRI
Sbjct: 444 LGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRI 503
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN K +S + REI+VRD
Sbjct: 504 CGDCHNAFKFMSKVVEREIVVRD 526
>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
Length = 620
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 42/203 (20%)
Query: 67 TFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLE-HFLGIVDLY---GRLQKIAEARE 122
++ ++ AC +G G + E V +++ P F+ + +LY GR + R+
Sbjct: 419 AWMTLLAACKSYGDPQRGIRCAERV---FELEPQHSGSFVVLANLYASVGRWSDASRIRK 475
Query: 123 FIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL---------------------RLS 161
+ M + + EPG E S S+ +L+
Sbjct: 476 MMERMSV--------------KKEPGCSWIELSGSVHEFISGESKHPKIREICEELEKLT 521
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+ ++AGY+P T V+ D+++ KE+ + SERLA+ +GL+ST PG T+R+ KNLR+C
Sbjct: 522 LRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCS 581
Query: 222 ECHNFIKKLSSIENREIIVRDKT 244
+CH K +SS+ REI+VRD +
Sbjct: 582 DCHAATKIISSVVGREIVVRDSS 604
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G P+ T V ++ G ++ G +HF S +D+ + P+ +VDL R +
Sbjct: 343 GFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDA 402
Query: 120 AREFI-RNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNK 163
A E I + A ++ W TL ++ G+P +R + +
Sbjct: 403 AEELILASPACQADTIAWMTLLAACKS-----YGDPQRGIRCAER 442
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 53/276 (19%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEN-----DGVRPNWSTFVGVI 72
A+E+ +K+ I + D + +L+ C + L+E GK + N + P S + +I
Sbjct: 498 AIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMI 557
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI-----VDLYGRLQKIAEAREFIRNM 127
G G ++E + + R+ I P + + + V Y L K+A + + +
Sbjct: 558 DLLGRAGLLEEAY----NFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDP 613
Query: 128 QIDASSVV----------WETLEKYAQT--EPGLLLGEPSSSLRLSNK------------ 163
+ + WE K ++ + + + S +++ NK
Sbjct: 614 NNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHP 673
Query: 164 KKDA---------------GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPG 208
++DA G++P T VL DL+QE KE+ + SE+LA+A+ LI+TP
Sbjct: 674 QRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKH 733
Query: 209 RTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
T+RI KNLR+C +CH+ I+ +S + REIIVRD T
Sbjct: 734 TTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDAT 769
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 58/85 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K + AGY+P EY L D+ +E K++ SE+LA+AYGLI P G +R+ KNLR+
Sbjct: 499 LERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRV 558
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CH+ K +S+IE R IIVRD T
Sbjct: 559 CGDCHSATKYISAIEGRVIIVRDTT 583
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ ++G++P+W TFV V++AC G VD G ++F S+ RDY + +H+ +VDL GR
Sbjct: 318 KMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRG 377
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS-NKKKDAGYM 170
K+ EA + I+ M S ++ TL + L L E ++ L+ + + AGY+
Sbjct: 378 GKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYV 434
>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 59/85 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K ++ GY+P ++ L D++ E E+ +Y SERLA+A+GL+ST G T+ I KNLR+
Sbjct: 627 LGVKLRELGYIPDQQFALHDVEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITIMKNLRV 686
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CH I ++ I NREI+VRD +
Sbjct: 687 CGDCHTAITLMAKIVNREIVVRDSS 711
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K +GV + T G+++AC G + + F R + T+EH+ +VD+ GR
Sbjct: 445 KEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGR 504
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD--AGYMP 171
++ EA +M ++A+S+VW L + L + E ++ R+ + D A Y+
Sbjct: 505 CGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAK-RIFEMEPDCSAAYV- 562
Query: 172 YTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L +L ++ + R R+ + + I PG + K +R
Sbjct: 563 ----LLSNLYASSRRWLEVARI-RMKMKHNGIVKQPGSSWITLKGMR 604
>gi|242090555|ref|XP_002441110.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
gi|241946395|gb|EES19540.1| hypothetical protein SORBIDRAFT_09g020580 [Sorghum bicolor]
Length = 516
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 59/85 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L ++ + GY+P T V+ DL++ KE+ SERLAVA+G++ +PPG +R+ KNLR+
Sbjct: 416 LVSEMRKRGYVPDTSSVMHDLEENEKEQHLFLHSERLAVAFGILKSPPGSVIRVVKNLRV 475
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CH +K +S I R+IIVRD +
Sbjct: 476 CGDCHTVMKFISEIAQRKIIVRDAS 500
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++PN TFVG+I AC G V +G Q F+S+ R+Y I P L+H+ +DL R ++E
Sbjct: 240 GMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGIKPGLQHYTCYLDLLSRSGYLSE 299
Query: 120 AREFIRNMQIDASSVVWETL----EKYAQTEPGLLLG---------EPSSSLRLSN 162
A E I M + W L +K+ T+ L + +PS+ + LSN
Sbjct: 300 AEELITTMPYEPDEASWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTYILLSN 355
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 107/197 (54%), Gaps = 18/197 (9%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFLGIVDLY---GRLQK 116
++P+ S + ++ AC G ++ G E R ++++ + +++ + ++Y G+ +
Sbjct: 361 IQPDASAWGALLNACRIHGNIELGKHASE---RLFEVDSENVGYYVLLSNIYANVGKWEG 417
Query: 117 IAEAREFIRNMQI----DASSVVW----ETLEKYAQTEPGLLLGEPSSSLR-LSNKKKDA 167
+ + R R+ + SS++ + QT P E LR L++K K
Sbjct: 418 VDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKC--EEIYRELRDLTSKIKTI 475
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+P +VL+D++++ KE SERLA+AYG+IST P +RI KNLR+CG+CH
Sbjct: 476 GYVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVT 535
Query: 228 KKLSSIENREIIVRDKT 244
K +S I REIIVRD +
Sbjct: 536 KFISIITEREIIVRDSS 552
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K LE + + + V+P+ TFV +++AC G V + F + +Y I P+L+H+ +
Sbjct: 280 KALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCM 339
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VDL+GR ++ A FI+ M I + W L + + LG+ +S ++
Sbjct: 340 VDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENV 399
Query: 168 GY 169
GY
Sbjct: 400 GY 401
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 42/203 (20%)
Query: 67 TFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLE-HFLGIVDLY---GRLQKIAEARE 122
++ ++ AC +G G + E V +++ P F+ + +LY GR + R+
Sbjct: 740 AWMTLLAACKSYGDPQRGIRCAERV---FELEPQHSGSFVVLANLYASVGRWSDASRIRK 796
Query: 123 FIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL---------------------RLS 161
+ M + + EPG E S S+ +L+
Sbjct: 797 MMERMSV--------------KKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLT 842
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+ ++AGY+P T V+ D+++ KE+ + SERLA+ +GL+ST PG T+R+ KNLR+C
Sbjct: 843 LRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCS 902
Query: 222 ECHNFIKKLSSIENREIIVRDKT 244
+CH K +SS+ REI+VRD +
Sbjct: 903 DCHAATKIISSVVGREIVVRDSS 925
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G P+ T V ++ G ++ G +HF S +D+ + P+ +VDL R +
Sbjct: 664 GFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDA 723
Query: 120 AREFI-RNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNK 163
A E I + A ++ W TL ++ G+P +R + +
Sbjct: 724 AEELILASPACQADTIAWMTLLAACKS-----YGDPQRGIRCAER 763
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 46/272 (16%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND----GVRPNWSTFVGVIT 73
ALE+ +++ + +DS + +L C L+E G R ++ GV N + V+
Sbjct: 287 ALELFEEMGKTQVEMDSVTYLAVLCACNHAGLVEEGVRLFDEMVGRGVNRNVKHYGSVVD 346
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR------------ 121
G G + E ++ S+ D+ + LG YG ++ A
Sbjct: 347 LLGRAGRLGEAYRIINSMPIVPDV-VLWQSLLGACKTYGNVEMAEMASRKLVEMGSNSCG 405
Query: 122 EFIRNMQIDASSVVWETLEKYAQTE--------PGLLLGEPSSSLR-------------- 159
+F+ + A+ WE + + + PG E +
Sbjct: 406 DFVLLSNVYAARERWEDVGRVREAMKSRDVRKVPGFSYIEVEGVIHKFVNGDQSHPDWRE 465
Query: 160 -------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
+ + K GY+ T VL D+ +E KE + SE+LAVA+GLIST G +R
Sbjct: 466 IYAKLDEIRFRIKAFGYVAETSLVLHDIGEEDKENALCHHSEKLAVAFGLISTSEGTPIR 525
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
+ KNLRICG+CH IK +S I ++EIIVRD+
Sbjct: 526 VNKNLRICGDCHVVIKLISKIYDQEIIVRDRA 557
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 44 CMDLKLLE-AGK-RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTL 101
C L+L E GK + E D V T++ V+ AC G V+EG + F+ + +N +
Sbjct: 285 CRALELFEEMGKTQVEMDSV-----TYLAVLCACNHAGLVEEGVRLFDEMV-GRGVNRNV 338
Query: 102 EHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
+H+ +VDL GR ++ EA I +M I V+W++L +T + + E +S
Sbjct: 339 KHYGSVVDLLGRAGRLGEAYRIINSMPIVPDVVLWQSLLGACKTYGNVEMAEMAS 393
>gi|361067035|gb|AEW07829.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
Length = 105
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 60/78 (76%)
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AGY+P T+ VL D+++E K+ Y SE+LA+A+GLI+TPPG ++RI KNLR+C +CH+
Sbjct: 12 AGYVPDTKCVLHDVEEEQKKYMLLYHSEKLAIAFGLINTPPGASIRIVKNLRVCDDCHSA 71
Query: 227 IKKLSSIENREIIVRDKT 244
K +S I +REI++RD +
Sbjct: 72 SKYISKIVSREIVMRDTS 89
>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 765
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 74/129 (57%), Gaps = 9/129 (6%)
Query: 39 ELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDIN 98
+ LN+ D+KL+ G+RPN TFVGV++ACG G V+E F +FE + ++Y I
Sbjct: 475 QALNLFEDMKLV---------GIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIK 525
Query: 99 PTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL 158
P ++H++ +VD+ RL ++ EA + I+ M AS +W L ++ L LG ++
Sbjct: 526 PVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQGNLELGCDAAEK 585
Query: 159 RLSNKKKDA 167
LS K KD
Sbjct: 586 LLSLKPKDT 594
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 163 KKKDAGYMPYTEYVLR-DLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
K K+ GY EYV + D ++E P Y SE+LA+ +GL + P +R+ KN +C
Sbjct: 665 KAKNLGY-EMLEYVEKSDKEKEKTSSPTIYHSEKLAITFGLENLPNSSPVRVVKNTLMCR 723
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+ HNF+K +S++ +REIIV+D
Sbjct: 724 DSHNFVKYISTLTSREIIVKD 744
>gi|190612879|gb|ACE80817.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K+AGY+P T +VL D+++E K + SE+LA+A+GL+ST PG L+I KNLR
Sbjct: 58 RLSVQMKEAGYVPDTRFVLHDVEEEDKVVRLCHHSEKLAIAFGLLSTAPGTPLQIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ IE R I+VRD
Sbjct: 118 VCVDCHTATKFIAKIEGRAIVVRD 141
>gi|361067033|gb|AEW07828.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129209|gb|AFG45289.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129210|gb|AFG45290.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129211|gb|AFG45291.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129212|gb|AFG45292.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129213|gb|AFG45293.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129214|gb|AFG45294.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129215|gb|AFG45295.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129216|gb|AFG45296.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129217|gb|AFG45297.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129218|gb|AFG45298.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129219|gb|AFG45299.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129220|gb|AFG45300.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129221|gb|AFG45301.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129222|gb|AFG45302.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129223|gb|AFG45303.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129224|gb|AFG45304.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
gi|383129225|gb|AFG45305.1| Pinus taeda anonymous locus 0_12440_01 genomic sequence
Length = 105
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 60/78 (76%)
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AGY+P T+ VL D+++E K+ Y SE+LA+A+GLI+TPPG ++RI KNLR+C +CH+
Sbjct: 12 AGYVPDTKCVLHDVEEEQKKYMLLYHSEKLAIAFGLINTPPGTSIRIVKNLRVCDDCHSA 71
Query: 227 IKKLSSIENREIIVRDKT 244
K +S I +REI++RD +
Sbjct: 72 SKYISKIVSREIVMRDTS 89
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%)
Query: 155 SSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIK 214
S + +S+K + AGY P T VL +L++E KE Y SE++A A+GLIST PG+ +RI
Sbjct: 535 SMLVEISDKLRLAGYRPITTQVLLNLEEEDKENALHYHSEKMATAFGLISTSPGKPIRIV 594
Query: 215 KNLRICGECHNFIKKLSSIENREIIVRDK 243
KNLRIC +CH+ IK +S + R+I VRD+
Sbjct: 595 KNLRICEDCHSSIKLISKVYKRKITVRDR 623
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ GVRP+ ++ ++TAC G V+EG ++F + + P +EH+ +VDL GRL
Sbjct: 359 KMRQAGVRPSDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRL 418
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
+ EA EFI NM I V+W+ L + + +G+ +++ + D+G
Sbjct: 419 GLLDEAEEFILNMPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSG 472
>gi|296083546|emb|CBI23541.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 58/85 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K + AGY+P EY L D+ +E K++ SE+LA+AYGLI P G +R+ KNLR+
Sbjct: 285 LERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRV 344
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CH+ K +S+IE R IIVRD T
Sbjct: 345 CGDCHSATKYISAIEGRVIIVRDTT 369
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%)
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
D G++P T VL D+++E KE SE+LA+A GLISTP G +RI KNLR+C +CH+
Sbjct: 391 DGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHS 450
Query: 226 FIKKLSSIENREIIVRDKT 244
F+K S + NREI+ RD++
Sbjct: 451 FLKVTSKVYNREIVARDRS 469
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ E D + P+ TF+ ++ AC G VDEG F+++ + I P +EH+ +VDL R
Sbjct: 203 QMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRA 262
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
+K+ +A FI NM I A+SV+W TL
Sbjct: 263 RKVDDALAFIENMPIKANSVLWATL 287
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ L C+ ++++A EV ++++ + + + L + L ++ + +
Sbjct: 50 NAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIE 109
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
P+ T VGV++AC GA+D+G ++ + ++IN L +VD+Y + I A +
Sbjct: 110 PDEITLVGVLSACAQTGALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQ 168
Query: 123 FIRNMQI 129
R M++
Sbjct: 169 VFRRMRV 175
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 58/79 (73%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K AGY+P VL D+D++ KE + SE+LA+A+GL+ST PG +R+ KNLR+C +CH
Sbjct: 616 KSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCH 675
Query: 225 NFIKKLSSIENREIIVRDK 243
+ +K +S + NREIIVRD+
Sbjct: 676 SAMKFISEVYNREIIVRDR 694
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 11/225 (4%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
+++A+ V ++ + + I+ L LK LE + V+P+ TFVGV+ A
Sbjct: 390 IESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAA 449
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G V+EG +F S+ Y I P++EH+ +VD+ GR +IAEA + I+NM +
Sbjct: 450 CSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYF 509
Query: 135 VWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSE 194
V L + L++ E ++ + K+ G T +L ++ K +
Sbjct: 510 VLVGLLSACRIHGNLVVAERAAQQLIELDPKNGG----TYVLLSNIYSSMKNWEAAKKMR 565
Query: 195 RLAVAYGLISTPPGRTLRIKKNLRICGECHNFIK-KLSSIENREI 238
L V I PPG + + + G H F+K +S ++ EI
Sbjct: 566 ELMVERN-IKKPPGCS-----AIEVGGVVHEFVKGDVSHPQSSEI 604
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 55/83 (66%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K K AGY P T YVL D+ +E KE SE+LAVA+G+++TP LR+ KNLRI
Sbjct: 579 LPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRI 638
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH + +S I RE+IVRD
Sbjct: 639 CGDCHTAMVFISEIYGREVIVRD 661
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++P+ TF G+++ C G VD G ++F ++ Y INP +EH+ + DL GR ++AE
Sbjct: 403 GIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAE 462
Query: 120 AREFIRNMQIDASSVVWETL 139
A + + M + A +W +L
Sbjct: 463 ASKLVGEMPMPAGPSIWGSL 482
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
E+ GVRPNW T + V+ AC ++ G Q E R +N + + +Y +
Sbjct: 297 EDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACR-MGLNSNASVLIALTAMYAKCGS 355
Query: 117 IAEAREFIRNMQIDASSVV-WETL-EKYAQTEPGL 149
+ +AR + + +++ W T+ YA GL
Sbjct: 356 LVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGL 390
>gi|356565103|ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g47530-like [Glycine max]
Length = 515
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 111/261 (42%), Gaps = 77/261 (29%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGF-QHFESVTRDYDINP------------------- 99
G+RP+ T GV++AC G VDEG F+ ++R++ + P
Sbjct: 238 GIRPDDQTLTGVLSACSYSGMVDEGMMSFFDRMSREFGVTPNVHHYGCMVDLLGHAGLLD 297
Query: 100 ----------------TLEHFLGIVDLYGRLQ------------KIAEAREFIRNMQIDA 131
T LG ++G + K EA + + + I +
Sbjct: 298 KAXQLIMSMVEKPDSTTWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDHVLLLNIYS 357
Query: 132 SSVVWETL--------EKYAQTEPGL-----------LLGEPSSSLR----------LSN 162
S+ WE + K QT PG + + S R +++
Sbjct: 358 SAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGVVHEFVVDDVSHTRNHEIYETLDEINH 417
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
+ + AGY+ L +D + K ++ SE+LA+A+G+++TPPG TLR+ NLRIC +
Sbjct: 418 QLRIAGYVVELSSELHKMDDKEKGYVLSHHSEKLAIAFGVLATPPGTTLRVANNLRICVD 477
Query: 223 CHNFIKKLSSIENREIIVRDK 243
C NF+K S + N ++I+RD
Sbjct: 478 CFNFLKHFSGVYNGDVILRDH 498
>gi|302809294|ref|XP_002986340.1| hypothetical protein SELMODRAFT_123858 [Selaginella moellendorffii]
gi|300145876|gb|EFJ12549.1| hypothetical protein SELMODRAFT_123858 [Selaginella moellendorffii]
Length = 203
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 61/86 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
R + + +DAGY+P T+ +L D+ +E KE+ Y SE++AVA+GLIST G LRI KNLR
Sbjct: 102 RPAREMRDAGYVPDTKEILHDVGEEQKEELLHYHSEKMAVAFGLISTEQGSPLRILKNLR 161
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+CG+CH+ IK +S + R I VRD +
Sbjct: 162 VCGDCHSAIKFVSKMVGRSITVRDAS 187
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 77/261 (29%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL-------- 110
+GV+P+ T+ ++ C G++++G+++F + + + PT +HF +VDL
Sbjct: 539 EGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLF 598
Query: 111 ---------------------------YGRLQKIAEARE------------FIRNMQIDA 131
+G+L+ A E +I I A
Sbjct: 599 DAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYA 658
Query: 132 SSVVWETL--------EKYAQTEPGLLLGEPSSSL---------------------RLSN 162
+ +WE + E+ + PGL E L RL
Sbjct: 659 AHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHG 718
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIST-PPGRTLRIKKNLRICG 221
+ AGY+P T+ VL D+ + KE Y SE++A+A+GL+S+ G +R+ KNLR+C
Sbjct: 719 LMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCS 778
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH K ++ I R+IIVRD
Sbjct: 779 DCHTATKFIARIAGRDIIVRD 799
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 22/132 (16%)
Query: 18 ALEVMDKLKN---------IGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTF 68
A EV DK+K IG ++ + D E L E ++ + +G + +TF
Sbjct: 261 AREVFDKMKKRDMVSWNVMIGCYVLNGDFHEAL---------ELYQKLDMEGFKRTKATF 311
Query: 69 VGVITACGCFGAVDEG-FQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNM 127
V ++ AC A+ +G H + R D + +V++Y + + EAR+ M
Sbjct: 312 VSILGACSSVKALAQGRLVHSHILERGLDSEVAVA--TALVNMYAKCGSLEEARKVFNAM 369
Query: 128 QIDASSVVWETL 139
+ + +V W TL
Sbjct: 370 K-NRDAVAWSTL 380
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 55/83 (66%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K K AGY P T YVL D+ +E KE SE+LAVA+G+++TP LR+ KNLRI
Sbjct: 542 LPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRI 601
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH + +S I RE+IVRD
Sbjct: 602 CGDCHTAMVFISEIYGREVIVRD 624
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++P+ TF G+++ C G VD G ++F ++ Y INP +EH+ + DL GR ++AE
Sbjct: 366 GIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAE 425
Query: 120 AREFIRNMQIDASSVVWETL 139
A + + M + A +W +L
Sbjct: 426 ASKLVGEMPMPAGPSIWGSL 445
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
E+ GVRPNW T + V+ AC ++ G Q E R +N + + +Y +
Sbjct: 260 EDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACR-MGLNSNASVLIALTAMYAKCGS 318
Query: 117 IAEAREFIRNMQIDASSVV-WETL-EKYAQTEPGL 149
+ +AR + + +++ W T+ YA GL
Sbjct: 319 LVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGL 353
>gi|326506208|dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 582
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQE-AKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+ + K AGY P T VL D+D E KE SERLA+A+GLIST PG +RI KNLR
Sbjct: 481 ICQQLKVAGYAPDTSQVLLDIDDEDVKESSLALHSERLALAFGLISTAPGTPIRIVKNLR 540
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CHN IK LS I R I+VRD
Sbjct: 541 VCGDCHNAIKLLSKIYGRCIMVRD 564
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ LE R E+ G PN TF ++ AC G V+EG +FE +T I P + H+ +
Sbjct: 293 RALELFTRMESSGFVPNKITFNTLLNACSHGGFVEEGIGYFERMTNSSSIEPDIAHYGCM 352
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD- 166
VDL+ R +A E I+ M ++ + VW+ L +T LG+ + + D
Sbjct: 353 VDLFCRAGLFEKAEEMIQMMPMEPDAAVWKALVGACRTYSNFELGKKAGHRLIEAAPNDH 412
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AGY+ + D + + Y+ +L + G+ P ++ + G H F
Sbjct: 413 AGYVLLSNIYALDGNWKG-----VYKVRKLMLNCGVQKVPGSSSIELD------GVIHEF 461
Query: 227 IK 228
I
Sbjct: 462 IS 463
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 58/80 (72%)
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
K K+ GY+P T +V+ +DQ+ +E Y SE++A+A+ L++TPPG T+ IKKN+R+CG+
Sbjct: 527 KIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGD 586
Query: 223 CHNFIKKLSSIENREIIVRD 242
CH+ IK S REIIVRD
Sbjct: 587 CHSAIKLASKAVGREIIVRD 606
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+RPN +F+ V+TAC G +DEG+ ++E + +D I H++ IVDL GR +
Sbjct: 349 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNR 407
Query: 120 AREFIRNMQIDASSVVWETL 139
A FI M I+ ++ +W+ L
Sbjct: 408 ALRFIEEMPIEPTAAIWKAL 427
>gi|302768253|ref|XP_002967546.1| hypothetical protein SELMODRAFT_88678 [Selaginella moellendorffii]
gi|300164284|gb|EFJ30893.1| hypothetical protein SELMODRAFT_88678 [Selaginella moellendorffii]
Length = 281
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL ++AGY+P TE VL D+++E KE+ Y SE+ A+A+GLISTP G LR+ KNLR
Sbjct: 180 RLGVLMREAGYVPDTEVVLMDVEEEEKEQVLCYHSEKQAMAFGLISTPSGTPLRVVKNLR 239
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S I R+I VRD
Sbjct: 240 VCTDCHTATKFISKITGRQITVRD 263
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 68 FVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNM 127
FV V++ C G + + F S+ +DY ++P E++ I+DL GRL ++ + + + NM
Sbjct: 13 FVKVMSGCNHAGLLKDARNWFVSMLQDYGLSPVNENYACILDLLGRLGQLQDVEDLLENM 72
Query: 128 QIDASSVVWETLEKYAQTEPGLLLG-EPSSSLRLSNKKKDAGYM 170
++ + W + + + G + L N++ A Y+
Sbjct: 73 TLEPDFIAWMSFLNACKVHKDMKRGVRAAQRLVQLNRRNSASYV 116
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%)
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AGY P E+ L ++++E KEK + SE+LAVA+G I P G +++ KNLRICG+CH
Sbjct: 563 AGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKA 622
Query: 227 IKKLSSIENREIIVRDKT 244
IK +S IE REIIVRD T
Sbjct: 623 IKFISEIEKREIIVRDTT 640
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
++ +RP+W TFV V+ AC G V+ G +FES+ RDY + P +H+ +VDL GR K+
Sbjct: 378 DNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKL 437
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS-NKKKDAGYM 170
EA + IR+M + V+ TL + + L E ++ L N + AGY+
Sbjct: 438 EEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV 491
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%)
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
D G++P T VL D+++E KE SE+LA+A GLISTP G +RI KNLR+C +CH+
Sbjct: 593 DGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHS 652
Query: 226 FIKKLSSIENREIIVRDKT 244
F+K S + NREI+ RD++
Sbjct: 653 FLKVTSKVYNREIVARDRS 671
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ E+D + P+ TF+ ++ AC G VDEG F+++ + I P +EH+ +VDL R
Sbjct: 405 QMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRA 464
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
+K+ +A FI NM I A+SV+W TL
Sbjct: 465 RKVDDALAFIENMPIKANSVLWATL 489
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ L C+ ++++A EV ++++ + + + L + L ++ + + +
Sbjct: 252 NAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIE 311
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
+ T VGV++AC GA+D+G ++ + ++IN L +VD+Y + I A +
Sbjct: 312 LDEITLVGVLSACAQTGALDQG-KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQ 370
Query: 123 FIRNMQIDASSVVWETL 139
R M++ + W L
Sbjct: 371 VFRRMRV-RNVFTWNAL 386
>gi|190612653|gb|ACE80704.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K+AGY+P T VL D+++E K + SE+LA+A+GL+ST PG LRI K+LR
Sbjct: 58 RLSEQMKEAGYVPDTRLVLHDVEEEEKILRLCHHSEKLAIAFGLLSTVPGTPLRIYKSLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ +E REI+VRD
Sbjct: 118 VCTDCHTATKIIAKVEGREIVVRD 141
>gi|302808794|ref|XP_002986091.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
gi|300146239|gb|EFJ12910.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
Length = 604
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 106/262 (40%), Gaps = 73/262 (27%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
+ +GVRPN TFVGV+ AC G V EG HF S+ RD+++ PT H ++D+ GR
Sbjct: 327 MQQEGVRPNDVTFVGVLEACCHGGFVPEGRFHFASLVRDHELRPTAHHVHCMLDMLGRAG 386
Query: 116 KIAEAREFIRNMQIDASSVVWE----TLEKYAQTEPGLLLGEP---------SSSLRLSN 162
K+ EA FI M + ++ W + Y E G E + L L++
Sbjct: 387 KLEEAESFIARMPVKEEAITWSIFLGSCRSYGDLERGKRAAEKVFEFLPHCRAGYLTLAS 446
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEK-----------------------PQ-----TYRSE 194
DAG E V R ++ +K PQ +Y E
Sbjct: 447 MYTDAGMPEEAEAVARLMESRCPKKEPGSSKIVVRGRVHEFCVRSQWHPQAKEIYSYLDE 506
Query: 195 RLAVAYGLISTP----------------------------PGR---TLRIKKNLRICGEC 223
A A L P PG+ + I KNLR+C +C
Sbjct: 507 LHARALELGYVPDTRPLLLGSVERKLHSERLALAFGAMSVPGKRNSPIHIIKNLRVCRDC 566
Query: 224 HNFIKKLS-SIENREIIVRDKT 244
H F K +S ++E REIIVRD +
Sbjct: 567 HEFTKFVSRTMEGREIIVRDTS 588
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAV-DEGFQHFESVTRDYDINPTLEHFLGIV 108
LE R + +G++ N TFV V+ AC + D H + + N L ++
Sbjct: 220 LEMFHRMDAEGIQANVITFVTVVHACVLVARITDARTIHCRIIEAGLESNTVLG--TALL 277
Query: 109 DLYGRLQKIAEAREFIRNMQIDASSVVWET-LEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
++YG+ +AEA++ + + VVW LE YA+ G P +L+L +
Sbjct: 278 NMYGKCGGLAEAKKIFDKLA-ERDVVVWSAILEAYARH------GHPRVALKLFTLMQQE 330
Query: 168 GYMP 171
G P
Sbjct: 331 GVRP 334
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L+ K +AG+ T VL DL++E KE SE+LA+A+GLIST PG +RI KNLR
Sbjct: 504 KLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEKLAIAFGLISTEPGAEIRIIKNLR 563
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CHN+ K LS I R I+VRD
Sbjct: 564 VCLDCHNWTKFLSKITKRVIVVRD 587
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+ V+P TF+ V+ AC G V EG F ++ D+ P EH+ +VD+ GR ++
Sbjct: 327 SSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQL 386
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVL 177
+A EFI+ M ++ VW L L +S ++ GY YVL
Sbjct: 387 KKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGY-----YVL 441
Query: 178 -RDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
++ ++ PQ ++A L T PG TL
Sbjct: 442 MSNIYSVERKYPQAASVRQVAKKKRLAKT-PGCTL 475
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 63/111 (56%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
DGV+PN TFVGV+ AC G V++G+ +FE + RDYDI P +EHF ++DL GR +
Sbjct: 382 DGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFE 441
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
EA E +R M I+ VVW +L + L E S + K+ GY
Sbjct: 442 EAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGY 492
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 119/273 (43%), Gaps = 51/273 (18%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
AL V D +K+ G+ + ++ +L C L+E G + G++P ++
Sbjct: 352 ALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMV 411
Query: 73 TACGCFGAVDEG--FQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA-EAREFIRNMQI 129
G G +DE F H S+ D I TL LG ++ A ARE ++
Sbjct: 412 DLLGRAGKLDEAVEFIHGMSLEPDSVIWRTL---LGACRMHKNASLAAYAAREILKLEPD 468
Query: 130 DASSVV------------------WETL-EKYAQTEPGLL---------------LGEPS 155
D + V W+ + ++ + EPG L P
Sbjct: 469 DQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPC 528
Query: 156 SSL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
S RL + K GY+P TE+VL+DL E KE Y SE++A+ +G + G+
Sbjct: 529 SDTIIQELNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGK 588
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KNLRICG+CH F K +S E R I++RD
Sbjct: 589 PIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRD 621
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 48 KLLEAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF 104
K +EA + F+ + GV PN T VGV+ AC G V++G+ +F S+ R + I P EH
Sbjct: 348 KSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHH 407
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+VDL GR K+ EA EFI M ++ SV+W TL
Sbjct: 408 NCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTL 442
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 61/282 (21%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVC------------------------------- 44
K AL++ DK++ G D + LL C
Sbjct: 597 KEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYAC 656
Query: 45 -MDL-----KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVD---EGFQHFESVTRDY 95
+DL +L +A K + + P+ + +V +++AC V+ S+ +
Sbjct: 657 VIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAEN 716
Query: 96 DINPTLEHFLGIVDLYG---RLQKIAEAREFIRNMQIDA-SSVVWETLEKYAQTEPGLLL 151
D + TL I ++Y R + +A R+ ++ I W +K + +
Sbjct: 717 DGSYTL-----ISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTAS---FFV 768
Query: 152 GEPSSSL---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGL 202
G+ S L RL + K GY+P T + L D+D E K T SE+LA+AYGL
Sbjct: 769 GDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLTEHSEKLALAYGL 828
Query: 203 ISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
++T PG +RI KNLR+CG+CH+ +S I + EIIVRD +
Sbjct: 829 LTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEIIVRDSS 870
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 25/231 (10%)
Query: 21 VMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGA 80
++D L G F D+ +IE L ++ EA G R + + +G+I A FG
Sbjct: 560 LIDLLCRSGKFSDAESVIESLPFKPTAEIWEA----LLSGCRVHGNMELGIIAADKLFGL 615
Query: 81 VDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDAS-SVVWETL 139
+ E + T + G+ +++A R+ +R+ + + W +
Sbjct: 616 IPEH-------------DGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEM 662
Query: 140 EKYAQTEPGLLLGEPSSSL------RLSNKKKDAGYMPYTEYVLRDLDQEA-KEKPQTYR 192
E T P + L + + GY+P T +VL D++ + KE T
Sbjct: 663 ETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTH 722
Query: 193 SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
SE++AVA+GL+ PPG T+RI KNLR CG+CHNF + LS + R+II+RD+
Sbjct: 723 SEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDR 773
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+RP+ T + V+TAC G VD+G ++F+S+ Y I P +H+ ++DL R K ++
Sbjct: 513 GIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSD 572
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLG 152
A I ++ ++ +WE L + + LG
Sbjct: 573 AESVIESLPFKPTAEIWEALLSGCRVHGNMELG 605
>gi|358357140|gb|AEU08410.1| pentatricopeptide repeat protein [Frullania tamarisci]
Length = 152
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS + K+ GY+P T++VL D+++E K SE+LA+A+GLI+TPPG +RI KNLR+
Sbjct: 59 LSVQMKEMGYVPDTKFVLHDVEEEKKVSRLWGHSEKLAIAFGLINTPPGTPIRIFKNLRV 118
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH K + I R IIVRD
Sbjct: 119 CGDCHTATKLIGKISGRTIIVRD 141
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 18/197 (9%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH---FLGIVDLYGRLQKI 117
++PN + ++ AC G ++ G ES+TR+ +N H ++ + ++Y Q+
Sbjct: 400 MKPNPIIWRTLVAACRAHGRLELG----ESITRNL-LNEYPAHEANYVMLSNVYALTQRW 454
Query: 118 AEAREFIRNM------QIDASSVV---WETLEKYAQTEPGLLLGEPSSSLR-LSNKKKDA 167
E E R M ++ S+V E E A E E + ++ + K
Sbjct: 455 KEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELKHV 514
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
G++ T VL DLD+E KE + SE+LA+A+ L+ TPPG +R+ KNLR+C +CH I
Sbjct: 515 GHISATSEVLLDLDEEDKEGALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAI 574
Query: 228 KKLSSIENREIIVRDKT 244
K +S + NREIIVRD++
Sbjct: 575 KCISLVYNREIIVRDRS 591
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 14/174 (8%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
+ GVRP+ F+GV+TAC G VDEG+ +F+S+ +Y I+P +EH+ +VD++GR
Sbjct: 327 MKTAGVRPDDVVFIGVLTACSHAGMVDEGYGYFDSMKMEYGIDPKIEHYGCMVDMFGRAG 386
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNK--KKDAGYMPYT 173
+ A EFI M + + ++W TL + L LGE S + L N+ +A Y+ +
Sbjct: 387 MVERAMEFIHTMPMKPNPIIWRTLVAACRAHGRLELGE-SITRNLLNEYPAHEANYVMLS 445
Query: 174 EYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
+ L Q KEK + R ++ I PG +L + + GE H FI
Sbjct: 446 N--VYALTQRWKEKSEIRRE----MSKRGIKKVPGCSL-----VELDGEVHEFI 488
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 127/290 (43%), Gaps = 53/290 (18%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR-----F 56
NS + L + + A+ V +L + G+ D + +L C L+E GK+ F
Sbjct: 419 FNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMF 478
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTL-EHFLGIVDLYGRL- 114
G++P + ++ G +G ++E + + + ++ N + L +G +
Sbjct: 479 NAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMP--FEANSVIWRALLSACRTHGNVK 536
Query: 115 ------QKIAEARE-------FIRNMQIDASSVVWE-------TLEKYA-QTEPGLLLGE 153
QK+ E + N+ DA+ WE +E + + PG E
Sbjct: 537 IGEIAGQKLLEMEAQHGARYVLLSNILADANQ--WEEARQVRKVMEDHGIRKPPGWSYIE 594
Query: 154 PSSSLR---------------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYR 192
++ ++ + K AGY+P T V+ D+D+E KE +Y
Sbjct: 595 LGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYH 654
Query: 193 SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
SE+LA+A+GL+ P T+RI KNLRIC +CH K +S I REI VRD
Sbjct: 655 SEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRD 704
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE K E G++P+ T V V++AC GA D G + + + N ++D
Sbjct: 332 LELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMD 391
Query: 110 LYGRLQKIAEAREFIR 125
+Y + I A E R
Sbjct: 392 MYAKCGSIDSALEIFR 407
>gi|77554579|gb|ABA97375.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 794
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 53/77 (68%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY P T VL D+ +E K+ Y SE+LA+A+GLI+TPPG TLR+ KNLRICG+CH
Sbjct: 495 GYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVA 554
Query: 228 KKLSSIENREIIVRDKT 244
K +S R I++RD+
Sbjct: 555 KLISKAYGRVIVIRDRA 571
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 51 EAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL 110
E R E DGV T++ V+ C G VD+G + F S+ + P ++H+ IVDL
Sbjct: 311 EMPTRIEPDGV-----TYLAVLCGCNHSGLVDDGLRVFNSMR----VAPNMKHYGTIVDL 361
Query: 111 YGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYM 170
GR ++ EA + + +M A V+W+TL A+ + L E + +NK + G
Sbjct: 362 LGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELA-----ANKLAELGSN 416
Query: 171 PYTEYVL 177
+YVL
Sbjct: 417 VDGDYVL 423
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 106/197 (53%), Gaps = 22/197 (11%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLY---GRLQKI 117
V P+ +T++ ++ AC +G + G E V + N T ++ + ++Y GR +
Sbjct: 598 VPPDAATWMALMGACRIYGDTERGRFAAERVL-ELRANHTAA-YVALCNIYSAAGRWEDA 655
Query: 118 AEAREFIRNM---------QIDASSVVWETLEK---YAQTEPGLLLGEPSSSLRLSNKKK 165
A R+ + ++ I+ S V E + + + Q+E + E R+ +
Sbjct: 656 AAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEA--IYAELE---RVMGAIE 710
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
AGY T VL D+++E KE+ + SE+LA+A+G++STP G TLR+ KNLR+C +CHN
Sbjct: 711 RAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHN 770
Query: 226 FIKKLSSIENREIIVRD 242
K +S + REI+VRD
Sbjct: 771 ASKFISKVFGREIVVRD 787
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 68 FVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNM 127
F+ +++AC G V+ G +HF ++T D+ + P EH+ +VDL GR ++A+A ++ M
Sbjct: 537 FLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAM 596
Query: 128 QIDASSVVWETL----EKYAQTEPGLLLGEPSSSLR 159
+ + W L Y TE G E LR
Sbjct: 597 PVPPDAATWMALMGACRIYGDTERGRFAAERVLELR 632
>gi|190612963|gb|ACE80859.1| pentatricopeptide repeat protein [Metzgeria furcata]
Length = 152
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS ++AGY+P T + L D + E K SE+LA+A+GLISTP G TL I KNLR
Sbjct: 58 RLSEPMREAGYVPDTRFALHDEEDENKVFHLCCHSEKLAIAFGLISTPAGATLHILKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH+ K +S I R I+VRD
Sbjct: 118 VCGDCHSATKFISKISGRTIVVRD 141
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
AL++ +++ G+ D ++ +L C +L G+ + N G+ P + ++
Sbjct: 318 ALKLFGRMEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMV 377
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHF-----LGIVDL----------------- 110
G G ++E + + + + D+ F G VDL
Sbjct: 378 DLYGRAGRLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSG 437
Query: 111 -----------YGRLQKIAEAREFI--RNMQIDASSVVWETLEKYAQTEPGLLLGEPSSS 157
GR + +A R + RN+ +A V E + + + G L +
Sbjct: 438 RYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGLCHPRAEE 497
Query: 158 LR-----LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
+ + K + GY+P T VL + +E KE P Y SE+LA+A+GL+ T PG T+R
Sbjct: 498 VYAMASDMMRKIRAEGYVPDTRDVLHAIAEEEKETPLLYHSEKLAIAFGLLHTRPGDTMR 557
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRDK 243
I KNLR+C +CH K +S + R+I+VRD+
Sbjct: 558 ITKNLRVCRDCHEATKFVSRVFERQIVVRDR 588
>gi|358357172|gb|AEU08426.1| pentatricopeptide repeat protein [Timmia megapolitana subsp.
