BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043267
(614 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 132/326 (40%), Positives = 187/326 (57%), Gaps = 15/326 (4%)
Query: 277 RSKKSEERVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYK 336
R KK ++ V ++P + L L RF + E++ A+ NFS +NI+G+GG+G VYK
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHL----GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYK 56
Query: 337 GMLPNGTEVAVKRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRI 395
G L +GT VAVKR K + G+ F+ EVE+I+ H NL+ LRG+ +R+
Sbjct: 57 GRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-----ERL 111
Query: 396 IVCDLLHNGSLYDHLFG--SGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKAS 453
+V + NGS+ L L WP R RIALG+ARGLAYLH P IIHRD+KA+
Sbjct: 112 LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAA 171
Query: 454 NILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGV 513
NILLDE FEA VGDFGLAK H+ V GT+G++APEY GK + +DV+ +GV
Sbjct: 172 NILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGV 231
Query: 514 VLLELLSGKKACEIIQ---GKSVLLSDWAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVL 570
+LLEL++G++A ++ + V+L DW L+KE K ++ Q +
Sbjct: 232 MLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQ 291
Query: 571 TAAICAHPILQARPTMDQIVKILETD 596
A +C RP M ++V++LE D
Sbjct: 292 VALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 174/300 (58%), Gaps = 11/300 (3%)
Query: 303 SNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKN-CSKAGDANF 361
L RF + E++ A+ NF +NI+G+GG+G VYKG L +G VAVKR K ++ G+ F
Sbjct: 15 GQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQF 74
Query: 362 KHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG--SGMKKLS 419
+ EVE+I+ H NL+ LRG+ +R++V + NGS+ L L
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMTPT-----ERLLVYPYMANGSVASCLRERPESQPPLD 129
Query: 420 WPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT 479
WP R RIALG+ARGLAYLH P IIHRD+KA+NILLDE FEA VGDFGLAK
Sbjct: 130 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 189
Query: 480 HLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQ---GKSVLLS 536
H+ V G +G++APEY GK + +DV+ +GV+LLEL++G++A ++ + V+L
Sbjct: 190 HVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
Query: 537 DWAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILETD 596
DW L+KE K ++ Q + A +C RP M ++V++LE D
Sbjct: 250 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 168/294 (57%), Gaps = 16/294 (5%)
Query: 307 RFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVE 366
R + +++ AT NF + +IG G +G VYKG+L +G +VA+KR S G F+ E+E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 367 IIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMK--KLSWPIRL 424
++ +H +LV+L G+ E ++ I++ + NG+L HL+GS + +SW RL
Sbjct: 88 TLSFCRHPHLVSLIGFCD-----ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 425 RIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE-GITHLTT 483
I +G ARGL YLH AIIHRD+K+ NILLDE F K+ DFG++K E G THL
Sbjct: 143 EICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXX 199
Query: 484 RVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQG---KSVLLSDWAW 540
V GTLGY+ PEY + G+LT SDVYSFGVVL E+L + A I+Q + V L++WA
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA--IVQSLPREMVNLAEWAV 257
Query: 541 ELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
E G+ ++ ++ TA C + RP+M ++ LE
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/294 (39%), Positives = 167/294 (56%), Gaps = 16/294 (5%)
Query: 307 RFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVE 366
R + +++ AT NF + +IG G +G VYKG+L +G +VA+KR S G F+ E+E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 367 IIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMK--KLSWPIRL 424
++ +H +LV+L G+ E ++ I++ + NG+L HL+GS + +SW RL
Sbjct: 88 TLSFCRHPHLVSLIGFCD-----ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 425 RIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE-GITHLTT 483
I +G ARGL YLH AIIHRD+K+ NILLDE F K+ DFG++K E THL
Sbjct: 143 EICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXX 199
Query: 484 RVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQG---KSVLLSDWAW 540
V GTLGY+ PEY + G+LT SDVYSFGVVL E+L + A I+Q + V L++WA
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA--IVQSLPREMVNLAEWAV 257
Query: 541 ELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
E G+ ++ ++ TA C + RP+M ++ LE
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 164/309 (53%), Gaps = 23/309 (7%)
Query: 298 LESRSSNLARFKIEEIKAATMNFSRE------NIIGKGGYGNVYKGMLPNGTEVAVKRFK 351
LE + F E+K T NF N +G+GG+G VYKG + N T VAVK+
Sbjct: 5 LEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLA 63
Query: 352 N----CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLY 407
++ F E++++A +H NLV L G+S+ +G +V + NGSL
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS-----DGDDLCLVYVYMPNGSLL 118
Query: 408 DHLFG-SGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVG 466
D L G LSW +R +IA G A G+ +LH + IHRDIK++NILLDEAF AK+
Sbjct: 119 DRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKIS 175
Query: 467 DFGLAKFNPE-GITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKAC 525
DFGLA+ + + T + +R+ GT Y+APE AL G++TP SD+YSFGVVLLE+++G A
Sbjct: 176 DFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAV 234
Query: 526 EIIQGKSVLLSDWAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPT 585
+ + +LL +E D I Y + A+ C H RP
Sbjct: 235 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSV-ASQCLHEKKNKRPD 293
Query: 586 MDQIVKILE 594
+ ++ ++L+
Sbjct: 294 IKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 163/309 (52%), Gaps = 23/309 (7%)
Query: 298 LESRSSNLARFKIEEIKAATMNFSRE------NIIGKGGYGNVYKGMLPNGTEVAVKRFK 351
LE + F E+K T NF N +G+GG+G VYKG + N T VAVK+
Sbjct: 5 LEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLA 63
Query: 352 N----CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLY 407
++ F E++++A +H NLV L G+S+ +G +V + NGSL
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS-----DGDDLCLVYVYMPNGSLL 118
Query: 408 DHLFG-SGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVG 466
D L G LSW +R +IA G A G+ +LH + IHRDIK++NILLDEAF AK+
Sbjct: 119 DRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKIS 175
Query: 467 DFGLAKFNPE-GITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKAC 525
DFGLA+ + + T + R+ GT Y+APE AL G++TP SD+YSFGVVLLE+++G A
Sbjct: 176 DFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAV 234
Query: 526 EIIQGKSVLLSDWAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPT 585
+ + +LL +E D I Y + A+ C H RP
Sbjct: 235 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSV-ASQCLHEKKNKRPD 293
Query: 586 MDQIVKILE 594
+ ++ ++L+
Sbjct: 294 IKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 159/299 (53%), Gaps = 23/299 (7%)
Query: 308 FKIEEIKAATMNFSRE------NIIGKGGYGNVYKGMLPNGTEVAVKRFKN----CSKAG 357
F E+K T NF N +G+GG+G VYKG + N T VAVK+ ++
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 358 DANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG-SGMK 416
F E++++A +H NLV L G+S+ +G +V + NGSL D L G
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSS-----DGDDLCLVYVYMPNGSLLDRLSCLDGTP 122
Query: 417 KLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE 476
LSW +R +IA G A G+ +LH + IHRDIK++NILLDEAF AK+ DFGLA+ + +
Sbjct: 123 PLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEK 179
Query: 477 -GITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKSVLL 535
+ R+ GT Y+APE AL G++TP SD+YSFGVVLLE+++G A + + +LL
Sbjct: 180 FAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 238
Query: 536 SDWAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+E D I Y + A+ C H RP + ++ ++L+
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSV-ASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 156/299 (52%), Gaps = 23/299 (7%)
Query: 308 FKIEEIKAATMNFSRE------NIIGKGGYGNVYKGMLPNGTEVAVKRFKN----CSKAG 357
F E+K T NF N G+GG+G VYKG + N T VAVK+ ++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 358 DANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG-SGMK 416
F E+++ A +H NLV L G+S+ +G +V NGSL D L G
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSS-----DGDDLCLVYVYXPNGSLLDRLSCLDGTP 119
Query: 417 KLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE 476
LSW R +IA G A G+ +LH + IHRDIK++NILLDEAF AK+ DFGLA+ + +
Sbjct: 120 PLSWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 477 GITHL-TTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKSVLL 535
+ +R+ GT Y APE AL G++TP SD+YSFGVVLLE+++G A + + +LL
Sbjct: 177 FAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 235
Query: 536 SDWAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+E D I Y + A+ C H RP + ++ ++L+
Sbjct: 236 DIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSV-ASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 108/206 (52%), Gaps = 24/206 (11%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G VYKG V + + FK+EV ++ +HVN++ GYSTA
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSG----MKKLSWPIRLRIALGTARGLAYLHYGV 441
Q IV SLY HL S MKKL + IA TARG+ YLH
Sbjct: 92 P------QLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH--- 137
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFGLA--KFNPEGITHLTTRVAGTLGYVAPEYALY 499
+IIHRD+K++NI L E K+GDFGLA K G +H +++G++ ++APE
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRM 196
Query: 500 GKLTP---GSDVYSFGVVLLELLSGK 522
P SDVY+FG+VL EL++G+
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 105/205 (51%), Gaps = 22/205 (10%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G VYKG V + + FK+EV ++ +HVN++ GYST
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSG----MKKLSWPIRLRIALGTARGLAYLHYGV 441
Q IV SLY HL S MKKL + IA TARG+ YLH
Sbjct: 80 P------QLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH--- 125
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE-GITHLTTRVAGTLGYVAPEYALYG 500
+IIHRD+K++NI L E K+GDFGLA +H +++G++ ++APE
Sbjct: 126 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 501 KLTP---GSDVYSFGVVLLELLSGK 522
P SDVY+FG+VL EL++G+
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 107/206 (51%), Gaps = 24/206 (11%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G VYKG V + + FK+EV ++ +HVN++ GYST
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSG----MKKLSWPIRLRIALGTARGLAYLHYGV 441
Q IV SLY HL S MKKL + IA TARG+ YLH
Sbjct: 92 P------QLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH--- 137
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFGLA--KFNPEGITHLTTRVAGTLGYVAPEYALY 499
+IIHRD+K++NI L E K+GDFGLA K G +H +++G++ ++APE
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRM 196
Query: 500 GKLTP---GSDVYSFGVVLLELLSGK 522
P SDVY+FG+VL EL++G+
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 22/205 (10%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G VYKG V + + FK+EV ++ +HVN++ GYSTA
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLF----GSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
Q IV SLY HL M KL + IA TA+G+ YLH
Sbjct: 76 P------QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH--- 121
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGI-THLTTRVAGTLGYVAPEYALYG 500
+IIHRD+K++NI L E K+GDFGLA +H +++G++ ++APE
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 501 KLTP---GSDVYSFGVVLLELLSGK 522
P SDVY+FG+VL EL++G+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 118/228 (51%), Gaps = 28/228 (12%)
Query: 320 FSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDA----NFKHEVEIIASVKHVN 375
+ E IIG GG+G VY+ G EVAVK ++ + N + E ++ A +KH N
Sbjct: 9 LTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
++ALRG V L+ +V + G L L G K++ I + A+ ARG+
Sbjct: 68 IIALRG-----VCLKEPNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMN 119
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFE--------AKVGDFGLAKFNPEGITHLTTRV-- 485
YLH IIHRD+K+SNIL+ + E K+ DFGLA+ H TT++
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE-----WHRTTKMSA 174
Query: 486 AGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKSV 533
AG ++APE + GSDV+S+GV+L ELL+G+ I G +V
Sbjct: 175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV 222
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 22/205 (10%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G VYKG V + + FK+EV ++ +HVN++ GYST
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLF----GSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
Q IV SLY HL M KL + IA TA+G+ YLH
Sbjct: 78 P------QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH--- 123
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGI-THLTTRVAGTLGYVAPEYALYG 500
+IIHRD+K++NI L E K+GDFGLA +H +++G++ ++APE
Sbjct: 124 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 501 KLTP---GSDVYSFGVVLLELLSGK 522
P SDVY+FG+VL EL++G+
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 22/205 (10%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G VYKG V + + FK+EV ++ +HVN++ GYST
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLF----GSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
Q IV SLY HL M KL + IA TA+G+ YLH
Sbjct: 76 P------QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH--- 121
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGI-THLTTRVAGTLGYVAPEYALYG 500
+IIHRD+K++NI L E K+GDFGLA +H +++G++ ++APE
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 501 KLTP---GSDVYSFGVVLLELLSGK 522
P SDVY+FG+VL EL++G+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 103/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IVC+ + GSL D L G K L P + +A A G+AY+ +
Sbjct: 85 E-PI-----YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 22/205 (10%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G VYKG V + + FK+EV ++ +HVN++ GYST
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLF----GSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
Q IV SLY HL M KL + IA TA+G+ YLH
Sbjct: 81 P------QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH--- 126
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE-GITHLTTRVAGTLGYVAPEYALYG 500
+IIHRD+K++NI L E K+GDFGLA +H +++G++ ++APE
Sbjct: 127 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 501 KLTP---GSDVYSFGVVLLELLSGK 522
P SDVY+FG+VL EL++G+
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 22/205 (10%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G VYKG V + + FK+EV ++ +HVN++ GYST
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLF----GSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
Q IV SLY HL M KL + IA TA+G+ YLH
Sbjct: 81 P------QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH--- 126
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE-GITHLTTRVAGTLGYVAPEYALYG 500
+IIHRD+K++NI L E K+GDFGLA +H +++G++ ++APE
Sbjct: 127 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 501 KLTP---GSDVYSFGVVLLELLSGK 522
P SDVY+FG+VL EL++G+
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G VYKG V + + FK+EV ++ +HVN++ GYST
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLF----GSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
Q IV SLY HL M KL + IA TA+G+ YLH
Sbjct: 76 P------QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH--- 121
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFGLA--KFNPEGITHLTTRVAGTLGYVAPEYALY 499
+IIHRD+K++NI L E K+GDFGLA K G +H +++G++ ++APE
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRM 180
Query: 500 GKLTP---GSDVYSFGVVLLELLSGK 522
P SDVY+FG+VL EL++G+
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 22/205 (10%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G VYKG V + + FK+EV ++ +HVN++ GYST
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLF----GSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
Q IV SLY HL M KL + IA TA+G+ YLH
Sbjct: 103 P------QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH--- 148
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE-GITHLTTRVAGTLGYVAPEYALYG 500
+IIHRD+K++NI L E K+GDFGLA +H +++G++ ++APE
Sbjct: 149 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 501 KLTP---GSDVYSFGVVLLELLSGK 522
P SDVY+FG+VL EL++G+
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G VYKG V + + FK+EV ++ +HVN++ GYST
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLF----GSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
Q IV SLY HL M KL + IA TA+G+ YLH
Sbjct: 96 P------QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH--- 141
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFGLA--KFNPEGITHLTTRVAGTLGYVAPEYALY 499
+IIHRD+K++NI L E K+GDFGLA K G +H +++G++ ++APE
Sbjct: 142 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRM 200
Query: 500 GKLTP---GSDVYSFGVVLLELLSGK 522
P SDVY+FG+VL EL++G+
Sbjct: 201 QDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 22/205 (10%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G VYKG V + + FK+EV ++ +HVN++ GYST
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLF----GSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
Q IV SLY HL M KL + IA TA+G+ YLH
Sbjct: 104 P------QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH--- 149
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE-GITHLTTRVAGTLGYVAPEYALYG 500
+IIHRD+K++NI L E K+GDFGLA +H +++G++ ++APE
Sbjct: 150 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 501 KLTP---GSDVYSFGVVLLELLSGK 522
P SDVY+FG+VL EL++G+
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G VYKG V + + FK+EV ++ +HVN++ GYST
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLF----GSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
Q IV SLY HL M KL + IA TA+G+ YLH
Sbjct: 104 P------QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLH--- 149
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFGLA--KFNPEGITHLTTRVAGTLGYVAPEYALY 499
+IIHRD+K++NI L E K+GDFGLA K G +H +++G++ ++APE
Sbjct: 150 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRM 208
Query: 500 GKLTP---GSDVYSFGVVLLELLSGK 522
P SDVY+FG+VL EL++G+
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + GSL D L G K L P + +A A G+AY+ +
Sbjct: 75 E-PI-----XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 125
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 186 SDVWSFGILLTELTT 200
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV-VS 249
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + GSL D L G K L P + +A A G+AY+ +
Sbjct: 250 EEPI-----YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 301
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 362 SDVWSFGILLTELTT 376
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV-VS 249
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + GSL D L G K L P + +A A G+AY+ +
Sbjct: 250 EEPI-----YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 301
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 362 SDVWSFGILLTELTT 376
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + GSL D L G K L P + +A A G+AY+ +
Sbjct: 78 E-PI-----YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 128
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 189 SDVWSFGILLTELTT 203
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + GSL D L G K L P + +A A G+AY+ +
Sbjct: 85 E-PI-----YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 103/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + ++ GSL D L G K L P + ++ A G+AY+ +
Sbjct: 82 E-PI-----YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNY 132
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 193 SDVWSFGILLTELTT 207
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + GSL D L G K L P + +A A G+AY+ +
Sbjct: 76 E-PI-----YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 126
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 187 SDVWSFGILLTELTT 201
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV 371
EI+A+ + S IG G +G VYKG V + + + + F++EV ++
Sbjct: 32 EIEASEVMLSTR--IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTA 431
+HVN++ GY T IV SLY HL K + + + IA TA
Sbjct: 90 RHVNILLFMGYMTKD------NLAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIARQTA 142
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE-GITHLTTRVAGTLG 490
+G+ YLH IIHRD+K++NI L E K+GDFGLA + + G++
Sbjct: 143 QGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL 199
Query: 491 YVAPEYALYGKLTP---GSDVYSFGVVLLELLSGK 522
++APE P SDVYS+G+VL EL++G+
Sbjct: 200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + GSL D L G K L P + +A A G+AY+ +
Sbjct: 85 E-PI-----YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + GSL D L G K L P + +A A G+AY+ +
Sbjct: 74 E-PI-----YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 124
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 185 SDVWSFGILLTELTT 199
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 103/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + ++ GSL D L G K L P + ++ A G+AY+ +
Sbjct: 82 E-PI-----YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNY 132
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 193 SDVWSFGILLTELTT 207
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 106/197 (53%), Gaps = 13/197 (6%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDA--NFKHEVEIIASVKHVNLVALRGYS 383
IG G +G V++ +G++VAVK + F EV I+ ++H N+V G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMK-KLSWPIRLRIALGTARGLAYLHYGVQ 442
T L IV + L GSLY L SG + +L RL +A A+G+ YLH
Sbjct: 104 TQPPNLS-----IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRN 157
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR-VAGTLGYVAPEYALYGK 501
P I+HR++K+ N+L+D+ + KV DFGL++ + T L+++ AGT ++APE
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 502 LTPGSDVYSFGVVLLEL 518
SDVYSFGV+L EL
Sbjct: 216 SNEKSDVYSFGVILWEL 232
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV-VS 249
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + GSL D L G K L P + +A A G+AY+ +
Sbjct: 250 EEPI-----YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 301
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 362 SDVWSFGILLTELTT 376
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + GSL D L G K L P + +A A G+AY+ +
Sbjct: 85 E-PI-----YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDA--NFKHEVEIIASVKHVNLVALRGYS 383
IG G +G V++ +G++VAVK + F EV I+ ++H N+V G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMK-KLSWPIRLRIALGTARGLAYLHYGVQ 442
T L IV + L GSLY L SG + +L RL +A A+G+ YLH
Sbjct: 104 TQPPNLS-----IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRN 157
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKL 502
P I+HRD+K+ N+L+D+ + KV DFGL++ + AGT ++APE
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFL-XSKXAAGTPEWMAPEVLRDEPS 216
Query: 503 TPGSDVYSFGVVLLEL 518
SDVYSFGV+L EL
Sbjct: 217 NEKSDVYSFGVILWEL 232
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + GSL D L G K L P + +A A G+AY+ +
Sbjct: 85 E-PI-----YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV-VS 332
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + GSL D L G K L P + +A A G+AY+ +
Sbjct: 333 EEPI-----YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 384
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 445 SDVWSFGILLTELTT 459
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + GSL D L G K L P + +A A G+AY+ +
Sbjct: 85 E-PI-----YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD+ A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLYAV-VS 250
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + GSL D L G K L P + +A A G+AY+ +
Sbjct: 251 EEPI-----YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 302
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGL + + + + APE ALYG+ T
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 363 SDVWSFGILLTELTT 377
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + G L D L G K L P + +A A G+AY+ +
Sbjct: 85 E-PI-----YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G+G +G V+ G T VA+K K + + +A F E +++ ++H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + + G L D L G K L P + +A A G+AY+ +
Sbjct: 85 E-PI-----YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
+HRD++A+NIL+ E KV DFGLA+ + + + APE ALYG+ T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G +G V+ G T+VA+K K + + ++ F E +I+ +KH LV L +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ IV + ++ GSL D L + L P + +A A G+AY+ +
Sbjct: 76 E-PI-----YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNY 126
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHRD++++NIL+ K+ DFGLA+ + + + APE ALYG+ T
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L EL++
Sbjct: 187 SDVWSFGILLTELVT 201
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G +G V+ G T+VAVK K S + DA F E ++ ++H LV L T
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ I+ + + NGSL D L KL+ L +A A G+A++ +
Sbjct: 81 E-PI-----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 131
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHRD++A+NIL+ + K+ DFGLA+ + + + APE YG T
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 506 SDVYSFGVVLLELLS-------GKKACEIIQ 529
SDV+SFG++L E+++ G E+IQ
Sbjct: 192 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 222
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G +G V+ G T+VAVK K S + DA F E ++ ++H LV L T
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ I+ + + NGSL D L KL+ L +A A G+A++ +
Sbjct: 86 E-PI-----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 136
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHRD++A+NIL+ + K+ DFGLA+ + + + APE YG T
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 506 SDVYSFGVVLLELLS-------GKKACEIIQ 529
SDV+SFG++L E+++ G E+IQ
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 227
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G +G V+ G T+VAVK K S + DA F E ++ ++H LV L T
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ I+ + + NGSL D L KL+ L +A A G+A++ +
Sbjct: 82 E-PI-----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 132
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHRD++A+NIL+ + K+ DFGLA+ + + + APE YG T
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 506 SDVYSFGVVLLELLS-------GKKACEIIQ 529
SDV+SFG++L E+++ G E+IQ
Sbjct: 193 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 223
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G +G V+ G T+VAVK K S + DA F E ++ ++H LV L T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ I+ + + NGSL D L KL+ L +A A G+A++ +
Sbjct: 80 E-PI-----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 130
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHRD++A+NIL+ + K+ DFGLA+ + + + APE YG T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 506 SDVYSFGVVLLELLS-------GKKACEIIQ 529
SDV+SFG++L E+++ G E+IQ
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G +G V+ G T+VAVK K S + DA F E ++ ++H LV L T
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ I+ + + NGSL D L KL+ L +A A G+A++ +
Sbjct: 89 E-PI-----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 139
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHRD++A+NIL+ + K+ DFGLA+ + + + APE YG T
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 506 SDVYSFGVVLLELLS-------GKKACEIIQ 529
SDV+SFG++L E+++ G E+IQ
Sbjct: 200 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 230
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G +G V+ G T+VAVK K S + DA F E ++ ++H LV L T
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ I+ + + NGSL D L KL+ L +A A G+A++ +
Sbjct: 88 E-PI-----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 138
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHRD++A+NIL+ + K+ DFGLA+ + + + APE YG T
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 506 SDVYSFGVVLLELLS-------GKKACEIIQ 529
SDV+SFG++L E+++ G E+IQ
Sbjct: 199 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 229
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G +G V+ G T+VAVK K S + DA F E ++ ++H LV L T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ I+ + + NGSL D L KL+ L +A A G+A++ +
Sbjct: 80 E-PI-----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 130
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHRD++A+NIL+ + K+ DFGLA+ + + + APE YG T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 506 SDVYSFGVVLLELLS-------GKKACEIIQ 529
SDV+SFG++L E+++ G E+IQ
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G +G V+ G T+VAVK K S + DA F E ++ ++H LV L T
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ I+ + + NGSL D L KL+ L +A A G+A++ +
Sbjct: 86 E-PI-----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 136
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHRD++A+NIL+ + K+ DFGLA+ + + + APE YG T
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 506 SDVYSFGVVLLELLS-------GKKACEIIQ 529
SDV+SFG++L E+++ G E+IQ
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 227
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G +G V+ G T+VAVK K S + DA F E ++ ++H LV L T
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ I+ + + NGSL D L KL+ L +A A G+A++ +
Sbjct: 85 E-PI-----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 135
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHRD++A+NIL+ + K+ DFGLA+ + + + APE YG T
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 506 SDVYSFGVVLLELLS-------GKKACEIIQ 529
SDV+SFG++L E+++ G E+IQ
Sbjct: 196 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 226
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G +G V+ G T+VAVK K S + DA F E ++ ++H LV L T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ I+ + + NGSL D L KL+ L +A A G+A++ +
Sbjct: 80 E-PI-----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 130
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHRD++A+NIL+ + K+ DFGLA+ + + + APE YG T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 506 SDVYSFGVVLLELLS-------GKKACEIIQ 529
SDV+SFG++L E+++ G E+IQ
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G +G V+ G T+VAVK K S + DA F E ++ ++H LV L T
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ I+ + + NGSL D L KL+ L +A A G+A++ +
Sbjct: 75 E-PI-----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 125
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHRD++A+NIL+ + K+ DFGLA+ + + + APE YG T
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 506 SDVYSFGVVLLELLS-------GKKACEIIQ 529
SDV+SFG++L E+++ G E+IQ
Sbjct: 186 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G +G V+ G T+VAVK K S + DA F E ++ ++H LV L T
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ I+ + + NGSL D L KL+ L +A A G+A++ +
Sbjct: 90 E-PI-----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 140
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHRD++A+NIL+ + K+ DFGLA+ + + + APE YG T
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 506 SDVYSFGVVLLELLS-------GKKACEIIQ 529
SDV+SFG++L E+++ G E+IQ
Sbjct: 201 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 231
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 17/211 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G G V+ G T+VAVK K S + DA F E ++ ++H LV L T
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ I+ + + NGSL D L KL+ L +A A G+A++ +
Sbjct: 80 E-PI-----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 130
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHRD++A+NIL+ + K+ DFGLA+ + + + APE YG T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 506 SDVYSFGVVLLELLS-------GKKACEIIQ 529
SDV+SFG++L E+++ G E+IQ
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 221
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 9/195 (4%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G +G V+ G N T+VAVK K + + A F E ++ +++H LV L T
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ I+ + + GSL D L K+ P + + A G+AY+ +
Sbjct: 80 EEPI-----YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNY 131
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHRD++A+N+L+ E+ K+ DFGLA+ + + + APE +G T
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 506 SDVYSFGVVLLELLS 520
SDV+SFG++L E+++
Sbjct: 192 SDVWSFGILLYEIVT 206
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
+G G +G V+ G T+VAVK K S + DA F E ++ ++H LV L T
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
P+ I+ + + NGSL D L KL+ L +A A G+A++ +
Sbjct: 76 E-PI-----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 126
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
IHR+++A+NIL+ + K+ DFGLA+ + + + APE YG T
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 506 SDVYSFGVVLLELLS-------GKKACEIIQ 529
SDV+SFG++L E+++ G E+IQ
Sbjct: 187 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ 217
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 321 SRENIIGKGGYGNVYKGMLPNGT-----EVAVKRFK-NCSKAGDANFKHEVEIIASVKHV 374
+R+ +IG G +G VYKGML + VA+K K ++ +F E I+ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
N++ L G + P+ +I+ + + NG+L D + S + + G A G+
Sbjct: 107 NIIRLEGVISKYKPM-----MIITEYMENGAL-DKFLREKDGEFSVLQLVGMLRGIAAGM 160
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTTRVAGTLGY 491
YL +HRD+ A NIL++ KV DFGL++ +PE T+ T+ + +
Sbjct: 161 KYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-TYTTSGGKIPIRW 216
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLS 520
APE Y K T SDV+SFG+V+ E+++
Sbjct: 217 TAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 14/204 (6%)
Query: 322 RENI-----IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNL 376
RE+I +G G +G V+ G N T+VAVK K + + A F E ++ +++H L
Sbjct: 11 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKL 69
Query: 377 VALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY 436
V L T P+ I+ + + GSL D L K+ P + + A G+AY
Sbjct: 70 VRLYAVVTKEEPI-----YIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAY 124
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEY 496
+ + IHRD++A+N+L+ E+ K+ DFGLA+ + + + APE
Sbjct: 125 IE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 181
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
+G T S+V+SFG++L E+++
Sbjct: 182 INFGCFTIKSNVWSFGILLYEIVT 205
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ ++ +F+ E+EI+ S++H N+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 381 G--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
G YS L+ ++ + L GSL D+L +++ L+ +G+ YL
Sbjct: 81 GVCYSAGRRNLK-----LIMEYLPYGSLRDYLQAHA-ERIDHIKLLQYTSQICKGMEYL- 133
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEY 496
G + IHRD+ NIL++ K+GDFGL K P+ + G + + APE
Sbjct: 134 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
K + SDV+SFGVVL EL +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 323 ENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
E +G G +G V+ T+VAVK K S + +A F E ++ +++H LV L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV 78
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
T P+ I+ + + GSL D L K P + + A G+A++ Q
Sbjct: 79 VTKE-PI-----YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---Q 129
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKL 502
IHRD++A+NIL+ + K+ DFGLA+ + + + APE +G
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 189
Query: 503 TPGSDVYSFGVVLLELLS 520
T SDV+SFG++L+E+++
Sbjct: 190 TIKSDVWSFGILLMEIVT 207
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ ++ +F+ E+EI+ S++H N+V +
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 381 G--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
G YS L+ ++ + L GSL D+L +++ L+ +G+ YL
Sbjct: 82 GVCYSAGRRNLK-----LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 134
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEY 496
G + IHRD+ NIL++ K+GDFGL K P+ + G + + APE
Sbjct: 135 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
K + SDV+SFGVVL EL +
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ ++ +F+ E+EI+ S++H N+V +
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 381 G--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
G YS L+ ++ + L GSL D+L +++ L+ +G+ YL
Sbjct: 77 GVCYSAGRRNLK-----LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 129
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEY 496
G + IHRD+ NIL++ K+GDFGL K P+ + G + + APE
Sbjct: 130 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
K + SDV+SFGVVL EL +
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ ++ +F+ E+EI+ S++H N+V +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 381 G--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
G YS L+ ++ + L GSL D+L +++ L+ +G+ YL
Sbjct: 78 GVCYSAGRRNLK-----LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEY 496
G + IHRD+ NIL++ K+GDFGL K P+ + G + + APE
Sbjct: 131 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
K + SDV+SFGVVL EL +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ ++ +F+ E+EI+ S++H N+V +
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 381 G--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
G YS L+ ++ + L GSL D+L +++ L+ +G+ YL
Sbjct: 76 GVCYSAGRRNLK-----LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 128
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEY 496
G + IHRD+ NIL++ K+GDFGL K P+ + G + + APE
Sbjct: 129 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
K + SDV+SFGVVL EL +
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ ++ +F+ E+EI+ S++H N+V +
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 381 G--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
G YS L+ ++ + L GSL D+L +++ L+ +G+ YL
Sbjct: 109 GVCYSAGRRNLK-----LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 161
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEY 496
G + IHRD+ NIL++ K+GDFGL K P+ + G + + APE
Sbjct: 162 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
K + SDV+SFGVVL EL +
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ ++ +F+ E+EI+ S++H N+V +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 381 G--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
G YS L+ ++ + L GSL D+L +++ L+ +G+ YL
Sbjct: 78 GVCYSAGRRNLK-----LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEY 496
G + IHRD+ NIL++ K+GDFGL K P+ + G + + APE
Sbjct: 131 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
K + SDV+SFGVVL EL +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ ++ +F+ E+EI+ S++H N+V +
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 381 G--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
G YS L+ ++ + L GSL D+L +++ L+ +G+ YL
Sbjct: 83 GVCYSAGRRNLK-----LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 135
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEY 496
G + IHRD+ NIL++ K+GDFGL K P+ + G + + APE
Sbjct: 136 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
K + SDV+SFGVVL EL +
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ ++ +F+ E+EI+ S++H N+V +
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 381 G--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
G YS L+ ++ + L GSL D+L +++ L+ +G+ YL
Sbjct: 84 GVCYSAGRRNLK-----LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 136
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEY 496
G + IHRD+ NIL++ K+GDFGL K P+ + G + + APE
Sbjct: 137 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
K + SDV+SFGVVL EL +
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ ++ +F+ E+EI+ S++H N+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 381 G--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
G YS L+ ++ + L GSL D+L +++ L+ +G+ YL
Sbjct: 81 GVCYSAGRRNLK-----LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 133
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEY 496
G + IHRD+ NIL++ K+GDFGL K P+ + G + + APE
Sbjct: 134 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
K + SDV+SFGVVL EL +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 25/228 (10%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKA 356
S N+ +F+ +K +GKG +G+V Y + N G VAVK+ ++ ++
Sbjct: 19 SHNMTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE 71
Query: 357 GDANFKHEVEIIASVKHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSG 414
+F+ E+EI+ S++H N+V +G YS L+ ++ + L GSL D+L
Sbjct: 72 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK-----LIMEYLPYGSLRDYL-QKH 125
Query: 415 MKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFN 474
+++ L+ +G+ YL G + IHRD+ NIL++ K+GDFGL K
Sbjct: 126 KERIDHIKLLQYTSQICKGMEYL--GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVL 182
Query: 475 PEGITHLTTRVAGT--LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
P+ + G + + APE K + SDV+SFGVVL EL +
Sbjct: 183 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ ++ +F+ E+EI+ S++H N+V +
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 381 G--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
G YS L+ ++ + L GSL D+L +++ L+ +G+ YL
Sbjct: 85 GVCYSAGRRNLK-----LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 137
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEY 496
G + IHRD+ NIL++ K+GDFGL K P+ + G + + APE
Sbjct: 138 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
K + SDV+SFGVVL EL +
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ ++ +F+ E+EI+ S++H N+V +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 381 G--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
G YS L+ ++ + L GSL D+L +++ L+ +G+ YL
Sbjct: 78 GVCYSAGRRNLK-----LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEY 496
G + IHRD+ NIL++ K+GDFGL K P+ + G + + APE
Sbjct: 131 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
K + SDV+SFGVVL EL +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 25/228 (10%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKA 356
S N+ +F+ +K +GKG +G+V Y + N G VAVK+ ++ ++
Sbjct: 19 SHNMTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE 71
Query: 357 GDANFKHEVEIIASVKHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSG 414
+F+ E+EI+ S++H N+V +G YS L+ ++ + L GSL D+L
Sbjct: 72 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK-----LIMEYLPYGSLRDYL-QKH 125
Query: 415 MKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFN 474
+++ L+ +G+ YL G + IHRD+ NIL++ K+GDFGL K
Sbjct: 126 KERIDHIKLLQYTSQICKGMEYL--GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVL 182
Query: 475 PEGITHLTTRVAGT--LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
P+ + G + + APE K + SDV+SFGVVL EL +
Sbjct: 183 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 323 ENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
E +G G +G V+ T+VAVK K S + +A F E ++ +++H LV L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV 251
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
T P+ I+ + + GSL D L K P + + A G+A++ Q
Sbjct: 252 VTKE-PI-----YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---Q 302
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKL 502
IHRD++A+NIL+ + K+ DFGLA+ + + + APE +G
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 362
Query: 503 TPGSDVYSFGVVLLELLS 520
T SDV+SFG++L+E+++
Sbjct: 363 TIKSDVWSFGILLMEIVT 380
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 12/211 (5%)
Query: 313 IKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVK 372
I + + F +E IG G +G V+ G N +VA+K K S + D +F E E++ +
Sbjct: 24 IDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED-DFIEEAEVMMKLS 80
Query: 373 HVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR 432
H LV L G P+ +V + + +G L D+L + + L + L
Sbjct: 81 HPKLVQLYGVCLEQAPI-----CLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCE 134
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYV 492
G+AYL + +IHRD+ A N L+ E KV DFG+ +F + +T + +
Sbjct: 135 GMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA 191
Query: 493 APEYALYGKLTPGSDVYSFGVVLLELLSGKK 523
+PE + + + SDV+SFGV++ E+ S K
Sbjct: 192 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 222
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 107/204 (52%), Gaps = 18/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ ++ +F+ E+EI+ S++H N+V +
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 381 G--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
G YS L+ ++ + L GSL D+L +++ L+ +G+ YL
Sbjct: 79 GVCYSAGRRNLK-----LIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL- 131
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEY 496
G + IHR++ NIL++ K+GDFGL K P+ + + G + + APE
Sbjct: 132 -GTK-RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
K + SDV+SFGVVL EL +
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 18/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ ++ +F+ E+EI+ S++H N+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 381 G--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
G YS L+ ++ + L GSL ++L +++ L+ +G+ YL
Sbjct: 81 GVCYSAGRRNLK-----LIMEFLPYGSLREYL-QKHKERIDHIKLLQYTSQICKGMEYL- 133
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEY 496
G + IHRD+ NIL++ K+GDFGL K P+ + G + + APE
Sbjct: 134 -GTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
K + SDV+SFGVVL EL +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 27/231 (11%)
Query: 308 FKIEEIKAATMNFSRE---------NIIGKGGYGNVYKG--MLPNGTE--VAVKRFKNC- 353
F E+ A F++E +IG G +G V G LP E VA+K K+
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 354 SKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGS 413
++ +F E I+ H N++ L G T + P+ +I+ + + NGSL D
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV-----MIITEFMENGSL-DSFLRQ 127
Query: 414 GMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF 473
+ + + + G A G+ YL +HRD+ A NIL++ KV DFGL++F
Sbjct: 128 NDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRF 184
Query: 474 NPEGITH--LTTRVAGTLG--YVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ + T+ + G + + APE Y K T SDV+S+G+V+ E++S
Sbjct: 185 LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
Query: 319 NFSRENIIGKGGYGNVYKG--MLPNGTE--VAVKRFK-NCSKAGDANFKHEVEIIASVKH 373
N S + ++G G +G V G LP+ E VA+K K ++ +F E I+ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ L G T + P+ +IV + + NGSL S ++K + +G RG
Sbjct: 106 PNIIRLEGVVTKSKPV-----MIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRG 155
Query: 434 LAY-LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTTRVAGT- 488
+A + Y +HRD+ A NIL++ KV DFGLA+ +PE TTR
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA--YTTRGGKIP 213
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ + +PE Y K T SDV+S+G+VL E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 28/215 (13%)
Query: 323 ENIIGKGGYGNVYKG-MLPNGTEVAVKRFKNCSKAGDA-------NFKHEVEIIASVKHV 374
E IGKGG+G V+KG ++ + + VA+K G+ F+ EV I++++ H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
N+V L G L + +V + + G LY L + W ++LR+ L A G+
Sbjct: 84 NIVKLYG-------LMHNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGI 135
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFE-----AKVGDFGLAKFNPEGITHLTTRVAGTL 489
Y+ P I+HRD+++ NI L E AKV DFGL++ + H + + G
Sbjct: 136 EYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS----VHSVSGLLGNF 190
Query: 490 GYVAPEY--ALYGKLTPGSDVYSFGVVLLELLSGK 522
++APE A T +D YSF ++L +L+G+
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
Query: 319 NFSRENIIGKGGYGNVYKG--MLPNGTE--VAVKRFK-NCSKAGDANFKHEVEIIASVKH 373
N S + ++G G +G V G LP+ E VA+K K ++ +F E I+ H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ L G T + P+ +IV + + NGSL S ++K + +G RG
Sbjct: 77 PNIIRLEGVVTKSKPV-----MIVTEXMENGSL-----DSFLRKHDAQFTVIQLVGMLRG 126
Query: 434 LAY-LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTTRVAGT- 488
+A + Y +HRD+ A NIL++ KV DFGL++ +PE TTR
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA--AYTTRGGKIP 184
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ + +PE Y K T SDV+S+G+VL E++S
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 22/209 (10%)
Query: 323 ENIIGKGGYGNVYKGML--PNGTE--VAVKRFKNC-SKAGDANFKHEVEIIASVKHVNLV 377
E +IG G +G V +G L P E VA+K K ++ F E I+ +H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHL-FGSGMKKLSWPIRLRIALGTARGLAY 436
L G T ++P+ +I+ + + NG+L L G + I+L +G RG+A
Sbjct: 79 RLEGVVTNSMPV-----MILTEFMENGALDSFLRLNDGQFTV---IQL---VGMLRGIAS 127
Query: 437 -LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLG--Y 491
+ Y + + +HRD+ A NIL++ KV DFGL++F E + T+ + G + +
Sbjct: 128 GMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRW 187
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLS 520
APE + K T SD +S+G+V+ E++S
Sbjct: 188 TAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
Query: 319 NFSRENIIGKGGYGNVYKG--MLPNGTE--VAVKRFK-NCSKAGDANFKHEVEIIASVKH 373
N S + ++G G +G V G LP+ E VA+K K ++ +F E I+ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ L G T + P+ +IV + + NGSL S ++K + +G RG
Sbjct: 106 PNIIRLEGVVTKSKPV-----MIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRG 155
Query: 434 LAY-LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTTRVAGT- 488
+A + Y +HRD+ A NIL++ KV DFGL++ +PE TTR
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRGGKIP 213
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ + +PE Y K T SDV+S+G+VL E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
Query: 319 NFSRENIIGKGGYGNVYKG--MLPNGTE--VAVKRFK-NCSKAGDANFKHEVEIIASVKH 373
N S + ++G G +G V G LP+ E VA+K K ++ +F E I+ H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ L G T + P+ +IV + + NGSL S ++K + +G RG
Sbjct: 77 PNIIRLEGVVTKSKPV-----MIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRG 126
Query: 434 LAY-LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTTRVAGT- 488
+A + Y +HRD+ A NIL++ KV DFGL++ +PE TTR
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA--AYTTRGGKIP 184
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ + +PE Y K T SDV+S+G+VL E++S
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Query: 323 ENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
E +G G +G V+ T+VAVK K S + +A F E ++ +++H LV L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAV 245
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
T P+ I+ + + GSL D L K P + + A G+A++ Q
Sbjct: 246 VTKE-PI-----YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---Q 296
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKL 502
IHRD++A+NIL+ + K+ DFGLA+ + + APE +G
Sbjct: 297 RNYIHRDLRAANILVSASLVCKIADFGLARVG----------AKFPIKWTAPEAINFGSF 346
Query: 503 TPGSDVYSFGVVLLELLS 520
T SDV+SFG++L+E+++
Sbjct: 347 TIKSDVWSFGILLMEIVT 364
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
Query: 319 NFSRENIIGKGGYGNVYKG--MLPNGTE--VAVKRFK-NCSKAGDANFKHEVEIIASVKH 373
N S + ++G G +G V G LP+ E VA+K K ++ +F E I+ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ L G T + P+ +IV + + NGSL S ++K + +G RG
Sbjct: 106 PNIIRLEGVVTKSKPV-----MIVTEXMENGSL-----DSFLRKHDAQFTVIQLVGMLRG 155
Query: 434 LAY-LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTTRVAGT- 488
+A + Y +HRD+ A NIL++ KV DFGL++ +PE TTR
Sbjct: 156 IASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRGGKIP 213
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ + +PE Y K T SDV+S+G+VL E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
Query: 319 NFSRENIIGKGGYGNVYKG--MLPNGTE--VAVKRFK-NCSKAGDANFKHEVEIIASVKH 373
N S + ++G G +G V G LP+ E VA+K K ++ +F E I+ H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ L G T + P+ +IV + + NGSL S ++K + +G RG
Sbjct: 94 PNIIRLEGVVTKSKPV-----MIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRG 143
Query: 434 LAY-LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTTRVAGT- 488
+A + Y +HRD+ A NIL++ KV DFGL++ +PE TTR
Sbjct: 144 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA--AYTTRGGKIP 201
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ + +PE Y K T SDV+S+G+VL E++S
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 112/225 (49%), Gaps = 21/225 (9%)
Query: 298 LESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGT-EVAVKRFKNCSKA 356
++ S N ++++E + + ++ +G G YG VY+G+ + VAVK K +
Sbjct: 3 MDPSSPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57
Query: 357 GDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMK 416
+ F E ++ +KH NLV L G T P I+ + + G+L D+L +
Sbjct: 58 VE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQ 111
Query: 417 KLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE 476
++S + L +A + + YL + IHRD+ A N L+ E KV DFGL++
Sbjct: 112 EVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT- 167
Query: 477 GITHLTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
G T+ T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 168 GDTY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
Query: 319 NFSRENIIGKGGYGNVYKG--MLPNGTE--VAVKRFK-NCSKAGDANFKHEVEIIASVKH 373
N S + ++G G +G V G LP+ E VA+K K ++ +F E I+ H
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ L G T + P+ +IV + + NGSL S ++K + +G RG
Sbjct: 104 PNIIRLEGVVTKSKPV-----MIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRG 153
Query: 434 LAY-LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTTRVAGT- 488
+A + Y +HRD+ A NIL++ KV DFGL++ +PE TTR
Sbjct: 154 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRGGKIP 211
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ + +PE Y K T SDV+S+G+VL E++S
Sbjct: 212 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
Query: 319 NFSRENIIGKGGYGNVYKG--MLPNGTE--VAVKRFK-NCSKAGDANFKHEVEIIASVKH 373
N S + ++G G +G V G LP+ E VA+K K ++ +F E I+ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ L G T + P+ +IV + + NGSL S ++K + +G RG
Sbjct: 106 PNIIRLEGVVTKSKPV-----MIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRG 155
Query: 434 LAY-LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTTRVAGT- 488
+A + Y +HRD+ A NIL++ KV DFGL++ +PE TTR
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRGGKIP 213
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ + +PE Y K T SDV+S+G+VL E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
Query: 319 NFSRENIIGKGGYGNVYKG--MLPNGTE--VAVKRFK-NCSKAGDANFKHEVEIIASVKH 373
N S + ++G G +G V G LP+ E VA+K K ++ +F E I+ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ L G T + P+ +IV + + NGSL S ++K + +G RG
Sbjct: 106 PNIIRLEGVVTKSKPV-----MIVTEXMENGSL-----DSFLRKHDAQFTVIQLVGMLRG 155
Query: 434 LAY-LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTTRVAGT- 488
+A + Y +HRD+ A NIL++ KV DFGL++ +PE TTR
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRGGKIP 213
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ + +PE Y K T SDV+S+G+VL E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
Query: 319 NFSRENIIGKGGYGNVYKG--MLPNGTE--VAVKRFK-NCSKAGDANFKHEVEIIASVKH 373
N S + ++G G +G V G LP+ E VA+K K ++ +F E I+ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ L G T + P+ +IV + + NGSL S ++K + +G RG
Sbjct: 106 PNIIRLEGVVTKSKPV-----MIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRG 155
Query: 434 LAY-LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTTRVAGT- 488
+A + Y +HRD+ A NIL++ KV DFGL++ +PE TTR
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRGGKIP 213
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ + +PE Y K T SDV+S+G+VL E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
Query: 319 NFSRENIIGKGGYGNVYKG--MLPNGTE--VAVKRFK-NCSKAGDANFKHEVEIIASVKH 373
N S + ++G G +G V G LP+ E VA+K K ++ +F E I+ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ L G T + P+ +IV + + NGSL S ++K + +G RG
Sbjct: 106 PNIIRLEGVVTKSKPV-----MIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRG 155
Query: 434 LAY-LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTTRVAGT- 488
+A + Y +HRD+ A NIL++ KV DFGL++ +PE TTR
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRGGKIP 213
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ + +PE Y K T SDV+S+G+VL E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 12/211 (5%)
Query: 313 IKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVK 372
I + + F +E IG G +G V+ G N +VA+K + + + + +F E E++ +
Sbjct: 5 IDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLS 61
Query: 373 HVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR 432
H LV L G P+ +V + + +G L D+L + + L + L
Sbjct: 62 HPKLVQLYGVCLEQAPI-----CLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCE 115
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYV 492
G+AYL + +IHRD+ A N L+ E KV DFG+ +F + +T + +
Sbjct: 116 GMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA 172
Query: 493 APEYALYGKLTPGSDVYSFGVVLLELLSGKK 523
+PE + + + SDV+SFGV++ E+ S K
Sbjct: 173 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 203
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
Query: 319 NFSRENIIGKGGYGNVYKG--MLPNGTE--VAVKRFK-NCSKAGDANFKHEVEIIASVKH 373
N S + ++G G +G V G LP+ E VA+K K ++ +F E I+ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ L G T + P+ +IV + + NGSL S ++K + +G RG
Sbjct: 106 PNIIRLEGVVTKSKPV-----MIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRG 155
Query: 434 LAY-LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTTRVAGT- 488
+A + Y +HRD+ A NIL++ KV DFGL++ +PE TTR
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTTRGGKIP 213
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ + +PE Y K T SDV+S+G+VL E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 26/211 (12%)
Query: 323 ENIIGKGGYGNVYKGML--PNGTE--VAVKRFKNC-SKAGDANFKHEVEIIASVKHVNLV 377
E +IG G +G V +G L P E VA+K K ++ F E I+ +H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHL-FGSGMKKLSWPIRLRIALGTARGLAY 436
L G T ++P+ +I+ + + NG+L L G + I+L +G RG+A
Sbjct: 81 RLEGVVTNSMPV-----MILTEFMENGALDSFLRLNDGQFTV---IQL---VGMLRGIAS 129
Query: 437 -LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF------NPEGITHLTTRVAGTL 489
+ Y + + +HRD+ A NIL++ KV DFGL++F +P + L ++ +
Sbjct: 130 GMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIP--I 187
Query: 490 GYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ APE + K T SD +S+G+V+ E++S
Sbjct: 188 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 21/221 (9%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDAN 360
S N ++++E + + ++ +G G YG VY+G+ VAVK K + +
Sbjct: 2 SPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 55
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P I+ + + G+L D+L +++S
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVSA 110
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHRD+ A N L+ E KV DFGL++ G T+
Sbjct: 111 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTY 166
Query: 481 LTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 167 --TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 22/212 (10%)
Query: 319 NFSRENIIGKGGYGNVYKG--MLPNGTE--VAVKRFK-NCSKAGDANFKHEVEIIASVKH 373
N S + ++G G +G V G LP+ E VA+K K ++ +F E I+ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ L G T + P+ +IV + + NGSL S ++K + +G RG
Sbjct: 106 PNIIRLEGVVTKSKPV-----MIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRG 155
Query: 434 LAY-LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTTRVAGT- 488
+A + Y +HRD+ A NIL++ KV DFGL + +PE TTR
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA--YTTRGGKIP 213
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ + +PE Y K T SDV+S+G+VL E++S
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 298 LESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKA 356
++ S N ++++E + + ++ +G G YG VY+G+ VAVK K +
Sbjct: 3 MDPSSPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57
Query: 357 GDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMK 416
+ F E ++ +KH NLV L G T P I+ + + G+L D+L +
Sbjct: 58 VE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQ 111
Query: 417 KLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE 476
+++ + L +A + + YL + IHRD+ A N L+ E KV DFGL++
Sbjct: 112 EVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 168
Query: 477 GITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
+ + APE Y K + SDV++FGV+L E+
Sbjct: 169 DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 21/221 (9%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDAN 360
S N ++++E + + ++ +G G YG VY+G+ VAVK K + +
Sbjct: 2 SPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 55
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P I+ + + G+L D+L +++S
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIIIEFMTYGNLLDYLRECNRQEVSA 110
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHRD+ A N L+ E KV DFGL++ G T+
Sbjct: 111 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTY 166
Query: 481 LTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 167 --TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 21/225 (9%)
Query: 298 LESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKA 356
++ S N ++++E + + ++ +G G YG VY+G+ VAVK K +
Sbjct: 3 MDPSSPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57
Query: 357 GDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMK 416
+ F E ++ +KH NLV L G T P I+ + + G+L D+L +
Sbjct: 58 VE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQ 111
Query: 417 KLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE 476
+++ + L +A + + YL + IHRD+ A N L+ E KV DFGL++
Sbjct: 112 EVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT- 167
Query: 477 GITHLTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
G T+ T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 168 GDTY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 21/221 (9%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDAN 360
S N ++++E + + ++ +G G YG VY+G+ VAVK K + +
Sbjct: 2 SPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 55
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P I+ + + G+L D+L +++S
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVSA 110
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHRD+ A N L+ E KV DFGL++ G T+
Sbjct: 111 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTY 166
Query: 481 LTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 167 --TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 12/211 (5%)
Query: 313 IKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVK 372
I + + F +E IG G +G V+ G N +VA+K + + + + +F E E++ +
Sbjct: 4 IDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLS 60
Query: 373 HVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR 432
H LV L G P+ +V + + +G L D+L + + L + L
Sbjct: 61 HPKLVQLYGVCLEQAPI-----CLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCE 114
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYV 492
G+AYL + ++IHRD+ A N L+ E KV DFG+ +F + +T + +
Sbjct: 115 GMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA 171
Query: 493 APEYALYGKLTPGSDVYSFGVVLLELLSGKK 523
+PE + + + SDV+SFGV++ E+ S K
Sbjct: 172 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 12/211 (5%)
Query: 313 IKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVK 372
I + + F +E IG G +G V+ G N +VA+K + + + + +F E E++ +
Sbjct: 2 IDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLS 58
Query: 373 HVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR 432
H LV L G P+ +V + + +G L D+L + + L + L
Sbjct: 59 HPKLVQLYGVCLEQAPI-----CLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCE 112
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYV 492
G+AYL + +IHRD+ A N L+ E KV DFG+ +F + +T + +
Sbjct: 113 GMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA 169
Query: 493 APEYALYGKLTPGSDVYSFGVVLLELLSGKK 523
+PE + + + SDV+SFGV++ E+ S K
Sbjct: 170 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 200
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 12/211 (5%)
Query: 313 IKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVK 372
I + + F +E IG G +G V+ G N +VA+K + + + + +F E E++ +
Sbjct: 4 IDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLS 60
Query: 373 HVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR 432
H LV L G P+ +V + + +G L D+L + + L + L
Sbjct: 61 HPKLVQLYGVCLEQAPI-----CLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCE 114
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYV 492
G+AYL + +IHRD+ A N L+ E KV DFG+ +F + +T + +
Sbjct: 115 GMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA 171
Query: 493 APEYALYGKLTPGSDVYSFGVVLLELLSGKK 523
+PE + + + SDV+SFGV++ E+ S K
Sbjct: 172 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 21/221 (9%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDAN 360
S N ++++E + + ++ +G G YG VY+G+ VAVK K + +
Sbjct: 2 SPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 55
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P I+ + + G+L D+L +++S
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIIIEFMTYGNLLDYLRECNRQEVSA 110
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHRD+ A N L+ E KV DFGL++ G T+
Sbjct: 111 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTY 166
Query: 481 LTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 167 --TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 21/225 (9%)
Query: 298 LESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKA 356
++ S N ++++E + + ++ +G G YG VY+G+ VAVK K +
Sbjct: 3 MDPSSPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57
Query: 357 GDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMK 416
+ F E ++ +KH NLV L G T P I+ + + G+L D+L +
Sbjct: 58 VE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIIIEFMTYGNLLDYLRECNRQ 111
Query: 417 KLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE 476
+++ + L +A + + YL + IHRD+ A N L+ E KV DFGL++
Sbjct: 112 EVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT- 167
Query: 477 GITHLTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
G T+ T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 168 GDTY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 10/201 (4%)
Query: 319 NFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLV 377
+ + ++ +G G YG VY+G+ VAVK K + + F E ++ +KH NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 70
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L G T P I+ + + G+L D+L +++S + L +A + + YL
Sbjct: 71 QLLGVCTREPPF-----YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYA 497
+ IHRD+ A N L+ E KV DFGL++ + + APE
Sbjct: 126 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL 182
Query: 498 LYGKLTPGSDVYSFGVVLLEL 518
Y K + SDV++FGV+L E+
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEI 203
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 12/211 (5%)
Query: 313 IKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVK 372
I + + F +E IG G +G V+ G N +VA+K + + + + +F E E++ +
Sbjct: 7 IDPSELTFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLS 63
Query: 373 HVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR 432
H LV L G P+ +V + + +G L D+L + + L + L
Sbjct: 64 HPKLVQLYGVCLEQAPI-----CLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCE 117
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYV 492
G+AYL + +IHRD+ A N L+ E KV DFG+ +F + +T + +
Sbjct: 118 GMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA 174
Query: 493 APEYALYGKLTPGSDVYSFGVVLLELLSGKK 523
+PE + + + SDV+SFGV++ E+ S K
Sbjct: 175 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 205
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 28/215 (13%)
Query: 323 ENIIGKGGYGNVYKG-MLPNGTEVAVKRFKNCSKAGDA-------NFKHEVEIIASVKHV 374
E IGKGG+G V+KG ++ + + VA+K G+ F+ EV I++++ H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
N+V L G L + +V + + G LY L + W ++LR+ L A G+
Sbjct: 84 NIVKLYG-------LMHNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGI 135
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFE-----AKVGDFGLAKFNPEGITHLTTRVAGTL 489
Y+ P I+HRD+++ NI L E AKV DFG ++ + H + + G
Sbjct: 136 EYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS----VHSVSGLLGNF 190
Query: 490 GYVAPEY--ALYGKLTPGSDVYSFGVVLLELLSGK 522
++APE A T +D YSF ++L +L+G+
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 21/225 (9%)
Query: 298 LESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKA 356
++ S N ++++E + + ++ +G G YG VY+G+ VAVK K +
Sbjct: 3 MDPSSPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57
Query: 357 GDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMK 416
+ F E ++ +KH NLV L G T P I+ + + G+L D+L +
Sbjct: 58 VE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQ 111