bavarica]
Length = 152
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K GY+P T VL+++D+E KE SE+LA+A+GL+ TPPG+ +R+ KNLR
Sbjct: 58 RLSERIKAEGYIPDTRLVLQNMDEEDKELALCSHSEKLAIAFGLMRTPPGKPIRVYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S + REI+ RD
Sbjct: 118 VCSDCHTATKFISKVTRREIVARD 141
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%)
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
D G++P T VL D+++E KE SE+LA+A GLISTP G +RI KNLR+C +CH+
Sbjct: 495 DGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHS 554
Query: 226 FIKKLSSIENREIIVRDKT 244
F+K S + NREI+ RD++
Sbjct: 555 FLKVTSKVYNREIVARDRS 573
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ E+D + P+ TF+ ++ AC G VDEG F+++ + I P +EH+ +VDL R
Sbjct: 307 QMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRA 366
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
+K+ +A FI NM I A+SV+W TL
Sbjct: 367 RKVDDALAFIENMPIKANSVLWATL 391
>gi|222630733|gb|EEE62865.1| hypothetical protein OsJ_17668 [Oryza sativa Japonica Group]
Length = 620
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 53/77 (68%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY P T VL D+ +E K+ Y SE+LA+A+GLI+TPPG TLR+ KNLRICG+CH
Sbjct: 324 GYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVA 383
Query: 228 KKLSSIENREIIVRDKT 244
K +S R I++RD+
Sbjct: 384 KLISKAYGRVIVIRDRA 400
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 51 EAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL 110
E R E DGV T++ V+ C G VD+G + F S+ + P ++H+ IVDL
Sbjct: 140 EMPTRIEPDGV-----TYLAVLCGCNHSGLVDDGLRVFNSMR----VAPNMKHYGTIVDL 190
Query: 111 YGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYM 170
GR ++ EA + + +M A V+W+TL A+ + L E + +NK + G
Sbjct: 191 LGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELA-----ANKLAELGSN 245
Query: 171 PYTEYVL 177
+YVL
Sbjct: 246 VDGDYVL 252
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
+I+LL+ + E K N V+PN + ++ C V + E++
Sbjct: 412 VIDLLSRSGQFERAE--KMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEP 469
Query: 97 INP----TLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLG 152
NP TL + V L+ ++ + E ++ ASS W + + L+G
Sbjct: 470 ENPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASS--WIEVGRRVHV---FLVG 524
Query: 153 EPSSSL---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLI 203
+ S +L K + GY+ E+VL D++ E KE+ Y SERLAVA+G+I
Sbjct: 525 DKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGII 584
Query: 204 STPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+TP G +++ KNLRICG+CH IK +S I R+IIVRD
Sbjct: 585 ATPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRD 623
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
F G++P+ TFVGV++AC G VD+G + F S+ Y I T +H+ ++DL R
Sbjct: 361 FLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSG 420
Query: 116 KIAEAREFIRNMQIDASSVVWETL 139
+ A + I NM + + +W +L
Sbjct: 421 QFERAEKMIGNMAVKPNKFLWASL 444
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GYMP T VL D+ +E KE P Y SE+LA+A+GL+ T PG T+RI KNLR+C +CH
Sbjct: 507 GYMPDTSDVLHDITEEEKEVPLQYHSEKLAIAFGLLRTRPGDTVRITKNLRVCRDCHEAT 566
Query: 228 KKLSSIENREIIVRDK 243
K +S + REI+VRD+
Sbjct: 567 KFISRVFEREIVVRDR 582
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
+E E + V P+ T V V+TAC G V +G +F + + Y I P +EH+ +VD
Sbjct: 313 IELFHEMEREDVAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQRYGIEPKMEHYGCMVD 372
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
L+GR + EA++ I +M ++ V L + L LGE
Sbjct: 373 LFGRAGLLDEAKKVIDDMPMEPDIGVLGALFGACKIHRDLDLGE 416
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 13/141 (9%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL---------RLS 161
G ++A+ R+ +++ I ++ W ++ T ++G+ S + L
Sbjct: 722 GMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHT---FIVGDKSHPMTKEIYAKLVELG 778
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+ AG++P + L DLD+ KE ++ SERLAVA+ L+STPPG +R+KKNLRIC
Sbjct: 779 DLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICR 838
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH K +S I +REII+RD
Sbjct: 839 DCHVAFKFISKIVSREIIIRD 859
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ LE R ++G+ PN T V+ AC G VDE ++F S+ + I+ T EH+ +
Sbjct: 589 RALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCM 648
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+DL GR K+ +A E + +M A++ +W L
Sbjct: 649 IDLLGRAGKLDDAMELVNSMPFQANASIWGAL 680
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 13/141 (9%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL---------RLS 161
G ++A+ R+ +++ I ++ W ++ T ++G+ S + L
Sbjct: 722 GMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHT---FIVGDKSHPMTKEIYAKLVELG 778
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+ AG++P + L DLD+ KE ++ SERLAVA+ L+STPPG +R+KKNLRIC
Sbjct: 779 DLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICR 838
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH K +S I +REII+RD
Sbjct: 839 DCHVAFKFISKIVSREIIIRD 859
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ LE R ++G+ PN T V+ AC G VDE ++F S+ + I+ T EH+ +
Sbjct: 589 RALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCM 648
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+DL GR K+ +A E + +M A++ +W L
Sbjct: 649 IDLLGRAGKLDDAMELVNSMPFQANASIWGAL 680
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
+N GV+PN TF V+TAC G V+EG F ++ RDY++ PT+EH+ +VDL GR
Sbjct: 335 MQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRAG 394
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEY 175
+ EA FI+ M + ++V+W +L K Q + LGE + + G Y
Sbjct: 395 LLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEILIEMDSNHGG-----RY 449
Query: 176 V-LRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
V + ++ K+ + + RL G++ P + ++ G H F+
Sbjct: 450 VHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLE------GTTHEFL 496
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 9/205 (4%)
Query: 49 LLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFES-VTRDYDINPTLEHFLGI 107
L EA + + ++PN + ++ AC ++ G + E + D + H I
Sbjct: 396 LNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEILIEMDSNHGGRYVHMANI 455
Query: 108 VDLYGRLQKIAEAREFIRNMQI------DASSVVWETLEKYAQTEPGLLLGEPSSSLRLS 161
+ + K AE R +R + A S+ T E A + E + R
Sbjct: 456 HAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTTHEFLAGDRSHAEIQEIRTKWRFV 515
Query: 162 NKK-KDAGYMPYTEYVLRDL-DQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+K ++ GY+P E +L DL D E KE SE+LA+ YGL+ T PG T+RI KNLR+
Sbjct: 516 RRKLEENGYVPELEDMLLDLVDDEEKEAIVHQHSEKLAITYGLMKTKPGTTIRIMKNLRV 575
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
C +CH + +S I R+I++RD+T
Sbjct: 576 CKDCHKVMNLISKIYKRDIVMRDRT 600
>gi|220061995|gb|ACL79585.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 589
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 53/77 (68%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY P T VL D+ +E K+ Y SE+LA+A+GLI+TPPG TLR+ KNLRICG+CH
Sbjct: 497 GYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVA 556
Query: 228 KKLSSIENREIIVRDKT 244
K +S R I++RD+
Sbjct: 557 KLISKAYGRVIVIRDRA 573
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 51 EAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL 110
E R E DGV T++ V+ C G VD+G + F S+ + P ++H+ IVDL
Sbjct: 313 EMPTRIEPDGV-----TYLAVLCGCNHSGLVDDGLRVFNSMR----VAPNMKHYGTIVDL 363
Query: 111 YGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYM 170
GR ++ EA + + +M A V+W+TL A+ + L E + +NK + G
Sbjct: 364 LGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELA-----ANKLAELGSN 418
Query: 171 PYTEYVL 177
+YVL
Sbjct: 419 VDGDYVL 425
>gi|220061997|gb|ACL79586.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 587
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 53/77 (68%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY P T VL D+ +E K+ Y SE+LA+A+GLI+TPPG TLR+ KNLRICG+CH
Sbjct: 495 GYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVA 554
Query: 228 KKLSSIENREIIVRDKT 244
K +S R I++RD+
Sbjct: 555 KLISKAYGRVIVIRDRA 571
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 51 EAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL 110
E R E DGV T++ V+ C G VD+G + F S+ + P ++H+ IVDL
Sbjct: 311 EMPTRIEPDGV-----TYLAVLCGCNHSGLVDDGLRVFNSMR----VAPNMKHYGTIVDL 361
Query: 111 YGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYM 170
GR ++ EA + + +M A V+W+TL A+ + L E + +NK + G
Sbjct: 362 LGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELA-----ANKLAELGSN 416
Query: 171 PYTEYVL 177
+YVL
Sbjct: 417 VDGDYVL 423
>gi|190612787|gb|ACE80771.1| pentatricopeptide repeat protein [Ptilidium pulcherrimum]
Length = 152
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 56/85 (65%)
Query: 158 LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
+RLS + GY P T +VL D++ + K Y SE+LA+A+GLIST PG +RI KNL
Sbjct: 57 VRLSEEMNKVGYKPDTSFVLHDVEDQEKVSQLCYHSEKLAIAFGLISTAPGTPIRIFKNL 116
Query: 218 RICGECHNFIKKLSSIENREIIVRD 242
R+CG+CH K ++ + R IIVRD
Sbjct: 117 RVCGDCHTASKFIAQLTGRAIIVRD 141
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 13/141 (9%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL---------RLS 161
G+ + +AE R +R+ ++ + W ++ T L+G+ S LS
Sbjct: 751 GKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYT---FLVGDRSHYRSQEIYAKLDELS 807
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+ AGY+P E L D++Q KE + SE+LAVA+GLI+TP G +R+KKNLR+C
Sbjct: 808 DLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCV 867
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH K + I +REIIVRD
Sbjct: 868 DCHTAFKYICKIVSREIIVRD 888
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+GV PN T V V+ AC G V E +FES+ + P EH+ ++DL GR KI
Sbjct: 629 EGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKIN 688
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL 158
EA E + M +A++ VW L A+ + LG ++ +
Sbjct: 689 EAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEM 728
>gi|357124741|ref|XP_003564056.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Brachypodium distachyon]
Length = 594
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 44/269 (16%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR-FENDGVRPNWSTFVGVITACG 76
AL + D++ I D I +L C L++ G R F + V PN + V+ G
Sbjct: 312 ALRLFDEMPTF-IEPDEVTYIAVLCGCNHAGLVDDGLRVFHSMRVLPNVKHYGAVVDLLG 370
Query: 77 CFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYG--RLQKIAEAR----------EFI 124
G + E + S+ DI + LG +G L ++A + +++
Sbjct: 371 RAGRLAEAYDTIVSMPFPADI-VLWQTLLGAAKTHGDVELAELAATKLDELGSNVDGDYV 429
Query: 125 RNMQIDASSVVWETLEKYAQTE--------PGLLLGEPSSSLR----------------- 159
+ AS W + + T PG E S +
Sbjct: 430 LLSNVYASKARWADVRRVRDTMRSNDVRKVPGFSYTEISGVMHKFINGDKEHPRWQEIYR 489
Query: 160 ----LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKK 215
+ ++ + GY P T VL D+ +E K+ +Y SE+LA+A+GLI+TPPG TLR+ K
Sbjct: 490 ALEEIVSRIGELGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLIATPPGETLRVIK 549
Query: 216 NLRICGECHNFIKKLSSIENREIIVRDKT 244
NLR CG+CH K +S R II+RD+
Sbjct: 550 NLRTCGDCHVVAKLISKAYGRVIIIRDRA 578
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 13/141 (9%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL---------RLS 161
G+ + +AE R +R+ ++ + W ++ T L+G+ S LS
Sbjct: 778 GKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYT---FLVGDRSHYRSQEIYAKLDELS 834
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+ AGY+P E L D++Q KE + SE+LAVA+GLI+TP G +R+KKNLR+C
Sbjct: 835 DLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCV 894
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH K + I +REIIVRD
Sbjct: 895 DCHTAFKYICKIVSREIIVRD 915
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+GV PN T V V+ AC G V E +FES+ + P EH+ ++DL GR KI
Sbjct: 656 EGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKIN 715
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSL 158
EA E + M +A++ VW L A+ + LG ++ +
Sbjct: 716 EAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEM 755
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 14/172 (8%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV PN+ TFVGV++AC G VDEG +HF+ + Y I P EH+ +V+L+GR K+
Sbjct: 614 GVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHA 673
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG--YMPYTEYVL 177
A+EFI M I+ ++ VW +L + +G ++ + L D+G + Y
Sbjct: 674 AKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYAS 733
Query: 178 RDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKK 229
R L +A++ Q G++ P + + K E H FI +
Sbjct: 734 RGLWSDAQKLRQGMDCA------GVVKEPGYSWIEVMK------EVHTFIAR 773
>gi|190612793|gb|ACE80774.1| pentatricopeptide repeat protein [Radula complanata]
Length = 152
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS ++AGY P T +VL D++ E K S++L +AYGLIST PG +RI KNLR
Sbjct: 58 RLSEPMREAGYRPDTRFVLHDVEGELKISHLHLHSKKLVIAYGLISTSPGTPIRIFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH IK ++ + REIIVRD
Sbjct: 118 VCGDCHTAIKFMADVVGREIIVRD 141
>gi|218196348|gb|EEC78775.1| hypothetical protein OsI_19008 [Oryza sativa Indica Group]
Length = 580
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 53/77 (68%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY P T VL D+ +E K+ Y SE+LA+A+GLI+TPPG TLR+ KNLRICG+CH
Sbjct: 488 GYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVA 547
Query: 228 KKLSSIENREIIVRDKT 244
K +S R I++RD+
Sbjct: 548 KLISKAYGRVIVIRDRA 564
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 51 EAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL 110
E R E DGV T++ V+ C G VD+G + F S+ + P ++H+ IVDL
Sbjct: 304 EMPTRIEPDGV-----TYLAVLCGCNHSGLVDDGLRVFNSMR----VAPNMKHYGTIVDL 354
Query: 111 YGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYM 170
GR ++ EA + + +M A V+W+TL A+ + L E + +NK + G
Sbjct: 355 LGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELA-----ANKLAELGSN 409
Query: 171 PYTEYVL 177
+YVL
Sbjct: 410 VDGDYVL 416
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLD-QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
++ K K+AGY+P VL D+D +E KE + SE+LA+A+GLI+TPPG +RI KNLR
Sbjct: 438 MTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLR 497
Query: 219 ICGECHNFIKKLSSIENREIIVRDK 243
+C +CH K +S + REIIVRD+
Sbjct: 498 VCADCHEATKFISKVYKREIIVRDR 522
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V PN TFV ++ AC V+EG +F+S+ Y I P +EH+ +VDL GR + EA
Sbjct: 263 VSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEA 322
Query: 121 REFIRNMQIDASSVVWETL 139
E + NM + + +W L
Sbjct: 323 EETVFNMPMAPDATIWGAL 341
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 57/85 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ + K GY P T VL+D D++ KE + SE+LA+A+GL+ST PG T+RI KNLR+
Sbjct: 540 ITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRV 599
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
C +CH IK +S R IIVRD+
Sbjct: 600 CDDCHIAIKLISRTYKRRIIVRDRN 624
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 74/126 (58%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
++ +L V + + N +F S I+ L N L+ + ++ ++PN TF+GV++
Sbjct: 318 DIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLS 377
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
AC G VDEG+ +F S+++ YD++P +EH+ +VD+ GR ++ EA E I++M +
Sbjct: 378 ACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDA 437
Query: 134 VVWETL 139
+VW L
Sbjct: 438 IVWRAL 443
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 121/274 (44%), Gaps = 45/274 (16%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVG 70
K ALEV D+++ +G+ D ++ +L C +++ G F N GV P +
Sbjct: 250 KEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYAC 309
Query: 71 VITACGCFGAVDEGFQHFESVTRDYD------------INPTLE---------------- 102
++ G G ++E + E + + I+ +E
Sbjct: 310 MVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSEN 369
Query: 103 --HFLGIVDLYG---RLQKIAEAREFIRNMQI-DASSVVWETLEKYAQTEPGLLLGEPSS 156
+ + ++Y R + +A R ++N I W +K T P S
Sbjct: 370 DGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQS 429
Query: 157 S-----LR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
LR L+ + K GY+P T + L D+D E K SE+LA+AYG++ + PG
Sbjct: 430 KQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGAP 489
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
+RI KNLR+CG+CHN I +S I + EII+RD +
Sbjct: 490 IRITKNLRVCGDCHNAITYISMIIDHEIILRDSS 523
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 47/286 (16%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----E 57
N+ + R K AL + + +K GI D ++ +L+ C L++ G + +
Sbjct: 383 NTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQ 442
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+ G+ N + +I G G +D+ +++ + D T LG ++G +
Sbjct: 443 DYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDA-ATWGALLGASRIHGNTELG 501
Query: 118 AEAREFIRNMQID------------ASSVVWETL--------EKYAQTEPGLLLGEPSSS 157
+A + I M+ D A+S W + ++ + PG E +
Sbjct: 502 EKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNK 561
Query: 158 LR---------------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERL 196
+ L K K GY+ T+ VL D+++E K Y SE+L
Sbjct: 562 IHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKL 621
Query: 197 AVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
AVA+G+++ P GR +R+ KNLR+C +CHN +K +S I R II+RD
Sbjct: 622 AVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRD 667
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 47/286 (16%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----E 57
N+ + R K AL + + +K GI D ++ +L+ C L++ G + +
Sbjct: 464 NTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQ 523
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+ G+ N + +I G G +D+ +++ + D T LG ++G +
Sbjct: 524 DYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDA-ATWGALLGASRIHGNTELG 582
Query: 118 AEAREFIRNMQID------------ASSVVWETL--------EKYAQTEPGLLLGEPSSS 157
+A + I M+ D A+S W + ++ + PG E +
Sbjct: 583 EKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNK 642
Query: 158 LR---------------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERL 196
+ L K K GY+ T+ VL D+++E K Y SE+L
Sbjct: 643 IHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKL 702
Query: 197 AVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
AVA+G+++ P GR +R+ KNLR+C +CHN +K +S I R II+RD
Sbjct: 703 AVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRD 748
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLD-QEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
++ K K+AGY+P VL D+D +E KE + SE+LA+A+GLI+TPPG +RI KNLR
Sbjct: 523 MTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLR 582
Query: 219 ICGECHNFIKKLSSIENREIIVRDK 243
+C +CH K +S + REIIVRD+
Sbjct: 583 VCADCHEATKFISKVYKREIIVRDR 607
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V PN TFV ++ AC V+EG +F+S+ Y I P +EH+ +VDL GR + EA
Sbjct: 348 VSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEA 407
Query: 121 REFIRNMQIDASSVVWETL 139
E + NM + + +W L
Sbjct: 408 EETVFNMPMAPDATIWGAL 426
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 14/185 (7%)
Query: 48 KLLEAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF 104
K+ EA + FE ++ + PN+ TFV V++AC G V++G QH+ S+ R Y I P +EH+
Sbjct: 627 KVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHYNSMAR-YGIEPGIEHY 685
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKK 164
+V L GR ++ EAREFI M I +++VW +L + + L + ++ + +S
Sbjct: 686 ASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISIDP 745
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
D+G YV+ +K + RL + + PG++ + + GE H
Sbjct: 746 MDSG-----SYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPGQSW-----IEVNGEVH 795
Query: 225 NFIKK 229
F+ +
Sbjct: 796 IFVSR 800
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 56/80 (70%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K AG++P VL D+D E KE+ + SE+LA+A+GLISTP TLRI KNLR+C +CH
Sbjct: 892 KKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCH 951
Query: 225 NFIKKLSSIENREIIVRDKT 244
IK +S +REIIVRD T
Sbjct: 952 TAIKFISKFVDREIIVRDAT 971
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV+P+ T+VGV++AC G VD+G +++E + ++ I P + H+ +VDL+ R + E
Sbjct: 711 GVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTE 770
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
A EFI+ M + +VVW +L + L E ++ LS ++G
Sbjct: 771 AHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSG 819
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 127/290 (43%), Gaps = 53/290 (18%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKR-----F 56
NS + L + + A+ V +L + G+ D + +L C L+E GK+ F
Sbjct: 204 FNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMF 263
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTL-EHFLGIVDLYGRL- 114
G++P + ++ G +G ++E + + + ++ N + L +G +
Sbjct: 264 NAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMP--FEANSVIWRALLSACRTHGNVK 321
Query: 115 ------QKIAEARE-------FIRNMQIDASSVVWE-------TLEKYA-QTEPGLLLGE 153
QK+ E + N+ DA+ WE +E + + PG E
Sbjct: 322 IGEIAGQKLLEMEAQHGARYVLLSNILADANQ--WEEARQVRKVMEDHGIRKPPGWSYIE 379
Query: 154 PSSSLR---------------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYR 192
++ ++ + K AGY+P T V+ D+D+E KE +Y
Sbjct: 380 LGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYH 439
Query: 193 SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
SE+LA+A+GL+ P T+RI KNLRIC +CH K +S I REI VRD
Sbjct: 440 SEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRD 489
>gi|7799764|emb|CAA06832.1| DYW10 protein [Arabidopsis thaliana]
Length = 105
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%)
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AGY P E+ L ++++E KEK + SE+LAVA+G I P G +++ KNLRICG+CH
Sbjct: 12 AGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPEGSPIQVFKNLRICGDCHKA 71
Query: 227 IKKLSSIENREIIVRDKT 244
IK +S IE REIIVRD T
Sbjct: 72 IKFISEIEKREIIVRDTT 89
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 60/85 (70%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ + + GY+P T VL D+++E KE Y SERLA+A+ L+ + PG +RI KNLR+
Sbjct: 496 IAERLRCQGYVPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGSPIRIVKNLRM 555
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CH IK +S + +REIIVRD++
Sbjct: 556 CGDCHLVIKLISKVYDREIIVRDRS 580
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE E + + P T VGV+ AC G VD+GF++F + Y I P +EH +VD
Sbjct: 310 LELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVD 369
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPS 155
L GR ++ EA +I M ++ ++VVW TL L LGE +
Sbjct: 370 LLGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHKKLELGEAA 415
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 84/152 (55%), Gaps = 12/152 (7%)
Query: 104 FLGIVDLYGRLQK---IAEAREFIRNMQIDASSVVWETLE--KYAQTEPGLLLGEPSSS- 157
++ + ++Y LQK +A+ R+F+ + V T+E KY P +
Sbjct: 576 YVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGV-STIEIGKYMHDFATGDDAHPRNRE 634
Query: 158 -----LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
+L ++ K+ GY+P T+ VL +D++ KE+ SERLA+A GLISTP G LR
Sbjct: 635 IREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLR 694
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
+ KNLR+C +CH K +S I R+I+VRD T
Sbjct: 695 VTKNLRVCSDCHTATKLISKIAGRKIVVRDPT 726
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDY-DINPTLEHFLGIVDLYGR 113
R E +GVRP+ +FV ++ AC G D+G +F S+T +Y ++ T++HF + DL GR
Sbjct: 460 RMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGR 519
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
++ EA EF+ + + +V W +L
Sbjct: 520 GGRLKEAEEFLEKLPVKPDAVAWTSL 545
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIV 108
L A +R DGVRP+ TF+ + +CG ++ +G + H V +I+P + + L +
Sbjct: 43 LRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNAL--L 100
Query: 109 DLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
++Y + ++ A+ M+ + + W +
Sbjct: 101 NMYKKCGSLSHAKRVFAKMERTRNVISWSIM 131
>gi|125527635|gb|EAY75749.1| hypothetical protein OsI_03662 [Oryza sativa Indica Group]
Length = 796
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 80/260 (30%), Positives = 118/260 (45%), Gaps = 37/260 (14%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG----KRFEND-GVRPNWSTFVGVI 72
A + D+ K G DS + C L ++ G + + D GV P +V ++
Sbjct: 521 ATDFFDQFKQTGNKSDSTMFTHVFLACGILGSVDEGMLHFESMQKDFGVTPTMEHYVSIV 580
Query: 73 TACGCFGAVDEGFQHFES--VTRDYDINPTLEHFL---GIVDLYGRLQKIAEAREFIR-N 126
G G +DE + E V D+ +L + G ++L R +I E + R N
Sbjct: 581 NMLGQSGYIDEAREFVEQMPVEPSIDVWESLMNMCRLNGFLELGNRCAQIVERLDSSRLN 640
Query: 127 MQ-------IDASSVVWETLEKYA----------------QTEPGLLLGEPSSSLR-LSN 162
Q +DAS + E K A ++ P L + LR L+
Sbjct: 641 DQSKIGLFPVDASELAKEKERKKANAVEARSKVHEYRAGDRSHPEHL--KIYEELRYLAA 698
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
K+AGY+ T +VL D+DQE KE SERLAV+YGLI++ +R+ KNLR CG+
Sbjct: 699 HMKEAGYIADTRFVLHDVDQETKEDALLAHSERLAVSYGLITSAARSPIRVIKNLRSCGD 758
Query: 223 CHNFIKKLSSIENREIIVRD 242
CH +K +S + R II RD
Sbjct: 759 CHTALKIISKLVGRLIIARD 778
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 58/86 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ K +AGY P TE L D+++E KE SE+LA+A+GL+ST PG +RI KNLR
Sbjct: 686 RLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLR 745
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+C +CHN K +S + R I+VRD +
Sbjct: 746 VCLDCHNATKFISKVTQRLIVVRDAS 771
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+ P STF+ VI AC G VDEG + F +T +Y I P +EH +VDL GR K+ EA
Sbjct: 511 ILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEA 570
Query: 121 REFIRNM-QIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
E I Q VW L L + +S ++AGY
Sbjct: 571 LELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGY 620
>gi|115439809|ref|NP_001044184.1| Os01g0737900 [Oryza sativa Japonica Group]
gi|20160509|dbj|BAB89460.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113533715|dbj|BAF06098.1| Os01g0737900 [Oryza sativa Japonica Group]
gi|125571952|gb|EAZ13467.1| hypothetical protein OsJ_03384 [Oryza sativa Japonica Group]
gi|215704215|dbj|BAG93055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 796
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 80/260 (30%), Positives = 118/260 (45%), Gaps = 37/260 (14%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG----KRFEND-GVRPNWSTFVGVI 72
A + D+ K G DS + C L ++ G + + D GV P +V ++
Sbjct: 521 ATDFFDQFKQTGNKPDSTMFTHVFLACGILGSVDEGMLHFESMQKDFGVTPTMEHYVSIV 580
Query: 73 TACGCFGAVDEGFQHFES--VTRDYDINPTLEHFL---GIVDLYGRLQKIAEAREFIR-N 126
G G +DE + E V D+ +L + G ++L R +I E + R N
Sbjct: 581 NMLGQSGYIDEACEFVEQMPVEPSIDVWESLMNMCRLNGFLELGNRCAQIVERLDSSRLN 640
Query: 127 MQ-------IDASSVVWETLEKYA----------------QTEPGLLLGEPSSSLR-LSN 162
Q +DAS + E K A ++ P L + LR L+
Sbjct: 641 DQSKIGLFPVDASELAKEKERKKANAVEARSKVHEYRAGDRSHPEHL--KIYEELRYLAA 698
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
K+AGY+ T +VL D+DQE KE SERLAV+YGLI++ +R+ KNLR CG+
Sbjct: 699 HMKEAGYIADTRFVLHDVDQETKEDALLAHSERLAVSYGLITSAARSPIRVIKNLRSCGD 758
Query: 223 CHNFIKKLSSIENREIIVRD 242
CH +K +S + R II RD
Sbjct: 759 CHTALKIISKLVGRLIIARD 778
>gi|440800735|gb|ELR21770.1| pentatricopeptide (PPR) repeatcontaining protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 583
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 51/259 (19%)
Query: 33 DSPDIIELLNVCMDLKLLEAGKRFEND-------GVRPNWSTFVGVITACGCFGAVDEGF 85
D + +L+ C L+E R + + P+ V+ A G G +DE
Sbjct: 307 DGVAVNTVLSACSHAGLVEEALRVYSGLVAGRYGAIAPDIQHQTCVVDALGRAGRLDEAE 366
Query: 86 QHFESVTRDYDINPTLEHFLGIVDLYG----------RLQKIA--EAREFIRNMQIDASS 133
Q ++++R ++ T LG ++G RL+K+A +A + + A++
Sbjct: 367 QFIDTISRPSEV--TWRTLLGACRIHGDVARAERAVARLRKLAPRDAPTRVLMANVYAAA 424
Query: 134 VVWE--TLEKYAQTEPGLLLGEPSSSLR---------------------------LSNKK 164
WE LE+ + G+ S L L +
Sbjct: 425 GHWEERDLERKNMDKAGVRKRPGKSWLVVDGTRHVFTVEDKRHPRIEEIRAELAVLWQRM 484
Query: 165 KDAGYMPYTEYVLRDL-DQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
K+AG++P T VLR + D+EAKE + SE+LA+ +GL+STPPG T+R+ KNLR+C +C
Sbjct: 485 KNAGFVPNTSVVLRSMADEEAKECHLCHHSEKLAITFGLMSTPPGTTIRVFKNLRVCPDC 544
Query: 224 HNFIKKLSSIENREIIVRD 242
H K ++ + R+I+VRD
Sbjct: 545 HEATKFIAHLTGRDIVVRD 563
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 56/78 (71%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
++AGYMP T Y L+D D+E KE SER+A+A+GLI++ G LRI KNLR+CG+CH
Sbjct: 839 REAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGDCH 898
Query: 225 NFIKKLSSIENREIIVRD 242
+ K +S I R+II+RD
Sbjct: 899 SVFKMVSQIIGRKIILRD 916
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 51 EAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL 110
EA + G+RP+ TFV +++AC G VDEG +F S++ + + +EH + I+DL
Sbjct: 649 EAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDL 708
Query: 111 YGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSS-LRLSNKKKDAGY 169
GR K+ EA FI M + + +VW +L + L L ++ L + D+ Y
Sbjct: 709 LGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAY 768
Query: 170 MPYT 173
+ Y+
Sbjct: 769 VLYS 772
>gi|218192399|gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
Length = 703
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
+I+LL+ + E K N V+PN + ++ C V + E++
Sbjct: 412 VIDLLSRSGQFERAE--KMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEP 469
Query: 97 INP----TLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLG 152
NP TL + V L+ ++ + E ++ ASS W + + L+G
Sbjct: 470 ENPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASS--WIEVGRRVHV---FLVG 524
Query: 153 EPSSSL---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLI 203
+ S +L K + GY+ E+VL D++ E KE+ Y SERLAVA+G+I
Sbjct: 525 DKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGII 584
Query: 204 STPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKTT 245
++P G +++ KNLRICG+CH IK +S I R+IIVRD +
Sbjct: 585 ASPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNS 626
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 174 EYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSI 233
+ ++RD KE+ Y SERLAVA+G+I++P G +++ KNLRICG+CH IK +S I
Sbjct: 618 DIIVRD-SNSLKEQDIGYHSERLAVAFGIIASPEGSPIKVFKNLRICGDCHTAIKLISQI 676
Query: 234 ENREIIVRDKT 244
R+IIVRD
Sbjct: 677 VQRDIIVRDSN 687
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
F G++P+ TFVGV++AC G VD+G + F S+ Y I T +H+ ++DL R
Sbjct: 361 FLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSG 420
Query: 116 KIAEAREFIRNMQIDASSVVWETL 139
+ A + I NM + + +W +L
Sbjct: 421 QFERAEKMIGNMAVKPNKFLWASL 444
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 61/85 (71%)
Query: 158 LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
L+LS + K+ GY+P T+ VL DLD E KE+ SE+LA+A+GLI++ G T+RI KNL
Sbjct: 556 LKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNL 615
Query: 218 RICGECHNFIKKLSSIENREIIVRD 242
R+C +CH+ K +S NREI+VRD
Sbjct: 616 RLCEDCHSVTKFISKFANREILVRD 640
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K ++ K + G+ P+ +FV V+ AC G V+EG FES+ R + I P++EH+ +
Sbjct: 370 KAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACM 429
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VDL GR ++ EA + I +M+I+ VW +L + + L E ++S + +A
Sbjct: 430 VDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNA 489
Query: 168 GYMPYTEYV-LRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
G YV L D+ EAK + R + L A GL P + I++ +
Sbjct: 490 G-----NYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKI 535
>gi|15220333|ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g04840
gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17 [Arabidopsis thaliana]
gi|332189629|gb|AEE27750.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 108/214 (50%), Gaps = 30/214 (14%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDY-DINPTLEHFLG 106
KL EA + EN + P+ +T+ + AC +G++ ESV+++ +++P L
Sbjct: 445 KLNEAHELVENMPINPDLTTWAALYRAC----KAHKGYRRAESVSQNLLELDPELCGSYI 500
Query: 107 IVDLY----GRLQKIAEAREFIRNMQIDASSVVWETLEKYAQ--------------TEPG 148
+D G +Q + E R +I S+ W +E Q E G
Sbjct: 501 FLDKTHASKGNIQDV-EKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIG 559
Query: 149 LLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPG 208
L L E S L+ +K GY P ++ + D+++E KE SE+LA+ G + T PG
Sbjct: 560 LKLDEIIS---LAIQK---GYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPG 613
Query: 209 RTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
T+RI KNLRICG+CH+ +K +S I R+I++RD
Sbjct: 614 TTIRIIKNLRICGDCHSLMKYVSKISQRDILLRD 647
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 5/139 (3%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G +P+ F+ V+TAC VD G F+S+ DY I PTL+H++ +VDL GR K+ E
Sbjct: 389 GEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNE 448
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRD 179
A E + NM I+ W L + + G E S L + G Y+ D
Sbjct: 449 AHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCG-----SYIFLD 503
Query: 180 LDQEAKEKPQTYRSERLAV 198
+K Q RL++
Sbjct: 504 KTHASKGNIQDVEKRRLSL 522
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 84/152 (55%), Gaps = 12/152 (7%)
Query: 104 FLGIVDLYGRLQK---IAEAREFIRNMQIDASSVVWETLE--KYAQTEPGLLLGEPSSS- 157
++ + ++Y LQK +A+ R+F+ + V T+E KY P +
Sbjct: 663 YVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGV-STIEIGKYMHDFATGDDAHPRNRE 721
Query: 158 -----LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
+L ++ K+ GY+P T+ VL +D++ KE+ SERLA+A GLISTP G LR
Sbjct: 722 IREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLR 781
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
+ KNLR+C +CH K +S I R+I+VRD T
Sbjct: 782 VTKNLRVCSDCHTATKLISKIAGRKIVVRDPT 813
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDY-DINPTLEHFLGIVDLYGR 113
R E +GVRP+ +FV ++ AC G D+G +F S+T +Y ++ T++HF + DL GR
Sbjct: 547 RMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGR 606
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
++ EA EF+ + + +V W +L
Sbjct: 607 GGRLKEAEEFLEKLPVKPDAVAWTSL 632
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQ-HFESVTRDYDINPTLEHFLGIV 108
L A +R DGVRP+ TF+ + +CG ++ +G + H V +I+P + + L +
Sbjct: 130 LRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNAL--L 187
Query: 109 DLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
++Y + ++ A+ M+ + + W +
Sbjct: 188 NMYKKCGSLSHAKRVFAKMERTRNVISWSIM 218
>gi|293333548|ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea mays]
gi|238005588|gb|ACR33829.1| unknown [Zea mays]
gi|413920755|gb|AFW60687.1| hypothetical protein ZEAMMB73_143396 [Zea mays]
Length = 569
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
E+ +A V D L+ + S I N + L+ +N+GVRPN TF V+
Sbjct: 374 EIASARNVFDCLRMRSVVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNSFTFTAVLV 433
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
ACG G V+EG +HF S+ DY ++PTLEH+ +VD+ GR ++ EA E IR M +
Sbjct: 434 ACGHSGLVEEGLKHFNSILSDYQMSPTLEHYACMVDMLGRAGRLIEAYEIIRGMSLCPDK 493
Query: 134 VVW 136
VW
Sbjct: 494 CVW 496
>gi|190612903|gb|ACE80829.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 153
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 58/85 (68%)
Query: 158 LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
+RLS +AGY P T++V+ D+++E K + SE+LA+ +GLIST PG LRI KNL
Sbjct: 57 VRLSKLMAEAGYAPNTQFVMHDVEEEEKVLHLCHHSEKLAIGFGLISTAPGTPLRIYKNL 116
Query: 218 RICGECHNFIKKLSSIENREIIVRD 242
R+C +CH K ++ I REI+VRD
Sbjct: 117 RVCVDCHTATKVIAKIVEREIVVRD 141
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
Query: 136 WETLEKYAQTEPGLLLGEPSSSL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQ 189
W LEK+ L P S RL + GY+P TE+VL+DL E KE
Sbjct: 520 WIELEKHVHVFIAGDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLL 579
Query: 190 TYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
Y SE++A+A+G + G+ +RI KNLRICG+CH F K +S E R II+RD
Sbjct: 580 KYHSEKMAIAFGTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRD 632
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
+++GV PN T VGV+ AC G V++G+ +F S+ + + I P EH +VDL GR
Sbjct: 370 MKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAG 429
Query: 116 KIAEAREFIRNMQIDASSVVWETL 139
K+ EA EFIR+M ++ +V+W TL
Sbjct: 430 KLDEAVEFIRDMNLEPDAVIWRTL 453
>gi|190612907|gb|ACE80831.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + ++AGY+P T VL D+++E K + SE+LA+A+GL+ST PG LR+ KN R
Sbjct: 58 RLAGQMEEAGYVPDTRLVLHDVEEEEKAYRLCHHSEKLAIAFGLLSTAPGTPLRVYKNWR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH+ K +S I REI+VRD
Sbjct: 118 VCADCHSTTKLMSKIVGREIVVRD 141
>gi|190612651|gb|ACE80703.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 58/86 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + +DAGY+P T VL D+++E K + SE+LA+A GL+ T PG LRI KNLR
Sbjct: 58 RLSKQMRDAGYVPDTRVVLHDVEEEEKVYRLCHHSEKLAIALGLLCTVPGTPLRIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+C +CH K ++ I REIIVRD T
Sbjct: 118 VCVDCHTATKFMAKIVGREIIVRDAT 143
>gi|293334473|ref|NP_001170726.1| uncharacterized protein LOC100384813 [Zea mays]
gi|238007188|gb|ACR34629.1| unknown [Zea mays]
Length = 329
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 26/224 (11%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVD---EGFQHFESVTR 93
+I+LL C +L +A K + + P+ +V +++AC V+ ++
Sbjct: 100 VIDLLARCG--RLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKA 157
Query: 94 DYDINPTLEHFLGIVDLYG---RLQKIAEAREFIRNMQIDA-SSVVWETLEKYAQTEPGL 149
+ D + TL I ++Y R + +A R+ ++ I W +K +
Sbjct: 158 ENDGSYTL-----ISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTAS---F 209
Query: 150 LLGEPSSSL---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAY 200
+G+ S L RL + K GY+P T + L D+D E K + SE+LA+AY
Sbjct: 210 FVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLSEHSEKLALAY 269
Query: 201 GLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
GL++T PG +RI KNLR+CG+CH+ +S I + EIIVRD +
Sbjct: 270 GLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIIVRDSS 313
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+ + + G P+ +F+ ++ AC G VD+G +F+ + RDYD+ + EH+ ++D
Sbjct: 43 LDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVID 102
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
L R ++ +A + I+ M ++ S+V+W L + + L E + + ++ K ++ G
Sbjct: 103 LLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDG- 161
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKK 215
YT ++ ++ A+ R +L G+ P ++ KK
Sbjct: 162 -SYT--LISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKK 204
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V PN+ TFVGV++AC G V EG HF S+ +YDI P +EH+ +V+L+GR K+ A
Sbjct: 621 VEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAA 680
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYT 173
+EFI M I ++ VW +L +G ++ + L D+G PY
Sbjct: 681 KEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSG--PYV 731
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 79/139 (56%), Gaps = 8/139 (5%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQT-EPGLLLGEP--SSSLRLSNKKK-- 165
GR + ++ R+FI + ++ S W +K G +L P ++ LR+ K
Sbjct: 550 GRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGL 609
Query: 166 --DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
++GY +VL D+D+E K Y SER AVAYGL+ P G +R+ KNLR+CG+C
Sbjct: 610 LMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDC 669
Query: 224 HNFIKKLSSIENREIIVRD 242
H+ IK ++ I +REII+RD
Sbjct: 670 HSAIKLIAKITSREIILRD 688
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ P+ T++G +TAC G V EG + F S+T + I P EH+ +VDL GR + E
Sbjct: 429 GMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEE 488
Query: 120 AREFIRNMQIDASSVVWETL 139
A + I+NM ++ +V+W L
Sbjct: 489 AFDLIKNMPVEPDAVIWGAL 508
>gi|190612875|gb|ACE80815.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + AGY+P +++ L D+D+E SE+LA+A+GL+ST PG LRI KNL
Sbjct: 58 RLSVPMEKAGYVPDSQFGLHDVDEEENVLRLCLHSEKLALAFGLMSTAPGTPLRIFKNLT 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH + K L++IE REI+VRD
Sbjct: 118 VCGDCHTYTKFLANIEEREIVVRD 141
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 116/278 (41%), Gaps = 60/278 (21%)
Query: 17 AALEVMDKLKNIGIFLDSPDIIELLNV---CMDLKLLEAGKRFEN-----DGVRPNWSTF 68
AL++ DK++ D PD I + V C +LL+ G+ N G+ P +
Sbjct: 333 GALDLFDKMRK----EDRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHY 388
Query: 69 VGVITACGCFGAVDEGFQHFESVTRDYDINP---TLEHFLGIVDLYGRLQKIAEAREFIR 125
+I G G +DE + + R+ + P L ++G ++ A E +
Sbjct: 389 TCMIDLLGHCGQLDEAYD----LIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLI 444
Query: 126 NMQID------------ASSVVWETLEKYAQTEP--------------------GLLLGE 153
++ D A S WE +EK Q L G+
Sbjct: 445 ELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGD 504
Query: 154 PSSS---------LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIS 204
S S RL +AGY P T V D++++ K SERLA+A+GLIS
Sbjct: 505 VSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLIS 564
Query: 205 TPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
T PG L I KNLRIC +CH IK +S I REI VRD
Sbjct: 565 TSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRD 602
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 88.6 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
L+ LE +R + V PN +TFV V+ AC G +D+G Q+F +T Y + P LEHF
Sbjct: 638 LEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFAC 697
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSS--LRL 160
+VD+ GR + EA EFIR+M I+A +VVW+TL + + + E ++S LRL
Sbjct: 698 MVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRL 753
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+LS K ++ GY+P VL D+ E KE SE+LAVA+G+++T PG T+ I KNLR
Sbjct: 634 KLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLR 693
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH IK +S I +REI+VRD
Sbjct: 694 VCGDCHTAIKFISKIVDREIVVRD 717
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 10/168 (5%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV+PN+ TFV V+ AC G ++EG+ F++++ ++D+ P +EH+ +VDL GR + E
Sbjct: 459 GVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKE 518
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRD 179
A + I+ M++ VVW L + + LGE S+ K+ GY +L +
Sbjct: 519 AFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYY----VLLSN 574
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
+ +A R L GL+ PPG +L + I G H F+
Sbjct: 575 IYADAGRWEDVERMRILMKNSGLVK-PPGFSL-----VDIKGRVHVFL 616
>gi|190612981|gb|ACE80868.1| pentatricopeptide repeat protein [Lygodium japonicum]
Length = 152
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 61/86 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + K AGY P T+ VL D+D+ AKE+ Y SE+LA+A+GLISTP +L I KNLR
Sbjct: 58 RLTFEMKKAGYAPDTKVVLHDVDEVAKEQMVCYHSEKLALAFGLISTPQRTSLCIIKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+C +CH+ K +S + REI+VRD +
Sbjct: 118 MCPDCHSAFKFISKLTGREILVRDAS 143
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 120/277 (43%), Gaps = 56/277 (20%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
K A+ ++++ GI+L+ + +L C L++ GKR+ E D + P FV
Sbjct: 336 KEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYD-LEPEIDHFVT 394
Query: 71 VITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRN---- 126
V+ G G ++ + I PT G + R+ K A+ +F +
Sbjct: 395 VVALLGRAGLLNFALVFIFKMP----IEPTAA-VWGALLAACRMHKNAKVGQFAADHVFE 449
Query: 127 ------------MQIDASSVVWETLEKY--------AQTEPGLLLGEPSSSL-------- 158
I AS+ W+ + + EP E +S+
Sbjct: 450 LDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDD 509
Query: 159 -------------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIST 205
++S K + GY+P +YVL +D + +E Y SE+LA+A+ LI
Sbjct: 510 THPRAEEIYKMWGQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEM 569
Query: 206 PPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
P G T+RI KN+RICG+CH+ K +S + REI+VRD
Sbjct: 570 PAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRD 606
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 55/83 (66%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K ++ G+ TEYVL D+D+E KE SE+LA+A+GL+ T G L I KN+RI
Sbjct: 513 LVRKNREVGFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRI 572
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH F K +S IE R II+RD
Sbjct: 573 CGDCHGFAKLISLIEKRTIIIRD 595
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 16/134 (11%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA + FE +GV P+ TF +++AC G V+EG +F+ + Y + +EH+ +
Sbjct: 325 EAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCM 384
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLG----------EPSSS 157
VDL GR + +A + I++M ++ +S VW L + + LG +PS S
Sbjct: 385 VDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDS 444
Query: 158 ---LRLSNKKKDAG 168
+ LSN AG
Sbjct: 445 RNYITLSNMYSAAG 458
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 56/76 (73%)
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AGY+P T +VL+DL+ E +E Y SE+LA+ +G++S P +T+RI KNL+ICG+CH F
Sbjct: 761 AGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEKTIRIWKNLKICGDCHKF 820
Query: 227 IKKLSSIENREIIVRD 242
K ++ +E R I++RD
Sbjct: 821 AKLIAELEQRHIVIRD 836
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
N+ L C+ ++ A + +++ + S I L ++ L + + G +
Sbjct: 521 NALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPK 580
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN T +GV+ AC G V+EG+ +F S+ Y I+P EH+ ++DL GR +K+ + +
Sbjct: 581 PNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVK 640
Query: 123 FIRNMQIDASSVVWETL 139
I M + V W TL
Sbjct: 641 LIHEMNCEPDVVTWRTL 657
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 110/212 (51%), Gaps = 24/212 (11%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFLG 106
+L A K ++ ++P+ S + +++AC G VD G E + +++ P + + +
Sbjct: 603 QLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHL---FEVEPEHVGYHVL 659
Query: 107 IVDLY---GRLQKIAEAREFIR-----------NMQIDASSVVWETLEKYAQTEPGLLLG 152
+ ++Y G+ + + E R +M++D V+ T QT P +
Sbjct: 660 LSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGN---QTHP--MYE 714
Query: 153 EPSSSLR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
E L L K K GY+P +VL+D++ + KE SERLA+A+ LI+TP T+
Sbjct: 715 EMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTI 774
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
RI KNLR+CG+CH+ K +S I REIIVRD
Sbjct: 775 RIFKNLRVCGDCHSVTKFISKITEREIIVRDS 806
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K ++GV+P+ TFV +++AC G VDEG FE + DY I P+L+H+ +VD+YGR
Sbjct: 541 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGR 600
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYT 173
++ A +FI++M + + +W L + + LG+ +S + + GY
Sbjct: 601 AGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY---- 656
Query: 174 EYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+L ++ A + +A GL TP ++ + + +
Sbjct: 657 HVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEV 702
>gi|297792411|ref|XP_002864090.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297309925|gb|EFH40349.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 534
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 125/276 (45%), Gaps = 58/276 (21%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
A+ V +++ + DS + LL C LLE GK + ++P + ++
Sbjct: 250 AIRVFSEMEAEHVSPDSITFLGLLTACSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMV 309
Query: 73 TACGCFGAVDEGFQHFESVTRDYDI--------------NPTLEHFLGIVDLYGRLQKIA 118
G G V E ++ ES+ + D+ NP L +Q ++
Sbjct: 310 DLLGRAGQVKEAYELIESMPIEPDVVIWRSLLSSSRTFKNPELGEI--------AIQNLS 361
Query: 119 EAR--EFIRNMQIDASSVVWETLEKYAQ--TEPGLLLGEPSSSLR--------------- 159
+A+ +++ I +S+ WE+ +K + T+ G+ + S +
Sbjct: 362 KAKSGDYVLLSNIYSSTKKWESAQKVRELMTKEGIRKAKGKSWVEFGGVIHRFKAGDTSH 421
Query: 160 ------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPP 207
L K K G++ T+ VL D+ +E KE+ Y SE+LA+AY ++ + P
Sbjct: 422 IETKAIYKVLEGLIQKTKSEGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSP 481
Query: 208 GRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
G +RI+KN+R+C +CHN+IK +S + NR I +RD+
Sbjct: 482 GTEIRIQKNIRMCSDCHNWIKAVSKLLNRVITMRDR 517
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 23/211 (10%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEG-------FQHFESVTRDYDINPT 100
+L EA K + ++P + +++AC G V+ G F+ +S DY I
Sbjct: 365 RLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSN 424
Query: 101 LEHFLGIVDLYGRLQKIAEAREFIR---NMQIDASSVVWETLEKYAQTEPGLLLGEPSSS 157
L G D L+K + ++ I+ ++VV E G + S++
Sbjct: 425 LCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFA-------GEGVHSTSTT 477
Query: 158 LR-----LSNKKKDAGYMPYTEYVL-RDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
L L + K AGY+P T V D++ E KE Y SE+LA+ +GL++TPPG T+
Sbjct: 478 LHRALDELVKELKSAGYVPDTSLVFYADMEDEEKEIILRYHSEKLAITFGLLNTPPGTTI 537
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRD 242
R+ KNLR+CG+CHN K +S I R+II+RD
Sbjct: 538 RVVKNLRVCGDCHNAAKFISLIFGRQIILRD 568
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 58/93 (62%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+P+ TF+G++ AC G V+EGF++F +T +Y I P+++H+ +VDL GR ++ EA
Sbjct: 310 VQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEA 369
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
+FI + I + ++W TL T + +G+
Sbjct: 370 YKFIDELPIKPTPILWRTLLSACSTHGNVEMGK 402
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 26/224 (11%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVD---EGFQHFESVTR 93
+I+LL C +L +A K + + P+ +V +++AC V+ ++
Sbjct: 657 VIDLLARCG--RLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKA 714
Query: 94 DYDINPTLEHFLGIVDLYG---RLQKIAEAREFIRNMQIDA-SSVVWETLEKYAQTEPGL 149
+ D + TL I ++Y R + +A R+ ++ I W +K +
Sbjct: 715 ENDGSYTL-----ISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTAS---F 766
Query: 150 LLGEPSSSL---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAY 200
+G+ S L RL + K GY+P T + L D+D E K + SE+LA+AY
Sbjct: 767 FVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLSEHSEKLALAY 826
Query: 201 GLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
GL++T PG +RI KNLR+CG+CH+ +S I + EIIVRD +
Sbjct: 827 GLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIIVRDSS 870
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+ + + G P+ +F+ ++ AC G VD+G +F+ + RDYD+ + EH+ ++D
Sbjct: 600 LDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVID 659
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
L R ++ +A + I+ M ++ S+V+W L + + L E + + ++ K ++ G
Sbjct: 660 LLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDG- 718
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKK 215
YT ++ ++ A+ R +L G+ P ++ KK
Sbjct: 719 -SYT--LISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKK 761
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+LS K ++ GY+P VL D+ E KE SE+LAVA+G+++T PG T+ I KNLR
Sbjct: 480 KLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLR 539
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH IK +S I +REI+VRD
Sbjct: 540 VCGDCHTAIKFISKIVDREIVVRD 563
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 10/168 (5%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV+PN+ TFV V+ AC G ++EG+ F++++ ++D+ P +EH+ +VDL GR + E
Sbjct: 305 GVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKE 364
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRD 179
A + I+ M++ VVW L + + LGE S+ K+ GY +L +
Sbjct: 365 AFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYY----VLLSN 420
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
+ +A R L GL+ PPG +L + I G H F+
Sbjct: 421 IYADAGRWEDVERMRILMKNSGLVK-PPGFSL-----VDIKGRVHVFL 462
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 122/276 (44%), Gaps = 47/276 (17%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTF 68
+ + AL+ D++ G+ D+ + +L C ++ G N G++P +
Sbjct: 369 QAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHY 428
Query: 69 VGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE------ 122
G++ G G + E + +S+ D L LG ++G L+ A +
Sbjct: 429 GGLVDILGRAGRIAEAEELIKSMPMAPD-QFVLGGLLGACRIHGNLEAAERAAKQLLEID 487
Query: 123 ------FIRNMQIDASSVVWE--------TLEKYAQTEPGLLLGE----------PSSSL 158
++ I SS WE E+ + PG E SS
Sbjct: 488 PYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSH 547
Query: 159 RLSN-----------KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPP 207
R S+ K K+AGY+P VL D+ +E KE + SE+LA+A+GL+ST
Sbjct: 548 RQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLLSTSV 607
Query: 208 GRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
G +R+ KNLRIC +CH+ K +S + NREIIVRD+
Sbjct: 608 GTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDR 643
>gi|357156964|ref|XP_003577636.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Brachypodium distachyon]
Length = 710
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
E+ A EV D L+ G+ S I N + L+ + +GV+PN T V+
Sbjct: 505 EIAYAREVFDSLREPGVVSWSAMISAYANHGEHQEALKLFSLMKGEGVKPNSFTVTAVLV 564
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
ACG G VDEG +HF S+ +Y ++PTLEH+ ++D+ GR ++ EA E IR M +
Sbjct: 565 ACGHSGLVDEGLKHFNSIAMEYQMSPTLEHYACMLDMLGRAGRLVEAYEIIRGMSVQPDK 624
Query: 134 VVW 136
VW
Sbjct: 625 CVW 627
>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
Length = 679
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 53/84 (63%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + K AGY P +V D++ KE SERLA+A+G+IST PG LRI KNLR
Sbjct: 578 RLDKEMKSAGYDPDMAHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSPGTPLRIMKNLR 637
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K S I REIIVRD
Sbjct: 638 VCGDCHTMTKLTSKITRREIIVRD 661
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 112/261 (42%), Gaps = 77/261 (29%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDL-------- 110
+GV+P+ T+ ++ C G++++G+++F + + + PT +HF +VDL
Sbjct: 539 EGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLF 598
Query: 111 ---------------------------YGRLQKIAEARE------------FIRNMQIDA 131
+G+L+ A E +I I A
Sbjct: 599 DAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYA 658
Query: 132 SSVVWETL--------EKYAQTEPGLLLGEPSSSL---------------------RLSN 162
+ +WE + E+ + PGL E L RL
Sbjct: 659 AHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHG 718
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIST-PPGRTLRIKKNLRICG 221
+ AGY+P T+ VL D+ + KE Y SE++A+A+GL+S+ G +R+ KNLR+C
Sbjct: 719 LMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCS 778
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH K ++ I R+II+RD
Sbjct: 779 DCHTATKFIARIAGRDIILRD 799
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 22/132 (16%)
Query: 18 ALEVMDKLKN---------IGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTF 68
A EV DK+K IG ++ + D E L E ++ + +G + +TF
Sbjct: 261 AREVFDKMKKRDMVSWNVMIGCYVQNGDFHEAL---------ELYQKLDMEGFKRTKATF 311
Query: 69 VGVITACGCFGAVDEG-FQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNM 127
V ++ AC A+ +G H + R D + +V++Y + + EAR+ M
Sbjct: 312 VSILGACSSVKALAQGRLVHSHILERGLDSEVAVA--TALVNMYAKCGSLEEARKVFNAM 369
Query: 128 QIDASSVVWETL 139
+ + +V W TL
Sbjct: 370 K-NRDAVAWSTL 380
>gi|224118652|ref|XP_002331415.1| predicted protein [Populus trichocarpa]
gi|222873629|gb|EEF10760.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 15/161 (9%)
Query: 97 INP-TLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVV---WETLEKYAQTEPGLLLG 152
+NP + +++ + +LY + K EA R++ ID V W +E + G
Sbjct: 284 MNPGSHANYVLMANLYTSMGKWKEA-AVTRSLMIDRGLVKAPGWSQVEINGSVHV-FIAG 341
Query: 153 EPSSSLRLSNKKK---------DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLI 203
+ S + + KK +AGY+P T+ V+ DL++E KE+ SERLA+A+GLI
Sbjct: 342 DRSHTQSIDIYKKLEEINLKLAEAGYVPETDTVIHDLEREEKEEALKVHSERLAIAFGLI 401
Query: 204 STPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
ST G TLRI KN R C +CH+ +K +S I R +IVRD +
Sbjct: 402 STEAGSTLRIMKNHRTCVDCHSALKFISKITGRHLIVRDGS 442
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 12/175 (6%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K E ++P+ F ++ AC G V++G + F+S+ +D+ I P++EH++ +VDL GR
Sbjct: 176 KMLEIKEIKPDAVVFTSILLACSHVGLVEDGLKFFKSMQKDFGIVPSVEHYMCLVDLLGR 235
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS-SLRLSNKKKDAGYMPY 172
+ A + IR M + + VW L LGE ++ L N A Y+
Sbjct: 236 AGQFELALKTIRVMPVKLQAQVWAPFLSACTKHCNLELGELAARKLLYMNPGSHANYV-- 293
Query: 173 TEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
++ +L + + + L + GL+ P + I G H FI
Sbjct: 294 ---LMANLYTSMGKWKEAAVTRSLMIDRGLVKAPGWSQVEIN------GSVHVFI 339
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+S K + GY+P +YVL +D + KE Y SE+LA+A+ LI P G T+RI KN+RI
Sbjct: 524 ISKKIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRI 583
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ K +S + REI+VRD
Sbjct: 584 CGDCHSAFKYISKVFGREIVVRD 606
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA FE GV N TF+ ++TAC G V EG ++FE + ++YD+ P ++H++ +
Sbjct: 337 EAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFE-MMKEYDLEPEIDHYVTV 395
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
V L GR + A FI M ++ ++ VW L
Sbjct: 396 VALLGRAGLLNYALVFIFKMPMEPTAAVWGAL 427
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
Query: 113 RLQKIAEAREFIRNMQIDAS-SVVW-ETLEKYAQTEPGLLLGEPSSSL------RLSNKK 164
R + +AE R+ +R + S W E K G P + +L
Sbjct: 548 RWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASL 607
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
++AGY P +V+ D+D+E K + SE++AVAYGL+ P G+ +R+ KNLR+CG+CH
Sbjct: 608 REAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCH 667
Query: 225 NFIKKLSSIENREIIVRD 242
+ IK ++ + REII+RD
Sbjct: 668 SAIKLIAQVTGREIILRD 685
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K LE + G P+ TF+GV++ACG G V EG + FES+ Y ++ EH+ +
Sbjct: 414 KALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACM 473
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VDL GR K+ EA I NM ++A ++VW L +T L L E ++ L + A
Sbjct: 474 VDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSA 533
Query: 168 GYMPY 172
G PY
Sbjct: 534 G--PY 536
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%)
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
++D GY P T+ +L DL+ E KE SE+LA+A+GLI+T PG T+R+ KNLRIC +C
Sbjct: 499 RQDEGYEPATKDLLLDLENEEKETAMAQHSEKLAIAFGLINTKPGTTIRVIKNLRICRDC 558
Query: 224 HNFIKKLSSIENREIIVRDKT 244
H K +S I +REII+RD+
Sbjct: 559 HTVAKLVSQIYSREIIMRDRV 579
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 61/103 (59%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE R +G+RPN TF V+ AC G V+EG + F+S+ Y++NP++EH+ +VD
Sbjct: 308 LEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSIEHYGCMVD 367
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLG 152
L GR ++ EA+E I+ M + S+V+W L K LLG
Sbjct: 368 LLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFLLG 410
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 79/141 (56%), Gaps = 13/141 (9%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL---------RLS 161
G ++A+ R+ +++ + ++ W ++ T ++G+ S + L
Sbjct: 727 GMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHT---FIVGDKSHPMTRDIYGKLAELG 783
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+ AGY+P E L D+D+ KE ++ SERLAVA+ LISTP G +R+KKNLRIC
Sbjct: 784 DLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICR 843
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH K +S I +REII+RD
Sbjct: 844 DCHVAFKYISKIVSREIIIRD 864
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ L+ R ++GV PN T V++AC G VD+ ++FES+ + I+ T EH+ +
Sbjct: 594 RALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACM 653
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+D+ GR K+ +A E + NM A++ VW L
Sbjct: 654 IDILGRAGKLEDAMELVNNMPFQANAAVWGAL 685
>gi|302143463|emb|CBI22024.3| unnamed protein product [Vitis vinifera]
Length = 119
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 153 EPSSSLR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
E +S LR L+++ K GY+P + VL D+D E KE + SE+LA+A+ L+ TP G +
Sbjct: 11 EIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPI 70
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
R+ KNLR+C +CH IK +S I NREIIVRD +
Sbjct: 71 RVIKNLRVCSDCHVAIKYISEISNREIIVRDSS 103
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 122/277 (44%), Gaps = 55/277 (19%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
AL++ ++ I D I +L C +++ GK+F G+ PN + + ++
Sbjct: 437 ALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMV 496
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINP---TLEHFLGIVDLYGRLQKIAEARE------- 122
G G + E + V ++ + P LG ++ R +++AE
Sbjct: 497 DLLGRAGHLKEAHE----VIKNMPVKPNSIVWGSLLGACRVH-RDEEMAEMAAQQILELE 551
Query: 123 ------FIRNMQIDASSVVWETL--------EKYAQTEPGLLLGEPSSSLR--------- 159
++ I A+ WE L ++ + PG L E + S+
Sbjct: 552 PENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVH 611
Query: 160 ------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPP 207
+S K AGY P T V D+ +E KE SE+LA+A+GLIS+ P
Sbjct: 612 PQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGP 671
Query: 208 GRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
G T+RI KNLR+C +CH K +S + NRE+IVRD+T
Sbjct: 672 GVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRT 708
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 116/220 (52%), Gaps = 20/220 (9%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
++++L C +LK EA K E+ V+PN ++ +++AC VD G + + + D
Sbjct: 470 MVDILGRCGELK--EAEKLIESMVVKPNEMVWLALLSACRMHSDVDRG-EKAAAAIFNLD 526
Query: 97 INPTLEHFLGIVDLY---GRLQKIAEAREFIRN---MQIDASSVVWETL-----EKYAQT 145
+ + L + ++Y GR +++ R ++ M+ SS W + E ++
Sbjct: 527 SKSSAAYVL-LSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSS--WVVIRGKKHEFFSGD 583
Query: 146 EPGLL-LGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIS 204
P L + E LR K K+ GY+P L D++ E KE+ Y SERLA+A+GLI+
Sbjct: 584 RPHCLRIFEKLEFLR--EKLKELGYVPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLIN 641
Query: 205 TPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
T G T+ + KNLR+C +CH IK +S + +I++RD T
Sbjct: 642 TVEGSTVTVMKNLRVCEDCHTVIKLISRVVGCKIVLRDPT 681
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD-INPTLEHFLGIVDLYGRLQKIAEAR 121
P+ TF G+++AC G + +G + F ++ + I+ ++H+ +VD+ GR ++ EA
Sbjct: 425 PDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAE 484
Query: 122 EFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS-NKKKDAGYM 170
+ I +M + + +VW L + + GE +++ + + K A Y+
Sbjct: 485 KLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYV 534
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS K K+ GY+P VL D+D+E KEK SE+LA+A+GLI+TP G T+R+ KNLRI
Sbjct: 566 LSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRI 625
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
C +CH+F K +S + R +I+RDK
Sbjct: 626 CVDCHSFAKFVSRLYARTVILRDK 649
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 15/151 (9%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD-INPTLEHFLGIVDLYGRLQ 115
E + V+P+ T++ V++ C D G + F ++ D I P + H+ +VDL GR
Sbjct: 386 EENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAG 445
Query: 116 KIAEAREFIRNMQIDASSVVWETL----EKYAQTEPGLLLG------EPSSS---LRLSN 162
++ EA +FI+ M ++ +W +L ++ E G+++G EP ++ + LSN
Sbjct: 446 RVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSN 505
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
AG + RDL QE + RS
Sbjct: 506 LYASAGKWEDMRNI-RDLMQEKAVTKEPGRS 535
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 160 LSNKKKDAGYMPYTEYVLR-DLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
L + K GY+P T V D+++E KE Y SE+LA+A+GL++TPPG T+R+ KNLR
Sbjct: 503 LMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLR 562
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
ICG+CHN K +S I R+I++RD
Sbjct: 563 ICGDCHNAAKLISFIFGRKIVIRD 586
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 59/100 (59%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
LK + + + +GVRP+ TF+G++ AC G V++G +F S+++ Y I P ++H+
Sbjct: 314 LKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGC 373
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTE 146
+VDL GR + EA F+ ++I A+ ++W TL T
Sbjct: 374 MVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTH 413
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 57/85 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L ++ K GY+P VL D+D E KE+ Y SE+LA+A+GLI TP G T+ I KNLRI
Sbjct: 582 LIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLALAFGLIHTPKGATIHIMKNLRI 641
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
C +CH IK +S + +R+I+VRD
Sbjct: 642 CDDCHVAIKLISVVTSRKIVVRDAV 666
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
+EA + V P++ TFVGV++AC G VDE F + ++ ++ I P EH+ +V
Sbjct: 396 MEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVG 455
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
L R+ ++ EA FI N I V W +L Q LG + L + D G
Sbjct: 456 LLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVG 514
>gi|218200987|gb|EEC83414.1| hypothetical protein OsI_28874 [Oryza sativa Indica Group]
Length = 434
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V PN+ TFVGV++AC G V EG HF S+ +YDI P +EH+ +V+L+GR K+ A
Sbjct: 82 VEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAA 141
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYT 173
+EFI M I ++ VW +L +G ++ + L D+G PY
Sbjct: 142 KEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSG--PYV 192
>gi|50726624|dbj|BAD34344.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 607
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 102/235 (43%), Gaps = 46/235 (19%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEG-FQHFESVTRDYDINPTLEHFLG 106
K LE R E G+ PN TF V+ AC G V+EG F E + + + P +
Sbjct: 296 KALELFARMEITGLVPNKITFNTVLNACSHGGFVEEGLFDKAEKMIQMMPMKPDAAVWKA 355
Query: 107 IVDLYGRLQKIAEARE----FIRNMQIDASSVV-----------WE--------TLEKYA 143
+V + R+ I D + V W L++
Sbjct: 356 LVGACKTHRNFELGRKAGHMLIEAAPNDHAGYVLLSNIYALDGNWTGVHKVRKLMLDRGV 415
Query: 144 QTEPG------------LLLGEPSSSLR---------LSNKKKDAGYMPYTEYVLRDLDQ 182
Q PG + G+ S S + + + K AGY+P T +VL D+D
Sbjct: 416 QKVPGSSSIEIDGVIHEFISGDKSHSSKEDIYEMLSEMCQQLKVAGYVPDTSHVLLDIDD 475
Query: 183 E-AKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENR 236
E KE SE+LA+A+GLIST PG +RI KNLR+CG+CHN +K LS I R
Sbjct: 476 EDVKESSLALHSEKLAIAFGLISTAPGTPIRIAKNLRVCGDCHNAVKLLSKIYGR 530
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 54/76 (71%)
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AGY+P E L D+D+ KE ++ SERLAVA+ LISTP G +R+KKNLRIC +CH
Sbjct: 784 AGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAA 843
Query: 227 IKKLSSIENREIIVRD 242
K +S I +REII+RD
Sbjct: 844 FKFISDIVSREIIIRD 859
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ L+ R ++ + PN T V+ AC G VDE ++F S+ + I T EH+ +
Sbjct: 589 RALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACM 648
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+DL GR K+ +A E + +M ++ VW L
Sbjct: 649 IDLLGRAGKLDDAMELVNSMPFQTNAAVWGAL 680
>gi|297733972|emb|CBI15219.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K AGY+ L +L E K +Y SE+LA+A+G+++TPPG T+R+ KNLRIC +CH
Sbjct: 402 KIAGYVAELSSELHNLGAEEKGNRLSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCH 461
Query: 225 NFIKKLSSIENREIIVRDKT 244
NF K LS NRE+++RD+T
Sbjct: 462 NFAKVLSGAYNREVVIRDRT 481
>gi|242076142|ref|XP_002448007.1| hypothetical protein SORBIDRAFT_06g019570 [Sorghum bicolor]
gi|241939190|gb|EES12335.1| hypothetical protein SORBIDRAFT_06g019570 [Sorghum bicolor]
Length = 458
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
+K+ GY+ T +VL D+ +E K SERLA+A+GLIST PG +RI KNLR+CG+C
Sbjct: 362 RKEGGYVEDTRFVLHDVSEEEKIDMLHKHSERLAIAFGLISTRPGMPIRIAKNLRVCGDC 421
Query: 224 HNFIKKLSSIENREIIVRD 242
H F K +S + REI+VRD
Sbjct: 422 HEFTKLVSKLFGREIVVRD 440
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 104/218 (47%), Gaps = 44/218 (20%)
Query: 51 EAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLE--HFLGIV 108
+A K E + PN + ++ AC VD G + + + I+P E H L +
Sbjct: 499 KAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQ---IDPQDEATHVL-LS 554
Query: 109 DLYGRLQK---IAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLR------ 159
++Y R ++ +A R+F++N K + EPGL E +
Sbjct: 555 NIYARTRRWNSVASVRKFMKN--------------KGVKKEPGLSWIENQGIVHYFSVGD 600
Query: 160 ---------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIS 204
L+ K + AGY+P VLRD++ + K++ SERLA+A+GLI
Sbjct: 601 TSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIR 660
Query: 205 TPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
TP +RI KNLRIC +CH+ IK +S I R+II+RD
Sbjct: 661 TPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRD 698
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+A + + PN TFV +++AC G +D G +F+S+ +DY I P +EH+ +V
Sbjct: 430 LKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVW 489
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
L GR + +A + I + ++ + VW L
Sbjct: 490 LLGRSGHLDKAVKLIEEIPLEPNVKVWRAL 519
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 57/83 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K+ GY V++D++QE ++ Y SE+LA+AYG+IST PG +R+ KNLR+
Sbjct: 908 LIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRV 967
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CHNFIK S + REII+RD
Sbjct: 968 CIDCHNFIKYASELLGREIIIRD 990
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA + FE N+G+ PN +FVGV+TAC G ++EG ++F + Y I P EHF +
Sbjct: 720 EAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCM 779
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA 167
VDLYGR ++ E +EFI N I S VW + + + +G L + DA
Sbjct: 780 VDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDA 839
Query: 168 G-YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
G Y+ ++ + E K ++ +R G+ P +++K + H+F
Sbjct: 840 GPYILFSSICATEHRWEEAAKIRSLMQQR-----GVKKNPSQSWIQLKN------QVHSF 888
Query: 227 I 227
+
Sbjct: 889 V 889
>gi|125561646|gb|EAZ07094.1| hypothetical protein OsI_29343 [Oryza sativa Indica Group]
Length = 378
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 92/198 (46%), Gaps = 46/198 (23%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
LKL +A + EN G P+ T + ++ AC GA+D G + +E ++H G
Sbjct: 211 LKLFDAMRGGEN-GAEPDDVTCILLLQACTSLGALDFGEKVWEY---------AVDHGYG 260
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD 166
+ R +I E L E + LR+
Sbjct: 261 ADASHPRKAEIYEK------------------------------LDEINKHLRI------ 284
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AGY+P L DLD E KE Y SE+LA+A+ L+ TP R +R+ KNLR+C +CHNF
Sbjct: 285 AGYVPNVSSELHDLDSEGKECALAYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNF 344
Query: 227 IKKLSSIENREIIVRDKT 244
K S + +R +IVRD+T
Sbjct: 345 TKVFSGVYHRLVIVRDRT 362
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 118/279 (42%), Gaps = 59/279 (21%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
AL++ DK++ G D + +L C +++ G + + G+ P + I
Sbjct: 603 ALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAI 662
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTL-------------------EHFLG------- 106
G +D+ ++ +D + PT EH L
Sbjct: 663 DLLARSGRLDKAWR----TVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNA 718
Query: 107 --------IVDLY---GRLQKIAEAREFIRNMQIDA-SSVVWETLEKYAQTEPGLLLGEP 154
I ++Y GR + +A R ++ I W +K + +G+
Sbjct: 719 ENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTAS---FFVGDR 775
Query: 155 SSSLR---------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIST 205
S L L ++ K GY+P T + L D+D+E K SE+LA+AYGL++T
Sbjct: 776 SHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTT 835
Query: 206 PPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
PG +RI KNLR+CG+CH+ +S I + EI+VRD +
Sbjct: 836 SPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 874
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS K K+ GY+P VL D+D+E KEK SE+LA+A+GLI+TP G T+R+ KNLRI
Sbjct: 538 LSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRI 597
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
C +CH+F K +S + R +I+RDK
Sbjct: 598 CVDCHSFAKFVSRLYARTVILRDK 621
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 15/151 (9%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD-INPTLEHFLGIVDLYGRLQ 115
E + V+P+ T++ V++ C D G + F ++ D I P + H+ +VDL GR
Sbjct: 358 EENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAG 417
Query: 116 KIAEAREFIRNMQIDASSVVWETL----EKYAQTEPGLLLG------EPSSS---LRLSN 162
++ EA +FI+ M ++ +W +L ++ E G+++G EP ++ + LSN
Sbjct: 418 RVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSN 477
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
AG + RDL QE + RS
Sbjct: 478 LYASAGKWEDMRNI-RDLMQEKAVTKEPGRS 507
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 26/161 (16%)
Query: 102 EHFLGIVDLYGRLQ---KIAEAREF-----IRNM----QIDASSVVWE-TLEKYAQTEPG 148
E+++ + +LY R Q K+ E RE +R + I+ +VV+E + Y +PG
Sbjct: 447 ENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIEIDNVVYEFVVSNY--IKPG 504
Query: 149 L-----LLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLI 203
LL + + L+L+ D G Y D+++E KE Y SE+LA+A+GL+
Sbjct: 505 FEEVYKLLADMNKKLKLAGYVADTGMASY------DIEEEEKEHSLMYHSEKLALAFGLL 558
Query: 204 STPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
+P G TLRI KNLRIC +CH F K +S + R+I VRD+
Sbjct: 559 KSPSGLTLRIVKNLRICQDCHGFFKIVSKVYRRDISVRDRN 599
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 57/104 (54%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+A R + +P+ TF+GV+ AC G V+EG +F S+ ++ + P +EH+ +VD
Sbjct: 329 LQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVD 388
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
L GR + EA++ I+ M + ++W L + + LGE
Sbjct: 389 LLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGE 432
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 55/84 (65%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL +K K+ GY P T Y L + D KE SE+LA+A+G+++ PP RT+R+ KNLR
Sbjct: 470 RLRSKMKEEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLR 529
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S REI++RD
Sbjct: 530 VCGDCHEMAKFISKTLGREIVLRD 553
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ P+ +F+ ++ AC G +DEG++ F + + ++ P LEH+ IVDL R K+A
Sbjct: 295 GIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAM 354
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRD 179
A +FI++M I+ + +W L + + L E + + ++ GY YVL
Sbjct: 355 AYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGY-----YVLLA 409
Query: 180 LDQEAKEKPQTYRSERLAVA-YGLISTPPGRTLRIKKNLRI 219
EK + + R + GL P + +K + I
Sbjct: 410 NTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHI 450
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 165 KDAGYMPYTEYVLR-DLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
K GY+P T V+ D++ E KE Y SE+LA+++GL++TPPG T+R+ KNLR+CG+C
Sbjct: 505 KSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGDC 564
Query: 224 HNFIKKLSSIENREIIVRD 242
H+ K +SS+ +REII+RD
Sbjct: 565 HSAAKLISSLIDREIILRD 583
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+P+ TF+G++ AC G VDEGF++F S++ Y I P ++H+ +VDL GR + EA
Sbjct: 325 VQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEA 384
Query: 121 REFIRNMQIDASSVVWETL 139
+FI + I + ++W TL
Sbjct: 385 YKFIDELPIKPTPILWRTL 403
>gi|358357156|gb|AEU08418.1| pentatricopeptide repeat protein [Atrichum undulatum]
Length = 152
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 55/84 (65%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS K GY+P T VLR++D+ KE SERLA+AYGL+ TPPG+ +R+ KNLR
Sbjct: 58 RLSETIKAEGYIPDTRLVLRNIDEAEKELALCSHSERLAIAYGLMRTPPGQPIRVFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S REI VRD
Sbjct: 118 VCSDCHTATKFISKAVEREIAVRD 141
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 79/139 (56%), Gaps = 8/139 (5%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQT-EPGLLLGEP--SSSLRLSNKKK-- 165
GR + ++ R+FI + ++ S W +K G +L P ++ LR+ K
Sbjct: 550 GRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGL 609
Query: 166 --DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
++GY +VL D+D+E K Y SER AVAYGL+ P G +R+ KNLR+CG+C
Sbjct: 610 LMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDC 669
Query: 224 HNFIKKLSSIENREIIVRD 242
H+ IK ++ I +REII+RD
Sbjct: 670 HSAIKLIAKITSREIILRD 688
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ P+ T++G +TAC G V EG + F S+T + I P EH+ +VDL GR + E
Sbjct: 429 GMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEE 488
Query: 120 AREFIRNMQIDASSVVWETL 139
A + I+NM ++ +V+W L
Sbjct: 489 AFDLIKNMPVEPDAVIWGAL 508
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 118/279 (42%), Gaps = 59/279 (21%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
AL++ DK++ G D + +L C +++ G + + G+ P + I
Sbjct: 610 ALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAI 669
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTL-------------------EHFLG------- 106
G +D+ ++ +D + PT EH L
Sbjct: 670 DLLARSGRLDKAWR----TVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNA 725
Query: 107 --------IVDLY---GRLQKIAEAREFIRNMQIDA-SSVVWETLEKYAQTEPGLLLGEP 154
I ++Y GR + +A R ++ I W +K + +G+
Sbjct: 726 ENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTAS---FFVGDR 782
Query: 155 SSSLR---------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIST 205
S L L ++ K GY+P T + L D+D+E K SE+LA+AYGL++T
Sbjct: 783 SHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTT 842
Query: 206 PPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
PG +RI KNLR+CG+CH+ +S I + EI+VRD +
Sbjct: 843 SPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 881
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 58/78 (74%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K+ GY+P T +VL+D+D++ KE SE++A+A+GLIST G LRI KNLR+CG+CH
Sbjct: 877 KEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCH 936
Query: 225 NFIKKLSSIENREIIVRD 242
+ K +S +E R+II+RD
Sbjct: 937 SATKFISKVEKRDIIMRD 954
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
++F G++PN TF +++AC G ++EG+++F+ + +Y ++P +E + +VDL R
Sbjct: 690 QQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSR 749
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
+ E EFI M + ++ VW +L
Sbjct: 750 AGQFNETLEFIEKMPFEPNAAVWGSL 775
>gi|190612965|gb|ACE80860.1| pentatricopeptide repeat protein [Metzgeria furcata]
Length = 152
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 55/84 (65%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS K GY+P + L D+++E + + SE+LA+A+GLISTP G +RI KNLR
Sbjct: 58 RLSEHMKSTGYVPDLTFALHDVEEEKRAVHLCHHSEKLAIAFGLISTPAGTPIRIVKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K +S I REI VRD
Sbjct: 118 VCGDCHTATKFISKIVGREITVRD 141
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 76/265 (28%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEG----------------FQHF---------- 88
R + GV P+ ++GV++AC G V+EG +H+
Sbjct: 348 RMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRA 407
Query: 89 ------ESVTRDYDINP---TLEHFLGIVDLYG------RLQKI------AEAREFIRNM 127
E + + + P L+ LG ++G R+ KI ++ ++
Sbjct: 408 GCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALS 467
Query: 128 QIDASSVVWETLEKY--------AQTEPGL-----------LLGEPSSSLR--------- 159
+ AS WE + K + +PG L E S R
Sbjct: 468 NMFASEGNWEGVVKVRLKMKELDIRKDPGCSWIELDGVIHEFLVEDDSHPRAEGIHSMLE 527
Query: 160 -LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+S++ + GY P T VL ++D++ K+ Y SE++A+A+GLIST P L+I KNLR
Sbjct: 528 EMSDRLRSVGYRPNTTQVLLNMDEKEKQSALHYHSEKIAIAFGLISTRPQTPLQIVKNLR 587
Query: 219 ICGECHNFIKKLSSIENREIIVRDK 243
+C +CH+ IK +S I NR+IIVRD+
Sbjct: 588 VCEDCHSSIKLVSKIYNRKIIVRDR 612
>gi|358357180|gb|AEU08430.1| pentatricopeptide repeat protein [Lejeunea cavifolia]
Length = 152
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 56/85 (65%)
Query: 158 LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
+RL+ + K AGY+P T + LRD ++ K Y SE+LA+A+GLISTP G L I KNL
Sbjct: 57 VRLAEQMKQAGYIPDTRFALRDEEEGKKIDHLCYHSEKLAIAFGLISTPAGAPLHIVKNL 116
Query: 218 RICGECHNFIKKLSSIENREIIVRD 242
R CG+CH K ++ + REI VRD
Sbjct: 117 RACGDCHTATKFIAKLVGREITVRD 141
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 56/78 (71%)
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AG+ P T VL D+D+E KE Y SE+LA+A+GLI+T PG+ + I KNLR+C +CH+
Sbjct: 573 AGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSA 632
Query: 227 IKKLSSIENREIIVRDKT 244
K +S I +REIIVRD+
Sbjct: 633 TKLISQIFDREIIVRDRV 650
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE + + ++PN T VGV+TAC G VD+G + F+++ Y ++P LEH+ +VD
Sbjct: 380 LELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVD 439
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
L GR +EA + I +M + ++ VW L + L E + L + +++G
Sbjct: 440 LLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSG 498
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 56/78 (71%)
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AG+ P T VL D+D+E KE Y SE+LA+A+GLI+T PG+ + I KNLR+C +CH+
Sbjct: 573 AGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSA 632
Query: 227 IKKLSSIENREIIVRDKT 244
K +S I +REIIVRD+
Sbjct: 633 TKLISQIFDREIIVRDRV 650
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE + + ++PN T VGV+TAC G VD+G + F+++ Y ++P LEH+ +VD
Sbjct: 380 LELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVD 439
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
L GR +EA + I +M + ++ VW L + L E + L + +++G
Sbjct: 440 LLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSG 498
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 58/78 (74%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K+ GY+P T +VL+D+D++ KE SE++A+A+GLIST G LRI KNLR+CG+CH
Sbjct: 634 KEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCH 693
Query: 225 NFIKKLSSIENREIIVRD 242
+ K +S +E R+II+RD
Sbjct: 694 SATKFISKVEKRDIIMRD 711
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
++F G++PN TF +++AC G ++EG+++F+ + +Y ++P +E + +VDL R
Sbjct: 447 QQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSR 506
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYT 173
+ E EFI M + ++ VW +L + L E ++ + + +G
Sbjct: 507 AGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSG----- 561
Query: 174 EYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT-LRIKKNLRICGECHNFI 227
YVL A + + R + ++ PPG + + +K+ L H+F+
Sbjct: 562 NYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKL------HSFV 610
>gi|358357170|gb|AEU08425.1| pentatricopeptide repeat protein [Timmia megapolitana subsp.