Query: 417 KLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE 476
+++ + L +A + + YL + IHRD+ A N L+ E KV DFGL++
Sbjct: 112 EVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT- 167
Query: 477 GITHLTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
G T+ T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 168 GDTY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 28/215 (13%)
Query: 323 ENIIGKGGYGNVYKG-MLPNGTEVAVKRFKNCSKAGDA-------NFKHEVEIIASVKHV 374
E IGKGG+G V+KG ++ + + VA+K G+ F+ EV I++++ H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
N+V L G L + +V + + G LY L + W ++LR+ L A G+
Sbjct: 84 NIVKLYG-------LMHNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGI 135
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFE-----AKVGDFGLAKFNPEGITHLTTRVAGTL 489
Y+ P I+HRD+++ NI L E AKV DF L++ + H + + G
Sbjct: 136 EYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS----VHSVSGLLGNF 190
Query: 490 GYVAPEY--ALYGKLTPGSDVYSFGVVLLELLSGK 522
++APE A T +D YSF ++L +L+G+
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 21/221 (9%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDAN 360
S N ++++E + + ++ +G G YG VY+G+ VAVK K + +
Sbjct: 3 SPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 56
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P I+ + + G+L D+L ++++
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNA 111
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHRD+ A N L+ E KV DFGL++ G T+
Sbjct: 112 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTY 167
Query: 481 LTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 168 --TAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 110/221 (49%), Gaps = 21/221 (9%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGT-EVAVKRFKNCSKAGDAN 360
S N ++++E + + ++ +G G YG VY+G+ + VAVK K + +
Sbjct: 15 SPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 68
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P I+ + + G+L D+L ++++
Sbjct: 69 FLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNA 123
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHRD+ A N L+ E KV DFGL++ G T+
Sbjct: 124 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTY 179
Query: 481 LTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 180 --TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 218
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 21/221 (9%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDAN 360
S N ++++E + + ++ +G G YG VY+G+ VAVK K + +
Sbjct: 4 SPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 57
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P I+ + + G+L D+L ++++
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNA 112
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHRD+ A N L+ E KV DFGL++ G T+
Sbjct: 113 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTY 168
Query: 481 LTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 169 --TAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 110/221 (49%), Gaps = 21/221 (9%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGT-EVAVKRFKNCSKAGDAN 360
S N ++++E + + ++ +G G YG VY+G+ + VAVK K + +
Sbjct: 2 SPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 55
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P I+ + + G+L D+L ++++
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNA 110
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHRD+ A N L+ E KV DFGL++ G T+
Sbjct: 111 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTY 166
Query: 481 LTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 167 --TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 10/201 (4%)
Query: 319 NFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLV 377
+ + ++ +G G YG VY+G+ VAVK K + + F E ++ +KH NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 70
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L G T P I+ + + G+L D+L +++S + L +A + + YL
Sbjct: 71 QLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYA 497
+ IHRD+ A N L+ E KV DFGL++ + + APE
Sbjct: 126 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESL 182
Query: 498 LYGKLTPGSDVYSFGVVLLEL 518
Y K + SDV++FGV+L E+
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEI 203
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 110/221 (49%), Gaps = 21/221 (9%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGT-EVAVKRFKNCSKAGDAN 360
S N ++++E + + ++ +G G YG VY+G+ + VAVK K + +
Sbjct: 2 SPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 55
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P I+ + + G+L D+L ++++
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNA 110
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHRD+ A N L+ E KV DFGL++ G T+
Sbjct: 111 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTY 166
Query: 481 LTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 167 --TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 15/218 (6%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDAN 360
S N ++++E + + ++ +G G YG VY+G+ VAVK K + +
Sbjct: 3 SPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 56
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P I+ + + G+L D+L ++++
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIIIEFMTYGNLLDYLRECNRQEVNA 111
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHRD+ A N L+ E KV DFGL++
Sbjct: 112 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXT 168
Query: 481 LTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
+ + APE Y K + SDV++FGV+L E+
Sbjct: 169 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 110/221 (49%), Gaps = 21/221 (9%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGT-EVAVKRFKNCSKAGDAN 360
S N ++++E + + ++ +G G YG VY+G+ + VAVK K + +
Sbjct: 6 SPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 59
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P I+ + + G+L D+L ++++
Sbjct: 60 FLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNA 114
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHRD+ A N L+ E KV DFGL++ G T+
Sbjct: 115 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTY 170
Query: 481 LTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 171 --TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 21/221 (9%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDAN 360
S N ++++E + + ++ +G G YG VY+G+ VAVK K + +
Sbjct: 4 SPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 57
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P I+ + + G+L D+L ++++
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNA 112
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHRD+ A N L+ E KV DFGL++ G T+
Sbjct: 113 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTY 168
Query: 481 LTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 169 --TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 26/210 (12%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV--KHVNLVALRGYS 383
+GKG YG V++G+ +G VAVK F S + ++ E EI +V +H N++ S
Sbjct: 16 VGKGRYGEVWRGLW-HGESVAVKIF---SSRDEQSWFRETEIYNTVLLRHDNILGFIA-S 70
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH---YG 440
T Q ++ +GSLYD L + L + LR+A+ A GLA+LH +G
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFL---QRQTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 441 VQ--PAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL----TTRVAGTLGYVAP 494
Q PAI HRD K+ N+L+ + + D GLA + +G +L RV GT Y+AP
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMAP 186
Query: 495 EYALYGKLT------PGSDVYSFGVVLLEL 518
E T +D+++FG+VL E+
Sbjct: 187 EVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 24/220 (10%)
Query: 311 EEIKAATMNFSRENIIGKGGYGNVYKG--MLPNGTE--VAVKRFK-NCSKAGDANFKHEV 365
+EI+A+ + R +IG G +G V G LP E VA+K K ++ +F E
Sbjct: 17 KEIEASCITIER--VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEA 74
Query: 366 EIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLR 425
I+ H N++ L G T + P+ +IV + + NGSL + +KK +
Sbjct: 75 SIMGQFDHPNIIHLEGVVTKSKPV-----MIVTEYMENGSL-----DTFLKKNDGQFTVI 124
Query: 426 IALGTARGL-AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHL 481
+G RG+ A + Y +HRD+ A NIL++ KV DFGL++ +PE
Sbjct: 125 QLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--Y 182
Query: 482 TTRVAGT-LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
TTR + + APE + K T SDV+S+G+V+ E++S
Sbjct: 183 TTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 323 ENIIGKGGYGNVYKG--MLPNGTE--VAVKRFKNC-SKAGDANFKHEVEIIASVKHVNLV 377
E +IG G +G V G LP E VA+K K+ ++ +F E I+ H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L G T + P+ +I+ + + NGSL D + + + + G A G+ YL
Sbjct: 72 HLEGVVTKSTPV-----MIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 125
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLG--YVA 493
+HR + A NIL++ KV DFGL++F + + T+ + G + + A
Sbjct: 126 ---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 494 PEYALYGKLTPGSDVYSFGVVLLELLS 520
PE Y K T SDV+S+G+V+ E++S
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IGKG +G+V G G +VAVK KN + A F E ++ ++H NLV L G
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLG---- 66
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
+ E IV + + GSL D+L G L L+ +L + YL
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 123
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTL--GYVAPEYALYGKLT 503
+HRD+ A N+L+ E AKV DFGL K +T+ G L + APE K +
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFS 177
Query: 504 PGSDVYSFGVVLLELLS 520
SDV+SFG++L E+ S
Sbjct: 178 TKSDVWSFGILLWEIYS 194
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 125/285 (43%), Gaps = 35/285 (12%)
Query: 318 MNFSRENI-----IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVK 372
M RE I +G G +G V G +VAVK K S + D F+ E + + +
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQ-EAQTMMKLS 61
Query: 373 HVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR 432
H LV G + P+ IV + + NG L ++L G K L L +
Sbjct: 62 HPKLVKFYGVCSKEYPI-----YIVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCE 115
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF--NPEGITHLTTRVAGTLG 490
G+A+L IHRD+ A N L+D KV DFG+ ++ + + ++ + T+ +
Sbjct: 116 GMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP--VK 170
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSDWAWELVKEGKTL 549
+ APE Y K + SDV++FG+++ E+ S GK ++ V+L V +G L
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK------VSQGHRL 224
Query: 550 DVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
Q + + C H + + RPT Q++ +E
Sbjct: 225 ------YRPHLASDTIYQIMYS---CWHELPEKRPTFQQLLSSIE 260
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 319 NFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLV 377
+ + ++ +G G YG VY+G+ VAVK K + + F E ++ +KH NLV
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 74
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L G T P I+ + + G+L D+L ++++ + L +A + + YL
Sbjct: 75 QLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT---LGYVAP 494
+ IHRD+ A N L+ E KV DFGL++ G T+ T AG + + AP
Sbjct: 130 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTY--TAHAGAKFPIKWTAP 183
Query: 495 EYALYGKLTPGSDVYSFGVVLLEL 518
E Y K + SDV++FGV+L E+
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IGKG +G+V G G +VAVK KN + A F E ++ ++H NLV L G
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLG---- 253
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
+ E IV + + GSL D+L G L L+ +L + YL
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 310
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTL--GYVAPEYALYGKLT 503
+HRD+ A N+L+ E AKV DFGL K +T+ G L + APE K +
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFS 364
Query: 504 PGSDVYSFGVVLLELLS 520
SDV+SFG++L E+ S
Sbjct: 365 TKSDVWSFGILLWEIYS 381
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 10/201 (4%)
Query: 319 NFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLV 377
+ + ++ +G G +G VY+G+ VAVK K + + F E ++ +KH NLV
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 70
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L G T P I+ + + G+L D+L +++S + L +A + + YL
Sbjct: 71 QLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYA 497
+ IHRD+ A N L+ E KV DFGL++ + + APE
Sbjct: 126 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL 182
Query: 498 LYGKLTPGSDVYSFGVVLLEL 518
Y K + SDV++FGV+L E+
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEI 203
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IGKG +G+V G G +VAVK KN + A F E ++ ++H NLV L G
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLG---- 81
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
+ E IV + + GSL D+L G L L+ +L + YL
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 138
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTL--GYVAPEYALYGKLT 503
+HRD+ A N+L+ E AKV DFGL K +T+ G L + APE K +
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFS 192
Query: 504 PGSDVYSFGVVLLELLS 520
SDV+SFG++L E+ S
Sbjct: 193 TKSDVWSFGILLWEIYS 209
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 323 ENIIGKGGYGNVYKGML--PNGTEVAV--KRFK-NCSKAGDANFKHEVEIIASVKHVNLV 377
E +IG G +G V G L P +VAV K K ++ +F E I+ H N+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY- 436
L G T P+ +IV + + NG+L + ++K + +G RG+A
Sbjct: 108 HLEGVVTRGKPV-----MIVIEFMENGAL-----DAFLRKHDGQFTVIQLVGMLRGIAAG 157
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTTRVAGTLGYVA 493
+ Y +HRD+ A NIL++ KV DFGL++ +PE + + TT + + A
Sbjct: 158 MRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV-YTTTGGKIPVRWTA 216
Query: 494 PEYALYGKLTPGSDVYSFGVVLLELLS 520
PE Y K T SDV+S+G+V+ E++S
Sbjct: 217 PEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 107/214 (50%), Gaps = 34/214 (15%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV--KHVNLVALRGYS 383
+GKG YG V++G G VAVK F S + ++ E E+ +V +H N++ S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIA-S 70
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH---YG 440
T Q ++ GSLYD+L + + +S LRI L A GLA+LH +G
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIFG 127
Query: 441 VQ--PAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT----RVAGTLGYVAP 494
Q PAI HRD+K+ NIL+ + + + D GLA + + L RV GT Y+AP
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAP 186
Query: 495 E----------YALYGKLTPGSDVYSFGVVLLEL 518
E + Y ++ D+++FG+VL E+
Sbjct: 187 EVLDETIQVDCFDSYKRV----DIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 107/214 (50%), Gaps = 34/214 (15%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV--KHVNLVALRGYS 383
+GKG YG V++G G VAVK F S + ++ E E+ +V +H N++ S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIA-S 70
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH---YG 440
T Q ++ GSLYD+L + + +S LRI L A GLA+LH +G
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIFG 127
Query: 441 VQ--PAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT----RVAGTLGYVAP 494
Q PAI HRD+K+ NIL+ + + + D GLA + + L RV GT Y+AP
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAP 186
Query: 495 E----------YALYGKLTPGSDVYSFGVVLLEL 518
E + Y ++ D+++FG+VL E+
Sbjct: 187 EVLDETIQVDCFDSYKRV----DIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 107/214 (50%), Gaps = 34/214 (15%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV--KHVNLVALRGYS 383
+GKG YG V++G G VAVK F S + ++ E E+ +V +H N++ S
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIA-S 99
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH---YG 440
T Q ++ GSLYD+L + + +S LRI L A GLA+LH +G
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLHIEIFG 156
Query: 441 VQ--PAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT----RVAGTLGYVAP 494
Q PAI HRD+K+ NIL+ + + + D GLA + + L RV GT Y+AP
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAP 215
Query: 495 E----------YALYGKLTPGSDVYSFGVVLLEL 518
E + Y ++ D+++FG+VL E+
Sbjct: 216 EVLDETIQVDCFDSYKRV----DIWAFGLVLWEV 245
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+G+G +G V Y N G +VAVK K S A+ K E+EI+ ++ H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
+G T G+ ++ + L +GSL ++L K++ +L+ A+ +G+ YL
Sbjct: 89 KGICTED---GGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLG- 143
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---FNPEGITHLTTRVAGTLGYVAPEY 496
+HRD+ A N+L++ + K+GDFGL K + E T R + Y APE
Sbjct: 144 --SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APEC 200
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
+ K SDV+SFGV L ELL+
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+G+G +G V Y N G +VAVK K S A+ K E+EI+ ++ H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
+G T G+ ++ + L +GSL ++L K++ +L+ A+ +G+ YL
Sbjct: 77 KGICTED---GGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLG- 131
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---FNPEGITHLTTRVAGTLGYVAPEY 496
+HRD+ A N+L++ + K+GDFGL K + E T R + Y APE
Sbjct: 132 --SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APEC 188
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
+ K SDV+SFGV L ELL+
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 311 EEIKAATMNFSRENIIGKGGYGNVYKGML--PNGTE--VAVKRFK-NCSKAGDANFKHEV 365
+EI A+ + E +IG G +G V G L P E VA+K K + +F E
Sbjct: 24 KEIDASCIKI--EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 81
Query: 366 EIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLR 425
I+ H N++ L G T P+ +I+ + + NGSL D + + +
Sbjct: 82 SIMGQFDHPNIIHLEGVVTKCKPV-----MIITEYMENGSL-DAFLRKNDGRFTVIQLVG 135
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLT 482
+ G G+ YL + +HRD+ A NIL++ KV DFG+++ +PE T
Sbjct: 136 MLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA--AYT 190
Query: 483 TRVAGT-LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
TR + + APE Y K T SDV+S+G+V+ E++S
Sbjct: 191 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 311 EEIKAATMNFSRENIIGKGGYGNVYKGML--PNGTE--VAVKRFK-NCSKAGDANFKHEV 365
+EI A+ + E +IG G +G V G L P E VA+K K + +F E
Sbjct: 9 KEIDASCIKI--EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 66
Query: 366 EIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLR 425
I+ H N++ L G T P+ +I+ + + NGSL D + + +
Sbjct: 67 SIMGQFDHPNIIHLEGVVTKCKPV-----MIITEYMENGSL-DAFLRKNDGRFTVIQLVG 120
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLT 482
+ G G+ YL + +HRD+ A NIL++ KV DFG+++ +PE T
Sbjct: 121 MLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE--AAYT 175
Query: 483 TRVAGT-LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
TR + + APE Y K T SDV+S+G+V+ E++S
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 119/265 (44%), Gaps = 47/265 (17%)
Query: 310 IEEIKAATMNFSRENIIGKGGYGNVY----KGMLPNGTE--VAVKRFKNCSKAGDANFKH 363
++ IK + RE +G+G +G V+ + P + VAVK K+ S +F
Sbjct: 7 VQHIKRHNIVLKRE--LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHR 64
Query: 364 EVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMK------- 416
E E++ +++H ++V G V +EG I+V + + +G L L G
Sbjct: 65 EAELLTNLQHEHIVKFYG-----VCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG 119
Query: 417 ----KLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK 472
+L+ L IA A G+ YL +HRD+ N L+ E K+GDFG+++
Sbjct: 120 NPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
Query: 473 -------FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS-GKKA 524
+ G T L R ++ PE +Y K T SDV+S GVVL E+ + GK+
Sbjct: 177 DVYSTDYYRVGGHTMLPIR------WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
Query: 525 CEIIQGKSVLLSDWAWELVKEGKTL 549
+ V+ E + +G+ L
Sbjct: 231 WYQLSNNEVI------ECITQGRVL 249
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 95/186 (51%), Gaps = 18/186 (9%)
Query: 341 NGTEVAVKRFK-NCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRI-IVC 398
G VAVK K +C + +K E++I+ ++ H +++ +G +G + + +V
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED----QGEKSLQLVM 97
Query: 399 DLLHNGSLYDHL--FGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNIL 456
+ + GSL D+L G+ +L L A G+AYLH IHR++ A N+L
Sbjct: 98 EYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLH---SQHYIHRNLAARNVL 149
Query: 457 LDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEYALYGKLTPGSDVYSFGVV 514
LD K+GDFGLAK PEG + R G + + APE K SDV+SFGV
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 515 LLELLS 520
L ELL+
Sbjct: 210 LYELLT 215
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 311 EEIKAATMNFSRENIIGKGGYGNVYKGML--PNGTE--VAVKRFK-NCSKAGDANFKHEV 365
+EI A+ + E +IG G +G V G L P E VA+K K + +F E
Sbjct: 3 KEIDASCIKI--EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 60
Query: 366 EIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLR 425
I+ H N++ L G T P+ +I+ + + NGSL D + + +
Sbjct: 61 SIMGQFDHPNIIHLEGVVTKCKPV-----MIITEYMENGSL-DAFLRKNDGRFTVIQLVG 114
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLT 482
+ G G+ YL + +HRD+ A NIL++ KV DFG+++ +PE T
Sbjct: 115 MLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE--AAYT 169
Query: 483 TRVAGT-LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
TR + + APE Y K T SDV+S+G+V+ E++S
Sbjct: 170 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 95/186 (51%), Gaps = 18/186 (9%)
Query: 341 NGTEVAVKRFK-NCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRI-IVC 398
G VAVK K +C + +K E++I+ ++ H +++ +G +G + + +V
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED----QGEKSLQLVM 97
Query: 399 DLLHNGSLYDHL--FGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNIL 456
+ + GSL D+L G+ +L L A G+AYLH IHR++ A N+L
Sbjct: 98 EYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLH---AQHYIHRNLAARNVL 149
Query: 457 LDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEYALYGKLTPGSDVYSFGVV 514
LD K+GDFGLAK PEG + R G + + APE K SDV+SFGV
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVT 209
Query: 515 LLELLS 520
L ELL+
Sbjct: 210 LYELLT 215
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 110/221 (49%), Gaps = 21/221 (9%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGT-EVAVKRFKNCSKAGDAN 360
S N ++++E + + ++ +G G YG VY+G+ + VAVK K + +
Sbjct: 209 SPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 262
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P I+ + + G+L D+L +++S
Sbjct: 263 FLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVSA 317
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHR++ A N L+ E KV DFGL++ G T+
Sbjct: 318 VVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTY 373
Query: 481 LTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 374 --TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 94/197 (47%), Gaps = 18/197 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IGKG +G+V G G +VAVK KN + A F E ++ ++H NLV L G
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLG---- 72
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
+ E IV + + GSL D+L G L L+ +L + YL
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 129
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTL--GYVAPEYALYGKLT 503
+HRD+ A N+L+ E AKV DFGL K +T+ G L + APE +
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREAAFS 183
Query: 504 PGSDVYSFGVVLLELLS 520
SDV+SFG++L E+ S
Sbjct: 184 TKSDVWSFGILLWEIYS 200
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 326 IGKGGYGNVYKGML-PNGTEVAVKRFKNCSKAG-DANFKHEVEIIASVKHVNLVALRGYS 383
IG+G +G V+ G L + T VAVK + A F E I+ H N+V L G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQP 443
T P+ IV +L+ G L G + L L++ A G+ YL
Sbjct: 182 TQKQPI-----YIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLE---SK 232
Query: 444 AIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT-LGYVAPEYALYGKL 502
IHRD+ A N L+ E K+ DFG+++ +G+ + + + + APE YG+
Sbjct: 233 CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRY 292
Query: 503 TPGSDVYSFGVVLLELLS 520
+ SDV+SFG++L E S
Sbjct: 293 SSESDVWSFGILLWETFS 310
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 103/228 (45%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I A + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 75 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 226
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 41/279 (14%)
Query: 323 ENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
E ++G+G +G V K +VA+K+ + S++ F E+ ++ V H N+V L G
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFG-------SGMKKLSWPIRLRIALGTARGLA 435
V +V + GSLY+ L G + +SW L ++G+A
Sbjct: 70 CLNPV-------CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVA 116
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEA-KVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH A+IHRD+K N+LL K+ DFG A + TH+T G+ ++AP
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHMTNN-KGSAAWMAP 172
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKTLDVIXX 554
E + DV+S+G++L E+++ +K + I G + + WA V G +I
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM-WA---VHNGTRPPLI-- 226
Query: 555 XXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKIL 593
+ ++T P RP+M++IVKI+
Sbjct: 227 -----KNLPKPIESLMTRCWSKDP--SQRPSMEEIVKIM 258
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 41/279 (14%)
Query: 323 ENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
E ++G+G +G V K +VA+K+ + S++ F E+ ++ V H N+V L G
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFG-------SGMKKLSWPIRLRIALGTARGLA 435
V +V + GSLY+ L G + +SW L ++G+A
Sbjct: 71 CLNPV-------CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVA 117
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEA-KVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH A+IHRD+K N+LL K+ DFG A + TH+T G+ ++AP
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHMTNN-KGSAAWMAP 173
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKTLDVIXX 554
E + DV+S+G++L E+++ +K + I G + + WA V G +I
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM-WA---VHNGTRPPLI-- 227
Query: 555 XXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKIL 593
+ ++T P RP+M++IVKI+
Sbjct: 228 -----KNLPKPIESLMTRCWSKDP--SQRPSMEEIVKIM 259
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 74 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 225
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 16/221 (7%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDAN 360
+ NL +++ + + + ++ +G G YG VY G+ VAVK K + +
Sbjct: 16 TENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-E 74
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P IV + + G+L D+L ++++
Sbjct: 75 FLKEAAVMKEIKHPNLVQLLGVCTLEPPF-----YIVTEYMPYGNLLDYLRECNREEVTA 129
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHRD+ A N L+ E KV DFGL++ G T+
Sbjct: 130 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTY 185
Query: 481 LTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
T AG + + APE Y + SDV++FGV+L E+
Sbjct: 186 --TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 326 IGKGGYGNVYKGML-PNGTEVAVKRFKNCSKAG-DANFKHEVEIIASVKHVNLVALRGYS 383
IG+G +G V+ G L + T VAVK + A F E I+ H N+V L G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQP 443
T P+ IV +L+ G L G + L L++ A G+ YL
Sbjct: 182 TQKQPI-----YIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLE---SK 232
Query: 444 AIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT-LGYVAPEYALYGKL 502
IHRD+ A N L+ E K+ DFG+++ +G+ + + + + APE YG+
Sbjct: 233 CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRY 292
Query: 503 TPGSDVYSFGVVLLELLS 520
+ SDV+SFG++L E S
Sbjct: 293 SSESDVWSFGILLWETFS 310
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 74 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 225
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 75 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 226
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 21/221 (9%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGT-EVAVKRFKNCSKAGDAN 360
S N ++++E + + ++ +G G YG VY+G+ + VAVK K + +
Sbjct: 206 SPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 259
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P I+ + + G+L D+L ++++
Sbjct: 260 FLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNA 314
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHR++ A N L+ E KV DFGL++ G T+
Sbjct: 315 VVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTY 370
Query: 481 LTTRVAGT---LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
T AG + + APE Y K + SDV++FGV+L E+
Sbjct: 371 --TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 93/186 (50%), Gaps = 18/186 (9%)
Query: 341 NGTEVAVKRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRI-IVC 398
G VAVK K C + ++ E+EI+ ++ H ++V +G +G + + +V
Sbjct: 37 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCED----QGEKSVQLVM 92
Query: 399 DLLHNGSLYDHL--FGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNIL 456
+ + GSL D+L G+ +L L A G+AYLH IHR + A N+L
Sbjct: 93 EYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLH---AQHYIHRALAARNVL 144
Query: 457 LDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEYALYGKLTPGSDVYSFGVV 514
LD K+GDFGLAK PEG + R G + + APE K SDV+SFGV
Sbjct: 145 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVT 204
Query: 515 LLELLS 520
L ELL+
Sbjct: 205 LYELLT 210
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 15/218 (6%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGT-EVAVKRFKNCSKAGDAN 360
S N ++++E + + ++ +G G YG VY+G+ + VAVK K + +
Sbjct: 248 SPNYDKWEMERT-----DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 301
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F E ++ +KH NLV L G T P I+ + + G+L D+L ++++
Sbjct: 302 FLKEAAVMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNA 356
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+ L +A + + YL + IHR++ A N L+ E KV DFGL++
Sbjct: 357 VVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 413
Query: 481 LTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
+ + APE Y K + SDV++FGV+L E+
Sbjct: 414 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 93/186 (50%), Gaps = 18/186 (9%)
Query: 341 NGTEVAVKRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRI-IVC 398
G VAVK K C + ++ E+EI+ ++ H ++V +G +G + + +V
Sbjct: 36 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCED----QGEKSVQLVM 91
Query: 399 DLLHNGSLYDHL--FGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNIL 456
+ + GSL D+L G+ +L L A G+AYLH IHR + A N+L
Sbjct: 92 EYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLH---AQHYIHRALAARNVL 143
Query: 457 LDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEYALYGKLTPGSDVYSFGVV 514
LD K+GDFGLAK PEG + R G + + APE K SDV+SFGV
Sbjct: 144 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVT 203
Query: 515 LLELLS 520
L ELL+
Sbjct: 204 LYELLT 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 74 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 225
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 125/291 (42%), Gaps = 34/291 (11%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGML----PNGTEVAVKRFK-NCSKAGDANFKHEVE 366
EI+A+ ++ E IIG G G V G L VA+K K ++ +F E
Sbjct: 45 EIEASRIHI--EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 367 IIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI 426
I+ H N++ L G T G +IV + + NGSL D + + + + +
Sbjct: 103 IMGQFDHPNIIRLEGVVT-----RGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGM 156
Query: 427 ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVA 486
G G+ YL +HRD+ A N+L+D KV DFGL++ + T
Sbjct: 157 LRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTG 213
Query: 487 GTLG--YVAPEYALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSDWAWELV 543
G + + APE + + SDV+SFGVV+ E+L+ G++ + + V+ S V
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS------V 267
Query: 544 KEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+EG L Q +L C H RP QIV +L+
Sbjct: 268 EEGYRLPA------PMGCPHALHQLMLD---CWHKDRAQRPRFSQIVSVLD 309
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 74 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 225
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 75 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 226
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 74 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 225
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 128/292 (43%), Gaps = 36/292 (12%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGML----PNGTEVAVKRFK-NCSKAGDANFKHEVE 366
EI+A+ ++ E IIG G G V G L VA+K K ++ +F E
Sbjct: 45 EIEASRIHI--EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 367 IIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI 426
I+ H N++ L G T G +IV + + NGSL D + + + + +
Sbjct: 103 IMGQFDHPNIIRLEGVVT-----RGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGM 156
Query: 427 ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLTT 483
G G+ YL +HRD+ A N+L+D KV DFGL++ +P+ + TT
Sbjct: 157 LRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA-AYTTT 212
Query: 484 RVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSDWAWEL 542
+ + APE + + SDV+SFGVV+ E+L+ G++ + + V+ S
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS------ 266
Query: 543 VKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
V+EG L Q +L C H RP QIV +L+
Sbjct: 267 VEEGYRLPA------PMGCPHALHQLMLD---CWHKDRAQRPRFSQIVSVLD 309
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 73 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 122
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 123 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 224
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 74 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 225
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 107/213 (50%), Gaps = 32/213 (15%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV--KHVNLVALRGYS 383
IGKG YG V+ G G +VAVK F +A++ E EI +V +H N++ G+
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENIL---GFI 97
Query: 384 TATVPLEGH--QRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
A + G Q ++ D NGSLYD+L + + S L++A + GL +LH +
Sbjct: 98 AADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKS---MLKLAYSSVSGLCHLHTEI 154
Query: 442 -----QPAIIHRDIKASNILLDEAFEAKVGDFGLA-KF---NPEGITHLTTRVAGTLGYV 492
+PAI HRD+K+ NIL+ + + D GLA KF E TRV GT Y+
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYM 213
Query: 493 APEYALYGKLTPG-------SDVYSFGVVLLEL 518
PE L L +D+YSFG++L E+
Sbjct: 214 PPE-VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 75 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 226
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 74 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDW-----KEKKT 225
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 74 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 225
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 40/264 (15%)
Query: 279 KKSEERVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGM 338
K S+ R + + P+ ++S+++ K E+ + R +G G +G VY+G
Sbjct: 12 KLSKLRTSTIMTDYNPNYCFAGKTSSISDLK--EVPRKNITLIRG--LGHGAFGEVYEGQ 67
Query: 339 L------PNGTEVAVKRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEG 391
+ P+ +VAVK CS+ + +F E II+ H N+V G S ++P
Sbjct: 68 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP--- 124
Query: 392 HQRIIVCDLLHNGSLYDHLF-----GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAII 446
R I+ +L+ G L L S L+ L +A A G YL + I
Sbjct: 125 --RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFI 179
Query: 447 HRDIKASNILLD---EAFEAKVGDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEY 496
HRDI A N LL AK+GDFG+A+ + G L + ++ PE
Sbjct: 180 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------WMPPEA 233
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
+ G T +D +SFGV+L E+ S
Sbjct: 234 FMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 74 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 225
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 74 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 225
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 40/264 (15%)
Query: 279 KKSEERVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGM 338
K S+ R + + P+ ++S+++ K E+ + R +G G +G VY+G
Sbjct: 36 KLSKLRTSTIMTDYNPNYCFAGKTSSISDLK--EVPRKNITLIRG--LGHGAFGEVYEGQ 91
Query: 339 L------PNGTEVAVKRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEG 391
+ P+ +VAVK CS+ + +F E II+ H N+V G S ++P
Sbjct: 92 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP--- 148
Query: 392 HQRIIVCDLLHNGSLYDHLF-----GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAII 446
R I+ +L+ G L L S L+ L +A A G YL + I
Sbjct: 149 --RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFI 203
Query: 447 HRDIKASNILLD---EAFEAKVGDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEY 496
HRDI A N LL AK+GDFG+A+ + G L + ++ PE
Sbjct: 204 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK------WMPPEA 257
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
+ G T +D +SFGV+L E+ S
Sbjct: 258 FMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 40/264 (15%)
Query: 279 KKSEERVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGM 338
K S+ R + + P+ ++S+++ K E+ + R +G G +G VY+G
Sbjct: 13 KLSKLRTSTIMTDYNPNYCFAGKTSSISDLK--EVPRKNITLIRG--LGHGAFGEVYEGQ 68
Query: 339 L------PNGTEVAVKRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEG 391
+ P+ +VAVK CS+ + +F E II+ H N+V G S ++P
Sbjct: 69 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP--- 125
Query: 392 HQRIIVCDLLHNGSLYDHLF-----GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAII 446
R I+ +L+ G L L S L+ L +A A G YL + I
Sbjct: 126 --RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFI 180
Query: 447 HRDIKASNILL---DEAFEAKVGDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEY 496
HRDI A N LL AK+GDFG+A+ + G L + ++ PE
Sbjct: 181 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK------WMPPEA 234
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
+ G T +D +SFGV+L E+ S
Sbjct: 235 FMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 323 ENIIGKGGYGNVYKGMLPNG---TEVAVKRFKN-CSKAGDANFKHEVEIIASVKH----V 374
+++IG+G +G V K + + A+KR K SK +F E+E++ + H +
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 375 NLVAL---RGYSTATVPLEGHQRIIVCDLLHNGSLYD-----HLFGSGMKKLSWPIRLRI 426
NL+ RGY + H ++ D L + + + S LS L
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLL--DFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 427 ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVA 486
A ARG+ YL Q IHRD+ A NIL+ E + AK+ DFGL++ + R+
Sbjct: 138 AADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 194
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E Y T SDV+S+GV+L E++S
Sbjct: 195 --VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 75 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 226
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 75 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 50/261 (19%)
Query: 299 ESRSSNLARFKIEEIK----AATMNFSRENII-----GKGGYGNVY----KGMLPNGTE- 344
E + S L IE + A + R +I+ G+G +G V+ +LP +
Sbjct: 13 EGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKM 72
Query: 345 -VAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHN 403
VAVK K S++ +F+ E E++ ++H ++V G T PL ++V + + +
Sbjct: 73 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL-----LMVFEYMRH 127
Query: 404 GSLYD---------HLFGSGMKKLSWPIRL----RIALGTARGLAYLHYGVQPAIIHRDI 450
G L L G P+ L +A A G+ YL G+ +HRD+
Sbjct: 128 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL-AGLH--FVHRDL 184
Query: 451 KASNILLDEAFEAKVGDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEYALYGKLT 503
N L+ + K+GDFG+++ + G T L R ++ PE LY K T
Sbjct: 185 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR------WMPPESILYRKFT 238
Query: 504 PGSDVYSFGVVLLELLS-GKK 523
SDV+SFGVVL E+ + GK+
Sbjct: 239 TESDVWSFGVVLWEIFTYGKQ 259
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 75 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 111/241 (46%), Gaps = 46/241 (19%)
Query: 315 AATMNFSRENII-----GKGGYGNVY----KGMLPNGTE--VAVKRFKNCSKAGDANFKH 363
A + R +I+ G+G +G V+ +LP + VAVK K S++ +F+
Sbjct: 10 ACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR 69
Query: 364 EVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYD---------HLFGSG 414
E E++ ++H ++V G T PL ++V + + +G L L G
Sbjct: 70 EAELLTMLQHQHIVRFFGVCTEGRPL-----LMVFEYMRHGDLNRFLRSHGPDAKLLAGG 124
Query: 415 MKKLSWPIRL----RIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGL 470
P+ L +A A G+ YL G+ +HRD+ N L+ + K+GDFG+
Sbjct: 125 EDVAPGPLGLGQLLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGM 181
Query: 471 AK-------FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS-GK 522
++ + G T L R ++ PE LY K T SDV+SFGVVL E+ + GK
Sbjct: 182 SRDIYSTDYYRVGGRTMLPIR------WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 235
Query: 523 K 523
+
Sbjct: 236 Q 236
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 75 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 124
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 226
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 102/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G YG V + E + + +A D N K E+ I + H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 74 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 225
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 40/264 (15%)
Query: 279 KKSEERVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGM 338
K S+ R + + P+ ++S+++ K E+ + R +G G +G VY+G
Sbjct: 2 KLSKLRTSTIMTDYNPNYSFAGKTSSISDLK--EVPRKNITLIRG--LGHGAFGEVYEGQ 57
Query: 339 L------PNGTEVAVKRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEG 391
+ P+ +VAVK CS+ + +F E II+ H N+V G S ++P
Sbjct: 58 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP--- 114
Query: 392 HQRIIVCDLLHNGSLYDHLF-----GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAII 446
R I+ +L+ G L L S L+ L +A A G YL + I
Sbjct: 115 --RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFI 169
Query: 447 HRDIKASNILLD---EAFEAKVGDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEY 496
HRDI A N LL AK+GDFG+A+ + G L + ++ PE
Sbjct: 170 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------WMPPEA 223
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
+ G T +D +SFGV+L E+ S
Sbjct: 224 FMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 40/264 (15%)
Query: 279 KKSEERVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGM 338
K S+ R + + P+ ++S+++ K E+ + R +G G +G VY+G
Sbjct: 22 KLSKLRTSTIMTDYNPNYSFAGKTSSISDLK--EVPRKNITLIRG--LGHGAFGEVYEGQ 77
Query: 339 L------PNGTEVAVKRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEG 391
+ P+ +VAVK CS+ + +F E II+ H N+V G S ++P
Sbjct: 78 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP--- 134
Query: 392 HQRIIVCDLLHNGSLYDHLF-----GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAII 446
R I+ +L+ G L L S L+ L +A A G YL + I
Sbjct: 135 --RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFI 189
Query: 447 HRDIKASNILLD---EAFEAKVGDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEY 496
HRDI A N LL AK+GDFG+A+ + G L + ++ PE
Sbjct: 190 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------WMPPEA 243
Query: 497 ALYGKLTPGSDVYSFGVVLLELLS 520
+ G T +D +SFGV+L E+ S
Sbjct: 244 FMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 323 ENIIGKGGYGNVYKGMLPNG---TEVAVKRFKN-CSKAGDANFKHEVEIIASVKH----V 374
+++IG+G +G V K + + A+KR K SK +F E+E++ + H +
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 375 NLVAL---RGYSTATVPLEGHQRIIVCDLLHNGSLYD-----HLFGSGMKKLSWPIRLRI 426
NL+ RGY + H ++ D L + + + S LS L
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLL--DFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 427 ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVA 486
A ARG+ YL Q IHRD+ A NIL+ E + AK+ DFGL++ + R+
Sbjct: 148 AADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 204
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E Y T SDV+S+GV+L E++S
Sbjct: 205 --VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 111/241 (46%), Gaps = 46/241 (19%)
Query: 315 AATMNFSRENII-----GKGGYGNVY----KGMLPNGTE--VAVKRFKNCSKAGDANFKH 363
A + R +I+ G+G +G V+ +LP + VAVK K S++ +F+
Sbjct: 4 ACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR 63
Query: 364 EVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYD---------HLFGSG 414
E E++ ++H ++V G T PL ++V + + +G L L G
Sbjct: 64 EAELLTMLQHQHIVRFFGVCTEGRPL-----LMVFEYMRHGDLNRFLRSHGPDAKLLAGG 118
Query: 415 MKKLSWPIRL----RIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGL 470
P+ L +A A G+ YL G+ +HRD+ N L+ + K+GDFG+
Sbjct: 119 EDVAPGPLGLGQLLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGM 175
Query: 471 AK-------FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS-GK 522
++ + G T L R ++ PE LY K T SDV+SFGVVL E+ + GK
Sbjct: 176 SRDIYSTDYYRVGGRTMLPIR------WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 229
Query: 523 K 523
+
Sbjct: 230 Q 230
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 40/259 (15%)
Query: 284 RVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGML---- 339
R + + P+ ++S+++ K E+ + R +G G +G VY+G +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLK--EVPRKNITLIRG--LGHGAFGEVYEGQVSGMP 56
Query: 340 --PNGTEVAVKRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRII 396
P+ +VAVK CS+ + +F E II+ + H N+V G S ++P R I
Sbjct: 57 NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLP-----RFI 111
Query: 397 VCDLLHNGSLYDHLF-----GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIK 451
+ +L+ G L L S L+ L +A A G YL + IHRDI
Sbjct: 112 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIA 168
Query: 452 ASNILLD---EAFEAKVGDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
A N LL AK+GDFG+A+ + G L + ++ PE + G
Sbjct: 169 ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------WMPPEAFMEGI 222
Query: 502 LTPGSDVYSFGVVLLELLS 520
T +D +SFGV+L E+ S
Sbjct: 223 FTSKTDTWSFGVLLWEIFS 241
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 324 NIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
+ +G +G V+K L N VAVK F K N ++EV + +KH N++ G
Sbjct: 30 EVKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAE 87
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY---- 439
++ +I GSL D L + +SW IA ARGLAYLH
Sbjct: 88 KRGTSVDVDLWLITA-FHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPG 143
Query: 440 ---GVQPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTTRVAGTLGYVAPE 495
G +PAI HRDIK+ N+LL A + DFGLA KF T GT Y+APE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 496 YALYGKLTPGS------DVYSFGVVLLELLS 520
L G + D+Y+ G+VL EL S
Sbjct: 204 -VLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 107/221 (48%), Gaps = 28/221 (12%)
Query: 324 NIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIAS--VKHVNLVALRG 381
I +G +G V+K L N VAVK F K +++ E EI ++ +KH NL+
Sbjct: 21 EIKARGRFGCVWKAQLMNDF-VAVKIFPLQDKQ---SWQSEREIFSTPGMKHENLLQFIA 76
Query: 382 YSTATVPLEGHQRIIVCDLLHN-GSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYG 440
LE +I H+ GSL D+L G+ ++W +A +RGL+YLH
Sbjct: 77 AEKRGSNLEVELWLITA--FHDKGSLTDYLKGN---IITWNELCHVAETMSRGLSYLHED 131
Query: 441 V--------QPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTTRVAGTLGY 491
V +P+I HRD K+ N+LL A + DFGLA +F P T GT Y
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 492 VAPEYALYGKLTPGS------DVYSFGVVLLELLSGKKACE 526
+APE L G + D+Y+ G+VL EL+S KA +
Sbjct: 192 MAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 40/249 (16%)
Query: 294 PSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGML------PNGTEVAV 347
P+ ++S+++ K E+ + R +G G +G VY+G + P+ +VAV
Sbjct: 25 PNYCFAGKTSSISDLK--EVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAV 80
Query: 348 KRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL 406
K CS+ + +F E II+ + H N+V G S ++P R I+ +L+ G L
Sbjct: 81 KTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLP-----RFILLELMAGGDL 135
Query: 407 YDHLF-----GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILL---D 458
L S L+ L +A A G YL + IHRDI A N LL
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPG 192
Query: 459 EAFEAKVGDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSF 511
AK+GDFG+A+ + G L + ++ PE + G T +D +SF
Sbjct: 193 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------WMPPEAFMEGIFTSKTDTWSF 246
Query: 512 GVVLLELLS 520
GV+L E+ S
Sbjct: 247 GVLLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 114/259 (44%), Gaps = 40/259 (15%)
Query: 284 RVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGML---- 339
R + + P+ ++S+++ K E+ + R +G G +G VY+G +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLK--EVPRKNITLIRG--LGHGAFGEVYEGQVSGMP 56
Query: 340 --PNGTEVAVKRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRII 396
P+ +VAVK CS+ + +F E II+ H N+V G S ++P R I
Sbjct: 57 NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-----RFI 111
Query: 397 VCDLLHNGSLYDHLF-----GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIK 451
+ +L+ G L L S L+ L +A A G YL + IHRDI
Sbjct: 112 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIA 168
Query: 452 ASNILLD---EAFEAKVGDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
A N LL AK+GDFG+A+ + G L + ++ PE + G
Sbjct: 169 ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------WMPPEAFMEGI 222
Query: 502 LTPGSDVYSFGVVLLELLS 520
T +D +SFGV+L E+ S
Sbjct: 223 FTSKTDTWSFGVLLWEIFS 241
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 104/237 (43%), Gaps = 45/237 (18%)
Query: 320 FSRENI-----IGKGGYGNVYK----GMLPNG--TEVAVKRFKNCSKAG-DANFKHEVEI 367
+ R NI IG+G +G V++ G+LP T VAVK K + A A+F+ E +
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103
Query: 368 IASVKHVNLVALRGYSTATVP----------------LEGHQRIIVCDLLHNG-SLYDHL 410
+A + N+V L G P L VC L H+ S +
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 411 FGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGL 470
G LS +L IA A G+AYL + +HRD+ N L+ E K+ DFGL
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGL 220
Query: 471 AK-------FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
++ + +G + R ++ PE Y + T SDV+++GVVL E+ S
Sbjct: 221 SRNIYSADYYKADGNDAIPIR------WMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 114/259 (44%), Gaps = 40/259 (15%)
Query: 284 RVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGML---- 339
R + + P+ ++S+++ K E+ + R +G G +G VY+G +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLK--EVPRKNITLIRG--LGHGAFGEVYEGQVSGMP 56
Query: 340 --PNGTEVAVKRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRII 396
P+ +VAVK CS+ + +F E II+ H N+V G S ++P R I
Sbjct: 57 NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-----RFI 111
Query: 397 VCDLLHNGSLYDHLF-----GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIK 451
+ +L+ G L L S L+ L +A A G YL + IHRDI
Sbjct: 112 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIA 168
Query: 452 ASNILLD---EAFEAKVGDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
A N LL AK+GDFG+A+ + G L + ++ PE + G
Sbjct: 169 ARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK------WMPPEAFMEGI 222
Query: 502 LTPGSDVYSFGVVLLELLS 520
T +D +SFGV+L E+ S
Sbjct: 223 FTSKTDTWSFGVLLWEIFS 241
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 318 MNFSRENIIGKGGYGNVYKGMLP-NGTEVAVKRFK-NCSKAGDANFKHEVEIIASVKHVN 375
M+F +IG GG+G V+K +G +KR K N KA + EV+ +A + HVN
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA-----EREVKALAKLDHVN 65
Query: 376 LVALRG------YSTATVPLEGHQRIIVC-----DLLHNGSLYDHLFGSGMKKLSWPIRL 424
+V G Y T + C + G+L + +KL + L
Sbjct: 66 IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLAL 125
Query: 425 RIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT- 483
+ +G+ Y+H +I+RD+K SNI L + + K+GDFGL +T L
Sbjct: 126 ELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGL-------VTSLKND 175
Query: 484 ----RVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELL 519
R GTL Y++PE D+Y+ G++L ELL
Sbjct: 176 GKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 111/249 (44%), Gaps = 40/249 (16%)
Query: 294 PSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGML------PNGTEVAV 347
P+ ++S+++ K E+ + R +G G +G VY+G + P+ +VAV
Sbjct: 10 PNYCFAGKTSSISDLK--EVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAV 65
Query: 348 KRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL 406
K CS+ + +F E II+ H N+V G S ++P R I+ +L+ G L
Sbjct: 66 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-----RFILMELMAGGDL 120
Query: 407 YDHLF-----GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLD--- 458
L S L+ L +A A G YL + IHRDI A N LL
Sbjct: 121 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPG 177
Query: 459 EAFEAKVGDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSF 511
AK+GDFG+A+ + G L + ++ PE + G T +D +SF
Sbjct: 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------WMPPEAFMEGIFTSKTDTWSF 231
Query: 512 GVVLLELLS 520
GV+L E+ S
Sbjct: 232 GVLLWEIFS 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 111/249 (44%), Gaps = 40/249 (16%)
Query: 294 PSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGML------PNGTEVAV 347
P+ ++S+++ K E+ + R +G G +G VY+G + P+ +VAV
Sbjct: 25 PNYCFAGKTSSISDLK--EVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAV 80
Query: 348 KRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL 406
K CS+ + +F E II+ H N+V G S ++P R I+ +L+ G L
Sbjct: 81 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-----RFILMELMAGGDL 135
Query: 407 YDHLF-----GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILL---D 458
L S L+ L +A A G YL + IHRDI A N LL
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPG 192
Query: 459 EAFEAKVGDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSF 511
AK+GDFG+A+ + G L + ++ PE + G T +D +SF
Sbjct: 193 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------WMPPEAFMEGIFTSKTDTWSF 246
Query: 512 GVVLLELLS 520
GV+L E+ S
Sbjct: 247 GVLLWEIFS 255
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 34/281 (12%)
Query: 286 VKVTDNDEPSLVLESRSSNLARF-KIEEIKAATMNFSRENII------GKGGYGNVYKG- 337
++T D+P + S + F EE+K + R+N++ G G +G+V +G
Sbjct: 297 ARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGV 356
Query: 338 --MLPNGTEVAVKRFKNCSKAGDAN-FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQR 394
M +VA+K K ++ D E +I+ + + +V L G A
Sbjct: 357 YRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA------L 410
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIR--LRIALGTARGLAYLHYGVQPAIIHRDIKA 452
++V ++ G L+ L G K+ P+ + + G+ YL + +HR++ A
Sbjct: 411 MLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAA 464
Query: 453 SNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEYALYGKLTPGSDVYS 510
N+LL AK+ DFGL+K ++ T R AG L + APE + K + SDV+S
Sbjct: 465 RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWS 524
Query: 511 FGVVLLELLS-GKKACEIIQGKSVLLSDWAWELVKEGKTLD 550
+GV + E LS G+K + ++G V+ +++GK ++
Sbjct: 525 YGVTMWEALSYGQKPYKKMKGPEVM------AFIEQGKRME 559
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 111/249 (44%), Gaps = 40/249 (16%)
Query: 294 PSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGML------PNGTEVAV 347
P+ ++S+++ K E+ + R +G G +G VY+G + P+ +VAV
Sbjct: 10 PNYCFAGKTSSISDLK--EVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAV 65
Query: 348 KRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL 406
K CS+ + +F E II+ H N+V G S ++P R I+ +L+ G L
Sbjct: 66 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-----RFILLELMAGGDL 120
Query: 407 YDHLF-----GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLD--- 458
L S L+ L +A A G YL + IHRDI A N LL
Sbjct: 121 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPG 177
Query: 459 EAFEAKVGDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSF 511
AK+GDFG+A+ + G L + ++ PE + G T +D +SF
Sbjct: 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------WMPPEAFMEGIFTSKTDTWSF 231
Query: 512 GVVLLELLS 520
GV+L E+ S
Sbjct: 232 GVLLWEIFS 240
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 91/187 (48%), Gaps = 20/187 (10%)
Query: 341 NGTEVAVKRFK-NCSKAGDANFKHEVEIIASVKHVNLVALRG--YSTATVPLEGHQRIIV 397
G VAVK K + + +K E++I+ ++ H +++ +G L+ +V
Sbjct: 59 TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ-----LV 113
Query: 398 CDLLHNGSLYDHL--FGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+ + GSL D+L G+ +L L A G+AYLH IHRD+ A N+
Sbjct: 114 MEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLH---AQHYIHRDLAARNV 165
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEYALYGKLTPGSDVYSFGV 513
LLD K+GDFGLAK PEG R G + + APE K SDV+SFGV
Sbjct: 166 LLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGV 225
Query: 514 VLLELLS 520
L ELL+
Sbjct: 226 TLYELLT 232
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 111/249 (44%), Gaps = 40/249 (16%)
Query: 294 PSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGML------PNGTEVAV 347
P+ ++S+++ K E+ + R +G G +G VY+G + P+ +VAV
Sbjct: 2 PNYCFAGKTSSISDLK--EVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAV 57
Query: 348 KRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL 406
K CS+ + +F E II+ H N+V G S ++P R I+ +L+ G L
Sbjct: 58 KTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-----RFILLELMAGGDL 112
Query: 407 YDHLF-----GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILL---D 458
L S L+ L +A A G YL + IHRDI A N LL
Sbjct: 113 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPG 169
Query: 459 EAFEAKVGDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSF 511
AK+GDFG+A+ + G L + ++ PE + G T +D +SF
Sbjct: 170 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------WMPPEAFMEGIFTSKTDTWSF 223
Query: 512 GVVLLELLS 520
GV+L E+ S
Sbjct: 224 GVLLWEIFS 232
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 323 ENIIGKGGYGNVYKGMLPNG---TEVAVKRFKN-CSKAGDANFKHEVEIIASVKH----V 374
+++IG+G +G V K + + A+KR K SK +F E+E++ + H +
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 375 NLVAL---RGYSTATVPLEGHQRIIVCDLLHNGSLYD-----HLFGSGMKKLSWPIRLRI 426
NL+ RGY + H ++ D L + + + S LS L
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLL--DFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 427 ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVA 486
A ARG+ YL Q IHR++ A NIL+ E + AK+ DFGL++ + R+
Sbjct: 145 AADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 201
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E Y T SDV+S+GV+L E++S
Sbjct: 202 --VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 38/229 (16%)
Query: 318 MNFSRENIIGKGGYGNVYKGMLP-NGTEVAVKRFK-NCSKAGDANFKHEVEIIASVKHVN 375
M+F +IG GG+G V+K +G ++R K N KA + EV+ +A + HVN
Sbjct: 12 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA-----EREVKALAKLDHVN 66
Query: 376 LVALRGY--------STATVPLEGHQR----------------IIVCDLLHNGSLYDHLF 411
+V G T+ LE I + G+L +
Sbjct: 67 IVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 412 GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGL- 470
+KL + L + +G+ Y+H +IHRD+K SNI L + + K+GDFGL
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 471 AKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELL 519
+G TR GTL Y++PE D+Y+ G++L ELL
Sbjct: 184 TSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 16/227 (7%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKG----MLPNGTEVAVKRFKNCSKAG 357
S+ LA K I + + +IGKG +G VY G N + A+K ++
Sbjct: 5 SALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQ 64
Query: 358 DAN-FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMK 416
F E ++ + H N++AL G +P EG +++ + H L S +
Sbjct: 65 QVEAFLREGLLMRGLNHPNVLALIG---IMLPPEGLPHVLLPYMCHGDLL--QFIRSPQR 119
Query: 417 KLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FN 474
+ + L ARG+ YL + +HRD+ A N +LDE+F KV DFGLA+ +
Sbjct: 120 NPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILD 176
Query: 475 PEGITHLTTRVAG-TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
E + R A + + A E + T SDV+SFGV+L ELL+
Sbjct: 177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 118/269 (43%), Gaps = 50/269 (18%)
Query: 310 IEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGTE------VAVKRFKNCSKAGDANFKH 363
++ IK + RE +G+G +G V+ N + VAVK K+ + A +F+
Sbjct: 9 VQHIKRRDIVLKRE--LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQR 66
Query: 364 EVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSG--------- 414
E E++ +++H ++V G PL I+V + + +G L L G
Sbjct: 67 EAELLTNLQHEHIVKFYGVCGDGDPL-----IMVFEYMKHGDLNKFLRAHGPDAMILVDG 121
Query: 415 -----MKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFG 469
+L L IA A G+ YL +HRD+ N L+ K+GDFG
Sbjct: 122 QPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFG 178
Query: 470 LAK-------FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS-G 521
+++ + G T L R ++ PE +Y K T SDV+SFGV+L E+ + G
Sbjct: 179 MSRDVYSTDYYRVGGHTMLPIR------WMPPESIMYRKFTTESDVWSFGVILWEIFTYG 232
Query: 522 KKACEIIQGKSVLLSDWAWELVKEGKTLD 550
K+ + V+ E + +G+ L+
Sbjct: 233 KQPWFQLSNTEVI------ECITQGRVLE 255
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 101/228 (44%), Gaps = 21/228 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGYS 383
+G+G G V + E + + +A D N K E+ I + H N+V G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
EG+ + + + G L+D + GM + P R G+ YLH G+
Sbjct: 74 R-----EGNIQYLFLEYCSGGELFDRIEPDIGMPE---PDAQRFFHQLMAGVVYLH-GI- 123
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I HRDIK N+LLDE K+ DFGLA F L ++ GTL YVAPE +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 502 L-TPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKT 548
DV+S G+VL +L+G+ + SDW KE KT
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-----KEKKT 225
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 141
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPEGIT-HLTTRVAG 487
A+G+ YL +HRD+ A N +LDE F KV DFGLA+ ++ E + H T
Sbjct: 142 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKL 198
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV 371
EI + F +E +G G +G V G +VA+K K S + D F E +++ ++
Sbjct: 4 EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNL 60
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTA 431
H LV L G T P+ I+ + + NG L ++L + L +
Sbjct: 61 SHEKLVQLYGVCTKQRPI-----FIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVC 114
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
+ YL +HRD+ A N L+++ KV DFGL+++ + + + +
Sbjct: 115 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 171
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLS 520
PE +Y K + SD+++FGV++ E+ S
Sbjct: 172 SPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV 371
EI + F +E +G G +G V G +VA+K K S + D F E +++ ++
Sbjct: 5 EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNL 61
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTA 431
H LV L G T P+ I+ + + NG L ++L + L +
Sbjct: 62 SHEKLVQLYGVCTKQRPI-----FIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVC 115
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
+ YL +HRD+ A N L+++ KV DFGL+++ + + + +
Sbjct: 116 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 172
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLS 520
PE +Y K + SD+++FGV++ E+ S
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 30/210 (14%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ +F+ E++I+ ++ +V R
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 381 GYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY--- 436
G S G Q + +V + L +G L D L R R L +R L Y
Sbjct: 78 GVSYGP----GRQSLRLVMEYLPSGCLRDFL-----------QRHRARLDASRLLLYSSQ 122
Query: 437 ----LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LG 490
+ Y +HRD+ A NIL++ K+ DFGLAK P + R G +
Sbjct: 123 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 182
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ APE + SDV+SFGVVL EL +
Sbjct: 183 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 326 IGKGGYGNVYKGMLP-NGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHVNLVALRG 381
IG G YG V G +VA+K+ N N K E++I+ KH N++A++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV-TNAKRTLRELKILKHFKHDNIIAIKD 121
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL-GTARGLAYLHYG 440
TVP + + V L L+ + S L +R L RGL Y+H
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE---HVRYFLYQLLRGLKYMHSA 178
Query: 441 VQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---FNPEGITHLTTRVAGTLGYVAPEYA 497
+IHRD+K SN+L++E E K+GDFG+A+ +P + T T Y APE
Sbjct: 179 ---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 235
Query: 498 L-YGKLTPGSDVYSFGVVLLELLSGKK 523
L + T D++S G + E+L+ ++
Sbjct: 236 LSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 326 IGKGGYGNVYKGMLP-NGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHVNLVALRG 381
IG G YG V G +VA+K+ N N K E++I+ KH N++A++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV-TNAKRTLRELKILKHFKHDNIIAIKD 120
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL-GTARGLAYLHYG 440
TVP + + V L L+ + S L +R L RGL Y+H
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE---HVRYFLYQLLRGLKYMHSA 177
Query: 441 VQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---FNPEGITHLTTRVAGTLGYVAPEYA 497
+IHRD+K SN+L++E E K+GDFG+A+ +P + T T Y APE
Sbjct: 178 ---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
Query: 498 L-YGKLTPGSDVYSFGVVLLELLSGKK 523
L + T D++S G + E+L+ ++
Sbjct: 235 LSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 33/217 (15%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVK---RFKNCSKAGDAN--FKHEVEIIASVK 372
R ++G G +G VYKG+ +P G V + + N + AN F E I+AS+
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
H +LV L G + T+ L V L+ +G L +++ GS + L+W +++
Sbjct: 76 HPHLVRLLGVCLSPTIQL-------VTQLMPHGCLLEYVHEHKDNIGSQLL-LNWCVQI- 126
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRV 485
A+G+ YL + ++HRD+ A N+L+ K+ DFGLA+ EG
Sbjct: 127 -----AKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLL-EGDEKEYNAD 177
Query: 486 AGTL--GYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
G + ++A E Y K T SDV+S+GV + EL++
Sbjct: 178 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 30/210 (14%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ +F+ E++I+ ++ +V R
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 381 GYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY--- 436
G S G Q + +V + L +G L D L R R L +R L Y
Sbjct: 91 GVSYGP----GRQSLRLVMEYLPSGCLRDFL-----------QRHRARLDASRLLLYSSQ 135
Query: 437 ----LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LG 490
+ Y +HRD+ A NIL++ K+ DFGLAK P + R G +
Sbjct: 136 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 195
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ APE + SDV+SFGVVL EL +
Sbjct: 196 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV 371
EI + F +E +G G +G V G +VA+K K S + D F E +++ ++
Sbjct: 20 EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNL 76
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTA 431
H LV L G T P+ I+ + + NG L ++L + L +
Sbjct: 77 SHEKLVQLYGVCTKQRPI-----FIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVC 130
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF--NPEGITHLTTRVAGTL 489
+ YL +HRD+ A N L+++ KV DFGL+++ + E + + ++ +
Sbjct: 131 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFP--V 185
Query: 490 GYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ PE +Y K + SD+++FGV++ E+ S
Sbjct: 186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 142
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPEGIT-HLTTRVAG 487
A+G+ YL +HRD+ A N +LDE F KV DFGLA+ ++ E + H T
Sbjct: 143 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV 371
EI + F +E +G G +G V G +VA+K K S + D F E +++ ++
Sbjct: 5 EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNL 61
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTA 431
H LV L G T P+ I+ + + NG L ++L + L +
Sbjct: 62 SHEKLVQLYGVCTKQRPI-----FIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVC 115
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
+ YL +HRD+ A N L+++ KV DFGL+++ + + + +
Sbjct: 116 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRW 172