bavarica]
Length = 152
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + K GY+P T VL+++D+E KE SE+LA+AYGL+ PPG+ +R+ KNLR
Sbjct: 58 RLAERIKAEGYIPDTRLVLQNIDEEDKELALCSHSEKLAIAYGLMHIPPGKLIRVYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S + REI+ RD
Sbjct: 118 VCSDCHTATKFISKVTKREIVARD 141
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 45/271 (16%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
AL++ +++ G+ D ++ +L C +L G+ + N G+ P + ++
Sbjct: 318 ALKLFGRMEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMV 377
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHF-----LGIVDL----------------- 110
G G ++E + + + + D+ F G VDL
Sbjct: 378 DLYGRAGRLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSG 437
Query: 111 -----------YGRLQKIAEAREFI--RNMQIDASSVVWETLEKYAQTEPGLLLGEPSSS 157
GR + +A R + RN+ +A V E + + + G L +
Sbjct: 438 RYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGLCHPRAEE 497
Query: 158 LR-----LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
+ + + + GY+P T VL + +E KE P Y SE+LA+A+GL+ T PG T+R
Sbjct: 498 VYAMARDMMREIRAEGYVPDTRDVLHAIAEEEKETPLLYHSEKLAIAFGLLHTRPGDTMR 557
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRDK 243
I KNLR+C +CH K +S + R+I+VRD+
Sbjct: 558 ITKNLRVCRDCHEATKFVSRVFERQIVVRDR 588
>gi|383157266|gb|AFG60956.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
gi|383157268|gb|AFG60957.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
gi|383157274|gb|AFG60960.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
Length = 149
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 59/83 (71%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K+AGY+P T VL+D+++E KE SE+LA+A+G+I+T PG +RI KNLR+
Sbjct: 49 LYGQMKEAGYVPKTNPVLQDVEEEMKETVLFSHSEKLAIAFGVINTSPGNPIRIVKNLRM 108
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CHN IK +S I R IIVRD
Sbjct: 109 CTDCHNAIKFISKIVGRVIIVRD 131
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 57/84 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K K AGY P T+YVL+D+DQE K + SE+LAVA+G+++ ++R+ KNLRI
Sbjct: 641 LGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRI 700
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
CG+CHN IK +S + IIVRD
Sbjct: 701 CGDCHNAIKYVSKVVGVTIIVRDS 724
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
G++PN TF GV++ C V+EG Q F S+ RD+ + P H+ +VD++ R ++
Sbjct: 464 SGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLH 523
Query: 119 EAREFIRNMQIDASSVVWETL 139
EA EFI+ M ++ ++ W L
Sbjct: 524 EAYEFIQRMPMEPTASAWGAL 544
>gi|190612983|gb|ACE80869.1| pentatricopeptide repeat protein [Thyrsopteris elegans]
Length = 152
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L+ + K GY+P T VL D+++E KE +Y SE+LA+A+GLISTP G L I KNLR
Sbjct: 58 KLNLQMKVEGYVPDTNLVLHDVEEELKEHLLSYHSEKLAIAFGLISTPHGTPLHIVKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S I REII+RD
Sbjct: 118 LCSDCHTAAKFISKITEREIIMRD 141
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+S + + AGY+P T+YVL +D++ ++ Y SE++A+A+ LI+ P G T+RI KN+RI
Sbjct: 413 ISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRI 472
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ + +S + REI+VRD
Sbjct: 473 CGDCHSAFRYISKVFEREIVVRD 495
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV N TF+ ++TAC G V EG Q+F+ + +++++ P ++H++ +VDL GR + +
Sbjct: 238 GVHLNQITFLSILTACSHGGLVKEGKQYFD-MMKEHNLEPEIDHYVTVVDLLGRAGLLND 296
Query: 120 AREFIRNMQIDASSVVWETL 139
A FI M + ++ VW L
Sbjct: 297 ALVFIFKMPMKPTAAVWGAL 316
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 51/273 (18%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
A+ + +++++G+ DS + +L+ C LL+ G+ + E + P FV ++
Sbjct: 1380 AVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMV 1439
Query: 73 TACGCFGAVDEGFQHFESVTRD-----------------------------YDINPTLE- 102
G G VDE + + + + + + P
Sbjct: 1440 DLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSG 1499
Query: 103 HFLGIVDLY---GRLQKIAEAREFIRNMQIDASSVVWE-TLEKYAQTEPGLLLGEPSSSL 158
+++ + ++Y GR + + R ++ I V L+ T L G+ S
Sbjct: 1500 YYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHT---FLAGDQSHPQ 1556
Query: 159 R---------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
L K K+AGY+P T+ L D+++E KE SE+LA+A+ +++T PG
Sbjct: 1557 SKQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGS 1616
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KNLR+CG+CH K +S I REI +RD
Sbjct: 1617 PIRITKNLRVCGDCHIAAKLISKIVGREITIRD 1649
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 13/141 (9%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL---------RLS 161
G ++A+ R+ +++ ++ ++ W L+ T ++G+ S L
Sbjct: 724 GMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHT---FIVGDKSHPRARDIYAKLEELG 780
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+ AGY+P E L D+D+ KE ++ SERLAVA+ LISTP G +R+KKNLRIC
Sbjct: 781 DLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICR 840
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH K +S I +REII+RD
Sbjct: 841 DCHVAFKFISKIVSREIIIRD 861
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ L+ +R ++ + PN T V+ AC G VDE +F S+ + I+ T EH+ +
Sbjct: 591 RALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCM 650
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+DL GR K+ +A E + +M +A++ VW L
Sbjct: 651 IDLLGRAGKLDDAMELVNSMPFEANAAVWGAL 682
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 70/104 (67%), Gaps = 7/104 (6%)
Query: 140 EKYAQ-TEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAV 198
E +A+ T GL+L E + RLS +AGY+P T VL D+D++ KE + SE+LA+
Sbjct: 721 ESHAENTHIGLMLEEINC--RLS----EAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAM 774
Query: 199 AYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
AYGLI+T G +R+ KNLR+C +CH+F K +S + NREI VRD
Sbjct: 775 AYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRD 818
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+P+ FV ++TAC G+VD+G Q F S+ + + I P + H+ +VDL GR + EA
Sbjct: 561 VKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEA 620
Query: 121 REFIRNMQIDASSVVWETL 139
+ I++M I+ + VVW +L
Sbjct: 621 VDLIQSMPIEPNDVVWGSL 639
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVR 62
NS + L R+ +++ A + D++ + + I L+ V M + +E + +N G+
Sbjct: 402 NSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIP 461
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
+ T VG+ +ACG GA+D + ++ DI+ L+ +VD++ R + A
Sbjct: 462 GDRVTMVGIASACGYLGALDLAKWVCTYIEKN-DIHVDLQLGTALVDMFSRCGDPSSAMH 520
Query: 123 FIRNMQ 128
+ M+
Sbjct: 521 VFKRME 526
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K+ GY+ T++VL + +E K + SERLA+AYG+++TP G +LRI KNLR+CG+CH
Sbjct: 862 KEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCH 921
Query: 225 NFIKKLSSIENREIIVRD 242
NF K +S RE+++RD
Sbjct: 922 NFCKLISKFFERELVMRD 939
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 22 MDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK-------RFENDGVRPNWSTFVGVITA 74
++K +N+ F+ + D++ ++ + G+ R E++ + P+ FV V+ A
Sbjct: 635 LEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYA 694
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G ++EG + ES+ +Y + P EH+ +VDL GR + EA +F++ M+++ ++
Sbjct: 695 CSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAE 754
Query: 135 VWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
VW L Q LGE ++ L ++ G
Sbjct: 755 VWCALLGACQIHSNKELGEIAAQKLLEMDPENPG 788
>gi|190612823|gb|ACE80789.1| pentatricopeptide repeat protein [Asplenium nidus]
Length = 152
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L+ + K GY+P T VL D+++E KE+ Y SE+LA+A+GLISTP G L + KNLR
Sbjct: 58 KLNLEMKAEGYVPETNLVLHDVEEEMKERLLCYHSEKLAMAFGLISTPQGTPLHVVKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
IC +CH K +S I REI++RD
Sbjct: 118 ICADCHTAAKYISKIRAREIVMRD 141
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 73/134 (54%), Gaps = 17/134 (12%)
Query: 111 YGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYM 170
Y + + +F+ N Q S W TLE A E ++ + K GY
Sbjct: 610 YSSITVAGQVHKFVANDQ----SHPW-TLEIMAMME------------EIACRLKSVGYS 652
Query: 171 PYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKL 230
P T + D+D+E KE+ SE++A+A+GLIS PP + I KNLR+C +CH+ IK +
Sbjct: 653 PVTSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPSLPIHIVKNLRVCEDCHSAIKLV 712
Query: 231 SSIENREIIVRDKT 244
S + NREIIVRD++
Sbjct: 713 SQLWNREIIVRDRS 726
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 51/90 (56%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE+ + + DG +P T++ V+TAC +DEG HF + + ++P +EH+ ++D
Sbjct: 456 LESFCQMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMID 515
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
L R + EA ++ M + ++V+W ++
Sbjct: 516 LLARSGLLDEAMHLVQTMPMQPNAVIWGSI 545
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K+ GY+ T++VL + +E K + SERLA+AYG+++TP G +LRI KNLR+CG+CH
Sbjct: 898 KEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCH 957
Query: 225 NFIKKLSSIENREIIVRD 242
NF K +S RE+++RD
Sbjct: 958 NFCKLISKFFERELVMRD 975
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 7/154 (4%)
Query: 22 MDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK-------RFENDGVRPNWSTFVGVITA 74
++K +N+ F+ + D++ ++ + G+ R E++ + P+ FV V+ A
Sbjct: 671 LEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYA 730
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G ++EG + ES+ +Y + P EH++ +VDL GR + EA +F++ M+++ ++
Sbjct: 731 CSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAE 790
Query: 135 VWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
VW L Q LGE ++ L ++ G
Sbjct: 791 VWCALLGACQIHSNKELGEIAAQKLLEMDPENPG 824
>gi|115468046|ref|NP_001057622.1| Os06g0472300 [Oryza sativa Japonica Group]
gi|113595662|dbj|BAF19536.1| Os06g0472300, partial [Oryza sativa Japonica Group]
Length = 397
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 57/84 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL ++ + GY P TE+VL+DL E KE Y SE+LA+A+G ++ G+ +RI KNLR
Sbjct: 296 RLFSRVTNLGYTPQTEFVLQDLATEQKEDLLKYHSEKLAIAFGTMNAMEGKPIRIMKNLR 355
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
ICG+CH F K +S E + II+RD
Sbjct: 356 ICGDCHAFAKLVSKSEGKVIIIRD 379
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 50 LEAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
+EA K F+ ++G RPN T VGV+ AC G V++G+ +F S+ + + I P EH
Sbjct: 108 IEALKVFDMMKSEGPRPNHITMVGVLFACSHAGLVEDGWYYFSSMEKLFGIQPEREHCNC 167
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+VDL GR K+ +A +FI M SV+W TL
Sbjct: 168 MVDLLGRAGKLDDAVKFIHEMNFQPDSVIWRTL 200
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Query: 10 CREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKL-------LEAGKRFENDGVR 62
C+ E+ A + D++ SPD++ + M L L +R E +
Sbjct: 318 CKCGEISIAHHIFDRMC-------SPDVVSWTAMIMGYALHGPAREALVLFERMELGNAK 370
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN TF+ V+TAC G VD+G+++F+S++ Y I PTLEH + D+ GR ++ EA
Sbjct: 371 PNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYN 430
Query: 123 FIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
FI MQI ++ VW TL + + +L E
Sbjct: 431 FISKMQIKPTASVWSTLLRACRVHKNTMLAE 461
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 59/83 (71%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ K K+ GY+P T +V +DQ+ KE Y SE+LA+A+ L++T PG +RI KN+R+
Sbjct: 568 LNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNIRV 627
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ IK +S + REIIVRD
Sbjct: 628 CGDCHSAIKYVSLVVKREIIVRD 650
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 15/142 (10%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+ PN TF+ V+TAC G +DEG +FE + + Y + P L H+ +VDL+GR + +A
Sbjct: 394 IEPNDITFLSVLTACSHAGLLDEGLYYFE-LMKKYGLEPKLSHYTTVVDLFGRAGLLDQA 452
Query: 121 REFIRNMQIDASSVVWETL----EKYAQTEPGLLLGE---------PSSSLRLSNKKKDA 167
+ FI M I+ ++ +W L + + TE G + P + LSN A
Sbjct: 453 KSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASA 512
Query: 168 GYMPYTEYVLRDL-DQEAKEKP 188
G V +++ D K++P
Sbjct: 513 GQWKDVAKVRKEMKDSGLKKEP 534
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 125/286 (43%), Gaps = 47/286 (16%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----E 57
N+ + R + AL + +K G+ D ++ +L+ C L++ G+++ +
Sbjct: 479 NTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ 538
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+ GV PN + ++ G G +++ +++ + D LG ++G +
Sbjct: 539 DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA-AIWGTLLGASRVHGNTELA 597
Query: 118 AEAREFIRNMQ------------IDASSVVWETL--------EKYAQTEPGLLLGEPSSS 157
A + I M+ + ASS W + +K + PG E +
Sbjct: 598 ETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNK 657
Query: 158 LR---------------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERL 196
L + K AGY+ T VL D+++E KE+ Y SERL
Sbjct: 658 THTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERL 717
Query: 197 AVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
AVAYG++ GR +R+ KNLR+C +CHN IK ++ I R II+RD
Sbjct: 718 AVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRD 763
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+S + + AGY+P T+YVL +D++ ++ Y SE++A+A+ LI+ P G T+RI KN+RI
Sbjct: 537 ISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRI 596
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ + +S + REI+VRD
Sbjct: 597 CGDCHSAFRYISKVFKREIVVRD 619
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV N TF+ ++TAC G V EG Q+F+ + ++Y++ P ++H++ +VDL GR + +
Sbjct: 362 GVHLNQITFLSILTACSHGGLVKEGKQYFD-MMKEYNLEPEIDHYVTVVDLLGRAGLLND 420
Query: 120 AREFIRNMQIDASSVVWETL 139
A FI M + ++ VW L
Sbjct: 421 ALVFIFKMPMKPTAAVWGAL 440
>gi|359496867|ref|XP_003635359.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like, partial [Vitis vinifera]
Length = 115
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 57/84 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ + K GY P T VL+D D++ KE + SE+LA+A+GL+ST PG T+RI KNLR+
Sbjct: 15 ITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRV 74
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
C +CH IK +S R IIVRD+
Sbjct: 75 CDDCHIAIKLISRTYKRRIIVRDR 98
>gi|190612883|gb|ACE80819.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 60/84 (71%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K+AGY+P T +V+ D+++E K + SE+LA+A+GL+ST G LRI KNLR
Sbjct: 58 RLSEQMKEAGYVPDTRFVMHDVEEEDKVFHLCHHSEKLAIAFGLLSTVAGTPLRIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CHN K ++ + REI+VRD
Sbjct: 118 VCIDCHNATKFMTKLLGREIVVRD 141
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 79/139 (56%), Gaps = 8/139 (5%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQT-EPGLLLGEP--SSSLRLSNKKK-- 165
GR + ++ R+FI + ++ S W +K G +L P ++ LR+ K
Sbjct: 550 GRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGL 609
Query: 166 --DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
++GY +VL D+D+E K Y SER AVAYGL+ P G +R+ KNLR+CG+C
Sbjct: 610 LMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDC 669
Query: 224 HNFIKKLSSIENREIIVRD 242
H+ IK ++ I +REI++RD
Sbjct: 670 HSAIKLIAKITSREIVLRD 688
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ P+ T++G +TAC G V EG + F S+T + I P EH+ +VDL GR + E
Sbjct: 429 GMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEE 488
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYT 173
A + I+NM ++ +V+W L + + E ++ L + +AG PY
Sbjct: 489 AFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAG--PYV 540
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K GY P TE V+ D++ E KE + SE+LA+A+ L+ T PG T+R+ KNLR+C +CH
Sbjct: 597 KTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCH 656
Query: 225 NFIKKLSSIENREIIVRD 242
IK +S I +REIIVRD
Sbjct: 657 TAIKLISRITHREIIVRD 674
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHFLGIVDLYGRL 114
+ +GVRP+ G ++AC GA+D G Q V D + NP L ++D+Y +
Sbjct: 311 MQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG--TALIDMYAKC 368
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
AEA + M+ +VW +
Sbjct: 369 GSTAEAWVVFQQMR-KKDIIVWNAM 392
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 104/199 (52%), Gaps = 24/199 (12%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP-TLEHFLGIVDLY---GRLQK 116
++P+ S + +++AC G VD G E + +++ P + + + + ++Y G+ +
Sbjct: 617 LQPDASIWGALLSACRVHGNVDLGKIASEHL---FEVEPEHVGYHVLLSNMYASAGKWEG 673
Query: 117 IAEAREFIR-----------NMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLR-LSNKK 164
+ E R +M++D V+ T QT P + E L L K
Sbjct: 674 VDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGN---QTHP--MYEEMYRELTALHEKL 728
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K GY+P +VL+D++ + KE SERLA+A+ LI+TP T+RI KNLR+CG+CH
Sbjct: 729 KMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCH 788
Query: 225 NFIKKLSSIENREIIVRDK 243
+ K +S I REIIVRD
Sbjct: 789 SVTKFISKITEREIIVRDS 807
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K ++GV+P+ TFV +++AC G VDEG FE + DY I P+L+H+ +VDLYGR
Sbjct: 542 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGR 601
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYT 173
++ A FI++M + + +W L + + LG+ +S + + GY
Sbjct: 602 AGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY---- 657
Query: 174 EYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+L ++ A + + GL TP ++ + + +
Sbjct: 658 HVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEV 703
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 87.4 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 62/195 (31%), Positives = 98/195 (50%), Gaps = 18/195 (9%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTR-DYDINPTLEHFLGIVDLYGRLQKIAE 119
V P+ +T++ ++ AC +G + G E V D I GR A
Sbjct: 598 VPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAA 657
Query: 120 AREFIRNM---------QIDASSVVWETLEK---YAQTEPGLLLGEPSSSLRLSNKKKDA 167
R+ + ++ I+ S V E + + + Q+E + E R+ + A
Sbjct: 658 VRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEA--IYAELE---RVMGAIERA 712
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY T VL D+++E KE+ + SE+LA+A+G++STP G TLR+ KNLR+C +CHN
Sbjct: 713 GYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNAS 772
Query: 228 KKLSSIENREIIVRD 242
K +S + REI+VRD
Sbjct: 773 KFISKVFGREIVVRD 787
Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 68 FVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNM 127
F+ +++AC G V G +HF ++T D+ + P EH+ +VDL GR ++A+A ++ M
Sbjct: 537 FLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAM 596
Query: 128 QIDASSVVWETL----EKYAQTEPGLLLGEPSSSLR 159
+ + W L Y TE G E LR
Sbjct: 597 PVPPDAATWMALMGACRIYGDTERGRFAAERVLELR 632
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL---------RLS 161
G+ +K A R+ + N + W L+ G L+G+ S RL
Sbjct: 482 GKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTH---GFLVGDASHPRSAEIYEELERLE 538
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
DAGYMP T V D+ + K SERLA+A+GLISTP G L + KNLR+C
Sbjct: 539 GLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCE 598
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH IK +S I REII+RD
Sbjct: 599 DCHVVIKLISQIVQREIIIRD 619
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V P+ TFVGV++AC G V E + F + Y I PT++HF +VD+ G + EA
Sbjct: 362 VTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEA 421
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
+ I+ M + S +W L + + LGE + + + +DAG
Sbjct: 422 YDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAG 469
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 15/147 (10%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKL----LEAGKRFEN---DGVRPNWST 67
+K A V D++ D D++ + M + L+A FEN DGVRP +
Sbjct: 379 IKMARYVFDRI-------DKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVA 431
Query: 68 FVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNM 127
F+ V+TAC G VDEG+++F S+ RD+ I P LEH+ + DL GR ++ EA +FI NM
Sbjct: 432 FMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNM 491
Query: 128 Q-IDASSVVWETLEKYAQTEPGLLLGE 153
+ + + VW L + + L E
Sbjct: 492 RGVQPTGSVWSILLAACRAHKSVELAE 518
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+ T VL D+D+E K + SERLA+AYG+IST G T+R+ KN+R+C +CH I
Sbjct: 609 GYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAI 668
Query: 228 KKLSSIENREIIVRDKT 244
K ++ I REI VRD +
Sbjct: 669 KFITKIVGREITVRDNS 685
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K+AGY+P + L D D E KE Y SE+LAVA+GL++ P G +RI KNLR+CG+CH
Sbjct: 419 KEAGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCH 478
Query: 225 NFIKKLSSIENREIIVRD 242
+K S + R II+RD
Sbjct: 479 TAMKYTSKVYARHIILRD 496
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G +P++ TF+G++ AC G + G +FE++ + Y I P EH+ ++DL GR K+AE
Sbjct: 238 GTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAE 297
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRD 179
A+ + M + +VVW+ L + L LGE ++ + ++ MPY +L +
Sbjct: 298 AKGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNS--MPYV--MLSN 353
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTP 206
+ A + R RL + G+ P
Sbjct: 354 MYSAAGKWEDAARIRRLMRSRGICKEP 380
>gi|226507132|ref|NP_001145890.1| uncharacterized protein LOC100279406 [Zea mays]
gi|219884839|gb|ACL52794.1| unknown [Zea mays]
Length = 318
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 105/197 (53%), Gaps = 18/197 (9%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH---FLGIVDLYGRLQKI 117
++PN + ++ AC G ++ G E++TR+ +N H ++ + ++Y ++
Sbjct: 111 MKPNPIIWRTLVAACRAHGRLELG----ETITRNL-LNEYPAHEANYVMLSNVYALTRRW 165
Query: 118 AEAREFIRNM------QIDASSVV---WETLEKYAQTEPGLLLGEPSSSLR-LSNKKKDA 167
E E R M ++ S+V E E A E E + ++ + + A
Sbjct: 166 KEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQWKEIYMMVEEMARELRRA 225
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
G++ T VL DLD+E KE + SE+LA+A+ L+ TPPG +R+ KNLR+C +CH I
Sbjct: 226 GHISATSEVLLDLDEEDKEVALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAI 285
Query: 228 KKLSSIENREIIVRDKT 244
K +S + NREIIVRD++
Sbjct: 286 KCISLVYNREIIVRDRS 302
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GVRP+ F+GV+TAC G VDEG+ +FES+ Y I+P +EH+ +VD++GR +
Sbjct: 42 GVRPDDVAFIGVLTACSHAGMVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGMVER 101
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEP-SSSLRLSNKKKDAGYMPYTEYVLR 178
A EF+ M + + ++W TL + L LGE + +L +A Y+ + +
Sbjct: 102 AMEFVHKMPMKPNPIIWRTLVAACRAHGRLELGETITRNLLNEYPAHEANYVMLSN--VY 159
Query: 179 DLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
L + KEK + R ++ I PG +L + + GE H FI
Sbjct: 160 ALTRRWKEKSEIRRE----MSKRGIKKVPGCSL-----VELDGEVHEFI 199
>gi|125563219|gb|EAZ08599.1| hypothetical protein OsI_30870 [Oryza sativa Indica Group]
Length = 410
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 9/126 (7%)
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGL-LLGEPSSSLR-LSNKKKDAGYMPYTEYV 176
EA + R MQ E +E + T P ++ + L+ L+ + + G+ P T+YV
Sbjct: 274 EAVDLFREMQS-------EGIEPNSVTIPSHPMMAAITEKLKHLTMEMRRLGFAPNTDYV 326
Query: 177 LRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENR 236
L D++++ K+ + SE+LAVA GLIST G LR+ KNLRICG+CH +K +SS E R
Sbjct: 327 LHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLRVIKNLRICGDCHEAMKFISSFERR 386
Query: 237 EIIVRD 242
EI VRD
Sbjct: 387 EIYVRD 392
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 67/123 (54%), Gaps = 5/123 (4%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
R G+ PN +TFVGV++AC G V+EG + F S+ R Y + PTLEH+ +VDL GR
Sbjct: 518 RMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRS 577
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTE 174
I EA EFI+ M ++A VVW L L +GE R++ K P +
Sbjct: 578 GHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGE-----RVAEKMFSFDPKPISS 632
Query: 175 YVL 177
YV+
Sbjct: 633 YVI 635
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 54/77 (70%)
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
GY P T VL ++D+E KE Y SE++A+A+GLIST P LRI KNLRIC +CH+
Sbjct: 538 VGYRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSS 597
Query: 227 IKKLSSIENREIIVRDK 243
IK +S I R+IIVRD+
Sbjct: 598 IKLISKIYKRKIIVRDR 614
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
++ AL+V + L + S I L L+ + E GV P+ T++G+++A
Sbjct: 310 IEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSA 369
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G V+EG F+ + R + P +EH+ +VDL GR + E+ E I NM I V
Sbjct: 370 CSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDV 429
Query: 135 VWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
+W+ L + + +G+ + + D+G
Sbjct: 430 IWKALLGACKMHGNVEMGKRVAEHLMELAPHDSG 463
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 56/83 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K GY P TE V+ D++ E KE + SE+LA+A+ L+ T PG T+R+ KNLR+
Sbjct: 545 LGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRV 604
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH IK +S I +REIIVRD
Sbjct: 605 CSDCHTAIKLISRITHREIIVRD 627
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 52/81 (64%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ E GV+ N +TF+G++ +C G + +G ++F ++T+ Y I+P +EH+ IVDL R
Sbjct: 364 QMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRA 423
Query: 115 QKIAEAREFIRNMQIDASSVV 135
+ EA + I +M + A++V+
Sbjct: 424 GLLQEAHQLIDDMPMPANAVI 444
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD-YDINPTLEHFLGIVDLYGRL 114
+ +GVRP+ G ++AC GA+D G Q V D + NP L ++D+Y +
Sbjct: 264 MQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG--TALIDMYAKC 321
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
AEA + M+ +VW +
Sbjct: 322 GSTAEAWVVFQQMR-KKDIIVWNAM 345
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+P TE+VL +++QE KE E+LA+A+ LI T PG T+RI KNL++CG+CH+ +
Sbjct: 627 GYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAFALICTSPGMTIRIVKNLQVCGDCHSLM 686
Query: 228 KKLSSIENREIIVRD 242
K S I REI++RD
Sbjct: 687 KYASKISQREIMLRD 701
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++P+ F+ ++TAC G VD G F+S+ DY I P+++H+ IVD+ GR ++ E
Sbjct: 443 GIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKE 502
Query: 120 AREFIRNMQIDASSVVWETL 139
A FI M ++ V+W L
Sbjct: 503 ALRFIERMPMNPDFVIWGAL 522
>gi|215713517|dbj|BAG94654.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635568|gb|EEE65700.1| hypothetical protein OsJ_21333 [Oryza sativa Japonica Group]
Length = 382
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 57/84 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL ++ + GY P TE+VL+DL E KE Y SE+LA+A+G ++ G+ +RI KNLR
Sbjct: 281 RLFSRVTNLGYTPQTEFVLQDLATEQKEDLLKYHSEKLAIAFGTMNAMEGKPIRIMKNLR 340
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
ICG+CH F K +S E + II+RD
Sbjct: 341 ICGDCHAFAKLVSKSEGKVIIIRD 364
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 50 LEAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
+EA K F+ ++G RPN T VGV+ AC G V++G+ +F S+ + + I P EH
Sbjct: 93 IEALKVFDMMKSEGPRPNHITMVGVLFACSHAGLVEDGWYYFSSMEKLFGIQPEREHCNC 152
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+VDL GR K+ +A +FI M SV+W TL
Sbjct: 153 MVDLLGRAGKLDDAVKFIHEMNFQPDSVIWRTL 185
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 59/83 (71%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ + K AGY+P T+YVL + ++ +E Y SE++A+A+ LI+ P G T+RI KN+RI
Sbjct: 535 VNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRI 594
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ + +S + REI+VRD
Sbjct: 595 CGDCHSAFRYVSEVFKREIVVRD 617
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++ N TF+ V+TAC G V EG Q+F+ + +DY++ P ++H++ VDL GR + E
Sbjct: 360 GIQLNQITFLSVLTACSHGGLVKEGKQYFD-MMKDYNVEPEIDHYVSFVDLLGRAGLLKE 418
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRD 179
A F+ M ++ ++ VW L + +G+ ++ +D G +L +
Sbjct: 419 ALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTG----PPVLLYN 474
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREII 239
+ + R ++ A G+ P + I+ ++ H F+ S+ E I
Sbjct: 475 IYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSV------HMFVADDSTHPKSEEI 528
Query: 240 VR 241
R
Sbjct: 529 YR 530
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 114/271 (42%), Gaps = 79/271 (29%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH---- 103
EA K F+ +GV + TF +++AC G V+EG ++FE ++ Y + P L+H
Sbjct: 406 EAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCM 465
Query: 104 -------------------------------FLGIVDLYGRLQ---KIAEA--------- 120
LG +YG ++ ++AE
Sbjct: 466 VDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDH 525
Query: 121 REFIRNMQIDASSVVWETL--------EKYAQTEPGLLLGEPSSSLR------------- 159
R +I I +++ +W E+ PG E + +
Sbjct: 526 RNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSD 585
Query: 160 --------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
L K ++AG P TE+VL D+D+E K SE+LA+A+GL+ T G L
Sbjct: 586 EIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPL 645
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRD 242
I KNLRICG+CH+ K S +E R II+RD
Sbjct: 646 IITKNLRICGDCHSTAKFASLLEKRTIIIRD 676
>gi|296085509|emb|CBI29241.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 54/77 (70%)
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
GY P T VL ++D+E KE Y SE++A+A+GLIST P LRI KNLRIC +CH+
Sbjct: 421 VGYRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSS 480
Query: 227 IKKLSSIENREIIVRDK 243
IK +S I R+IIVRD+
Sbjct: 481 IKLISKIYKRKIIVRDR 497
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%)
Query: 41 LNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPT 100
L +C+ L+ + E GV P+ T++G+++AC G V+EG F+ + R + P
Sbjct: 219 LMMCLAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPR 278
Query: 101 LEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRL 160
+EH+ +VDL GR + E+ E I NM I V+W+ L + + +G+ + +
Sbjct: 279 IEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLM 338
Query: 161 SNKKKDAG 168
D+G
Sbjct: 339 ELAPHDSG 346
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 106/194 (54%), Gaps = 16/194 (8%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP--TLEHFLGIVDLYGRLQKIA 118
+RP+ S + ++ AC G + G E + ++++P + H L + +++ + A
Sbjct: 487 MRPSISVWGALLGACKMHGKTELGRIAAEKL---FELDPQDSGNHVL-LSNMFASAGRWA 542
Query: 119 EA---REFIRNMQI----DASSVVWETLEKY--AQTEPGLLLGEPSSSL-RLSNKKKDAG 168
EA R+ ++N+ I S V W+ + A+ + E + L +L + + AG
Sbjct: 543 EATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAG 602
Query: 169 YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIK 228
YMP T+Y L DL++E KE SE+LA+A+GLI PPG +RI KNLRIC +CH K
Sbjct: 603 YMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFK 662
Query: 229 KLSSIENREIIVRD 242
+S I REIIVRD
Sbjct: 663 FISGIVGREIIVRD 676
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN+ T V VIT+C G +G++ FE++ + I P EH+ +VDL GR +A E
Sbjct: 421 PNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYE 480
Query: 123 FIRNMQIDASSVVWETL----EKYAQTEPGLLLGE 153
I+ M + S VW L + + +TE G + E
Sbjct: 481 VIQGMPMRPSISVWGALLGACKMHGKTELGRIAAE 515
>gi|358357196|gb|AEU08438.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 152
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + ++AGY+P T + L D++++ K+ + SE+LA+A+GLI+T PG + + KNLR
Sbjct: 58 RLSGQMQEAGYVPDTRFGLLDVEEDQKKISLCHHSEKLAIAFGLINTAPGTPIHVVKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CGECH K +S I R ++VRD
Sbjct: 118 VCGECHTATKFISKIVGRAVVVRD 141
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
++AGY P +VL D+D+E K + SERLAVAYGL+ P G +R+ KNLR+CG+CH
Sbjct: 609 REAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCH 668
Query: 225 NFIKKLSSIENREIIVRD 242
IK +S + REII+RD
Sbjct: 669 AAIKLISKVTEREIILRD 686
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
VKA L V D+ + I + + I + + + L+ + G PN T + ++TA
Sbjct: 383 VKAKL-VFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTA 441
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G ++EG + FES+ + + PT+EH+ VD+ GR ++ +A E I +M I +
Sbjct: 442 CSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDAT 501
Query: 135 VWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
VW L +T L L E ++ N+ +AG
Sbjct: 502 VWGALLGACKTHSRLDLAEVAAKKLFENEPDNAG 535
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 111/265 (41%), Gaps = 78/265 (29%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
E + N F+ ++ AC G D+G + F+ + Y P L+H+ +VDL GR
Sbjct: 371 EQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGC 430
Query: 117 IAEAREFIRNMQIDASSVVWETL-----------------EKYAQTEPG-----LLLG-- 152
+ +A IR+M I V+W+TL ++ Q +P +LL
Sbjct: 431 LDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANV 490
Query: 153 -----------EPSSSLRLSNKKKDAGYMPYTEY----------------------VLRD 179
E S+R N KK+AG + + E+ L++
Sbjct: 491 HASAKRWRDVSEVRKSMRDKNVKKEAG-ISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKE 549
Query: 180 LDQEAK---EKPQT-----------------YRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L E K KP T SE+LAVA+ L+ P G +RI KNLR+
Sbjct: 550 LTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRV 609
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
C +CH K +S I+NREI +RD +
Sbjct: 610 CSDCHVAFKYISVIKNREITLRDGS 634
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K +DAGY+P VL D++ + KE+ SERLA+A+GLI P G ++RI KNLRI
Sbjct: 680 LYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRI 739
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH IK +S I REI++RD
Sbjct: 740 CVDCHAVIKLVSKIVQREIVIRD 762
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
+PN TFVGV++AC G +D+G HF+S+ +DY I P +EH+ +V L GR + EA
Sbjct: 506 KPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAV 565
Query: 122 EFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLD 181
+ I + S +VW L L LG+ + L + +D T +L ++
Sbjct: 566 KLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDA----THVLLSNMY 621
Query: 182 QEAK 185
AK
Sbjct: 622 ATAK 625
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 57/87 (65%)
Query: 158 LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
+ + + + GY+ T V D++ E KE+ Y SE+LA+A+GLI PP T+RI KNL
Sbjct: 442 IEIGGRMQQHGYVTETAEVFYDIEDEEKEQALGYHSEKLAIAFGLIGGPPEATIRIVKNL 501
Query: 218 RICGECHNFIKKLSSIENREIIVRDKT 244
R C +CH+F K +S I +REI+VRD+
Sbjct: 502 RFCTDCHSFAKLVSKIYHREIVVRDRA 528
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDG-VRPNWSTFVGVIT 73
V+ ALEV L+ + I L K L+ ++ E +G V P+ TFVGV+
Sbjct: 225 VELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGVLL 284
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
AC G VD G +HF ++ + Y + LEH+ +VDL R + EA + I M +
Sbjct: 285 ACSHAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKPDV 344
Query: 134 VVWETL 139
VVW L
Sbjct: 345 VVWRAL 350
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS + K+AGY+P VL D+D+E KEK SE+LA+ +GLI+TP +R+ KNLRI
Sbjct: 534 LSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRI 593
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
C +CHNF K S I RE+ +RDK
Sbjct: 594 CVDCHNFAKYTSKIYGREVSLRDK 617
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 36 DIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTR-D 94
+++EL N+ +D EN V+P+ T + V++ C G D+G F +T
Sbjct: 344 EVLELFNLMID----------ENK-VKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGK 392
Query: 95 YDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEP 154
+ P +H+ +VD+ GR ++ A EF++ M + S+ +W L L +GE
Sbjct: 393 ISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEF 452
Query: 155 SSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
L + ++AG YV+ + + + RS R + ++ PGR+
Sbjct: 453 VGHQLLQIEPENAG-----NYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRS 503
>gi|190612905|gb|ACE80830.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K+AGY P T +VL D+ +E K + SE+LA+A+GL++T PG L+I KNLR
Sbjct: 58 RLSEQMKEAGYEPDTRFVLHDVSEEEKVVRLCHHSEKLAIAFGLLNTVPGTRLQIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ I REI+VRD
Sbjct: 118 VCVDCHTATKFMAKIAGREIVVRD 141
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+S + + AGY+P T+YVL +D++ ++ Y SE++A+A+ LI+ P G T+RI KN+RI
Sbjct: 537 ISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRI 596
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ + +S + REI+VRD
Sbjct: 597 CGDCHSAFRYISKVFKREIVVRD 619
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV N TF+ ++TAC G V EG Q+F+ + ++Y++ P ++H++ +VDL GR + +
Sbjct: 362 GVHLNQITFLSILTACSHGGLVKEGKQYFD-MMKEYNLEPEIDHYVTVVDLLGRAGLLND 420
Query: 120 AREFIRNMQIDASSVVWETL 139
A FI M + ++ VW L
Sbjct: 421 ALVFIFKMPMKPTAAVWGAL 440
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
++AGY P +VL D+D+E K + SERLAVAYGL+ P G +R+ KNLR+CG+CH
Sbjct: 609 REAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCH 668
Query: 225 NFIKKLSSIENREIIVRD 242
IK +S + REII+RD
Sbjct: 669 AAIKLISKVTEREIILRD 686
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
G PN T + ++TAC G ++EG + FES+ + + PT+EH+ VD+ GR K+
Sbjct: 426 SGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVD 485
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPY 172
+A E I +M I + VW L +T L L E ++ + ++AG PY
Sbjct: 486 KAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAG--PY 537
>gi|357111099|ref|XP_003557352.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 685
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L + KD GY T+ V D+++E +E + SE+LA+A+G+ISTP G LRI KNLR
Sbjct: 584 KLMERLKDLGYTSRTDLVAHDVEEEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLR 643
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH IK +S +REI+VRD
Sbjct: 644 VCVDCHEAIKYVSQATDREIVVRD 667
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
+E R + + PN T VGV++AC V+EG F+ + +Y I P++EH+ +VD
Sbjct: 399 IELFNRMTAEKITPNEITLVGVLSACSHGRLVNEGDHFFKLMQDEYGIVPSIEHYNCMVD 458
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
LYGR + +A FI+ I ++VW+TL
Sbjct: 459 LYGRAGMLYKAHNFIKENNIKHEAIVWKTL 488
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 81/140 (57%), Gaps = 13/140 (9%)
Query: 113 RLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSS------LRLSN--- 162
R + +AE R+ + N I + W ++K +LG+ S RL++
Sbjct: 469 RWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHV---FILGDTSHPKIEEIVQRLNDLIE 525
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
+ GY+P T +VL+DL+ E KE Y SE+LA+ +GL++ +T+RI+KNLRICG+
Sbjct: 526 RVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLRICGD 585
Query: 223 CHNFIKKLSSIENREIIVRD 242
CH F K +S +E+R I++RD
Sbjct: 586 CHVFAKVVSRMEHRSIVIRD 605
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE + + G RPN+ T +GV+ AC G V++G+ +F S+ + + ++P EH+ ++D
Sbjct: 337 LELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLID 396
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
L GR ++ EA + I M+ + SV W TL + + L ++ + + +DAG
Sbjct: 397 LLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAG- 455
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
T +L ++ + + G+ TP + + K + +
Sbjct: 456 ---TYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHV 502
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 60/85 (70%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ + + AG++ T VL DLD+E KE + SE+LA+A+ L+ TPPG +R+ KNLR+
Sbjct: 519 MARELRRAGHISATSEVLLDLDEEDKEVALQWHSEKLAIAFVLLRTPPGTQVRVVKNLRV 578
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
C +CH IK +S + NREIIVRD++
Sbjct: 579 CSDCHAAIKCISLVYNREIIVRDRS 603
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 6/154 (3%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFE---ND 59
N+ + L + ++ A+ V +K I + +I+ L M+ + EA FE
Sbjct: 286 NALIDALAKCGDLDGAMAVFQGMKERTI-VSWTSVIDAL--AMEGRGKEAVAVFEEMKTA 342
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GVRP+ F+GV+TAC G VDEG+ +FES+ Y I+P +EH+ +VD++GR +
Sbjct: 343 GVRPDDVAFIGVLTACSHAGMVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGMVER 402
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
A EF+ M + + ++W TL + L LGE
Sbjct: 403 AMEFVHKMPMKPNPIIWRTLVAACRAHGRLELGE 436
>gi|125578382|gb|EAZ19528.1| hypothetical protein OsJ_35094 [Oryza sativa Japonica Group]
Length = 591
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 53/291 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG--------- 53
N+ L L +AAL ++D++ G+ +D ++ ++ C L++ G
Sbjct: 289 NAMLHGLAVHGHGRAALSLLDRMHGAGVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEI 348
Query: 54 -----KRFENDG-----------------------VRPNWSTFVGVITACGCFGAVDEGF 85
R E+ G + PN + + +I ACG G ++ G
Sbjct: 349 EFGIEPRIEHYGCMIDMLSRAGRLNNAEKLIHEMLIVPNAAIYRSLIRACGIHGKLELGE 408
Query: 86 QHFESVTRDYDINPTLEHFLGIVDLYGRLQK---IAEAREFIRNMQIDASSVVWETLEKY 142
+ + R + + + H L I + Y R + +AR+ +++M ID + +L
Sbjct: 409 KMIAELMR-LEPDDSGNHVL-ISNFYARTNRWEDAKKARKEMKSMGIDKNP--GSSLVDI 464
Query: 143 AQTEPGLLLGE---PSSSL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
L+G+ P+S + + + G T L D+++E K +Y S
Sbjct: 465 NGVLHEFLVGDKTHPASKEIYTMVEEIETRLIECGRRSSTSSALFDVEEEDKADTLSYHS 524
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
ERLA+A+ LI++ PG +RI KNLR+C +CH K +S + REI++RD+T
Sbjct: 525 ERLAIAFALIASNPGAPIRIIKNLRVCADCHESAKLVSRVYGREIVMRDRT 575
>gi|383157260|gb|AFG60953.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
Length = 149
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K+AGY+P T VL+D+++E KE SE+LA+A+G+I+T PG +RI KNL I
Sbjct: 49 LYGQMKEAGYVPKTNPVLQDVEEEMKETVLFSHSEKLAIAFGVINTSPGNPIRIVKNLHI 108
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CHN IK +S I R IIVRD
Sbjct: 109 CTDCHNAIKFISKIVGRVIIVRD 131
>gi|190612917|gb|ACE80836.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 57/84 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K AGY+P T +VL D+ + K + SERLA+A+GL+ST PG LR+ KNLR
Sbjct: 58 RLSEQMKVAGYVPDTRFVLHDVGEGEKVLRLCHHSERLAIAFGLLSTVPGTPLRLHKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ I REI+VRD
Sbjct: 118 VCVDCHTATKFIAKIVGREIVVRD 141
>gi|125535518|gb|EAY82006.1| hypothetical protein OsI_37188 [Oryza sativa Indica Group]
Length = 144
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K GY P TE V+ D++ E KE + SE+LA+A+ L+ T PG T+R+ KNLR+C +CH
Sbjct: 49 KTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCH 108
Query: 225 NFIKKLSSIENREIIVRD 242
IK +S I +REIIVRD
Sbjct: 109 TAIKLVSRITHREIIVRD 126
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 132/276 (47%), Gaps = 54/276 (19%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
+AAL++ DK+K + + + +++ C L++ G R ++ G+ P+ +
Sbjct: 533 RAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGA 592
Query: 71 VITACGCFGAVDEGFQHFESVTRDYDINPTLEHF---LGIVDLYGRLQKIAEAREFIRNM 127
++ G G + E + E++ I+P + + LG ++ ++ +A + + +
Sbjct: 593 MVDLLGRAGRIKEAWDFIENMP----ISPGITVYGAMLGACKIHKNIEVGEKAAKKLFEL 648
Query: 128 QID------------ASSVVW-------ETLEKYA-QTEPGLLLGE---------PSSSL 158
D AS+ W +T+EK + PG + E S+
Sbjct: 649 NPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTT 708
Query: 159 RLSNKK------------KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTP 206
+K+ K AGY+P T +L D++ + +E+ SE+LA+A+GL++T
Sbjct: 709 HPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTS 767
Query: 207 PGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
PG T+ ++KNLR+CG+CHN K +S + REIIVRD
Sbjct: 768 PGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRD 803
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 103/196 (52%), Gaps = 16/196 (8%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD--YDINPTLEHFLGIVDLYGRLQKIA 118
++PN + +++AC G ++ G ES+TR ++ +++ + +++ Q+
Sbjct: 395 IQPNPVIWRSLVSACRAHGRLELG----ESITRSLLHEYPAHEANYIMLSNVFALTQRWK 450
Query: 119 EAREFIRNM------QIDASSVV---WETLEKYAQTEPGLLLGEPSSSLR-LSNKKKDAG 168
E E R M ++ S+V E E A E + + ++ + + G
Sbjct: 451 EKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVG 510
Query: 169 YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIK 228
++ T VL DLD+E KE + SE+LA+A+ L+ TPPG +R+ KNLR+C +CH IK
Sbjct: 511 HIAATSEVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIK 570
Query: 229 KLSSIENREIIVRDKT 244
+S + REI+VRD++
Sbjct: 571 CISQVYRREIVVRDRS 586
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEN---D 59
N+ + L + +V A+ V + ++ + + +I+ L M+ + EA + FE
Sbjct: 269 NALIDTLAKCGDVDGAVAVFEGMQQRSV-VSWTSVIDAL--AMEGRGKEAVRVFEEMKVA 325
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV P+ F+GV+TAC G VDEG +F+++ +Y I P +EH+ +VD++GR +
Sbjct: 326 GVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVER 385
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEP-SSSLRLSNKKKDAGYMPYTEYVLR 178
A EF+R M I + V+W +L + L LGE + SL +A Y+ +
Sbjct: 386 AMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVF-- 443
Query: 179 DLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
L Q KEK + R ++ I PG ++ + + GE H FI
Sbjct: 444 ALTQRWKEKSEIRRE----MSKRGIKKVPGCSI-----VELDGEVHEFI 483
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
G+ PN +TFVGV++AC G V+EG + F S+ R Y + PTLEH+ +VDL GR I
Sbjct: 562 QGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIR 621
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVL 177
EA EFI+ M ++A VVW L L +GE R++ K P + YV+
Sbjct: 622 EAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGE-----RVAEKMFSFDPKPISSYVI 675
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 134/323 (41%), Gaps = 88/323 (27%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK------- 54
+N+ L R +V A+ E+ DK+ S D+I + M + GK
Sbjct: 449 MNAVLHMYARSGDVVASREIFDKMV-------SKDVISWNTMIMGYAIHGQGKTALEMFD 501
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD----- 109
+ +G++PN STFV V+TAC G VDEG+ HF + ++Y + P +EH+ + D
Sbjct: 502 EMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGRE 561
Query: 110 --------------------LYGRLQK---------IAE-AREFIRNMQID--------- 130
++G L IAE A E I ++ D
Sbjct: 562 GDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLS 621
Query: 131 ---ASSVVWETLEKY--AQTEPGLLLGEPSSSLRLSNKKKD--AGYMPYTE--------- 174
A + WE +E+ E GL EP S + L + G M +++
Sbjct: 622 SMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSD 681
Query: 175 YVLRDLDQEAKEKPQTY--------------RSERLAVAYGLISTPPGRTLRIKKNLRIC 220
+ R + + + Q+Y S RLAV +GLIS+ G + +KKN+RIC
Sbjct: 682 ILSRKIKETDDTRNQSYPVPVATRTTTMPNKHSVRLAVVFGLISSEIGSPILVKKNVRIC 741
Query: 221 GECHNFIKKLSSIENREIIVRDK 243
CH+ +K +S R I+V D
Sbjct: 742 NHCHHALKLISRYSGRRIVVGDS 764
>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 565
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 111/265 (41%), Gaps = 78/265 (29%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
E + N F+ ++ AC G D+G + F+ + Y P L+H+ +VDL GR
Sbjct: 286 EQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGC 345
Query: 117 IAEAREFIRNMQIDASSVVWETL-----------------EKYAQTEPG-----LLLG-- 152
+ +A IR+M I V+W+TL ++ Q +P +LL
Sbjct: 346 LDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANV 405
Query: 153 -----------EPSSSLRLSNKKKDAGYMPYTEY----------------------VLRD 179
E S+R N KK+AG + + E+ L++
Sbjct: 406 HASAKRWRDVSEVRKSMRDKNVKKEAG-ISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKE 464
Query: 180 LDQEAK---EKPQT-----------------YRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L E K KP T SE+LAVA+ L+ P G +RI KNLR+
Sbjct: 465 LTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRV 524
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
C +CH K +S I+NREI +RD +
Sbjct: 525 CSDCHVAFKYISVIKNREITLRDGS 549
>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 111/265 (41%), Gaps = 78/265 (29%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
E + N F+ ++ AC G D+G + F+ + Y P L+H+ +VDL GR
Sbjct: 284 EQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGC 343
Query: 117 IAEAREFIRNMQIDASSVVWETL-----------------EKYAQTEPG-----LLLG-- 152
+ +A IR+M I V+W+TL ++ Q +P +LL
Sbjct: 344 LDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANV 403
Query: 153 -----------EPSSSLRLSNKKKDAGYMPYTEY----------------------VLRD 179
E S+R N KK+AG + + E+ L++
Sbjct: 404 HASAKRWRDVSEVRKSMRDKNVKKEAG-ISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKE 462
Query: 180 LDQEAK---EKPQT-----------------YRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L E K KP T SE+LAVA+ L+ P G +RI KNLR+
Sbjct: 463 LTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRV 522
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
C +CH K +S I+NREI +RD +
Sbjct: 523 CSDCHVAFKYISVIKNREITLRDGS 547
>gi|414885893|tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea mays]
Length = 584
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 59/94 (62%), Gaps = 7/94 (7%)
Query: 150 LLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQE-AKEKPQTYRSERLAVAYGLISTPPG 208
+LGE + + K +GY P T VL D+D E KE SE+LA+A+GLIST PG
Sbjct: 479 MLGE------ICQQLKSSGYTPDTSQVLLDIDDEDVKESSLALHSEKLAIAFGLISTAPG 532
Query: 209 RTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+R+ NLRICG+CHN IK +S I R IIVRD
Sbjct: 533 TPIRVVNNLRICGDCHNAIKLISKIYGRCIIVRD 566
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 12/181 (6%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ LE R E+ + PN TF V+ AC G V+EG ++F+ ++R Y I P + H+ +
Sbjct: 295 RALELFTRMESTRLMPNKITFNTVLNACSHGGLVEEGMKYFQRMSRFYGIEPDIAHYGCM 354
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD- 166
VDL+ R +A E I+ M ++ + + + L +T L LG+ + D
Sbjct: 355 VDLFCRAGMFEKAEEIIQTMPMEPDASMLKALLGACRTHKNLELGKKVGHRLIEAAANDH 414
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
AGY+ + D + ++ +L + G++ TP ++ + G H F
Sbjct: 415 AGYVLLSNIYALDGNWGG-----VHKVRKLMLDRGVLKTPGSSSVELN------GVIHEF 463
Query: 227 I 227
I
Sbjct: 464 I 464
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K K AGY P T+YVL D+DQE K + SE+LAVA+G+++ T+R+ KNLRI
Sbjct: 852 LFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRI 911
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN IK +S++ I+VRD
Sbjct: 912 CGDCHNAIKYMSNVVGVTIVVRD 934
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+P+ +TF V++AC V+EG Q F S++RD+ + P EH+ +VD+Y R + EA
Sbjct: 677 VKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEA 736
Query: 121 REFIRNMQIDASSVVWETL 139
FI+ M ++ +++ W+
Sbjct: 737 YGFIQRMPMEPTAIAWKAF 755
>gi|297728815|ref|NP_001176771.1| Os12g0128300 [Oryza sativa Japonica Group]
gi|255670010|dbj|BAH95499.1| Os12g0128300 [Oryza sativa Japonica Group]
Length = 587
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 53/291 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG--------- 53
N+ L L +AAL ++D++ G+ +D ++ ++ C L++ G
Sbjct: 285 NAMLHGLAVHGHGRAALSLLDRMHGAGVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEI 344
Query: 54 -----KRFENDG-----------------------VRPNWSTFVGVITACGCFGAVDEGF 85
R E+ G + PN + + +I ACG G ++ G
Sbjct: 345 EFGIEPRIEHYGCMIDMLSRAGRLNNAEKLIHEMLIVPNAAIYRSLIRACGIHGKLELGE 404
Query: 86 QHFESVTRDYDINPTLEHFLGIVDLYGRLQK---IAEAREFIRNMQIDASSVVWETLEKY 142
+ + R + + + H L I + Y R + +AR+ +++M ID + +L
Sbjct: 405 KMIAELMR-LEPDDSGNHVL-ISNFYARTNRWEDAKKARKEMKSMGIDKNP--GSSLVDI 460
Query: 143 AQTEPGLLLGE---PSSSL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
L+G+ P+S + + + G T L D+++E K +Y S
Sbjct: 461 NGVLHEFLVGDKTHPASKEIYTMVEEIETRLIECGRRSSTSSALFDVEEEDKADTLSYHS 520
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
ERLA+A+ LI++ PG +RI KNLR+C +CH K +S + REI++RD+T
Sbjct: 521 ERLAIAFALIASNPGAPIRIIKNLRVCADCHESAKLVSRVYGREIVMRDRT 571
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 113/271 (41%), Gaps = 79/271 (29%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEH---- 103
EA K F+ +GV + TF +++AC G V+EG ++FE ++ Y + P L+H
Sbjct: 426 EAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCM 485
Query: 104 -------------------------------FLGIVDLYGRLQ---KIAEA--------- 120
LG +YG ++ ++AE
Sbjct: 486 VDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDH 545
Query: 121 REFIRNMQIDASSVVWETL--------EKYAQTEPGLLLGEPSSSLR------------- 159
R +I I +++ +W E+ PG E + +
Sbjct: 546 RNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSD 605
Query: 160 --------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
L K +AG P TE+VL D+D+E K SE+LA+A+GL+ T G L
Sbjct: 606 EIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPL 665
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRD 242
I KNLRICG+CH+ K S +E R II+RD
Sbjct: 666 IITKNLRICGDCHSTAKFASLLEKRTIIIRD 696
>gi|190612915|gb|ACE80835.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + ++AGY+P T +VL ++ +E K + SE+LA+A+GLIST PG LRI KNLR
Sbjct: 58 RLAEQMEEAGYVPDTRFVLHNVKKEEKVFRLCHHSEKLAIAFGLISTAPGTPLRIFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
C +CH K +S I +REI+VRD
Sbjct: 118 ACVDCHTATKFMSKIVDREIVVRD 141
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 54/77 (70%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+P T V+ DL++ KE SERLAVA+GLI +PPG +R+ KNLR+C +CH +
Sbjct: 518 GYVPDTSSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVM 577
Query: 228 KKLSSIENREIIVRDKT 244
K +S I +R+I+VRD +
Sbjct: 578 KLISEITHRKIVVRDSS 594
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G +PN TFVG+I AC G V +G Q FES+ +Y I P L+H+ +DL R + E
Sbjct: 334 GAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLE 393
Query: 120 AREFIRNMQIDASSVVWETL 139
A E + M + W L
Sbjct: 394 AEELMTTMPYEPDEATWGAL 413
>gi|190612865|gb|ACE80810.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 57/86 (66%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + +DAGY+P T VL D+++E + SE+LA+A GL+ T PG LRI KNLR
Sbjct: 58 RLSKQMRDAGYVPDTRVVLHDVEEEENVYRLCHHSEKLAIALGLLCTVPGTPLRIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+C +CH K ++ I REIIVRD T
Sbjct: 118 VCVDCHTATKFMAKIVGREIIVRDAT 143
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 13/141 (9%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL---------RLS 161
G+ + +A+ R+ + + ++ S + W ++ L G+ S L R+
Sbjct: 395 GKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVH---AFLSGDTSHPLSDEIYSELERVG 451
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
K+AGY P T V D++ + K SERLA+A+GLISTPPG L I KNLRIC
Sbjct: 452 GLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICE 511
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH IK +S I REI VRD
Sbjct: 512 DCHVAIKFISKITEREITVRD 532
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
Query: 15 VKAALEVMDK-LKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFE--NDGVRPNWSTFVGV 71
V +A EV DK L + + S + + + M EA FE N +P+ TFVGV
Sbjct: 227 VGSAREVFDKILVRDAVLVVSWNAM-ITGYAMHGHATEALDLFEEMNRVAKPDHITFVGV 285
Query: 72 ITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDA 131
++AC G ++EG+ FE++ RDY I+PT++H+ +VDL G ++ EA I M++
Sbjct: 286 LSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLP 345
Query: 132 SSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
S VW L + + LGE + + + DAG
Sbjct: 346 DSGVWGALLNSCKIHANVELGEIALERLIELEPDDAG 382
>gi|190612869|gb|ACE80812.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 59/84 (70%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K+AGY+P T++VL D+++E K + SE+LA+A+G +ST G LRI KNLR
Sbjct: 58 RLSEQMKEAGYVPDTQFVLHDVEEEEKIFRLCHHSEKLAIAFGFLSTVAGTPLRIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ + REI+VRD
Sbjct: 118 VCVDCHTATKLMAELVGREIVVRD 141
>gi|77553572|gb|ABA96368.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 605
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 53/291 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG--------- 53
N+ L L +AAL ++D++ G+ +D ++ ++ C L++ G
Sbjct: 303 NAMLHGLAVHGHGRAALSLLDRMHGAGVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEI 362
Query: 54 -----KRFENDG-----------------------VRPNWSTFVGVITACGCFGAVDEGF 85
R E+ G + PN + + +I ACG G ++ G
Sbjct: 363 EFGIEPRIEHYGCMIDMLSRAGRLNNAEKLIHEMLIVPNAAIYRSLIRACGIHGKLELGE 422
Query: 86 QHFESVTRDYDINPTLEHFLGIVDLYGRLQK---IAEAREFIRNMQIDASSVVWETLEKY 142
+ + R + + + H L I + Y R + +AR+ +++M ID + +L
Sbjct: 423 KMIAELMR-LEPDDSGNHVL-ISNFYARTNRWEDAKKARKEMKSMGIDKNP--GSSLVDI 478
Query: 143 AQTEPGLLLGE---PSSSL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
L+G+ P+S + + + G T L D+++E K +Y S
Sbjct: 479 NGVLHEFLVGDKTHPASKEIYTMVEEIETRLIECGRRSSTSSALFDVEEEDKADTLSYHS 538
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
ERLA+A+ LI++ PG +RI KNLR+C +CH K +S + REI++RD+T
Sbjct: 539 ERLAIAFALIASNPGAPIRIIKNLRVCADCHESAKLVSRVYGREIVMRDRT 589
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
+ GY+P T+ VL DL++E KE+ ++ SE+LAVA+GL+ST G T+RI KNLR C +CH+
Sbjct: 570 EGGYVPSTKQVLFDLNEEDKEQAVSWHSEKLAVAFGLLSTQEG-TIRITKNLRTCEDCHS 628
Query: 226 FIKKLSSIENREIIVRDKT 244
+K +S + NREI+VRD++
Sbjct: 629 AMKTISLVFNREIVVRDRS 647
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+G +P+ T +GV+ C G V+EG F + + I P LEH+ ++DL GR ++
Sbjct: 385 EGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLE 444
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
A E I++M ++ V W L + + LGE
Sbjct: 445 SAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGE 479
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 13/141 (9%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSSL---------RLS 161
G+ + +A+ R+ + + ++ S + W ++ L G+ S L R+
Sbjct: 493 GKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVH---AFLSGDTSHPLSDEIYSELERVG 549
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
K+AGY P T V D++ + K SERLA+A+GLISTPPG L I KNLRIC
Sbjct: 550 GLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICE 609
Query: 222 ECHNFIKKLSSIENREIIVRD 242
+CH IK +S I REI VRD
Sbjct: 610 DCHVAIKFISKITEREITVRD 630
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 51 EAGKRFE--NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIV 108
EA FE N +P+ TFVGV++AC G ++EG+ FE++ RDY I+PT++H+ +V
Sbjct: 361 EALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMV 420
Query: 109 DLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
DL G ++ EA I M++ S VW L + + LGE + + + DAG
Sbjct: 421 DLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAG 480
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 57/83 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+S K + GY+P +YVL +D++ +E Y SE++A+A+ LI P G T+RI KN+RI
Sbjct: 524 ISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRI 583
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ K +S + REI+VRD
Sbjct: 584 CGDCHSAFKYISKVFEREIVVRD 606
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA FE G+ N TF+ ++TAC G V EG +H+ + ++Y++ P +EH++ +
Sbjct: 337 EAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEG-KHYFDMIKEYNLEPEIEHYVTV 395
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
VDL GR + A FI M ++ ++ VW L
Sbjct: 396 VDLLGRAGLLNYALVFIFKMPMEPTAAVWGAL 427
>gi|387169524|gb|AFJ66185.1| hypothetical protein 11M19.3 [Arabidopsis halleri]
Length = 511
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 58/276 (21%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
A+ V +++ + DS + LL C LL GK + + ++P + ++
Sbjct: 227 AIRVFSEMEAEHVSPDSITFLGLLTACSHCGLLGKGKVYFDIMSQRFSIQPKLEHYGAMV 286
Query: 73 TACGCFGAVDEGFQHFESVTRDYDI--------------NPTLEHFLGIVDLYGRLQKIA 118
G G V E ++ ES+ + D+ NP L +Q ++
Sbjct: 287 DLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEI--------AIQNLS 338
Query: 119 EAR--EFIRNMQIDASSVVWETLEKYAQ--TEPGLLLGEPSSSLR--------------- 159
+A+ +++ I +++ WE+ +K + T+ G+ + S +
Sbjct: 339 KAKSGDYVLLSNIYSTTKKWESAQKVRELMTKEGIRKAKGKSWVEYGGVIHRFKAGDTSH 398
Query: 160 ------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPP 207
L K K G++ T+ VL D+ +E KE+ Y SE+LA+AY ++ + P
Sbjct: 399 IEIKAIYKVLEGLIQKTKSEGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSP 458
Query: 208 GRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
G +RI+KN+R+C +CHN+IK +S + NR II+RD+
Sbjct: 459 GTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDR 494
>gi|367062896|gb|AEX11730.1| hypothetical protein 0_16763_01 [Pinus taeda]
gi|367062900|gb|AEX11732.1| hypothetical protein 0_16763_01 [Pinus taeda]
gi|367062912|gb|AEX11738.1| hypothetical protein 0_16763_01 [Pinus taeda]
gi|367062918|gb|AEX11741.1| hypothetical protein 0_16763_01 [Pinus taeda]
gi|367062924|gb|AEX11744.1| hypothetical protein 0_16763_01 [Pinus taeda]
gi|367062928|gb|AEX11746.1| hypothetical protein 0_16763_01 [Pinus taeda]
gi|367062930|gb|AEX11747.1| hypothetical protein 0_16763_01 [Pinus radiata]
Length = 119
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 61/84 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L + K+AGY+P T + L+++ +E KE SER A+A+GL++T PG LRI KNLR
Sbjct: 18 KLFRQMKEAGYVPDTNFALQNVAKEEKEHILCGHSERQAIAFGLLNTSPGTPLRIIKNLR 77
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH+ +K +S+I REI++RD
Sbjct: 78 VCGDCHSAMKYISNIAEREIVMRD 101
>gi|388458810|gb|AFK31271.1| hypothetical protein, partial [Oryza sativa Indica Group]
Length = 294
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 49/274 (17%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
ALE+ +++ G+ D ++ +L C + G+R+ N G+ P + ++
Sbjct: 15 ALELFHQMEAAGVAPDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMV 74
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG-----------------IVDL----- 110
G G +DE + + + D D+ L LG ++DL
Sbjct: 75 DLFGRAGQLDEAKKVIDEMPMDPDL-AVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNS 133
Query: 111 ------------YGRLQKIAEAREFI--RNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
GR ++ + R + RN+ +A V E + + G L P +
Sbjct: 134 GRYVLLANLLAGAGRWDEVGKVRRLMDERNVSKEAGRSVIEVDGEACEFRCGNLR-HPQA 192
Query: 157 ------SLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
+L + ++ + GY+P T L D+ +E KE SE+LA+A+GL+ P T
Sbjct: 193 REIYAMALDMVSRIRAEGYVPDTGEALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRET 252
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
LRI KNLR+C +CH K +S + REI+VRD++
Sbjct: 253 LRITKNLRVCRDCHEATKYVSRVFGREIVVRDRS 286
>gi|7799762|emb|CAA06831.1| DYW9 protein [Arabidopsis thaliana]
Length = 125
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 56/84 (66%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L K ++AGY P TE L D+++E +E SERLA+A+GLI+T PG +RI KNLR
Sbjct: 24 KLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLR 83
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S I R I+VRD
Sbjct: 84 VCLDCHTVTKLISKITERVIVVRD 107
>gi|361066295|gb|AEW07459.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
Length = 95
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%)
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
+ GY+P T +VL D+ QE K SE+LAVA+G+I+TPP +R+ KNLR+CG+CH+
Sbjct: 1 EEGYVPDTNFVLHDVGQEQKAHALHCHSEKLAVAFGIINTPPRTPIRVLKNLRVCGDCHS 60
Query: 226 FIKKLSSIENREIIVRD 242
IK +S + REII+RD
Sbjct: 61 VIKFISKVYEREIILRD 77
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 128/291 (43%), Gaps = 53/291 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----E 57
N+ + L + + A+ D++ + GI + + LL C L++ G ++ +
Sbjct: 393 NAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKD 452
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF---LGIVDLYGRL 114
+ G+ P + +I G G +DE E + + P + LG + G
Sbjct: 453 HHGIEPKGEHYSCIIDMYGRAGRLDEA----EKFIGEMPVKPNAYGWCSLLGACRMRGNK 508
Query: 115 QKIAEAREFIRNMQIDASSV------VWETLEKYAQTEPGLLLGE-------PSSSLRLS 161
+ A + + ++ D + V ++ +L ++ + L P S S
Sbjct: 509 ELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDS 568
Query: 162 NKK----------------------------KDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
NKK K+ GY+P T ++ +L+ AK++ Y S
Sbjct: 569 NKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHS 628
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
ER+AVA+ LIS P + + +KKNLRIC +CH+ +K +S +ENR+IIVRD +
Sbjct: 629 ERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRDNS 679
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 103/196 (52%), Gaps = 16/196 (8%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRD--YDINPTLEHFLGIVDLYGRLQKIA 118
++PN + +++AC G ++ G ES+TR ++ +++ + +++ Q+
Sbjct: 395 IQPNPVIWRSLVSACRAHGRLELG----ESITRSLLHEYPAHEANYIMLSNVFALTQRWK 450
Query: 119 EAREFIRNM------QIDASSVV---WETLEKYAQTEPGLLLGEPSSSLR-LSNKKKDAG 168
E E R M ++ S+V E E A E + + ++ + + G
Sbjct: 451 EKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDIYRMVEEMARELRRVG 510
Query: 169 YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIK 228
++ T VL DLD+E KE + SE+LA+A+ L+ TPPG +R+ KNLR+C +CH IK
Sbjct: 511 HIAATSEVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRVVKNLRVCSDCHAAIK 570
Query: 229 KLSSIENREIIVRDKT 244
+S + REI+VRD++
Sbjct: 571 CISQVYRREIVVRDRS 586
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEN---D 59
N+ + L + +V A+ V + ++ + + +I+ L M+ + EA + FE
Sbjct: 269 NALIDTLAKCGDVDGAVAVFEGMQQRSV-VSWTSVIDAL--AMEGRGKEAVRVFEEMKVA 325
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
GV P+ F+GV+TAC G VDEG +F+++ +Y I P +EH+ +VD++GR +
Sbjct: 326 GVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVER 385
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEP-SSSLRLSNKKKDAGYMPYTEYVLR 178
A EF+R M I + V+W +L + L LGE + SL +A Y+ +
Sbjct: 386 AMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVF-- 443
Query: 179 DLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
L Q KEK + R ++ I PG ++ + + GE H FI
Sbjct: 444 ALTQRWKEKSEIRRE----MSKRGIKKVPGCSI-----VELDGEVHEFI 483
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 40 LLNVCMDLKLLEAGKRFEN---DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
++ M L+A FE DGV+P + F+ V+TAC G VDEG+++F S+ RD+
Sbjct: 375 IMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFG 434
Query: 97 INPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
+ P LEH+ + DL GR ++ EA +FI NM + + VW TL + + L E
Sbjct: 435 VAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAE 491
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+ T VL D+D+E K SERLA+A+G+IST G T+R+ KN+R+C +CH I
Sbjct: 582 GYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAI 641
Query: 228 KKLSSIENREIIVRDKT 244
K ++ I REIIVRD +
Sbjct: 642 KFMAKIVGREIIVRDNS 658
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+ + K +GY P T VL D+++E KE SE+LA+A+GL+ TPPG +RI KNLR+
Sbjct: 506 MGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRV 565
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
C +CH+ K +S I +REII+RD+
Sbjct: 566 CSDCHSASKFISKIYDREIIMRDR 589
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 4/152 (2%)
Query: 40 LLNVCMDLKLLEAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
++ + M + EA FE + GV P+ F+G+++AC G V+ G ++F S+ + Y
Sbjct: 307 IVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYK 366
Query: 97 INPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
+ P +EH+ +VD+Y R + EA EF+RNM I+ + V+ TL + LGE +
Sbjct: 367 LVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKIT 426
Query: 157 SLRLSNKK-KDAGYMPYTEYVLRDLDQEAKEK 187
L + ++ ++ Y+ + + L E K K
Sbjct: 427 KLLMKHEPLHESNYVLLSNIYAKTLSWEKKTK 458
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 50/259 (19%)
Query: 33 DSPDIIE---LLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVITACGCFGAVDEG 84
+ PD++ +L C E G+ + N+ G+ P + ++T G G +D+
Sbjct: 389 EKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDA 448
Query: 85 FQHFESVTRDYDINPTLEHFLGIVDLYGR--LQKIA----------EAREFIRNMQIDAS 132
+ + + D LG ++G L ++A A ++ I AS
Sbjct: 449 YDIINQMPFEPD-GCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYAS 507
Query: 133 SVVWETLEKY--------AQTEPG------------LLLGEPSSSL---------RLSNK 163
+W+ + + + E G LL G+ S + L+ +
Sbjct: 508 KKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTME 567
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
+ G+ P T+YVL D++++ K+ + SE+LAVA GLIST G L++ KNLRICG+C
Sbjct: 568 MRRLGFAPSTDYVLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDC 627
Query: 224 HNFIKKLSSIENREIIVRD 242
H +K +SS E REI VRD
Sbjct: 628 HEAMKFISSFERREIYVRD 646
>gi|218201925|gb|EEC84352.1| hypothetical protein OsI_30875 [Oryza sativa Indica Group]
Length = 393
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 9/126 (7%)
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGL-LLGEPSSSLR-LSNKKKDAGYMPYTEYV 176
EA + R MQ E +E + T P ++ + L+ L+ + + G+ P T+YV
Sbjct: 242 EAVDLFREMQ-------SEGIEPNSVTIPSHPMMATITEKLKHLTVEMRRLGFAPSTDYV 294
Query: 177 LRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENR 236
L D++++ K+ + SE+LAVA GLIST G LR+ KNLRICG+CH +K +SS E R
Sbjct: 295 LHDVEEQDKDDILSVHSEKLAVALGLISTSRGTPLRVIKNLRICGDCHEAMKFISSFEGR 354
Query: 237 EIIVRD 242
EI VRD
Sbjct: 355 EIYVRD 360
>gi|77548549|gb|ABA91346.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 624
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 128/301 (42%), Gaps = 73/301 (24%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG----KRFE- 57
N+ L L +AAL + D++ G+ +D ++ ++ C L++ G R E
Sbjct: 322 NAMLHGLAVHGHGRAALSLFDRMHGEGVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEI 381
Query: 58 ------------------------NDG--------VRPNWSTFVGVITACGCFGAVDEGF 85
ND + PN + + +I ACG G ++ G
Sbjct: 382 EFGIEPSIEHYGCMVDMLSRAGRLNDAEKLIHGMPIVPNAAIYRSLIRACGIHGKLELGK 441
Query: 86 QHFESVTRDYDINPTLEHFLGIVDLYG---RLQKIAEAREFIRNMQIDAS---------S 133
+ + R + + + H L I + Y R +AR+ +++M ID S
Sbjct: 442 KMIAELMR-LEPDDSGNHVL-ISNFYATTNRWDDAKKARKEMKSMGIDKSPGSSFVDING 499
Query: 134 VVWETL----------EKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQE 183
V+ E L E YA E + + + G+ T L D+++E
Sbjct: 500 VLHEFLVGDKTHPASKEIYAMVE------------DIETRLSECGHRSSTSSALFDVEEE 547
Query: 184 AKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
K +Y SERLA+A+ LI++ PG +RI KNLR+C +CH K +S + REI++RD+
Sbjct: 548 DKADALSYHSERLAIAFALIASNPGAPIRIIKNLRVCADCHESAKLVSRVYGREIVMRDR 607
Query: 244 T 244
T
Sbjct: 608 T 608
>gi|190612661|gb|ACE80708.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 151
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 63/92 (68%)
Query: 151 LGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
+ E + L+ +++ AGY+P T++VL D+++E K + SE+LA+A+GL+ST G
Sbjct: 49 INEIHAELQRLSEQMGAGYVPDTQFVLHDVEEEKKVFRLCHHSEKLAIAFGLLSTVAGTP 108
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
LRI KNLR+C +CH K ++ IE REI+VRD
Sbjct: 109 LRIYKNLRVCVDCHTATKFIAKIEGREIVVRD 140
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 115/239 (48%), Gaps = 50/239 (20%)
Query: 35 PDIIELLNVCMDL-----KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFE 89
PD+ N +DL +L+EA +N V P+ +T+ ++ +C +G V+ G E
Sbjct: 466 PDVSHC-NCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELG----E 520
Query: 90 SVTRD-YDINP-TLEHFLGIVDLY---GRLQKIAEAREFIRNMQIDASSVVWETLEKYAQ 144
V ++ ++P ++ + ++Y G+ ++ R +R E+ +
Sbjct: 521 LVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMR--------------ERGIR 566
Query: 145 TEPG------------LLLGEPS---------SSLRLSNKKKDAGYMPYTEYVLRDLDQE 183
EPG L+ + S S ++ K K GY+P T VL++ + +
Sbjct: 567 KEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEGYIPDTRLVLKNKNMK 626
Query: 184 AKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
KE SE+LA+ YGL+ TPPG +R+ KNLR+C +CH K +S +E REIIVRD
Sbjct: 627 DKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGATKLISKVEGREIIVRD 685
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 87/183 (47%), Gaps = 10/183 (5%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE +R GV+P+ TFV V++AC G VDEG + ++T+ Y I P + H +VD
Sbjct: 417 LEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVD 476
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
L GR ++ EA+ FI NM +D W L +T + LGE + RL K+A
Sbjct: 477 LLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAA- 535
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKK 229
T +L ++ EA + + G I PGR+ + + + H+F+
Sbjct: 536 ---TYVLLSNIYAEAGKWDMVSWVRTMMRERG-IRKEPGRSW-----IEVDNKIHDFLVA 586
Query: 230 LSS 232
SS
Sbjct: 587 DSS 589
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP--TLEHFL--GIVDLYGRLQK 116
+RP+ S + ++ C G + G E + ++++P + H L ++ GR +
Sbjct: 489 MRPSISVWGALLGGCKMHGKTELGRIAAEKL---FELDPQDSGNHVLLSNMLASAGRWAE 545
Query: 117 IAEAREFIRNMQIDA----SSVVWETLEKYAQTEPGL--LLGEPSSSL-RLSNKKKDAGY 169
+ R+ ++N+ I S + W+ + Q + + E + L +L + + AGY
Sbjct: 546 ATDVRKEMKNVGIKKDPGRSWITWKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGY 605
Query: 170 MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKK 229
MP T+Y L DL++E KE SE+LA+A+GLI PPG +RI KNLRIC +CH K
Sbjct: 606 MPDTQYALYDLEEEEKESEVFQHSEKLALAFGLICIPPGIPIRIMKNLRICVDCHRAFKF 665
Query: 230 LSSIENREIIVRD 242
+S I REIIVRD
Sbjct: 666 ISGIAGREIIVRD 678
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
PN+ T V V+TAC G EG++ F+++ + I P +EH+ +VDL R A +
Sbjct: 423 PNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYK 482
Query: 123 FIRNMQIDASSVVWETL----EKYAQTEPGLLLGE 153
I+ M + S VW L + + +TE G + E
Sbjct: 483 IIQGMPMRPSISVWGALLGGCKMHGKTELGRIAAE 517
>gi|242067895|ref|XP_002449224.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
gi|241935067|gb|EES08212.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
Length = 570
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 51 EAGKRF---ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA K F +++GVRPN TF V+ ACG G V+EG +HF S+ DY ++PTLEH+ I
Sbjct: 409 EALKLFCLMKSEGVRPNSFTFTAVLVACGHSGLVNEGLKHFNSILSDYQMSPTLEHYACI 468
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
VD+ GR ++ EA E IR M + VW + L L E
Sbjct: 469 VDMLGRAGRLVEAYEIIRGMSLCPDKCVWGAFLGGCKLHSNLELAE 514
>gi|358357174|gb|AEU08427.1| pentatricopeptide repeat protein [Timmia megapolitana subsp.