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLS 520
PE +Y K + SD+++FGV++ E+ S
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 30/210 (14%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ +F+ E++I+ ++ +V R
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 381 GYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY--- 436
G S G Q + +V + L +G L D L R R L +R L Y
Sbjct: 79 GVSYGP----GRQSLRLVMEYLPSGCLRDFL-----------QRHRARLDASRLLLYSSQ 123
Query: 437 ----LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LG 490
+ Y +HRD+ A NIL++ K+ DFGLAK P + R G +
Sbjct: 124 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 183
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ APE + SDV+SFGVVL EL +
Sbjct: 184 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 142
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPEGIT-HLTTRVAG 487
A+G+ YL +HRD+ A N +LDE F KV DFGLA+ ++ E + H T
Sbjct: 143 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 161
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPEGIT-HLTTRVAG 487
A+G+ YL +HRD+ A N +LDE F KV DFGLA+ ++ E + H T
Sbjct: 162 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 218
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 219 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 134
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPEGIT-HLTTRVAG 487
A+G+ YL +HRD+ A N +LDE F KV DFGLA+ ++ E + H T
Sbjct: 135 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 191
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 192 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 141
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPEGIT-HLTTRVAG 487
A+G+ YL +HRD+ A N +LDE F KV DFGLA+ ++ E + H T
Sbjct: 142 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 198
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 12/209 (5%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV 371
EI + F +E +G G +G V G +VA+K K S + D F E +++ ++
Sbjct: 11 EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNL 67
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTA 431
H LV L G T P+ I+ + + NG L ++L + L +
Sbjct: 68 SHEKLVQLYGVCTKQRPI-----FIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVC 121
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
+ YL +HRD+ A N L+++ KV DFGL+++ + + + +
Sbjct: 122 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 178
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLS 520
PE +Y K + SD+++FGV++ E+ S
Sbjct: 179 SPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 139
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPEGIT-HLTTRVAG 487
A+G+ YL +HRD+ A N +LDE F KV DFGLA+ ++ E + H T
Sbjct: 140 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 196
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 197 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 137
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPEGIT-HLTTRVAG 487
A+G+ YL +HRD+ A N +LDE F KV DFGLA+ ++ E + H T
Sbjct: 138 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 194
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 195 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 33/217 (15%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVK---RFKNCSKAGDAN--FKHEVEIIASVK 372
R ++G G +G VYKG+ +P G V + + N + AN F E I+AS+
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
H +LV L G + T+ L V L+ +G L +++ GS + L+W +++
Sbjct: 99 HPHLVRLLGVCLSPTIQL-------VTQLMPHGCLLEYVHEHKDNIGSQLL-LNWCVQI- 149
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRV 485
A+G+ YL + ++HRD+ A N+L+ K+ DFGLA+ EG
Sbjct: 150 -----AKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLL-EGDEKEYNAD 200
Query: 486 AGTL--GYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
G + ++A E Y K T SDV+S+GV + EL++
Sbjct: 201 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 52/263 (19%)
Query: 309 KIEEIKAATMNFSRENIIGKGGYGNVYKGML--PNGTE----VAVKRFKNCSKAG-DANF 361
K++EI + + F E +G+ +G VYKG L P E VA+K K+ ++ F
Sbjct: 19 KLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 76
Query: 362 KHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLF--------GS 413
+HE + A ++H N+V L G T PL ++ +G L++ L GS
Sbjct: 77 RHEAMLRARLQHPNVVCLLGVVTKDQPLS-----MIFSYCSHGDLHEFLVMRSPHSDVGS 131
Query: 414 G------MKKLSWPIRLRIALGTARGLAYL--HYGVQPAIIHRDIKASNILLDEAFEAKV 465
L P + + A G+ YL H+ ++H+D+ N+L+ + K+
Sbjct: 132 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKI 186
Query: 466 GDFGLAKFNPEGITHLTTRVAGT----LGYVAPEYALYGKLTPGSDVYSFGVVLLELL-- 519
D GL + E ++ G + ++APE +YGK + SD++S+GVVL E+
Sbjct: 187 SDLGLFR---EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY 243
Query: 520 --------SGKKACEIIQGKSVL 534
S + E+I+ + VL
Sbjct: 244 GLQPYCGYSNQDVVEMIRNRQVL 266
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 140
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPEGIT-HLTTRVAG 487
A+G+ YL +HRD+ A N +LDE F KV DFGLA+ ++ E + H T
Sbjct: 141 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 197
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV 371
EI + F +E +G G +G V G +VA+K K S + D F E +++ ++
Sbjct: 20 EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNL 76
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTA 431
H LV L G T P+ I+ + + NG L ++L + L +
Sbjct: 77 SHEKLVQLYGVCTKQRPI-----FIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVC 130
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF--NPEGITHLTTRVAGTL 489
+ YL +HRD+ A N L+++ KV DFGL+++ + E + + ++ +
Sbjct: 131 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--V 185
Query: 490 GYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ PE +Y K + SD+++FGV++ E+ S
Sbjct: 186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 160
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPEGIT-HLTTRVAG 487
A+G+ YL +HRD+ A N +LDE F KV DFGLA+ ++ E + H T
Sbjct: 161 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 217
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 218 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 23/259 (8%)
Query: 285 VVKVTDNDE-PSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKG--MLPN 341
V V++ D+ ++ E + + + EI+ + R IG+G +G+V++G M P
Sbjct: 358 TVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGR--CIGEGQFGDVHQGIYMSPE 415
Query: 342 --GTEVAVKRFKNC-SKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVC 398
VA+K KNC S + F E + H ++V L G T P+ I+
Sbjct: 416 NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-PV-----WIIM 469
Query: 399 DLLHNGSLYDHLFGSGMKKLSWPIRLRI--ALGTARGLAYLHYGVQPAIIHRDIKASNIL 456
+L G L L ++K S + I A + LAYL +HRDI A N+L
Sbjct: 470 ELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 523
Query: 457 LDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLL 516
+ K+GDFGL+++ + + ++ + ++APE + + T SDV+ FGV +
Sbjct: 524 VSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 583
Query: 517 E-LLSGKKACEIIQGKSVL 534
E L+ G K + ++ V+
Sbjct: 584 EILMHGVKPFQGVKNNDVI 602
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 320 FSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVA 378
++R IG+G G VY M + G EVA+++ + +E+ ++ K+ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 379 -LRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L Y L G + +V + L GSL D + + M + R L + L +L
Sbjct: 82 YLDSY------LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFL 132
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEY 496
H +IHRDIK+ NILL K+ DFG A+ PE T + GT ++APE
Sbjct: 133 HSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEV 187
Query: 497 ALYGKLTPGSDVYSFGVVLLELLSGK 522
P D++S G++ +E++ G+
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 27/239 (11%)
Query: 309 KIEEIKAATMNFSRENIIGKGGYGNVYKG-MLPNGTEVAVKRF--KNCSKAGDAN-FKHE 364
KIE+ K N++GKG + VY+ + G EVA+K K KAG ++E
Sbjct: 9 KIEDFKVG-------NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 365 VEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRL 424
V+I +KH +++ L Y + + +V ++ HNG + +L + +K S
Sbjct: 62 VKIHCQLKHPSILELYNYFE-----DSNYVYLVLEMCHNGEMNRYL-KNRVKPFSENEAR 115
Query: 425 RIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTT 483
G+ YLH I+HRD+ SN+LL K+ DFGLA + H T
Sbjct: 116 HFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT- 171
Query: 484 RVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKS----VLLSDW 538
+ GT Y++PE A SDV+S G + LL G+ + K+ V+L+D+
Sbjct: 172 -LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY 229
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 23/259 (8%)
Query: 285 VVKVTDNDE-PSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKG--MLPN 341
V V++ D+ ++ E + + + EI+ + R IG+G +G+V++G M P
Sbjct: 358 TVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGR--CIGEGQFGDVHQGIYMSPE 415
Query: 342 --GTEVAVKRFKNC-SKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVC 398
VA+K KNC S + F E + H ++V L G T P+ I+
Sbjct: 416 NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN-PV-----WIIM 469
Query: 399 DLLHNGSLYDHLFGSGMKKLSWPIRLRI--ALGTARGLAYLHYGVQPAIIHRDIKASNIL 456
+L G L L ++K S + I A + LAYL +HRDI A N+L
Sbjct: 470 ELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 523
Query: 457 LDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLL 516
+ K+GDFGL+++ + + ++ + ++APE + + T SDV+ FGV +
Sbjct: 524 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 583
Query: 517 E-LLSGKKACEIIQGKSVL 534
E L+ G K + ++ V+
Sbjct: 584 EILMHGVKPFQGVKNNDVI 602
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 27/234 (11%)
Query: 326 IGKGGYGNVYKG---MLPNGTEVAVKRFKNCSKAGDAN-FKHEVEIIASVKHVNLVALRG 381
+G G +G+V +G M +VA+K K ++ D E +I+ + + +V L G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIR--LRIALGTARGLAYLHY 439
A + +V ++ G L+ L G K+ P+ + + G+ YL
Sbjct: 78 VCQAEALM------LVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLE- 127
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGYVAPEYA 497
+ +HRD+ A N+LL AK+ DFGL+K ++ T R AG L + APE
Sbjct: 128 --EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 185
Query: 498 LYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSDWAWELVKEGKTLD 550
+ K + SDV+S+GV + E LS G+K + ++G V+ +++GK ++
Sbjct: 186 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM------AFIEQGKRME 233
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 320 FSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVA 378
++R IG+G G VY M + G EVA+++ + +E+ ++ K+ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 379 -LRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L Y L G + +V + L GSL D + + M + R L + L +L
Sbjct: 82 YLDSY------LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFL 132
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEY 496
H +IHRDIK+ NILL K+ DFG A+ PE + + GT ++APE
Sbjct: 133 HSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEV 187
Query: 497 ALYGKLTPGSDVYSFGVVLLELLSGK 522
P D++S G++ +E++ G+
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 58/266 (21%)
Query: 309 KIEEIKAATMNFSRENIIGKGGYGNVYKGML--PNGTE----VAVKRFKNCSKAG-DANF 361
K++EI + + F E +G+ +G VYKG L P E VA+K K+ ++ F
Sbjct: 2 KLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 59
Query: 362 KHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLF--------GS 413
+HE + A ++H N+V L G T PL ++ +G L++ L GS
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLS-----MIFSYCSHGDLHEFLVMRSPHSDVGS 114
Query: 414 G------MKKLSWPIRLRIALGTARGLAYL--HYGVQPAIIHRDIKASNILLDEAFEAKV 465
L P + + A G+ YL H+ ++H+D+ N+L+ + K+
Sbjct: 115 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKI 169
Query: 466 GDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
D GL + + G + L R ++APE +YGK + SD++S+GVVL E+
Sbjct: 170 SDLGLFREVYAADYYKLLGNSLLPIR------WMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
Query: 519 L----------SGKKACEIIQGKSVL 534
S + E+I+ + VL
Sbjct: 224 FSYGLQPYCGYSNQDVVEMIRNRQVL 249
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 325 IIGKGGYGNVYKGMLPN----GTEVAVKRFK-NCSKAGDANFKHEVEIIASVKHVNLVAL 379
I+G+G +G VY+G+ N VAVK K +C+ F E I+ ++ H ++V L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
G +E I+ +L G L H L + +L + +AYL
Sbjct: 75 IGI------IEEEPTWIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAYLE- 126
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALY 499
+HRDI NIL+ K+GDFGL+++ + + + + +++PE +
Sbjct: 127 --SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 184
Query: 500 GKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSVL 534
+ T SDV+ F V + E+LS GK+ ++ K V+
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 220
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 313 IKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVK 372
I + F +E +G G +G V G +VA+K K S + D F E +++ ++
Sbjct: 1 IDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLS 57
Query: 373 HVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR 432
H LV L G T P+ I+ + + NG L ++L + L +
Sbjct: 58 HEKLVQLYGVCTKQRPI-----FIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCE 111
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYV 492
+ YL +HRD+ A N L+++ KV DFGL+++ + + + +
Sbjct: 112 AMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS 168
Query: 493 APEYALYGKLTPGSDVYSFGVVLLELLS 520
PE +Y K + SD+++FGV++ E+ S
Sbjct: 169 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 104/216 (48%), Gaps = 38/216 (17%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV--KHVNLVALRGYS 383
IGKG +G V++G G EVAVK F S + ++ E EI +V +H N++ G+
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENIL---GFI 63
Query: 384 TATVPLEGH--QRIIVCDLLHNGSLYDHLFG-----SGMKKLSWPIRLRIALGTARGLAY 436
A G Q +V D +GSL+D+L GM KL AL TA GLA+
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--------ALSTASGLAH 115
Query: 437 LHYGV-----QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNP---EGITHLTTRVAGT 488
LH + +PAI HRD+K+ NIL+ + + D GLA + + I GT
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175
Query: 489 LGYVAPEY------ALYGKLTPGSDVYSFGVVLLEL 518
Y+APE + + +D+Y+ G+V E+
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 103/216 (47%), Gaps = 38/216 (17%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV--KHVNLVALRGYS 383
IGKG +G V++G G EVAVK F S + ++ E EI +V +H N++ G+
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENIL---GFI 64
Query: 384 TATVPLEGH--QRIIVCDLLHNGSLYDHLFG-----SGMKKLSWPIRLRIALGTARGLAY 436
A G Q +V D +GSL+D+L GM KL AL TA GLA+
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--------ALSTASGLAH 116
Query: 437 LHYGV-----QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLT---TRVAGT 488
LH + +PAI HRD+K+ NIL+ + + D GLA + + GT
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 176
Query: 489 LGYVAPEY------ALYGKLTPGSDVYSFGVVLLEL 518
Y+APE + + +D+Y+ G+V E+
Sbjct: 177 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 320 FSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVA 378
++R IG+G G VY M + G EVA+++ + +E+ ++ K+ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 379 -LRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L Y L G + +V + L GSL D + + M + R L + L +L
Sbjct: 82 YLDSY------LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFL 132
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEY 496
H +IHRDIK+ NILL K+ DFG A+ PE + + GT ++APE
Sbjct: 133 HSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEV 187
Query: 497 ALYGKLTPGSDVYSFGVVLLELLSGK 522
P D++S G++ +E++ G+
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKG--MLPN--GTEVAVKRFKNC-SKAGDANFKHEVE 366
EI+ + R IG+G +G+V++G M P VA+K KNC S + F E
Sbjct: 6 EIQRERIELGR--CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 367 IIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI 426
+ H ++V L G T P+ I+ +L G L L ++K S + I
Sbjct: 64 TMRQFDHPHIVKLIGVITEN-PV-----WIIMELCTLGELRSFL---QVRKFSLDLASLI 114
Query: 427 --ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR 484
A + LAYL +HRDI A N+L+ K+GDFGL+++ + + ++
Sbjct: 115 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLE-LLSGKKACEIIQGKSVL 534
+ ++APE + + T SDV+ FGV + E L+ G K + ++ V+
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 28/209 (13%)
Query: 326 IGKGGYGNV----YKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+GKG +G+V Y + N G VAVK+ ++ +F+ E++I+ ++ +V R
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY---- 436
G S P R+++ + L +G L D L R R L +R L Y
Sbjct: 75 GVSYG--PGRPELRLVM-EYLPSGCLRDFL-----------QRHRARLDASRLLLYSSQI 120
Query: 437 ---LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT--LGY 491
+ Y +HRD+ A NIL++ K+ DFGLAK P R G + +
Sbjct: 121 CKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLS 520
APE + SDV+SFGVVL EL +
Sbjct: 181 YAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 320 FSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVA 378
++R IG+G G VY M + G EVA+++ + +E+ ++ K+ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 379 -LRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L Y L G + +V + L GSL D + + M + R L + L +L
Sbjct: 83 YLDSY------LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFL 133
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEY 496
H +IHRDIK+ NILL K+ DFG A+ PE + + GT ++APE
Sbjct: 134 HSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEV 188
Query: 497 ALYGKLTPGSDVYSFGVVLLELLSGK 522
P D++S G++ +E++ G+
Sbjct: 189 VTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 325 IIGKGGYGNVYKGMLPN----GTEVAVKRFK-NCSKAGDANFKHEVEIIASVKHVNLVAL 379
I+G+G +G VY+G+ N VAVK K +C+ F E I+ ++ H ++V L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
G +E I+ +L G L H L + +L + +AYL
Sbjct: 91 IGI------IEEEPTWIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAYLE- 142
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALY 499
+HRDI NIL+ K+GDFGL+++ + + + + +++PE +
Sbjct: 143 --SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 200
Query: 500 GKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSVL 534
+ T SDV+ F V + E+LS GK+ ++ K V+
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 140
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPE-GITHLTTRVAG 487
A+G+ +L +HRD+ A N +LDE F KV DFGLA+ ++ E H T
Sbjct: 141 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 197
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 325 IIGKGGYGNVYKGMLPN----GTEVAVKRFK-NCSKAGDANFKHEVEIIASVKHVNLVAL 379
I+G+G +G VY+G+ N VAVK K +C+ F E I+ ++ H ++V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
G +E I+ +L G L H L + +L + +AYL
Sbjct: 79 IGI------IEEEPTWIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAYLE- 130
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALY 499
+HRDI NIL+ K+GDFGL+++ + + + + +++PE +
Sbjct: 131 --SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINF 188
Query: 500 GKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSVL 534
+ T SDV+ F V + E+LS GK+ ++ K V+
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 224
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 103/216 (47%), Gaps = 38/216 (17%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV--KHVNLVALRGYS 383
IGKG +G V++G G EVAVK F S + ++ E EI +V +H N++ G+
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENIL---GFI 69
Query: 384 TATVPLEGH--QRIIVCDLLHNGSLYDHLFG-----SGMKKLSWPIRLRIALGTARGLAY 436
A G Q +V D +GSL+D+L GM KL AL TA GLA+
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--------ALSTASGLAH 121
Query: 437 LHYGV-----QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLT---TRVAGT 488
LH + +PAI HRD+K+ NIL+ + + D GLA + + GT
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 181
Query: 489 LGYVAPEY------ALYGKLTPGSDVYSFGVVLLEL 518
Y+APE + + +D+Y+ G+V E+
Sbjct: 182 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 143
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPE-GITHLTTRVAG 487
A+G+ +L +HRD+ A N +LDE F KV DFGLA+ ++ E H T
Sbjct: 144 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 200
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 142
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPE-GITHLTTRVAG 487
A+G+ +L +HRD+ A N +LDE F KV DFGLA+ ++ E H T
Sbjct: 143 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 199
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 147
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPE-GITHLTTRVAG 487
A+G+ +L +HRD+ A N +LDE F KV DFGLA+ ++ E H T
Sbjct: 148 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 204
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 205 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 103/216 (47%), Gaps = 38/216 (17%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV--KHVNLVALRGYS 383
IGKG +G V++G G EVAVK F S + ++ E EI +V +H N++ G+
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENIL---GFI 89
Query: 384 TATVPLEGH--QRIIVCDLLHNGSLYDHLFG-----SGMKKLSWPIRLRIALGTARGLAY 436
A G Q +V D +GSL+D+L GM KL AL TA GLA+
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--------ALSTASGLAH 141
Query: 437 LHYGV-----QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLT---TRVAGT 488
LH + +PAI HRD+K+ NIL+ + + D GLA + + GT
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 201
Query: 489 LGYVAPEY------ALYGKLTPGSDVYSFGVVLLEL 518
Y+APE + + +D+Y+ G+V E+
Sbjct: 202 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 104/216 (48%), Gaps = 38/216 (17%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV--KHVNLVALRGYS 383
IGKG +G V++G G EVAVK F S + ++ E EI +V +H N++ G+
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENIL---GFI 102
Query: 384 TATVPLEGH--QRIIVCDLLHNGSLYDHLFG-----SGMKKLSWPIRLRIALGTARGLAY 436
A G Q +V D +GSL+D+L GM KL AL TA GLA+
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--------ALSTASGLAH 154
Query: 437 LHYGV-----QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNP---EGITHLTTRVAGT 488
LH + +PAI HRD+K+ NIL+ + + D GLA + + I GT
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 214
Query: 489 LGYVAPEY------ALYGKLTPGSDVYSFGVVLLEL 518
Y+APE + + +D+Y+ G+V E+
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 103/216 (47%), Gaps = 38/216 (17%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASV--KHVNLVALRGYS 383
IGKG +G V++G G EVAVK F S + ++ E EI +V +H N++ G+
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENIL---GFI 66
Query: 384 TATVPLEGH--QRIIVCDLLHNGSLYDHLFG-----SGMKKLSWPIRLRIALGTARGLAY 436
A G Q +V D +GSL+D+L GM KL AL TA GLA+
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL--------ALSTASGLAH 118
Query: 437 LHYGV-----QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLT---TRVAGT 488
LH + +PAI HRD+K+ NIL+ + + D GLA + + GT
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 178
Query: 489 LGYVAPEY------ALYGKLTPGSDVYSFGVVLLEL 518
Y+APE + + +D+Y+ G+V E+
Sbjct: 179 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 314 KAATMNFSRENIIGKGGYGNVY---KGMLPN-GTEVAVKRFKNCS-KAGD-ANFKHEVEI 367
KA +F ++G+G +G V+ K P+ G A+K K + K D K E +I
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 368 IASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIA 427
+A V H +V L Y+ T EG + ++ D L G L+ L M ++ +A
Sbjct: 84 LADVNHPFVVKLH-YAFQT---EG-KLYLILDFLRGGDLFTRLSKEVMFT-EEDVKFYLA 137
Query: 428 LGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVA- 486
A GL +LH II+RD+K NILLDE K+ DFGL+K E I H +
Sbjct: 138 -ELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSF 190
Query: 487 -GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
GT+ Y+APE + +D +S+GV++ E+L+G
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 324 NIIGKGGYGNVY--KGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRG 381
++G G + V+ K L G A+K K D++ ++E+ ++ +KH N+V L
Sbjct: 15 EVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM---KKLSWPIRLRIALGTARGLAYLH 438
+T +V L+ G L+D + G+ K S I+ ++ + YLH
Sbjct: 74 IYESTT-----HYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLS-----AVKYLH 123
Query: 439 YGVQPAIIHRDIKASNILL---DEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ I+HRD+K N+L +E + + DFGL+K GI + GT GYVAPE
Sbjct: 124 ---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM---STACGTPGYVAPE 177
Query: 496 YALYGKLTPGSDVYSFGVVLLELLSG 521
+ D +S GV+ LL G
Sbjct: 178 VLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 110/249 (44%), Gaps = 40/249 (16%)
Query: 294 PSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGML------PNGTEVAV 347
P+ ++S+++ K E+ + R +G G +G VY+G + P+ +VAV
Sbjct: 25 PNYCFAGKTSSISDLK--EVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAV 80
Query: 348 KRFKNC-SKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL 406
K S+ + +F E II+ H N+V G S ++P R I+ +L+ G L
Sbjct: 81 KTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-----RFILLELMAGGDL 135
Query: 407 YDHLF-----GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILL---D 458
L S L+ L +A A G YL + IHRDI A N LL
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPG 192
Query: 459 EAFEAKVGDFGLAK-------FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSF 511
AK+GDFG+A+ + G L + ++ PE + G T +D +SF
Sbjct: 193 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK------WMPPEAFMEGIFTSKTDTWSF 246
Query: 512 GVVLLELLS 520
GV+L E+ S
Sbjct: 247 GVLLWEIFS 255
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 142
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPE-GITHLTTRVAG 487
A+G+ +L +HRD+ A N +LDE F KV DFGLA+ ++ E H T
Sbjct: 143 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 199
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G +Y L +KLS R A
Sbjct: 71 RHPNILRLYGYFHDATRV-----YLILEYAPRGEVYKEL-----QKLSKFDEQRTATYIT 120
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T + GT
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGT 174
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 175 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKG--MLPN--GTEVAVKRFKNC-SKAGDANFKHEVE 366
EI+ + R IG+G +G+V++G M P VA+K KNC S + F E
Sbjct: 6 EIQRERIELGR--CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 367 IIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI 426
+ H ++V L G T P+ I+ +L G L L ++K S + I
Sbjct: 64 TMRQFDHPHIVKLIGVITEN-PV-----WIIMELCTLGELRSFL---QVRKFSLDLASLI 114
Query: 427 --ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR 484
A + LAYL +HRDI A N+L+ K+GDFGL+++ + ++
Sbjct: 115 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASK 171
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLE-LLSGKKACEIIQGKSVL 534
+ ++APE + + T SDV+ FGV + E L+ G K + ++ V+
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 201
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPE-GITHLTTRVAG 487
A+G+ +L +HRD+ A N +LDE F KV DFGLA+ ++ E H T
Sbjct: 202 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 258
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 259 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKG--MLPN--GTEVAVKRFKNC-SKAGDANFKHEVE 366
EI+ + R IG+G +G+V++G M P VA+K KNC S + F E
Sbjct: 6 EIQRERIELGR--CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 367 IIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI 426
+ H ++V L G T P+ I+ +L G L L ++K S + I
Sbjct: 64 TMRQFDHPHIVKLIGVITEN-PV-----WIIMELCTLGELRSFL---QVRKYSLDLASLI 114
Query: 427 --ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR 484
A + LAYL +HRDI A N+L+ K+GDFGL+++ + + ++
Sbjct: 115 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLE-LLSGKKACEIIQGKSVL 534
+ ++APE + + T SDV+ FGV + E L+ G K + ++ V+
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 320 FSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVA 378
++R IG+G G VY M + G EVA+++ + +E+ ++ K+ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 379 -LRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L Y L G + +V + L GSL D + + M + R L + L +L
Sbjct: 83 YLDSY------LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFL 133
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEY 496
H +IHR+IK+ NILL K+ DFG A+ PE T + GT ++APE
Sbjct: 134 HSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEV 188
Query: 497 ALYGKLTPGSDVYSFGVVLLELLSGK 522
P D++S G++ +E++ G+
Sbjct: 189 VTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 34/213 (15%)
Query: 325 IIGKGGYGNVYKGML--PNGTEV--AVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVAL 379
+IG+G +G VY G L +G ++ AVK + G+ + F E I+ H N+++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 380 RG--YSTATVPL-------EGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGT 430
G + PL G R + + HN ++ D L G G++
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD-LIGFGLQ-------------V 143
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPE-GITHLTTRVAG 487
A+G+ +L +HRD+ A N +LDE F KV DFGLA+ + E H T
Sbjct: 144 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL 200
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E K T SDV+SFGV+L EL++
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKG--MLPN--GTEVAVKRFKNC-SKAGDANFKHEVE 366
EI+ + R IG+G +G+V++G M P VA+K KNC S + F E
Sbjct: 8 EIQRERIELGR--CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 367 IIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI 426
+ H ++V L G T P+ I+ +L G L L ++K S + I
Sbjct: 66 TMRQFDHPHIVKLIGVITEN-PV-----WIIMELCTLGELRSFL---QVRKYSLDLASLI 116
Query: 427 --ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR 484
A + LAYL +HRDI A N+L+ K+GDFGL+++ + + ++
Sbjct: 117 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 173
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLE-LLSGKKACEIIQGKSVL 534
+ ++APE + + T SDV+ FGV + E L+ G K + ++ V+
Sbjct: 174 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 224
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKG--MLPN--GTEVAVKRFKNC-SKAGDANFKHEVE 366
EI+ + R IG+G +G+V++G M P VA+K KNC S + F E
Sbjct: 3 EIQRERIELGR--CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 367 IIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI 426
+ H ++V L G T P+ I+ +L G L L ++K S + I
Sbjct: 61 TMRQFDHPHIVKLIGVITEN-PV-----WIIMELCTLGELRSFL---QVRKYSLDLASLI 111
Query: 427 --ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR 484
A + LAYL +HRDI A N+L+ K+GDFGL+++ + + ++
Sbjct: 112 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 168
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLE-LLSGKKACEIIQGKSVL 534
+ ++APE + + T SDV+ FGV + E L+ G K + ++ V+
Sbjct: 169 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 219
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKG--MLPN--GTEVAVKRFKNC-SKAGDANFKHEVE 366
EI+ + R IG+G +G+V++G M P VA+K KNC S + F E
Sbjct: 6 EIQRERIELGR--CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 367 IIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI 426
+ H ++V L G T P+ I+ +L G L L ++K S + I
Sbjct: 64 TMRQFDHPHIVKLIGVITEN-PV-----WIIMELCTLGELRSFL---QVRKYSLDLASLI 114
Query: 427 --ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR 484
A + LAYL +HRDI A N+L+ K+GDFGL+++ + + ++
Sbjct: 115 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLE-LLSGKKACEIIQGKSVL 534
+ ++APE + + T SDV+ FGV + E L+ G K + ++ V+
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 95/201 (47%), Gaps = 22/201 (10%)
Query: 326 IGKGGYGNVYKGMLPNGT-EVAVKRFKN--CSKAGDANFKHEVEIIASVKHVNLVALRGY 382
IG+G + VYKG+ T EVA ++ +K+ FK E E + ++H N+V R Y
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIV--RFY 91
Query: 383 STATVPLEGHQRII-VCDLLHNGSLYDHLFGSGMKKL----SWPIRLRIALGTARGLAYL 437
+ ++G + I+ V +L +G+L +L + K+ SW ++ +GL +L
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFL 145
Query: 438 HYGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEY 496
H P IIHRD+K NI + K+GD GLA V GT + APE
Sbjct: 146 HTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR---ASFAKAVIGTPEFXAPE- 200
Query: 497 ALYGKLTPGSDVYSFGVVLLE 517
K DVY+FG LE
Sbjct: 201 XYEEKYDESVDVYAFGXCXLE 221
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKG--MLPN--GTEVAVKRFKNC-SKAGDANFKHEVE 366
EI+ + R IG+G +G+V++G M P VA+K KNC S + F E
Sbjct: 9 EIQRERIELGR--CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 367 IIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI 426
+ H ++V L G T P+ I+ +L G L L ++K S + I
Sbjct: 67 TMRQFDHPHIVKLIGVITEN-PV-----WIIMELCTLGELRSFL---QVRKYSLDLASLI 117
Query: 427 --ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR 484
A + LAYL +HRDI A N+L+ K+GDFGL+++ + + ++
Sbjct: 118 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 174
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLE-LLSGKKACEIIQGKSVL 534
+ ++APE + + T SDV+ FGV + E L+ G K + ++ V+
Sbjct: 175 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 225
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 27/249 (10%)
Query: 307 RFKIEEIKAATMN-FSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKA--------- 356
++K E + T N F + ++GKGG+G V + A + C K
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQV-----RATGKMYACKKLEKKRIKKRK 226
Query: 357 GDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMK 416
G+A +E +I+ V +V+L Y+ T +V L++ G L H++ G
Sbjct: 227 GEAMALNEKQILEKVNSRFVVSL-AYAYET----KDALCLVLTLMNGGDLKFHIYHMGQA 281
Query: 417 KLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE 476
+ A GL LH + I++RD+K NILLD+ ++ D GLA PE
Sbjct: 282 GFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338
Query: 477 GITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLS 536
G T + RV GT+GY+APE + T D ++ G +L E+++G+ + Q K +
Sbjct: 339 GQT-IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ--QRKKKIKR 394
Query: 537 DWAWELVKE 545
+ LVKE
Sbjct: 395 EEVERLVKE 403
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKG--MLPN--GTEVAVKRFKNC-SKAGDANFKHEVE 366
EI+ + R IG+G +G+V++G M P VA+K KNC S + F E
Sbjct: 34 EIQRERIELGR--CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 91
Query: 367 IIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI 426
+ H ++V L G T P+ I+ +L G L L ++K S + I
Sbjct: 92 TMRQFDHPHIVKLIGVITEN-PV-----WIIMELCTLGELRSFL---QVRKYSLDLASLI 142
Query: 427 --ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR 484
A + LAYL +HRDI A N+L+ K+GDFGL+++ + + ++
Sbjct: 143 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 199
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLE-LLSGKKACEIIQGKSVL 534
+ ++APE + + T SDV+ FGV + E L+ G K + ++ V+
Sbjct: 200 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 250
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 66 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 115
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T + GT
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTELCGT 169
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 170 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 102/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY N + + FK KAG + + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + + ++ + G++Y L +KLS R A
Sbjct: 66 RHPNILRLYGYFHDSTRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 115
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + + GT
Sbjct: 116 ELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAALCGT 169
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 170 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 105/216 (48%), Gaps = 21/216 (9%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTEV----AVKRFKNCS-KAGD-ANFKHEVEI 367
KA F ++G+G +G V+ +G++ A+K K + K D K E +I
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 368 IASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIA 427
+ V H +V L Y+ T EG + ++ D L G L+ L M ++ +A
Sbjct: 80 LVEVNHPFIVKLH-YAFQT---EG-KLYLILDFLRGGDLFTRLSKEVMFT-EEDVKFYLA 133
Query: 428 LGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVA- 486
A L +LH II+RD+K NILLDE K+ DFGL+K E I H +
Sbjct: 134 -ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSF 186
Query: 487 -GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
GT+ Y+APE T +D +SFGV++ E+L+G
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 98/209 (46%), Gaps = 25/209 (11%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASVKHVNLVALRG 381
+GKG +GNVY + + FK KAG + + EVEI + ++H N++ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL---GTARGLAYLH 438
Y + ++ + G++Y L +KLS R A A L+Y H
Sbjct: 93 YFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYITELANALSYCH 142
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL 498
+IHRDIK N+LL A E K+ DFG + P + T + GTL Y+ PE +
Sbjct: 143 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPE-MI 195
Query: 499 YGKLTPGS-DVYSFGVVLLELLSGKKACE 526
G++ D++S GV+ E L GK E
Sbjct: 196 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 92 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 141
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T + GT
Sbjct: 142 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGT 195
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 196 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 27/249 (10%)
Query: 307 RFKIEEIKAATMN-FSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKA--------- 356
++K E + T N F + ++GKGG+G V + A + C K
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQV-----RATGKMYACKKLEKKRIKKRK 226
Query: 357 GDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMK 416
G+A +E +I+ V +V+L Y+ T +V L++ G L H++ G
Sbjct: 227 GEAMALNEKQILEKVNSRFVVSL-AYAYET----KDALCLVLTLMNGGDLKFHIYHMGQA 281
Query: 417 KLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE 476
+ A GL LH + I++RD+K NILLD+ ++ D GLA PE
Sbjct: 282 GFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338
Query: 477 GITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLS 536
G T + RV GT+GY+APE + T D ++ G +L E+++G+ + Q K +
Sbjct: 339 GQT-IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ--QRKKKIKR 394
Query: 537 DWAWELVKE 545
+ LVKE
Sbjct: 395 EEVERLVKE 403
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKG--MLPN--GTEVAVKRFKNC-SKAGDANFKHEVE 366
EI+ + R IG+G +G+V++G M P VA+K KNC S + F E
Sbjct: 11 EIQRERIELGR--CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 367 IIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI 426
+ H ++V L G T P+ I+ +L G L L ++K S + I
Sbjct: 69 TMRQFDHPHIVKLIGVITEN-PV-----WIIMELCTLGELRSFL---QVRKYSLDLASLI 119
Query: 427 --ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR 484
A + LAYL +HRDI A N+L+ K+GDFGL+++ + + ++
Sbjct: 120 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 176
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLE-LLSGKKACEIIQGKSVL 534
+ ++APE + + T SDV+ FGV + E L+ G K + ++ V+
Sbjct: 177 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 227
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 69 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 118
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T + GT
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGT 172
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 173 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 102/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 67 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 116
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T ++GT
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAP---SSRRTTLSGT 170
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 171 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 67 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 116
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T + GT
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGT 170
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 171 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 71 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 120
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T + GT
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGT 174
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 175 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 25/236 (10%)
Query: 293 EPSLVLESRSSNLAR-FKIEEIKAATMNFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRF 350
EP E + LAR FK E++ + ++G G +G V+KG+ +P G + +
Sbjct: 12 EPLDPSEKANKVLARIFKETELR-------KLKVLGSGVFGTVHKGVWIPEGESIKIPVC 64
Query: 351 KNC--SKAGDANFKHEVE---IIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGS 405
K+G +F+ + I S+ H ++V L G G +V L GS
Sbjct: 65 IKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP------GSSLQLVTQYLPLGS 118
Query: 406 LYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKV 465
L DH+ L + L + A+G+ YL + ++HR++ A N+LL + +V
Sbjct: 119 LLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQV 174
Query: 466 GDFGLAKFNPEGITHLTTRVAGT-LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
DFG+A P L A T + ++A E +GK T SDV+S+GV + EL++
Sbjct: 175 ADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 66 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 115
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T + GT
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGT 169
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 170 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 105/216 (48%), Gaps = 21/216 (9%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTEV----AVKRFKNCS-KAGD-ANFKHEVEI 367
KA F ++G+G +G V+ +G++ A+K K + K D K E +I
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 368 IASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIA 427
+ V H +V L Y+ T EG + ++ D L G L+ L M ++ +A
Sbjct: 80 LVEVNHPFIVKLH-YAFQT---EG-KLYLILDFLRGGDLFTRLSKEVMFT-EEDVKFYLA 133
Query: 428 LGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVA- 486
A L +LH II+RD+K NILLDE K+ DFGL+K E I H +
Sbjct: 134 -ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSF 186
Query: 487 -GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
GT+ Y+APE T +D +SFGV++ E+L+G
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 66 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 115
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T + GT
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGT 169
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 170 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 97/218 (44%), Gaps = 23/218 (10%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 71 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 120
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T + GT
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGT 174
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACE 526
L Y+ PE D++S GV+ E L GK E
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 98/216 (45%), Gaps = 19/216 (8%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTA 431
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 66 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 115
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
L Y +IHRDIK N+LL A E K+ DFG + P + T + GTL Y
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDY 172
Query: 492 VAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
+ PE + G++ D++S GV+ E L GK E
Sbjct: 173 LPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 71 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 120
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T + GT
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGT 174
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 175 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 105/216 (48%), Gaps = 21/216 (9%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTEV----AVKRFKNCS-KAGD-ANFKHEVEI 367
KA F ++G+G +G V+ +G++ A+K K + K D K E +I
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 80
Query: 368 IASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIA 427
+ V H +V L Y+ T EG + ++ D L G L+ L M ++ +A
Sbjct: 81 LVEVNHPFIVKLH-YAFQT---EG-KLYLILDFLRGGDLFTRLSKEVMFT-EEDVKFYLA 134
Query: 428 LGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVA- 486
A L +LH II+RD+K NILLDE K+ DFGL+K E I H +
Sbjct: 135 -ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSF 187
Query: 487 -GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
GT+ Y+APE T +D +SFGV++ E+L+G
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 102/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + + ++ + G++Y L +KLS R A
Sbjct: 65 RHPNILRLYGYFH-----DATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 114
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T + GT
Sbjct: 115 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGT 168
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 169 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 141/312 (45%), Gaps = 59/312 (18%)
Query: 326 IGKGGYGNVYKGML-------PNG-TEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V PN T+VAVK K+ + D ++ E+E++ + KH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG--------------SGMKKLSWP 421
++ L G T PL ++ + G+L ++L + ++LS
Sbjct: 96 IINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ A ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ I H+
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHI 203
Query: 482 -----TTRVAGTLGYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVL 534
TT + ++APE AL+ ++ T SDV+SFGV+L E+ + G + + +
Sbjct: 204 DYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 535 LSDWAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 263 ------KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 595 TDVPLSNIKIFL 606
V L++ + +L
Sbjct: 308 RIVALTSNQEYL 319
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 69 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 118
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T + GT
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGT 172
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 173 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 66 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 115
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T + GT
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTXLCGT 169
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 170 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 35/230 (15%)
Query: 320 FSRENIIGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEI 367
+++ IG+G YG V Y + T VA+K+ + F+H E++I
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHV--RKTRVAIKKI--------SPFEHQTYCQRTLREIQI 94
Query: 368 IASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIA 427
+ +H N++ +R A+ LE + + + L LY L ++LS
Sbjct: 95 LLRFRHENVIGIRDILRAST-LEAMRDVYIVQDLMETDLYKLL---KSQQLSNDHICYFL 150
Query: 428 LGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF-NPE-GITHLTTRV 485
RGL Y+H ++HRD+K SN+L++ + K+ DFGLA+ +PE T T
Sbjct: 151 YQILRGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEX 207
Query: 486 AGTLGYVAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
T Y APE L K T D++S G +L E+LS + I GK L
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 254
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 99/219 (45%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G +Y L +KLS R A
Sbjct: 71 RHPNILRLYGYFHDATRV-----YLILEYAPRGEVYKEL-----QKLSKFDEQRTATYIT 120
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + + GT
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLXGT 174
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 175 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 137/307 (44%), Gaps = 59/307 (19%)
Query: 326 IGKGGYGNVYKGML-------PNG-TEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V PN T+VAVK K+ + D ++ E+E++ + KH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG--------------SGMKKLSWP 421
++ L G T PL ++ + G+L ++L + ++LS
Sbjct: 96 IINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ A ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ I H+
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHI 203
Query: 482 TTRVAGTLG-----YVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVL 534
T G ++APE AL+ ++ T SDV+SFGV+L E+ + G + + +
Sbjct: 204 DXXKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 535 LSDWAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 263 ------KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 595 TDVPLSN 601
V L++
Sbjct: 308 RIVALTS 314
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 70 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 119
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T + GT
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGT 173
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 174 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 29/210 (13%)
Query: 324 NIIGKGGYGNVYKGM-LPNGTEVAVKRFKNC--SKAGDANFKHEVE---IIASVKHVNLV 377
++G G +G V+KG+ +P G + + K+G +F+ + I S+ H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLRIALGTA 431
L G G +V L GSL DH+ G + L+W +++ A
Sbjct: 79 RLLGLCP------GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLL-LNWGVQI------A 125
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT-LG 490
+G+ YL + ++HR++ A N+LL + +V DFG+A P L A T +
Sbjct: 126 KGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 182
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
++A E +GK T SDV+S+GV + EL++
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 59/307 (19%)
Query: 326 IGKGGYGNVYKGML-------PNG-TEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V PN T+VAVK K+ + D ++ E+E++ + KH N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG--------------SGMKKLSWP 421
++ L G T PL ++ + G+L ++L + ++LS
Sbjct: 81 IINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ A ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ I H+
Sbjct: 136 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHI 188
Query: 482 -----TTRVAGTLGYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVL 534
TT + ++APE AL+ ++ T SDV+SFGV+L E+ + G + + +
Sbjct: 189 DYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 247
Query: 535 LSDWAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 248 ------KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292
Query: 595 TDVPLSN 601
V L++
Sbjct: 293 RIVALTS 299
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 30/218 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNV----------YKGMLPNGTEVAVKRFKNCSKAGDANFKH 363
K + +F +G G +G V Y M E+ V R K D
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERL-- 58
Query: 364 EVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIR 423
+++ V H ++ + G + Q ++ D + G L+ L S ++ P+
Sbjct: 59 ---MLSIVTHPFIIRMWGTFQ-----DAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVA 108
Query: 424 LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT 483
A L YLH II+RD+K NILLD+ K+ DFG AK+ P+ +T
Sbjct: 109 KFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTY 161
Query: 484 RVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
+ GT Y+APE D +SFG+++ E+L+G
Sbjct: 162 XLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 63 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 112
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + T + GT
Sbjct: 113 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGT 166
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 167 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 59/307 (19%)
Query: 326 IGKGGYGNVYKGML-------PNG-TEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V PN T+VAVK K+ + D ++ E+E++ + KH N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG--------------SGMKKLSWP 421
++ L G T PL ++ + G+L ++L + ++LS
Sbjct: 85 IINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ A ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ I H+
Sbjct: 140 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHI 192
Query: 482 -----TTRVAGTLGYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVL 534
TT + ++APE AL+ ++ T SDV+SFGV+L E+ + G + + +
Sbjct: 193 DYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 251
Query: 535 LSDWAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 252 ------KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 296
Query: 595 TDVPLSN 601
V L++
Sbjct: 297 RIVALTS 303
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 59/307 (19%)
Query: 326 IGKGGYGNVYKGML-------PNG-TEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V PN T+VAVK K+ + D ++ E+E++ + KH N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG--------------SGMKKLSWP 421
++ L G T PL ++ + G+L ++L + ++LS
Sbjct: 89 IINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ A ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ I H+
Sbjct: 144 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHI 196
Query: 482 -----TTRVAGTLGYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVL 534
TT + ++APE AL+ ++ T SDV+SFGV+L E+ + G + + +
Sbjct: 197 DYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 255
Query: 535 LSDWAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 256 ------KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 300
Query: 595 TDVPLSN 601
V L++
Sbjct: 301 RIVALTS 307
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 107/233 (45%), Gaps = 35/233 (15%)
Query: 325 IIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEI--IASVKHVNLVALRGY 382
+IG+G YG VYKG L + VAVK F S A NF +E I + ++H N +A
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDN-IARFIV 74
Query: 383 STATVPLEGH-QRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
V +G + ++V + NGSL +L + W R+A RGLAYLH +
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHTEL 131
Query: 442 ------QPAIIHRDIKASNILLDEAFEAKVGDFGLAK-------FNPEGITHLTTRVAGT 488
+PAI HRD+ + N+L+ + DFGL+ P + GT
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 489 LGYVAPEYALYGKLT--------PGSDVYSFGVVLLELLSGKKACEIIQGKSV 533
+ Y+APE L G + D+Y+ G++ E+ + ++ G+SV
Sbjct: 192 IRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF--MRCTDLFPGESV 241
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 59/307 (19%)
Query: 326 IGKGGYGNVYKGML-------PNG-TEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V PN T+VAVK K+ + D ++ E+E++ + KH N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG--------------SGMKKLSWP 421
++ L G T PL ++ + G+L ++L + ++LS
Sbjct: 88 IINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ A ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ I H+
Sbjct: 143 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHI 195
Query: 482 -----TTRVAGTLGYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVL 534
TT + ++APE AL+ ++ T SDV+SFGV+L E+ + G + + +
Sbjct: 196 DYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 254
Query: 535 LSDWAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 255 ------KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 299
Query: 595 TDVPLSN 601
V L++
Sbjct: 300 RIVALTS 306
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 59/307 (19%)
Query: 326 IGKGGYGNVYKGML-------PNG-TEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V PN T+VAVK K+ + D ++ E+E++ + KH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG--------------SGMKKLSWP 421
++ L G T PL ++ + G+L ++L + ++LS
Sbjct: 96 IINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ A ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ I H+
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHI 203
Query: 482 -----TTRVAGTLGYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVL 534
TT + ++APE AL+ ++ T SDV+SFGV+L E+ + G + + +
Sbjct: 204 DYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 535 LSDWAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 263 ------KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 595 TDVPLSN 601
V L++
Sbjct: 308 RIVALTS 314
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 59/307 (19%)
Query: 326 IGKGGYGNVYKGML-------PNG-TEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V PN T+VAVK K+ + D ++ E+E++ + KH N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG--------------SGMKKLSWP 421
++ L G T PL ++ + G+L ++L + ++LS
Sbjct: 96 IINLLGACTQDGPL-----YVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ A ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ I H+
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHI 203
Query: 482 -----TTRVAGTLGYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVL 534
TT + ++APE AL+ ++ T SDV+SFGV+L E+ + G + + +
Sbjct: 204 DYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
Query: 535 LSDWAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 263 ------KLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 595 TDVPLSN 601
V L++
Sbjct: 308 RIVALTS 314
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKR--FKNCSKAGDANFKHEVEIIASVKHVN 375
++ + +IG G V P +VA+KR + C + D K E++ ++ H N
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK-EIQAMSQCHHPN 74
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYD---HLFGSGMKK---LSWPIRLRIALG 429
+V+ Y T+ V + + +V LL GS+ D H+ G K L I
Sbjct: 75 IVS---YYTSFVVKD--ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEG--ITHLTTR--V 485
GL YLH Q IHRD+KA NILL E ++ DFG++ F G IT R
Sbjct: 130 VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 486 AGTLGYVAPEYALYGK-LTPGSDVYSFGVVLLELLSG 521
GT ++APE + +D++SFG+ +EL +G
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 59/307 (19%)
Query: 326 IGKGGYGNVYKGML-------PNG-TEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V PN T+VAVK K+ + D ++ E+E++ + KH N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG--------------SGMKKLSWP 421
++ L G T PL ++ + G+L ++L + ++LS
Sbjct: 137 IINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ A ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ I H+
Sbjct: 192 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHI 244
Query: 482 -----TTRVAGTLGYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVL 534
TT + ++APE AL+ ++ T SDV+SFGV+L E+ + G + + +
Sbjct: 245 DYYKKTTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL- 302
Query: 535 LSDWAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
++L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 303 -----FKLLKEGHRMD---------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348
Query: 595 TDVPLSN 601
V L++
Sbjct: 349 RIVALTS 355
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 68 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 117
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + + GT
Sbjct: 118 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGT 171
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 172 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 325 IIGKGGYGNVYK-GMLPNGTEVAVKRFKNCS-KAGD-ANFKHEVEIIASVKHVNLVALRG 381
++GKG +G V K E AVK S K D + EVE++ + H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL-- 86
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
+ + IV +L G L+D + K+ S RI G+ Y+H
Sbjct: 87 ---FEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMH--- 138
Query: 442 QPAIIHRDIKASNILL---DEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL 498
+ I+HRD+K NILL ++ + K+ DFGL+ + T + R+ GT Y+APE L
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VL 195
Query: 499 YGKLTPGSDVYSFGVVLLELLSG 521
G DV+S GV+L LLSG
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSG 218
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKR--FKNCSKAGDANFKHEVEIIASVKHVN 375
++ + +IG G V P +VA+KR + C + D K E++ ++ H N
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK-EIQAMSQCHHPN 69
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYD---HLFGSGMKK---LSWPIRLRIALG 429
+V+ Y T+ V + + +V LL GS+ D H+ G K L I
Sbjct: 70 IVS---YYTSFVVKD--ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEG--ITHLTTR--V 485
GL YLH Q IHRD+KA NILL E ++ DFG++ F G IT R
Sbjct: 125 VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 486 AGTLGYVAPEYALYGK-LTPGSDVYSFGVVLLELLSG 521
GT ++APE + +D++SFG+ +EL +G
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 92 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 141
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + + GT
Sbjct: 142 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRDDLCGT 195
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 196 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 68 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 117
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ +FG + P + T + GT
Sbjct: 118 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAP---SSRRTTLCGT 171
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 172 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 67 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 116
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + + GT
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRDTLCGT 170
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 171 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 69 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 118
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + + GT
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGT 172
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 173 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 326 IGKGGYGNVYKGMLPN-GTEVAVKRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
+G GG+G V + + + G +VA+K+ + S + E++I+ + H N+V+ R
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR--- 78
Query: 384 TATVPLEGHQRIIVCDL-------LHNGSLYDHL--FGSGMKKLSWPIRLRIALGTARGL 434
VP +G Q++ DL G L +L F + PIR ++ + L
Sbjct: 79 --EVP-DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSAL 134
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPEGITHLTTRVAGTLGY 491
YLH + IIHRD+K NI+L + K+ D G AK +G L T GTL Y
Sbjct: 135 RYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG--ELCTEFVGTLQY 189
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
+APE K T D +SFG + E ++G
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 69 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 118
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ +FG + P + T + GT
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAP---SSRRTTLCGT 172
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 173 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 326 IGKGGYGNVYKGMLPN-GTEVAVKRFKN-CSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
+G GG+G V + + + G +VA+K+ + S + E++I+ + H N+V+ R
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR--- 79
Query: 384 TATVPLEGHQRIIVCDL-------LHNGSLYDHL--FGSGMKKLSWPIRLRIALGTARGL 434
VP +G Q++ DL G L +L F + PIR ++ + L
Sbjct: 80 --EVP-DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSAL 135
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPEGITHLTTRVAGTLGY 491
YLH + IIHRD+K NI+L + K+ D G AK +G L T GTL Y
Sbjct: 136 RYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG--ELCTEFVGTLQY 190
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
+APE K T D +SFG + E ++G
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 69 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 118
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + + GT
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAALCGT 172
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 173 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 66 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 115
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + + GT
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGT 169
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 170 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 13/235 (5%)
Query: 295 SLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCS 354
S+ +S + +L + ++ F ++G G YG VYKG ++A + + +
Sbjct: 1 SMASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT 60
Query: 355 KAGDANFKHEVEIIASVKHVNLVALR--GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG 412
+ K E+ ++ H +A + P Q +V + GS+ D +
Sbjct: 61 GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN 120
Query: 413 SGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK 472
+ L I RGL++LH Q +IHRDIK N+LL E E K+ DFG++
Sbjct: 121 TKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 177
Query: 473 FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG------SDVYSFGVVLLELLSG 521
+ T + GT ++APE + P SD++S G+ +E+ G
Sbjct: 178 QLDRTVGRRNTFI-GTPYWMAPE-VIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 325 IIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANF----KHEVEIIASVKHVNLVAL 379
I+G GG V+ L + +VAVK + A D +F + E + A++ H +VA+
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLR-ADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
A P G IV + + +L D + G I + A L++
Sbjct: 78 YDTGEAETPA-GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-----IADACQALNF 131
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVA--GTLGYVAPEYA 497
Q IIHRD+K +NI++ KV DFG+A+ + +T A GT Y++PE A
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 498 LYGKLTPGSDVYSFGVVLLELLSGK 522
+ SDVYS G VL E+L+G+
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + + ++ + G++Y L +KLS R A
Sbjct: 66 RHPNILRLYGYFH-----DATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 115
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + + GT
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAALCGT 169
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 170 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 325 IIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANF----KHEVEIIASVKHVNLVAL 379
I+G GG V+ L + +VAVK + A D +F + E + A++ H +VA+
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLR-ADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
A P G IV + + +L D + G I + A L++
Sbjct: 78 YDTGEAETPA-GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-----IADACQALNF 131
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVA--GTLGYVAPEYA 497
Q IIHRD+K +NI++ KV DFG+A+ + +T A GT Y++PE A
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 498 LYGKLTPGSDVYSFGVVLLELLSGK 522
+ SDVYS G VL E+L+G+
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)
Query: 301 RSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRF-KNCSKAGD 358
SS+ + + E+IK F + +G G + V G AVK K K +
Sbjct: 8 ESSSSWKKQAEDIKKI---FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE 64
Query: 359 ANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM--- 415
++ ++E+ ++ +KH N+VAL + L +V L+ G L+D + G
Sbjct: 65 SSIENEIAVLRKIKHENIVALEDIYESPNHL-----YLVMQLVSGGELFDRIVEKGFYTE 119
Query: 416 KKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILL---DEAFEAKVGDFGLAK 472
K S IR + + YLH + I+HRD+K N+L DE + + DFGL+K
Sbjct: 120 KDASTLIRQVL-----DAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171
Query: 473 FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
EG + + GT GYVAPE + D +S GV+ LL G
Sbjct: 172 M--EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASV 371
A +F +GKG +GNVY + + FK KAG + + EVEI + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL--- 428
+H N++ L GY + ++ + G++Y L +KLS R A
Sbjct: 69 RHPNILRLYGYFHDATRV-----YLILEYAPLGTVYREL-----QKLSKFDEQRTATYIT 118
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
A L+Y H +IHRDIK N+LL A E K+ DFG + P + + GT
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRDDLCGT 172
Query: 489 LGYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGKKACE 526
L Y+ PE + G++ D++S GV+ E L GK E
Sbjct: 173 LDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 320 FSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVAL 379
F++ IGKG +G V+KG+ +V + + +A D + EI + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
+ Y + L+G + I+ + L GS D L + L+ L +GL YLH
Sbjct: 85 KYYGSY---LKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDYLHS 138
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALY 499
+ IHRDIKA+N+LL E + K+ DFG+A + T V GT ++APE
Sbjct: 139 EKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQ 194
Query: 500 GKLTPGSDVYSFGVVLLELLSGK 522
+D++S G+ +EL G+
Sbjct: 195 SAYDSKADIWSLGITAIELAKGE 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 86 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 136
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 137 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 188
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 189 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 136/308 (44%), Gaps = 51/308 (16%)