bavarica]
Length = 152
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 57/83 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ + K GY+P T VL+++D+E KE SE+LA+A+GL+ TPPG+ +R+ KNLR+
Sbjct: 59 LAERIKAEGYIPDTRLVLQNMDEEDKELALCSHSEKLAIAFGLMRTPPGKPIRVYKNLRV 118
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH K +S + REI+ RD
Sbjct: 119 CSDCHTATKFISKVTRREIVARD 141
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 58/86 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L+ K +AGY P TE L D+++E KE SE+LA+A+GL+ST PG +RI KNLR
Sbjct: 686 KLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLR 745
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+C +CHN K +S + R I+VRD +
Sbjct: 746 VCLDCHNATKFISKVTQRLIVVRDAS 771
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE 122
P +TF+ V+ AC G V+EG++ F S+T DY INP +EH +VDL GR ++ EA E
Sbjct: 513 PTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFE 572
Query: 123 FIRNMQIDA-SSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLD 181
I A VW L L + +S +++GY +L +L
Sbjct: 573 LISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYY----VLLSNLH 628
Query: 182 QEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
K+ + + A + L+ T PG TL
Sbjct: 629 TSKKQYSEAAVVRQEAKSRKLVKT-PGYTL 657
Score = 43.1 bits (100), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 9/121 (7%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
VRPN T ++AC GA+ G + + + D+ P + ++D+Y + I+EA
Sbjct: 410 VRPNPITISSTLSACAQLGALSLG-KWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEA 468
Query: 121 REFIRNMQIDASSVVWETL-EKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRD 179
R M + + V W + Y L G+ + +L+L DA +P + L
Sbjct: 469 RRIFNTMD-NKNVVSWNAMIAGYG------LHGQGAEALKLYKDMLDAHLLPTSATFLSV 521
Query: 180 L 180
L
Sbjct: 522 L 522
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 47/272 (17%)
Query: 17 AALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGV 71
AALE ++ ++ + D + +L+ C + LL+ G+ + ++ G+ P + +
Sbjct: 456 AALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCM 515
Query: 72 ITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYG--RLQKIAEAREFIRNMQI 129
+ G G +D+ + + + + LG ++ L +I+ R Q
Sbjct: 516 VWLLGRGGHLDKAVKLIDEIPFQPSV-MVWRALLGACVIHNDIELGRISAQRVLEMEPQD 574
Query: 130 DASSVV----------WETL--------EKYAQTEPGLLLGEPSSSLR------------ 159
A+ V+ W+ + K + EPGL E ++
Sbjct: 575 KATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEV 634
Query: 160 ---------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
L K K AGY+P VL D++ E KE+ SERLA+++G+I TP G
Sbjct: 635 RVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSP 694
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KNLRIC +CH IK +S + REI+VRD
Sbjct: 695 IRIMKNLRICVDCHAAIKCISKVVQREIVVRD 726
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 41 LNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPT 100
L C L LE G + + V+P+ TFVGV++AC G +D+G +F S+ +D+ I P
Sbjct: 449 LRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPC 508
Query: 101 LEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRL 160
+EH+ +V L GR + +A + I + S +VW L + LG S+ L
Sbjct: 509 IEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVL 568
Query: 161 SNKKKDAGYMPYTEYVLRDLDQEAK 185
+ +D T +L ++ AK
Sbjct: 569 EMEPQDKA----THVLLSNMYATAK 589
>gi|383135477|gb|AFG48749.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
Length = 95
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 56/77 (72%)
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
+ GY+P T +VL D+ +E K SE+LAVA+G+I+TPP ++R+ KNLR+CG+CH+
Sbjct: 1 EEGYVPDTNFVLHDVGEEQKAHALHCHSEKLAVAFGIINTPPRTSIRVLKNLRVCGDCHS 60
Query: 226 FIKKLSSIENREIIVRD 242
IK +S + REII+RD
Sbjct: 61 VIKFISKVYEREIILRD 77
>gi|297744462|emb|CBI37724.3| unnamed protein product [Vitis vinifera]
Length = 339
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 22/194 (11%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+GVRPN T+ V+ AC + + + D+ V + Q+
Sbjct: 140 EGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLESDV---------FVRSFESFQEDE 190
Query: 119 EAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPSSS------LRLSN---KKKDAG 168
E+ + + N I + W ++K +LG+ S RL++ + G
Sbjct: 191 ESWKTMTNRGIRKTPGCSWIEVDKQIHV---FILGDTSHPKIEEIVQRLNDLIERVMGVG 247
Query: 169 YMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIK 228
Y+P T +VL+DL+ E KE Y SE+LA+ +GL++ +T+RI+KNLRICG+CH F K
Sbjct: 248 YVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLRICGDCHVFAK 307
Query: 229 KLSSIENREIIVRD 242
+S +E+R I++RD
Sbjct: 308 VVSRMEHRSIVIRD 321
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 119/280 (42%), Gaps = 61/280 (21%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG-----KRFENDGVRPNWSTFVGVI 72
A+E+ L G S + +LN C L E G ++ G+ P + ++
Sbjct: 334 AVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMV 393
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINP---TLEHFLGIVDLYGRLQ------------KI 117
G G ++E + S R + P L L ++G L+ K
Sbjct: 394 DLLGRLGRLEEAY----SFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKN 449
Query: 118 AEAREFIRNMQIDASSVVWETL--------EKYAQTEPG------------LLLGEPSSS 157
A++ +I +SS W+ E+ + EPG LLG+
Sbjct: 450 ADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGD---- 505
Query: 158 LRLSNKKKD-------------AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIS 204
LR K+K GY P TE VL D+++ KE SERLA+ YGLIS
Sbjct: 506 LRHPQKEKIYKKLEELNQILRLEGYTPATEVVLHDIEKSEKEWALAIHSERLAICYGLIS 565
Query: 205 TPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
T P TLR+ KNLR+C +CH IK +S+I R+I+VRD+
Sbjct: 566 TKPLTTLRVVKNLRVCNDCHLTIKLISNITRRKIVVRDRN 605
>gi|358357220|gb|AEU08450.1| pentatricopeptide repeat protein [Takakia lepidozioides]
Length = 150
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS + K+AGYMP T L D++Q KE + SE+LA+A+GLISTPPG +RI KNL
Sbjct: 58 RLSGQMKEAGYMPDTCLELHDVEQ--KEFFLCHHSEKLAIAFGLISTPPGMPVRIIKNLG 115
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG CH K +S I R I++RD
Sbjct: 116 VCGNCHTATKFISKIVGRTIVIRD 139
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 121/270 (44%), Gaps = 45/270 (16%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
A+ + +++++G+ DS + +L+ C LL+ G+ + E + P FV ++
Sbjct: 391 AVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMV 450
Query: 73 TACGCFGAVDEGFQHFESVTRD-----------------------------YDINPTLE- 102
G G VDE + + + + + + P
Sbjct: 451 DLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSG 510
Query: 103 HFLGIVDLY---GRLQKIAEAREFIRNMQIDASSVVWE-TLEKYAQTEPGLLLGEPSSS- 157
+++ + ++Y GR + + R ++ I V L+ T P S
Sbjct: 511 YYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQ 570
Query: 158 ----LRLS-NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
L +S K K+AGY+P T+ L D+++E KE SE+LA+A+ +++T PG +R
Sbjct: 571 IYEELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIR 630
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRD 242
I KNLR+CG+CH K +S I REI +RD
Sbjct: 631 ITKNLRVCGDCHIAAKLISKIVGREITIRD 660
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 121/285 (42%), Gaps = 69/285 (24%)
Query: 17 AALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK--------------RFENDG-- 60
AA ++ +++ IGI D + LL+ C +L+ G+ + E+ G
Sbjct: 453 AAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCM 512
Query: 61 ---------------------VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP 99
+ P+ + ++ AC G V+ G +++ + NP
Sbjct: 513 IDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENP 572
Query: 100 TLEHFLG-IVDLYGRLQKIAEAREFIRN---------MQIDASSVVWETL---------- 139
L I GR ++A+ R + + I+ SVV E +
Sbjct: 573 GCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR 632
Query: 140 EKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVA 199
E Y E +L E AG++P T VL+++++E KE + SE+LA+A
Sbjct: 633 EIYGMLEEMEVLLE------------KAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 680
Query: 200 YGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
+GLIST PG L I KNLR+C CH K +S I REII RD+T
Sbjct: 681 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRT 725
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 127/273 (46%), Gaps = 48/273 (17%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
K A+E+ +++K+ G + + +L+ C L++ G+ + E+ G+ P +
Sbjct: 612 KVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGT 671
Query: 71 VITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQ-- 128
++ G G + E + + + + I+ LG L+ ++ E+ + I ++
Sbjct: 672 MVDLLGRAGKLHEAWSFIQKMPMEPGIS-VYGAMLGACKLHKNVELAEESAQRIFELEPE 730
Query: 129 ----------IDASSVVWETL--------EKYAQTEPGLLLGEPSSSL------------ 158
I A++ +W+ + +K Q PG + + + +
Sbjct: 731 EGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQ 790
Query: 159 ---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
+L + K GY+P T+ + D++ + K + SE+LA+AYGLI T PG
Sbjct: 791 AKDIYARLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGT 849
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
T++IKKNLR+C +CHN K +S + REII+RD
Sbjct: 850 TIQIKKNLRVCKDCHNATKLISLVTGREIIMRD 882
>gi|190612861|gb|ACE80808.1| pentatricopeptide repeat protein [Pinus nigra]
Length = 153
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQ-TYRSERLAVAYGLISTPPGRTLRIKKNL 217
RL + + AGY+ T +VL D+ +E KE+ + SE+LA+A+GL++TPPG T+R+ KNL
Sbjct: 58 RLPLEMEMAGYVANTGFVLNDVKEEEKEQILLNHHSEKLAIAFGLLNTPPGTTIRVVKNL 117
Query: 218 RICGECHNFIKKLSSIENREIIVRD 242
R+CG+CH K +S I REI+VRD
Sbjct: 118 RVCGDCHTATKFISKIVAREIVVRD 142
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 120/257 (46%), Gaps = 45/257 (17%)
Query: 1 DLNSELKHL-CREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND 59
D+ SE++H C ++D L G+ ++ ++IE G R D
Sbjct: 397 DIESEMEHYGC----------MVDLLSRAGLVQEAVELIE-------------GMRIPPD 433
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLE-HFLGIVDLYGRLQKIA 118
V W T +++AC G VD G + +++P + +++ + +Y + +K
Sbjct: 434 PVL--WGT---ILSACKRHGLVDLGITVGNKLI---ELDPAHDGYYVLLASIYAKAKKWD 485
Query: 119 EAREFIRNM--QIDASSVVWETLEKYAQTEPGLLLGEPSS--SLRLSN-------KKKDA 167
E R+ + M + + S W +E + L+G+ + S R+ N + +A
Sbjct: 486 EVRKVRKLMSNRGTSKSAGWSLMEAHGIVHK-FLVGDMNHKDSARIYNMLCTINRRLAEA 544
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+P VL D+ E K SERLA+AYG I G +RI KNL +CG+CH F
Sbjct: 545 GYVPDVSSVLHDIGDEEKVHAIKVHSERLAIAYGFIVVEAGSPIRIVKNLSVCGDCHEFS 604
Query: 228 KKLSSIENREIIVRDKT 244
K ++ + REI+VRD +
Sbjct: 605 KMVTKVFGREIVVRDGS 621
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
V AA EV D + +F + I L + ++ ++F ++G P TFVGV+
Sbjct: 315 SVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLN 374
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
AC G VDEG ++F+ + YDI +EH+ +VDL R + EA E I M+I
Sbjct: 375 ACSRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDP 434
Query: 134 VVWETL----EKYAQTEPGLLLG 152
V+W T+ +++ + G+ +G
Sbjct: 435 VLWGTILSACKRHGLVDLGITVG 457
>gi|357119982|ref|XP_003561711.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Brachypodium distachyon]
Length = 555
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 57/85 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS K K GY P TE V++D+ E +E+ T+ SE+LAVAY ++ T PG + + KNL+
Sbjct: 455 LSKKAKAEGYSPSTELVMKDVSHEEREENLTFHSEKLAVAYSVLKTGPGTEIMVSKNLQT 514
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
CG+CH +IK +S + R II+RD+
Sbjct: 515 CGDCHEWIKIISKVLCRVIIMRDRA 539
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
R E+ GV P+ TFV ++TAC G V+E Q+FE++T Y I P +EH+ +VD R
Sbjct: 277 RMEHAGVVPDGVTFVALLTACSHCGMVEEARQYFEAMTTKYYITPKVEHYGAMVDTLSRA 336
Query: 115 QKIAEAREFIRNMQIDASSVVWETL----EKYAQTEPG 148
+ EA +R+M + +V+W L ++ QT+ G
Sbjct: 337 GLLDEAYNLVRSMVVKPDAVIWRALLSACRRHHQTKLG 374
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG- 106
KL +A K E + P S + ++T C G + V+ ++ L L
Sbjct: 376 KLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSN 435
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDA-SSVVWETLEKYAQTEPGLLLGEPSSSL------- 158
GR ++ A+AR+ +R+ I + + W T G+ S +
Sbjct: 436 AYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHT---FAAGDRSHAKSVEIYDK 492
Query: 159 --RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKN 216
L + AGY+ T +VL+++D E K + Y SERLA+A+G I+ P G+ +R+ KN
Sbjct: 493 LDELGEEMDKAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKN 552
Query: 217 LRICGECHNFIKKLSSIENREIIVRD 242
LR+CG+CH IK +S R IIVRD
Sbjct: 553 LRVCGDCHTAIKFISKCTGRVIIVRD 578
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++ N+ TF+ V+ AC G V++G +FE + +DY I P +H+ +VDL GR K+ +
Sbjct: 321 GMKANFITFLCVLYACSHAGLVEKGKYYFE-LMKDYGIEPGTQHYSTMVDLLGRAGKLND 379
Query: 120 AREFIRNMQIDASSVVWETL 139
A + I M ++ + VW L
Sbjct: 380 AVKLIEEMPMEPTESVWGAL 399
>gi|367062898|gb|AEX11731.1| hypothetical protein 0_16763_01 [Pinus taeda]
gi|367062902|gb|AEX11733.1| hypothetical protein 0_16763_01 [Pinus taeda]
gi|367062904|gb|AEX11734.1| hypothetical protein 0_16763_01 [Pinus taeda]
gi|367062906|gb|AEX11735.1| hypothetical protein 0_16763_01 [Pinus taeda]
gi|367062910|gb|AEX11737.1| hypothetical protein 0_16763_01 [Pinus taeda]
gi|367062914|gb|AEX11739.1| hypothetical protein 0_16763_01 [Pinus taeda]
gi|367062920|gb|AEX11742.1| hypothetical protein 0_16763_01 [Pinus taeda]
Length = 119
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 61/84 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L + K+AGY+P T + L+++ +E KE SER A+A+GL++T PG LRI KNLR
Sbjct: 18 KLFRQIKEAGYVPDTNFALQNVAKEEKEHILCGHSERQAIAFGLLNTSPGTPLRIIKNLR 77
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH+ +K +S+I REI++RD
Sbjct: 78 VCGDCHSAMKYISNIAEREIVMRD 101
>gi|294462449|gb|ADE76772.1| unknown [Picea sitchensis]
Length = 232
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
+ L+ ++ ++ PN TFVGV++AC G V EG Q+F S++ DY I P +EH+ +
Sbjct: 114 QALDLFEQMKHSDTSPNQVTFVGVLSACCHAGLVSEGRQYFNSMSVDYHITPVMEHYCCM 173
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSN 162
VDL GR + EA +FI M I+ + VW++L +T + LGE + RLSN
Sbjct: 174 VDLLGRTGCLDEAHDFINKMPIEPDTAVWQSLLGACRTHANVDLGEKVAE-RLSN 227
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 60/86 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+S++ K GY P T + D+D+E KE+ SE+LA+A+GLI+ P + I+KNLR+
Sbjct: 644 ISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRV 703
Query: 220 CGECHNFIKKLSSIENREIIVRDKTT 245
C +CH+ IK +S + NREIIVRD+++
Sbjct: 704 CEDCHSAIKLISRLWNREIIVRDRSS 729
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 54/90 (60%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE + DG +PN +++ V+TAC ++EG +F+ + Y+I+P +EH+ ++D
Sbjct: 458 LEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMID 517
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
L GR + EA + ++ M I ++V+W ++
Sbjct: 518 LLGRSGLLDEAMDLVKTMPIQPNAVIWASI 547
>gi|190612867|gb|ACE80811.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + ++ GY+P T +VL D+ +E K + SE+LA+A+GL+ST PG LRI KNLR
Sbjct: 58 RLFKEMEEVGYVPDTRFVLHDVVEEEKVFRLCHHSEKLAIAFGLVSTAPGTPLRIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ +E REI+VRD
Sbjct: 118 VCLDCHTATKFITMVEGREIVVRD 141
>gi|190612655|gb|ACE80705.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS K+AGY P T +VL D+++E K + SE+LA+A+GL+ST PG L+I KNLR
Sbjct: 58 RLSELMKEAGYEPDTRFVLHDVEEEEKVFRLGHHSEKLAIAFGLLSTVPGTRLQIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++++ REI+ RD
Sbjct: 118 VCVDCHTATKFMATVAGREIVARD 141
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 61/112 (54%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
E GV PN+ TFV V++AC G VDEG HF S+ Y + P EH+ +V+L+GR K
Sbjct: 634 EGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGK 693
Query: 117 IAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
+ A+EFI M I+ + +W +L + +G ++ + L D+G
Sbjct: 694 LHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSG 745
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 53/75 (70%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+P T VLRD+++ K K SERLA+A+GL+STP G ++I KNLR+C +CHN
Sbjct: 729 GYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVT 788
Query: 228 KKLSSIENREIIVRD 242
K +S I REIIVRD
Sbjct: 789 KYISKIVQREIIVRD 803
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
R + ++PN +TFV ++TAC G V+EG F S+ RD+D+ P +H+ +VDL+ R
Sbjct: 539 SRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSR 598
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYT 173
++ EA E ++ M S+ V E L +T +G ++++++ Y+
Sbjct: 599 AGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMG-----IQIADRLISLDYLNSG 653
Query: 174 EYV-LRDLDQEAKE 186
YV L ++ EA++
Sbjct: 654 IYVMLSNIYAEARK 667
>gi|388458806|gb|AFK31269.1| hypothetical protein, partial [Oryza sativa Indica Group]
Length = 294
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 119/274 (43%), Gaps = 49/274 (17%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
ALE+ +++ G+ D ++ +L C + G+R+ N G+ P + ++
Sbjct: 15 ALELFHQMEAAGVAPDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMV 74
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYG-------------------- 112
G G +DE + + + D D+ L LG ++G
Sbjct: 75 DLFGRAGQLDEAKKVIDEMPMDPDL-AVLGALLGACKIHGDVDLGEAIGWRVIGLDPDNS 133
Query: 113 --------------RLQKIAEAREFI--RNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
R ++ + R + RN+ +A V E + + G L P +
Sbjct: 134 GRYVLLANLLAGAGRWDEVGKVRRLMDERNVSKEAGRSVIEVDGEACEFRCGNLR-HPQA 192
Query: 157 ------SLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
+L + ++ + GY+P T L D+ +E KE SE+LA+A+GL+ P T
Sbjct: 193 REIYAMALDMVSRIRAEGYVPDTGEALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRET 252
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
LRI KNLR+C +CH K +S + REI+VRD++
Sbjct: 253 LRITKNLRVCRDCHEATKYVSRVFGREIVVRDRS 286
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 14/145 (9%)
Query: 2 LNSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKL-------LEAGK 54
+N+ + R +V ++ E+ DK+ + D+I + M + LE
Sbjct: 451 MNAIMHMYARCGDVLSSREIFDKMA-------AKDVISWNTMIMGYAIHGQGRSALEMFS 503
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ +G+RPN STFV V+TAC G DEG+ F S+ RDY + P +EH+ + DL GR
Sbjct: 504 EMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRA 563
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
+ E +FI NM ID + VW +L
Sbjct: 564 GDLKEVMQFIENMPIDPTFRVWGSL 588
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREII 239
LD +P + S RLAV +GLIST + +KKN+RIC +CH+ +K +S R I+
Sbjct: 709 LDSRRTTEPNKH-SVRLAVVFGLISTEARTPILVKKNVRICNDCHHALKLISKYSGRRIV 767
Query: 240 VRD 242
V D
Sbjct: 768 VGD 770
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 54/77 (70%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+P T V+ DL++ KE SERLAVA+GLI +PPG +R+ KNLR+C +CH +
Sbjct: 600 GYVPDTSSVMHDLEESEKEHHLFLHSERLAVAFGLIKSPPGSVIRVVKNLRVCVDCHTVM 659
Query: 228 KKLSSIENREIIVRDKT 244
K +S I +R+I+VRD +
Sbjct: 660 KLISEITHRKIVVRDSS 676
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G +PN TFVG+I AC G V +G Q FES+ +Y I P L+H+ +DL R + E
Sbjct: 416 GAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLE 475
Query: 120 AREFIRNMQIDASSVVWETL 139
A E + M + W L
Sbjct: 476 AEELMTTMPYEPDEATWGAL 495
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+GVRP TFVGV+ AC G VD+G ++FES+ R Y + P ++H+ +VDL R +
Sbjct: 1123 EGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLG 1182
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
A EFI+ M +D VVW L +Q L L E ++ L ++G
Sbjct: 1183 RAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATKKLLETDPSNSG 1232
>gi|297743485|emb|CBI36352.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 57/85 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+S K AGY P T V D+ +E KE SE+LA+A+GLIS+ PG T+RI KNLR+
Sbjct: 505 MSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRM 564
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
C +CH K +S + NRE+IVRD+T
Sbjct: 565 CVDCHYVAKLVSKVYNREVIVRDRT 589
>gi|190612863|gb|ACE80809.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ K+AGY+P T +VL D+ +E K + SE+LA+A+GLIST P LRI KNLR
Sbjct: 58 RLNVLMKEAGYVPDTRFVLHDMMEEEKVVHLCHHSEKLAIAFGLISTAPSTPLRIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ I +REI+VRD
Sbjct: 118 VCIDCHTATKFIAKIVDREIVVRD 141
>gi|414883628|tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays]
Length = 635
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 119/255 (46%), Gaps = 45/255 (17%)
Query: 1 DLNSELKHL-CREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND 59
D+ SE++H C ++D L G+ ++ ++IE G R D
Sbjct: 397 DIESEMEHYGC----------MVDLLSRAGLVQEAVELIE-------------GMRIPPD 433
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLE-HFLGIVDLYGRLQKIA 118
V W T +++AC G VD G + +++P + +++ + +Y + +K
Sbjct: 434 PVL--WGT---ILSACKRHGLVDLGITVGNKLI---ELDPAHDGYYVLLASIYAKAKKWD 485
Query: 119 EAREFIRNM--QIDASSVVWETLEKYAQTEPGLLLGEPSS--SLRLSN-------KKKDA 167
E R+ + M + + S W +E + L+G+ + S R+ N + +A
Sbjct: 486 EVRKVRKLMSNRGTSKSAGWSLMEAHGIVHK-FLVGDMNHKDSARIYNMLCTINRRLAEA 544
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+P VL D+ E K SERLA+AYG I G +RI KNL +CG+CH F
Sbjct: 545 GYVPDVSSVLHDIGDEEKVHAIKVHSERLAIAYGFIVVEAGSPIRIVKNLSVCGDCHEFS 604
Query: 228 KKLSSIENREIIVRD 242
K ++ + REI+VRD
Sbjct: 605 KMVTKVFGREIVVRD 619
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 65/126 (51%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
V AA EV D + +F + I L + ++ ++F ++G P TFVGV+
Sbjct: 315 SVAAAKEVFDAMPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLN 374
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
AC G VDEG ++F+ + YDI +EH+ +VDL R + EA E I M+I
Sbjct: 375 ACSRTGLVDEGRRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDP 434
Query: 134 VVWETL 139
V+W T+
Sbjct: 435 VLWGTI 440
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 56/83 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ K +DAGY+P VL D+ + KE+ SERLA+AYGLI TP ++RI KNLRI
Sbjct: 711 LNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRI 770
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH +K +S + REI++RD
Sbjct: 771 CIDCHTVMKLISKVVQREIVIRD 793
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%)
Query: 45 MDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF 104
M ++ L ++ +PN TFVGV++AC G + +G HFES+++DYDI P +EH+
Sbjct: 520 MSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHY 579
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
+V L GRL + EA + I + S +VW L
Sbjct: 580 TCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRAL 614
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 122/295 (41%), Gaps = 79/295 (26%)
Query: 24 KLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACG------- 76
K++N+G++ + +I + E + E GV+PN+ TF+ ++ AC
Sbjct: 273 KVRNLGMW--NAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEK 330
Query: 77 ---CFG-----AVDEGFQHFES----------------VTRDYDINPTLEHFLGIVDLYG 112
CFG ++ G QH+ + V ++ + PT E G +
Sbjct: 331 GEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPT-ESVWGALLTGC 389
Query: 113 RLQKIAEAREFIRNMQIDASSVV----------------WETL--------EKYAQTEPG 148
R+ E F+ + + +V WE ++ + E G
Sbjct: 390 RIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARARKMMRDQGIKKETG 449
Query: 149 LLLGEPSSSLR---------------------LSNKKKDAGYMPYTEYVLRDLDQEAKEK 187
L E + + L + AGY+ T +VL+++D + K +
Sbjct: 450 LSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTSFVLKEVDGDEKSQ 509
Query: 188 PQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
Y SERLA+A+GLI+ PP +R+ KNLR+CG+CH IK +S R IIVRD
Sbjct: 510 TIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRD 564
>gi|383157262|gb|AFG60954.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
gi|383157264|gb|AFG60955.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
gi|383157270|gb|AFG60958.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
gi|383157272|gb|AFG60959.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
gi|383157282|gb|AFG60964.1| Pinus taeda anonymous locus 0_6409_02 genomic sequence
Length = 149
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 58/83 (69%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K+AGY+P T VL+D+++E KE SE+LA+A+G+I+T PG +RI KNL +
Sbjct: 49 LYGQMKEAGYVPKTNPVLQDVEEEMKETVLFSHSEKLAIAFGVINTSPGNPIRIVKNLHM 108
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CHN IK +S I R IIVRD
Sbjct: 109 CTDCHNAIKFISKIVGRVIIVRD 131
>gi|190612885|gb|ACE80820.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 56/84 (66%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL + GY P T ++L D+++E K + SE+LA+A+GL +TPPG LRI KNLR
Sbjct: 58 RLYEQMAAVGYEPDTSFLLHDVEEEDKVFRLVHHSEKLAIAFGLANTPPGTPLRIHKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH K ++ I R+IIVRD
Sbjct: 118 VCGDCHTVTKFITKIVGRKIIVRD 141
>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
Length = 653
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 161 SNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRIC 220
S K++ GY+P T V D+ + KE+ + SE++A+ +GLI++PPG TLRI KNLR+C
Sbjct: 554 SRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVC 613
Query: 221 GECHNFIKKLSSIENREIIVRDKT 244
+CH K S I R IIVRD T
Sbjct: 614 SDCHTVGKLASKITGRRIIVRDGT 637
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ N T V+ AC G + EG +F +++D+ I E+ +G +DL GR + E
Sbjct: 376 GIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKE 435
Query: 120 AREFIRNMQIDASSVVWETL 139
A + M S V TL
Sbjct: 436 AEHVLHTMPFKVSFVALVTL 455
>gi|190612659|gb|ACE80707.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 151 LGEPSSSLR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
+G + LR LS K ++AGY+P T Y L D D + K Y SE+LA+ +GLIST G
Sbjct: 49 IGRIHAELRKLSGKMEEAGYVPDTRYSLHDGDDDEKIAHVLYHSEKLAIGFGLISTVSGT 108
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
LRI KNLR+C +CH K ++ + REIIVRD
Sbjct: 109 PLRIYKNLRVCIDCHTATKVMTKVVGREIIVRD 141
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 57/83 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ K +AGY+ T V D+D+E KE SE+LA+A+G+++T PG T+ + KNLR+
Sbjct: 559 LNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRV 618
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CHN IK +S I +RE +VRD
Sbjct: 619 CSDCHNVIKLISKIVDREFVVRD 641
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
Query: 10 CREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFV 69
C+ V+ A + D++KN + + I K LE + GVRPN+ TFV
Sbjct: 333 CKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392
Query: 70 GVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQI 129
V+ AC G EG++ F ++ + + P LEH+ +VDL GR + +A + I+ M++
Sbjct: 393 SVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKM 452
Query: 130 DASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQ 189
S++W +L + + L E S + + GY ++ D A
Sbjct: 453 KPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYAD----AGRWKD 508
Query: 190 TYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
R + GL+ PPG +L L + GE H F+
Sbjct: 509 VERVRMIMKNRGLVK-PPGFSL-----LELNGEVHVFL 540
>gi|218186365|gb|EEC68792.1| hypothetical protein OsI_37341 [Oryza sativa Indica Group]
Length = 960
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 53/291 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG--------- 53
N+ L L +AAL ++D++ G+ +D ++ ++ C L++ G
Sbjct: 658 NAMLHGLAVHGHGRAALSLLDRMHGAGVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEI 717
Query: 54 -----KRFENDG-----------------------VRPNWSTFVGVITACGCFGAVDEGF 85
R E+ G + PN + + +I ACG G ++ G
Sbjct: 718 EFGIEPRIEHYGCMIDMLSRAGQLNNAEKLIHEMLIVPNAAIYRSLIRACGIHGKLELGE 777
Query: 86 QHFESVTRDYDINPTLEHFLGIVDLYGRLQK---IAEAREFIRNMQIDASSVVWETLEKY 142
+ + R + + + H L I + Y R + +AR+ +++M ID + +L
Sbjct: 778 KMIAELMR-LEPDDSGNHVL-ISNFYARTNRWEDAKKARKEMKSMGIDKNPG--SSLVDI 833
Query: 143 AQTEPGLLLGE---PSSSL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
L+G+ P+S + + + G T L D+++E K +Y S
Sbjct: 834 NGVLHEFLVGDKTHPASKEIYTMVEEIETRLIECGRRSSTSSALFDVEEEDKADTLSYHS 893
Query: 194 ERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
ERLA+A+ LI++ PG +RI KNLR+C +CH K +S + REI++RD+T
Sbjct: 894 ERLAIAFALIASNPGAPIRIIKNLRVCADCHESAKLVSRVYGREIVMRDRT 944
>gi|358357158|gb|AEU08419.1| pentatricopeptide repeat protein [Atrichum undulatum]
Length = 152
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 56/84 (66%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL+ + K GY+P T VL ++D+E KE+ SE+LA+AYGLI P G+ +R+ KNLR
Sbjct: 58 RLTERIKAEGYIPDTRLVLENIDEEGKERALFSHSEKLAIAYGLIRIPDGKPIRVYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S + REI+ RD
Sbjct: 118 VCPDCHTATKFISKVTGREIVARD 141
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 68/109 (62%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K LEA + ++G+ P+ +TF+GV++AC G V+EG + F+S+++ Y INP++EH+ +
Sbjct: 438 KALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACM 497
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
VD+ GR K E + FI M + S++WET+ + + GE ++
Sbjct: 498 VDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAA 546
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 124/274 (45%), Gaps = 53/274 (19%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK-RFEN----DGVRPNWSTFVGVI 72
ALE + + GI D I +L+ C + L+E GK RF++ G+ P+ + ++
Sbjct: 439 ALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMV 498
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINP---TLEHFLGIVDLYGRLQKIAEAREFIRNMQ- 128
G G +E + + ++ P E LG L+G + +A + + M+
Sbjct: 499 DILGRAGKFNE----VKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEP 554
Query: 129 -IDASSVV----------WETL--------EKYAQTEPGLLLGEPSSSL----------- 158
+D+S ++ W+ + + + EPG E +
Sbjct: 555 MMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHP 614
Query: 159 ----------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPG 208
+L GY+P TE VL ++ + K + Y SERLA+++ L+ST
Sbjct: 615 KIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAV 674
Query: 209 RTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+ +RI KNLRIC +CH+F+K +S I N+EI+VRD
Sbjct: 675 KPIRIFKNLRICEDCHDFMKLISDITNQEIVVRD 708
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%)
Query: 163 KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGE 222
K K++GY+P VL D+D+E KEK SE+LA+A+GLIST G LR+ KNLRIC +
Sbjct: 489 KFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVD 548
Query: 223 CHNFIKKLSSIENREIIVRDKT 244
CHNF K +S + R++ +RDK
Sbjct: 549 CHNFAKFVSKVYGRQVSIRDKN 570
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD-INPTLEHFLGIVDLYGRLQ 115
E + V+P+ TF+ V++ C G D+G + F+ + D I +EH+ ++DL GR
Sbjct: 306 EENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAG 365
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEY 175
++ EA E I+ M + ++ +W +L + +GE L + ++AG Y
Sbjct: 366 RVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAG-----NY 420
Query: 176 VLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
V+ + + + R+ R + + PGR+
Sbjct: 421 VILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRS 455
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 45 MDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTR-DYDINPTLEH 103
+D + LE R + +G+ N+ T+ ++TA A+D G Q V R + L++
Sbjct: 192 LDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQN 251
Query: 104 FLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWET-LEKYAQTEPGLLLGEPSSSLRLSN 162
L +D+Y + + AR+ NM + + + W L Y++ G+ + + +R N
Sbjct: 252 SL--IDMYSKCGNLNYARKIFNNMPVR-TVISWNAMLVGYSKHGKGIEVVKLFKLMREEN 308
Query: 163 KKK 165
K K
Sbjct: 309 KVK 311
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 114/273 (41%), Gaps = 78/273 (28%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESV-TRDYDINPTLEHF---- 104
+EA G+ P T G+++AC G V EG F+ + + ++ I P L H+
Sbjct: 303 IEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVV 362
Query: 105 -------------------------------LGIVDLYGRLQ------------KIAEAR 121
LG ++G ++ K EA
Sbjct: 363 DLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAG 422
Query: 122 EFIRNMQIDASSVVWETL--------EKYAQTEPGLLLGEPSSSLR-------------- 159
+++ + ++ WE + EK T+PG E ++
Sbjct: 423 DYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEE 482
Query: 160 -------LSNKKKDAGYMPYTEYVLRDLD-QEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
++ + K AGY+ L +L+ +E K Y SE+LA+A+G++ TPPG T+
Sbjct: 483 IYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTI 542
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
R+ KNLR C +CHNF K +S + +R +IVRD++
Sbjct: 543 RVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRS 575
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 121/292 (41%), Gaps = 83/292 (28%)
Query: 32 LDSPDIIE--------LLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDE 83
+ S DII +L+ C D L+ + GV+P+ TF+ +I A G VD+
Sbjct: 589 ISSKDIISWNSLIAGYVLHGCSD-SALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVDK 647
Query: 84 GFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYA 143
G Q F S+ DY I P LEH ++DL GR K+ EA EFI +M I+ S +W L +
Sbjct: 648 GKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALLTAS 707