Query: 326 IGKGGYGNVY--------KGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V K VAVK K+ + D ++ E+E++ + KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG---SGMK-----------KLSWP 421
++ L G T PL ++ + G+L ++L GM+ ++++
Sbjct: 103 IINLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITH 480
+ ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ N
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 481 LTTRVAGTLGYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSDW 538
TT + ++APE AL+ ++ T SDV+SFGV++ E+ + G I + +
Sbjct: 215 KTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---- 269
Query: 539 AWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILETDVP 598
+L+KEG +D + + C H + RPT Q+V+ L+ +
Sbjct: 270 --KLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 599 LSNIKIFL 606
L+ + +L
Sbjct: 319 LTTNEEYL 326
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 325 IIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANF----KHEVEIIASVKHVNLVAL 379
I+G GG V+ L + +VAVK + A D +F + E + A++ H +VA+
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLR-ADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
A P G IV + + +L D + G I + A L++
Sbjct: 78 YDTGEAETPA-GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-----IADACQALNF 131
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL--TTRVAGTLGYVAPEYA 497
Q IIHRD+K +NIL+ KV DFG+A+ + + T V GT Y++PE A
Sbjct: 132 SHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
Query: 498 LYGKLTPGSDVYSFGVVLLELLSGK 522
+ SDVYS G VL E+L+G+
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
IG G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 92
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 93 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 144 KYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRA 195
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 325 IIGKGGYGNVYK-GMLPNGTEVAVKRFKNCS-KAGD-ANFKHEVEIIASVKHVNLVALRG 381
++GKG +G V K E AVK S K D + EVE++ + H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL-- 86
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
+ + IV +L G L+D + K+ S RI G+ Y+H
Sbjct: 87 ---FEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMH--- 138
Query: 442 QPAIIHRDIKASNILL---DEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL 498
+ I+HRD+K NILL ++ + K+ DFGL+ + T + R+ GT Y+APE L
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VL 195
Query: 499 YGKLTPGSDVYSFGVVLLELLSG 521
G DV+S GV+L LLSG
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSG 218
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 76 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 126
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 127 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 325 IIGKGGYGNVYK-GMLPNGTEVAVKRFKNCS-KAGD-ANFKHEVEIIASVKHVNLVALRG 381
++GKG +G V K E AVK S K D + EVE++ + H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL-- 86
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
+ + IV +L G L+D + K+ S RI G+ Y+H
Sbjct: 87 ---FEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMH--- 138
Query: 442 QPAIIHRDIKASNILL---DEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL 498
+ I+HRD+K NILL ++ + K+ DFGL+ + T + R+ GT Y+APE L
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VL 195
Query: 499 YGKLTPGSDVYSFGVVLLELLSG 521
G DV+S GV+L LLSG
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSG 218
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 70 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 120
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 121 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 172
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 173 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 20/219 (9%)
Query: 324 NIIGKGGYGNVYKGM-LPNGTEV----AVKRFK-NCSKAGDANFKHEVEIIASVKHVNLV 377
++G G +G VYKG+ +P+G V A+K + N S + E ++A V +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 378 ALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY 436
L G T+TV L V L+ G L DH+ +L L + A+G++Y
Sbjct: 83 RLLGICLTSTVQL-------VTQLMPYGCLLDHVR-ENRGRLGSQDLLNWCMQIAKGMSY 134
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPE 495
L ++HRD+ A N+L+ K+ DFGLA+ + + + + ++A E
Sbjct: 135 LE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 496 YALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSV 533
L + T SDV+S+GV + EL++ G K + I + +
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI 230
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 136/308 (44%), Gaps = 51/308 (16%)
Query: 326 IGKGGYGNVY--------KGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V K VAVK K+ + D ++ E+E++ + KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG---SGMK-----------KLSWP 421
++ L G T PL ++ + G+L ++L GM+ ++++
Sbjct: 103 IINLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITH 480
+ ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ N
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 481 LTTRVAGTLGYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSDW 538
TT + ++APE AL+ ++ T SDV+SFGV++ E+ + G I + +
Sbjct: 215 KTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---- 269
Query: 539 AWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILETDVP 598
+L+KEG +D + + C H + RPT Q+V+ L+ +
Sbjct: 270 --KLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 599 LSNIKIFL 606
L+ + +L
Sbjct: 319 LTTNEEYL 326
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 76 NPHVCRLLGICLTSTVQL-------ITQLMPFGXLLDYVREHKDNIGS-QYLLNWCVQI- 126
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 127 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 76 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 126
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 127 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGD-ANFKHE 364
E+ + SRE +G+G +G VY+G+ T VA+K + + F +E
Sbjct: 6 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 365 VEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-- 422
++ ++V L G + +G +++ +L+ G L +L + + P+
Sbjct: 64 ASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 423 ------RLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE 476
+++A A G+AYL+ +HRD+ A N ++ E F K+GDFG+ +
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR---- 171
Query: 477 GITHLTTRVAGTLG-----YVAPEYALYGKLTPGSDVYSFGVVLLEL 518
I G G +++PE G T SDV+SFGVVL E+
Sbjct: 172 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGD-ANFKHE 364
E+ + SRE +G+G +G VY+G+ T VA+K + + F +E
Sbjct: 15 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 365 VEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-- 422
++ ++V L G + +G +++ +L+ G L +L + + P+
Sbjct: 73 ASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 423 ------RLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPE 476
+++A A G+AYL+ +HRD+ A N ++ E F K+GDFG+ +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR---- 180
Query: 477 GITHLTTRVAGTLG-----YVAPEYALYGKLTPGSDVYSFGVVLLEL 518
I G G +++PE G T SDV+SFGVVL E+
Sbjct: 181 DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 28/208 (13%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKA---GDANFKHEVEIIASVKHVNLVALRG 381
+G G YG+V + +G ++AVK+ ++ ++ E+ ++ +KH N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 117
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGLA 435
T LE + L HL G+ + +KL+ + RGL
Sbjct: 118 VFTPATSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 168
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + + T T Y APE
Sbjct: 169 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPE 221
Query: 496 YAL-YGKLTPGSDVYSFGVVLLELLSGK 522
L + D++S G ++ ELL+G+
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 79 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 129
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 130 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 79 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 129
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 130 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 77 NPHVCRLLGICLTSTVQL-------IMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 127
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 128 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 76 NPHVCRLLGICLTSTVQL-------IMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 126
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 127 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 324 NIIGKGGYGNVYKGMLP-NGTEVAVK---RFKNCSKAGDANFKHEVEIIASVKHVNLVAL 379
+ +G G +G V G G +VAVK R K S + E++ + +H +++ L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
Y + P + +V + + G L+D++ +G +L R+ G+ Y H
Sbjct: 82 --YQVISTPSDI---FMVMEYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHR 134
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALY 499
+ ++HRD+K N+LLD AK+ DFGL+ +G G+ Y APE +
Sbjct: 135 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRXSCGSPNYAAPE-VIS 188
Query: 500 GKL--TPGSDVYSFGVVLLELLSG 521
G+L P D++S GV+L LL G
Sbjct: 189 GRLYAGPEVDIWSSGVILYALLCG 212
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 79 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 129
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 130 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 78 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 128
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 129 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 83 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 133
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 134 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 77 NPHVCRLLGICLTSTVQL-------IMQLMPFGXLLDYVREHKDNIGS-QYLLNWCVQI- 127
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 128 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 101 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 151
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 152 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 203
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 204 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 79 NPHVCRLLGICLTSTVQL-------IMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 129
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 130 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLR------IALGTARGL 434
T LE + L HL G+ + + +L + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 82 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 132
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 133 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 184
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 185 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 84
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 140
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 238
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 78 NPHVCRLLGICLTSTVQL-------IMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 128
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 129 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 80 NPHVCRLLGICLTSTVQL-------IMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 130
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 131 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 182
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 131/297 (44%), Gaps = 53/297 (17%)
Query: 326 IGKGGYGNVY--------KGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V K VAVK K+ + D ++ E+E++ + KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG---SGMK-----------KLSWP 421
++ L G T PL ++ + G+L ++L GM+ ++++
Sbjct: 103 IITLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ + I +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYY 213
Query: 482 TTRVAGTL--GYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSD 537
G L ++APE AL+ ++ T SDV+SFGV++ E+ + G I + +
Sbjct: 214 KKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF--- 269
Query: 538 WAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 270 ---KLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 92
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 93 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 144 KYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRA 195
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ + +H
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLAFRH 82
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 138
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 139 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 236
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLR------IALGTARGL 434
T LE + L HL G+ + + +L + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 36 IGEGAYGMVCSAYDNL--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 85
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 141
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 142 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 198
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 239
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 37 IGEGAYGMVCSAYDNL--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 86
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 87 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 142
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 143 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 199
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 200 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 240
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 28 IGEGAYGMVCSAYDNL--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 77
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 78 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 133
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 134 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 190
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 191 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 231
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 84
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 140
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 238
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKI--------SPFEHQTYXQRTLREIKILLRFRH 84
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 140
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 238
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 131/297 (44%), Gaps = 53/297 (17%)
Query: 326 IGKGGYGNVY--------KGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V K VAVK K+ + D ++ E+E++ + KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG---SGMK-----------KLSWP 421
++ L G T PL ++ + G+L ++L GM+ ++++
Sbjct: 103 IINLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ + I +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYY 213
Query: 482 TTRVAGTL--GYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSD 537
G L ++APE AL+ ++ T SDV+SFGV++ E+ + G I + +
Sbjct: 214 KNTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF--- 269
Query: 538 WAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 270 ---KLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 80
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 136
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 137 LKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 234
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 320 FSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFK---HEVEIIASVKHVN 375
FS IG G +G VY + N VA+K+ K + ++ EV + ++H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+ RG L H +V + GS D L K L + G +GLA
Sbjct: 77 TIQYRG-----CYLREHTAWLVMEYCL-GSASD-LLEVHKKPLQEVEIAAVTHGALQGLA 129
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
YLH +IHRD+KA NILL E K+GDFG A I GT ++APE
Sbjct: 130 YLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSA-----SIMAPANXFVGTPYWMAPE 181
Query: 496 YAL---YGKLTPGSDVYSFGVVLLELLSGK 522
L G+ DV+S G+ +EL K
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIELAERK 211
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 80
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 136
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 137 LKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 234
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 29 IGEGAYGMVCSAYDNL--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 78
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 134
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 135 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 232
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 94
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 95 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 146 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRA 197
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 92
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 93 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 144 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 195
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 86
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 87 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 137
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 138 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 189
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 92
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 93 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 144 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 195
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 29 IGEGAYGMVCSAYDNL--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 78
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 134
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 135 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 232
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 73 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 123
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 124 -----AEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 175
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 176 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 94
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 95 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 146 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 197
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 107/235 (45%), Gaps = 27/235 (11%)
Query: 326 IGKGGYGNVYKGML--PNG--TEVAVKRFK----NCSKAGDANFKHEVEIIASVKHVNLV 377
+G G +G V +G P+G VAVK K + +A D +F EV + S+ H NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 78
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L G T P++ +V +L GSL D L L + R A+ A G+ YL
Sbjct: 79 RLYGV-VLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYL 131
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPE 495
IHRD+ A N+LL K+GDFGL + P+ H + + APE
Sbjct: 132 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 496 YALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSDWAWELVKEGKTL 549
+ SD + FGV L E+ + G++ + G +L ++ KEG+ L
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH-----KIDKEGERL 238
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 94
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 95 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 146 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRA 197
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 98
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 99 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 150 KYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRA 201
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 80
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 136
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 137 LKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 234
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 80
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 136
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 137 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 234
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 43/261 (16%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGD-ANFKHE 364
E+ + SRE +G+G +G VY+G+ T VA+K + + F +E
Sbjct: 12 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 365 VEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-- 422
++ ++V L G V +G +++ +L+ G L +L + + P+
Sbjct: 70 ASVMKEFNCHHVVRLLG-----VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 423 ------RLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---- 472
+++A A G+AYL+ +HRD+ A N ++ E F K+GDFG+ +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 473 ---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQ 529
+ G L R +++PE G T SDV+SFGVVL E+ + A + Q
Sbjct: 182 TDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQ 233
Query: 530 GKSVLLSDWAWELVKEGKTLD 550
G L ++ V EG LD
Sbjct: 234 G---LSNEQVLRFVMEGGLLD 251
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 84
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KCQHLSNDHICYFLYQILRG 140
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 238
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 43/261 (16%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGD-ANFKHE 364
E+ + SRE +G+G +G VY+G+ T VA+K + + F +E
Sbjct: 21 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 365 VEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-- 422
++ ++V L G + +G +++ +L+ G L +L + + P+
Sbjct: 79 ASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 423 ------RLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---- 472
+++A A G+AYL+ +HRD+ A N ++ E F K+GDFG+ +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 473 ---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQ 529
+ G L R +++PE G T SDV+SFGVVL E+ + A + Q
Sbjct: 191 TDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQ 242
Query: 530 GKSVLLSDWAWELVKEGKTLD 550
G L ++ V EG LD
Sbjct: 243 G---LSNEQVLRFVMEGGLLD 260
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 320 FSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFK---HEVEIIASVKHVN 375
FS IG G +G VY + N VA+K+ K + ++ EV + ++H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+ RG L H +V + GS D L K L + G +GLA
Sbjct: 116 TIQYRG-----CYLREHTAWLVMEYCL-GSASD-LLEVHKKPLQEVEIAAVTHGALQGLA 168
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
YLH +IHRD+KA NILL E K+GDFG A I GT ++APE
Sbjct: 169 YLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSA-----SIMAPANXFVGTPYWMAPE 220
Query: 496 YAL---YGKLTPGSDVYSFGVVLLELLSGK 522
L G+ DV+S G+ +EL K
Sbjct: 221 VILAMDEGQYDGKVDVWSLGITCIELAERK 250
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 92/225 (40%), Gaps = 34/225 (15%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEV-AVKRFKNCSKAGDANFKHEVEIIAS 370
+IK +F ++GKG +G V+ + A+K K +V ++
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKK-----------DVVLMDD 60
Query: 371 VKHVNLVALRGYSTA-TVPLEGH---------QRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
+V R S A P H V + L+ G L H+ LS
Sbjct: 61 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS- 119
Query: 421 PIRLRIALGTAR---GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEG 477
R A GL +LH I++RD+K NILLD+ K+ DFG+ K N G
Sbjct: 120 ----RATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 172
Query: 478 ITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
T GT Y+APE L K D +SFGV+L E+L G+
Sbjct: 173 DAK-TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 94
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 95 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 146 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRA 197
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 89
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 90 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 141 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 192
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 131/297 (44%), Gaps = 53/297 (17%)
Query: 326 IGKGGYGNVY--------KGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V K VAVK K+ + D ++ E+E++ + KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG---SGMK-----------KLSWP 421
++ L G T PL ++ + G+L ++L GM+ ++++
Sbjct: 103 IINLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ + I +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYY 213
Query: 482 TTRVAGTL--GYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSD 537
G L ++APE AL+ ++ T SDV+SFGV++ E+ + G I + +
Sbjct: 214 KKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF--- 269
Query: 538 WAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 270 ---KLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ + +H
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLAFRH 82
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 138
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 139 LKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 236
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 89
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 90 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 141 KYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRA 192
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 30/209 (14%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + + T T Y AP
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGXVATRWYRAP 191
Query: 495 EYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
E L + D++S G ++ ELL+G+
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 43/261 (16%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGD-ANFKHE 364
E+ + SRE +G+G +G VY+G+ T VA+K + + F +E
Sbjct: 14 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 365 VEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-- 422
++ ++V L G + +G +++ +L+ G L +L + + P+
Sbjct: 72 ASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 423 ------RLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---- 472
+++A A G+AYL+ +HRD+ A N ++ E F K+GDFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 473 ---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQ 529
+ G L R +++PE G T SDV+SFGVVL E+ + A + Q
Sbjct: 184 TDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQ 235
Query: 530 GKSVLLSDWAWELVKEGKTLD 550
G L ++ V EG LD
Sbjct: 236 G---LSNEQVLRFVMEGGLLD 253
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 131/297 (44%), Gaps = 53/297 (17%)
Query: 326 IGKGGYGNVY--------KGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V K VAVK K+ + D ++ E+E++ + KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG---SGMK-----------KLSWP 421
++ L G T PL ++ + G+L ++L GM+ ++++
Sbjct: 103 IIHLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ + I +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYY 213
Query: 482 TTRVAGTL--GYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSD 537
G L ++APE AL+ ++ T SDV+SFGV++ E+ + G I + +
Sbjct: 214 KKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF--- 269
Query: 538 WAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 270 ---KLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 325 IIGKGGYGNVYKGMLPNGTEVAV-KRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
++GKG +G K EV V K + F EV+++ ++H N++ G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV- 75
Query: 384 TATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
L +R+ + + + G+L + S + W R+ A A G+AYLH
Sbjct: 76 -----LYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIASGMAYLH---S 126
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAKF------NPEGITHLTT-------RVAGTL 489
IIHRD+ + N L+ E V DFGLA+ PEG+ L V G
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 490 GYVAPEYALYGKLTPGSDVYSFGVVLLELL 519
++APE DV+SFG+VL E++
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 89
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 90 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 141 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 192
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 93
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 94 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 145 KYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRA 196
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDAN-----FKHEVEIIASVKHVNLVALR 380
IGKG +G V + ++ ++ N K + N FK E++I+ ++H LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK-ELQIMQGLEHPFLVNL- 80
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYG 440
YS + +V DLL G L HL + K + L + L Y
Sbjct: 81 WYSFQ----DEEDMFMVVDLLLGGDLRYHLQQNVHFKEE-----TVKLFICELVMALDYL 131
Query: 441 VQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYG 500
IIHRD+K NILLDE + DF +A P T +TT +AGT Y+APE
Sbjct: 132 QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-TQITT-MAGTKPYMAPEMFSSR 189
Query: 501 K---LTPGSDVYSFGVVLLELLSGKKACEI 527
K + D +S GV ELL G++ I
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRRPYHI 219
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 43/261 (16%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGD-ANFKHE 364
E+ + SRE +G+G +G VY+G+ T VA+K + + F +E
Sbjct: 21 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 365 VEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-- 422
++ ++V L G + +G +++ +L+ G L +L + P+
Sbjct: 79 ASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 423 ------RLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---- 472
+++A A G+AYL+ +HRD+ A N ++ E F K+GDFG+ +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 473 ---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQ 529
+ G L R +++PE G T SDV+SFGVVL E+ + A + Q
Sbjct: 191 TDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQ 242
Query: 530 GKSVLLSDWAWELVKEGKTLD 550
G L ++ V EG LD
Sbjct: 243 G---LSNEQVLRFVMEGGLLD 260
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 43/261 (16%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGD-ANFKHE 364
E+ + SRE +G+G +G VY+G+ T VA+K + + F +E
Sbjct: 43 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 365 VEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-- 422
++ ++V L G V +G +++ +L+ G L +L + + P+
Sbjct: 101 ASVMKEFNCHHVVRLLG-----VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 423 ------RLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---- 472
+++A A G+AYL+ +HRD+ A N ++ E F K+GDFG+ +
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 473 ---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQ 529
+ G L R +++PE G T SDV+SFGVVL E+ + A + Q
Sbjct: 213 TDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQ 264
Query: 530 GKSVLLSDWAWELVKEGKTLD 550
G L ++ V EG LD
Sbjct: 265 G---LSNEQVLRFVMEGGLLD 282
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 93
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 94 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 145 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 196
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 38/229 (16%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGD-ANFKHE 364
E+ + SRE +G+G +G VY+G+ T VA+K + + F +E
Sbjct: 14 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 365 VEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-- 422
++ ++V L G V +G +++ +L+ G L +L + + P+
Sbjct: 72 ASVMKEFNCHHVVRLLG-----VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 423 ------RLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---- 472
+++A A G+AYL+ +HRD+ A N ++ E F K+GDFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 473 ---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
+ G L R +++PE G T SDV+SFGVVL E+
Sbjct: 184 TDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 84
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 85 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 136 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 187
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 99
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 100 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 151 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 202
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 97
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 98 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 148
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 149 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 200
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 99
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 100 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 151 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 202
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 82
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 138
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 139 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 236
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 89
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 90 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 141 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 192
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 324 NIIGKGGYGNVYKGMLPNGTE-VAVKRF-KNCSKAGDANFKHEVEIIASVKHVNLVALRG 381
+++G G + V + VA+K K + + + ++E+ ++ +KH N+VAL
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
+ GH +I+ L+ G L+D + G RL + A + YLH
Sbjct: 84 IYESG----GHLYLIM-QLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLH--- 133
Query: 442 QPAIIHRDIKASNIL---LDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL 498
I+HRD+K N+L LDE + + DFGL+K G + + GT GYVAPE
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLA 191
Query: 499 YGKLTPGSDVYSFGVVLLELLSG 521
+ D +S GV+ LL G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 99
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 100 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 151 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 202
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 43/261 (16%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGDA-NFKHE 364
E+ + SRE +G+G +G VY+G+ T VA+K + + F +E
Sbjct: 15 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 365 VEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-- 422
++ ++V L G V +G +++ +L+ G L +L + + P+
Sbjct: 73 ASVMKEFNCHHVVRLLG-----VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 423 ------RLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---- 472
+++A A G+AYL+ +HRD+ A N ++ E F K+GDFG+ +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 473 ---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQ 529
+ G L R +++PE G T SDV+SFGVVL E+ + A + Q
Sbjct: 185 TDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQ 236
Query: 530 GKSVLLSDWAWELVKEGKTLD 550
G L ++ V EG LD
Sbjct: 237 G---LSNEQVLRFVMEGGLLD 254
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 84
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 85 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 136 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 187
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 324 NIIGKGGYGNVYKGMLPNGTE-VAVKRF-KNCSKAGDANFKHEVEIIASVKHVNLVALRG 381
+++G G + V + VA+K K + + + ++E+ ++ +KH N+VAL
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
+ GH +I+ L+ G L+D + G RL + A + YLH
Sbjct: 84 IYESG----GHLYLIM-QLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLH--- 133
Query: 442 QPAIIHRDIKASNIL---LDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL 498
I+HRD+K N+L LDE + + DFGL+K G + + GT GYVAPE
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLA 191
Query: 499 YGKLTPGSDVYSFGVVLLELLSG 521
+ D +S GV+ LL G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 324 NIIGKGGYGNVYKGMLPNGTE-VAVKRF-KNCSKAGDANFKHEVEIIASVKHVNLVALRG 381
+++G G + V + VA+K K + + + ++E+ ++ +KH N+VAL
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
+ GH +I+ L+ G L+D + G RL + A + YLH
Sbjct: 84 IYESG----GHLYLIM-QLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLH--- 133
Query: 442 QPAIIHRDIKASNIL---LDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL 498
I+HRD+K N+L LDE + + DFGL+K G + + GT GYVAPE
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLA 191
Query: 499 YGKLTPGSDVYSFGVVLLELLSG 521
+ D +S GV+ LL G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 15/214 (7%)
Query: 315 AATMNFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFK-HEVEIIASVK 372
+++ F + +G G Y VYKG+ G VA+K K S+ G + E+ ++ +K
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 373 HVNLVALRGYSTATVPLEGHQRIIVCDLLHNG---SLYDHLFGSGMKKLSWPIRLRIALG 429
H N+V L V ++ +V + + N + G+ + L +
Sbjct: 62 HENIVRL-----YDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTL 489
+GLA+ H + I+HRD+K N+L+++ + K+GDFGLA+ + ++ V TL
Sbjct: 117 LLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TL 172
Query: 490 GYVAPEYALYGKLTPGS-DVYSFGVVLLELLSGK 522
Y AP+ + + S D++S G +L E+++GK
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 98
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 99 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 150 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 201
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 83
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 84 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 135 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 186
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 37/225 (16%)
Query: 321 SRENI-----IGKGGYGNVYKGMLPN------GTEVAVKRF-KNCSKAGDANFKHEVEII 368
SRE I +G+G +G VY+G + T VAVK ++ S F +E ++
Sbjct: 15 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 369 ASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIR----- 423
++V L G + +G ++V +L+ +G L +L + + P R
Sbjct: 75 KGFTCHHVVRLLGVVS-----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 424 ---LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+++A A G+AYL+ +HRD+ A N ++ F K+GDFG+ + I
Sbjct: 130 QEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXE 182
Query: 481 LTTRVAGTLG-----YVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
G G ++APE G T SD++SFGVVL E+ S
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 38/229 (16%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGDA-NFKHE 364
E+ + SRE +G+G +G VY+G+ T VA+K + + F +E
Sbjct: 8 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 365 VEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-- 422
++ ++V L G V +G +++ +L+ G L +L + + P+
Sbjct: 66 ASVMKEFNCHHVVRLLG-----VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 423 ------RLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---- 472
+++A A G+AYL+ +HRD+ A N ++ E F K+GDFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 177
Query: 473 ---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
+ G L R +++PE G T SDV+SFGVVL E+
Sbjct: 178 TDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 43/261 (16%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGD-ANFKHE 364
E+ + SRE +G+G +G VY+G+ T VA+K + + F +E
Sbjct: 11 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 365 VEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-- 422
++ ++V L G V +G +++ +L+ G L +L + P+
Sbjct: 69 ASVMKEFNCHHVVRLLG-----VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 423 ------RLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---- 472
+++A A G+AYL+ +HRD+ A N ++ E F K+GDFG+ +
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 473 ---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQ 529
+ G L R +++PE G T SDV+SFGVVL E+ + A + Q
Sbjct: 181 TDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQ 232
Query: 530 GKSVLLSDWAWELVKEGKTLD 550
G L ++ V EG LD
Sbjct: 233 G---LSNEQVLRFVMEGGLLD 250
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 28/208 (13%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKA---GDANFKHEVEIIASVKHVNLVALRG 381
+G G YG+V G VAVK+ ++ ++ E+ ++ +KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGLA 435
T LE + L HL G+ + +KL+ + RGL
Sbjct: 95 VFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + + T T Y APE
Sbjct: 146 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPE 198
Query: 496 YAL-YGKLTPGSDVYSFGVVLLELLSGK 522
L + D++S G ++ ELL+G+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 37/225 (16%)
Query: 321 SRENI-----IGKGGYGNVYKGMLPN------GTEVAVKRF-KNCSKAGDANFKHEVEII 368
SRE I +G+G +G VY+G + T VAVK ++ S F +E ++
Sbjct: 12 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 71
Query: 369 ASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIR----- 423
++V L G + +G ++V +L+ +G L +L + + P R
Sbjct: 72 KGFTCHHVVRLLGVVS-----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 126
Query: 424 ---LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+++A A G+AYL+ +HRD+ A N ++ F K+GDFG+ + I
Sbjct: 127 QEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXE 179
Query: 481 LTTRVAGTLG-----YVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
G G ++APE G T SD++SFGVVL E+ S
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 28/208 (13%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKA---GDANFKHEVEIIASVKHVNLVALRG 381
+G G YG+V G VAVK+ ++ ++ E+ ++ +KH N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGLA 435
T LE + L HL G+ + +KL+ + RGL
Sbjct: 95 VFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + + T T Y APE
Sbjct: 146 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPE 198
Query: 496 YAL-YGKLTPGSDVYSFGVVLLELLSGK 522
L + D++S G ++ ELL+G+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 83
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLR------IALGTARGL 434
T LE + L HL G+ + + +L + RGL
Sbjct: 84 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGL 134
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 135 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 186
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG---TLGY 491
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ H +AG T Y
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWY 188
Query: 492 VAPEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
APE L + D++S G ++ ELL+G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 107/235 (45%), Gaps = 27/235 (11%)
Query: 326 IGKGGYGNVYKGML--PNG--TEVAVKRFK----NCSKAGDANFKHEVEIIASVKHVNLV 377
+G G +G V +G P+G VAVK K + +A D +F EV + S+ H NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 74
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L G T P++ +V +L GSL D L L + R A+ A G+ YL
Sbjct: 75 RLYGV-VLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYL 127
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPE 495
IHRD+ A N+LL K+GDFGL + P+ H + + APE
Sbjct: 128 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 496 YALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSDWAWELVKEGKTL 549
+ SD + FGV L E+ + G++ + G +L ++ KEG+ L
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH-----KIDKEGERL 234
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 131/297 (44%), Gaps = 53/297 (17%)
Query: 326 IGKGGYGNVY--------KGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V K VAVK K+ + D ++ E+E++ + KH N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG---SGMK-----------KLSWP 421
++ L G T PL ++ + G+L ++L GM+ ++++
Sbjct: 90 IINLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ + I +
Sbjct: 145 DLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLAR-DINNIDYY 200
Query: 482 TTRVAGTL--GYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSD 537
G L ++APE AL+ ++ T SDV+SFGV++ E+ + G I + +
Sbjct: 201 KKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF--- 256
Query: 538 WAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 257 ---KLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 301
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 83
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 84 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 135 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 186
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 37/225 (16%)
Query: 321 SRENI-----IGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGDA-NFKHEVEII 368
SRE I +G+G +G VY+G + T VAVK + + F +E ++
Sbjct: 15 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 369 ASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIR----- 423
++V L G + +G ++V +L+ +G L +L + + P R
Sbjct: 75 KGFTCHHVVRLLGVVS-----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 424 ---LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH 480
+++A A G+AYL+ +HRD+ A N ++ F K+GDFG+ + I
Sbjct: 130 QEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXE 182
Query: 481 LTTRVAGTLG-----YVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
G G ++APE G T SD++SFGVVL E+ S
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 85
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 86 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 136
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 137 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 188
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG---TLGY 491
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ H +AG T Y
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWY 188
Query: 492 VAPEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
APE L + D++S G ++ ELL+G+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 107/235 (45%), Gaps = 27/235 (11%)
Query: 326 IGKGGYGNVYKGML--PNG--TEVAVKRFK----NCSKAGDANFKHEVEIIASVKHVNLV 377
+G G +G V +G P+G VAVK K + +A D +F EV + S+ H NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 74
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L G T P++ +V +L GSL D L L + R A+ A G+ YL
Sbjct: 75 RLYGV-VLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYL 127
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPE 495
IHRD+ A N+LL K+GDFGL + P+ H + + APE
Sbjct: 128 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 496 YALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSDWAWELVKEGKTL 549
+ SD + FGV L E+ + G++ + G +L ++ KEG+ L
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH-----KIDKEGERL 234
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 39 IGEGAYGMVCSAYDNV--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 88
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 89 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 144
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 145 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 201
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 202 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 242
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 80
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 136
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 137 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 234
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+++ + F+H E++I+ +H
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIRKI--------SPFEHQTYCQRTLREIKILLRFRH 84
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 140
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 238
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 325 IIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANF----KHEVEIIASVKHVNLVAL 379
I+G GG V+ L +VAVK + A D +F + E + A++ H +VA+
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLR-ADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
A P G IV + + +L D + G I + A L++
Sbjct: 78 YATGEAETPA-GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-----IADACQALNF 131
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVA--GTLGYVAPEYA 497
Q IIHRD+K +NI++ KV DFG+A+ + +T A GT Y++PE A
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 498 LYGKLTPGSDVYSFGVVLLELLSGK 522
+ SDVYS G VL E+L+G+
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 26/209 (12%)
Query: 325 IIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
++GKG YG VY G L N +A+K E+ + +KH N+V G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW-PIR---LRIALGTAR---GLAY 436
+ ++ I + + GSL S + + W P++ I T + GL Y
Sbjct: 89 SENGFIK-----IFMEQVPGGSL------SALLRSKWGPLKDNEQTIGFYTKQILEGLKY 137
Query: 437 LHYGVQPAIIHRDIKASNILLDE-AFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
LH I+HRDIK N+L++ + K+ DFG +K GI T GTL Y+APE
Sbjct: 138 LH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSK-RLAGINPCTETFTGTLQYMAPE 193
Query: 496 YALYGKLTPG--SDVYSFGVVLLELLSGK 522
G G +D++S G ++E+ +GK
Sbjct: 194 IIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 107/235 (45%), Gaps = 27/235 (11%)
Query: 326 IGKGGYGNVYKGML--PNG--TEVAVKRFK----NCSKAGDANFKHEVEIIASVKHVNLV 377
+G G +G V +G P+G VAVK K + +A D +F EV + S+ H NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 74
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L G T P++ +V +L GSL D L L + R A+ A G+ YL
Sbjct: 75 RLYGV-VLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYL 127
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPE 495
IHRD+ A N+LL K+GDFGL + P+ H + + APE
Sbjct: 128 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 496 YALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSDWAWELVKEGKTL 549
+ SD + FGV L E+ + G++ + G +L ++ KEG+ L
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH-----KIDKEGERL 234
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 110
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 111 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 162 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 213
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 107
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 108 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 159 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 210
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 107/235 (45%), Gaps = 27/235 (11%)
Query: 326 IGKGGYGNVYKGML--PNG--TEVAVKRFK----NCSKAGDANFKHEVEIIASVKHVNLV 377
+G G +G V +G P+G VAVK K + +A D +F EV + S+ H NL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 84
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L G T P++ +V +L GSL D L L + R A+ A G+ YL
Sbjct: 85 RLYGV-VLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYL 137
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPE 495
IHRD+ A N+LL K+GDFGL + P+ H + + APE
Sbjct: 138 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 496 YALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSDWAWELVKEGKTL 549
+ SD + FGV L E+ + G++ + G +L ++ KEG+ L
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH-----KIDKEGERL 244
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 107/235 (45%), Gaps = 27/235 (11%)
Query: 326 IGKGGYGNVYKGML--PNG--TEVAVKRFK----NCSKAGDANFKHEVEIIASVKHVNLV 377
+G G +G V +G P+G VAVK K + +A D +F EV + S+ H NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 78
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L G T P++ +V +L GSL D L L + R A+ A G+ YL
Sbjct: 79 RLYGV-VLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYL 131
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPE 495
IHRD+ A N+LL K+GDFGL + P+ H + + APE
Sbjct: 132 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 496 YALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSDWAWELVKEGKTL 549
+ SD + FGV L E+ + G++ + G +L ++ KEG+ L
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH-----KIDKEGERL 238
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 107/235 (45%), Gaps = 27/235 (11%)
Query: 326 IGKGGYGNVYKGML--PNG--TEVAVKRFK----NCSKAGDANFKHEVEIIASVKHVNLV 377
+G G +G V +G P+G VAVK K + +A D +F EV + S+ H NL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMD-DFIREVNAMHSLDHRNLI 84
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYL 437
L G T P++ +V +L GSL D L L + R A+ A G+ YL
Sbjct: 85 RLYGV-VLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYL 137
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPE 495
IHRD+ A N+LL K+GDFGL + P+ H + + APE
Sbjct: 138 E---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 496 YALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSDWAWELVKEGKTL 549
+ SD + FGV L E+ + G++ + G +L ++ KEG+ L
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH-----KIDKEGERL 244
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 100
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 156
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T T Y
Sbjct: 157 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 213
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 254
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 106
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 107 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 158 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 209
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYALYG-KLTPGSDVYSFGVVLLELLSGK 522
PE L D++S G ++ ELL+G+
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 119/256 (46%), Gaps = 36/256 (14%)
Query: 279 KKSEERVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGM 338
K++ R+++ + EP L + N A +I F + ++G G +G VYKG+
Sbjct: 15 KRTLRRLLQERELVEP-LTPSGEAPNQALLRI----LKETEFKKIKVLGSGAFGTVYKGL 69
Query: 339 -LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVKHVNLVALRGYS-TATVPLEG 391
+P G +V A+ + S + E ++ASV + ++ L G T+TV L
Sbjct: 70 WIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-- 127
Query: 392 HQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAI 445
+ L+ G L D++ GS L+W +++ A+G+ YL +
Sbjct: 128 -----ITQLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI------AKGMNYLE---DRRL 172
Query: 446 IHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGKLTP 504
+HRD+ A N+L+ K+ DFGLAK E + + ++A E L+ T
Sbjct: 173 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH 232
Query: 505 GSDVYSFGVVLLELLS 520
SDV+S+GV + EL++
Sbjct: 233 QSDVWSYGVTVWELMT 248
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 83
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 84 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG---TLGY 491
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ H +AG T Y
Sbjct: 135 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWY 184
Query: 492 VAPEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
APE L + D++S G ++ ELL+G+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 131/297 (44%), Gaps = 53/297 (17%)
Query: 326 IGKGGYGNVY--------KGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V K VAVK K+ + D ++ E+E++ + KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG---SGMK-----------KLSWP 421
++ L G T PL ++ + G+L ++L GM+ ++++
Sbjct: 103 IINLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ ARG+ YL IHRD+ A N+L+ E ++ DFGLA+ + I +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLAR-DINNIDYY 213
Query: 482 TTRVAGTL--GYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSD 537
G L ++APE AL+ ++ T SDV+SFGV++ E+ + G I + +
Sbjct: 214 KKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF--- 269
Query: 538 WAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 270 ---KLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 107
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 108 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 159 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 210
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 131/297 (44%), Gaps = 53/297 (17%)
Query: 326 IGKGGYGNVY--------KGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V K VAVK K+ + D ++ E+E++ + KH N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG---SGMK-----------KLSWP 421
++ L G T PL ++ + G+L ++L GM+ ++++
Sbjct: 92 IINLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ + I +
Sbjct: 147 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYY 202
Query: 482 TTRVAGTL--GYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSD 537
G L ++APE AL+ ++ T SDV+SFGV++ E+ + G I + +
Sbjct: 203 KKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF--- 258
Query: 538 WAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 259 ---KLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 303
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 325 IIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANF----KHEVEIIASVKHVNLVAL 379
I+G GG V+ L +VAVK + A D +F + E + A++ H +VA+
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLR-ADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
A P G IV + + +L D + G I + A L++
Sbjct: 78 YDTGEAETPA-GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-----IADACQALNF 131
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVA--GTLGYVAPEYA 497
Q IIHRD+K +NI++ KV DFG+A+ + +T A GT Y++PE A
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 498 LYGKLTPGSDVYSFGVVLLELLSGK 522
+ SDVYS G VL E+L+G+
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 106
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 107 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + +T ++ TR Y A
Sbjct: 158 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRA 209
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 351 KNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHL 410
K + + + ++E+ ++ +KH N+VAL + G ++ L+ G L+D +
Sbjct: 53 KKALEGKEGSMENEIAVLHKIKHPNIVALDDIYES-----GGHLYLIMQLVSGGELFDRI 107
Query: 411 FGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNIL---LDEAFEAKVGD 467
G RL + A + YLH I+HRD+K N+L LDE + + D
Sbjct: 108 VEKGFYTERDASRLIFQVLDA--VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISD 162
Query: 468 FGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
FGL+K G + + GT GYVAPE + D +S GV+ LL G
Sbjct: 163 FGLSKMEDPG--SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 26/209 (12%)
Query: 325 IIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
++GKG YG VY G L N +A+K E+ + +KH N+V G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW-PIR---LRIALGTAR---GLAY 436
+ ++ I + + GSL S + + W P++ I T + GL Y
Sbjct: 75 SENGFIK-----IFMEQVPGGSL------SALLRSKWGPLKDNEQTIGFYTKQILEGLKY 123
Query: 437 LHYGVQPAIIHRDIKASNILLDE-AFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
LH I+HRDIK N+L++ + K+ DFG +K GI T GTL Y+APE
Sbjct: 124 LH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSK-RLAGINPCTETFTGTLQYMAPE 179
Query: 496 YALYGKLTPG--SDVYSFGVVLLELLSGK 522
G G +D++S G ++E+ +GK
Sbjct: 180 IIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 131/297 (44%), Gaps = 53/297 (17%)
Query: 326 IGKGGYGNVY--------KGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V K VAVK K+ + D ++ E+E++ + KH N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG---SGMK-----------KLSWP 421
++ L G T PL ++ + G+L ++L GM+ ++++
Sbjct: 95 IINLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ + I +
Sbjct: 150 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYY 205
Query: 482 TTRVAGTL--GYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSD 537
G L ++APE AL+ ++ T SDV+SFGV++ E+ + G I + +
Sbjct: 206 KKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF--- 261
Query: 538 WAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 262 ---KLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 306
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ D+GLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 92/225 (40%), Gaps = 34/225 (15%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEV-AVKRFKNCSKAGDANFKHEVEIIAS 370
+IK +F ++GKG +G V+ + A+K K +V ++
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKK-----------DVVLMDD 59
Query: 371 VKHVNLVALRGYSTA-TVPLEGH---------QRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
+V R S A P H V + L+ G L H+ LS
Sbjct: 60 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS- 118
Query: 421 PIRLRIALGTAR---GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEG 477
R A GL +LH I++RD+K NILLD+ K+ DFG+ K N G
Sbjct: 119 ----RATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171
Query: 478 ITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
T GT Y+APE L K D +SFGV+L E+L G+
Sbjct: 172 DAK-TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 53/297 (17%)
Query: 326 IGKGGYGNVY--------KGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V K VAVK K+ + D ++ E+E++ + KH N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG---SGMK-----------KLSWP 421
++ L G T PL ++ + G+L ++L GM+ ++++
Sbjct: 149 IINLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ + I +
Sbjct: 204 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYY 259
Query: 482 TTRVAGTL--GYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSD 537
G L ++APE AL+ ++ T SDV+SFGV++ E+ + G I + +
Sbjct: 260 KKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL---- 314
Query: 538 WAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
++L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 315 --FKLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 97/230 (42%), Gaps = 47/230 (20%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 100
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLR------IA 427
N++ + A + + + L HL G+ + KL L
Sbjct: 101 ENIIGINDIIRAPT----------IEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFL 150
Query: 428 LGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRV 485
RGL Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T
Sbjct: 151 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 486 AGTLGYVAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
T Y APE L K T D++S G +L E+LS + I GK L
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 254
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 80 NPHVCRLLGICLTSTVQL-------IMQLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 130
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFG AK E +
Sbjct: 131 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 182
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 31/222 (13%)
Query: 319 NFSRENI-----IGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVK 372
+F+ E++ IG+G YG+V K + P+G +AVKR ++ + K + +++ +
Sbjct: 18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRST-----VDEKEQKQLLMDLD 72
Query: 373 HVNLVALRGYSTATV-----PLEGHQRIIVCDLLHNGSL---YDHLFGSGMKKLSWPIRL 424
V +R + L +C L + S Y +++ + I
Sbjct: 73 ----VVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG 128
Query: 425 RIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR 484
+I L T + L +L ++ IIHRDIK SNILLD + K+ DFG++ + I TR
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK--TR 184
Query: 485 VAGTLGYVAPEYALYGKLTPG----SDVYSFGVVLLELLSGK 522
AG Y+APE G SDV+S G+ L EL +G+
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLR------IALGTARGL 434
T LE + L HL G+ + + +L + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGL + + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++ G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 76 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGSQYL-LNWCVQI- 126
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 127 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 78 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 128
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFG AK E +
Sbjct: 129 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 76 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 126
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFG AK E +
Sbjct: 127 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 178
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 130/297 (43%), Gaps = 53/297 (17%)
Query: 326 IGKGGYGNVY--------KGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V K VAVK K+ + D ++ E+E++ + KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG---SGMK-----------KLSWP 421
++ L G T PL ++ G+L ++L GM+ ++++
Sbjct: 103 IINLLGACTQDGPL-----YVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ + I +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYY 213
Query: 482 TTRVAGTL--GYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSD 537
G L ++APE AL+ ++ T SDV+SFGV++ E+ + G I + +
Sbjct: 214 KKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF--- 269
Query: 538 WAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 270 ---KLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 130/297 (43%), Gaps = 53/297 (17%)
Query: 326 IGKGGYGNVY--------KGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASV-KHVN 375
+G+G +G V K VAVK K+ + D ++ E+E++ + KH N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG---SGMK-----------KLSWP 421
++ L G T PL ++ G+L ++L GM+ ++++
Sbjct: 103 IINLLGACTQDGPL-----YVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHL 481
+ ARG+ YL IHRD+ A N+L+ E K+ DFGLA+ + I +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYY 213
Query: 482 TTRVAGTL--GYVAPEYALYGKL-TPGSDVYSFGVVLLELLS-GKKACEIIQGKSVLLSD 537
G L ++APE AL+ ++ T SDV+SFGV++ E+ + G I + +
Sbjct: 214 KKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF--- 269
Query: 538 WAWELVKEGKTLDVIXXXXXXXXXXXXXXQYVLTAAICAHPILQARPTMDQIVKILE 594
+L+KEG +D + + C H + RPT Q+V+ L+
Sbjct: 270 ---KLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 78 NPHVCRLLGICLTSTVQL-------IMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 128
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFG AK E +
Sbjct: 129 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 29/237 (12%)
Query: 294 PSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPN--GTE--VAVKR 349
PS + S+NL R K+ +F+ ++GKG +G V ML + GTE A+K
Sbjct: 2 PSEDRKQPSNNLDRVKL-------TDFNFLMVLGKGSFGKV---MLADRKGTEELYAIKI 51
Query: 350 FKNCSKAGDANFK---HEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL 406
K D + + E ++A + + TV + V + ++ G L
Sbjct: 52 LKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTV----DRLYFVMEYVNGGDL 107
Query: 407 YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVG 466
H+ G K P + A + GL +LH + II+RD+K N++LD K+
Sbjct: 108 MYHIQQVG--KFKEPQAVFYAAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIA 162
Query: 467 DFGLAKFN-PEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
DFG+ K + +G+T T GT Y+APE Y D +++GV+L E+L+G+
Sbjct: 163 DFGMCKEHMMDGVT--TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++ G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 83 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 133
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 134 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 83 NPHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 133
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFG AK E +
Sbjct: 134 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 185
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 38/229 (16%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGD-ANFKHE 364
E+ + SRE +G+G +G VY+G+ T VA+K + + F +E
Sbjct: 8 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 365 VEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-- 422
++ ++V L G V +G +++ +L+ G L +L + + P+
Sbjct: 66 ASVMKEFNCHHVVRLLG-----VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 423 ------RLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---- 472
+++A A G+AYL+ +HRD+ A N + E F K+GDFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 473 ---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
+ G L R +++PE G T SDV+SFGVVL E+
Sbjct: 178 TDYYRKGGKGLLPVR------WMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 325 IIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANF----KHEVEIIASVKHVNLVAL 379
I+G GG V+ L +VAVK + A D +F + E + A++ H +VA+
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVLR-ADLARDPSFYLRFRREAQNAAALNHPAIVAV 94
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
A P G IV + + +L D + G I + A L++