Query: 144 QTEPGLLLG----------EPS---------------------SSLRLSNKKK------- 165
+ + L EPS S LR S K+
Sbjct: 708 KIHGNIGLAIRAGECLLELEPSNFSIHQQILQMYALSGKFEDVSKLRKSEKRSETKQPLG 767
Query: 166 ---------------DAGYMPYTEYVLRDLDQEAKEKPQTYRSERL-------------- 196
D PY +++ ++ A++ + +RL
Sbjct: 768 CSWIEAKNIVHTFVADDRSRPYFDFLHSWIENVARKVKAPDQHDRLFIEEEEKEEIGGVH 827
Query: 197 ----AVAYGLI--STPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
A+A+ LI S P R++RI KNLR+CG+CH K LS + + EI + D
Sbjct: 828 SEKLALAFALIDPSCAP-RSVRIVKNLRMCGDCHGTAKFLSMLYSCEIYLSD 878
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L + ++AGY+P T+ VL +++E KE+ SE+LA+A+GLI+TPPG L I KNLR
Sbjct: 461 KLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLR 520
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ I R I+VRD
Sbjct: 521 VCSDCHAATKVIAKIMRRRIVVRD 544
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE K +G+ + +TF+ V+ AC G + E + F S+ DY I PT H+ +D
Sbjct: 276 LELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALD 335
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
GR ++ +A E I +M ++ W+TL
Sbjct: 336 TIGRAGRLQDAEELIHSMPFHPETLTWKTL 365
>gi|298205132|emb|CBI40653.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L N+ K AGYMP T V D++ KE+ SE+LA+A+ L++T PG T+ ++KNLR+
Sbjct: 498 LGNRIKAAGYMPDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRV 556
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN K +S + REIIVRD
Sbjct: 557 CGDCHNATKYISLVTKREIIVRD 579
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 60/83 (72%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+ K + AGY+P T++VL+D+DQE KE+ SE+LAVA+G+++ ++R+ KNLRI
Sbjct: 587 MGEKMRIAGYLPNTDFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRI 646
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN IK ++ I +IIVRD
Sbjct: 647 CGDCHNAIKFMAKIVGVKIIVRD 669
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 10/170 (5%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+ GVRPN TF GV++ C VDEG F+S++RD+ + P +H +VD+ R ++
Sbjct: 409 DSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRL 468
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVL 177
EA EFI+ M I+ ++ W L + + LG +++ RL + D P +L
Sbjct: 469 EEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAAN-RLFEIESDN---PGNYVLL 524
Query: 178 RDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
++ AK + + +L G+ P ++++ + H F+
Sbjct: 525 SNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRV------HTFV 568
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 55/83 (66%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K K AGY+P VL D++ E KE+ SERLA+++G+I TP G +RI KNLRI
Sbjct: 687 LHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRI 746
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH IK +S + REI+VRD
Sbjct: 747 CVDCHAAIKCISKVVQREIVVRD 769
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
AC G +D+G +F S+ +D+ I P +EH+ +V L GR + +A + I + S
Sbjct: 525 ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSV 584
Query: 134 VVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAK 185
+VW L + LG S+ L + +D T +L ++ AK
Sbjct: 585 MVWRALLGACVIHNDIELGRISAQHVLEMEPQDKA----THVLLSNMYATAK 632
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+G++PN+ TFV V++AC G V++G HF S+ + I P EH+ +V L GR K+
Sbjct: 536 EGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKLF 594
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
EA+EFI M I+ +++VW +L + + LG+ ++ + +S KD+G
Sbjct: 595 EAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSG 644
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 57/83 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ K +AGY+ T V D+D+E KE SE+LA+A+G+++T PG T+ + KNLR+
Sbjct: 559 LNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRV 618
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CHN IK +S I +RE +VRD
Sbjct: 619 CSDCHNVIKLISKIVDREFVVRD 641
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
Query: 10 CREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFV 69
C+ V+ A + D++KN + + I K LE + GVRPN+ TFV
Sbjct: 333 CKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392
Query: 70 GVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQI 129
V+ AC G EG++ F ++ + + P LEH+ +VDL GR + +A + I+ M++
Sbjct: 393 SVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKM 452
Query: 130 DASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQ 189
S++W +L + + L E S + + GY ++ D A
Sbjct: 453 KPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYAD----AGRWKD 508
Query: 190 TYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
R + GL+ PPG +L L + GE H F+
Sbjct: 509 VERVRMIMKNRGLVK-PPGFSL-----LELNGEVHVFL 540
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 52/83 (62%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ K GY+P VL D+D+E K + SERLA+AYGL TPPG +RI KNLR
Sbjct: 723 LNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRS 782
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH K +S I REIIVRD
Sbjct: 783 CLDCHTMFKVISKIVQREIIVRD 805
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE R ++ N TFV +++ CG G V++G F S+ D+ I P++EH+ IV
Sbjct: 537 LELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVR 596
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
L GR ++ +A +FI ++ S +VW L + LG ++ L + D
Sbjct: 597 LLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDE-- 654
Query: 170 MPYTEYVL 177
T YVL
Sbjct: 655 ---TTYVL 659
>gi|302765332|ref|XP_002966087.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
gi|300166901|gb|EFJ33507.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
Length = 449
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L + ++AGY+P T+ VL +++E KE+ SE+LA+A+GLI+TPPG L I KNLR
Sbjct: 348 KLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLR 407
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ I R I+VRD
Sbjct: 408 VCSDCHAATKVIAKIMRRRIVVRD 431
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
LE K +G+ + +TF+ V+ AC G + E + F S+ DY I PT H+ +D
Sbjct: 163 LELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALD 222
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETL 139
GR ++ +A E I +M +V W+TL
Sbjct: 223 TIGRAGRLQDAEELIHSMPFHPETVTWKTL 252
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 61/280 (21%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWS------ 66
AL + D+++ IG LD ++ +L C +++ G + N GV P
Sbjct: 563 ALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLV 622
Query: 67 --------------------------TFVGVITACGCFGAVDEGFQHFESVTR---DYDI 97
+V ++ C G V+ G E +T ++D
Sbjct: 623 DLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDG 682
Query: 98 NPTLEHFLGIVDLY---GRLQKIAEAREFIRNMQIDA-SSVVWETLEKYAQTEPGLLLGE 153
+ TL + +LY GR + + R +R+ + W K T +G+
Sbjct: 683 SYTL-----LSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTT---FFVGD 734
Query: 154 PSSS---------LRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIS 204
+ L + KD GY+P T + L D+D E K+ SE+LA+AYG+++
Sbjct: 735 KTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILT 794
Query: 205 TPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
TP G +RI KNLR+CG+CH +S I + +II+RD +
Sbjct: 795 TPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSS 834
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%)
Query: 161 SNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRIC 220
S K++ GY+P T V D+ + KE+ + SE++A+ +GLI++PPG TLRI KNLR+C
Sbjct: 646 SRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVC 705
Query: 221 GECHNFIKKLSSIENREIIVRDKT 244
+CH K S I R IIVRD T
Sbjct: 706 SDCHTVGKLASKITGRRIIVRDGT 729
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G+ N T V+ AC G + EG +F +++D+ I E+ +G +DL GR + E
Sbjct: 468 GIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKE 527
Query: 120 AREFIRNMQIDASSVVWETL 139
A + M S V TL
Sbjct: 528 AEHVLHTMPFKVSFVALVTL 547
>gi|358357186|gb|AEU08433.1| pentatricopeptide repeat protein [Lejeunea cavifolia]
Length = 153
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
Query: 151 LGEPSSSL-RLSNKKKDAGYMPYTEY-VLRDLDQEAKEKPQTYRSERLAVAYGLISTPPG 208
+GE L RL+ + ++ GY+P T + VL D+D E K + + SE+LA+A GL+STPPG
Sbjct: 49 IGEIHGELDRLAFRMRELGYVPDTGFAVLHDVDDEEKTERLVHHSEKLAIALGLVSTPPG 108
Query: 209 RTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+ I KNLR+C +CH+ K +S +E REIIVRD
Sbjct: 109 DPICIYKNLRVCRDCHSATKVISKLEGREIIVRD 142
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 124/287 (43%), Gaps = 73/287 (25%)
Query: 17 AALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGK--------------RFENDGV- 61
A+ ++ +++ IGI D + LL+ C +L+ G+ + E+ G
Sbjct: 453 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCM 512
Query: 62 ----------------------RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINP 99
P+ + ++ AC G V+ G E++ + NP
Sbjct: 513 IDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENP 572
Query: 100 TLEHFLGIVDLY---GRLQKIAEAREFIRN---------MQIDASSVVWETL-------- 139
++ + ++Y GR ++A+ R + + I+ SVV E +
Sbjct: 573 G--SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPR 630
Query: 140 --EKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLA 197
E Y E +L E AG++P T VL+++++E KE + SE+LA
Sbjct: 631 NREIYGMLEEMEVLLE------------KAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 678
Query: 198 VAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
+A+GLIST PG L I KNLR+C CH K +S I REII RD+T
Sbjct: 679 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRT 725
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 51/279 (18%)
Query: 14 EVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEN-------DGVRPNWS 66
E + AL + ++KN G+ + + +L+ C + G ++ N ++P
Sbjct: 317 ESEKALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKE 376
Query: 67 TFVGVITACGCFGAVDEGFQHFESVTRDYD------------INPTLEHFLGIVDLYGRL 114
+ ++ G G ++E + + + + D I+ ++ + DL L
Sbjct: 377 HYACMVDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFEL 436
Query: 115 Q-KIAEAREFIRNMQIDASSVVWETLEKYAQ-------------------TEPGLLLG-- 152
+IA + NM A++ W +EK Q E +L G
Sbjct: 437 APEIASYHVLLSNMY--AAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGD 494
Query: 153 --EPSSSLRLSN------KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIS 204
P S+ L+ + K GY+P T+ V D++ E KE + SE+LA+A+ LI+
Sbjct: 495 KSHPQSASILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLIN 554
Query: 205 TPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
P +R+ KNLRICG+CH F K +S I REII+RDK
Sbjct: 555 GSPKFPIRVMKNLRICGDCHTFCKLVSRITMREIIMRDK 593
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 49/272 (18%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
ALE+ D++ + + + LL+VC L+ G + G++P+ + ++
Sbjct: 531 ALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIV 590
Query: 73 TACGCFGAVDEGFQHFE-----------------------------SVTRDYDINPTLEH 103
G G +++ Q S + +I P E
Sbjct: 591 RLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDET 650
Query: 104 -FLGIVDLY---GRLQKIAEAREFIRNMQI-DASSVVWETLEKYAQTEPGLLLGEPSSSL 158
++ + ++Y G L ++A R+ +RN+ + + W ++ + P +
Sbjct: 651 TYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPD--M 708
Query: 159 RLSN--------KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
R+ N K GY+P VL D+D+E K + SERLA+AYGL+ TPPG
Sbjct: 709 RVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHP 768
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KNLR C +CH +S I REIIVRD
Sbjct: 769 IRILKNLRSCLDCHTAFTVISKIVKREIIVRD 800
>gi|242049708|ref|XP_002462598.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
gi|241925975|gb|EER99119.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
Length = 655
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+ + ++PN TF+GV++AC G V +G +FE++TR+Y I PT++H+ +VDL GR
Sbjct: 501 SQLQRTSIKPNSITFIGVLSACCHTGMVAKGKYYFEAMTREYGIQPTIKHYGCMVDLLGR 560
Query: 114 LQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEP-------------SSSLRL 160
+ EA + + M + A V+W ++ A+ + + LGE +S + L
Sbjct: 561 AGYLEEAEQLVSMMPMKADVVIWGSILSAARAQGNIALGEKAAEELAKLDQTHGASKVAL 620
Query: 161 SNKKKDAGYMPYTEYVLRDLDQEAKEK 187
SN DAG+ V ++L E E+
Sbjct: 621 SNIYADAGHWTNVSVVRKELQDENFER 647
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 123/275 (44%), Gaps = 51/275 (18%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
+ ALE+ ++K I + ++ +L+ C L+ G + E G+ PN +
Sbjct: 445 RMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNC 504
Query: 71 VITACGCFGAVDEGFQHFE--SVTRDYDINPTLEHFLGIVDLYGRLQKIAEARE-FIRNM 127
++ G G +D+ E ++ + + TL L L+ ++ A E ++
Sbjct: 505 MVDLYGRAGLLDKAKNFIEENKISHEAVVWKTL---LSACRLHKHIEYAQLASEKLVQLE 561
Query: 128 QIDASSVV-----------W--------ETLEKYAQTEPG---------------LLLGE 153
Q DA S V W E+ + +PG L
Sbjct: 562 QYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSH 621
Query: 154 PSSSL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPP 207
P S+ +L + K+ GY T+ V+ D+++E +E + SE+LA+A+G+ISTP
Sbjct: 622 PRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPV 681
Query: 208 GRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
G LRI KNLR+C +CH IK ++ +REI+VRD
Sbjct: 682 GTALRIFKNLRVCEDCHEAIKFITRATDREIVVRD 716
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K K AGY P T+YVL+D+DQE K + SE+LAVA+G+++ T+R+ KNLRI
Sbjct: 587 LVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRI 646
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN IK +S + I+VRD
Sbjct: 647 CGDCHNAIKYMSKVVGVIIVVRD 669
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+PN TF GV++ C V+EG Q F S+ RD+ + P H+ +VD+Y R ++ EA
Sbjct: 412 VQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEA 471
Query: 121 REFIRNMQIDASSVVWETL 139
+FI+ M ++ ++ W L
Sbjct: 472 YKFIQGMPMEPTASAWGAL 490
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L K K AGY P T+YVL+D+DQE K + SE+LAVA+G+++ T+R+ KNLRI
Sbjct: 673 LVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRI 732
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CHN IK +S + I+VRD
Sbjct: 733 CGDCHNAIKYMSKVVGVIIVVRD 755
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
V+PN TF GV++ C V+EG Q F S+ RD+ + P H+ +VD+Y R ++ EA
Sbjct: 498 VQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEA 557
Query: 121 REFIRNMQIDASSVVWETL 139
+FI+ M ++ ++ W L
Sbjct: 558 YKFIQGMPMEPTASAWGAL 576
>gi|297804658|ref|XP_002870213.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316049|gb|EFH46472.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 112/265 (42%), Gaps = 83/265 (31%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF---------LGIVD-- 109
++PN+ T +GV+ AC G V+EG + S+ Y + P H+ G VD
Sbjct: 326 IKPNYVTLLGVLHACSHSGLVNEGLEFLNSMAEKYGVIPDSRHYTCVVDMLGRFGRVDEA 385
Query: 110 --------------------------LYGRLQKIAEA--REFIRNMQIDASSVV------ 135
L+GR++ ++EA R N Q+ ++ +
Sbjct: 386 YDLAKTIDVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYA 445
Query: 136 ----WETLEK-----------------YAQTEPGLLL-----------GEPSSSLR-LSN 162
WE E + + + + + GE L+ L N
Sbjct: 446 VAGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIKRFLKNLEN 505
Query: 163 KKKDAGY-----MPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNL 217
+ K+ G+ M + V D+D+EAKE+ + ERLA+AYGL+ P G T+RI NL
Sbjct: 506 RMKERGHRGSSSMITSSSVFVDVDEEAKEEMVSLHCERLALAYGLLHLPAGSTIRIMNNL 565
Query: 218 RICGECHNFIKKLSSIENREIIVRD 242
R+C +CH K +S I REI+VRD
Sbjct: 566 RMCRDCHEAFKLISEIVEREIVVRD 590
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+G++PN+ TFV V++AC G V++G HF S+ + I P EH+ +V L GR K+
Sbjct: 549 EGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKLF 607
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
EA+EFI M I+ +++VW +L + + LG+ ++ + +S KD+G
Sbjct: 608 EAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSG 657
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 14/189 (7%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIEL-LNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
V+AA E+ +K+K I + I+ L ++ D L K E PN TF+GV+
Sbjct: 303 VEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLC 362
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
AC G V+EG ++F+ + RDY+I PT++H+ +VD+ GR + EA I++M I+++S
Sbjct: 363 ACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNS 422
Query: 134 VVWET----------LEKYAQTEPGLLLGEPSSS---LRLSNKKKDAGYMPYTEYVLRDL 180
+VW T LE Q LL EP S + L+N AG V + +
Sbjct: 423 IVWRTLLAACRVHGNLELAEQVRQXLLELEPDHSSDYVLLANMYASAGQWNKVXRVRKSM 482
Query: 181 DQEAKEKPQ 189
+KP+
Sbjct: 483 HIRGVQKPK 491
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 12/106 (11%)
Query: 34 SPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTR 93
+PD IEL ++ E +G++PN F+ V+TAC G VDE +++F S+TR
Sbjct: 422 APDAIELF------------EQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTR 469
Query: 94 DYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
D+ I P +EH+ + DL GR ++ EA +FI M I + +W TL
Sbjct: 470 DFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATL 515
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+P T V D+++E K+ SERLA+ +G+I+TP G T+R+ KNLR+C +CH
Sbjct: 620 GYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTAT 679
Query: 228 KKLSSIENREIIVRDKT 244
K +S I REI+VRD +
Sbjct: 680 KFISKIVGREIVVRDNS 696
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 54/77 (70%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
G++ T VL D+D+E KE ++ SE+LA+A+GLIST PG +RI KNLR+C CH+
Sbjct: 642 GFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSAT 701
Query: 228 KKLSSIENREIIVRDKT 244
K +S I NREII RD+
Sbjct: 702 KLISKIFNREIIARDRN 718
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 48 KLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
K E + +DG+ PN TFVG+++AC G VD G Q F S+ +DY I+P +H+ +
Sbjct: 446 KAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCM 505
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETL----EKYAQTEPGLLLGE---------P 154
+DL GR EA ++NM++ +W +L + + E G L+ E P
Sbjct: 506 IDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNP 565
Query: 155 SSSLRLSNKKKDAG 168
+ + LSN AG
Sbjct: 566 GAYVLLSNIYAGAG 579
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL ++AGY+P T VL D+++E KE+ Y SE+LA+A+GLIS P ++R+ KNLR
Sbjct: 814 RLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLR 873
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ + REI VRD
Sbjct: 874 VCKDCHTATKFIARVTQREIAVRD 897
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDI-NPTLEHFLGIVDLYGRLQ 115
+ VRP+ STFV V++ C G V++G F I +EH+ +VD+ GR+
Sbjct: 634 QRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMG 693
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA-GYM 170
+ EA +FIR M + A SVVW +L + L GE ++ + + D+ GY+
Sbjct: 694 YLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYV 749
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL ++AGY+P T VL D+++E KE+ Y SE+LA+A+GLIS P ++R+ KNLR
Sbjct: 818 RLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLR 877
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ + REI VRD
Sbjct: 878 VCKDCHTATKFIARVTQREIAVRD 901
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDI-NPTLEHFLGIVDLYGRLQ 115
+ VRP+ STFV V++ C G V++G F I +EH+ +VD+ GR+
Sbjct: 638 QRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMG 697
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDA-GYM 170
+ EA +FIR M + A SVVW +L + L GE ++ + + D+ GY+
Sbjct: 698 YLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYV 753
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 57/83 (68%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+ K ++ GYMP VL D+D E K SE+LAVA+G++++ PG ++I KNLRI
Sbjct: 572 LNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRI 631
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH IK +S I NREI++RD
Sbjct: 632 CGDCHFAIKLISKIVNREIVIRD 654
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++PN+ TFV V+ AC G + EG+ F + ++D+ P +EH+ +VDL GR + E
Sbjct: 396 GIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKE 455
Query: 120 AREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRD 179
A I+ M++ +VW +L + + LGE S+ + GY +L +
Sbjct: 456 AYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYV----LLSN 511
Query: 180 LDQEAKEKPQTYRSERLAVAYGLISTP 206
+ +A R L +GL+ TP
Sbjct: 512 IYADAGRWDDVERMRILMKNHGLLKTP 538
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K GY+P VL D++ E KE+ Y SE++A+A+GLI +P G T+RI KNLRI
Sbjct: 582 LIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMALAFGLIHSPEGETIRIMKNLRI 641
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH IK +S + R+I+VRD
Sbjct: 642 CDDCHVAIKLISVVTRRKIVVRD 664
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEA 120
+ P++ TFVGV+ AC G VDEG + + ++ I P EH+ +V L R ++ EA
Sbjct: 407 IVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEA 466
Query: 121 REFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
+FI + I V W++L Q LG + L K D G
Sbjct: 467 EQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQLKPNDVG 514
>gi|302764608|ref|XP_002965725.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
gi|300166539|gb|EFJ33145.1| hypothetical protein SELMODRAFT_84657 [Selaginella moellendorffii]
Length = 502
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L + ++AGY+P T+ VL +++E KE+ SE+LA+A+GLI+TPPG L I KNLR
Sbjct: 401 KLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLR 460
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ I R I+VRD
Sbjct: 461 VCSDCHAATKVIAKIMRRRIVVRD 484
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 4/141 (2%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPD----IIELLNVCMDLKLLEAGKRFEN 58
N+ L R ++ A +V D + + F +S I L + LE K
Sbjct: 165 NALLNMFVRFGSLEEARKVFDAMDHPDAFSNSVSWTAMIAALAQHGQGDEALELFKEMNL 224
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+G+ + +TF+ V+ AC G + E + F S+ DY I PT H+ +D GR ++
Sbjct: 225 EGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQ 284
Query: 119 EAREFIRNMQIDASSVVWETL 139
+A E I +M +V W+TL
Sbjct: 285 DAEELIHSMPFHPETVTWKTL 305
>gi|388458812|gb|AFK31272.1| hypothetical protein, partial [Oryza sativa Indica Group]
Length = 294
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 49/274 (17%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
ALE+ +++ G+ D ++ +L C + G+R+ N G+ P + ++
Sbjct: 15 ALELFHQMEAAGVAPDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMV 74
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG-----------------IVDL----- 110
G G +DE + + + D D+ L LG ++DL
Sbjct: 75 DLFGRAGQLDEAKKVIDEMPMDPDL-AVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNS 133
Query: 111 ------------YGRLQKIAEAREFI--RNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
GR ++ + R + RN+ +A V E + + G L P +
Sbjct: 134 GRYVLLVNLLAGAGRWDEVGKVRRLMDERNVSKEAGRSVIEVDGEACEFRCGNLR-HPQA 192
Query: 157 ------SLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
++ + ++ + GY+P T L D+ +E KE SE+LA+A+GL+ P T
Sbjct: 193 REIYAMAVDMVSRIRAEGYVPDTGEALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRET 252
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
LRI KNLR+C +CH K +S + REI+VRD++
Sbjct: 253 LRITKNLRVCRDCHEATKYVSRVFGREIVVRDRS 286
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 125/276 (45%), Gaps = 51/276 (18%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
+ ALE+ ++ I I +L C L+E G+R ++ G++P +
Sbjct: 404 REALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGC 463
Query: 71 VITACGCFGAVDEGFQHF-----------------------------ESVTRDYDINPTL 101
V+ G G +DE +Q E++ + +NP+
Sbjct: 464 VVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSH 523
Query: 102 E-HFLGIVDLYGRLQKIAEAREFIRNMQ------------IDASSVVWETLEKYAQTEPG 148
++ + ++Y + + A + M+ I+ VV +E +A+
Sbjct: 524 SGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVV---VEFFAEDSDH 580
Query: 149 LLLGEPSSSLR-LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPP 207
L E + + ++ K AGY+P T V ++D+ KE ++ SE+LA+A+GL+ P
Sbjct: 581 PQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDP 640
Query: 208 GRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
G T+R+ KNLR+C +CH+ K +S + NREI+VRD+
Sbjct: 641 GATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDR 676
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 21/197 (10%)
Query: 61 VRPNWSTFVGVITACGCFGAVDEG-------FQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+RP + +++ACG G V+ G F+ +S DY I L G +
Sbjct: 387 IRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNY 446
Query: 114 LQKIAEAREFIR---NMQIDASSVVWETLE----KYAQTEPGLLLGEPSSSLRLSNKKKD 166
++K+ R ++ ++ ++VV E T+ L E L+L
Sbjct: 447 VRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKL------ 500
Query: 167 AGYMPYTEYVLR-DLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
GY+P T V D++ E KE Y SE+LA+ +GL++TPPG T+R+ KNLR+CG+CH+
Sbjct: 501 VGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHS 560
Query: 226 FIKKLSSIENREIIVRD 242
K +S I +R+II+RD
Sbjct: 561 AAKLISLIFDRQIILRD 577
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
LK + K G P+ TF+G++ AC G V+EGF++F + Y + P ++H+
Sbjct: 305 LKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGC 364
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
+VDL GR ++ EA EFI + I + ++W TL + + LG+
Sbjct: 365 MVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGK 411
>gi|388458804|gb|AFK31268.1| hypothetical protein, partial [Oryza sativa Indica Group]
gi|388458808|gb|AFK31270.1| hypothetical protein, partial [Oryza sativa Indica Group]
gi|388458814|gb|AFK31273.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458820|gb|AFK31276.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458822|gb|AFK31277.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458824|gb|AFK31278.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458826|gb|AFK31279.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458828|gb|AFK31280.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458830|gb|AFK31281.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458832|gb|AFK31282.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458836|gb|AFK31284.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388458838|gb|AFK31285.1| hypothetical protein, partial [Oryza rufipogon]
gi|388458840|gb|AFK31286.1| hypothetical protein, partial [Oryza rufipogon]
gi|388458842|gb|AFK31287.1| hypothetical protein, partial [Oryza rufipogon]
gi|388458844|gb|AFK31288.1| hypothetical protein, partial [Oryza rufipogon]
Length = 294
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 49/274 (17%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
ALE+ +++ G+ D ++ +L C + G+R+ N G+ P + ++
Sbjct: 15 ALELFHQMEAAGVAPDDVTLLNVLTACAHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMV 74
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG-----------------IVDL----- 110
G G +DE + + + D D+ L LG ++DL
Sbjct: 75 DLFGRAGQLDEAKKVIDEMPMDPDL-AVLGALLGACKIHGDVDLGEAIGWRVIDLDPDNS 133
Query: 111 ------------YGRLQKIAEAREFI--RNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
GR ++ + R + RN+ +A V E + + G L P +
Sbjct: 134 GRYVLLANLLAGAGRWDEVGKVRRLMDERNVSKEAGRSVIEVDGEACEFRCGNLR-HPQA 192
Query: 157 ------SLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
++ + ++ + GY+P T L D+ +E KE SE+LA+A+GL+ P T
Sbjct: 193 REIYAMAVDMVSRIRAEGYVPDTGEALHDVAEEDKEAALLCHSEKLAIAFGLLRARPRET 252
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRDKT 244
LRI KNLR+C +CH K +S + REI+VRD++
Sbjct: 253 LRITKNLRVCRDCHEATKYVSRVFGREIVVRDRS 286
>gi|190612677|gb|ACE80716.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS K+AGY P T +VL D+++E K + SE+LA+A+GL++T PG L+I KNLR
Sbjct: 58 RLSGPMKEAGYEPDTRFVLHDVEEEEKVFRLCHHSEKLAIAFGLLNTVPGTRLQIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K ++ + REI+VRD
Sbjct: 118 VCVDCHTATKFIAKVAGREIVVRD 141
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 54/80 (67%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
KD GY+P T + L D+D E K+ SE+LA+AYG+++TP G +RI KNLR+CG+CH
Sbjct: 755 KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCH 814
Query: 225 NFIKKLSSIENREIIVRDKT 244
+S I + EII+RD +
Sbjct: 815 TAFTYMSRIIDHEIILRDSS 834
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 47 LKLLEAGKR--FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF 104
L + E +R F+ DGV T + V+ AC G +D+G ++F + D+ ++P EH+
Sbjct: 564 LGIFEEMRRIGFKLDGV-----TLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHY 618
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
+VDL GR ++ A I M ++ VVW L + + LGE
Sbjct: 619 ACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGE 667
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K AGY+P T +L D++ + +E+ SE+LA+A+GL++T PG T+ ++KNLR+CG+CH
Sbjct: 727 KAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCH 785
Query: 225 NFIKKLSSIENREIIVRD 242
N K +S + REIIVRD
Sbjct: 786 NATKYISLVTGREIIVRD 803
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ + V PN T++ VI+AC G VDEG +HF+S+ +DY + P+++H+ +VDL GR
Sbjct: 541 KMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRA 600
Query: 115 QKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
+I EA +FI NM I V+ + + +GE ++ + GY
Sbjct: 601 GRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGY 655
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 16/216 (7%)
Query: 37 IIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD 96
++++L C LK EA + E V+PN ++ +++AC VD G + + + D
Sbjct: 470 MVDILGRCGKLK--EAEELIERMVVKPNEMVWLALLSACRMHSDVDRG-EKAAAAIFNLD 526
Query: 97 INPTLEHFLGIVDLY---GRLQKIAEAR-EFIRNMQIDASSVVWETL-----EKYAQTEP 147
+ + L + ++Y GR +++ R + +N + W + E ++ +P
Sbjct: 527 SKSSAAYVL-LSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQP 585
Query: 148 GLL-LGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTP 206
+ E LR K K+ GY P L D++ E KE+ Y SERLA+A+GLI+T
Sbjct: 586 HCSRIYEKLEFLR--EKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTV 643
Query: 207 PGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
G + + KNLR+C +CH IK +S + REI++RD
Sbjct: 644 EGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRD 679
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 63 PNWSTFVGVITACGCFGAVDEGFQHFESVTRDYD-INPTLEHFLGIVDLYGRLQKIAEAR 121
P+ TF G+++AC G +++G + F ++ + I+ ++H+ +VD+ GR K+ EA
Sbjct: 425 PDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAE 484
Query: 122 EFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS-NKKKDAGYM 170
E I M + + +VW L + + GE +++ + + K A Y+
Sbjct: 485 ELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYV 534
>gi|296088921|emb|CBI38481.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%)
Query: 55 RFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRL 114
+ + +G RPN+ TF+ VI+AC G V+EG+++F S+TRDY I P +H+ +VDL GR
Sbjct: 283 KMKTEGFRPNYVTFLAVISACSHGGLVNEGWEYFMSMTRDYGIQPRGQHYAAMVDLLGRA 342
Query: 115 QKIAEAREFIRNMQIDASSVVWETL 139
++ EA EF++N SV+W L
Sbjct: 343 GRLHEAFEFVQNSPCGEHSVIWGAL 367
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 49/272 (18%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVI 72
ALE+ D++ + + + LL+VC L+ G + G++P+ + ++
Sbjct: 550 ALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIV 609
Query: 73 TACGCFGAVDEGFQHFE-----------------------------SVTRDYDINPTLEH 103
G G +++ Q S + +I P E
Sbjct: 610 RLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDET 669
Query: 104 -FLGIVDLY---GRLQKIAEAREFIRNMQI-DASSVVWETLEKYAQTEPGLLLGEPSSSL 158
++ + ++Y G L ++A R+ +RN+ + + W ++ + P +
Sbjct: 670 TYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPD--M 727
Query: 159 RLSN--------KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRT 210
R+ N K GY+P VL D+D+E K + SERLA+AYGL+ TPPG
Sbjct: 728 RVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHP 787
Query: 211 LRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
+RI KNLR C +CH +S I REIIVRD
Sbjct: 788 IRILKNLRSCLDCHTAFTVISKIVKREIIVRD 819
>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
Length = 1121
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 55/84 (65%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL D GY+ T V ++ + K SE+LAVA+G++STPPG +LRI KNLR
Sbjct: 1020 RLERAMVDRGYVVDTGMVTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKNLR 1079
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
CG+CH IK +S+IE REI+VRD
Sbjct: 1080 ACGDCHTAIKLISAIEGREIVVRD 1103
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+ + DG RP+ TFV +++ CG G ++E +F ++ R++ I+P+ +H+ ++DL R
Sbjct: 829 RTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLAR 888
Query: 114 LQKIAEAREFIRNMQID--ASSVVWETL 139
++ +A +FI + + ASS +W L
Sbjct: 889 AGELQQAEDFIARISVSSPASSPMWMAL 916
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 56/83 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L + K+ GYMP T+ L D+++E KE SE+LA+ + +++T PG T+RI KN+R+
Sbjct: 577 LVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRV 636
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH K +S I REII+RD
Sbjct: 637 CGDCHVATKLISKIAEREIIIRD 659
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
K+ + G P+W FV V+ AC G VDEG F ++ +Y I P +EH+ +VDL GR
Sbjct: 396 KKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCF-NLMAEYGITPGIEHYNCMVDLLGR 454