Sbjct: 95 YDTGEAETP-AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV-----IADACQALNF 148
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVA--GTLGYVAPEYA 497
Q IIHRD+K +NI++ KV DFG+A+ + +T A GT Y++PE A
Sbjct: 149 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 208
Query: 498 LYGKLTPGSDVYSFGVVLLELLSGK 522
+ SDVYS G VL E+L+G+
Sbjct: 209 RGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++ G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 83 NPHVCRLLGICLTSTVQL-------IMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 133
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFGLAK E +
Sbjct: 134 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 41/227 (18%)
Query: 321 SRENI-----IGKGGYGNVYKGMLPN------GTEVAVKRF-KNCSKAGDANFKHEVEII 368
SRE I +G+G +G VY+G + T VAVK ++ S F +E ++
Sbjct: 15 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 369 ASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIR----- 423
++V L G + +G ++V +L+ +G L +L + + P R
Sbjct: 75 KGFTCHHVVRLLGVVS-----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 424 ---LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-------F 473
+++A A G+AYL+ +HRD+ A N ++ F K+GDFG+ + +
Sbjct: 130 QEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYY 186
Query: 474 NPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
G L R ++APE G T SD++SFGVVL E+ S
Sbjct: 187 RKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 84
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 140
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T Y
Sbjct: 141 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 197
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 238
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNCSKAGDANFKH---------EVEIIASVKH 373
IG+G YG V Y + N VA+K+ + F+H E++I+ +H
Sbjct: 36 IGEGAYGMVCSAYDNL--NKVRVAIKKI--------SPFEHQTYCQRTLREIKILLRFRH 85
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ + A + IV DL+ LY L + LS RG
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL---KTQHLSNDHICYFLYQILRG 141
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLGY 491
L Y+H ++HRD+K SN+LL+ + K+ DFGLA+ H T Y
Sbjct: 142 LKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 198
Query: 492 VAPEYALYGK-LTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
APE L K T D++S G +L E+LS + I GK L
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYL 239
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 320 FSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVAL 379
F++ + IGKG +G VYKG+ + EV + + +A D + EI + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
R + + L+ + I+ + L GS D L +++ LR L +GL YLH
Sbjct: 81 RYFGSY---LKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREIL---KGLDYLHS 134
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTTRVAGTLGYVAPEYAL 498
+ IHRDIKA+N+LL E + K+ DFG+A + I GT ++APE
Sbjct: 135 ERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPEVIK 189
Query: 499 YGKLTPGSDVYSFGVVLLELLSGK 522
+D++S G+ +EL G+
Sbjct: 190 QSAYDFKADIWSLGITAIELAKGE 213
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEV----AVKRFKNC-SKAGDANFKHEVEIIASVK 372
F + ++G G +G VYKG+ +P G +V A+K + S + E ++ASV
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 373 HVNLVALRGYS-TATVPLEGHQRIIVCDLLHNGSLYDHL------FGSGMKKLSWPIRLR 425
+ ++ L G T+TV L + L+ G L D++ GS L+W +++
Sbjct: 78 NPHVCRLLGICLTSTVQL-------IMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQI- 128
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTR 484
A+G+ YL ++HRD+ A N+L+ K+ DFG AK E +
Sbjct: 129 -----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++A E L+ T SDV+S+GV + EL++
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 25/209 (11%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASVKHVNLVALRG 381
+GKG +GNVY + + FK KAG + + EVEI + ++H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL---GTARGLAYLH 438
Y + ++ + G++Y L +KLS R A A L+Y H
Sbjct: 80 YFHDATRV-----YLILEYAPLGTVYREL-----QKLSRFDEQRTATYITELANALSYCH 129
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL 498
+IHRDIK N+LL E K+ DFG + P + T + GTL Y+ PE +
Sbjct: 130 ---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPE-MI 182
Query: 499 YGKLTPGS-DVYSFGVVLLELLSGKKACE 526
G++ D++S GV+ E L G E
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 41/227 (18%)
Query: 321 SRENI-----IGKGGYGNVYKGMLPN------GTEVAVKRF-KNCSKAGDANFKHEVEII 368
SRE I +G+G +G VY+G + T VAVK ++ S F +E ++
Sbjct: 15 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 369 ASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIR----- 423
++V L G + +G ++V +L+ +G L +L + + P R
Sbjct: 75 KGFTCHHVVRLLGVVS-----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 424 ---LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-------F 473
+++A A G+AYL+ +HRD+ A N ++ F K+GDFG+ + +
Sbjct: 130 QEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 186
Query: 474 NPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
G L R ++APE G T SD++SFGVVL E+ S
Sbjct: 187 RKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 110
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 111 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF-NPEGITHLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + E ++ TR Y A
Sbjct: 162 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYRA 213
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 361 FKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
F+ EV + + H N+V++ V E +V + + +L +++ G
Sbjct: 58 FEREVHNSSQLSHQNIVSM-----IDVDEEDDCYYLVMEYIEGPTLSEYIESHG------ 106
Query: 421 PIRLRIALG-TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT 479
P+ + A+ T + L + + I+HRDIK NIL+D K+ DFG+AK E
Sbjct: 107 PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166
Query: 480 HLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
T V GT+ Y +PE A +D+YS G+VL E+L G+
Sbjct: 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 41/227 (18%)
Query: 321 SRENI-----IGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGDA-NFKHEVEII 368
SRE I +G+G +G VY+G + T VAVK + + F +E ++
Sbjct: 14 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 73
Query: 369 ASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIR----- 423
++V L G + +G ++V +L+ +G L +L + + P R
Sbjct: 74 KGFTCHHVVRLLGVVS-----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 128
Query: 424 ---LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-------F 473
+++A A G+AYL+ +HRD+ A N ++ F K+GDFG+ + +
Sbjct: 129 QEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 185
Query: 474 NPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
G L R ++APE G T SD++SFGVVL E+ S
Sbjct: 186 RKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 320 FSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVAL 379
F++ IGKG +G V+KG+ +V + + +A D + EI + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
+ Y + L+ + I+ + L GS D L + + LR L +GL YLH
Sbjct: 89 KYYGSY---LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHS 142
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALY 499
+ IHRDIKA+N+LL E E K+ DFG+A + T V GT ++APE
Sbjct: 143 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQ 198
Query: 500 GKLTPGSDVYSFGVVLLELLSGK 522
+D++S G+ +EL G+
Sbjct: 199 SAYDSKADIWSLGITAIELARGE 221
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 320 FSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVAL 379
F++ IGKG +G V+KG+ +V + + +A D + EI + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
+ Y + L+ + I+ + L GS D L + + LR L +GL YLH
Sbjct: 69 KYYGSY---LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHS 122
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALY 499
+ IHRDIKA+N+LL E E K+ DFG+A + T V GT ++APE
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQ 178
Query: 500 GKLTPGSDVYSFGVVLLELLSGK 522
+D++S G+ +EL G+
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 23/209 (11%)
Query: 320 FSRENIIGKGGYGNVYKGMLPNGTEV--AVKRFKNCSKAGDANFKHEVEIIASVKHVNLV 377
++ EN IG+G +G V K + GT + A K+ FK E+EI+ S+ H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 378 ALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY 436
L Y T E + I +V +L G L++ + + + S RI +AY
Sbjct: 87 RL--YET----FEDNTDIYLVMELCTGGELFERVVHKRVFRES--DAARIMKDVLSAVAY 138
Query: 437 LHYGVQPAIIHRDIKASNIL-LDEAFEA--KVGDFGL-AKFNPEGITHLTTRVAGTLGYV 492
H + + HRD+K N L L ++ ++ K+ DFGL A+F P + + T+V GT YV
Sbjct: 139 CH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKV-GTPYYV 192
Query: 493 APEYALYGKLTPGSDVYSFGVVLLELLSG 521
+P+ L G P D +S GV++ LL G
Sbjct: 193 SPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 23/209 (11%)
Query: 320 FSRENIIGKGGYGNVYKGMLPNGTEV--AVKRFKNCSKAGDANFKHEVEIIASVKHVNLV 377
++ EN IG+G +G V K + GT + A K+ FK E+EI+ S+ H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 378 ALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY 436
L Y T E + I +V +L G L++ + + + S RI +AY
Sbjct: 70 RL--YET----FEDNTDIYLVMELCTGGELFERVVHKRVFRES--DAARIMKDVLSAVAY 121
Query: 437 LHYGVQPAIIHRDIKASNIL-LDEAFEA--KVGDFGL-AKFNPEGITHLTTRVAGTLGYV 492
H + + HRD+K N L L ++ ++ K+ DFGL A+F P + + T+V GT YV
Sbjct: 122 CH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKV-GTPYYV 175
Query: 493 APEYALYGKLTPGSDVYSFGVVLLELLSG 521
+P+ L G P D +S GV++ LL G
Sbjct: 176 SPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFK--HEVEIIASVKHVN 375
N+ + IGKG + V + G EVAVK + K EV I+ + H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSG-MKKLSWPIRLRIALGTARGL 434
+V L L +V + G ++D+L G MK+ + R + +
Sbjct: 76 IVKLFEVIETEKTL-----YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-- 128
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
Y H Q I+HRD+KA N+LLD K+ DFG + N + + G+ Y AP
Sbjct: 129 -YCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFS--NEFTVGNKLDTFCGSPPYAAP 182
Query: 495 EYALYGKLT-PGSDVYSFGVVLLELLSG 521
E K P DV+S GV+L L+SG
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 30/209 (14%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 107
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 108 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
Y+H IIHRD+K SN+ ++E E K+ DFGLA+ + + T Y AP
Sbjct: 159 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----XGXVATRWYRAP 211
Query: 495 EYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
E L + D++S G ++ ELL+G+
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 20/241 (8%)
Query: 293 EPSLVLESRSSNLARFKIEEIKAATMN-FSRENIIGKGGYGNVYKGMLPNGTEV----AV 347
+PS ++ +S+ L + TM + R +GKGG+ Y+ + EV V
Sbjct: 16 KPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV 75
Query: 348 KRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSL 406
+ E+ I S+ + ++V G+ E + +V ++ SL
Sbjct: 76 PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF------FEDDDFVYVVLEICRRRSL 129
Query: 407 YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVG 466
+ K ++ P T +G+ YLH +IHRD+K N+ L++ + K+G
Sbjct: 130 LE--LHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIG 184
Query: 467 DFGLA-KFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKAC 525
DFGLA K +G T + GT Y+APE + D++S G +L LL GK
Sbjct: 185 DFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 526 E 526
E
Sbjct: 243 E 243
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 23/212 (10%)
Query: 320 FSRENIIGKGGYGNVYKGMLPNGTEV----AVKRFKNC---SKAGD-ANFKHEVEIIASV 371
F ++GKGGYG V++ G A+K K A D A+ K E I+ V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSG--MKKLSWPIRLRIALG 429
KH +V L Y+ T G + ++ + L G L+ L G M+ + I++
Sbjct: 79 KHPFIVDLI-YAFQT----GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTL 489
L +LH Q II+RD+K NI+L+ K+ DFGL K + T +T GT+
Sbjct: 134 ----LGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTI 185
Query: 490 GYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
Y+APE + D +S G ++ ++L+G
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 23/212 (10%)
Query: 320 FSRENIIGKGGYGNVYKGMLPNGTEV----AVKRFKNC---SKAGD-ANFKHEVEIIASV 371
F ++GKGGYG V++ G A+K K A D A+ K E I+ V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSG--MKKLSWPIRLRIALG 429
KH +V L Y+ T G + ++ + L G L+ L G M+ + I++
Sbjct: 79 KHPFIVDLI-YAFQT----GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTL 489
L +LH Q II+RD+K NI+L+ K+ DFGL K + T +T GT+
Sbjct: 134 ----LGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTI 185
Query: 490 GYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
Y+APE + D +S G ++ ++L+G
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 34/216 (15%)
Query: 320 FSRENIIGKGGYGNVY--KGMLPNGTEVAVK---RFKNCSKAGDANFKHEVEIIASVKHV 374
+ + ++GKG +G V K + G E AVK + + K + EV+++ + H
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 375 NLVAL------RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL 428
N++ L +GY +V ++ G L+D + K+ S RI
Sbjct: 87 NIMKLYEFFEDKGYF-----------YLVGEVYTGGELFDEIISR--KRFSEVDAARIIR 133
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPEGITHLTTRV 485
G+ Y+H + I+HRD+K N+LL+ + ++ DFGL+ + E + ++
Sbjct: 134 QVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKMKDKI 189
Query: 486 AGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
GT Y+APE L+G DV+S GV+L LLSG
Sbjct: 190 -GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ FGLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 22/236 (9%)
Query: 298 LESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLP--NGT--EVAVKRFK-- 351
L R S + K+E++ I+G+G +G+V +G L +GT +VAVK K
Sbjct: 14 LVPRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLD 73
Query: 352 NCSKAGDANFKHEVEIIASVKHVNLVALRG----YSTATVPLEGHQRIIVCDLLHNGSLY 407
N S+ F E + H N++ L G S+ +P + +++ + G L+
Sbjct: 74 NSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIP----KPMVILPFMKYGDLH 129
Query: 408 DHLFGS----GMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEA 463
+L S G K + L+ + A G+ YL +HRD+ A N +L +
Sbjct: 130 TYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTV 186
Query: 464 KVGDFGLAKFNPEGITHLTTRVAGT-LGYVAPEYALYGKLTPGSDVYSFGVVLLEL 518
V DFGL+K G + R+A + ++A E T SDV++FGV + E+
Sbjct: 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ D GLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 24/243 (9%)
Query: 293 EPSLVLESRSSNLARFKIEEIKAATMN-FSRENIIGKGGYGNVYKGMLPNGTEV----AV 347
+PS ++ +S+ L + TM + R +GKGG+ Y+ + EV V
Sbjct: 16 KPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV 75
Query: 348 KRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSL 406
+ E+ I S+ + ++V G+ E + +V ++ SL
Sbjct: 76 PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF------FEDDDFVYVVLEICRRRSL 129
Query: 407 YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVG 466
+ K ++ P T +G+ YLH +IHRD+K N+ L++ + K+G
Sbjct: 130 LE--LHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIG 184
Query: 467 DFGLA---KFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKK 523
DFGLA +F+ E L GT Y+APE + D++S G +L LL GK
Sbjct: 185 DFGLATKIEFDGERKKDL----CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 524 ACE 526
E
Sbjct: 241 PFE 243
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ D GLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
+G G YG+V Y L +VAVK+ F++ A E+ ++ +KH N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHA--RRTYRELRLLKHLKHENVIG 91
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
L T +E + + L L + + + + RGL Y+H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF---LVYQLLRGLKYIH 148
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVAPEYA 497
IIHRD+K SN+ ++E E ++ DFGLA+ E +T ++ TR Y APE
Sbjct: 149 SA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIM 200
Query: 498 L-YGKLTPGSDVYSFGVVLLELLSGK 522
L + D++S G ++ ELL GK
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDA-NFKHEVEIIASVKHVNLVALRGYST 384
+G G +G V++ + V V +F N D K+E+ I+ + H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 385 ATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPA 444
+ ++ +++ + L G L+D + K +S + GL ++H + +
Sbjct: 119 -----DKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMH---EHS 169
Query: 445 IIHRDIKASNILLD--EAFEAKVGDFGLA-KFNPEGITHLTTRVAGTLGYVAPEYALYGK 501
I+H DIK NI+ + +A K+ DFGLA K NP+ I +TT T + APE
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREP 226
Query: 502 LTPGSDVYSFGVVLLELLSG 521
+ +D+++ GV+ LLSG
Sbjct: 227 VGFYTDMWAIGVLGYVLLSG 246
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT--YRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ DF LA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 34/216 (15%)
Query: 320 FSRENIIGKGGYGNVY--KGMLPNGTEVAVK---RFKNCSKAGDANFKHEVEIIASVKHV 374
+ + ++GKG +G V K + G E AVK + + K + EV+++ + H
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 375 NLVAL------RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL 428
N++ L +GY +V ++ G L+D + K+ S RI
Sbjct: 93 NIMKLYEFFEDKGYF-----------YLVGEVYTGGELFDEIISR--KRFSEVDAARIIR 139
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPEGITHLTTRV 485
G+ Y+H + I+HRD+K N+LL+ + ++ DFGL+ + E + ++
Sbjct: 140 QVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKMKDKI 195
Query: 486 AGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
GT Y+APE L+G DV+S GV+L LLSG
Sbjct: 196 -GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 24/243 (9%)
Query: 293 EPSLVLESRSSNLARFKIEEIKAATMN-FSRENIIGKGGYGNVYKGMLPNGTEV----AV 347
+PS ++ +S+ L + TM + R +GKGG+ Y+ + EV V
Sbjct: 16 KPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV 75
Query: 348 KRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSL 406
+ E+ I S+ + ++V G+ E + +V ++ SL
Sbjct: 76 PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF------FEDDDFVYVVLEICRRRSL 129
Query: 407 YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVG 466
+ K ++ P T +G+ YLH +IHRD+K N+ L++ + K+G
Sbjct: 130 LE--LHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIG 184
Query: 467 DFGLA---KFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKK 523
DFGLA +F+ E L GT Y+APE + D++S G +L LL GK
Sbjct: 185 DFGLATKIEFDGERKKXL----CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 524 ACE 526
E
Sbjct: 241 PFE 243
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 324 NIIGKGGYGNVYKGMLP-NGTEVAVK---RFKNCSKAGDANFKHEVEIIASVKHVNLVAL 379
+ +G G +G V G G +VAVK R K S K E++ + +H +++ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
Y + P + +V + + G L+D++ G + RL + +A + H
Sbjct: 77 --YQVISTPTD---FFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH- 130
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALY 499
++HRD+K N+LLD AK+ DFGL+ +G T+ G+ Y APE +
Sbjct: 131 ----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPE-VIS 183
Query: 500 GKL--TPGSDVYSFGVVLLELLSG 521
G+L P D++S GV+L LL G
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 12/204 (5%)
Query: 320 FSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVAL 379
F++ IGKG +G V+KG+ +V + + +A D + EI + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
+ Y + L+ + I+ + L GS D L + + LR L +GL YLH
Sbjct: 84 KYYGSY---LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHS 137
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTTRVAGTLGYVAPEYAL 498
+ IHRDIKA+N+LL E E K+ DFG+A + I GT ++APE
Sbjct: 138 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPEVIK 192
Query: 499 YGKLTPGSDVYSFGVVLLELLSGK 522
+D++S G+ +EL G+
Sbjct: 193 QSAYDSKADIWSLGITAIELARGE 216
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFK---HEVEIIASVKHV 374
N+ IGKG + V + G EVAV R + ++ ++ + EV I+ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAV-RIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSG-MKKLSWPIRLRIALGTARG 433
N+V L L +V + G ++D+L G MK+ + R + +
Sbjct: 74 NIVKLFEVIETEKTL-----YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ- 127
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVA 493
Y H Q I+HRD+KA N+LLD K+ DFG + N + G+ Y A
Sbjct: 128 --YCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDEFCGSPPYAA 180
Query: 494 PEYALYGKLT-PGSDVYSFGVVLLELLSG 521
PE K P DV+S GV+L L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 12/204 (5%)
Query: 320 FSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVAL 379
F++ IGKG +G V+KG+ +V + + +A D + EI + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
+ Y + L+ + I+ + L GS D L + + LR L +GL YLH
Sbjct: 69 KYYGSY---LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHS 122
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTTRVAGTLGYVAPEYAL 498
+ IHRDIKA+N+LL E E K+ DFG+A + I GT ++APE
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPEVIK 177
Query: 499 YGKLTPGSDVYSFGVVLLELLSGK 522
+D++S G+ +EL G+
Sbjct: 178 QSAYDSKADIWSLGITAIELARGE 201
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V G VAVK+ F++ A E+ ++ +KH N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHMKHENVIGLL 87
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTARGL 434
T LE + L HL G+ + +KL+ + RGL
Sbjct: 88 DVFTPARSLEEFNDVY---------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVA 493
Y+H IIHRD+K SN+ ++E E K+ D GLA+ + +T ++ TR Y A
Sbjct: 139 KYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYRA 190
Query: 494 PEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
PE L + D++S G ++ ELL+G+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
V + ++ G L H+ G + P + A A GL +L II+RD+K N+
Sbjct: 98 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNV 152
Query: 456 LLDEAFEAKVGDFGLAKFN-PEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVV 514
+LD K+ DFG+ K N +G+T T GT Y+APE Y D ++FGV+
Sbjct: 153 MLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 210
Query: 515 LLELLSGKKACE 526
L E+L+G+ E
Sbjct: 211 LYEMLAGQAPFE 222
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKRFKNC--SKAGDANFKHEVEIIASVKHVNLVALR 380
+G G YG+V Y L +VAVK+ S E+ ++ +KH N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYG 440
T +E + + L L + + + LS + RGL Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIV---KCQALSDEHVQFLVYQLLRGLKYIHSA 142
Query: 441 VQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVAPEYAL- 498
IIHRD+K SN+ ++E E ++ DFGLA+ E +T ++ TR Y APE L
Sbjct: 143 ---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLN 194
Query: 499 YGKLTPGSDVYSFGVVLLELLSGK 522
+ D++S G ++ ELL GK
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFK--HEVEIIASVKHVN 375
N+ IGKG + V + G EVAVK + K EV I+ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSG-MKKLSWPIRLRIALGTARGL 434
+V L L +V + G ++D+L G MK+ + R + +
Sbjct: 75 IVKLFEVIETEKTL-----YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-- 127
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
Y H Q I+HRD+KA N+LLD K+ DFG + N + G+ Y AP
Sbjct: 128 -YCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDTFCGSPPYAAP 181
Query: 495 EYALYGKLT-PGSDVYSFGVVLLELLSG 521
E K P DV+S GV+L L+SG
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFK--HEVEIIASVKHVN 375
N+ IGKG + V + G EVAVK + K EV I+ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSG-MKKLSWPIRLRIALGTARGL 434
+V L L +V + G ++D+L G MK+ + R + +
Sbjct: 75 IVKLFEVIETEKTL-----YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-- 127
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
Y H Q I+HRD+KA N+LLD K+ DFG + N + G+ Y AP
Sbjct: 128 -YCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDTFCGSPPYAAP 181
Query: 495 EYALYGKLT-PGSDVYSFGVVLLELLSG 521
E K P DV+S GV+L L+SG
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFK--HEVEIIASVKHVN 375
N+ IGKG + V + G EVAVK + K EV I+ + H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSG-MKKLSWPIRLRIALGTARGL 434
+V L L +V + G ++D+L G MK+ + R + +
Sbjct: 68 IVKLFEVIETEKTL-----YLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ-- 120
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
Y H Q I+HRD+KA N+LLD K+ DFG + N + G+ Y AP
Sbjct: 121 -YCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDTFCGSPPYAAP 174
Query: 495 EYALYGKLT-PGSDVYSFGVVLLELLSG 521
E K P DV+S GV+L L+SG
Sbjct: 175 ELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
V + ++ G L H+ G + P + A A GL +L II+RD+K N+
Sbjct: 419 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNV 473
Query: 456 LLDEAFEAKVGDFGLAKFN-PEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVV 514
+LD K+ DFG+ K N +G+T T GT Y+APE Y D ++FGV+
Sbjct: 474 MLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 531
Query: 515 LLELLSGKKACE 526
L E+L+G+ E
Sbjct: 532 LYEMLAGQAPFE 543
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 324 NIIGKGGYGNVYKGMLP-NGTEVAVK---RFKNCSKAGDANFKHEVEIIASVKHVNLVAL 379
+ +G G +G V G G +VAVK R K S K E++ + +H +++ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
Y + P + +V + + G L+D++ G + RL + +A + H
Sbjct: 77 --YQVISTPTD---FFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH- 130
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALY 499
++HRD+K N+LLD AK+ DFGL+ +G G+ Y APE +
Sbjct: 131 ----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRDSCGSPNYAAPE-VIS 183
Query: 500 GKL--TPGSDVYSFGVVLLELLSG 521
G+L P D++S GV+L LL G
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKR--FK-NCSKAG-DANFKHEVEIIASVKHVNLVALRG 381
+GKG +GNVY + + FK KAG + + EVEI + ++H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL---GTARGLAYLH 438
Y + ++ + G++Y L +KLS R A A L+Y H
Sbjct: 80 YFHDATRV-----YLILEYAPLGTVYREL-----QKLSRFDEQRTATYITELANALSYCH 129
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL 498
+IHRDIK N+LL E K+ DFG + P + + GTL Y+ PE +
Sbjct: 130 ---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP---SSRRDTLCGTLDYLPPE-MI 182
Query: 499 YGKLTPGS-DVYSFGVVLLELLSGKKACE 526
G++ D++S GV+ E L G E
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 41/227 (18%)
Query: 321 SRENI-----IGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGDA-NFKHEVEII 368
SRE I +G+G +G VY+G + T VAVK + + F +E ++
Sbjct: 15 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 369 ASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIR----- 423
++V L G + +G ++V +L+ +G L +L + + P R
Sbjct: 75 KGFTCHHVVRLLGVVS-----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 424 ---LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-------F 473
+++A A G+AYL+ +HR++ A N ++ F K+GDFG+ + +
Sbjct: 130 QEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 186
Query: 474 NPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
G L R ++APE G T SD++SFGVVL E+ S
Sbjct: 187 RKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 41/227 (18%)
Query: 321 SRENI-----IGKGGYGNVYKGMLPN------GTEVAVKRFKNCSKAGDA-NFKHEVEII 368
SRE I +G+G +G VY+G + T VAVK + + F +E ++
Sbjct: 16 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 75
Query: 369 ASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIR----- 423
++V L G + +G ++V +L+ +G L +L + + P R
Sbjct: 76 KGFTCHHVVRLLGVVS-----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 130
Query: 424 ---LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-------F 473
+++A A G+AYL+ +HR++ A N ++ F K+GDFG+ + +
Sbjct: 131 QEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 187
Query: 474 NPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
G L R ++APE G T SD++SFGVVL E+ S
Sbjct: 188 RKGGKGLLPVR------WMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 34/216 (15%)
Query: 320 FSRENIIGKGGYGNVY--KGMLPNGTEVAVK---RFKNCSKAGDANFKHEVEIIASVKHV 374
+ + ++GKG +G V K + G E AVK + + K + EV+++ + H
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 375 NLVAL------RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL 428
N++ L +GY +V ++ G L+D + K+ S RI
Sbjct: 110 NIMKLYEFFEDKGYF-----------YLVGEVYTGGELFDEIISR--KRFSEVDAARIIR 156
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPEGITHLTTRV 485
G+ Y+H + I+HRD+K N+LL+ + ++ DFGL+ + E + ++
Sbjct: 157 QVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKMKDKI 212
Query: 486 AGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
GT Y+APE L+G DV+S GV+L LLSG
Sbjct: 213 -GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 34/227 (14%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLV 377
+F ++G+G +G V K + A+K+ ++ + + EV ++AS+ H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVMLLASLNHQYVV 65
Query: 378 AL-------RGYSTATVPLEGHQRIIV-CDLLHNGSLYDHLFGSGMKKLS---WPIRLRI 426
R + ++ + + + NG+LYD + + + W R+
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RL 121
Query: 427 ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF------------- 473
L+Y+H IIHRD+K NI +DE+ K+GDFGLAK
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 474 NPEGITHLTTRVAGTLGYVAPEYAL-YGKLTPGSDVYSFGVVLLELL 519
N G + T GT YVA E G D+YS G++ E++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRF--KNCSKAGDANFKHEVEI--IASVKHVNLVALRG 381
+G+G +G V + +F + K D + + E EI + ++H +++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL-- 74
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
Y T P + I++ G L+D++ K+++ R + Y H
Sbjct: 75 YDVITTPTD----IVMVIEYAGGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCH--- 125
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGK 501
+ I+HRD+K N+LLD+ K+ DFGL+ +G + G+ Y APE + GK
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG--NFLKTSCGSPNYAAPE-VINGK 182
Query: 502 L--TPGSDVYSFGVVLLELLSGK 522
L P DV+S G+VL +L G+
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFK---HEVEIIASVKHV 374
N+ IGKG + V + G EVAV R + ++ ++ + EV I+ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAV-RIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSG-MKKLSWPIRLRIALGTARG 433
N+V L L +V + G ++D+L G MK+ + R + +
Sbjct: 74 NIVKLFEVIETEKTL-----YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ- 127
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVA 493
Y H Q I+HRD+KA N+LLD K+ DFG + N + G+ Y A
Sbjct: 128 --YCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDTFCGSPPYAA 180
Query: 494 PEYALYGKLT-PGSDVYSFGVVLLELLSG 521
PE K P DV+S GV+L L+SG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
+G G YG+V Y L +VAVK+ F++ A E+ ++ +KH N++
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHA--RRTYRELRLLKHLKHENVIG 91
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLH 438
L T +E + + L L + + + LS + RGL Y+H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIV---KCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT-HLTTRVAGTLGYVAPEYA 497
IIHRD+K SN+ ++E E ++ DFGLA+ E +T ++ TR Y APE
Sbjct: 149 SA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIM 200
Query: 498 L-YGKLTPGSDVYSFGVVLLELLSGK 522
L + D++S G ++ ELL GK
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASN 454
I +C +G D + K++ I ++++ RGLAYL Q I+HRD+K SN
Sbjct: 89 ISICMEHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSN 145
Query: 455 ILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVV 514
IL++ E K+ DFG++ + I + GT Y+APE + SD++S G+
Sbjct: 146 ILVNSRGEIKLCDFGVSG---QLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLS 202
Query: 515 LLELLSGK--------KACEIIQGKSVL 534
L+EL G+ K E I G+ V+
Sbjct: 203 LVELAVGRYPIPPPDAKELEAIFGRPVV 230
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 34/216 (15%)
Query: 320 FSRENIIGKGGYGNVY--KGMLPNGTEVAVK---RFKNCSKAGDANFKHEVEIIASVKHV 374
+ + ++GKG +G V K + G E AVK + + K + EV+++ + H
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 375 NLVAL------RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL 428
N++ L +GY +V ++ G L+D + K+ S RI
Sbjct: 111 NIMKLYEFFEDKGYF-----------YLVGEVYTGGELFDEIISR--KRFSEVDAARIIR 157
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPEGITHLTTRV 485
G+ Y+H + I+HRD+K N+LL+ + ++ DFGL+ + E + ++
Sbjct: 158 QVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKMKDKI 213
Query: 486 AGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
GT Y+APE L+G DV+S GV+L LLSG
Sbjct: 214 -GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 117/249 (46%), Gaps = 34/249 (13%)
Query: 286 VKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEV 345
VK+ D+P+ V++ +S+ + EI ++ +IG G +G V++ L EV
Sbjct: 13 VKLNPLDDPNKVIKVLASDGKTGEQREIA-----YTNCKVIGNGSFGVVFQAKLVESDEV 67
Query: 346 AVKRFKNCSKAGDANFKH-EVEIIASVKHVNLVALRG--YSTATVPLEGHQRII---VCD 399
A+K+ D FK+ E++I+ VKH N+V L+ YS E ++ V +
Sbjct: 68 AIKKV-----LQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE 122
Query: 400 LLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDE 459
++ S + M L + + L R LAY+H I HRDIK N+LLD
Sbjct: 123 TVYRASRHYAKLKQTMPMLLIKLYMYQLL---RSLAYIH---SIGICHRDIKPQNLLLDP 176
Query: 460 AFEA-KVGDFGLAKFNPEG---ITHLTTRVAGTLGYVAPEYALYG--KLTPGSDVYSFGV 513
K+ DFG AK G ++ + +R Y APE ++G T D++S G
Sbjct: 177 PSGVLKLIDFGSAKILIAGEPNVSXICSRY-----YRAPEL-IFGATNYTTNIDIWSTGC 230
Query: 514 VLLELLSGK 522
V+ EL+ G+
Sbjct: 231 VMAELMQGQ 239
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFK--HEVEIIASVKHVN 375
N+ IGKG + V + G EVAVK + K EV I+ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSG-MKKLSWPIRLRIALGTARGL 434
+V L L +V + G ++D+L G MK+ + R + +
Sbjct: 75 IVKLFEVIETEKTL-----YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-- 127
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
Y H Q I+HRD+KA N+LLD K+ DFG + N + G Y AP
Sbjct: 128 -YCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDAFCGAPPYAAP 181
Query: 495 EYALYGKLT-PGSDVYSFGVVLLELLSG 521
E K P DV+S GV+L L+SG
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 46/233 (19%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLV 377
+F ++G+G +G V K + A+K+ ++ + + EV ++AS+ H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVMLLASLNHQYVV 65
Query: 378 -----------------ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
A++ ST + +E + + DL+H+ +L + + W
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENL------NQQRDEYW 119
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-------- 472
R+ L+Y+H IIHRD+K NI +DE+ K+GDFGLAK
Sbjct: 120 ----RLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 473 -----FNPEGITHLTTRVAGTLGYVAPEYAL-YGKLTPGSDVYSFGVVLLELL 519
N G + T GT YVA E G D+YS G++ E++
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 30/223 (13%)
Query: 320 FSRENI-----IGKGGYGNVYK------GMLPNGTEVAVKRFKNCSKAGDAN-FKHEVEI 367
F R N+ +G G +G V + G +VAVK K+ + A + E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 368 IASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLS----WPI 422
++ + +H N+V L G T P+ +++ + G L + L L P+
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPV-----LVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 157
Query: 423 RLRIAL----GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGI 478
LR L A+G+A+L IHRD+ A N+LL AK+GDFGLA+
Sbjct: 158 ELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 214
Query: 479 THLTTRVAG-TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
++ A + ++APE T SDV+S+G++L E+ S
Sbjct: 215 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 26/219 (11%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFK--NCSKAGDANFK---HEV 365
++K+ + + + +G+G + VYK N + VA+K+ K + S+A D + E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 366 EIIASVKHVNLVALR---GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI 422
+++ + H N++ L G+ + + + ++ + SL L S +K
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLV--LTPSHIKA----- 116
Query: 423 RLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHL 481
L T +GL YLH Q I+HRD+K +N+LLDE K+ DFGLAK F +
Sbjct: 117 ---YMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYX 170
Query: 482 TTRVAGTLGYVAPEYALYGKL-TPGSDVYSFGVVLLELL 519
V T Y APE ++ G D+++ G +L ELL
Sbjct: 171 HQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 30/223 (13%)
Query: 320 FSRENI-----IGKGGYGNVYK------GMLPNGTEVAVKRFKNCSKAGDAN-FKHEVEI 367
F R N+ +G G +G V + G +VAVK K+ + A + E++I
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 368 IASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLS----WPI 422
++ + +H N+V L G T P+ +++ + G L + L L P+
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPV-----LVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 149
Query: 423 RLRIAL----GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGI 478
LR L A+G+A+L IHRD+ A N+LL AK+GDFGLA+
Sbjct: 150 ELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 206
Query: 479 THLTTRVAG-TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
++ A + ++APE T SDV+S+G++L E+ S
Sbjct: 207 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYST 384
+G+G YG+VYK + G VA+K+ S + E+ I+ ++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE--IIKEISIMQQCDSPHVVKYYGSYF 94
Query: 385 ATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPA 444
L IV + GS+ D + K L+ I T +GL YLH+ +
Sbjct: 95 KNTDL-----WIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK-- 146
Query: 445 IIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTP 504
IHRDIKA NILL+ AK+ DFG+A + + V GT ++APE
Sbjct: 147 -IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEIGYNC 204
Query: 505 GSDVYSFGVVLLELLSGK 522
+D++S G+ +E+ GK
Sbjct: 205 VADIWSLGITAIEMAEGK 222
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L D + S + + P+ +GLA
Sbjct: 64 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 118 FCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 326 IGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYST 384
IG+G G V + G +VAVK+ + +EV I+ H N+V + YS+
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDM--YSS 110
Query: 385 ATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPA 444
V G + +V + L G+L D + + M + + L R L+YLH
Sbjct: 111 YLV---GDELWVVMEFLEGGALTDIVTHTRMNEEQIAT---VCLSVLRALSYLH---NQG 161
Query: 445 IIHRDIKASNILLDEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEYALYGKLT 503
+IHRDIK+ +ILL K+ DFG A+ + E + GT ++APE + +L
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKXLVGTPYWMAPE--VISRLP 217
Query: 504 PGS--DVYSFGVVLLELLSGK 522
G+ D++S G++++E++ G+
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGE 238
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKR---FKNCSKAGDANFKHEVEIIASVKHV 374
NF E IG+G + VY+ L +G VA+K+ F A+ E++++ + H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIR--LRIALGTAR 432
N++ + Y++ +E ++ IV +L G L + +K P R + +
Sbjct: 93 NVI--KYYASF---IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYV 492
L ++H ++HRDIK +N+ + K+GD GL +F T + V GT Y+
Sbjct: 148 ALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYM 203
Query: 493 APEYALYGKLTPGSDVYSFGVVLLEL 518
+PE SD++S G +L E+
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFK-NCSKAG-DANFKHEVEIIASVKHVNLVAL---- 379
+G+G YG VYK G VA+KR + + G + E+ ++ + H N+V+L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
T+ E ++ + L N + G++ I L L RG+A+ H
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDENKT--------GLQDSQIKIYLYQLL---RGVAHCH- 136
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL- 498
Q I+HRD+K N+L++ K+ DFGLA+ + T V TL Y AP+ +
Sbjct: 137 --QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMG 193
Query: 499 YGKLTPGSDVYSFGVVLLELLSGK 522
K + D++S G + E+++GK
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 64 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + T V TL Y APE
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 173
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 174 ILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFK-NCSKAG-DANFKHEVEIIASVKHVNLVAL---- 379
+G+G YG VYK G VA+KR + + G + E+ ++ + H N+V+L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
T+ E ++ + L N + G++ I L L RG+A+ H
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDENKT--------GLQDSQIKIYLYQLL---RGVAHCH- 136
Query: 440 GVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALY 499
Q I+HRD+K N+L++ K+ DFGLA+ + T V TL Y AP+ +
Sbjct: 137 --QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMG 193
Query: 500 GKLTPGS-DVYSFGVVLLELLSGK 522
K S D++S G + E+++GK
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 320 FSRENIIGKGGYGN-VYKGMLPNGTEVAVKRFK--NCSKAGDANFKHEVEIIASVKHVNL 376
+ R IG+G +G + +G + +K S + EV ++A++KH N+
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85
Query: 377 VALRGYSTATVPLEGHQRIIVCDLLHNGSLYDH-------LFGSGMKKLSWPIRLRIALG 429
V R E IV D G L+ LF + L W +++ +AL
Sbjct: 86 VQYRESFE-----ENGSLYIVMDYCEGGDLFKRINAQKGVLFQED-QILDWFVQICLAL- 138
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTL 489
++H I+HRDIK+ NI L + ++GDFG+A+ L GT
Sbjct: 139 -----KHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARV-LNSTVELARACIGTP 189
Query: 490 GYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKSVLL 535
Y++PE SD+++ G VL EL + K A E K+++L
Sbjct: 190 YYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVL 235
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 321 SRENIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVAL 379
S+ I+G G +G V+K G ++A K K K+E+ ++ + H NL+ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHY 439
+ + ++V + + G L+D + L+ + G+ ++H
Sbjct: 152 YDAFESKNDI-----VLVMEYVDGGELFDRIIDESYN-LTELDTILFMKQICEGIRHMH- 204
Query: 440 GVQPAIIHRDIKASNILL--DEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEY 496
Q I+H D+K NIL +A + K+ DFGLA+ + P + GT ++APE
Sbjct: 205 --QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTPEFLAPEV 259
Query: 497 ALYGKLTPGSDVYSFGVVLLELLSG 521
Y ++ +D++S GV+ LLSG
Sbjct: 260 VNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 64 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + T V TL Y APE
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 173
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 63 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + T V TL Y APE
Sbjct: 117 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 172
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 71 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + T V TL Y APE
Sbjct: 125 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 180
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 63 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + T V TL Y APE
Sbjct: 117 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 172
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 65 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + T V TL Y APE
Sbjct: 119 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 174
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 64 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + T V TL Y APE
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 173
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 24/237 (10%)
Query: 299 ESRSSNLARFKIEEIKAATMN-FSRENIIGKGGYGNVYKGMLPNGTEV----AVKRFKNC 353
+ +S+ L + TM + R +GKGG+ Y+ + EV V +
Sbjct: 6 DPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL 65
Query: 354 SKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFG 412
E+ I S+ + ++V G+ E + +V ++ SL +
Sbjct: 66 KPHQKEKMSTEIAIHKSLDNPHVVGFHGF------FEDDDFVYVVLEICRRRSLLE--LH 117
Query: 413 SGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLA- 471
K ++ P T +G+ YLH +IHRD+K N+ L++ + K+GDFGLA
Sbjct: 118 KRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLAT 174
Query: 472 --KFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACE 526
+F+ E L GT Y+APE + D++S G +L LL GK E
Sbjct: 175 KIEFDGERKKDL----CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 68 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + T V TL Y APE
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 177
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 21/224 (9%)
Query: 304 NLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR--FKN-CSKAG-DA 359
N A ++ + K +F +GKG +GNVY + + FK+ K G +
Sbjct: 1 NTALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH 60
Query: 360 NFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKL 418
+ E+EI + ++H N++ + Y +RI ++ + G LY L G
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNY------FHDRKRIYLMLEFAPRGELYKELQKHGRFDE 114
Query: 419 SWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGI 478
L A LHY + +IHRDIK N+L+ E K+ DFG + P
Sbjct: 115 QRSATFMEELADA-----LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-- 167
Query: 479 THLTTR-VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
L R + GTL Y+ PE D++ GV+ E L G
Sbjct: 168 --LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 71 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + T V TL Y APE
Sbjct: 125 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 180
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 34/227 (14%)
Query: 320 FSRENI-----IGKGGYGNVYK------GMLPNGTEVAVKRFKNCSKAGDAN-FKHEVEI 367
F R N+ +G G +G V + G +VAVK K+ + A + E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 368 IASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHL------------FGSG 414
++ + +H N+V L G T P+ +++ + G L + L F
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPV-----LVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 415 MKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFN 474
LS L + A+G+A+L IHRD+ A N+LL AK+GDFGLA+
Sbjct: 158 NSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 214
Query: 475 PEGITHLTTRVAG-TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
++ A + ++APE T SDV+S+G++L E+ S
Sbjct: 215 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFK--HEVEIIASVKHVN 375
N+ IGKG + V + G EVA+K + K EV I+ + H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSG-MKKLSWPIRLRIALGTARGL 434
+V L L ++ + G ++D+L G MK+ + R + +
Sbjct: 73 IVKLFEVIETEKTL-----YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ-- 125
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
Y H Q I+HRD+KA N+LLD K+ DFG + N + G+ Y AP
Sbjct: 126 -YCH---QKRIVHRDLKAENLLLDADMNIKIADFGFS--NEFTVGGKLDTFCGSPPYAAP 179
Query: 495 EYALYGKLT-PGSDVYSFGVVLLELLSG 521
E K P DV+S GV+L L+SG
Sbjct: 180 ELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 97/223 (43%), Gaps = 40/223 (17%)
Query: 317 TMN-FSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHV 374
TMN FS IIG+GG+G VY + G A+K C K + E +A + +
Sbjct: 186 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK----CLDKKRIKMK-QGETLALNERI 240
Query: 375 NLVALRGYSTATVPLEGHQRIIVC---------------DLLHNGSLYDHLFGSGMKKLS 419
L + ST P IVC DL++ G L+ HL G+ S
Sbjct: 241 MLSLV---STGDCPF------IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FS 289
Query: 420 WPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT 479
A GL ++H +++RD+K +NILLDE ++ D GLA +
Sbjct: 290 EADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 346
Query: 480 HLTTRVAGTLGYVAPEYALYG-KLTPGSDVYSFGVVLLELLSG 521
H + GT GY+APE G +D +S G +L +LL G
Sbjct: 347 HASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 97/223 (43%), Gaps = 40/223 (17%)
Query: 317 TMN-FSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHV 374
TMN FS IIG+GG+G VY + G A+K C K + E +A + +
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK----CLDKKRIKMK-QGETLALNERI 241
Query: 375 NLVALRGYSTATVPLEGHQRIIVC---------------DLLHNGSLYDHLFGSGMKKLS 419
L + ST P IVC DL++ G L+ HL G+ S
Sbjct: 242 MLSLV---STGDCPF------IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FS 290
Query: 420 WPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT 479
A GL ++H +++RD+K +NILLDE ++ D GLA +
Sbjct: 291 EADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 347
Query: 480 HLTTRVAGTLGYVAPEYALYG-KLTPGSDVYSFGVVLLELLSG 521
H + GT GY+APE G +D +S G +L +LL G
Sbjct: 348 HASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKR--FKN-CSKAG-DANFKHEVEIIASVKHVNLVALRG 381
+GKG +GNVY + + FK+ K G + + E+EI + ++H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 382 YSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYG 440
Y +RI ++ + G LY L G L A LHY
Sbjct: 82 Y------FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA-----LHYC 130
Query: 441 VQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR-VAGTLGYVAPEYALY 499
+ +IHRDIK N+L+ E K+ DFG + P L R + GTL Y+ PE
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEMIEG 186
Query: 500 GKLTPGSDVYSFGVVLLELLSG 521
D++ GV+ E L G
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 97/223 (43%), Gaps = 40/223 (17%)
Query: 317 TMN-FSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHV 374
TMN FS IIG+GG+G VY + G A+K C K + E +A + +
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK----CLDKKRIKMK-QGETLALNERI 241
Query: 375 NLVALRGYSTATVPLEGHQRIIVC---------------DLLHNGSLYDHLFGSGMKKLS 419
L + ST P IVC DL++ G L+ HL G+ S
Sbjct: 242 MLSLV---STGDCPF------IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FS 290
Query: 420 WPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT 479
A GL ++H +++RD+K +NILLDE ++ D GLA +
Sbjct: 291 EADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 347
Query: 480 HLTTRVAGTLGYVAPEYALYG-KLTPGSDVYSFGVVLLELLSG 521
H + GT GY+APE G +D +S G +L +LL G
Sbjct: 348 HASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 97/223 (43%), Gaps = 40/223 (17%)
Query: 317 TMN-FSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHV 374
TMN FS IIG+GG+G VY + G A+K C K + E +A + +
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK----CLDKKRIKMK-QGETLALNERI 241
Query: 375 NLVALRGYSTATVPLEGHQRIIVC---------------DLLHNGSLYDHLFGSGMKKLS 419
L + ST P IVC DL++ G L+ HL G+ S
Sbjct: 242 MLSLV---STGDCPF------IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FS 290
Query: 420 WPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT 479
A GL ++H +++RD+K +NILLDE ++ D GLA +
Sbjct: 291 EADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 347
Query: 480 HLTTRVAGTLGYVAPEYALYG-KLTPGSDVYSFGVVLLELLSG 521
H + GT GY+APE G +D +S G +L +LL G
Sbjct: 348 HASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 320 FSRENIIGKGGYGNVYKG-MLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLV 377
+ IG GG+ V + G VA+K + D K E+E + +++H ++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 378 ALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY 436
L Y LE +I +V + G L+D++ +LS + +AY
Sbjct: 72 QL--YHV----LETANKIFMVLEYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAY 123
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPE 495
+H HRD+K N+L DE + K+ DFGL AK HL T G+L Y APE
Sbjct: 124 VH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPE 179
Query: 496 YALYGKLTPGS--DVYSFGVVLLELLSG 521
+ GK GS DV+S G++L L+ G
Sbjct: 180 -LIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKR--FKN-CSKAG-DANFKHEVEIIASVKHVNLVALRG 381
+GKG +GNVY + + FK+ K G + + E+EI + ++H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 382 YSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYG 440
Y +RI ++ + G LY L G L A LHY
Sbjct: 82 Y------FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA-----LHYC 130
Query: 441 VQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR-VAGTLGYVAPEYALY 499
+ +IHRDIK N+L+ E K+ DFG + P L R + GTL Y+ PE
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEMIEG 186
Query: 500 GKLTPGSDVYSFGVVLLELLSG 521
D++ GV+ E L G
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFK--HEVEIIASVKHVN 375
N+ IGKG + V + G EVA+K + K EV I+ + H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSG-MKKLSWPIRLRIALGTARGL 434
+V L L ++ + G ++D+L G MK+ + R + +
Sbjct: 76 IVKLFEVIETEKTL-----YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ-- 128
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
Y H Q I+HRD+KA N+LLD K+ DFG + N + G Y AP
Sbjct: 129 -YCH---QKRIVHRDLKAENLLLDADMNIKIADFGFS--NEFTVGGKLDAFCGAPPYAAP 182
Query: 495 EYALYGKLT-PGSDVYSFGVVLLELLSG 521
E K P DV+S GV+L L+SG
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 19/213 (8%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDA-NFKHEVEIIASVKHVNL 376
+F ++++G+G YG V P G VA+K+ + K A E++I+ KH N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 377 VALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY 436
+ + E + + L L+ + + M LS T R +
Sbjct: 72 ITIFNIQRPDS-FENFNEVYIIQELMQTDLH-RVISTQM--LSDDHIQYFIYQTLRAVKV 127
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---------NPEGITHLTTRVAG 487
LH +IHRD+K SN+L++ + KV DFGLA+ P G T
Sbjct: 128 LHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 488 TLGYVAPEYALY-GKLTPGSDVYSFGVVLLELL 519
T Y APE L K + DV+S G +L EL
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 19/207 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCS----KAGDANFKHEVEIIASVKHVNLVALRG 381
+GKGG+ ++ + EV + S E+ I S+ H ++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 382 YSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYG 440
+ E + + +V +L SL + K L+ P G YLH
Sbjct: 89 F------FEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN 140
Query: 441 VQPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTTRVAGTLGYVAPEYALY 499
+IHRD+K N+ L+E E K+GDFGLA K +G T + GT Y+APE
Sbjct: 141 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSK 195
Query: 500 GKLTPGSDVYSFGVVLLELLSGKKACE 526
+ DV+S G ++ LL GK E
Sbjct: 196 KGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 19/207 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCS----KAGDANFKHEVEIIASVKHVNLVALRG 381
+GKGG+ ++ + EV + S E+ I S+ H ++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 382 YSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYG 440
+ E + + +V +L SL + K L+ P G YLH
Sbjct: 85 F------FEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 441 VQPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTTRVAGTLGYVAPEYALY 499
+IHRD+K N+ L+E E K+GDFGLA K +G T + GT Y+APE
Sbjct: 137 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSK 191
Query: 500 GKLTPGSDVYSFGVVLLELLSGKKACE 526
+ DV+S G ++ LL GK E
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 360 NFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLS 419
N + E+EI+ + H ++ ++ + + IV +L+ G L+D + G+ K+L
Sbjct: 186 NVETEIEILKKLNHPCIIKIKNF------FDAEDYYIVLELMEGGELFDKVVGN--KRLK 237
Query: 420 WPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPE 476
+ YLH + IIHRD+K N+LL E K+ DFG +K
Sbjct: 238 EATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--L 292
Query: 477 GITHLTTRVAGTLGYVAPEYALYGKLTPG----SDVYSFGVVLLELLSG 521
G T L + GT Y+APE L T G D +S GV+L LSG
Sbjct: 293 GETSLMRTLCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 19/207 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCS----KAGDANFKHEVEIIASVKHVNLVALRG 381
+GKGG+ ++ + EV + S E+ I S+ H ++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 382 YSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYG 440
+ E + + +V +L SL + K L+ P G YLH
Sbjct: 85 F------FEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 441 VQPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTTRVAGTLGYVAPEYALY 499
+IHRD+K N+ L+E E K+GDFGLA K +G T + GT Y+APE
Sbjct: 137 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSK 191
Query: 500 GKLTPGSDVYSFGVVLLELLSGKKACE 526
+ DV+S G ++ LL GK E
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 19/213 (8%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDA-NFKHEVEIIASVKHVNL 376
+F ++++G+G YG V P G VA+K+ + K A E++I+ KH N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 377 VALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY 436
+ + E + + L L+ + + M LS T R +
Sbjct: 72 ITIFNIQRPDS-FENFNEVYIIQELMQTDLH-RVISTQM--LSDDHIQYFIYQTLRAVKV 127
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---------NPEGITHLTTRVAG 487
LH +IHRD+K SN+L++ + KV DFGLA+ P G T
Sbjct: 128 LHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 488 TLGYVAPEYALY-GKLTPGSDVYSFGVVLLELL 519
T Y APE L K + DV+S G +L EL
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 360 NFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLS 419
N + E+EI+ + H ++ ++ + + IV +L+ G L+D + G+ K+L
Sbjct: 200 NVETEIEILKKLNHPCIIKIKNF------FDAEDYYIVLELMEGGELFDKVVGN--KRLK 251
Query: 420 WPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPE 476
+ YLH + IIHRD+K N+LL E K+ DFG +K
Sbjct: 252 EATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--L 306
Query: 477 GITHLTTRVAGTLGYVAPEYALYGKLTPG----SDVYSFGVVLLELLSG 521
G T L + GT Y+APE L T G D +S GV+L LSG
Sbjct: 307 GETSLMRTLCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 30/225 (13%)
Query: 320 FSRENI-----IGKGGYGNVYK------GMLPNGTEVAVKRFKNCSKAGDAN-FKHEVEI 367
F R N+ +G G +G V + G +VAVK K+ + A + E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 368 IASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI 426
++ + +H N+V L G T P+ +++ + G L + L + L I
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPV-----LVITEYCCYGDLLNFLRRKS-RVLETDPAFAI 156
Query: 427 ALGTARGLAYLHYGVQPA----------IIHRDIKASNILLDEAFEAKVGDFGLAKFNPE 476
A TA LH+ Q A IHRD+ A N+LL AK+GDFGLA+
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 216
Query: 477 GITHLTTRVAG-TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
++ A + ++APE T SDV+S+G++L E+ S
Sbjct: 217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GL+
Sbjct: 64 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLS 117
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + T V TL Y APE
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 173
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 360 NFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLS 419
N + E+EI+ + H ++ ++ + + IV +L+ G L+D + G+ K+L
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNF------FDAEDYYIVLELMEGGELFDKVVGN--KRLK 112
Query: 420 WPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPE 476
+ YLH + IIHRD+K N+LL E K+ DFG +K
Sbjct: 113 EATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-- 167
Query: 477 GITHLTTRVAGTLGYVAPEYALYGKLTPG----SDVYSFGVVLLELLSG 521
G T L + GT Y+APE L T G D +S GV+L LSG
Sbjct: 168 GETSLMRTLCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 360 NFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLS 419
N + E+EI+ + H ++ ++ + + IV +L+ G L+D + G+ K+L
Sbjct: 60 NVETEIEILKKLNHPCIIKIKNF------FDAEDYYIVLELMEGGELFDKVVGN--KRLK 111
Query: 420 WPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPE 476
+ YLH + IIHRD+K N+LL E K+ DFG +K
Sbjct: 112 EATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-- 166
Query: 477 GITHLTTRVAGTLGYVAPEYALYGKLTPG----SDVYSFGVVLLELLSG 521
G T L + GT Y+APE L T G D +S GV+L LSG
Sbjct: 167 GETSLMRTLCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 320 FSRENIIGKGGYGNVY--KGMLPNGTEVAVK---RFKNCSKAGDANFKHEVEIIASVKHV 374
+ + ++GKG +G V K + G E AVK + + K + EV+++ + H
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 375 NLVAL------RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL 428
N+ L +GY +V ++ G L+D + K+ S RI
Sbjct: 87 NIXKLYEFFEDKGYF-----------YLVGEVYTGGELFDEIIS--RKRFSEVDAARIIR 133
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPEGITHLTTRV 485
G+ Y H + I+HRD+K N+LL+ + ++ DFGL+ + E ++
Sbjct: 134 QVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKXKDKI 189
Query: 486 AGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
GT Y+APE L+G DV+S GV+L LLSG
Sbjct: 190 -GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 360 NFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLS 419
N + E+EI+ + H ++ ++ + + IV +L+ G L+D + G+ K+L
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNF------FDAEDYYIVLELMEGGELFDKVVGN--KRLK 112
Query: 420 WPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFE---AKVGDFGLAKFNPE 476
+ YLH + IIHRD+K N+LL E K+ DFG +K
Sbjct: 113 EATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-- 167
Query: 477 GITHLTTRVAGTLGYVAPEYALYGKLTPG----SDVYSFGVVLLELLSG 521
G T L + GT Y+APE L T G D +S GV+L LSG
Sbjct: 168 GETSLMRTLCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 360 NFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLS 419
N + E+EI+ + H ++ ++ + + IV +L+ G L+D + G+ K+L
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNF------FDAEDYYIVLELMEGGELFDKVVGN--KRLK 112
Query: 420 WPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFE---AKVGDFGLAKFNPE 476
+ YLH + IIHRD+K N+LL E K+ DFG +K
Sbjct: 113 EATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-- 167
Query: 477 GITHLTTRVAGTLGYVAPEYALYGKLTPG----SDVYSFGVVLLELLSG 521
G T L + GT Y+APE L T G D +S GV+L LSG
Sbjct: 168 GETSLMRTLCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 326 IGKGGYGNV-YKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYST 384
IG+G G V + +G VAVK+ + +EV I+ +H N+V + Y++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM--YNS 94
Query: 385 ATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPA 444
V G + +V + L G+L D + + M + + L + L+ LH
Sbjct: 95 YLV---GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQ---G 145
Query: 445 IIHRDIKASNILLDEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEYALYGKLT 503
+IHRDIK+ +ILL K+ DFG A+ + E + GT ++APE
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYG 203
Query: 504 PGSDVYSFGVVLLELLSGK 522
P D++S G++++E++ G+
Sbjct: 204 PEVDIWSLGIMVIEMVDGE 222
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 326 IGKGGYGNV-YKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYST 384
IG+G G V + +G VAVK+ + +EV I+ +H N+V + Y++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM--YNS 96
Query: 385 ATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPA 444
V G + +V + L G+L D + + M + + L + L+ LH
Sbjct: 97 YLV---GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQ---G 147
Query: 445 IIHRDIKASNILLDEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEYALYGKLT 503
+IHRDIK+ +ILL K+ DFG A+ + E + GT ++APE
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYG 205
Query: 504 PGSDVYSFGVVLLELLSGK 522
P D++S G++++E++ G+
Sbjct: 206 PEVDIWSLGIMVIEMVDGE 224
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 113/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 44 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 98
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 99 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 156
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++++
Sbjct: 157 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 212
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 213 SRY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 326 IGKGGYGNV-YKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYST 384
IG+G G V + +G VAVK+ + +EV I+ +H N+V + Y++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM--YNS 85
Query: 385 ATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPA 444
V G + +V + L G+L D + + M + + L + L+ LH
Sbjct: 86 YLV---GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQ---G 136
Query: 445 IIHRDIKASNILLDEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEYALYGKLT 503
+IHRDIK+ +ILL K+ DFG A+ + E + GT ++APE
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYG 194
Query: 504 PGSDVYSFGVVLLELLSGK 522
P D++S G++++E++ G+
Sbjct: 195 PEVDIWSLGIMVIEMVDGE 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 105/242 (43%), Gaps = 40/242 (16%)
Query: 326 IGKGGYGNVYKGM-LPNGTE-VAVKRFKNCSKAGDANFK----HEVEII---ASVKHVNL 376
IG+G YG V+K L NG VA+KR + + G+ EV ++ + +H N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVR--VQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 377 VALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP------IRLRIALGT 430
V L + TV + + H D + + K+ P I+ +
Sbjct: 77 VRL--FDVCTVSRTDRETKLTLVFEH----VDQDLTTYLDKVPEPGVPTETIK-DMMFQL 129
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLG 490
RGL +LH ++HRD+K NIL+ + + K+ DFGLA+ T V TL
Sbjct: 130 LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLW 184
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKTLD 550
Y APE L D++S G + E+ K + +G S ++ + GK LD
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP---LFRGSS--------DVDQLGKILD 233
Query: 551 VI 552
VI
Sbjct: 234 VI 235
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 113/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 29 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 83
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 84 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 141
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++++
Sbjct: 142 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 197
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 198 SRY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 32/208 (15%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
IG+G YG VYK G A+K R + + + E+ I+ +KH N+V L Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL--YD 67
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR--------GLA 435
+ +R+++ +++HL +KKL + TA+ G+A
Sbjct: 68 V----IHTKKRLVL--------VFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
Y H ++HRD+K N+L++ E K+ DFGLA+ + T V TL Y AP+
Sbjct: 115 YCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPD 170
Query: 496 YALYG--KLTPGSDVYSFGVVLLELLSG 521
L G K + D++S G + E+++G
Sbjct: 171 -VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 113/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 70
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++++
Sbjct: 129 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 185 SRY-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 360 NFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLS 419
N + E+EI+ + H ++ ++ + + IV +L+ G L+D + G+ K+L
Sbjct: 67 NVETEIEILKKLNHPCIIKIKNF------FDAEDYYIVLELMEGGELFDKVVGN--KRLK 118
Query: 420 WPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPE 476
+ YLH + IIHRD+K N+LL E K+ DFG +K
Sbjct: 119 EATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-- 173
Query: 477 GITHLTTRVAGTLGYVAPEYALYGKLTPG----SDVYSFGVVLLELLSG 521
G T L + GT Y+APE L T G D +S GV+L LSG
Sbjct: 174 GETSLMRTLCGTPTYLAPE-VLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 32/208 (15%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
IG+G YG VYK G A+K R + + + E+ I+ +KH N+V L Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL--YD 67
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR--------GLA 435
+ +R+++ +++HL +KKL + TA+ G+A
Sbjct: 68 V----IHTKKRLVL--------VFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
Y H ++HRD+K N+L++ E K+ DFGLA+ + T V TL Y AP+
Sbjct: 115 YCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPD 170
Query: 496 YALYG--KLTPGSDVYSFGVVLLELLSG 521
L G K + D++S G + E+++G
Sbjct: 171 -VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 113/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 50 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 104
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 162
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++++
Sbjct: 163 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 218
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 219 SRY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 64 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 109/220 (49%), Gaps = 29/220 (13%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIAS 370
E+KA + E +G+G YG V K +P+G +AVKR + + + + +++ S
Sbjct: 47 EVKADDLEPIME--LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK-RLLMDLDIS 103
Query: 371 VKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL---YDHLFGSGMKKLSWPIRLRIA 427
++ V+ + A EG + +C L + SL Y + G + + I +IA
Sbjct: 104 MRTVDCPFTVTFYGALF-REGD--VWICMELMDTSLDKFYKQVIDKG-QTIPEDILGKIA 159
Query: 428 LGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG 487
+ + L +LH + ++IHRD+K SN+L++ + K+ DFG++ + + + T AG
Sbjct: 160 VSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK--TIDAG 215
Query: 488 TLGYVAPEYALYGKLTP---------GSDVYSFGVVLLEL 518
Y+APE ++ P SD++S G+ ++EL
Sbjct: 216 CKPYMAPE-----RINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 64 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 326 IGKGGYGNV-YKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYST 384
IG+G G V + +G VAVK+ + +EV I+ +H N+V + Y++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM--YNS 216
Query: 385 ATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPA 444
V G + +V + L G+L D + + M + + L + L+ LH
Sbjct: 217 YLV---GDELWVVMEFLEGGALTDIVTHTRMNEEQI---AAVCLAVLQALSVLHAQ---G 267
Query: 445 IIHRDIKASNILLDEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEYALYGKLT 503
+IHRDIK+ +ILL K+ DFG A+ + E + GT ++APE
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYG 325
Query: 504 PGSDVYSFGVVLLELLSGK 522
P D++S G++++E++ G+
Sbjct: 326 PEVDIWSLGIMVIEMVDGE 344
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 64 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 113/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 21 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 75
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 133
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++++
Sbjct: 134 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 189
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 190 SRY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 64 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 63 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 117 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 172
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 113/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 54 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 108
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 109 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 166
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++++
Sbjct: 167 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 222
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 223 SRY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 113/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 52 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 106
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 107 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 164
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++++
Sbjct: 165 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 220
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 221 SRY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE + SD+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+ R ++ + E+ ++ + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 64 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + T V TL Y APE
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 173
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+ R ++ + E+ ++ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 63 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + T V TL Y APE
Sbjct: 117 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 172
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 63 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 117 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 172
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 65 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 119 FCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 65 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 119 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 19/207 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCS----KAGDANFKHEVEIIASVKHVNLVALRG 381
+GKGG+ ++ + EV + S E+ I S+ H ++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 382 YSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYG 440
+ E + + +V +L SL + K L+ P G YLH
Sbjct: 107 F------FEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN 158
Query: 441 VQPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTTRVAGTLGYVAPEYALY 499
+IHRD+K N+ L+E E K+GDFGLA K +G + GT Y+APE
Sbjct: 159 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSK 213
Query: 500 GKLTPGSDVYSFGVVLLELLSGKKACE 526
+ DV+S G ++ LL GK E
Sbjct: 214 KGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 32/208 (15%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
IG+G YG VYK G A+K R + + + E+ I+ +KH N+V L Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL--YD 67
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR--------GLA 435
+ +R+++ +++HL +KKL + TA+ G+A
Sbjct: 68 V----IHTKKRLVL--------VFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
Y H ++HRD+K N+L++ E K+ DFGLA+ + T + TL Y AP+
Sbjct: 115 YCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPD 170
Query: 496 YALYG--KLTPGSDVYSFGVVLLELLSG 521
L G K + D++S G + E+++G
Sbjct: 171 -VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 326 IGKGGYGNV-YKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYST 384
IG+G G V + +G VAVK+ + +EV I+ +H N+V + Y++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM--YNS 89
Query: 385 ATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPA 444
V G + +V + L G+L D + + M + + L + L+ LH
Sbjct: 90 YLV---GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQ---G 140
Query: 445 IIHRDIKASNILLDEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEYALYGKLT 503
+IHRDIK+ +ILL K+ DFG A+ + E + GT ++APE
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYG 198
Query: 504 PGSDVYSFGVVLLELLSGK 522
P D++S G++++E++ G+
Sbjct: 199 PEVDIWSLGIMVIEMVDGE 217
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 105/242 (43%), Gaps = 40/242 (16%)
Query: 326 IGKGGYGNVYKGM-LPNGTE-VAVKRFKNCSKAGDANFK----HEVEII---ASVKHVNL 376
IG+G YG V+K L NG VA+KR + + G+ EV ++ + +H N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVR--VQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 377 VALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP------IRLRIALGT 430
V L + TV + + H D + + K+ P I+ +
Sbjct: 77 VRL--FDVCTVSRTDRETKLTLVFEH----VDQDLTTYLDKVPEPGVPTETIK-DMMFQL 129
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLG 490
RGL +LH ++HRD+K NIL+ + + K+ DFGLA+ T V TL
Sbjct: 130 LRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLW 184
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKTLD 550
Y APE L D++S G + E+ K + +G S ++ + GK LD
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP---LFRGSS--------DVDQLGKILD 233
Query: 551 VI 552
VI
Sbjct: 234 VI 235
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 67 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 121 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 66 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 120 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 19/207 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCS----KAGDANFKHEVEIIASVKHVNLVALRG 381
+GKGG+ ++ + EV + S E+ I S+ H ++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 382 YSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYG 440
+ E + + +V +L SL + K L+ P G YLH
Sbjct: 83 F------FEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN 134
Query: 441 VQPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTTRVAGTLGYVAPEYALY 499
+IHRD+K N+ L+E E K+GDFGLA K +G + GT Y+APE
Sbjct: 135 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSK 189
Query: 500 GKLTPGSDVYSFGVVLLELLSGKKACE 526
+ DV+S G ++ LL GK E
Sbjct: 190 KGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKHEVEIIASVK 372
+ ++++ +IG G +G VY+ L + E VA+K+ G A E++I+ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLD 71
Query: 373 HVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIALG 429
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 430 TA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLTT 483
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++++ +
Sbjct: 130 QLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 484 RVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
R Y APE ++G T DV+S G VL ELL G+
Sbjct: 186 RY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 66 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 120 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 105/242 (43%), Gaps = 40/242 (16%)
Query: 326 IGKGGYGNVYKGM-LPNGTE-VAVKRFKNCSKAGDANFK----HEVEII---ASVKHVNL 376
IG+G YG V+K L NG VA+KR + + G+ EV ++ + +H N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVR--VQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 377 VALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP------IRLRIALGT 430
V L + TV + + H D + + K+ P I+ +
Sbjct: 77 VRL--FDVCTVSRTDRETKLTLVFEH----VDQDLTTYLDKVPEPGVPTETIK-DMMFQL 129
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLG 490
RGL +LH ++HRD+K NIL+ + + K+ DFGLA+ T V TL
Sbjct: 130 LRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLW 184
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAWELVKEGKTLD 550
Y APE L D++S G + E+ K + +G S ++ + GK LD
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP---LFRGSS--------DVDQLGKILD 233
Query: 551 VI 552
VI
Sbjct: 234 VI 235
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 41/226 (18%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRF----------KNCSKAGDANFKHEVEI 367
N+ + I+G+G V + + P E AVK + + +A K EV+I
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK-EVDI 63
Query: 368 IASVK-HVNLVALRG-YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLR 425
+ V H N++ L+ Y T T +V DL+ G L+D+L + LS +
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTF------FFLVFDLMKKGELFDYL--TEKVTLSEKETRK 115
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTTR 484
I + LH + I+HRD+K NILLD+ K+ DFG + + +P
Sbjct: 116 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---GEKLRE 169
Query: 485 VAGTLGYVAPE---------YALYGKLTPGSDVYSFGVVLLELLSG 521
V GT Y+APE + YGK D++S GV++ LL+G
Sbjct: 170 VCGTPSYLAPEIIECSMNDNHPGYGKEV---DMWSTGVIMYTLLAG 212
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 66 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 120 FCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKHEVEIIASVK 372
+ ++++ +IG G +G VY+ L + E VA+K+ G A E++I+ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLD 71
Query: 373 HVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIALG 429
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 430 TA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLTT 483
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++++ +
Sbjct: 130 QLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 484 RVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
R Y APE ++G T DV+S G VL ELL G+
Sbjct: 186 RY-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 65 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 119 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 68 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 122 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 177
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 122/244 (50%), Gaps = 35/244 (14%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 95 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 149
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 150 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 207
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++++
Sbjct: 208 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 263
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSDWAW 540
+R Y APE ++G T DV+S G VL ELL G+ I G S + D
Sbjct: 264 SRY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGV--DQLV 312
Query: 541 ELVK 544
E++K
Sbjct: 313 EIIK 316
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 92/217 (42%), Gaps = 26/217 (11%)
Query: 315 AATMNFSRENIIGKGGYGNVYKGMLPNGTEV--AVKRFKNCSKAGDANFKHEVE----II 368
A +F +IGKG +G V EV AVK + + KH + ++
Sbjct: 35 AKPSDFHFLKVIGKGSFGKVLLARH-KAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 369 ASVKHVNLVALR-GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI- 426
+VKH LV L + TA + V D ++ G L+ HL ++ R R
Sbjct: 94 KNVKHPFLVGLHFSFQTAD------KLYFVLDYINGGELFYHL---QRERCFLEPRARFY 144
Query: 427 ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTR 484
A A L YLH I++RD+K NILLD + DFGL K E I H T+
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTST 198
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
GT Y+APE D + G VL E+L G
Sbjct: 199 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 326 IGKGGYGNV-YKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYST 384
IG+G G V + +G VAVK+ + +EV I+ +H N+V + Y++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM--YNS 139
Query: 385 ATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPA 444
V G + +V + L G+L D + + M + + L + L+ LH
Sbjct: 140 YLV---GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQ---G 190
Query: 445 IIHRDIKASNILLDEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEYALYGKLT 503
+IHRDIK+ +ILL K+ DFG A+ + E + GT ++APE
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYG 248
Query: 504 PGSDVYSFGVVLLELLSGK 522
P D++S G++++E++ G+
Sbjct: 249 PEVDIWSLGIMVIEMVDGE 267
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 113 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 108/246 (43%), Gaps = 41/246 (16%)
Query: 308 FKIEEIKAATMNFSRENII-----GKGGYGNVYKGML------PNGTEVAVKRFK-NCSK 355
FKI ++ F R+N++ G+G +G V K T VAVK K N S
Sbjct: 10 FKI--LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP 67
Query: 356 AGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHL----- 410
+ + E ++ V H +++ L G + PL +++ + GSL L
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL-----LLIVEYAKYGSLRGFLRESRK 122
Query: 411 FGSG---------MKKLSWPIRLRIALGTARGLAY-----LHYGVQPAIIHRDIKASNIL 456
G G L P + +G A+ + Y + ++HRD+ A NIL
Sbjct: 123 VGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNIL 182
Query: 457 LDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTL--GYVAPEYALYGKLTPGSDVYSFGVV 514
+ E + K+ DFGL++ E +++ R G + ++A E T SDV+SFGV+
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSYV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 515 LLELLS 520
L E+++
Sbjct: 242 LWEIVT 247
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 114 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 67 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 121 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 115 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDA-NFKHEVEIIASVKHVNL 376
+F ++++G+G YG V P G VA+K+ + K A E++I+ KH N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 377 VALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY 436
+ + E + + L L+ + + M LS T R +
Sbjct: 72 ITIFNIQRPDS-FENFNEVYIIQELMQTDLH-RVISTQM--LSDDHIQYFIYQTLRAVKV 127
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---------NPEGITHLTTRVAG 487
LH +IHRD+K SN+L++ + KV DFGLA+ P G
Sbjct: 128 LHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 488 TLGYVAPEYALY-GKLTPGSDVYSFGVVLLELL 519
T Y APE L K + DV+S G +L EL
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 38/240 (15%)
Query: 300 SRSSNLARFKIEEIKAATMNFSR--ENI--IGKGGYGNV---YKGMLPNGTEVAVKR--- 349
SRS F EI +T + +N+ IG G G V Y +L VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSR 59
Query: 350 -FKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL-- 406
F+N + A A E+ ++ V H N++ L T LE Q + + L + +L
Sbjct: 60 PFQNQTHAKRAY--RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ 117
Query: 407 -----YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAF 461
DH +++S+ + + G+ +LH IIHRD+K SNI++
Sbjct: 118 VIQMELDH------ERMSYLLYQMLV-----GIKHLHSA---GIIHRDLKPSNIVVKSDA 163
Query: 462 EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
K+ DFGLA+ G + + T T Y APE L D++S GV++ E++ G
Sbjct: 164 TLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 70
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++ +
Sbjct: 129 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 185 SRY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 116 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 50 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 104
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 162
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++ +
Sbjct: 163 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 218
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 219 SRY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 19/207 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCS----KAGDANFKHEVEIIASVKHVNLVALRG 381
+GKGG+ ++ + EV + S E+ I S+ H ++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 382 YSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYG 440
+ E + + +V +L SL + K L+ P G YLH
Sbjct: 109 F------FEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN 160
Query: 441 VQPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTTRVAGTLGYVAPEYALY 499
+IHRD+K N+ L+E E K+GDFGLA K +G + GT Y+APE
Sbjct: 161 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSK 215
Query: 500 GKLTPGSDVYSFGVVLLELLSGKKACE 526
+ DV+S G ++ LL GK E
Sbjct: 216 KGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + LH L + S + + P+ +GLA
Sbjct: 67 IVKL-----LDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 121 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + +H L + S + + P+ +GLA
Sbjct: 63 IVKL-----LDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + T V TL Y APE
Sbjct: 117 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 172
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 41/226 (18%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRF----------KNCSKAGDANFKHEVEI 367
N+ + I+G+G V + + P E AVK + + +A K EV+I
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK-EVDI 76
Query: 368 IASVK-HVNLVALRG-YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLR 425
+ V H N++ L+ Y T T +V DL+ G L+D+L + LS +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTF------FFLVFDLMKKGELFDYL--TEKVTLSEKETRK 128
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTTR 484
I + LH + I+HRD+K NILLD+ K+ DFG + + +P
Sbjct: 129 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---GEKLRE 182
Query: 485 VAGTLGYVAPE---------YALYGKLTPGSDVYSFGVVLLELLSG 521
V GT Y+APE + YGK D++S GV++ LL+G
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEV---DMWSTGVIMYTLLAG 225
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 120 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 35 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 89
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 90 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 147
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++ +
Sbjct: 148 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 203
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 204 SRY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 135 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 24 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 78
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 79 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 136
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++ +
Sbjct: 137 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 192
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 193 SRY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 135 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 34/210 (16%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N++
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAY--RELVLMKVVNHKNIIG 87
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSL-------YDHLFGSGMKKLSWPIRLRIALGTA 431
L T LE Q + + L + +L DH +++S+ + +
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH------ERMSYLLYQMLV---- 137
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
G+ +LH IIHRD+K SNI++ K+ DFGLA+ G + + T T Y
Sbjct: 138 -GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
APE L D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 70
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++ +
Sbjct: 129 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 185 SRY-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 93/211 (44%), Gaps = 24/211 (11%)
Query: 320 FSRENIIGKGGYGNVY--KGMLPNGTEVAVKRFKNCSKAGDAN---FKHEVEIIASVKHV 374
+ R +G G YG V K L G E A+K K S +N EV ++ + H
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 81
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
N++ L + + +V ++ G L+D + +K S I G
Sbjct: 82 NIMKLYEFFE-----DKRNYYLVMEVYRGGELFDEIILR--QKFSEVDAAVIMKQVLSGT 134
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGL-AKFNPEGITHLTTRVAGTLG 490
YLH + I+HRD+K N+LL+ K+ DFGL A F G + R+ GT
Sbjct: 135 TYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG--KMKERL-GTAY 188
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
Y+APE L K DV+S GV+L LL G
Sbjct: 189 YIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L + ++ + + L D + S + + P+ +GLA
Sbjct: 67 IVKLLDV------IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 121 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + L + L D + S + + P+ +GLA
Sbjct: 66 IVKL-----LDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 120 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 143 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 108/246 (43%), Gaps = 41/246 (16%)
Query: 308 FKIEEIKAATMNFSRENII-----GKGGYGNVYKGML------PNGTEVAVKRFK-NCSK 355
FKI ++ F R+N++ G+G +G V K T VAVK K N S
Sbjct: 10 FKI--LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP 67
Query: 356 AGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHL----- 410
+ + E ++ V H +++ L G + PL +++ + GSL L
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL-----LLIVEYAKYGSLRGFLRESRK 122
Query: 411 FGSG---------MKKLSWPIRLRIALGTARGLAY-----LHYGVQPAIIHRDIKASNIL 456
G G L P + +G A+ + Y + +++HRD+ A NIL
Sbjct: 123 VGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNIL 182
Query: 457 LDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTL--GYVAPEYALYGKLTPGSDVYSFGVV 514
+ E + K+ DFGL++ E + + R G + ++A E T SDV+SFGV+
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 515 LLELLS 520
L E+++
Sbjct: 242 LWEIVT 247
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 17 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 71
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 72 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 129
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++ +
Sbjct: 130 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 185
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 186 SRY-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 28 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 82
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 140
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++ +
Sbjct: 141 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 196
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 197 SRY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 28 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 82
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 140
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++ +
Sbjct: 141 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 196
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 197 SRY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 34/224 (15%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 70
Query: 372 KHVNLVALRGYSTATVPLEGHQR-IIVCDLLHN---GSLYDHLFGSGMKKLSWP-IRLRI 426
H N+V LR + ++ G ++ ++ +L+ + ++Y K + P I +++
Sbjct: 71 DHCNIVRLRYFFYSS----GEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 427 ALGTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITH 480
+ R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++
Sbjct: 127 YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 182
Query: 481 LTTRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+ +R Y APE ++G T DV+S G VL ELL G+
Sbjct: 183 ICSRY-----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 139 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 86/208 (41%), Gaps = 18/208 (8%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFK--HEVEIIASVKHVN 375
N+ IGKG + V + G EVAVK + K EV I + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL- 434
+V L L +V + G ++D+L G K + A R +
Sbjct: 75 IVKLFEVIETEKTL-----YLVXEYASGGEVFDYLVAHGRXKE------KEARAKFRQIV 123
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
+ + Y Q I+HRD+KA N+LLD K+ DFG + N + G Y AP
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS--NEFTFGNKLDAFCGAPPYAAP 181
Query: 495 EYALYGKLT-PGSDVYSFGVVLLELLSG 521
E K P DV+S GV+L L+SG
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 41/226 (18%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRF----------KNCSKAGDANFKHEVEI 367
N+ + I+G+G V + + P E AVK + + +A K EV+I
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK-EVDI 76
Query: 368 IASVK-HVNLVALRG-YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLR 425
+ V H N++ L+ Y T T +V DL+ G L+D+L + LS +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTF------FFLVFDLMKKGELFDYL--TEKVTLSEKETRK 128
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTTR 484
I + LH + I+HRD+K NILLD+ K+ DFG + + +P
Sbjct: 129 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---GEKLRS 182
Query: 485 VAGTLGYVAPE---------YALYGKLTPGSDVYSFGVVLLELLSG 521
V GT Y+APE + YGK D++S GV++ LL+G
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEV---DMWSTGVIMYTLLAG 225
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 139 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 320 FSRENI-----IGKGGYGNVYK------GMLPNGTEVAVKRFKNCSKAGDAN-FKHEVEI 367
F R N+ +G G +G V + G +VAVK K+ + A + E++I
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 368 IASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHL-------FGSGM---- 415
++ + +H N+V L G T P+ +++ + G L + L G +
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPV-----LVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQ 142
Query: 416 ------KKLSWPIRLRIAL----GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKV 465
K+ P+ LR L A+G+A+L IHRD+ A N+LL AK+
Sbjct: 143 DPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKI 199
Query: 466 GDFGLAKFNPEGITHLTTRVAG-TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
GDFGLA+ ++ A + ++APE T SDV+S+G++L E+ S
Sbjct: 200 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 97/233 (41%), Gaps = 46/233 (19%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLV 377
+F ++G+G +G V K + A+K+ ++ + + EV ++AS+ H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVXLLASLNHQYVV 65
Query: 378 -----------------ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW 420
A++ ST + E + + DL+H+ +L + + W
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENL------NQQRDEYW 119
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF------- 473
R+ L+Y+H IIHR++K NI +DE+ K+GDFGLAK
Sbjct: 120 ----RLFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 474 ------NPEGITHLTTRVAGTLGYVAPEYAL-YGKLTPGSDVYSFGVVLLELL 519
N G + T GT YVA E G D YS G++ E +
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 30/222 (13%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKH-EVEIIASV 371
+ ++++ +IG G +G VY+ L + E VA+K+ D FK+ E++I+ +
Sbjct: 20 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 74
Query: 372 KHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIAL 428
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 75 DHCNIVRLRYFFYSSGEKKDEVYLNLVL-DYVPE-TVYRVARHYSRAKQTLPVIYVKLYM 132
Query: 429 GTA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLT 482
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++ +
Sbjct: 133 YQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 188
Query: 483 TRVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
+R Y APE ++G T DV+S G VL ELL G+
Sbjct: 189 SRY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V + +L G VAVK+ F+N + A A E+ ++ V H N+++
Sbjct: 32 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAY--RELVLLKCVNHKNIIS 87
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGLAYL 437
L T LE Q + + L + +L + +++S+ + + G+ +L
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC-----GIKHL 142
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYA 497
H IIHRD+K SNI++ K+ DFGLA+ + T T Y APE
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRYYRAPEVI 197
Query: 498 LYGKLTPGSDVYSFGVVLLELLSGKKACEIIQG 530
L D++S G ++ EL+ G C I QG
Sbjct: 198 LGMGYAANVDIWSVGCIMGELVKG---CVIFQG 227
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 18/203 (8%)
Query: 326 IGKGGYGNVY-KGMLPNGTEVAVKRF-KNCSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
+G G +G+V+ +G E +K K+ S+ + E+E++ S+ H N++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI---- 85
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGM--KKLSWPIRLRIALGTARGLAYLHYGV 441
V + H IV + G L + + + K LS + LAY H
Sbjct: 86 -FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH--- 141
Query: 442 QPAIIHRDIKASNILLDEA---FEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL 498
++H+D+K NIL + K+ DFGLA+ +T AGT Y+APE
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD--EHSTNAAGTALYMAPE-VF 198
Query: 499 YGKLTPGSDVYSFGVVLLELLSG 521
+T D++S GVV+ LL+G
Sbjct: 199 KRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFKNCSKAGDANFKHEVEIIASVK 372
+ ++++ +IG G +G VY+ L + E VA+K+ G A E++I+ +
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLD 71
Query: 373 HVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP-IRLRIALG 429
H N+V LR YS+ E + +++ D + ++Y K + P I +++ +
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVL-DYV-PATVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 430 TA-RGLAYLH-YGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEG---ITHLTT 483
R LAY+H +G I HRDIK N+LLD + K+ DFG AK G ++ + +
Sbjct: 130 QLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 484 RVAGTLGYVAPEYALYG--KLTPGSDVYSFGVVLLELLSGK 522
R Y APE ++G T DV+S G VL ELL G+
Sbjct: 186 RY-----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVALRGYST 384
+G G +G VYK + +A + + + ++ E++I+AS H N+V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD--- 101
Query: 385 ATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-RLRIALGTARGLAYLHYGVQP 443
E + I++ + G++ + M +L P+ +I + + L L+Y
Sbjct: 102 -AFYYENNLWILI-EFCAGGAV-----DAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 444 AIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL--YGK 501
IIHRD+KA NIL + K+ DFG++ N I + + GT ++APE + K
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETSK 213
Query: 502 LTP---GSDVYSFGVVLLEL 518
P +DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGT 488
TA ++ L Y IIHRD+K NILL+E ++ DFG AK +PE GT
Sbjct: 141 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
YV+PE SD+++ G ++ +L++G
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 30/213 (14%)
Query: 326 IGKGGYGNVYKGMLPNG-TEVAVKRFKNCS----KAGDAN---------FKHEVEIIASV 371
+G G YG V NG +E A+K K + D N +E+ ++ S+
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTA 431
H N++ L V + +V + G L++ + K I
Sbjct: 104 DHPNIIKL-----FDVFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQIL 156
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEA---FEAKVGDFGLAKFNPEGITHLTTRVAGT 488
G+ YLH + I+HRDIK NILL+ K+ DFGL+ F + L R+ GT
Sbjct: 157 SGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRL-GT 211
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
Y+APE L K DV+S GV++ LL G
Sbjct: 212 AYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVALRGYST 384
+G G +G VYK + +A + + + ++ E++I+AS H N+V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD--- 101
Query: 385 ATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-RLRIALGTARGLAYLHYGVQP 443
E + I++ + G++ + M +L P+ +I + + L L+Y
Sbjct: 102 -AFYYENNLWILI-EFCAGGAV-----DAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 444 AIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL--YGK 501
IIHRD+KA NIL + K+ DFG++ N I + + GT ++APE + K
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMCETSK 213
Query: 502 LTP---GSDVYSFGVVLLEL 518
P +DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 93/211 (44%), Gaps = 24/211 (11%)
Query: 320 FSRENIIGKGGYGNVY--KGMLPNGTEVAVKRFKNCSKAGDAN---FKHEVEIIASVKHV 374
+ R +G G YG V K L G E A+K K S +N EV ++ + H
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 64
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
N++ L + + +V ++ G L+D + +K S I G
Sbjct: 65 NIMKLYEFFE-----DKRNYYLVMEVYRGGELFDEIILR--QKFSEVDAAVIMKQVLSGT 117
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGL-AKFNPEGITHLTTRVAGTLG 490
YLH + I+HRD+K N+LL+ K+ DFGL A F G + R+ GT
Sbjct: 118 TYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG--KMKERL-GTAY 171
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
Y+APE L K DV+S GV+L LL G
Sbjct: 172 YIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 41/225 (18%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVK-HVNLVAL 379
+GKG YG V+K + G VAVK+ F+N + A F+ E+ I+ + H N+V L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDA-QRTFR-EIMILTELSGHENIVNL 74
Query: 380 RGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLR-IALGTARGLAYLH 438
A + + +V D + L + P+ + + + + YLH
Sbjct: 75 LNVLRADNDRDVY---LVFDYMETD-----LHAVIRANILEPVHKQYVVYQLIKVIKYLH 126
Query: 439 YGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK--FNPEGITH---------------- 480
G ++HRD+K SNILL+ KV DFGL++ N +T+
Sbjct: 127 SG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 481 --LTTRVAGTLGYVAPEYAL-YGKLTPGSDVYSFGVVLLELLSGK 522
+ T T Y APE L K T G D++S G +L E+L GK
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIAS 370
E+KA + E +G+G YG V K +P+G +AVKR + + + + +++ S
Sbjct: 3 EVKADDLEPIME--LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK-RLLMDLDIS 59
Query: 371 VKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL---YDHLFGSGMKKLSWPIRLRIA 427
++ V+ + A EG + +C L + SL Y + G + + I +IA
Sbjct: 60 MRTVDCPFTVTFYGALF-REGD--VWICMELMDTSLDKFYKQVIDKG-QTIPEDILGKIA 115
Query: 428 LGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG 487
+ + L +LH + ++IHRD+K SN+L++ + K+ DFG++ + + + AG
Sbjct: 116 VSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID--AG 171
Query: 488 TLGYVAPEYALYGKLTP---------GSDVYSFGVVLLEL 518
Y+APE ++ P SD++S G+ ++EL
Sbjct: 172 CKPYMAPE-----RINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 308 FKIEEIKAATMNFSRENII-----GKGGYGNVYKGML------PNGTEVAVKRFK-NCSK 355
FKI ++ F R+N++ G+G +G V K T VAVK K N S
Sbjct: 10 FKI--LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP 67
Query: 356 AGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHL----- 410
+ + E ++ V H +++ L G + PL +++ + GSL L
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL-----LLIVEYAKYGSLRGFLRESRK 122
Query: 411 FGSG---------MKKLSWPIRLRIALGTARGLAY-----LHYGVQPAIIHRDIKASNIL 456
G G L P + +G A+ + Y + ++HRD+ A NIL
Sbjct: 123 VGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNIL 182
Query: 457 LDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTL--GYVAPEYALYGKLTPGSDVYSFGVV 514
+ E + K+ DFGL++ E + + R G + ++A E T SDV+SFGV+
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 515 LLELLS 520
L E+++
Sbjct: 242 LWEIVT 247
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 36/229 (15%)
Query: 320 FSRENI-----IGKGGYGNVYK------GMLPNGTEVAVKRFKNCSKAGDAN-FKHEVEI 367
F R N+ +G G +G V + G +VAVK K+ + A + E++I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 368 IASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHL--------------FG 412
++ + +H N+V L G T P+ +++ + G L + L
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPV-----LVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
Query: 413 SGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK 472
+ ++LS L + A+G+A+L IHRD+ A N+LL AK+GDFGLA+
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 214
Query: 473 FNPEGITHLTTRVAG-TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
++ A + ++APE T SDV+S+G++L E+ S
Sbjct: 215 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 324 NIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHVNLVAL 379
++G+GG+G V+ M G A K+ ++ E +I+A V +V+L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 380 R-GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW--PIRLRIALGTARGLAY 436
+ T T +V +++ G + H++ + P + GL +
Sbjct: 251 AYAFETKT------DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEY 496
LH Q II+RD+K N+LLD+ ++ D GLA G T T AGT G++APE
Sbjct: 305 LH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPEL 360
Query: 497 ALYGKLTPGSDVYSFGVVLLELLSGK 522
L + D ++ GV L E+++ +
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 303 SNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNG----TEVAVKRFKN--CSKA 356
S+ + K+E++ F+ ++GKG +G+V + L +VAVK K + +
Sbjct: 8 SDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASS 67
Query: 357 GDANFKHEVEIIASVKHVNL-----VALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLF 411
F E + H ++ V+LR + +P+ +++ + +G L+ L
Sbjct: 68 DIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP----MVILPFMKHGDLHAFLL 123
Query: 412 GS--GMKKLSWPIR--LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGD 467
S G + P++ +R + A G+ YL IHRD+ A N +L E V D
Sbjct: 124 ASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVAD 180
Query: 468 FGLAKFNPEGITHLTTRVAGTL--GYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
FGL++ G + A L ++A E T SDV++FGV + E+++
Sbjct: 181 FGLSRKIYSG-DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 325 IIGK-GGYGNVYKGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVALRGY 382
IIG+ G +G VYK + +A + + + ++ E++I+AS H N+V L
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD- 74
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-RLRIALGTARGLAYLHYGV 441
E + I++ + G++ + M +L P+ +I + + L L+Y
Sbjct: 75 ---AFYYENNLWILI-EFCAGGAV-----DAVMLELERPLTESQIQVVCKQTLDALNYLH 125
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL--Y 499
IIHRD+KA NIL + K+ DFG++ N GT ++APE +
Sbjct: 126 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 500 GKLTP---GSDVYSFGVVLLEL 518
K P +DV+S G+ L+E+
Sbjct: 186 SKDRPYDYKADVWSLGITLIEM 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 316 ATMN-FSRENIIGKGGYGNV-YKGMLPNGTEVAVKRFKN---CSKAGDANFKHEVEIIAS 370
TMN F ++GKG +G V G A+K + +K A+ E ++ +
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 371 VKHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI-AL 428
+H L AL+ Y+ T H R+ V + + G L+ HL +++ R R
Sbjct: 62 TRHPFLTALK-YAFQT-----HDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGA 112
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT--RVA 486
L YLH +++RDIK N++LD+ K+ DFGL K EGI+ T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFC 166
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
GT Y+APE D + GVV+ E++ G+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 19/135 (14%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V DL+ G L+D+L + LS I +++LH I+HRD+K NI
Sbjct: 177 LVFDLMRKGELFDYL--TEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENI 231
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE---------YALYGKLTPGS 506
LLD+ + ++ DFG + G + GT GY+APE + YGK
Sbjct: 232 LLDDNMQIRLSDFGFSCHLEPG--EKLRELCGTPGYLAPEILKCSMDETHPGYGKEV--- 286
Query: 507 DVYSFGVVLLELLSG 521
D+++ GV+L LL+G
Sbjct: 287 DLWACGVILFTLLAG 301
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 324 NIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHVNLVAL 379
++G+GG+G V+ M G A K+ ++ E +I+A V +V+L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 380 R-GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW--PIRLRIALGTARGLAY 436
+ T T +V +++ G + H++ + P + GL +
Sbjct: 251 AYAFETKT------DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEY 496
LH Q II+RD+K N+LLD+ ++ D GLA G T T AGT G++APE
Sbjct: 305 LH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPEL 360
Query: 497 ALYGKLTPGSDVYSFGVVLLELLSGK 522
L + D ++ GV L E+++ +
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 23/215 (10%)
Query: 317 TMN-FSRENIIGKGGYGNV-YKGMLPNGTEVAVKRFKN---CSKAGDANFKHEVEIIASV 371
TMN F ++GKG +G V G A+K K +K A+ E ++ +
Sbjct: 6 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 65
Query: 372 KHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI-ALG 429
+H L AL+ YS T H R+ V + + G L+ HL +++ R R
Sbjct: 66 RHPFLTALK-YSFQT-----HDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAE 116
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT--RVAG 487
L YLH + +++RD+K N++LD+ K+ DFGL K EGI T G
Sbjct: 117 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCG 171
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
T Y+APE D + GVV+ E++ G+
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 38/240 (15%)
Query: 300 SRSSNLARFKIEEIKAATMNFSR--ENI--IGKGGYGNV---YKGMLPNGTEVAVKR--- 349
SRS F EI +T + +N+ IG G G V Y +L VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSR 59
Query: 350 -FKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL-- 406
F+N + A A E+ ++ V H N++ L T LE Q + + L + +L
Sbjct: 60 PFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 117
Query: 407 -----YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAF 461
DH +++S+ + + G+ +LH IIHRD+K SNI++
Sbjct: 118 VIQMELDH------ERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 462 EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
K+ DFGLA+ G + + T T Y APE L D++S G ++ E++ G
Sbjct: 164 TLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 324 NIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHVNLVAL 379
++G+GG+G V+ M G A K+ ++ E +I+A V +V+L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 380 R-GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW--PIRLRIALGTARGLAY 436
+ T T +V +++ G + H++ + P + GL +
Sbjct: 251 AYAFETKT------DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEY 496
LH Q II+RD+K N+LLD+ ++ D GLA G T T AGT G++APE
Sbjct: 305 LH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPEL 360
Query: 497 ALYGKLTPGSDVYSFGVVLLELLSGK 522
L + D ++ GV L E+++ +
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 324 NIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHVNLVAL 379
++G+GG+G V+ M G A K+ ++ E +I+A V +V+L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 380 R-GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW--PIRLRIALGTARGLAY 436
+ T T +V +++ G + H++ + P + GL +
Sbjct: 251 AYAFETKT------DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEY 496
LH Q II+RD+K N+LLD+ ++ D GLA G T T AGT G++APE
Sbjct: 305 LH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPEL 360
Query: 497 ALYGKLTPGSDVYSFGVVLLELLSGK 522
L + D ++ GV L E+++ +
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 23/215 (10%)
Query: 317 TMN-FSRENIIGKGGYGNV-YKGMLPNGTEVAVKRFKN---CSKAGDANFKHEVEIIASV 371
TMN F ++GKG +G V G A+K K +K A+ E ++ +
Sbjct: 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 372 KHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI-ALG 429
+H L AL+ YS T H R+ V + + G L+ HL +++ R R
Sbjct: 206 RHPFLTALK-YSFQT-----HDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAE 256
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT--RVAG 487
L YLH + +++RD+K N++LD+ K+ DFGL K EGI T G
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCG 311
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
T Y+APE D + GVV+ E++ G+
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 23/215 (10%)
Query: 317 TMN-FSRENIIGKGGYGNV-YKGMLPNGTEVAVKRFKN---CSKAGDANFKHEVEIIASV 371
TMN F ++GKG +G V G A+K K +K A+ E ++ +
Sbjct: 149 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 208
Query: 372 KHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI-ALG 429
+H L AL+ YS T H R+ V + + G L+ HL +++ R R
Sbjct: 209 RHPFLTALK-YSFQT-----HDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAE 259
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT--RVAG 487
L YLH + +++RD+K N++LD+ K+ DFGL K EGI T G
Sbjct: 260 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCG 314
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
T Y+APE D + GVV+ E++ G+
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 316 ATMN-FSRENIIGKGGYGNV-YKGMLPNGTEVAVKRFKN---CSKAGDANFKHEVEIIAS 370
TMN F ++GKG +G V G A+K + +K A+ E ++ +
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 371 VKHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI-AL 428
+H L AL+ Y+ T H R+ V + + G L+ HL +++ R R
Sbjct: 62 TRHPFLTALK-YAFQT-----HDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGA 112
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT--RVA 486
L YLH +++RDIK N++LD+ K+ DFGL K EGI+ T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFC 166
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
GT Y+APE D + GVV+ E++ G+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 23/215 (10%)
Query: 317 TMN-FSRENIIGKGGYGNV-YKGMLPNGTEVAVKRFKN---CSKAGDANFKHEVEIIASV 371
TMN F ++GKG +G V G A+K K +K A+ E ++ +
Sbjct: 7 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 66
Query: 372 KHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI-ALG 429
+H L AL+ YS T H R+ V + + G L+ HL +++ R R
Sbjct: 67 RHPFLTALK-YSFQT-----HDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAE 117
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT--RVAG 487
L YLH + +++RD+K N++LD+ K+ DFGL K EGI T G
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCG 172
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
T Y+APE D + GVV+ E++ G+
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 316 ATMN-FSRENIIGKGGYGNV-YKGMLPNGTEVAVKRFKN---CSKAGDANFKHEVEIIAS 370
TMN F ++GKG +G V G A+K + +K A+ E ++ +
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 371 VKHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI-AL 428
+H L AL+ Y+ T H R+ V + + G L+ HL +++ R R
Sbjct: 62 TRHPFLTALK-YAFQT-----HDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGA 112
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT--RVA 486
L YLH +++RDIK N++LD+ K+ DFGL K EGI+ T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFC 166
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
GT Y+APE D + GVV+ E++ G+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 316 ATMN-FSRENIIGKGGYGNV-YKGMLPNGTEVAVKRFKN---CSKAGDANFKHEVEIIAS 370
TMN F ++GKG +G V G A+K + +K A+ E ++ +
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 371 VKHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI-AL 428
+H L AL+ Y+ T H R+ V + + G L+ HL +++ R R
Sbjct: 62 TRHPFLTALK-YAFQT-----HDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGA 112
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT--RVA 486
L YLH +++RDIK N++LD+ K+ DFGL K EGI+ T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFC 166
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
GT Y+APE D + GVV+ E++ G+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGD-ANFKHEVEIIASVKHVNLVALRGYST 384
+G G +G VYK + +A + + + ++ E++I+AS H N+V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD--- 101
Query: 385 ATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI-RLRIALGTARGLAYLHYGVQP 443
E + I++ + G++ + M +L P+ +I + + L L+Y
Sbjct: 102 -AFYYENNLWILI-EFCAGGAV-----DAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 444 AIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL--YGK 501
IIHRD+KA NIL + K+ DFG++ N I + GT ++APE + K
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-GTPYWMAPEVVMCETSK 213
Query: 502 LTP---GSDVYSFGVVLLEL 518
P +DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 23/215 (10%)
Query: 317 TMN-FSRENIIGKGGYGNV-YKGMLPNGTEVAVKRFKN---CSKAGDANFKHEVEIIASV 371
TMN F ++GKG +G V G A+K K +K A+ E ++ +
Sbjct: 8 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 67
Query: 372 KHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI-ALG 429
+H L AL+ YS T H R+ V + + G L+ HL +++ R R
Sbjct: 68 RHPFLTALK-YSFQT-----HDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAE 118
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT--RVAG 487
L YLH + +++RD+K N++LD+ K+ DFGL K EGI T G
Sbjct: 119 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCG 173
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
T Y+APE D + GVV+ E++ G+
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 316 ATMN-FSRENIIGKGGYGNV-YKGMLPNGTEVAVKRFKN---CSKAGDANFKHEVEIIAS 370
TMN F ++GKG +G V G A+K + +K A+ E ++ +
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 371 VKHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI-AL 428
+H L AL+ Y+ T H R+ V + + G L+ HL +++ R R
Sbjct: 67 TRHPFLTALK-YAFQT-----HDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGA 117
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT--RVA 486
L YLH +++RDIK N++LD+ K+ DFGL K EGI+ T
Sbjct: 118 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFC 171
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
GT Y+APE D + GVV+ E++ G+
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 24/215 (11%)
Query: 317 TMN-FSRENIIGKGGYGNV-YKGMLPNGTEVAVKRFKN---CSKAGDANFKHEVEIIASV 371
TMN F ++GKG +G V G A+K + +K A+ E ++ +
Sbjct: 6 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 65
Query: 372 KHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI-ALG 429
+H L AL+ Y+ T H R+ V + + G L+ HL +++ R R
Sbjct: 66 RHPFLTALK-YAFQT-----HDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAE 116
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT--RVAG 487
L YLH +++RDIK N++LD+ K+ DFGL K EGI+ T G
Sbjct: 117 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCG 170
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
T Y+APE D + GVV+ E++ G+
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 38/240 (15%)
Query: 300 SRSSNLARFKIEEIKAATMNFSR--ENI--IGKGGYGNV---YKGMLPNGTEVAVKR--- 349
SRS F EI +T + +N+ IG G G V Y +L VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSR 59
Query: 350 -FKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL-- 406
F+N + A A E+ ++ V H N++ L T LE Q + + L + +L
Sbjct: 60 PFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 117
Query: 407 -----YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAF 461
DH +++S+ + + G+ +LH IIHRD+K SNI++
Sbjct: 118 VIQMELDH------ERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 462 EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
K+ DFGLA+ G + + T T Y APE L D++S G ++ E++ G
Sbjct: 164 TLKILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 38/240 (15%)
Query: 300 SRSSNLARFKIEEIKAATMNFSR--ENI--IGKGGYGNV---YKGMLPNGTEVAVKR--- 349
SRS F EI +T + +N+ IG G G V Y +L VA+K+
Sbjct: 3 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSR 60
Query: 350 -FKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL-- 406
F+N + A A E+ ++ V H N++ L T LE Q + + L + +L
Sbjct: 61 PFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 118
Query: 407 -----YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAF 461
DH +++S+ + + G+ +LH IIHRD+K SNI++
Sbjct: 119 VIQMELDH------ERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDC 164
Query: 462 EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
K+ DFGLA+ G + + T T Y APE L D++S G ++ E++ G
Sbjct: 165 TLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 14/99 (14%)
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH--LTTRVAGTLG 490
L +LH II+RD+K N+LLD K+ DFG+ K EGI + T GT
Sbjct: 136 ALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPD 189
Query: 491 YVAPEY---ALYGKLTPGSDVYSFGVVLLELLSGKKACE 526
Y+APE LYG P D ++ GV+L E+L G E
Sbjct: 190 YIAPEILQEMLYG---PAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 38/240 (15%)
Query: 300 SRSSNLARFKIEEIKAATMNFSR--ENI--IGKGGYGNV---YKGMLPNGTEVAVKR--- 349
SRS F EI +T + +N+ IG G G V Y +L VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSR 59
Query: 350 -FKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL-- 406
F+N + A A E+ ++ V H N++ L T LE Q + + L + +L
Sbjct: 60 PFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 117
Query: 407 -----YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAF 461
DH +++S+ + + G+ +LH IIHRD+K SNI++
Sbjct: 118 VIQMELDH------ERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 462 EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
K+ DFGLA+ G + + T T Y APE L D++S G ++ E++ G
Sbjct: 164 TLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 316 ATMN-FSRENIIGKGGYGNV-YKGMLPNGTEVAVKRFKN---CSKAGDANFKHEVEIIAS 370
TMN F ++GKG +G V G A+K + +K A+ E ++ +
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 371 VKHVNLVALRGYSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRI-AL 428
+H L AL+ Y+ T H R+ V + + G L+ HL +++ R R
Sbjct: 62 TRHPFLTALK-YAFQT-----HDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGA 112
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT--RVA 486
L YLH +++RDIK N++LD+ K+ DFGL K EGI+ T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFC 166
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
GT Y+APE D + GVV+ E++ G+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 39/236 (16%)
Query: 315 AATMNFSRENI-----IGKGGYGNVYK----GMLPNGT--EVAVKRFKNCSKAGDAN-FK 362
A+ F R+ + +G+G +G V + G+ T VAVK K + +
Sbjct: 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM 78
Query: 363 HEVEIIASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP 421
E++I+ + H+N+V L G T G +++ + G+L +L + + +
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 422 IR--------------LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGD 467
+ + + A+G+ +L IHRD+ A NILL E K+ D
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 468 FGLAK---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
FGLA+ +P+ + R+ L ++APE T SDV+SFGV+L E+ S
Sbjct: 192 FGLARDIYKDPDXVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 38/240 (15%)
Query: 300 SRSSNLARFKIEEIKAATMNFSR--ENI--IGKGGYGNV---YKGMLPNGTEVAVKR--- 349
SRS F EI +T + +N+ IG G G V Y +L VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSR 59
Query: 350 -FKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL-- 406
F+N + A A E+ ++ V H N++ L T LE Q + + L + +L
Sbjct: 60 PFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ 117
Query: 407 -----YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAF 461
DH +++S+ + + G+ +LH IIHRD+K SNI++
Sbjct: 118 VIQMELDH------ERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 462 EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
K+ DFGLA+ G + + T T Y APE L D++S G ++ E++ G
Sbjct: 164 TLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 39/236 (16%)
Query: 315 AATMNFSRENI-----IGKGGYGNVYK----GMLPNGT--EVAVKRFKNCSKAGDAN-FK 362
A+ F R+ + +G+G +G V + G+ T VAVK K + +
Sbjct: 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM 78
Query: 363 HEVEIIASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP 421
E++I+ + H+N+V L G T G +++ + G+L +L + + +
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 422 IR--------------LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGD 467
+ + + A+G+ +L IHRD+ A NILL E K+ D
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 468 FGLAK---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
FGLA+ +P+ + R+ L ++APE T SDV+SFGV+L E+ S
Sbjct: 192 FGLARDIXKDPDXVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 38/240 (15%)
Query: 300 SRSSNLARFKIEEIKAATMNFSR--ENI--IGKGGYGNV---YKGMLPNGTEVAVKR--- 349
SRS F EI +T + +N+ IG G G V Y +L VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSR 59
Query: 350 -FKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL-- 406
F+N + A A E+ ++ V H N++ L T LE Q + + L + +L
Sbjct: 60 PFQNQTHAKRAY--RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ 117
Query: 407 -----YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAF 461
DH +++S+ + + G+ +LH IIHRD+K SNI++
Sbjct: 118 VIQMELDH------ERMSYLLYQMLV-----GIKHLHSA---GIIHRDLKPSNIVVKSDA 163
Query: 462 EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
K+ DFGLA+ G + + T T Y APE L D++S G ++ E++ G
Sbjct: 164 TLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 38/240 (15%)
Query: 300 SRSSNLARFKIEEIKAATMNFSR--ENI--IGKGGYGNV---YKGMLPNGTEVAVKR--- 349
SRS F EI +T + +N+ IG G G V Y +L VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSR 59
Query: 350 -FKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL-- 406
F+N + A A E+ ++ V H N++ L T LE Q + + L + +L
Sbjct: 60 PFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ 117
Query: 407 -----YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAF 461
DH +++S+ + + G+ +LH IIHRD+K SNI++
Sbjct: 118 VIQMELDH------ERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDA 163
Query: 462 EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
K+ DFGLA+ G + + T T Y APE L D++S G ++ E++ G
Sbjct: 164 TLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 21/231 (9%)
Query: 299 ESRSSNLARFKIEEIKAATM---NFSRENIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCS 354
E + L F ++ K + +F + + +G G G V+K P+G +A K
Sbjct: 11 EQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI 70
Query: 355 KAGDAN-FKHEVEIIASVKHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLF 411
K N E++++ +V G YS + I + + GSL L
Sbjct: 71 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-------ICMEHMDGGSLDQVLK 123
Query: 412 GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLA 471
+G ++ I ++++ +GL YL + I+HRD+K SNIL++ E K+ DFG++
Sbjct: 124 KAG--RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
Query: 472 KFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
+ I + GT Y++PE + SD++S G+ L+E+ G+
Sbjct: 180 G---QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---FNPEGITHLTTRVA 486
ARG+ +L IHRD+ A NILL E K+ DFGLA+ NP+ + TR+
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
L ++APE + SDV+S+GV+L E+ S
Sbjct: 265 --LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 21/231 (9%)
Query: 299 ESRSSNLARFKIEEIKAATM---NFSRENIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCS 354
E + L F ++ K + +F + + +G G G V+K P+G +A K
Sbjct: 46 EQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI 105
Query: 355 KAGDAN-FKHEVEIIASVKHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLF 411
K N E++++ +V G YS + I + + GSL L
Sbjct: 106 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-------ICMEHMDGGSLDQVLK 158
Query: 412 GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLA 471
+G ++ I ++++ +GL YL + I+HRD+K SNIL++ E K+ DFG++
Sbjct: 159 KAG--RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
Query: 472 KFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
+ I + GT Y++PE + SD++S G+ L+E+ G+
Sbjct: 215 G---QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 319 NFSRENIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCSKAGDAN-FKHEVEIIASVKHVNL 376
+F + + +G G G V+K P+G +A K K N E++++ +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 377 VALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
V G YS + I + + GSL L +G ++ I ++++ +GL
Sbjct: 70 VGFYGAFYSDGEIS-------ICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGL 120
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YL + I+HRD+K SNIL++ E K+ DFG++ + I + GT Y++P
Sbjct: 121 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDEMANEFVGTRSYMSP 175
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSGK 522
E + SD++S G+ L+E+ G+
Sbjct: 176 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 37/234 (15%)
Query: 315 AATMNFSRENI-----IGKGGYGNVYK----GMLPNGTE--VAVKRFKNCSKAGDAN-FK 362
A+ F R+ + +G+G +G V + G+ T VAVK K + +
Sbjct: 21 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALM 80
Query: 363 HEVEIIASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP 421
E++I+ + H+N+V L G T G +++ + G+L +L + + +
Sbjct: 81 SELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 422 IR------------LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFG 469
+ + A+G+ +L IHRD+ A NILL E K+ DFG
Sbjct: 137 PEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFG 193
Query: 470 LAK---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
LA+ +P+ + R+ L ++APE T SDV+SFGV+L E+ S
Sbjct: 194 LARDIXKDPDXVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N+++
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAY--RELVLMKXVNHKNIIS 87
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSLYDHL-FGSGMKKLSWPIRLRIALGTARGLAYL 437
L T LE Q + + L + +L + +++S+ + G+ +L
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLYQMLXGIKHL 142
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYA 497
H IIHRD+K SNI++ K+ DFGLA+ G + + T T Y APE
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 498 LYGKLTPGSDVYSFGVVLLELLSGK 522
L D++S G ++ E++ K
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 39/236 (16%)
Query: 315 AATMNFSRENI-----IGKGGYGNVYK----GMLPNGT--EVAVKRFKNCSKAGDAN-FK 362
A+ F R+ + +G+G +G V + G+ T VAVK K + +
Sbjct: 10 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM 69
Query: 363 HEVEIIASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP 421
E++I+ + H+N+V L G T G +++ + G+L +L + + +
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKP----GGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 422 IR--------------LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGD 467
+ + + A+G+ +L IHRD+ A NILL E K+ D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 468 FGLAK---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
FGLA+ +P+ + R+ L ++APE T SDV+SFGV+L E+ S
Sbjct: 183 FGLARDIXKDPDXVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N+++
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVNHKNIIS 80
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSLYDHL-FGSGMKKLSWPIRLRIALGTARGLAYL 437
L T LE Q + + L + +L + +++S+ + G+ +L
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLYQMLXGIKHL 135
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYA 497
H IIHRD+K SNI++ K+ DFGLA+ G + + T T Y APE
Sbjct: 136 HSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVI 190
Query: 498 LYGKLTPGSDVYSFGVVLLELLSGK 522
L D++S G ++ E++ K
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 39/236 (16%)
Query: 315 AATMNFSRENI-----IGKGGYGNVYK----GMLPNGT--EVAVKRFKNCSKAGDAN-FK 362
A+ F R+ + +G+G +G V + G+ T VAVK K + +
Sbjct: 10 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM 69
Query: 363 HEVEIIASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP 421
E++I+ + H+N+V L G T G +++ + G+L +L + + +
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 422 IR--------------LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGD 467
+ + + A+G+ +L IHRD+ A NILL E K+ D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 468 FGLAK---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
FGLA+ +P+ + R+ L ++APE T SDV+SFGV+L E+ S
Sbjct: 183 FGLARDIXKDPDXVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 320 FSRENIIGKGGYGNVY--KGMLPNGTEVAVKRFKNCSKAGDANFK--HEVEIIASVKHVN 375
+ R +G G YG V + + + E A+K + S + +N K EV ++ + H N
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTH-VERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPN 97
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGS-GMKKLSWPIRLRIALGTARGL 434
++ L + + +V + G L+D + ++ + ++ L G+
Sbjct: 98 IMKLYDFFE-----DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLS---GV 149
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPEGITHLTTRVAGTLGY 491
YLH + I+HRD+K N+LL+ + K+ DFGL+ E + R+ GT Y
Sbjct: 150 TYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV-FENQKKMKERL-GTAYY 204
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
+APE L K DV+S GV+L LL+G
Sbjct: 205 IAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N+++
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIS 87
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSLYDHL-FGSGMKKLSWPIRLRIALGTARGLAYL 437
L T LE Q + + L + +L + +++S+ + G+ +L
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-----LLYQMLXGIKHL 142
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYA 497
H IIHRD+K SNI++ K+ DFGLA+ G + + T T Y APE
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 498 LYGKLTPGSDVYSFGVVLLELLSGK 522
L D++S G ++ E++ K
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 38/240 (15%)
Query: 300 SRSSNLARFKIEEIKAATMNFSR--ENI--IGKGGYGNV---YKGMLPNGTEVAVKR--- 349
SRS F EI +T + +N+ IG G G V Y +L VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSR 59
Query: 350 -FKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL-- 406
F+N + A A E+ ++ V H N++ L T LE Q + + L + +L
Sbjct: 60 PFQNQTHAKRAY--RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ 117
Query: 407 -----YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAF 461
DH +++S+ + + G+ +LH IIHRD+K SNI++
Sbjct: 118 VIQMELDH------ERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDA 163
Query: 462 EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
K+ DFGLA+ G + + T T Y APE L D++S G ++ E++ G
Sbjct: 164 TLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 35/232 (15%)
Query: 315 AATMNFSRENI-----IGKGGYGNVYK----GMLPNGTE--VAVKRFKNCSKAGDAN-FK 362
A+ F R+ + +G+G +G V + G+ T VAVK K + +
Sbjct: 19 ASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALM 78
Query: 363 HEVEIIASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHL---------FG 412
E++I+ + H+N+V L G T G +++ + G+L +L +
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 413 SGMKK-LSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLA 471
K L+ + + A+G+ +L IHRD+ A NILL E K+ DFGLA
Sbjct: 135 DLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLA 191
Query: 472 K---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ +P+ + R+ L ++APE T SDV+SFGV+L E+ S
Sbjct: 192 RDIYKDPDYVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 33/235 (14%)
Query: 288 VTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAV 347
V D +P L+L+S KI E + +RE +G +VAV
Sbjct: 37 VVDQGDPRLLLDSY------VKIGEGSTGIVCLAREK---------------HSGRQVAV 75
Query: 348 KRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLY 407
K + +EV I+ +H N+V + Y + V G + ++ + L G+L
Sbjct: 76 KMMDLRKQQRRELLFNEVVIMRDYQHFNVVEM--YKSYLV---GEELWVLMEFLQGGALT 130
Query: 408 DHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGD 467
D + +L+ + + LAYLH +IHRDIK+ +ILL K+ D
Sbjct: 131 DIV---SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSD 184
Query: 468 FGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
FG + + + GT ++APE D++S G++++E++ G+
Sbjct: 185 FGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 38/235 (16%)
Query: 315 AATMNFSRENI-----IGKGGYGNVYK----GMLPNGT--EVAVKRFKNCSKAGDAN-FK 362
A+ F R+ + +G+G +G V + G+ T VAVK K + +
Sbjct: 20 ASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM 79
Query: 363 HEVEIIASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP 421
E++I+ + H+N+V L G T G +++ + G+L +L + + +
Sbjct: 80 SELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 135
Query: 422 IRLRI-------------ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDF 468
+ + A+G+ +L IHRD+ A NILL E K+ DF
Sbjct: 136 TPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDF 192
Query: 469 GLAK---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
GLA+ +P+ + R+ L ++APE T SDV+SFGV+L E+ S
Sbjct: 193 GLARDIXKDPDXVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 309 KIEEIKAATMNFSRENIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCSKAGDAN-FKHEVE 366
K+ E+K +F + + +G G G V+K P+G +A K K N E++
Sbjct: 18 KVGELKDD--DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 75
Query: 367 IIASVKHVNLVALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRL 424
++ +V G YS + I + + GSL L +G ++ I
Sbjct: 76 VLHECNSPYIVGFYGAFYSDGEIS-------ICMEHMDGGSLDQVLKKAG--RIPEQILG 126
Query: 425 RIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR 484
++++ +GL YL + I+HRD+K SNIL++ E K+ DFG++ + I +
Sbjct: 127 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANS 181
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
GT Y++PE + SD++S G+ L+E+ G+
Sbjct: 182 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 319 NFSRENIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCSKAGDAN-FKHEVEIIASVKHVNL 376
+F + + +G G G V+K P+G +A K K N E++++ +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 377 VALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
V G YS + I + + GSL L +G ++ I ++++ +GL
Sbjct: 67 VGFYGAFYSDGEIS-------ICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGL 117
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YL + I+HRD+K SNIL++ E K+ DFG++ + I + GT Y++P
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFVGTRSYMSP 172
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSGK 522
E + SD++S G+ L+E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 319 NFSRENIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCSKAGDAN-FKHEVEIIASVKHVNL 376
+F + + +G G G V+K P+G +A K K N E++++ +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 377 VALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
V G YS + I + + GSL L +G ++ I ++++ +GL