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL 139
KI EA R M ++ + VW +L
Sbjct: 455 AGKIDEAYHLTRQMPMEPNERVWGSL 480
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+G++PN+ TFV V++AC G V++G HF S+ + I P EH+ +V L GR K+
Sbjct: 628 EGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKLF 686
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
EA+EFI M I+ +++VW +L + + LG+ ++ + +S KD+G
Sbjct: 687 EAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSG 736
>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
Length = 809
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 55/86 (63%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL D GY+ T V ++ + K SE+LAVA+G++STPPG +LRI KNLR
Sbjct: 708 RLERAMVDRGYVVDTGMVTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKNLR 767
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
CG+CH IK +S+IE REI+VRD
Sbjct: 768 ACGDCHTAIKLISAIEGREIVVRDSN 793
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+ + DG RP+ TFV +++ CG G ++E +F ++ R++ I+P+ +H+ ++DL R
Sbjct: 517 RTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLAR 576
Query: 114 LQKIAEAREFIRNMQID--ASSVVWETL 139
++ +A +FI + + ASS +W L
Sbjct: 577 AGELQQAEDFIARISVSSPASSPMWMAL 604
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 56/75 (74%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY P T++VL+++DQE +E+ SERLAVA+G++++ T+R+ KNLRICG+CHN I
Sbjct: 592 GYQPNTDFVLQNVDQEQREETLCSHSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAI 651
Query: 228 KKLSSIENREIIVRD 242
K ++ I +IIVRD
Sbjct: 652 KLIAKIVGMQIIVRD 666
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 12/185 (6%)
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKI 117
+ GV PN TF+GV++ C DEG F S++ ++ I P +H+ +VD+ R ++
Sbjct: 406 DSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRL 465
Query: 118 AEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYV- 176
EA +FIR M I+ ++ W L + + LG ++S + +AG YV
Sbjct: 466 EEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQLFEIEPDNAG-----NYVL 520
Query: 177 LRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENR 236
L ++ AK+ + ++ GL T PGR+ KN + ++F+ S E +
Sbjct: 521 LSNILVTAKKWVEASEIRKMMRDKGLAKT-PGRSWVQVKN-----KVYSFVTGDKSNEQK 574
Query: 237 EIIVR 241
++I R
Sbjct: 575 DMIYR 579
>gi|190612691|gb|ACE80723.1| pentatricopeptide repeat protein [Bazzania trilobata]
Length = 152
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 58/84 (69%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L+ K K GY+P T+ VL+++D+E K+ SE+LA+AYGL+ TP G+ +R+ KNLR
Sbjct: 58 KLTEKLKAEGYIPDTQLVLQNIDEEDKKVALCSHSEKLAIAYGLMCTPRGQPIRVYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH K +S + REII RD
Sbjct: 118 VCSDCHTATKFISKVTGREIIARD 141
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 53/76 (69%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY P VL D+D+E KE SE+LA+ +GLI+T PG T+RI KNLR+C +CH+
Sbjct: 580 GYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSAT 639
Query: 228 KKLSSIENREIIVRDK 243
K +S + NREIIVRD+
Sbjct: 640 KLISQVYNREIIVRDR 655
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
+ A EV +K+ N + S + + M + +A F + PN TFVGV+ A
Sbjct: 353 IDLAWEVFEKMSNKEV---SSWNAMIGGLAMHGRAEDAIDLFSKMDINPNEITFVGVLNA 409
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G V +G F S+ ++Y + P +EH+ IVDL GR + EA + + ++ + +
Sbjct: 410 CAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPA 469
Query: 135 VWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSE 194
VW L + + LGE + L + +++G YT +L ++ +A +
Sbjct: 470 VWGALLGACRKHGNVELGERVGKILLELEPQNSG--RYT--LLSNIYAKAGRWEEVGEVR 525
Query: 195 RLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
+L G+ +TP + + + GE H FI
Sbjct: 526 KLMKERGIKTTPGTSIIDLGR-----GEVHKFI 553
>gi|358357164|gb|AEU08422.1| pentatricopeptide repeat protein [Physcomitrium pyriforme]
Length = 152
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 52/84 (61%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L + K GY P T VL D+D+E KE Y SE+LA+ YGL+ TPPG +RI KNLR
Sbjct: 58 KLWERMKAQGYSPDTRLVLHDIDEEDKEMALCYHSEKLAITYGLMRTPPGEAIRIFKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
C +CH K +S + REI RD
Sbjct: 118 GCSDCHTATKFISKVTGREIEARD 141
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 120/271 (44%), Gaps = 53/271 (19%)
Query: 22 MDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRPNWSTFVGVITACG 76
+ +++ GI I +L+ C L++ G+ F ND G++P + ++ G
Sbjct: 355 LSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLG 414
Query: 77 CFGAVDEGFQHFESVTRDYDINP---TLEHFLGIVDLYGRLQKIAEAREFIRNM------ 127
G ++E E + + + P + LG ++ ++ A E + M
Sbjct: 415 RAGYLEEA----EELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSG 470
Query: 128 ------QIDASSVVWETLEKY--------AQTEPGL-----------LLGEPSSSLR--- 159
+ ASS W+ + + +PG L E S R
Sbjct: 471 AYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKD 530
Query: 160 -------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLR 212
+SNK G+MP T VL +D++ KE Y SE++AVA+GLISTPP L
Sbjct: 531 IHSMLEEISNKLSLEGHMPDTTQVLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLC 590
Query: 213 IKKNLRICGECHNFIKKLSSIENREIIVRDK 243
I KNLRIC +CH+ +K +S + R+I++RD+
Sbjct: 591 IVKNLRICEDCHSSMKLISKMYERKIVIRDR 621
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 8/139 (5%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEK--YAQTEPGLLLGEPSSSL-----RLSNK 163
GR +AE R+ ++ + S W +E +A T G+ S+ L
Sbjct: 549 GRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGL 608
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
++AGY P Y L D+D+E K Y SERLAVAY L+ G +R+ KNLR+C +C
Sbjct: 609 LREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDC 668
Query: 224 HNFIKKLSSIENREIIVRD 242
H IK +S ++ REII+RD
Sbjct: 669 HTAIKIISKVKEREIILRD 687
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%)
Query: 62 RPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAR 121
+PN TFV ++AC G V+EG + +ES+ + + P H+ +VD+ GR + EA
Sbjct: 430 KPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAM 489
Query: 122 EFIRNMQIDASSVVWETLEKYAQTEPGLLLGE 153
E I +M ++ + VW +L +T L + E
Sbjct: 490 EMIDSMTVEPDAAVWGSLLGACRTHSQLDVAE 521
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY+P T+ VL DL++E K + SERLA+AYGL+ TPPG +RI KNLR C +CH
Sbjct: 1114 GYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIF 1173
Query: 228 KKLSSIENREIIVRD 242
K +S I +EIIVRD
Sbjct: 1174 KVISKIVKQEIIVRD 1188
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
+ ++ N TFV +++ CG G V +G F+S+ D+ I P++EH+ IV L GR ++
Sbjct: 929 NSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLN 988
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVL 177
+A FI ++ S++VW L + LG S+ L + +D T YVL
Sbjct: 989 DALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDE-----TTYVL 1042
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L ++ K GY+P TE VL D+D KEK Y SER+AVA+ L++ P G + +KKNLR+
Sbjct: 651 LLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRV 710
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH+ +K +S + R IIVRD
Sbjct: 711 CSDCHSALKFISKVTERNIIVRD 733
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++PN TFV ++ C G V++G +F S+ + Y + P EH+ ++DL GR K+ E
Sbjct: 475 GLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKE 534
Query: 120 AREFIRNMQIDASSVVW 136
A +FI NM + + W
Sbjct: 535 AEDFINNMPFEPNVFGW 551
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L ++ K AGY+P + + D++++ K++ + SERLA+A+GL++T PG TL I+KNLR+
Sbjct: 719 LGDEIKAAGYVPDPDSI-HDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRV 777
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
CG+CH+ K +S + REIIVRD
Sbjct: 778 CGDCHDTTKYISLVTGREIIVRD 800
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 50 LEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVD 109
L+ + V+PN TF+ VI+AC G V+EG F+S+ DY + PT++H+ +VD
Sbjct: 533 LDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVD 592
Query: 110 LYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGY 169
L GR ++ +A FI+ M I V + + + LGE ++ + GY
Sbjct: 593 LLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGY 652
>gi|218185168|gb|EEC67595.1| hypothetical protein OsI_34962 [Oryza sativa Indica Group]
Length = 838
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 128/301 (42%), Gaps = 73/301 (24%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAG----KRFE- 57
N+ L L +AAL + D++ G+ +D ++ ++ C L++ G R E
Sbjct: 536 NAMLHGLAVHGHGRAALSLFDRMHGEGVPVDGVTVLSVMCACAHAGLVDEGLDYFDRMEI 595
Query: 58 ------------------------NDG--------VRPNWSTFVGVITACGCFGAVDEGF 85
ND + PN + + +I ACG G ++ G
Sbjct: 596 EFGIEPSIEHYGCMVDMLSRAGRLNDAEKLIHGMPIVPNAAIYRSLIRACGIHGKLELGK 655
Query: 86 QHFESVTRDYDINPTLEHFLGIVDLYG---RLQKIAEAREFIRNMQIDAS---------S 133
+ + R + + + H L I + Y R +AR+ +++M ID S
Sbjct: 656 KMIAELMR-LEPDDSGNHVL-ISNFYATTNRWDDAKKARKEMKSMGIDKSPGSSFVDING 713
Query: 134 VVWETL----------EKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQE 183
V+ E L E YA E + + + G+ T L D+++E
Sbjct: 714 VLHEFLVGDKTHPASKEIYAMVED------------IETRLSECGHRSSTSSALFDVEEE 761
Query: 184 AKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
K +Y SERLA+A+ LI++ PG +RI KNLR+C +CH K +S + REI++RD+
Sbjct: 762 DKADALSYHSERLAIAFALIASNPGAPIRIIKNLRVCADCHESAKLVSRVYGREIVMRDR 821
Query: 244 T 244
T
Sbjct: 822 T 822
>gi|383135465|gb|AFG48743.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
Length = 95
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 55/77 (71%)
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
+ GY+P T +VL D+ +E K SE+LAVA+G+I+TPP +R+ KNLR+CG+CH+
Sbjct: 1 EEGYVPDTNFVLHDVGEEQKAHALHCHSEKLAVAFGIINTPPRTPIRVVKNLRVCGDCHS 60
Query: 226 FIKKLSSIENREIIVRD 242
IK +S + REII+RD
Sbjct: 61 VIKFISKVYEREIILRD 77
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K AGY+P T +VL ++++ +E Y SE++A+A+ LI+ P G ++RI KN+RICG+CH
Sbjct: 435 KKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCH 494
Query: 225 NFIKKLSSIENREIIVRD 242
+ K +S + REI+VRD
Sbjct: 495 SAFKYVSKVFKREIVVRD 512
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++ N TF+ V+TAC G V EG +H+ + +DY++ P ++H++ VDL GR + E
Sbjct: 255 GIQLNQITFLSVLTACSHGGLVKEG-KHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKE 313
Query: 120 AREFIRNMQIDASSVVWETL 139
A F+ M ++ ++ VW L
Sbjct: 314 ALIFVFKMPMEPTAAVWGAL 333
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 53/76 (69%)
Query: 168 GYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
GY P VL D+D+E KE SE+LA+ +GLI+T PG T+RI KNLR+C +CH+
Sbjct: 581 GYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSAT 640
Query: 228 KKLSSIENREIIVRDK 243
K +S + NREIIVRD+
Sbjct: 641 KLISQVYNREIIVRDR 656
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFENDGVRPNWSTFVGVITA 74
+ A EV +K+ N + S + + M + +A F + PN TFVGV+ A
Sbjct: 354 IDLAWEVFEKMSNKEV---SSWNAMIGGLAMHGRAEDAIDLFSKMDIYPNEITFVGVLNA 410
Query: 75 CGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASSV 134
C G V +G F S+ ++Y + P +EH+ IVDL GR + EA + + ++ + +
Sbjct: 411 CAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPA 470
Query: 135 VWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSE 194
VW L + + LGE + L + +++G YT +L ++ +A +
Sbjct: 471 VWGALLGACRKHGNVELGERVGKILLELEPQNSG--RYT--LLSNIYAKAGRWEEVGEVR 526
Query: 195 RLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
+L G+ +TP + + + GE H FI
Sbjct: 527 KLMKERGIKTTPGTSIIDLGR-----GEVHKFI 554
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 56/85 (65%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
++ + K GY P T + D+D+E KE SE++A+A+GLIS P L I KNLR+
Sbjct: 642 ITRRLKSVGYSPITSQITVDVDEEEKEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRV 701
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
C +CH+ IK +S I NREIIVRD++
Sbjct: 702 CEDCHSAIKLISRIWNREIIVRDRS 726
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
DG +PN T++ ++TAC +DEG +FE + ++I P +EH+ ++DL GR +
Sbjct: 465 DGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLD 524
Query: 119 EAREFIRNMQIDASSVVWETL 139
EA + +R M + ++V+W ++
Sbjct: 525 EAMDLVRTMPMQPNAVIWASI 545
>gi|357475531|ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509106|gb|AES90248.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 763
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 51 EAGKRFE---NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGI 107
EA RF + GV PN +TFV V++AC G VDEG + F S+ +Y I PT+EH+ +
Sbjct: 517 EAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCV 576
Query: 108 VDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSS 156
VDL GR ++ EA EFI M I A V+W L + + LGE ++
Sbjct: 577 VDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVELGERAA 625
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 56/86 (65%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RL K AGY+ T VL D+ QE KE+ SE+LA+A+GL+STP G LR+ KNLR
Sbjct: 700 RLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLR 759
Query: 219 ICGECHNFIKKLSSIENREIIVRDKT 244
+C +CH K +S + R+I++RD +
Sbjct: 760 VCSDCHTATKLISKVTGRDILMRDSS 785
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
+ GVRPN TF+ +TAC G +++G + +T D+ I P +HF IVDL GR
Sbjct: 522 MQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCG 581
Query: 116 KIAEAREFI-RNMQIDASSVVWETL 139
++ EA + + R Q D + W L
Sbjct: 582 RLDEAEKLLERTSQADV--ITWMAL 604
>gi|5050911|emb|CAB45019.1| PCMP-H2 [Arabidopsis thaliana]
Length = 287
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 53/80 (66%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K+AGY + L DLD+E KE Y SE+LAVA+GL+ P G +RI KNLR+CG+CH
Sbjct: 192 KEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCH 251
Query: 225 NFIKKLSSIENREIIVRDKT 244
+ +K +S + R II+RD
Sbjct: 252 SAMKYISRVYLRHIILRDSN 271
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 79/139 (56%), Gaps = 8/139 (5%)
Query: 112 GRLQKIAEAREFIRNMQIDAS-SVVWETLEKYAQTEPGLLLGEPS-SSLR-----LSNKK 164
G K+ E + +R M++ + ++ W +E+ T P+ +R L K
Sbjct: 595 GNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKV 654
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLI-STPPGRTLRIKKNLRICGEC 223
K+ GY+P T +VL+DLD+E K + Y SE+LAVA+ L S T+RI KNLR+CG+C
Sbjct: 655 KELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDC 714
Query: 224 HNFIKKLSSIENREIIVRD 242
H ++K +S I R+II RD
Sbjct: 715 HTWMKFVSKIVGRDIIARD 733
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 56 FENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ 115
++ G+ PN T++GV++AC G ++EG F S +I T +H+ +VDL GR
Sbjct: 471 MKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAG 530
Query: 116 KIAEAREFIRNMQIDASSVVWETL 139
++ EA I + I + V+W TL
Sbjct: 531 RLKEAEMLINQVNI-SDVVIWRTL 553
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%)
Query: 165 KDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECH 224
K AGY+P T +VL ++++ +E Y SE++A+A+ LI+ P G ++RI KN+RICG+CH
Sbjct: 538 KKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCH 597
Query: 225 NFIKKLSSIENREIIVRD 242
+ K +S + REI+VRD
Sbjct: 598 SAFKYVSKVFKREIVVRD 615
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 60 GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE 119
G++ N TF+ V+TAC G V EG +H+ + +DY++ P ++H++ VDL GR + E
Sbjct: 358 GIQLNQITFLSVLTACSHGGLVKEG-KHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKE 416
Query: 120 AREFIRNMQIDASSVVWETL 139
A F+ M ++ ++ VW L
Sbjct: 417 ALIFVFKMPMEPTAAVWGAL 436
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 118/273 (43%), Gaps = 47/273 (17%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND-----GVRP---NWST 67
+ ALE D++ G + I +L C + +E G + N V+P +++
Sbjct: 421 REALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTC 480
Query: 68 FVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAE-------- 119
VG+++ G F E F + D TL + + Y +K+AE
Sbjct: 481 IVGLLSKAGMFKDA-EDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPN 539
Query: 120 -AREFIRNMQIDASSVVWETLEKY--------AQTEPGL-----------LLGE----PS 155
+ ++ I A S WE + K + EPG+ L E P
Sbjct: 540 DSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPE 599
Query: 156 SSL------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGR 209
+L + +K K GY P D+D+E +E +Y SE+LAVAYGLI TP
Sbjct: 600 ITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKS 659
Query: 210 TLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
L + KN+RIC +CH+ IK +S I R I++RD
Sbjct: 660 PLYVTKNVRICDDCHSAIKLISKISKRYIVIRD 692
>gi|367062916|gb|AEX11740.1| hypothetical protein 0_16763_01 [Pinus taeda]
gi|367062922|gb|AEX11743.1| hypothetical protein 0_16763_01 [Pinus taeda]
gi|367062926|gb|AEX11745.1| hypothetical protein 0_16763_01 [Pinus taeda]
Length = 119
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 61/84 (72%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L + K+AGY+P T + L+++ +E +E SER A+A+GL++T PG LRI KNLR
Sbjct: 18 KLFRQIKEAGYVPDTNFALQNVAKEEQEHILCGHSERQAIAFGLLNTSPGTPLRIIKNLR 77
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+CG+CH+ +K +S+I REI++RD
Sbjct: 78 VCGDCHSAMKYISNIAEREIVMRD 101
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 56/84 (66%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
+L K ++AGY+P T VL DLD+E K SE+LA+A+ L+++ PG + + KNLR
Sbjct: 568 KLLEKMQEAGYVPNTGSVLHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLR 627
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH IK ++ I REIIVRD
Sbjct: 628 VCTDCHTAIKLITKIAQREIIVRD 651
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 11/181 (6%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
G PN+ TF+ V+ AC G +D+G + ++ + + I P +EH+ +VDL GR +
Sbjct: 392 SGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLD 451
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYVLR 178
EA I+ M++ + +W L + + L E S+ + GY +L
Sbjct: 452 EAYGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYY----VLLS 507
Query: 179 DLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF-IKKLSSIENRE 237
++ EA R L G I PPG + ++ + G H F + S +++E
Sbjct: 508 NIYAEAGMWKDVERMRVLVKTRG-IEKPPGYS-----SVELKGRTHLFYVGDKSHPQHKE 561
Query: 238 I 238
I
Sbjct: 562 I 562
>gi|302818245|ref|XP_002990796.1| hypothetical protein SELMODRAFT_429215 [Selaginella moellendorffii]
gi|300141357|gb|EFJ08069.1| hypothetical protein SELMODRAFT_429215 [Selaginella moellendorffii]
Length = 312
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 116/256 (45%), Gaps = 28/256 (10%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRFEND----GVRPNWSTFVG 70
++A+++ ++ G+ + + L+ C L+ L+ G+ + G+ + T
Sbjct: 39 ARSAIQLFQEMDQCGVLPANMTFVAALDACSSLEALKLGREIHSAAASCGMDSDLVTANA 98
Query: 71 VITACGCFGAVDEGFQHFESVTRD-------------YDINP-TLEHFLGIVDLYGRLQK 116
+I G G++ E F F + + P ++ + +LY L+K
Sbjct: 99 IINMYGKCGSIGEAFAMFTRMPEKNDEDRAARAAEEAFQREPKCAAAYIMLSNLYAALKK 158
Query: 117 IAEAREFIRNMQIDA----SSVVWETLEKYAQTEPGLLLGEPSSS------LRLSNKKKD 166
EA + + M+ + W ++K P S RL ++ +
Sbjct: 159 WDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRI 218
Query: 167 AGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNF 226
GY P + V+ +++E K++ Y SE+LAVA+G+ STPP L I +NLR+C +CH+
Sbjct: 219 KGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCIVENLRVCSDCHSA 278
Query: 227 IKKLSSIENREIIVRD 242
IK +S +E R I VRD
Sbjct: 279 IKFISGVEGRRITVRD 294
>gi|297733959|emb|CBI15206.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 14/189 (7%)
Query: 15 VKAALEVMDKLKNIGIFLDSPDIIEL-LNVCMDLKLLEAGKRFENDGVRPNWSTFVGVIT 73
V+AA E+ +K+K I + I+ L ++ D L K E PN TF+GV+
Sbjct: 203 VEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLC 262
Query: 74 ACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQIDASS 133
AC G V+EG ++F+ + RDY+I PT++H+ +VD+ GR + EA I++M I+++S
Sbjct: 263 ACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNS 322
Query: 134 VVWET----------LEKYAQTEPGLLLGEPSSS---LRLSNKKKDAGYMPYTEYVLRDL 180
+VW T LE Q LL EP S + L+N AG V + +
Sbjct: 323 IVWRTLLAACRVHGNLELAEQVRQQLLELEPDHSSDYVLLANMYASAGQWNKVVRVRKSM 382
Query: 181 DQEAKEKPQ 189
+KP+
Sbjct: 383 HIRGVQKPK 391
>gi|190612673|gb|ACE80714.1| pentatricopeptide repeat protein [Haplomitrium mnioides]
Length = 152
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 56/84 (66%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
RLS AGY+P T V+ D+ +E K + SE+LA+A+GL+ST PG LRI KNLR
Sbjct: 58 RLSELMVQAGYVPDTRCVVHDVKEEEKVNQLCHHSEKLAIAFGLLSTVPGAPLRIYKNLR 117
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CHN K ++ I R+I+VRD
Sbjct: 118 VCIDCHNATKFITKIAGRDIVVRD 141
>gi|242072952|ref|XP_002446412.1| hypothetical protein SORBIDRAFT_06g015580 [Sorghum bicolor]
gi|241937595|gb|EES10740.1| hypothetical protein SORBIDRAFT_06g015580 [Sorghum bicolor]
Length = 317
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 71/122 (58%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
L+ L+ + + +G++PN TF+GV+ AC G V+EG +F+S++ Y +NPT +H+
Sbjct: 28 LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPTPDHYAC 87
Query: 107 IVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKD 166
+VD+ GR ++ AR F+ M I A ++VW TL + + +GE ++ L + D
Sbjct: 88 VVDILGRAGQLDRARRFVDEMPITADAMVWRTLLSACKVHKNIEIGELAAKHLLELEPHD 147
Query: 167 AG 168
+
Sbjct: 148 SA 149
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
L+++ GY + + +QE K+ SE+LAVA+GL++ PP LR+ KNLR+
Sbjct: 217 LNDRLAKIGYKQEKPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRV 276
Query: 220 CGECHNFIKKLSSIENREIIVRD 242
C +CH+++K S + REI++RD
Sbjct: 277 CDDCHSWMKFTSEVTRREIVLRD 299
>gi|383135459|gb|AFG48740.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135461|gb|AFG48741.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135463|gb|AFG48742.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135467|gb|AFG48744.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135469|gb|AFG48745.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135471|gb|AFG48746.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135473|gb|AFG48747.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135475|gb|AFG48748.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135479|gb|AFG48750.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135481|gb|AFG48751.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
gi|383135485|gb|AFG48753.1| Pinus taeda anonymous locus 0_2087_01 genomic sequence
Length = 95
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 55/77 (71%)
Query: 166 DAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHN 225
+ GY+P T +VL D+ +E K SE+LAVA+G+I+TPP +R+ KNLR+CG+CH+
Sbjct: 1 EEGYVPDTNFVLHDVGEEQKAHALHCHSEKLAVAFGIINTPPRTPIRVLKNLRVCGDCHS 60
Query: 226 FIKKLSSIENREIIVRD 242
IK +S + REII+RD
Sbjct: 61 VIKFISKVYEREIILRD 77
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 130/280 (46%), Gaps = 62/280 (22%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
A+EV ++K G+ + + +L+ C L+ G+ + GV P V ++
Sbjct: 294 AMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMV 353
Query: 73 TACGCFGAVDEGFQHFESVT-------------------RDYDI--------------NP 99
G G ++E +Q ++ +++D+ NP
Sbjct: 354 DMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISAEPENP 413
Query: 100 TLEHFLGIVDLY---GRLQKIAEAREFIRNMQID---ASSVVWETLEKYAQTEPGLL-LG 152
H++ + ++Y GR+ ++ E +RN+ I V + T++ + L +G
Sbjct: 414 G--HYVLLSNMYALAGRMDRV----ESVRNVMIQRGLKKQVGYSTID--VENRSYLFSMG 465
Query: 153 EPSSSL---------RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLI 203
+ S L + KDAGY P E + +L++E +E Y SE+LAVA+GL+
Sbjct: 466 DKSHPETNEIYCYLDELMWRCKDAGYAPAPESAMHELEEEEREYALRYHSEKLAVAFGLM 525
Query: 204 STPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRDK 243
T G TLRI KNLRIC +CH+ IK +S + NREIIVRDK
Sbjct: 526 KTCHGVTLRIVKNLRICEDCHSAIKFISVVMNREIIVRDK 565
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 47 LKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLG 106
++ +E R + GV PN T+V V++AC G ++EG F S+ ++Y + P +EH +
Sbjct: 292 VEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEHHVC 351
Query: 107 IVDLYGRLQKIAEAREFIRNMQI-DASSVVWETLEKYAQTEPGLLLG------------- 152
+VD++GR + EA +F+R + + VW + + LG
Sbjct: 352 MVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISAEPE 411
Query: 153 EPSSSLRLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRS 193
P + LSN AG M E V + Q +K Y +
Sbjct: 412 NPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYST 452
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 46/271 (16%)
Query: 18 ALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVGVI 72
A++++ + G+ + I + C +++ G R + GV P+ + V+
Sbjct: 515 AIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVV 574
Query: 73 TACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQ--KIAE----------A 120
G G + E +Q + RD++ LG ++ L+ +IA A
Sbjct: 575 DLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVA 634
Query: 121 REFIRNMQIDASSVVWETL--------EKYAQTEPG------------LLLGEPS--SSL 158
++ I +S+ +W+ E+ + EPG + G+ S S
Sbjct: 635 SHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSE 694
Query: 159 RLSN-------KKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTL 211
+LS + + GY+P T VL +++++ KE SE+LA+A+G+++T PG +
Sbjct: 695 KLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTII 754
Query: 212 RIKKNLRICGECHNFIKKLSSIENREIIVRD 242
R+ KNLR+C +CH K +S I +REII+RD
Sbjct: 755 RVAKNLRVCNDCHLATKFISKIVDREIILRD 785
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 13/148 (8%)
Query: 54 KRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGR 113
+ E +GVRP+ TFVG+++AC G +DEG F S+T +Y + P EH+ + DL GR
Sbjct: 547 REMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEEYSLKPVAEHYACMADLLGR 606
Query: 114 LQKIAEAREFIRNMQIDASSVVWETL----EKYAQTEPGLLLGEPSSSLR---------L 160
K+ EA E ++ MQI ++ VW L + Y E L E S L L
Sbjct: 607 AGKLNEAFELVQGMQIQPNAGVWGALLGACQMYKNHELARLAAEKLSELEPCRASNYVLL 666
Query: 161 SNKKKDAGYMPYTEYVLRDLDQEAKEKP 188
SN +AG E + ++ KP
Sbjct: 667 SNISAEAGKWDEAEKARASIKEKGANKP 694
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%)
Query: 164 KKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGEC 223
+ +AGY P VL D+++E KE + SE+LA A+G+ P GR LRI KNLR+CG+C
Sbjct: 544 RTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDC 603
Query: 224 HNFIKKLSSIENREIIVRDKT 244
H +K +S + EIIVRD++
Sbjct: 604 HTVMKLISKVYQVEIIVRDRS 624
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQK 116
E GVRP+ TF+ ++ AC G V+EG F + Y I P +EH+ +VDLYGR +
Sbjct: 360 EESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAAR 419
Query: 117 IAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAGYMPYTEYV 176
+ +A EFI M + ++++W TL + + E + RL+ D +
Sbjct: 420 LQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKA-RLAEMDPDNS---GDHVL 475
Query: 177 LRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR--ICGECHNFIKKLSSIE 234
L ++ A + R + + TP + I K + + GE N + + + +
Sbjct: 476 LSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEK 535
Query: 235 NREIIVRDKT 244
REI++R +T
Sbjct: 536 LREIMLRLRT 545
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 54/290 (18%)
Query: 3 NSELKHLCREREVKAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----E 57
N+ L ++ AL + D++ GI + + LL+ C L GKR +
Sbjct: 347 NTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQ 406
Query: 58 NDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPT---LEHFLGIVDLYGR- 113
+ GV+P+ + ++ G G DE SV + + P+ L LYG
Sbjct: 407 DFGVQPSLEHYACLVDILGRSGKFDEAL----SVAENIPMRPSGSIWGSLLNSCRLYGNV 462
Query: 114 -LQKIAEAREF----------IRNMQIDASSVVWETLEK-----------------YAQT 145
L ++ R F + I A++ +WE +++ + Q
Sbjct: 463 ALAEVVAERLFEIEPNNPGNYVMLSNIYANAGMWEDVKRVREMMALTGMKKDAGCSWIQI 522
Query: 146 EPGL--LLGEPSSSLR-----------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYR 192
+ + + SS R LSN K+ GY+P T VL D+++E K
Sbjct: 523 KHKIHTFVAGGSSDFRCSAEYKKIWNELSNAVKNLGYVPNTGVVLHDINEEMKAVWVCEH 582
Query: 193 SERLAVAYGLISTPPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
SERLA + LI+T G +RI KNLR+C +CH+++K +S + R I++RD
Sbjct: 583 SERLAAVFALINTGAGMPIRITKNLRVCVDCHSWMKAVSKVTRRLIVLRD 632
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
LS K+ GY+P VL D+D+E KEK SE+LA+++GLI++P +R+ KNLRI
Sbjct: 740 LSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRI 799
Query: 220 CGECHNFIKKLSSIENREIIVRDK 243
C +CHNF K +S + RE+ +RDK
Sbjct: 800 CVDCHNFAKYISKVYGREVSLRDK 823
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 57 ENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTR-DYDINPTLEHFLGIVDLYGRLQ 115
E V+P+ T + V++ C G D+G F ++ ++ P +EH+ +VDL GR
Sbjct: 560 EETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSG 619
Query: 116 KIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLSNKKKDAG 168
++ EA EFI+ M + ++ +W +L + + +GE + L + +AG
Sbjct: 620 RVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAG 672
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 45 MDLKLLEAGKRFENDGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHF 104
+D + LE +R + +G++ N+ T+ GV+TA A+D G Q V R +I +
Sbjct: 446 LDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRS-EIPSFVVLQ 504
Query: 105 LGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETL 139
++D+Y + + +R M + + + W +
Sbjct: 505 NSLIDMYSKCGNLTYSRRIFDTMY-ERTVISWNAM 538
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%)
Query: 159 RLSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLR 218
R+ ++ GY+P + VL + +EAKEK + SERLA+A+G+IS+P G LRI KNLR
Sbjct: 534 RIEGVIRERGYVPDIKAVLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTELRIMKNLR 593
Query: 219 ICGECHNFIKKLSSIENREIIVRD 242
+C +CH+ K +S R+IIVRD
Sbjct: 594 VCPDCHSATKIISKFSGRKIIVRD 617
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 15/186 (8%)
Query: 47 LKLLEAGKRFEND-----GVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTL 101
+ LE KR + G+ + TF+GV+ AC G V + + + S+ DY PT
Sbjct: 341 FQALEIYKRMQESRMTILGITHDDITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTS 400
Query: 102 EHFLGIVDLYGRLQKIAEAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS 161
++DL GR + EA EFI +M +W L T + ++ ++
Sbjct: 401 LQCGCLIDLLGRAGWLDEAEEFINSMPYHPDHTIWTILLGACITHADVERAARAADRIMA 460
Query: 162 NKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICG 221
+ D+G + L +L A+ R +L G+ K ++ I G
Sbjct: 461 LRPTDSG----SYVALSNLYALAERWDDMARMRKLMDQRGVFKMAG------KSSIEIGG 510
Query: 222 ECHNFI 227
H FI
Sbjct: 511 VLHEFI 516
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 125/277 (45%), Gaps = 56/277 (20%)
Query: 16 KAALEVMDKLKNIGIFLDSPDIIELLNVCMDLKLLEAGKRF-----ENDGVRPNWSTFVG 70
+ AL++ ++++N + + + ++ C L+E G + EN G+ P +
Sbjct: 528 REALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGA 587
Query: 71 VITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIAEAREFIRNMQID 130
++ G G +D+ ++ + D + P + LG + R+ K E E + D
Sbjct: 588 MVDLLGRAGRLDDAWKFIQ----DMPVKPGIT-VLGAMLGACRIHKNVELGEKTADELFD 642
Query: 131 ----------------ASSVVWETL--------EKYAQTEPGLLLGEPSSSLR------- 159
AS+ +W+ + +K Q PG L E + +
Sbjct: 643 LDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGST 702
Query: 160 --------------LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLIST 205
L ++ K AGY+P T + D++++ KE+ + SERLA+A+GL++T
Sbjct: 703 NHPQSKRIYAYLETLGDEMKAAGYVPDTNSI-HDVEEDVKEQLLSSHSERLAIAFGLLNT 761
Query: 206 PPGRTLRIKKNLRICGECHNFIKKLSSIENREIIVRD 242
G + I+KNLR+CG+CH K +S + REIIVRD
Sbjct: 762 RHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRD 798
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 57/85 (67%)
Query: 160 LSNKKKDAGYMPYTEYVLRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRI 219
+ + K AGY P T + D+D+E KE+ SE+LA+A+GL+S P + I KNLR+
Sbjct: 642 IGRRLKSAGYSPITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRV 701
Query: 220 CGECHNFIKKLSSIENREIIVRDKT 244
C +CH+ IK +S + NREIIVRD++
Sbjct: 702 CEDCHSAIKLISRLWNREIIVRDRS 726
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 59 DGVRPNWSTFVGVITACGCFGAVDEGFQHFESVTRDYDINPTLEHFLGIVDLYGRLQKIA 118
DG N T++ V+TAC +DEG +F+ + ++I P +EH+ ++DL GR +
Sbjct: 465 DGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLD 524
Query: 119 EAREFIRNMQIDASSVVWETLEKYAQTEPGLLLGEPSSSLRLS-NKKKDAGYMP-YTEYV 176
EA + ++ M + ++V+W ++ + + L + ++ L +DA Y+ Y Y+
Sbjct: 525 EAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYI 584
Query: 177 LRDLDQEAKEKPQTYRSERLAVAYGLISTPPGRTLRIKKNLRICGECHNFI 227
++++ + RL G+ T ++ + G+ H FI
Sbjct: 585 ------DSRQWEDASKIRRLMEKRGVKKTAG------YSSIAVAGQVHKFI 623
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.138 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,832,704,983
Number of Sequences: 23463169
Number of extensions: 157744773
Number of successful extensions: 397301
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5460
Number of HSP's successfully gapped in prelim test: 550
Number of HSP's that attempted gapping in prelim test: 382465
Number of HSP's gapped (non-prelim): 14333
length of query: 245
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 106
effective length of database: 9,097,814,876
effective search space: 964368376856
effective search space used: 964368376856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)