Sbjct: 67 VGFYGAFYSDGEIS-------ICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGL 117
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YL + I+HRD+K SNIL++ E K+ DFG++ + I + GT Y++P
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFVGTRSYMSP 172
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSGK 522
E + SD++S G+ L+E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 39/236 (16%)
Query: 315 AATMNFSRENI-----IGKGGYGNVYK----GMLPNGT--EVAVKRFKNCSKAGDAN-FK 362
A+ F R+ + +G+G +G V + G+ T VAVK K + +
Sbjct: 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM 78
Query: 363 HEVEIIASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP 421
E++I+ + H+N+V L G T G +++ + G+L +L + + +
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 422 IR--------------LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGD 467
+ + + A+G+ +L IHRD+ A NILL E K+ D
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 468 FGLAK---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
FGLA+ +P+ + R+ L ++APE T SDV+SFGV+L E+ S
Sbjct: 192 FGLARDIYKDPDYVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 39/236 (16%)
Query: 315 AATMNFSRENI-----IGKGGYGNVYK----GMLPNGT--EVAVKRFKNCSKAGDAN-FK 362
A+ F R+ + +G+G +G V + G+ T VAVK K + +
Sbjct: 10 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM 69
Query: 363 HEVEIIASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP 421
E++I+ + H+N+V L G T G +++ + G+L +L + + +
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKP----GGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 422 IR--------------LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGD 467
+ + + A+G+ +L IHRD+ A NILL E K+ D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 468 FGLAK---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
FGLA+ +P+ + R+ L ++APE T SDV+SFGV+L E+ S
Sbjct: 183 FGLARDIYKDPDYVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYST 384
+G G +G VYK G A K + S+ ++ E+EI+A+ H +V L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 385 ATVPLEGHQRIIV--CDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
+G I++ C G D + + L+ P + L +LH
Sbjct: 87 H----DGKLWIMIEFC----PGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---S 135
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL--YG 500
IIHRD+KA N+L+ + ++ DFG++ N + + + + GT ++APE +
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETM 194
Query: 501 KLTP---GSDVYSFGVVLLEL 518
K TP +D++S G+ L+E+
Sbjct: 195 KDTPYDYKADIWSLGITLIEM 215
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 319 NFSRENIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCSKAGDAN-FKHEVEIIASVKHVNL 376
+F + + +G G G V+K P+G +A K K N E++++ +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 377 VALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
V G YS + I + + GSL L +G ++ I ++++ +GL
Sbjct: 67 VGFYGAFYSDGEIS-------ICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGL 117
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YL + I+HRD+K SNIL++ E K+ DFG++ + I + GT Y++P
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFVGTRSYMSP 172
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSGK 522
E + SD++S G+ L+E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 35/232 (15%)
Query: 315 AATMNFSRENI-----IGKGGYGNVYK----GMLPNGTE--VAVKRFKNCSKAGDAN-FK 362
A+ F R+ + +G+G +G V + G+ T VAVK K + +
Sbjct: 19 ASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALM 78
Query: 363 HEVEIIASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP 421
E++I+ + H+N+V L G T G +++ + G+L +L + + +
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 422 IRLR----------IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLA 471
+ + A+G+ +L IHRD+ A NILL E K+ DFGLA
Sbjct: 135 DLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLA 191
Query: 472 K---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ +P+ + R+ L ++APE T SDV+SFGV+L E+ S
Sbjct: 192 RDIYKDPDYVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYST 384
+G G +G VYK G A K + S+ ++ E+EI+A+ H +V L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 385 ATVPLEGHQRIIV--CDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
+G I++ C G D + + L+ P + L +LH
Sbjct: 79 H----DGKLWIMIEFC----PGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---S 127
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL--YG 500
IIHRD+KA N+L+ + ++ DFG++ N + + + + GT ++APE +
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETM 186
Query: 501 KLTP---GSDVYSFGVVLLEL 518
K TP +D++S G+ L+E+
Sbjct: 187 KDTPYDYKADIWSLGITLIEM 207
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF--NPEGITHLTTRVAGTLG 490
G+ YL + +HRD+ A N+LL AK+ DFGL+K E T +
Sbjct: 139 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSV 533
+ APE Y K + SDV+SFGV++ E S G+K ++G V
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF--NPEGITHLTTRVAGTLG 490
G+ YL + +HRD+ A N+LL AK+ DFGL+K E T +
Sbjct: 139 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSV 533
+ APE Y K + SDV+SFGV++ E S G+K ++G V
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF--NPEGITHLTTRVAGTLG 490
G+ YL + +HRD+ A N+LL AK+ DFGL+K E T +
Sbjct: 119 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 175
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSV 533
+ APE Y K + SDV+SFGV++ E S G+K ++G V
Sbjct: 176 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 219
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
+GKG + V + M +P G E A K K S + E I +KH N+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD- 70
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
++ EG +V DL+ G L++ + + + + L +++
Sbjct: 71 ---SISEEGFH-YLVFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILESVNHCHL 121
Query: 443 PAIIHRDIKASNILL---DEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALY 499
I+HRD+K N+LL + K+ DFGLA +G AGT GY++PE
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 500 GKLTPGSDVYSFGVVLLELLSG 521
D+++ GV+L LL G
Sbjct: 181 DPYGKPVDMWACGVILYILLVG 202
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF--NPEGITHLTTRVAGTLG 490
G+ YL + +HRD+ A N+LL AK+ DFGL+K E T +
Sbjct: 123 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 179
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSV 533
+ APE Y K + SDV+SFGV++ E S G+K ++G V
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF--NPEGITHLTTRVAGTLG 490
G+ YL + +HRD+ A N+LL AK+ DFGL+K E T +
Sbjct: 123 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVK 179
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSV 533
+ APE Y K + SDV+SFGV++ E S G+K ++G V
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 39/236 (16%)
Query: 315 AATMNFSRENI-----IGKGGYGNVYK----GMLPNGT--EVAVKRFKNCSKAGDAN-FK 362
A+ F R+ + +G+G +G V + G+ T VAVK K + +
Sbjct: 10 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM 69
Query: 363 HEVEIIASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP 421
E++I+ + H+N+V L G T G +++ + G+L +L + + +
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKP----GGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 422 IR--------------LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGD 467
+ + + A+G+ +L IHRD+ A NILL E K+ D
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 468 FGLAK---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
FGLA+ +P+ + R+ L ++APE T SDV+SFGV+L E+ S
Sbjct: 183 FGLARDIYKDPDYVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 319 NFSRENIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCSKAGDAN-FKHEVEIIASVKHVNL 376
+F + + +G G G V+K P+G +A K K N E++++ +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 377 VALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
V G YS + I + + GSL L +G ++ I ++++ +GL
Sbjct: 67 VGFYGAFYSDGEIS-------ICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGL 117
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YL + I+HRD+K SNIL++ E K+ DFG++ + I + GT Y++P
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFVGTRSYMSP 172
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSGK 522
E + SD++S G+ L+E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 22/205 (10%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N+++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY--RELVLMKXVNHKNIIS 87
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSLYDHL-FGSGMKKLSWPIRLRIALGTARGLAYL 437
L T LE Q + + L + +L + +++S+ + + G+ +L
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLC-----GIKHL 142
Query: 438 HYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYA 497
H IIHRD+K SNI++ K+ DFGLA+ G + + T T Y APE
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 498 LYGKLTPGSDVYSFGVVLLELLSGK 522
L D++S G ++ E++ K
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF--NPEGITHLTTRVAGTLG 490
G+ YL + +HRD+ A N+LL AK+ DFGL+K E T +
Sbjct: 129 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 185
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSV 533
+ APE Y K + SDV+SFGV++ E S G+K ++G V
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 229
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF--NPEGITHLTTRVAGTLG 490
G+ YL + +HRD+ A N+LL AK+ DFGL+K E T +
Sbjct: 117 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 173
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSV 533
+ APE Y K + SDV+SFGV++ E S G+K ++G V
Sbjct: 174 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 217
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF--NPEGITHLTTRVAGTLG 490
G+ YL + +HRD+ A N+LL AK+ DFGL+K E T +
Sbjct: 137 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 193
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSV 533
+ APE Y K + SDV+SFGV++ E S G+K ++G V
Sbjct: 194 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 34/211 (16%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N+++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAY--RELVLMKXVNHKNIIS 87
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSL-------YDHLFGSGMKKLSWPIRLRIALGTA 431
L T LE Q + + L + +L DH +++S+ + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH------ERMSYLLYQMLC---- 137
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
G+ +LH IIHRD+K SNI++ K+ DFGLA+ G + + T T Y
Sbjct: 138 -GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
APE L D++S G ++ E++ K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
+GKG + V + M +P G E A K K S + E I +KH N+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD- 70
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
++ EG +V DL+ G L++ + + + + L +++
Sbjct: 71 ---SISEEGFH-YLVFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILESVNHCHL 121
Query: 443 PAIIHRDIKASNILL---DEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALY 499
I+HRD+K N+LL + K+ DFGLA +G AGT GY++PE
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 500 GKLTPGSDVYSFGVVLLELLSG 521
D+++ GV+L LL G
Sbjct: 181 DPYGKPVDMWACGVILYILLVG 202
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 319 NFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHV---- 374
+F +IG+G Y V L + R K N +++ + + KHV
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMR---VVKKELVNDDEDIDWVQTEKHVFEQA 109
Query: 375 -NLVALRGYSTATVPLEGHQRII-VCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR 432
N L G + + R+ V + ++ G L H+ +KL + +
Sbjct: 110 SNHPFLVGLHSC---FQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISL 164
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT--HLTTRVAGTLG 490
L YLH + II+RD+K N+LLD K+ D+G+ K EG+ T+ GT
Sbjct: 165 ALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSTFCGTPN 218
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEII 528
Y+APE D ++ GV++ E+++G+ +I+
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRF-KNCSKAGDANFKHEVEI--IASVKHV 374
N+ +G+G +G V G +VA+K K D + E EI + ++H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
+++ L Y ++ II+ L+D++ K+S R +
Sbjct: 65 HIIKL--YDV----IKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAV 116
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
Y H + I+HRD+K N+LLDE K+ DFGL+ +G + G+ Y AP
Sbjct: 117 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSCGSPNYAAP 171
Query: 495 EYALYGKL--TPGSDVYSFGVVLLELL 519
E + GKL P DV+S GV+L +L
Sbjct: 172 E-VISGKLYAGPEVDVWSCGVILYVML 197
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + EV I+ V H N++ L Y T +++ +L+ G
Sbjct: 47 KRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT------DVVLILELVSGG 100
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + LS G+ YLH I H D+K NI LLD+
Sbjct: 101 ELFD--FLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPI 155
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA +G+ + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 156 PHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 521 G 521
G
Sbjct: 214 G 214
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 319 NFSRENIIGKGGYGNVYK-GMLPNGTEVAVKRFKNCSKAGDAN-FKHEVEIIASVKHVNL 376
+F + + +G G G V+K P+G +A K K N E++++ +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 377 VALRG--YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
V G YS + I + + GSL L +G ++ I ++++ +GL
Sbjct: 67 VGFYGAFYSDGEIS-------ICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGL 117
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YL + I+HRD+K SNIL++ E K+ DFG++ + I + GT Y++P
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLIDSMANSFVGTRSYMSP 172
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSGK 522
E + SD++S G+ L+E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRF-KNCSKAGDANFKHEVEI--IASVKHV 374
N+ +G+G +G V G +VA+K K D + E EI + ++H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
+++ L Y ++ II+ L+D++ K+S R +
Sbjct: 75 HIIKL--YDV----IKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAV 126
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
Y H + I+HRD+K N+LLDE K+ DFGL+ +G + G+ Y AP
Sbjct: 127 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSCGSPNYAAP 181
Query: 495 EYALYGKL--TPGSDVYSFGVVLLELL 519
E + GKL P DV+S GV+L +L
Sbjct: 182 E-VISGKLYAGPEVDVWSCGVILYVML 207
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 39/236 (16%)
Query: 315 AATMNFSRENI-----IGKGGYGNVYK----GMLPNGT--EVAVKRFKNCSKAGDAN-FK 362
A+ F R+ + +G+G +G V + G+ T VAVK K + +
Sbjct: 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM 115
Query: 363 HEVEIIASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP 421
E++I+ + H+N+V L G T G +++ + G+L +L + + +
Sbjct: 116 SELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 171
Query: 422 IR--------------LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGD 467
+ + + A+G+ +L IHRD+ A NILL E K+ D
Sbjct: 172 VAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 228
Query: 468 FGLAK---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
FGLA+ +P+ + R+ L ++APE T SDV+SFGV+L E+ S
Sbjct: 229 FGLARDIYKDPDYVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 16/215 (7%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVK--RFKNCSKAGDANFKHEVEII---A 369
AT + IG G YG VYK P+ G VA+K R N + + EV ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 370 SVKHVNLVALRGY-STATVPLEGHQRIIVCDLLHNGSLY-DHLFGSGMKKLSWPIRLRIA 427
+ +H N+V L +T+ E ++ + + Y D G+ + +R
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 428 LGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG 487
L RGL +LH I+HRD+K NIL+ K+ DFGLA+ + V
Sbjct: 122 L---RGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-- 173
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
TL Y APE L D++S G + E+ K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRF-KNCSKAGDANFKHEVEI--IASVKHV 374
N+ +G+G +G V G +VA+K K D + E EI + ++H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
+++ L Y ++ II+ L+D++ K+S R +
Sbjct: 74 HIIKL--YDV----IKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAV 125
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
Y H + I+HRD+K N+LLDE K+ DFGL+ +G + G+ Y AP
Sbjct: 126 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSCGSPNYAAP 180
Query: 495 EYALYGKL--TPGSDVYSFGVVLLELL 519
E + GKL P DV+S GV+L +L
Sbjct: 181 E-VISGKLYAGPEVDVWSCGVILYVML 206
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L + ++ + + L + S + + P+ +GLA
Sbjct: 67 IVKLLDV------IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAP 494
+ H ++HRD+K N+L++ K+ DFGLA+ F T+ V TL Y AP
Sbjct: 121 FCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 495 EYALYGK-LTPGSDVYSFGVVLLELLSGK 522
E L K + D++S G + E+++ +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L V ++ +V + L + L + S + + P+ +GLA
Sbjct: 65 IVKL-----LDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 119 FCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRF-KNCSKAGDANFKHEVEI--IASVKHV 374
N+ +G+G +G V G +VA+K K D + E EI + ++H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
+++ L Y ++ II+ L+D++ K+S R +
Sbjct: 69 HIIKL--YDV----IKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAV 120
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
Y H + I+HRD+K N+LLDE K+ DFGL+ +G + G+ Y AP
Sbjct: 121 EYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSCGSPNYAAP 175
Query: 495 EYALYGKL--TPGSDVYSFGVVLLELL 519
E + GKL P DV+S GV+L +L
Sbjct: 176 E-VISGKLYAGPEVDVWSCGVILYVML 201
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 16/215 (7%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVK--RFKNCSKAGDANFKHEVEII---A 369
AT + IG G YG VYK P+ G VA+K R N + + EV ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 370 SVKHVNLVALRGY-STATVPLEGHQRIIVCDLLHNGSLY-DHLFGSGMKKLSWPIRLRIA 427
+ +H N+V L +T+ E ++ + + Y D G+ + +R
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 428 LGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG 487
L RGL +LH I+HRD+K NIL+ K+ DFGLA+ + V
Sbjct: 122 L---RGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LAPVVV 173
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
TL Y APE L D++S G + E+ K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 84/201 (41%), Gaps = 13/201 (6%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKR---FKNCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
IG G YG K + ++ V + + + ++A EV ++ +KH N+V Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR---Y 70
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKK---LSWPIRLRIALGTARGLAYLHY 439
+ IV + G L + G K+ L LR+ L H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 440 GVQPA--IIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYA 497
++HRD+K +N+ LD K+GDFGLA+ + T V GT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQM 188
Query: 498 LYGKLTPGSDVYSFGVVLLEL 518
SD++S G +L EL
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 105/240 (43%), Gaps = 38/240 (15%)
Query: 300 SRSSNLARFKIEEIKAATMNFSR--ENI--IGKGGYGNV---YKGMLPNGTEVAVKR--- 349
SRS F EI +T + +N+ IG G G V Y +L VA+K+
Sbjct: 4 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSR 61
Query: 350 -FKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL-- 406
F+N + A A E+ ++ V H N++ L T LE Q + + L + +L
Sbjct: 62 PFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 119
Query: 407 -----YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAF 461
DH +++S+ + + G+ +LH IIHRD+K SNI++
Sbjct: 120 VIQMELDH------ERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDC 165
Query: 462 EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
K+ DFGLA+ G + + T Y APE L D++S G ++ E++ G
Sbjct: 166 TLKILDFGLAR--TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 28/211 (13%)
Query: 320 FSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANF-KHEVEIIASVKHVNLVA 378
F E+ +G+G VY+ GT+ K K D + E+ ++ + H N++
Sbjct: 55 FEVESELGRGATSIVYRCK-QKGTQKPYA-LKVLKKTVDKKIVRTEIGVLLRLSHPNIIK 112
Query: 379 LRG-YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR----G 433
L+ + T T + +V +L+ G L+D + G R A +
Sbjct: 113 LKEIFETPT------EISLVLELVTGGELFDRIVEKGY------YSERDAADAVKQILEA 160
Query: 434 LAYLHYGVQPAIIHRDIKASNILL-DEAFEA--KVGDFGLAKFNPEGITHLTTRVAGTLG 490
+AYLH + I+HRD+K N+L A +A K+ DFGL+K + L V GT G
Sbjct: 161 VAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV--LMKTVCGTPG 215
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
Y APE P D++S G++ LL G
Sbjct: 216 YCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 34/211 (16%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N+++
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIS 88
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSL-------YDHLFGSGMKKLSWPIRLRIALGTA 431
L T LE Q + + L + +L DH +++S+ + +
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH------ERMSYLLYQMLC---- 138
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
G+ +LH IIHRD+K SNI++ K+ DFGLA+ G + + T T Y
Sbjct: 139 -GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 192
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
APE L D++S G ++ E++ K
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 16/215 (7%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVK--RFKNCSKAGDANFKHEVEII---A 369
AT + IG G YG VYK P+ G VA+K R N + + EV ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 370 SVKHVNLVALRGY-STATVPLEGHQRIIVCDLLHNGSLY-DHLFGSGMKKLSWPIRLRIA 427
+ +H N+V L +T+ E ++ + + Y D G+ + +R
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 428 LGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG 487
L RGL +LH I+HRD+K NIL+ K+ DFGLA+ + V
Sbjct: 122 L---RGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LDPVVV 173
Query: 488 TLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
TL Y APE L D++S G + E+ K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 30/228 (13%)
Query: 310 IEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEV----AVKRFKNCSKAGDANFKHEV 365
++E++ +F +IG+G +G V + N + + +++ +A A F+ E
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 125
Query: 366 EIIASVKHVNLVALRGYSTATVPLEGHQRIIV-----CDLLHNGSLYDHLFGSGMKKLSW 420
+++ + + AL Y+ E H +++ DLL S ++ M + +
Sbjct: 126 DVLVNGDCQWITALH-YAFQD---ENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF-Y 180
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFG-LAKFNPEGIT 479
+ +A+ + L Y +HRDIK N+LLD ++ DFG K N +G
Sbjct: 181 IGEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV 231
Query: 480 HLTTRVAGTLGYVAPEYAL-----YGKLTPGSDVYSFGVVLLELLSGK 522
+ V GT Y++PE GK P D +S GV + E+L G+
Sbjct: 232 QSSVAV-GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 34/211 (16%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N+++
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIS 87
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSL-------YDHLFGSGMKKLSWPIRLRIALGTA 431
L T LE Q + + L + +L DH +++S+ + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH------ERMSYLLYQMLC---- 137
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
G+ +LH IIHRD+K SNI++ K+ DFGLA+ G + + T T Y
Sbjct: 138 -GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
APE L D++S G ++ E++ K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 92/212 (43%), Gaps = 39/212 (18%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFK----HEVEIIASVKHVNLVALR 380
IG+G YG V+K G VA+K+F D K E+ ++ +KH NLV L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKF--LESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 381 GYSTATVPLEGHQRIIVCD--LLHNGSLY-----DHLFGSGMKKLSWPIRLRIALGTARG 433
L H CD +LH Y +HL +K ++W T +
Sbjct: 69 EVFRRKRRL--HLVFEYCDHTVLHELDRYQRGVPEHL----VKSITW--------QTLQA 114
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVA 493
+ + H + IHRD+K NIL+ + K+ DFG A+ + VA T Y +
Sbjct: 115 VNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRS 170
Query: 494 PEYAL----YGKLTPGSDVYSFGVVLLELLSG 521
PE + YG P DV++ G V ELLSG
Sbjct: 171 PELLVGDTQYG---PPVDVWAIGCVFAELLSG 199
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 34/211 (16%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N+++
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIS 87
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSL-------YDHLFGSGMKKLSWPIRLRIALGTA 431
L T LE Q + + L + +L DH +++S+ + +
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH------ERMSYLLYQMLC---- 137
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
G+ +LH IIHRD+K SNI++ K+ DFGLA+ G + + T T Y
Sbjct: 138 -GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
APE L D++S G ++ E++ K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 45/237 (18%)
Query: 320 FSREN-----IIGKGGYGNVYK----GMLPNGT--EVAVKRFKNCSKAGDAN-FKHEVEI 367
F REN ++G G +G V G+ G +VAVK K + + + E+++
Sbjct: 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 101
Query: 368 IASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG-------------- 412
+ + H N+V L G T + P+ ++ + G L ++L
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPI-----YLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN 156
Query: 413 -------SGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKV 465
+ L++ L A A+G+ +L + + +HRD+ A N+L+ K+
Sbjct: 157 QKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKI 213
Query: 466 GDFGLAKFNPEGITHLTTRVAGTL--GYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
DFGLA+ + ++ R L ++APE G T SDV+S+G++L E+ S
Sbjct: 214 CDFGLAR-DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 34/211 (16%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N+++
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVNHKNIIS 81
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSL-------YDHLFGSGMKKLSWPIRLRIALGTA 431
L T LE Q + + L + +L DH +++S+ + +
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH------ERMSYLLYQMLC---- 131
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
G+ +LH IIHRD+K SNI++ K+ DFGLA+ G + + T T Y
Sbjct: 132 -GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 185
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
APE L D++S G ++ E++ K
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 34/211 (16%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N+++
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIS 86
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSL-------YDHLFGSGMKKLSWPIRLRIALGTA 431
L T LE Q + + L + +L DH +++S+ + +
Sbjct: 87 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH------ERMSYLLYQMLC---- 136
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
G+ +LH IIHRD+K SNI++ K+ DFGLA+ G + + T T Y
Sbjct: 137 -GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 190
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
APE L D++S G ++ E++ K
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 34/211 (16%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N+++
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIS 80
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSL-------YDHLFGSGMKKLSWPIRLRIALGTA 431
L T LE Q + + L + +L DH +++S+ + +
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH------ERMSYLLYQMLC---- 130
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
G+ +LH IIHRD+K SNI++ K+ DFGLA+ G + + T T Y
Sbjct: 131 -GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 184
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
APE L D++S G ++ E++ K
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 34/211 (16%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N+++
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVNHKNIIS 125
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSL-------YDHLFGSGMKKLSWPIRLRIALGTA 431
L T LE Q + + L + +L DH +++S+ + +
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH------ERMSYLLYQMLC---- 175
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
G+ +LH IIHRD+K SNI++ K+ DFGLA+ G + + T T Y
Sbjct: 176 -GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 229
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
APE L D++S G ++ E++ K
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 34/211 (16%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N+++
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIS 88
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSL-------YDHLFGSGMKKLSWPIRLRIALGTA 431
L T LE Q + + L + +L DH +++S+ + +
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH------ERMSYLLYQMLC---- 138
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
G+ +LH IIHRD+K SNI++ K+ DFGLA+ G + + T T Y
Sbjct: 139 -GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 192
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
APE L D++S G ++ E++ K
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 314 KAATMNFSRENIIGKGGYGNVYKGMLPNGTEV----AVKRFKNCSKAGDA----NFKHEV 365
K NF ++G G YG V+ +G + A+K K + A + + E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 366 EIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLR 425
+++ ++ + Y+ T + ++ D ++ G L+ HL ++ ++
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTET----KLHLILDYINGGELFTHL---SQRERFTEHEVQ 162
Query: 426 IALGT-ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR 484
I +G L +LH + II+RDIK NILLD + DFGL+K T
Sbjct: 163 IYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD 219
Query: 485 VAGTLGYVAPEYALYGK--LTPGSDVYSFGVVLLELLSG 521
GT+ Y+AP+ G D +S GV++ ELL+G
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 20/214 (9%)
Query: 326 IGKGGYGNVYKGMLP-NGTEVAVKRFKNC--SKAGDANFKHEVEIIASVKHVNLVALRGY 382
+G G YG+V + +G +VA+K+ S+ E+ ++ ++H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
T L + L + G+K I+ + +GL Y+H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIM---GLKFSEEKIQY-LVYQMLKGLKYIHSA-- 145
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAKF-NPEGITHLTTRVAGTLGYVAPEYAL-YG 500
++HRD+K N+ ++E E K+ DFGLA+ + E ++ TR Y APE L +
Sbjct: 146 -GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWM 199
Query: 501 KLTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
D++S G ++ E+L+GK + +GK L
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGKT---LFKGKDYL 230
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 34/211 (16%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N+++
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIS 81
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSL-------YDHLFGSGMKKLSWPIRLRIALGTA 431
L T LE Q + + L + +L DH +++S+ + +
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH------ERMSYLLYQMLC---- 131
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
G+ +LH IIHRD+K SNI++ K+ DFGLA+ G + + T T Y
Sbjct: 132 -GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 185
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
APE L D++S G ++ E++ K
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF--NPEGITHLTTRVAGTLG 490
G+ YL + +HRD+ A N+LL AK+ DFGL+K E T +
Sbjct: 481 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 537
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSV 533
+ APE Y K + SDV+SFGV++ E S G+K ++G V
Sbjct: 538 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 30/228 (13%)
Query: 310 IEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEV----AVKRFKNCSKAGDANFKHEV 365
++E++ +F +IG+G +G V + N + + +++ +A A F+ E
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 141
Query: 366 EIIASVKHVNLVALRGYSTATVPLEGHQRIIV-----CDLLHNGSLYDHLFGSGMKKLSW 420
+++ + + AL Y+ E H +++ DLL S ++ M + +
Sbjct: 142 DVLVNGDCQWITALH-YAFQD---ENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF-Y 196
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFG-LAKFNPEGIT 479
+ +A+ + L Y +HRDIK N+LLD ++ DFG K N +G
Sbjct: 197 IGEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV 247
Query: 480 HLTTRVAGTLGYVAPEYAL-----YGKLTPGSDVYSFGVVLLELLSGK 522
+ V GT Y++PE GK P D +S GV + E+L G+
Sbjct: 248 QSSVAV-GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + EV I+ V H N++ L Y T +++ +L+ G
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT------DVVLILELVSGG 100
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + LS G+ YLH I H D+K NI LLD+
Sbjct: 101 ELFD--FLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPI 155
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA +G+ + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 156 PHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 521 G 521
G
Sbjct: 214 G 214
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 319 NFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHV---- 374
+F +IG+G Y V L + + K N +++ + + KHV
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMK---VVKKELVNDDEDIDWVQTEKHVFEQA 77
Query: 375 -NLVALRGYSTATVPLEGHQRII-VCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR 432
N L G + + R+ V + ++ G L H+ +KL + +
Sbjct: 78 SNHPFLVGLHSC---FQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISL 132
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT--HLTTRVAGTLG 490
L YLH + II+RD+K N+LLD K+ D+G+ K EG+ T+ GT
Sbjct: 133 ALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPN 186
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEII 528
Y+APE D ++ GV++ E+++G+ +I+
Sbjct: 187 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 224
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 34/211 (16%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N+++
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIS 125
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSL-------YDHLFGSGMKKLSWPIRLRIALGTA 431
L T LE Q + + L + +L DH +++S+ + +
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH------ERMSYLLYQMLC---- 175
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
G+ +LH IIHRD+K SNI++ K+ DFGLA+ G + + T T Y
Sbjct: 176 -GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 229
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
APE L D++S G ++ E++ K
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 319 NFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHV---- 374
+F +IG+G Y V L + + K N +++ + + KHV
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMK---VVKKELVNDDEDIDWVQTEKHVFEQA 62
Query: 375 -NLVALRGYSTATVPLEGHQRII-VCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR 432
N L G + + R+ V + ++ G L H+ +KL + +
Sbjct: 63 SNHPFLVGLHSC---FQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISL 117
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT--HLTTRVAGTLG 490
L YLH + II+RD+K N+LLD K+ D+G+ K EG+ T+ GT
Sbjct: 118 ALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPN 171
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEII 528
Y+APE D ++ GV++ E+++G+ +I+
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 209
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 34/210 (16%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V + +L G VAVK+ F+N + A A E+ ++ V H N+++
Sbjct: 30 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAY--RELVLLKCVNHKNIIS 85
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSL-------YDHLFGSGMKKLSWPIRLRIALGTA 431
L T LE Q + + L + +L DH +++S+ + +
Sbjct: 86 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH------ERMSYLLYQMLC---- 135
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
G+ +LH IIHRD+K SNI++ K+ DFGLA+ + T T Y
Sbjct: 136 -GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRYY 189
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
APE L D++S G ++ EL+ G
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + EV I+ V H N++ L Y T +++ +L+ G
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT------DVVLILELVSGG 100
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + LS G+ YLH I H D+K NI LLD+
Sbjct: 101 ELFD--FLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPI 155
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA +G+ + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 156 PHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 521 G 521
G
Sbjct: 214 G 214
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF--NPEGITHLTTRVAGTLG 490
G+ YL + +HRD+ A N+LL AK+ DFGL+K E T +
Sbjct: 482 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 538
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLS-GKKACEIIQGKSV 533
+ APE Y K + SDV+SFGV++ E S G+K ++G V
Sbjct: 539 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + EV I+ V H N++ L Y T +++ +L+ G
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT------DVVLILELVSGG 100
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + LS G+ YLH I H D+K NI LLD+
Sbjct: 101 ELFD--FLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPI 155
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA +G+ + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 156 PHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 521 G 521
G
Sbjct: 214 G 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + EV I+ V H N++ L Y T +++ +L+ G
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT------DVVLILELVSGG 100
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + LS G+ YLH I H D+K NI LLD+
Sbjct: 101 ELFD--FLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPI 155
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA +G+ + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 156 PHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 521 G 521
G
Sbjct: 214 G 214
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 106/241 (43%), Gaps = 38/241 (15%)
Query: 300 SRSSNLARFKIEEIKAATMNFSR--ENI--IGKGGYGNV---YKGMLPNGTEVAVKR--- 349
SRS F EI +T + +N+ IG G G V Y +L VA+K+
Sbjct: 7 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSR 64
Query: 350 -FKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL-- 406
F+N + A A E+ ++ V H N++ L T LE Q + + L + +L
Sbjct: 65 PFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 122
Query: 407 -----YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAF 461
DH +++S+ + + G+ +LH IIHRD+K SNI++
Sbjct: 123 VIQMELDH------ERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDC 168
Query: 462 EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
K+ DFGLA+ G + + T T Y APE L D++S G ++ E++
Sbjct: 169 TLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCH 226
Query: 522 K 522
K
Sbjct: 227 K 227
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 26/207 (12%)
Query: 326 IGKGGYGNVYKGML-PNGTEVAVKRFKNC--SKAGDANFKHEVEIIASVKHVNLVALRGY 382
+G G YG V + G +VA+K+ S+ E+ ++ ++H N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRL---RIAL---GTARGLAY 436
T L D + L G+ + KL +L RI +GL Y
Sbjct: 93 FTPDETL---------DDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRY 143
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEY 496
+H IIHRD+K N+ ++E E K+ DFGLA+ + + + V T Y APE
Sbjct: 144 IHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVV-TRWYRAPEV 196
Query: 497 AL-YGKLTPGSDVYSFGVVLLELLSGK 522
L + + T D++S G ++ E+++GK
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 319 NFSRENIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHV---- 374
+F +IG+G Y V L + + K N +++ + + KHV
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMK---VVKKELVNDDEDIDWVQTEKHVFEQA 66
Query: 375 -NLVALRGYSTATVPLEGHQRII-VCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR 432
N L G + + R+ V + ++ G L H+ +KL + +
Sbjct: 67 SNHPFLVGLHSC---FQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEISL 121
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGIT--HLTTRVAGTLG 490
L YLH + II+RD+K N+LLD K+ D+G+ K EG+ T+ GT
Sbjct: 122 ALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPN 175
Query: 491 YVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEII 528
Y+APE D ++ GV++ E+++G+ +I+
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 213
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 34/211 (16%)
Query: 326 IGKGGYGNV---YKGMLPNGTEVAVKR----FKNCSKAGDANFKHEVEIIASVKHVNLVA 378
IG G G V Y +L VA+K+ F+N + A A E+ ++ V H N++
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIG 81
Query: 379 LRGYSTATVPLEGHQRIIVCDLLHNGSL-------YDHLFGSGMKKLSWPIRLRIALGTA 431
L T LE Q + + L + +L DH +++S+ + +
Sbjct: 82 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH------ERMSYLLYQMLC---- 131
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
G+ +LH IIHRD+K SNI++ K+ DFGLA+ G + + T T Y
Sbjct: 132 -GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 185
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
APE L D++S G ++ E++ K
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 20/214 (9%)
Query: 326 IGKGGYGNVYKGMLP-NGTEVAVKRFKNC--SKAGDANFKHEVEIIASVKHVNLVALRGY 382
+G G YG+V + +G +VA+K+ S+ E+ ++ ++H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
T L + L + GM+ I+ + +GL Y+H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIM---GMEFSEEKIQY-LVYQMLKGLKYIHSA-- 163
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAKF-NPEGITHLTTRVAGTLGYVAPEYAL-YG 500
++HRD+K N+ ++E E K+ DFGLA+ + E ++ TR Y APE L +
Sbjct: 164 -GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWM 217
Query: 501 KLTPGSDVYSFGVVLLELLSGKKACEIIQGKSVL 534
D++S G ++ E+L+GK + +GK L
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGKT---LFKGKDYL 248
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
+GKG + V + + + G E A K K S + E I +KH N+V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD- 88
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
++ EGH +I DL+ G L++ + + + + L + + Q
Sbjct: 89 ---SISEEGHHYLIF-DLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQ 139
Query: 443 PAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALY 499
++HRD+K N+LL + K+ DFGLA EG AGT GY++PE
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRK 198
Query: 500 GKLTPGSDVYSFGVVLLELLSG 521
D+++ GV+L LL G
Sbjct: 199 DPYGKPVDLWACGVILYILLVG 220
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 105/236 (44%), Gaps = 39/236 (16%)
Query: 315 AATMNFSRENI-----IGKGGYGNVYK----GMLPNGT--EVAVKRFKNCSKAGDAN-FK 362
A+ F R+ + +G+G +G V + G+ T VAVK K + +
Sbjct: 21 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM 80
Query: 363 HEVEIIASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW- 420
E++I+ + H+N+V L G T G +++ + G+L +L + + +
Sbjct: 81 SELKILIHIGHHLNVVNLLGACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 421 --PIRLR-----------IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGD 467
P L + A+G+ +L IHRD+ A NILL E K+ D
Sbjct: 137 EAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICD 193
Query: 468 FGLAK---FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
FGLA+ +P+ + R+ L ++APE T SDV+SFGV+L E+ S
Sbjct: 194 FGLARDIYKDPDYVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R IG G +G V + G A+K +H E I+ +V
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + + G ++ HL G + S P A
Sbjct: 102 FLVKLEFSFKDNSNL-----YMVMEYMPGGDMFSHLRRIG--RFSEPHARFYAAQIVLTF 154
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+L+D+ KV DFG AK + T + GT Y+AP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 20/224 (8%)
Query: 309 KIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEV----AVKRFKNCSKAGDANFKHE 364
K+++++ +F +IG+G +G V L N +V + +++ +A A F+ E
Sbjct: 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREE 124
Query: 365 VEIIASVKHVNLVALR-GYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIR 423
+++ + + L + + DLL S ++ M + +
Sbjct: 125 RDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARF-YLAE 183
Query: 424 LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTT 483
+ IA+ + L Y +HRDIK NIL+D ++ DFG E T ++
Sbjct: 184 MVIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS 234
Query: 484 RVAGTLGYVAPEY-----ALYGKLTPGSDVYSFGVVLLELLSGK 522
GT Y++PE G+ P D +S GV + E+L G+
Sbjct: 235 VAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R IG G +G V + G A+K +H E I+ +V
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + + G ++ HL G + S P A
Sbjct: 102 FLVKLEFSFKDNSNL-----YMVMEYMPGGDMFSHLRRIG--RFSEPHARFYAAQIVLTF 154
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+L+D+ KV DFG AK + T + GT Y+AP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 13/201 (6%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKR---FKNCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
IG G YG K + ++ V + + + ++A EV ++ +KH N+V Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR---Y 70
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKK---LSWPIRLRIALGTARGLAYLHY 439
+ IV + G L + G K+ L LR+ L H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 440 GVQPA--IIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYA 497
++HRD+K +N+ LD K+GDFGLA+ T GT Y++PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYYMSPEQM 188
Query: 498 LYGKLTPGSDVYSFGVVLLEL 518
SD++S G +L EL
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
NF + IG+G YG VYK G VA+K R ++ + E+ ++ + H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L + ++ + + L + S + + P+ +GLA
Sbjct: 67 IVKLLDV------IHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPE 495
+ H ++HRD+K N+L++ K+ DFGLA+ + V TL Y APE
Sbjct: 121 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 496 YALYGK-LTPGSDVYSFGVVLLELLSGK 522
L K + D++S G + E+++ +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 354 SKAGDANFKHEVEIIASVK-HVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFG 412
SK +AN + E+ + + H N+V L V + +V +LL+ G L++ +
Sbjct: 45 SKRMEANTQKEITALKLCEGHPNIVKLH-----EVFHDQLHTFLVMELLNGGELFERI-- 97
Query: 413 SGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILL---DEAFEAKVGDFG 469
K S I ++++H ++HRD+K N+L ++ E K+ DFG
Sbjct: 98 KKKKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFG 154
Query: 470 LAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
A+ P L T TL Y APE D++S GV+L +LSG+
Sbjct: 155 FARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + EV I+ V H N++ L Y T +++ +L+ G
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT------DVVLILELVSGG 100
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + LS G+ YLH I H D+K NI LLD+
Sbjct: 101 ELFD--FLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPI 155
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA +G+ + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 156 PHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 521 G 521
G
Sbjct: 214 G 214
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 29/220 (13%)
Query: 312 EIKAATMNFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIAS 370
E+KA + E +G+G YG V K +P+G AVKR + + + + ++ S
Sbjct: 30 EVKADDLEPIXE--LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQK-RLLXDLDIS 86
Query: 371 VKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL---YDHLFGSGMKKLSWPIRLRIA 427
+ V+ + A EG + +C L + SL Y + G + + I +IA
Sbjct: 87 XRTVDCPFTVTFYGALF-REGD--VWICXELXDTSLDKFYKQVIDKG-QTIPEDILGKIA 142
Query: 428 LGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG 487
+ + L +LH + ++IHRD+K SN+L++ + K DFG++ + + + AG
Sbjct: 143 VSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID--AG 198
Query: 488 TLGYVAPEYALYGKLTP---------GSDVYSFGVVLLEL 518
Y APE ++ P SD++S G+ +EL
Sbjct: 199 CKPYXAPE-----RINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R IG G +G V + G A+K +H E I+ +V
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + + G ++ HL G + S P A
Sbjct: 102 FLVKLEFSFKDNSNL-----YMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 154
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+L+D+ KV DFG AK + T + GT Y+AP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 23/121 (19%)
Query: 416 KKLSWPIRLRI----ALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLA 471
K++ PI RI + + L YL + +IHRD+K SNILLDE + K+ DFG++
Sbjct: 115 KRMQGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGIS 172
Query: 472 KFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG----------SDVYSFGVVLLELLSG 521
+ R AG Y+APE ++ P +DV+S G+ L+EL +G
Sbjct: 173 GRLVD--DKAKDRSAGCAAYMAPE-----RIDPPDPTKPDYDIRADVWSLGISLVELATG 225
Query: 522 K 522
+
Sbjct: 226 Q 226
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 97/242 (40%), Gaps = 29/242 (11%)
Query: 298 LESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR-FKNCSKA 356
++++ R I E+ A ++ + I G YG V G+ G VA+KR F S
Sbjct: 2 MQAKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDG 61
Query: 357 GDANF----------KHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNG-- 404
N E+ ++ H N++ LR H+ +V +L+
Sbjct: 62 RTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLA 121
Query: 405 -SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEA 463
++D + + + I LG LH + ++HRD+ NILL + +
Sbjct: 122 QVIHDQRIVISPQHIQY-FMYHILLG-------LHVLHEAGVVHRDLHPGNILLADNNDI 173
Query: 464 KVGDFGLAKFNPEGI--THLTTRVAGTLGYVAPEYALYGK-LTPGSDVYSFGVVLLELLS 520
+ DF LA+ + TH T Y APE + K T D++S G V+ E+ +
Sbjct: 174 TICDFNLAREDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
Query: 521 GK 522
K
Sbjct: 230 RK 231
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 83/204 (40%), Gaps = 19/204 (9%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKR---FKNCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
IG G YG K + ++ V + + + ++A EV ++ +KH N+V Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR---Y 70
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKK---LSWPIRLRIALGTARGLAYLHY 439
+ IV + G L + G K+ L LR+ L H
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 440 GVQPA--IIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITH---LTTRVAGTLGYVAP 494
++HRD+K +N+ LD K+GDFGLA+ + H GT Y++P
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI----LNHDEDFAKEFVGTPYYMSP 185
Query: 495 EYALYGKLTPGSDVYSFGVVLLEL 518
E SD++S G +L EL
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 363 HEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI 422
E+ I+ + H N+V L P E H +V +L++ G + + +K LS
Sbjct: 85 QEIAILKKLDHPNVVKL--VEVLDDPNEDH-LYMVFELVNQGPVME---VPTLKPLSEDQ 138
Query: 423 RLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLT 482
+G+ YLHY IIHRDIK SN+L+ E K+ DFG++ +G L
Sbjct: 139 ARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSN-EFKGSDALL 194
Query: 483 TRVAGTLGYVAPE-YALYGKLTPGS--DVYSFGVVLLELLSGK 522
+ GT ++APE + K+ G DV++ GV L + G+
Sbjct: 195 SNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---FNPEGITHLTTRVA 486
A+G+ +L IHRD+ A NILL E K+ DFGLA+ +P+ + R+
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
L ++APE T SDV+SFGV+L E+ S
Sbjct: 259 --LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---FNPEGITHLTTRVA 486
A+G+ +L IHRD+ A NILL E K+ DFGLA+ +P+ + R+
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
L ++APE T SDV+SFGV+L E+ S
Sbjct: 257 --LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 30/225 (13%)
Query: 319 NFSRENIIGKGGYGNVYKGMLP-NGTEVAVKRFKNCSKA-GDANFKHEVEIIASVKHVNL 376
+F +G+GG+G V++ + A+KR + ++ EV+ +A ++H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 377 VALRGYSTATVPLEGHQRI----------IVCDLLHNGSLYDHLFGS-GMKKLSWPIRLR 425
V Y A + +++ I L +L D + G +++ + L
Sbjct: 66 VR---YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 426 IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITHLT 482
I L A + +LH ++HRD+K SNI KVGDFGL + E T LT
Sbjct: 123 IFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 483 --------TRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELL 519
T GT Y++PE + D++S G++L ELL
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 95/213 (44%), Gaps = 43/213 (20%)
Query: 326 IGKGGYGNVYKGMLPNGTE--VAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
IG G +G V + M T+ VAVK + A D N + E+ S++H N+V +
Sbjct: 28 IGSGNFG-VARLMRDKLTKELVAVKYIER-GAAIDENVQREIINHRSLRHPNIVRFK--- 82
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR--------GLA 435
V L I+ + G LY+ + +G R + AR G++
Sbjct: 83 --EVILTPTHLAIIMEYASGGELYERICNAG----------RFSEDEARFFFQQLLSGVS 130
Query: 436 YLHYGVQPAIIHRDIKASNILLD--EAFEAKVGDFGLAKFNPEGITHLTTR-VAGTLGYV 492
Y H +Q I HRD+K N LLD A K+ DFG +K + H + GT Y+
Sbjct: 131 YCH-SMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYI 184
Query: 493 APEYALY----GKLTPGSDVYSFGVVLLELLSG 521
APE L GK+ +DV+S GV L +L G
Sbjct: 185 APEVLLRQEYDGKI---ADVWSCGVTLYVMLVG 214
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 97/242 (40%), Gaps = 29/242 (11%)
Query: 298 LESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPNGTEVAVKR-FKNCSKA 356
++++ R I E+ A ++ + I G YG V G+ G VA+KR F S
Sbjct: 2 MQAKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDG 61
Query: 357 GDANF----------KHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNG-- 404
N E+ ++ H N++ LR H+ +V +L+
Sbjct: 62 RTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLA 121
Query: 405 -SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEA 463
++D + + + I LG LH + ++HRD+ NILL + +
Sbjct: 122 QVIHDQRIVISPQHIQY-FMYHILLG-------LHVLHEAGVVHRDLHPGNILLADNNDI 173
Query: 464 KVGDFGLAKFNPEGI--THLTTRVAGTLGYVAPEYALYGK-LTPGSDVYSFGVVLLELLS 520
+ DF LA+ + TH T Y APE + K T D++S G V+ E+ +
Sbjct: 174 TICDFNLAREDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
Query: 521 GK 522
K
Sbjct: 230 RK 231
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---FNPEGITHLTTRVA 486
A+G+ +L IHRD+ A NILL E K+ DFGLA+ +P+ + R+
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
L ++APE T SDV+SFGV+L E+ S
Sbjct: 264 --LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK---FNPEGITHLTTRVA 486
A+G+ +L IHRD+ A NILL E K+ DFGLA+ +P+ + R+
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
L ++APE T SDV+SFGV+L E+ S
Sbjct: 266 --LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 33/252 (13%)
Query: 288 VTDNDEPSLVLESRSSN-LARFK-----IEEIKAATMNFSRENIIGKGGYGNV----YKG 337
V D D P+L N L+R+K I +++ ++ +IG+G +G V +K
Sbjct: 33 VYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKS 92
Query: 338 MLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIV 397
+ +F+ ++ A F E +I+A +V L Y+ + +V
Sbjct: 93 TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL-FYAFQ----DDRYLYMV 147
Query: 398 CDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILL 457
+ + G L + + + + W TA + L IHRD+K N+LL
Sbjct: 148 MEYMPGGDLVNLMSNYDVPE-KWA-----RFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 201
Query: 458 DEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEY-------ALYGKLTPGSDVY 509
D++ K+ DFG K N EG+ T V GT Y++PE YG+ D +
Sbjct: 202 DKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGR---ECDWW 257
Query: 510 SFGVVLLELLSG 521
S GV L E+L G
Sbjct: 258 SVGVFLYEMLVG 269
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 38/241 (15%)
Query: 300 SRSSNLARFKIEEIKAATMNFSR--ENI--IGKGGYGNV---YKGMLPNGTEVAVKR--- 349
SRS F EI +T + +N+ IG G G V Y +L VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSR 59
Query: 350 -FKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL-- 406
F+N + A A E+ ++ V H N++ L T LE Q + + L + +L
Sbjct: 60 PFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 117
Query: 407 -----YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAF 461
DH +++S+ + + G+ +LH IIHRD+K SNI++
Sbjct: 118 VIQMELDH------ERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 462 EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
K+ DFGLA+ G + + T Y APE L D++S G ++ E++
Sbjct: 164 TLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCH 221
Query: 522 K 522
K
Sbjct: 222 K 222
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 33/252 (13%)
Query: 288 VTDNDEPSLVLESRSSN-LARFK-----IEEIKAATMNFSRENIIGKGGYGNV----YKG 337
V D D P+L N L+R+K I +++ ++ +IG+G +G V +K
Sbjct: 38 VYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKS 97
Query: 338 MLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIV 397
+ +F+ ++ A F E +I+A +V L Y+ + +V
Sbjct: 98 TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL-FYAFQ----DDRYLYMV 152
Query: 398 CDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILL 457
+ + G L + + + + W TA + L IHRD+K N+LL
Sbjct: 153 MEYMPGGDLVNLMSNYDVPE-KWA-----RFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 206
Query: 458 DEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEY-------ALYGKLTPGSDVY 509
D++ K+ DFG K N EG+ T V GT Y++PE YG+ D +
Sbjct: 207 DKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGR---ECDWW 262
Query: 510 SFGVVLLELLSG 521
S GV L E+L G
Sbjct: 263 SVGVFLYEMLVG 274
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 103/249 (41%), Gaps = 64/249 (25%)
Query: 319 NFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFK-------NCSKAGDANFKHEVEIIAS 370
N+ +++IG+G YG VY N + VA+K+ +C + E+ I+
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKR-----ILREITILNR 83
Query: 371 VKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYD--HLFGSGMKKL-SWPIRLR-- 425
+K ++ L H II DLL LY + S +KKL PI L
Sbjct: 84 LKSDYIIRL------------HDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQ 131
Query: 426 ----IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITH 480
I G ++H + IIHRD+K +N LL++ K+ DFGLA+ N + H
Sbjct: 132 HVKTILYNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIH 188
Query: 481 ------------------------LTTRVAGTLGYVAPEYALYGK-LTPGSDVYSFGVVL 515
LT+ V T Y APE L + T D++S G +
Sbjct: 189 IVNDLEEKEENEEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTNSIDIWSTGCIF 247
Query: 516 LELLSGKKA 524
ELL+ K+
Sbjct: 248 AELLNMMKS 256
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T +AGT Y+APE L D ++ GV++
Sbjct: 173 LIDQQGYIQVTDFGFAK----RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
E+ +G
Sbjct: 229 YEMAAG 234
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 33/252 (13%)
Query: 288 VTDNDEPSLVLESRSSN-LARFK-----IEEIKAATMNFSRENIIGKGGYGNV----YKG 337
V D D P+L N L+R+K I +++ ++ +IG+G +G V +K
Sbjct: 38 VYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKS 97
Query: 338 MLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIV 397
+ +F+ ++ A F E +I+A +V L Y+ + +V
Sbjct: 98 TRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL-FYAFQ----DDRYLYMV 152
Query: 398 CDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILL 457
+ + G L + + + + W TA + L IHRD+K N+LL
Sbjct: 153 MEYMPGGDLVNLMSNYDVPE-KWA-----RFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 206
Query: 458 DEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEY-------ALYGKLTPGSDVY 509
D++ K+ DFG K N EG+ T V GT Y++PE YG+ D +
Sbjct: 207 DKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGR---ECDWW 262
Query: 510 SFGVVLLELLSG 521
S GV L E+L G
Sbjct: 263 SVGVFLYEMLVG 274
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 39/211 (18%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G E+ ++ + D N K E+ S++H N+V +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK----- 81
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR--------GLAYL 437
V L IV + G L++ + +G R + AR G++Y
Sbjct: 82 EVILTPTHLAIVMEYASGGELFERICNAG----------RFSEDEARFFFQQLISGVSYA 131
Query: 438 HYGVQPAIIHRDIKASNILLD--EAFEAKVGDFGLAKFNPEGITHLTTRVA-GTLGYVAP 494
H +Q + HRD+K N LLD A K+ DFG +K + H + A GT Y+AP
Sbjct: 132 H-AMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAYIAP 185
Query: 495 EYALY----GKLTPGSDVYSFGVVLLELLSG 521
E L GK+ +DV+S GV L +L G
Sbjct: 186 EVLLKKEYDGKV---ADVWSCGVTLYVMLVG 213
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 326 IGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGD--ANFKHEVEIIASVKHVNLVALRGY 382
+G+G + V + + + G E A K K + D A HE+ ++ K R
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCP----RVI 92
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
+ V + I++ + G ++ + +S +R+ G+ YLH Q
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---Q 149
Query: 443 PAIIHRDIKASNILLDEAF---EAKVGDFGLAKFNPEGITHLTT--RVAGTLGYVAPEYA 497
I+H D+K NILL + + K+ DFG+++ I H + GT Y+APE
Sbjct: 150 NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR----KIGHACELREIMGTPEYLAPEIL 205
Query: 498 LYGKLTPGSDVYSFGVVLLELLS 520
Y +T +D+++ G++ LL+
Sbjct: 206 NYDPITTATDMWNIGIIAYMLLT 228
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 38/241 (15%)
Query: 300 SRSSNLARFKIEEIKAATMNFSR--ENI--IGKGGYGNV---YKGMLPNGTEVAVKR--- 349
SRS F EI +T + +N+ IG G G V Y +L VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSR 59
Query: 350 -FKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSL-- 406
F+N + A A E+ ++ V H N++ L T LE Q + + L + +L
Sbjct: 60 PFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 117
Query: 407 -----YDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAF 461
DH +++S+ + + G+ +LH IIHRD+K SNI++
Sbjct: 118 VIQMELDH------ERMSYLLYQMLC-----GIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 462 EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
K+ DFGLA+ G + + T Y APE L D++S G ++ E++
Sbjct: 164 TLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCH 221
Query: 522 K 522
K
Sbjct: 222 K 222
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + + EV I+ ++H N++ L Y T I++ +L+ G
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT------DVILILELVAGG 99
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + L+ G+ YLH I H D+K NI LLD
Sbjct: 100 ELFD--FLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPK 154
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA G + + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 155 PRIKIIDFGLAHKIDFG--NEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
Query: 521 G 521
G
Sbjct: 213 G 213
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 325 IIGKGGYGNVYKGMLPN-GTEVAVKRF--KNCSKAGDANFKHEVEIIASVKHVNLVALRG 381
++G+G YG V K + G VA+K+F + K E++++ ++H NLV L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNL-- 89
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYD-HLFGSGMKKLSWPIRLRIALGTARGLAYLHYG 440
V + + +V + + + L D LF +G L + + + G+ + H
Sbjct: 90 ---LEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCH-- 141
Query: 441 VQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYG 500
IIHRDIK NIL+ ++ K+ DFG A+ VA T Y APE L G
Sbjct: 142 -SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA-TRWYRAPE-LLVG 198
Query: 501 KLTPGS--DVYSFGVVLLELLSGK 522
+ G DV++ G ++ E+ G+
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 105 MVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 159
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+DE +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 160 LIDEQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 215
Query: 516 LELLSG 521
E+ +G
Sbjct: 216 YEMAAG 221
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
IGKG + V + + L G E A K K S + E I +KH N+V L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHD- 70
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
++ EG +V DL+ G L++ + + + + L + + Q
Sbjct: 71 ---SISEEGFH-YLVFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQ 121
Query: 443 PAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEY--- 496
++HRD+K N+LL + K+ DFGLA +G AGT GY++PE
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 497 ALYGKLTPGSDVYSFGVVLLELLSG 521
YGK D+++ GV+L LL G
Sbjct: 181 EAYGKPV---DIWACGVILYILLVG 202
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 326 IGKGGYGNVYKGMLP-NGTEVAVKRFKNCSKAG-DANFKHEVEIIASVKHVNLVALRGYS 383
+G+G Y VYKG VA+K + + G EV ++ +KH N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQP 443
L +V + L + L +L G ++L + RGLAY H +
Sbjct: 70 HTEKSL-----TLVFEYL-DKDLKQYLDDCGNIINMHNVKLFL-FQLLRGLAYCH---RQ 119
Query: 444 AIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYAL-YGKL 502
++HRD+K N+L++E E K+ DFGLA+ V TL Y P+ L
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDY 178
Query: 503 TPGSDVYSFGVVLLELLSGK 522
+ D++ G + E+ +G+
Sbjct: 179 STQIDMWGVGCIFYEMATGR 198
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 91/218 (41%), Gaps = 19/218 (8%)
Query: 316 ATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVK--RFKNCSKAGDANFKHEVEIIA--- 369
AT + IG G YG VYK P+ G VA+K R N G V +A
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 370 ---SVKHVNLVALRGY-STATVPLEGHQRIIVCDLLHNGSLY-DHLFGSGMKKLSWPIRL 424
+ +H N+V L +T+ E ++ + + Y D G+ + +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 425 RIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTR 484
R L RGL +LH I+HRD+K NIL+ K+ DFGLA+ + T
Sbjct: 127 RQFL---RGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTP 178
Query: 485 VAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGK 522
V TL Y APE L D++S G + E+ K
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + + EV I+ ++H N++ L Y T I++ +L+ G
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT------DVILILELVAGG 99
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + L+ G+ YLH I H D+K NI LLD
Sbjct: 100 ELFD--FLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPK 154
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA G + + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 155 PRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
Query: 521 G 521
G
Sbjct: 213 G 213
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 119 MVLEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 173
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ KV DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 174 LIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 516 LELLSG 521
E+ +G
Sbjct: 230 YEMAAG 235
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 326 IGKGGYGNVYKGMLPNGTE-VAVKRFK--NCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
IG+G YG V+K E VA+KR + + + ++ E+ ++ +KH N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
L +++ + + L + F S L I +GL + H
Sbjct: 70 ------LHSDKKLTLVFEFCDQDLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGFCH---S 119
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKL 502
++HRD+K N+L++ E K+ DFGLA+ + + V TL Y P+ KL
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKL 178
Query: 503 TPGS-DVYSFGVVLLELLSGKK 523
S D++S G + EL + +
Sbjct: 179 YSTSIDMWSAGCIFAELANAAR 200
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 118 MVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
++D+ KV DFGLAK + T + GT Y+APE L D ++ GV++
Sbjct: 173 MIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
E+ +G
Sbjct: 229 YEMAAG 234
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + + EV I+ ++H N++ L Y T I++ +L+ G
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT------DVILILELVAGG 99
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + L+ G+ YLH I H D+K NI LLD
Sbjct: 100 ELFD--FLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPK 154
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA G + + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 155 PRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
Query: 521 G 521
G
Sbjct: 213 G 213
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 24/210 (11%)
Query: 319 NFSRENIIGKGGYGNVYKGML----PNGTEVAVKRFKNCSKAGDANFKH---EVEIIASV 371
F R +G G +G V ML G A+K +H E I+ +V
Sbjct: 42 QFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTA 431
LV L YS + +V + + G ++ HL G + S P A
Sbjct: 99 NFPFLVKLE-YSFK----DNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIV 151
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
YLH +I+RD+K N+L+D+ +V DFG AK + T + GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEY 204
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
+APE L D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + + EV I+ ++H N++ L Y T I++ +L+ G
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT------DVILILELVAGG 99
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D L + + L+ G+ YLH I H D+K NI LLD
Sbjct: 100 ELFDFL--AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPK 154
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA + + + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 155 PRIKIIDFGLA--HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
Query: 521 G 521
G
Sbjct: 213 G 213
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 444 AIIHRDIKASNILLDEAFEAKVGDFGL-AKFNPEGITHLTTRVAGTLGYVAPEY------ 496
+IHRD+K N+LLD+ K+ DFG K + G+ H T V GT Y++PE
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLKSQGG 252
Query: 497 -ALYGKLTPGSDVYSFGVVLLELLSG 521
YG+ D +S GV L E+L G
Sbjct: 253 DGYYGR---ECDWWSVGVFLFEMLVG 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + + EV I+ ++H N++ L Y T I++ +L+ G
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT------DVILILELVAGG 98
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + L+ G+ YLH I H D+K NI LLD
Sbjct: 99 ELFD--FLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPK 153
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA + + + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 154 PRIKIIDFGLA--HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211
Query: 521 G 521
G
Sbjct: 212 G 212
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + + EV I+ ++H N++ L Y T I++ +L+ G
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT------DVILILELVAGG 99
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + L+ G+ YLH I H D+K NI LLD
Sbjct: 100 ELFD--FLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPK 154
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA G + + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 155 PRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
Query: 521 G 521
G
Sbjct: 213 G 213
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 24/210 (11%)
Query: 319 NFSRENIIGKGGYGNVYKGML----PNGTEVAVKRFKNCSKAGDANFKH---EVEIIASV 371
F R +G G +G V ML G A+K +H E I+ +V
Sbjct: 42 QFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTA 431
LV L YS + +V + + G ++ HL G + S P A
Sbjct: 99 NFPFLVKLE-YSFK----DNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIV 151
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
YLH +I+RD+K N+L+D+ +V DFG AK + T + GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEY 204
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
+APE L D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + + EV I+ ++H N++ L Y T I++ +L+ G
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT------DVILILELVAGG 98
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + L+ G+ YLH I H D+K NI LLD
Sbjct: 99 ELFD--FLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPK 153
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA G + + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 154 PRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211
Query: 521 G 521
G
Sbjct: 212 G 212
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 24/210 (11%)
Query: 319 NFSRENIIGKGGYGNVYKGML----PNGTEVAVKRFKNCSKAGDANFKH---EVEIIASV 371
F R +G G +G V ML G A+K +H E I+ +V
Sbjct: 42 QFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 372 KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTA 431
LV L YS + +V + + G ++ HL G + S P A
Sbjct: 99 NFPFLVKLE-YSFK----DNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIV 151
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
YLH +I+RD+K N+L+D+ +V DFG AK + T + GT Y
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEY 204
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
+APE L D ++ GV++ E+ +G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 30/223 (13%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR--FKNCSKAGDANFKHEVEIIASVKHVNLVAL--- 379
IG+G +G V+K G +VA+K+ +N + E++I+ +KH N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 380 -RGYSTATVPLEGHQRIIV--CDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY 436
R ++ +G ++ C+ G L + L + ++ R+ GL Y
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQMLLNGLYY 140
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG---TLGYVA 493
+H I+HRD+KA+N+L+ K+ DFGLA+ R TL Y
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 494 PEYAL----YGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKS 532
PE L YG P D++ G ++ E+ + I+QG +
Sbjct: 198 PELLLGERDYG---PPIDLWGAGCIMAEMWT---RSPIMQGNT 234
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + + EV I+ ++H N++ L Y T I++ +L+ G
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT------DVILILELVAGG 99
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + L+ G+ YLH I H D+K NI LLD
Sbjct: 100 ELFD--FLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPK 154
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA + + + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 155 PRIKIIDFGLA--HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
Query: 521 G 521
G
Sbjct: 213 G 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + + EV I+ ++H N++ L Y T I++ +L+ G
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT------DVILILELVAGG 99
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + L+ G+ YLH I H D+K NI LLD
Sbjct: 100 ELFD--FLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPK 154
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA G + + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 155 PRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
Query: 521 G 521
G
Sbjct: 213 G 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + + EV I+ ++H N++ L Y T I++ +L+ G
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT------DVILILELVAGG 99
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + L+ G+ YLH I H D+K NI LLD
Sbjct: 100 ELFD--FLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPK 154
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA G + + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 155 PRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
Query: 521 G 521
G
Sbjct: 213 G 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + + EV I+ ++H N++ L Y T I++ +L+ G
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT------DVILILELVAGG 99
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + L+ G+ YLH I H D+K NI LLD
Sbjct: 100 ELFD--FLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPK 154
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA + + + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 155 PRIKIIDFGLA--HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
Query: 521 G 521
G
Sbjct: 213 G 213
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 324 NIIGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
+IGKG +G VY G + + + ++ FK EV +H N+V G
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQP 443
+ L I+ L +LY + + + L +IA +G+ YLH
Sbjct: 99 MSPPHL-----AIITSLCKGRTLYSVVRDAKI-VLDVNKTRQIAQEIVKGMGYLH---AK 149
Query: 444 AIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVA------GTLGYVAPEYA 497
I+H+D+K+ N+ D + + DFGL F+ G+ R G L ++APE
Sbjct: 150 GILHKDLKSKNVFYDNG-KVVITDFGL--FSISGVLQAGRREDKLRIQNGWLCHLAPE-- 204
Query: 498 LYGKLTPG-----------SDVYSFGVVLLEL 518
+ +L+P SDV++ G + EL
Sbjct: 205 IIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + + EV I+ ++H N++ L Y T I++ +L+ G
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT------DVILILELVAGG 99
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + L+ G+ YLH I H D+K NI LLD
Sbjct: 100 ELFD--FLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPK 154
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA G + + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 155 PRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
Query: 521 G 521
G
Sbjct: 213 G 213
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R +G G +G V + G A+K +H E I+ +V
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 87
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + + G ++ HL G + S P A
Sbjct: 88 FLVKLEFSFKDNSNL-----YMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 140
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+L+D+ +V DFG AK + T + GT Y+AP
Sbjct: 141 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAP 193
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 194 EIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 173 LIDQQGYIQVTDFGFAK----RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
E+ +G
Sbjct: 229 YEMAAG 234
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVA--VKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
+GKG + V + + + G E A + K S + E I +KH N+V L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD- 77
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
++ EGH +I DL+ G L++ + + + + L + + Q
Sbjct: 78 ---SISEEGHHYLIF-DLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQ 128
Query: 443 PAIIHRDIKASNILLDEAFEA---KVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALY 499
++HR++K N+LL + K+ DFGLA EG AGT GY++PE
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRK 187
Query: 500 GKLTPGSDVYSFGVVLLELLSG 521
D+++ GV+L LL G
Sbjct: 188 DPYGKPVDLWACGVILYILLVG 209
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 119 MVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 173
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 174 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 516 LELLSG 521
E+ +G
Sbjct: 230 YEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R +G G +G V + G A+K +H E I+ +V
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + + G ++ HL G + S P A
Sbjct: 102 FLVKLEFSFKDNSNL-----YMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 154
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+L+D+ +V DFG AK + T + GT Y+AP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 173 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
E+ +G
Sbjct: 229 YEMAAG 234
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 39/211 (18%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G E+ ++ + D N K E+ S++H N+V +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK----- 80
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR--------GLAYL 437
V L IV + G L++ + +G R + AR G++Y
Sbjct: 81 EVILTPTHLAIVMEYASGGELFERICNAG----------RFSEDEARFFFQQLISGVSYC 130
Query: 438 HYGVQPAIIHRDIKASNILLD--EAFEAKVGDFGLAKFNPEGITHLTTR-VAGTLGYVAP 494
H +Q + HRD+K N LLD A K+ DFG +K + H + GT Y+AP
Sbjct: 131 H-AMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAP 184
Query: 495 EYALY----GKLTPGSDVYSFGVVLLELLSG 521
E L GK+ +DV+S GV L +L G
Sbjct: 185 EVLLKKEYDGKV---ADVWSCGVTLYVMLVG 212
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 100/217 (46%), Gaps = 30/217 (13%)
Query: 318 MNFSRENIIGKGGYGN-VYKGMLPNGTEVAVKR-FKNCSKAGDANFKHEVEII-ASVKHV 374
++F ++++G G G VY+GM N +VAVKR C D EV+++ S +H
Sbjct: 24 ISFCPKDVLGHGAEGTIVYRGMFDN-RDVAVKRILPECFSFAD----REVQLLRESDEHP 78
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSW-PIRLRIALGTARG 433
N++ R + T + I +C +L +++ L PI L T G
Sbjct: 79 NVI--RYFCTEKDRQFQYIAIELC----AATLQEYVEQKDFAHLGLEPITL--LQQTTSG 130
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDE-----AFEAKVGDFGLAKFNPEGITHLTTR--VA 486
LA+LH I+HRD+K NIL+ +A + DFGL K G + R V
Sbjct: 131 LAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187
Query: 487 GTLGYVAPEYALYG-KLTP--GSDVYSFGVVLLELLS 520
GT G++APE K P D++S G V ++S
Sbjct: 188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 173 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
E+ +G
Sbjct: 229 YEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 173 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
E+ +G
Sbjct: 229 YEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 173 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
E+ +G
Sbjct: 229 YEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 173 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
E+ +G
Sbjct: 229 YEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 111 MVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 165
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 166 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 221
Query: 516 LELLSG 521
E+ +G
Sbjct: 222 YEMAAG 227
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR--FKNCSKAGDANFKHEVEIIASVKHVNLVAL--- 379
IG+G +G V+K G +VA+K+ +N + E++I+ +KH N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 380 -RGYSTATVPLEGHQRIIV--CDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY 436
R ++ +G ++ C+ G L + L + ++ R+ GL Y
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQMLLNGLYY 139
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG---TLGYVA 493
+H + I+HRD+KA+N+L+ K+ DFGLA+ R TL Y
Sbjct: 140 IH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 494 PEYAL----YGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKS 532
PE L YG P D++ G ++ E+ + I+QG +
Sbjct: 197 PELLLGERDYG---PPIDLWGAGCIMAEMWT---RSPIMQGNT 233
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R +G G +G V + G A+K +H E I+ +V
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + + G ++ HL G + S P A
Sbjct: 102 FLVKLEFSFKDNSNL-----YMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 154
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+L+D+ +V DFG AK + T + GT Y+AP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R +G G +G V + G A+K +H E I+ +V
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + + G ++ HL G + S P A
Sbjct: 102 FLVKLEFSFKDNSNL-----YMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 154
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+L+D+ +V DFG AK + T + GT Y+AP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R +G G +G V + G A+K +H E I+ +V
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + + G ++ HL G + S P A
Sbjct: 103 FLVKLEFSFKDNSNL-----YMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 155
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+L+D+ +V DFG AK + T + GT Y+AP
Sbjct: 156 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 208
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + + EV I+ ++H N++ L Y T I++ +L+ G
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT------DVILIGELVAGG 99
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D F + + L+ G+ YLH I H D+K NI LLD
Sbjct: 100 ELFD--FLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPK 154
Query: 462 -EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
K+ DFGLA + + + GT +VAPE Y L +D++S GV+ LLS
Sbjct: 155 PRIKIIDFGLA--HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
Query: 521 G 521
G
Sbjct: 213 G 213
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R +G G +G V + G A+K +H E I+ +V
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + + G ++ HL G + S P A
Sbjct: 102 FLVKLEFSFKDNSNL-----YMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 154
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+L+D+ +V DFG AK + T + GT Y+AP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 119 MVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 173
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 174 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 516 LELLSG 521
E+ +G
Sbjct: 230 YEMAAG 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 83/207 (40%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R +G G +G V + G A+K +H E I+ +V
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + + G ++ HL G + S P A
Sbjct: 103 FLVKLEFSFKDNSNL-----YMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 155
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+L+D+ +V DFG AK + T + GT Y+AP
Sbjct: 156 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAP 208
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 26/184 (14%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRG-YSTATVPLEGHQRIIVCDLLHNG 404
KR S+ G + + EV I+ ++H N++ L Y T I++ +L+ G
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT------DVILILELVAGG 99
Query: 405 SLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF-- 461
L+D L + + L+ G+ YLH I H D+K NI LLD
Sbjct: 100 ELFDFL--AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPK 154
Query: 462 -EAKVGDFGLA---KFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLE 517
K+ DFGLA F E + GT +VAPE Y L +D++S GV+
Sbjct: 155 PRIKIIDFGLAHKIDFGNE-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 209
Query: 518 LLSG 521
LLSG
Sbjct: 210 LLSG 213
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 119 MVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 173
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 174 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 516 LELLSG 521
E+ +G
Sbjct: 230 YEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 119 MVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 173
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 174 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 516 LELLSG 521
E+ +G
Sbjct: 230 YEMAAG 235
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 88/225 (39%), Gaps = 45/225 (20%)
Query: 317 TMNFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKH--------EVEI 367
+ +S + +G G +G V+ + EV VK K D + E+ I
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 368 IASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLF---GSGMK-------- 416
++ V+H N++ V D+ N + + GSG+
Sbjct: 83 LSRVEHANIIK------------------VLDIFENQGFFQLVMEKHGSGLDLFAFIDRH 124
Query: 417 -KLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNP 475
+L P+ I + YL IIHRDIK NI++ E F K+ DFG A +
Sbjct: 125 PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE 181
Query: 476 EGITHLTTRVAGTLGYVAPEYALYGKLT-PGSDVYSFGVVLLELL 519
G L GT+ Y APE + P +++S GV L L+
Sbjct: 182 RG--KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 94/213 (44%), Gaps = 43/213 (20%)
Query: 326 IGKGGYGNVYKGMLPNGTE--VAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
IG G +G V + M + VAVK + K AN K E+ S++H N+V +
Sbjct: 27 IGSGNFG-VARLMRDKQSNELVAVKYIERGEKIA-ANVKREIINHRSLRHPNIVRFK--- 81
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR--------GLA 435
V L IV + G L++ + +G R + AR G++
Sbjct: 82 --EVILTPTHLAIVMEYASGGELFERICNAG----------RFSEDEARFFFQQLISGVS 129
Query: 436 YLHYGVQPAIIHRDIKASNILLD--EAFEAKVGDFGLAKFNPEGITHLTTR-VAGTLGYV 492
Y H +Q + HRD+K N LLD A K+ DFG +K + H + GT Y+
Sbjct: 130 YCH-AMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYI 183
Query: 493 APEYALY----GKLTPGSDVYSFGVVLLELLSG 521
APE L GK+ +DV+S GV L +L G
Sbjct: 184 APEVLLKKEYDGKV---ADVWSCGVTLYVMLVG 213
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 119 MVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 173
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
++D+ KV DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 174 MIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 516 LELLSG 521
E+ +G
Sbjct: 230 YEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 119 MVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 173
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
++D+ KV DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 174 MIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 516 LELLSG 521
E+ +G
Sbjct: 230 YEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 82/207 (39%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R +G G +G V + G A+K +H E I+ +V
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + G ++ HL G + S P A
Sbjct: 102 FLVKLEFSFKDNSNL-----YMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 154
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+++D+ KV DFG AK + T + GT Y+AP
Sbjct: 155 EYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 139 MVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 193
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 194 LIDQQGYIQVTDFGFAK----RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 249
Query: 516 LELLSG 521
E+ +G
Sbjct: 250 YEMAAG 255
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 119 MVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 173
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
++D+ KV DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 174 MIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 516 LELLSG 521
E+ +G
Sbjct: 230 YEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 118 MVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
++D+ +V DFGLAK + T + GT Y+APE L D ++ GV++
Sbjct: 173 MIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
E+ +G
Sbjct: 229 YEMAAG 234
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR--FKNCSKAGDANFKHEVEIIASVKHVNLVAL--- 379
IG+G +G V+K G +VA+K+ +N + E++I+ +KH N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 380 -RGYSTATVPLEGHQRIIV--CDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY 436
R ++ +G ++ C+ G L + L + ++ R+ GL Y
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQMLLNGLYY 140
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG---TLGYVA 493
+H + I+HRD+KA+N+L+ K+ DFGLA+ R TL Y
Sbjct: 141 IH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 494 PEYAL----YGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKS 532
PE L YG P D++ G ++ E+ + I+QG +
Sbjct: 198 PELLLGERDYG---PPIDLWGAGCIMAEMWT---RSPIMQGNT 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 139 MVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 193
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 194 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 249
Query: 516 LELLSG 521
E+ +G
Sbjct: 250 YEMAAG 255
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSK--AGD-ANFKHEVEIIASVKHVNLVALRGY 382
+GKG + V + + T+ + N K A D + E I +KH N+V L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD- 97
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
++ EG +V DL+ G L++ + + + + L +++ Q
Sbjct: 98 ---SISEEGFH-YLVFDLVTGGELFEDIVAR-----EYYSEADASHCIHQILESVNHIHQ 148
Query: 443 PAIIHRDIKASNILLD---EAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALY 499
I+HRD+K N+LL + K+ DFGLA +G AGT GY++PE
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVLRK 207
Query: 500 GKLTPGSDVYSFGVVLLELLSG 521
D+++ GV+L LL G
Sbjct: 208 DPYGKPVDIWACGVILYILLVG 229
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 90/207 (43%), Gaps = 21/207 (10%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKR--FKN-CSKAG-DANFKHEVEIIASVKHVNLVALRG 381
+GKG +GNVY + + FK+ K G + + E+EI A + H N++ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 382 YSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYG 440
Y +RI ++ + G LY L S + L A L Y H
Sbjct: 91 Y------FYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADA--LMYCH-- 140
Query: 441 VQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYG 500
+IHRDIK N+LL E K+ DFG + P + + GTL Y+ PE + G
Sbjct: 141 -GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAP---SLRRKTMCGTLDYLPPE-MIEG 195
Query: 501 KL-TPGSDVYSFGVVLLELLSGKKACE 526
++ D++ GV+ ELL G E
Sbjct: 196 RMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGS 405
KR + S+ G + EV I+ ++H N++ L + +++ +L+ G
Sbjct: 47 KRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV-----VLILELVSGGE 101
Query: 406 LYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF--- 461
L+D F + + L+ + G+ YLH I H D+K NI LLD+
Sbjct: 102 LFD--FLAEKESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNP 156
Query: 462 EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
K+ DFG+A G + + GT +VAPE Y L +D++S GV+ LLSG
Sbjct: 157 RIKLIDFGIAHKIEAG--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 102/242 (42%), Gaps = 61/242 (25%)
Query: 319 NFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFK-------NCSKAGDANFKHEVEIIAS 370
N+ +++IG+G YG VY N + VA+K+ +C + E+ I+
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKR-----ILREITILNR 81
Query: 371 VKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYD--HLFGSGMKKL-SWPIRLR-- 425
+K ++ L + II DLL LY + S +KKL PI L
Sbjct: 82 LKSDYIIRL------------YDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEE 129
Query: 426 ----IALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITH 480
I G ++H + IIHRD+K +N LL++ KV DFGLA+ N E T+
Sbjct: 130 HIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTN 186
Query: 481 ---------------------LTTRVAGTLGYVAPEYALYGK-LTPGSDVYSFGVVLLEL 518
LT+ V T Y APE L + T D++S G + EL
Sbjct: 187 IVNDLEENEEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
Query: 519 LS 520
L+
Sbjct: 246 LN 247
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + + P A YLH +I+RD+K N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIG--RFAEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 173 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
E+ +G
Sbjct: 229 YEMAAG 234
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 18/180 (10%)
Query: 348 KRFKNCSKAG--DANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGS 405
KR + S+ G + EV I+ ++H N++ L + +++ +L+ G
Sbjct: 40 KRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV-----VLILELVSGGE 94
Query: 406 LYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF--- 461
L+D F + + L+ + G+ YLH I H D+K NI LLD+
Sbjct: 95 LFD--FLAEKESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNP 149
Query: 462 EAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
K+ DFG+A G + + GT +VAPE Y L +D++S GV+ LLSG
Sbjct: 150 RIKLIDFGIAHKIEAG--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 173 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
++ +G
Sbjct: 229 YQMAAG 234
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Query: 437 LHYGVQPAIIHRDIKASNILL--DEAFEAKVGDFGLA----KFNPEGITHLTTRVAGTLG 490
LHY I HRDIK N L +++FE K+ DFGL+ K N +TT+ AGT
Sbjct: 181 LHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTK-AGTPY 239
Query: 491 YVAPEY-----ALYGKLTPGSDVYSFGVVLLELLSG 521
+VAPE YG P D +S GV+L LL G
Sbjct: 240 FVAPEVLNTTNESYG---PKCDAWSAGVLLHLLLMG 272
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 101/251 (40%), Gaps = 32/251 (12%)
Query: 279 KKSEERVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMN-FSRENIIGKGGYGNVYKG 337
K SE+ VK + +++ L +++ A ++ F R +G G +G V
Sbjct: 8 KGSEQESVK-------EFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRV--- 57
Query: 338 ML----PNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHVNLVALRGYSTATVPLE 390
ML +G A+K +H E I+ +V LV L L
Sbjct: 58 MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNL- 116
Query: 391 GHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDI 450
+V + + G ++ HL G + P A YLH +I+RD+
Sbjct: 117 ----YMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH---SLDLIYRDL 167
Query: 451 KASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYS 510
K N+L+D+ +V DFG AK + T + GT Y+APE L D ++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 511 FGVVLLELLSG 521
GV++ E+ +G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 23/209 (11%)
Query: 326 IGKGGYGNVYKGMLP--------NGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLV 377
+G+G + ++KG+ + TEV +K + +F +++ + H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY- 436
G V G + I+V + + GSL +L KK I + L A+ LA+
Sbjct: 76 LNYG-----VCFCGDENILVQEFVKFGSLDTYL-----KKNKNCINILWKLEVAKQLAWA 125
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEG--ITHLTTRV-AGTLGYVA 493
+H+ + +IH ++ A NILL + K G+ K + G IT L + + +V
Sbjct: 126 MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP 185
Query: 494 PEYALYGK-LTPGSDVYSFGVVLLELLSG 521
PE K L +D +SFG L E+ SG
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 362 KHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWP 421
+ EV I+ ++H N++ L + +++ +L+ G L+D L + + L+
Sbjct: 77 EREVNILREIRHPNIITLHDIFENKTDV-----VLILELVSGGELFDFL--AEKESLTED 129
Query: 422 IRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI-LLDEAF---EAKVGDFGLAKFNPEG 477
+ G+ YLH I H D+K NI LLD+ K+ DFG+A G
Sbjct: 130 EATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 186
Query: 478 ITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
+ + GT +VAPE Y L +D++S GV+ LLSG
Sbjct: 187 --NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R +G G +G V + G A+K +H E I+ +V
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + G ++ HL G + S P A
Sbjct: 102 FLVKLEFSFKDNSNL-----YMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 154
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+++D+ +V DFG AK + T + GT Y+AP
Sbjct: 155 EYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + P A YLH +I+RD+K N+
Sbjct: 113 MVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 167
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 168 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 223
Query: 516 LELLSG 521
E+ +G
Sbjct: 224 YEMAAG 229
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 15/197 (7%)
Query: 326 IGKGGYGNVYKGMLPNGTE-VAVKRFK--NCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
IG+G YG V+K E VA+KR + + + ++ E+ ++ +KH N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
L +++ + + L + F S L I +GL + H
Sbjct: 70 ------LHSDKKLTLVFEFCDQDLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGFCH---S 119
Query: 443 PAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKL 502
++HRD+K N+L++ E K+ +FGLA+ + + V TL Y P+ KL
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKL 178
Query: 503 TPGS-DVYSFGVVLLEL 518
S D++S G + EL
Sbjct: 179 YSTSIDMWSAGCIFAEL 195
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + P A YLH +I+RD+K N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 173 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
E+ +G
Sbjct: 229 YEMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
++D+ +V DFG AK + T + GT Y+APE + D ++ GV++
Sbjct: 173 IIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
E+ +G
Sbjct: 229 YEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + P A YLH +I+RD+K N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 173 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
E+ +G
Sbjct: 229 YEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R +G G +G V + G A+K +H E I+ +V
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + + G ++ HL G + P A
Sbjct: 102 FLVKLEFSFKDNSNL-----YMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTF 154
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+L+D+ +V DFG AK + T + GT Y+AP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R +G G +G V + G A+K +H E I+ +V
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + + G ++ HL G + P A
Sbjct: 103 FLVKLEFSFKDNSNL-----YMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTF 155
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+L+D+ +V DFG AK + T + GT Y+AP
Sbjct: 156 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 208
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKR--FKNCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
IG+G +G V+K G +VA+K+ +N + E++I+ +KH N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 383 -STATVPLEGHQRII-----VCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY 436
T P + I C+ G L + L + ++ R+ GL Y
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQMLLNGLYY 140
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG---TLGYVA 493
+H + I+HRD+KA+N+L+ K+ DFGLA+ R TL Y
Sbjct: 141 IH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 494 PEYAL----YGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKS 532
PE L YG P D++ G ++ E+ + I+QG +
Sbjct: 198 PELLLGERDYG---PPIDLWGAGCIMAEMWT---RSPIMQGNT 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + P A YLH +I+RD+K N+
Sbjct: 111 MVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 165
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 166 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 221
Query: 516 LELLSG 521
E+ +G
Sbjct: 222 YEMAAG 227
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R +G G +G V + G A+K +H E I+ +V
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + + G ++ HL G + P A
Sbjct: 102 FLVKLEFSFKDNSNL-----YMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTF 154
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+L+D+ +V DFG AK + T + GT Y+AP
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 314 KAATMNFSRENIIGK---GGYGNVYKGMLPNGTEVAVK--RFKNCSKAGDANFKHEVEII 368
K + ++F + N + K G ++KG G ++ VK + ++ S +F E +
Sbjct: 3 KHSGIDFKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRL 61
Query: 369 ASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL 428
H N++ + G + P H +I + GSLY+ L + ++ AL
Sbjct: 62 RIFSHPNVLPVLGACQS--PPAPHPTLI-THWMPYGSLYNVLHEGTNFVVDQSQAVKFAL 118
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGT 488
ARG+A+LH ++P I + + ++++DE A++ KF+ + +
Sbjct: 119 DMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARIS-MADVKFSFQSPGRMYAP---- 172
Query: 489 LGYVAPEYALYGKLTP----GSDVYSFGVVLLELLS 520
+VAPE AL K +D++SF V+L EL++
Sbjct: 173 -AWVAPE-ALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 364 EVEIIASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI 422
E+EI+ +H N++ L+ V +G +V +L+ G L D + +K
Sbjct: 70 EIEILLRYGQHPNIITLK-----DVYDDGKHVYLVTELMRGGELLDKIL---RQKFFSER 121
Query: 423 RLRIALGT-ARGLAYLHYGVQPAIIHRDIKASNIL-LDEAFEA---KVGDFGLAKFNPEG 477
L T + + YLH ++HRD+K SNIL +DE+ ++ DFG AK
Sbjct: 122 EASFVLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRA 177
Query: 478 ITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
L T +VAPE G D++S G++L +L+G
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG-TL 489
A+G+A+L IHRD+ A NILL K+ DFGLA+ ++ A +
Sbjct: 178 AKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPV 234
Query: 490 GYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
++APE T SDV+S+G+ L EL S
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 81/207 (39%), Gaps = 18/207 (8%)
Query: 319 NFSRENIIGKGGYGNVY-KGMLPNGTEVAVKRFKNCSKAGDANFKH---EVEIIASVKHV 374
F R +G G +G V + G A+K +H E I+ +V
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 375 NLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGL 434
LV L L +V + G ++ HL G + P A
Sbjct: 102 FLVKLEFSFKDNSNL-----YMVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTF 154
Query: 435 AYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAP 494
YLH +I+RD+K N+++D+ KV DFG AK + T + GT Y+AP
Sbjct: 155 EYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
E L D ++ GV++ E+ +G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 424 LRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKF---NPEGITH 480
L I + A + +LH ++HRD+K SNI KVGDFGL + E T
Sbjct: 167 LHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 481 LTTRVA--------GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELL 519
LT A GT Y++PE + D++S G++L ELL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + G ++ HL G + P A YLH +I+RD+K N+
Sbjct: 119 MVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 173
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
++D+ KV DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 174 MIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 516 LELLSG 521
E+ +G
Sbjct: 230 YEMAAG 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + P A YLH +I+RD+K N+
Sbjct: 139 MVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 193
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+APE L D ++ GV++
Sbjct: 194 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 249
Query: 516 LELLSG 521
E+ +G
Sbjct: 250 YEMAAG 255
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 364 EVEIIASV-KHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPI 422
E+EI+ +H N++ L+ V +G +V +L+ G L D + +K
Sbjct: 70 EIEILLRYGQHPNIITLK-----DVYDDGKHVYLVTELMRGGELLDKIL---RQKFFSER 121
Query: 423 RLRIALGT-ARGLAYLHYGVQPAIIHRDIKASNIL-LDEAFEA---KVGDFGLAKFNPEG 477
L T + + YLH ++HRD+K SNIL +DE+ ++ DFG AK
Sbjct: 122 EASFVLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRA 177
Query: 478 ITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
L T +VAPE G D++S G++L +L+G
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG-T 488
A+G+A+L IHRD+ A NILL K+ DFGLA+ ++ A
Sbjct: 170 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++APE T SDV+S+G+ L EL S
Sbjct: 227 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT Y+AP L D ++ GV++
Sbjct: 173 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
E+ +G
Sbjct: 229 YEMAAG 234
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 341 NGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDL 400
N ++++K SK D FK+E++II +K+ + G T + I+ +
Sbjct: 77 NNDKISIK-----SKYDD--FKNELQIITDIKNEYCLTCEGIITNY-----DEVYIIYEY 124
Query: 401 LHNGSL--YDHLFGSGMKKLSWPIRLR----IALGTARGLAYLHYGVQPAIIHRDIKASN 454
+ N S+ +D F K + I ++ I +Y+H + I HRD+K SN
Sbjct: 125 MENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSN 182
Query: 455 ILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGS--DVYSFG 512
IL+D+ K+ DFG +++ + GT ++ PE+ G+ D++S G
Sbjct: 183 ILMDKNGRVKLSDFGESEY---MVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLG 239
Query: 513 VVL 515
+ L
Sbjct: 240 ICL 242
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 107/253 (42%), Gaps = 29/253 (11%)
Query: 276 TRSKKSEERVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVY 335
R +S E K DN+ ++L + + EE+ AT +G+G +G V+
Sbjct: 38 ARGSRSREPSPKTEDNE--GVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVH 91
Query: 336 KGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQR 394
+ G + AVK+ + + E+ A + +V L G EG
Sbjct: 92 RMEDKQTGFQCAVKKVRL-----EVFRAEELMACAGLTSPRIVPLYGAVR-----EGPWV 141
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTA-RGLAYLHYGVQPAIIHRDIKAS 453
I +LL GSL + G R LG A GL YLH I+H D+KA
Sbjct: 142 NIFMELLEGGSLGQLVKEQGCLPED---RALYYLGQALEGLEYLH---SRRILHGDVKAD 195
Query: 454 NILL-DEAFEAKVGDFGLAK-FNPEGITH--LTTR-VAGTLGYVAPEYALYGKLTPGSDV 508
N+LL + A + DFG A P+G+ LT + GT ++APE L DV
Sbjct: 196 NVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDV 255
Query: 509 YSFGVVLLELLSG 521
+S ++L +L+G
Sbjct: 256 WSSCCMMLHMLNG 268
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 430 TARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG-T 488
A+G+A+L IHRD+ A NILL K+ DFGLA+ ++ A
Sbjct: 172 VAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 489 LGYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
+ ++APE T SDV+S+G+ L EL S
Sbjct: 229 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG-TL 489
A+G+A+L IHRD+ A NILL K+ DFGLA+ ++ A +
Sbjct: 155 AKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 211
Query: 490 GYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
++APE T SDV+S+G+ L EL S
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 20/210 (9%)
Query: 319 NFSRENIIGKGGYGNVYKGMLPN-GTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
N+ + +GKG + V + + G E A K K S + E I ++H N
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 65
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L E +V DL+ G L++ + S +A
Sbjct: 66 IVRLHDSIQ-----EESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESIA 118
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLA-KFNPEGITHLTTRVAGTLGY 491
Y H I+HR++K N+LL + K+ DFGLA + N H AGT GY
Sbjct: 119 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGY 172
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
++PE + D+++ GV+L LL G
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 107/253 (42%), Gaps = 29/253 (11%)
Query: 276 TRSKKSEERVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVY 335
R +S E K DN+ ++L + + EE+ AT +G+G +G V+
Sbjct: 57 ARGSRSREPSPKTEDNE--GVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVH 110
Query: 336 KGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQR 394
+ G + AVK+ + + E+ A + +V L G EG
Sbjct: 111 RMEDKQTGFQCAVKKVRL-----EVFRAEELMACAGLTSPRIVPLYGAVR-----EGPWV 160
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTA-RGLAYLHYGVQPAIIHRDIKAS 453
I +LL GSL + G R LG A GL YLH I+H D+KA
Sbjct: 161 NIFMELLEGGSLGQLVKEQGCLPED---RALYYLGQALEGLEYLH---SRRILHGDVKAD 214
Query: 454 NILL-DEAFEAKVGDFGLAK-FNPEGITH--LTTR-VAGTLGYVAPEYALYGKLTPGSDV 508
N+LL + A + DFG A P+G+ LT + GT ++APE L DV
Sbjct: 215 NVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDV 274
Query: 509 YSFGVVLLELLSG 521
+S ++L +L+G
Sbjct: 275 WSSCCMMLHMLNG 287
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 431 ARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAG-TL 489
A+G+A+L IHRD+ A NILL K+ DFGLA+ ++ A +
Sbjct: 178 AKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 234
Query: 490 GYVAPEYALYGKLTPGSDVYSFGVVLLELLS 520
++APE T SDV+S+G+ L EL S
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 20/210 (9%)
Query: 319 NFSRENIIGKGGYGNVYKGMLPN-GTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
N+ + +GKG + V + + G E A K K S + E I ++H N
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L E +V DL+ G L++ + S +A
Sbjct: 67 IVRLHDSIQ-----EESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESIA 119
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLA-KFNPEGITHLTTRVAGTLGY 491
Y H I+HR++K N+LL + K+ DFGLA + N H AGT GY
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGY 173
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
++PE + D+++ GV+L LL G
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 326 IGKGGYGNVYKGMLP--------NGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLV 377
+G+G + ++KG+ + TEV +K + +F +++ + H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 378 ALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAY- 436
G G + I+V + + GSL +L KK I + L A+ LA
Sbjct: 76 LNYGVCVC-----GDENILVQEFVKFGSLDTYL-----KKNKNCINILWKLEVAKQLAAA 125
Query: 437 LHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEG--ITHLTTRV-AGTLGYVA 493
+H+ + +IH ++ A NILL + K G+ K + G IT L + + +V
Sbjct: 126 MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP 185
Query: 494 PEYALYGK-LTPGSDVYSFGVVLLELLSG 521
PE K L +D +SFG L E+ SG
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 86/210 (40%), Gaps = 20/210 (9%)
Query: 319 NFSRENIIGKGGYGNVYKGMLPN-GTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
N+ + +GKG + V + + G E A K K S + E I ++H N
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L E +V DL+ G L++ + S +A
Sbjct: 67 IVRLHDSIQ-----EESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESIA 119
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLA-KFNPEGITHLTTRVAGTLGY 491
Y H I+HR++K N+LL + K+ DFGLA + N H AGT GY
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGY 173
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
++PE + D+++ GV+L LL G
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 39/211 (18%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G E+ ++ + D N K E+ S++H N+V +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK----- 81
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR--------GLAYL 437
V L IV + G L++ + +G R + AR G++Y
Sbjct: 82 EVILTPTHLAIVMEYASGGELFERICNAG----------RFSEDEARFFFQQLISGVSYC 131
Query: 438 HYGVQPAIIHRDIKASNILLD--EAFEAKVGDFGLAKFNPEGITHLTTR-VAGTLGYVAP 494
H +Q + HRD+K N LLD A K+ FG +K + H + GT Y+AP
Sbjct: 132 H-AMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTPAYIAP 185
Query: 495 EYALY----GKLTPGSDVYSFGVVLLELLSG 521
E L GK+ +DV+S GV L +L G
Sbjct: 186 EVLLKKEYDGKV---ADVWSCGVTLYVMLVG 213
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 92/219 (42%), Gaps = 36/219 (16%)
Query: 324 NIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVK-HVNLVALRG 381
++G+G Y V + L NG E AVK + + + EVE + + + N++ L
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 382 YSTATVPLEGHQRI-IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYG 440
+ E R +V + L GS+ H+ K + R+ A L +LH
Sbjct: 79 F------FEDDTRFYLVFEKLQGGSILAHI--QKQKHFNEREASRVVRDVAAALDFLH-- 128
Query: 441 VQPAIIHRDIKASNILL---DEAFEAKVGDFGLA---KFN----PEGITHLTTRVAGTLG 490
I HRD+K NIL ++ K+ DF L K N P LTT G+
Sbjct: 129 -TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTT-PCGSAE 186
Query: 491 YVAPEY--------ALYGKLTPGSDVYSFGVVLLELLSG 521
Y+APE Y K D++S GVVL +LSG
Sbjct: 187 YMAPEVVEVFTDQATFYDKRC---DLWSLGVVLYIMLSG 222
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 39/211 (18%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA 385
IG G +G E+ ++ + D N K E+ S++H N+V +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK----- 81
Query: 386 TVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTAR--------GLAYL 437
V L IV + G L++ + +G R + AR G++Y
Sbjct: 82 EVILTPTHLAIVMEYASGGELFERICNAG----------RFSEDEARFFFQQLISGVSYC 131
Query: 438 HYGVQPAIIHRDIKASNILLD--EAFEAKVGDFGLAKFNPEGITHLTTR-VAGTLGYVAP 494
H +Q + HRD+K N LLD A K+ FG +K + H + GT Y+AP
Sbjct: 132 H-AMQ--VCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIAP 185
Query: 495 EYALY----GKLTPGSDVYSFGVVLLELLSG 521
E L GK+ +DV+S GV L +L G
Sbjct: 186 EVLLKKEYDGKV---ADVWSCGVTLYVMLVG 213
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNI 455
+V + + G ++ HL G + S P A YLH +I+RD+K N+
Sbjct: 118 MVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 456 LLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVL 515
L+D+ +V DFG AK + T + GT +APE L D ++ GV++
Sbjct: 173 LIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLI 228
Query: 516 LELLSG 521
E+ +G
Sbjct: 229 YEMAAG 234
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 20/210 (9%)
Query: 319 NFSRENIIGKGGYGNVYKGM-LPNGTEVAVK--RFKNCSKAGDANFKHEVEIIASVKHVN 375
N+ + +GKG + V + + G E A K K S + E I ++H N
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 89
Query: 376 LVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLA 435
+V L ++ E +V DL+ G L++ + S +A
Sbjct: 90 IVRLHD----SIQEESFH-YLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESIA 142
Query: 436 YLHYGVQPAIIHRDIKASNILLDEAFEA---KVGDFGLA-KFNPEGITHLTTRVAGTLGY 491
Y H I+HR++K N+LL + K+ DFGLA + N H AGT GY
Sbjct: 143 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGY 196
Query: 492 VAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
++PE + D+++ GV+L LL G
Sbjct: 197 LSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 10/171 (5%)
Query: 308 FKIEEIKAATMNFSRENIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVE 366
F + ++ + ++ +GG+ VY+ + +G E A+KR + + + EV
Sbjct: 18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVC 77
Query: 367 IIASVK-HVNLVALRGYSTATVPLE----GHQRIIVCDLLHNGSLYDHLFGSGMK-KLSW 420
+ + H N+V S A++ E G ++ L G L + L + LS
Sbjct: 78 FMKKLSGHPNIVQF--CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSC 135
Query: 421 PIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLA 471
L+I T R + ++H +P IIHRD+K N+LL K+ DFG A
Sbjct: 136 DTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 112/256 (43%), Gaps = 51/256 (19%)
Query: 300 SRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNV-YKGMLPNGTEVAVKRF--KNCSKA 356
SR +N+ F+ + +K ++ E I+G G G V ++G G VAVKR C A
Sbjct: 1 SRIANIPNFE-QSLKNLVVS---EKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA 55
Query: 357 GDANFKHEVEIIA-SVKHVNLVALRGYSTATVPLEGHQRIIVC-----DLLHNGSLYDHL 410
E++++ S H N++ R Y + T + + +C DL+ + ++ D
Sbjct: 56 -----LMEIKLLTESDDHPNVI--RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDE- 107
Query: 411 FGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLD------------ 458
++K PI L + A G+A+LH IIHRD+K NIL+
Sbjct: 108 -NLKLQKEYNPISLLRQI--ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTG 161
Query: 459 -EAFEAKVGDFGLAKFNPEGITHLTTRV---AGTLGYVAPE-------YALYGKLTPGSD 507
E + DFGL K G + T + +GT G+ APE +LT D
Sbjct: 162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSID 221
Query: 508 VYSFGVVLLELLSGKK 523
++S G V +LS K
Sbjct: 222 IFSMGCVFYYILSKGK 237
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 37/223 (16%)
Query: 324 NIIGKGGYGNVYKGM--LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRG 381
+ +G+G +G V + + G VAVK KN + +A + E++++ + + +
Sbjct: 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAA-RSEIQVLEHLNTTDPNSTFR 78
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRL----RIALGTARGLAYL 437
E H I + L S YD + +G P RL ++A + + +L
Sbjct: 79 CVQMLEWFEHHGHICIVFELLGLSTYDFIKENGF----LPFRLDHIRKMAYQICKSVNFL 134
Query: 438 HYGVQPAIIHRDIKASNILL-----DEAF--------------EAKVGDFGLAKFNPEGI 478
H + H D+K NIL EA+ + KV DFG A ++ E
Sbjct: 135 HSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE-- 189
Query: 479 THLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
H +T V+ T Y APE L + DV+S G +L+E G
Sbjct: 190 -HHSTLVS-TRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 326 IGKGGYGNVYKGMLPNGTEVAVKRFKNCSKAG-DANFKHEVEIIASVKHVNLVALRGYST 384
+G+G YG+VYK +G + K G + E+ ++ +KH N+++L+
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQ---- 84
Query: 385 ATVPLEGHQRIIVCDLLHNGSLYD--HL--FGSGMKKLSWPIRLRIALGTARGLAY---- 436
V L R + LL + + +D H+ F K P++L G + L Y
Sbjct: 85 -KVFLSHADRKVW--LLFDYAEHDLWHIIKFHRASKANKKPVQL--PRGMVKSLLYQILD 139
Query: 437 -LHYGVQPAIIHRDIKASNILL----DEAFEAKVGDFGLAKFNPEGITHLT--TRVAGTL 489
+HY ++HRD+K +NIL+ E K+ D G A+ + L V T
Sbjct: 140 GIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF 199
Query: 490 GYVAPEYALYGK-LTPGSDVYSFGVVLLELLSGK 522
Y APE L + T D+++ G + ELL+ +
Sbjct: 200 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 432 RGLAYLHYGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEGITHLTTRVAG--T 488
RGL Y+H ++HRD+K +N+ ++ E K+GDFGLA+ +H G T
Sbjct: 131 RGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 489 LGYVAPEYALY-GKLTPGSDVYSFGVVLLELLSGKK----ACEIIQGKSVLLS 536
Y +P L T D+++ G + E+L+GK A E+ Q + +L S
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES 240
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 23/212 (10%)
Query: 317 TMNFSRENIIGKGGYGNVYKGMLPNGT--EVAVKRFKNCSKAGDANFKHEVEIIASV-KH 373
T + + IG G Y +V K + T E AVK + + E+EI+ +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQH 75
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ L+ V +G +V +L+ G L D + K S + +
Sbjct: 76 PNIITLK-----DVYDDGKYVYVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITKT 128
Query: 434 LAYLHYGVQPAIIHRDIKASNIL-LDEAFEA---KVGDFGLAKFNPEGITHLTTRVAGTL 489
+ YLH ++HRD+K SNIL +DE+ ++ DFG AK L T
Sbjct: 129 VEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENGLLMTPCYTA 184
Query: 490 GYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
+VAPE D++S GV+L +L+G
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKH-VNLVALRGYS 383
IG G +G +Y G + EVA+K +N K +E +I ++ + +R +
Sbjct: 15 IGSGSFGEIYLGTNIQTNEEVAIK-LENV-KTKHPQLLYESKIYRILQGGTGIPNVRWFG 72
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQP 443
+EG ++V DLL G + LF +KLS L +A + ++H
Sbjct: 73 -----VEGDYNVLVMDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SK 122
Query: 444 AIIHRDIKASNILLD---EAFEAKVGDFGLAKFNPEGITHL------TTRVAGTLGYVAP 494
+ +HRDIK N L+ A + + DFGLAK + TH + GT Y +
Sbjct: 123 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASV 182
Query: 495 EYALYGKLTPGSDVYSFGVVLLELLSG 521
L + + D+ S G VL+ L G
Sbjct: 183 NTHLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 10/131 (7%)
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASN 454
+IV + L G L+ + G + + I + YLH I HRD+K N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 145
Query: 455 ILLDEAFE---AKVGDFGLAKFNPEGITHLT-TRVAGTLGYVAPEYALYGKLTPGSDVYS 510
+L K+ DFG AK E +H + T T YVAPE K D++S
Sbjct: 146 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWS 202
Query: 511 FGVVLLELLSG 521
GV++ LL G
Sbjct: 203 LGVIMYILLCG 213
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 434 LAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLG--- 490
LA+LH ++H D+K +NI L K+GDFGL + L T AG +
Sbjct: 170 LAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGL-------LVELGTAGAGEVQEGD 219
Query: 491 --YVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKAC--EIIQGKSVLLSDWAWELVKEG 546
Y+APE L G +DV+S G+ +LE+ AC E+ G W+ +++G
Sbjct: 220 PRYMAPEL-LQGSYGTAADVFSLGLTILEV-----ACNMELPHGGE------GWQQLRQG 267
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 112/253 (44%), Gaps = 47/253 (18%)
Query: 299 ESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNV-YKGMLPNGTEVAVKRF--KNCSK 355
+SR +N+ F+ + +K ++ E I+G G G V ++G G VAVKR C
Sbjct: 18 KSRIANIPNFE-QSLKNLVVS---EKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDI 72
Query: 356 AGDANFKHEVEIIA-SVKHVNLVALRGYSTATVPLEGHQRIIVC-----DLLHNGSLYDH 409
A E++++ S H N++ R Y + T + + +C DL+ + ++ D
Sbjct: 73 A-----LMEIKLLTESDDHPNVI--RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDE 125
Query: 410 LFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLD----------- 458
++K PI L + A G+A+LH IIHRD+K NIL+
Sbjct: 126 --NLKLQKEYNPISLLRQI--ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQT 178
Query: 459 --EAFEAKVGDFGLAKFNPEGITHLTTRV---AGTLGYVAPEY---ALYGKLTPGSDVYS 510
E + DFGL K G + +GT G+ APE + +LT D++S
Sbjct: 179 GAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFS 238
Query: 511 FGVVLLELLSGKK 523
G V +LS K
Sbjct: 239 MGCVFYYILSKGK 251
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 89/216 (41%), Gaps = 34/216 (15%)
Query: 324 NIIGKGGYGNVYKGM-LPNGTEVAVK-----RFKNCSKAGDANFKHEVEIIASVKHVNLV 377
+IGKG + V + + G + AVK +F + + K E I +KH ++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 378 AL-RGYSTATVPLEGHQRIIVCDLLHN-------GSLYDHLFGSG-MKKLSWPIRLRIAL 428
L YS+ + + + DL G +Y S M+++
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI---------- 139
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILL---DEAFEAKVGDFGLAKFNPEGITHLTTRV 485
L L Y IIHRD+K N+LL + + K+GDFG+A E RV
Sbjct: 140 -----LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV 194
Query: 486 AGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
GT ++APE DV+ GV+L LLSG
Sbjct: 195 -GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASN 454
+IV + L G L+ + G + + I + YLH I HRD+K N
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 152
Query: 455 ILLDEAFE---AKVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPEYALYGKLTPGSDVY 509
+L K+ DFG AK E +H LTT T YVAPE K D++
Sbjct: 153 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 208
Query: 510 SFGVVLLELLSG 521
S GV++ LL G
Sbjct: 209 SLGVIMYILLCG 220
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASN 454
+IV + L G L+ + G + + I + YLH I HRD+K N
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 153
Query: 455 ILLDEAFE---AKVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPEYALYGKLTPGSDVY 509
+L K+ DFG AK E +H LTT T YVAPE K D++
Sbjct: 154 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 209
Query: 510 SFGVVLLELLSG 521
S GV++ LL G
Sbjct: 210 SLGVIMYILLCG 221
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 21/160 (13%)
Query: 324 NIIGKGGYGNVYKG-MLPNGTEVAVKRFKNCS--KAGDANFKHEVEIIASVKHVNLVALR 380
+I+G+G NV++G G A+K F N S + D + E E++ + H N+V L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR-EFEVLKKLNHKNIVKLF 73
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHLF----GSGMKKLSWPIRLRIALGTARGLAY 436
T ++++ + GSLY L G+ + + I LR +G G+ +
Sbjct: 74 AIEEETTT---RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG---GMNH 127
Query: 437 LHYGVQPAIIHRDIKASNILL----DEAFEAKVGDFGLAK 472
L + I+HR+IK NI+ D K+ DFG A+
Sbjct: 128 LR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASN 454
+IV + L G L+ + G + + I + YLH I HRD+K N
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 151
Query: 455 ILLDEAFE---AKVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPEYALYGKLTPGSDVY 509
+L K+ DFG AK E +H LTT T YVAPE K D++
Sbjct: 152 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 207
Query: 510 SFGVVLLELLSG 521
S GV++ LL G
Sbjct: 208 SLGVIMYILLCG 219
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASN 454
+IV + L G L+ + G + + I + YLH I HRD+K N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 147
Query: 455 ILLDEAFE---AKVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPEYALYGKLTPGSDVY 509
+L K+ DFG AK E +H LTT T YVAPE K D++
Sbjct: 148 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 203
Query: 510 SFGVVLLELLSG 521
S GV++ LL G
Sbjct: 204 SLGVIMYILLCG 215
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASN 454
+IV + L G L+ + G + + I + YLH I HRD+K N
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 191
Query: 455 ILLDEAFEA---KVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPEYALYGKLTPGSDVY 509
+L K+ DFG AK E +H LTT T YVAPE K D++
Sbjct: 192 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 247
Query: 510 SFGVVLLELLSG 521
S GV++ LL G
Sbjct: 248 SLGVIMYILLCG 259
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 112/253 (44%), Gaps = 47/253 (18%)
Query: 299 ESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNV-YKGMLPNGTEVAVKRF--KNCSK 355
+SR +N+ F+ + +K ++ E I+G G G V ++G G VAVKR C
Sbjct: 18 KSRIANIPNFE-QSLKNLVVS---EKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDI 72
Query: 356 AGDANFKHEVEIIA-SVKHVNLVALRGYSTATVPLEGHQRIIVC-----DLLHNGSLYDH 409
A E++++ S H N++ R Y + T + + +C DL+ + ++ D
Sbjct: 73 A-----LMEIKLLTESDDHPNVI--RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDE 125
Query: 410 LFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLD----------- 458
++K PI L + A G+A+LH IIHRD+K NIL+
Sbjct: 126 --NLKLQKEYNPISLLRQI--ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQT 178
Query: 459 --EAFEAKVGDFGLAKFNPEGITHLTTRV---AGTLGYVAPEY---ALYGKLTPGSDVYS 510
E + DFGL K G + +GT G+ APE + +LT D++S
Sbjct: 179 GAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFS 238
Query: 511 FGVVLLELLSGKK 523
G V +LS K
Sbjct: 239 MGCVFYYILSKGK 251
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASN 454
+IV + L G L+ + G + + I + YLH I HRD+K N
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 146
Query: 455 ILLDEAFE---AKVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPEYALYGKLTPGSDVY 509
+L K+ DFG AK E +H LTT T YVAPE K D++
Sbjct: 147 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 202
Query: 510 SFGVVLLELLSG 521
S GV++ LL G
Sbjct: 203 SLGVIMYILLCG 214
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASN 454
+IV + L G L+ + G + + I + YLH I HRD+K N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 145
Query: 455 ILLDEAFE---AKVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPEYALYGKLTPGSDVY 509
+L K+ DFG AK E +H LTT T YVAPE K D++
Sbjct: 146 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 201
Query: 510 SFGVVLLELLSG 521
S GV++ LL G
Sbjct: 202 SLGVIMYILLCG 213
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASN 454
+IV + L G L+ + G + + I + YLH I HRD+K N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 147
Query: 455 ILLDEAFEA---KVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPEYALYGKLTPGSDVY 509
+L K+ DFG AK E +H LTT T YVAPE K D++
Sbjct: 148 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 203
Query: 510 SFGVVLLELLSG 521
S GV++ LL G
Sbjct: 204 SLGVIMYILLCG 215
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASN 454
+IV + L G L+ + G + + I + YLH I HRD+K N
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 161
Query: 455 ILLDEAFEA---KVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPEYALYGKLTPGSDVY 509
+L K+ DFG AK E +H LTT T YVAPE K D++
Sbjct: 162 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 217
Query: 510 SFGVVLLELLSG 521
S GV++ LL G
Sbjct: 218 SLGVIMYILLCG 229
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASN 454
+IV + L G L+ + G + + I + YLH I HRD+K N
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 197
Query: 455 ILLDEAFEA---KVGDFGLAKFNPEGITH--LTTRVAGTLGYVAPEYALYGKLTPGSDVY 509
+L K+ DFG AK E +H LTT T YVAPE K D++
Sbjct: 198 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCY-TPYYVAPEVLGPEKYDKSCDMW 253
Query: 510 SFGVVLLELLSG 521
S GV++ LL G
Sbjct: 254 SLGVIMYILLCG 265
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 21/160 (13%)
Query: 324 NIIGKGGYGNVYKGM-LPNGTEVAVKRFKNCS--KAGDANFKHEVEIIASVKHVNLVALR 380
+I+G+G NV++G G A+K F N S + D + E E++ + H N+V L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR-EFEVLKKLNHKNIVKLF 73
Query: 381 GYSTATVPLEGHQRIIVCDLLHNGSLYDHL----FGSGMKKLSWPIRLRIALGTARGLAY 436
T ++++ + GSLY L G+ + + I LR +G G+ +
Sbjct: 74 AIEEETTT---RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG---GMNH 127
Query: 437 LHYGVQPAIIHRDIKASNILL----DEAFEAKVGDFGLAK 472
L + I+HR+IK NI+ D K+ DFG A+
Sbjct: 128 LR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 23/202 (11%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKH-VNLVALRGYS 383
IG G +G++Y G + G EVA+K C K E +I ++ V + +R
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIKL--ECVKTKHPQLHIESKIYKMMQGGVGIPTIR--- 71
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQP 443
EG ++V +LL G + LF +K S L +A + Y+H
Sbjct: 72 --WCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SK 124
Query: 444 AIIHRDIKASNILLDEAFEAK---VGDFGLAKFNPEGITHL------TTRVAGTLGYVAP 494
IHRD+K N L+ + + DFGLAK + TH + GT Y +
Sbjct: 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 184
Query: 495 EYALYGKLTPGSDVYSFGVVLL 516
L + + D+ S G VL+
Sbjct: 185 NTHLGIEQSRRDDLESLGYVLM 206
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 23/202 (11%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKH-VNLVALRGYS 383
IG G +G++Y G + G EVA+K C K E +I ++ V + +R
Sbjct: 15 IGSGSFGDIYLGTDIAAGEEVAIKL--ECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCG 72
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQP 443
EG ++V +LL G + LF +K S L +A + Y+H
Sbjct: 73 A-----EGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SK 122
Query: 444 AIIHRDIKASNILLDEAFEAK---VGDFGLAKFNPEGITHL------TTRVAGTLGYVAP 494
IHRD+K N L+ + + DFGLAK + TH + GT Y +
Sbjct: 123 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 182
Query: 495 EYALYGKLTPGSDVYSFGVVLL 516
L + + D+ S G VL+
Sbjct: 183 NTHLGIEQSRRDDLESLGYVLM 204
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 113/254 (44%), Gaps = 44/254 (17%)
Query: 283 ERVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGM-LPN 341
+R+ T+++E L+ E ++ EE+ T + +G+G +G V++
Sbjct: 44 QRLGPETEDNEGVLLTEKLKPVDYEYR-EEVHWMT----HQPRVGRGSFGEVHRMKDKQT 98
Query: 342 GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA-TVPLEGHQRI----- 395
G + AVK+ + + + LVA G S+ VPL G R
Sbjct: 99 GFQCAVKKVR----------------LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVN 142
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSW--PIRLRIALGTA-RGLAYLHYGVQPAIIHRDIKA 452
I +LL GSL G +K++ R LG A GL YLH I+H D+KA
Sbjct: 143 IFMELLEGGSL-----GQLIKQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKA 194
Query: 453 SNILL-DEAFEAKVGDFGLAK-FNPEGI--THLTTR-VAGTLGYVAPEYALYGKLTPGSD 507
N+LL + A + DFG A P+G+ + LT + GT ++APE + D
Sbjct: 195 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 254
Query: 508 VYSFGVVLLELLSG 521
++S ++L +L+G
Sbjct: 255 IWSSCCMMLHMLNG 268
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 37/223 (16%)
Query: 324 NIIGKGGYGNVYKGM--LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRG 381
+ +G+G +G V + + G VAVK KN + +A + E++++ + + +
Sbjct: 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAA-RSEIQVLEHLNTTDPNSTFR 78
Query: 382 YSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRL----RIALGTARGLAYL 437
E H I + L S YD + +G P RL ++A + + +L
Sbjct: 79 CVQMLEWFEHHGHICIVFELLGLSTYDFIKENGF----LPFRLDHIRKMAYQICKSVNFL 134
Query: 438 HYGVQPAIIHRDIKASNILL-----DEAF--------------EAKVGDFGLAKFNPEGI 478
H + H D+K NIL EA+ + KV DFG A ++ E
Sbjct: 135 HSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE-- 189
Query: 479 THLTTRVAGTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
H +T V Y APE L + DV+S G +L+E G
Sbjct: 190 -HHSTLVXXR-HYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 114/254 (44%), Gaps = 44/254 (17%)
Query: 283 ERVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGM-LPN 341
+R+ T+++E L+ E ++ EE+ T + +G+G +G V++
Sbjct: 28 QRLGPETEDNEGVLLTEKLKPVDYEYR-EEVHWMT----HQPRVGRGSFGEVHRMKDKQT 82
Query: 342 GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA-TVPLEGHQRI----- 395
G + AVK+ + +E+ + LVA G S+ VPL G R
Sbjct: 83 GFQCAVKKVR-------------LEVF---RVEELVACAGLSSPRIVPLYGAVREGPWVN 126
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSW--PIRLRIALGTA-RGLAYLHYGVQPAIIHRDIKA 452
I +LL GSL G +K++ R LG A GL YLH I+H D+KA
Sbjct: 127 IFMELLEGGSL-----GQLIKQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKA 178
Query: 453 SNILL-DEAFEAKVGDFGLAK-FNPEGITH--LTTR-VAGTLGYVAPEYALYGKLTPGSD 507
N+LL + A + DFG A P+G+ LT + GT ++APE + D
Sbjct: 179 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 238
Query: 508 VYSFGVVLLELLSG 521
++S ++L +L+G
Sbjct: 239 IWSSCCMMLHMLNG 252
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 23/234 (9%)
Query: 297 VLESRSSNLARFKIEEIKAATM--NFSRENIIGKGGYGNVYKGMLPNGTE-VAVKRFK-- 351
LE+++ + +AT + R +G+G YG VYK + E VA+KR +
Sbjct: 11 TLEAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLE 70
Query: 352 NCSKAGDANFKHEVEIIASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLF 411
+ + EV ++ ++H N++ L+ +V H+ ++ + N L ++
Sbjct: 71 HEEEGVPGTAIREVSLLKELQHRNIIELK-----SVIHHNHRLHLIFEYAEN-DLKKYM- 123
Query: 412 GSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILL--DEAFEA---KVG 466
+S + G+ + H +HRD+K N+LL +A E K+G
Sbjct: 124 -DKNPDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIG 179
Query: 467 DFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGS-DVYSFGVVLLELL 519
DFGLA+ I T + TL Y PE L + S D++S + E+L
Sbjct: 180 DFGLARAFGIPIRQFTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 112/254 (44%), Gaps = 44/254 (17%)
Query: 283 ERVVKVTDNDEPSLVLESRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGM-LPN 341
+R+ T+++E L+ E ++ EE+ T + +G+G +G V++
Sbjct: 42 QRLGPETEDNEGVLLTEKLKPVDYEYR-EEVHWMT----HQPRLGRGSFGEVHRMKDKQT 96
Query: 342 GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYSTA-TVPLEGHQRI----- 395
G + AVK+ + + + LVA G S+ VPL G R
Sbjct: 97 GFQCAVKKVR----------------LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVN 140
Query: 396 IVCDLLHNGSLYDHLFGSGMKKLSW--PIRLRIALGTA-RGLAYLHYGVQPAIIHRDIKA 452
I +LL GSL G +K++ R LG A GL YLH I+H D+KA
Sbjct: 141 IFMELLEGGSL-----GQLIKQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKA 192
Query: 453 SNILL-DEAFEAKVGDFGLAK-FNPEGITH--LTTR-VAGTLGYVAPEYALYGKLTPGSD 507
N+LL + A + DFG A P+G+ LT + GT ++APE + D
Sbjct: 193 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVD 252
Query: 508 VYSFGVVLLELLSG 521
++S ++L +L+G
Sbjct: 253 IWSSCCMMLHMLNG 266
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 23/212 (10%)
Query: 317 TMNFSRENIIGKGGYGNVYKGMLPNGT--EVAVKRFKNCSKAGDANFKHEVEIIASV-KH 373
T + + IG G Y +V K + T E AVK + + E+EI+ +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIIDKSKR----DPTEEIEILLRYGQH 75
Query: 374 VNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARG 433
N++ L+ V +G +V +L G L D + K S + +
Sbjct: 76 PNIITLK-----DVYDDGKYVYVVTELXKGGELLDKILR--QKFFSEREASAVLFTITKT 128
Query: 434 LAYLHYGVQPAIIHRDIKASNIL-LDEAFEA---KVGDFGLAKFNPEGITHLTTRVAGTL 489
+ YLH ++HRD+K SNIL +DE+ ++ DFG AK L T
Sbjct: 129 VEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENGLLXTPCYTA 184
Query: 490 GYVAPEYALYGKLTPGSDVYSFGVVLLELLSG 521
+VAPE D++S GV+L L+G
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 13/201 (6%)
Query: 325 IIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
+IGKG +G V K VA+K +N K E+ I+ ++ +
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRN-EKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQP 443
I + L + +LY+ + + + S P+ + A + L LH +
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KN 219
Query: 444 AIIHRDIKASNILLDEAFEA--KVGDFGLAKFNPEGI-THLTTRVAGTLGYVAPEYALYG 500
IIH D+K NILL + + KV DFG + + + + T + +R Y APE L
Sbjct: 220 RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILGA 274
Query: 501 KLTPGSDVYSFGVVLLELLSG 521
+ D++S G +L ELL+G
Sbjct: 275 RYGMPIDMWSLGCILAELLTG 295
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 110/256 (42%), Gaps = 51/256 (19%)
Query: 300 SRSSNLARFKIEEIKAATMNFSRENIIGKGGYGNV-YKGMLPNGTEVAVKRF--KNCSKA 356
SR +N+ F+ + +K ++ E I+G G G V ++G G VAVKR C A
Sbjct: 1 SRIANIPNFE-QSLKNLVVS---EKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA 55
Query: 357 GDANFKHEVEIIA-SVKHVNLVALRGYSTATVPLEGHQRIIVC-----DLLHNGSLYDHL 410
E++++ S H N++ R Y + T + + +C DL+ + ++ D
Sbjct: 56 -----LMEIKLLTESDDHPNVI--RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDE- 107
Query: 411 FGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASNILLD------------ 458
++K PI L + A G+A+LH IIHRD+K NIL+
Sbjct: 108 -NLKLQKEYNPISLLRQI--ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTG 161
Query: 459 -EAFEAKVGDFGLAKFNPEGITHLTTRV---AGTLGYVAPE-------YALYGKLTPGSD 507
E + DFGL K G + +GT G+ APE +LT D
Sbjct: 162 AENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSID 221
Query: 508 VYSFGVVLLELLSGKK 523
++S G V +LS K
Sbjct: 222 IFSMGCVFYYILSKGK 237
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 84/202 (41%), Gaps = 23/202 (11%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGY-S 383
IG G +G++Y G + +G EVA+K C K KH I S + + G S
Sbjct: 17 IGSGSFGDIYLGANIASGEEVAIKL--ECVKT-----KHPQLHIESKFYKMMQGGVGIPS 69
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQP 443
EG ++V +LL G + LF +K S L +A + Y+H
Sbjct: 70 IKWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SK 124
Query: 444 AIIHRDIKASNILLDEAFEAK---VGDFGLAKFNPEGITHL------TTRVAGTLGYVAP 494
IHRD+K N L+ + + DFGLAK + TH + GT Y +
Sbjct: 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 184
Query: 495 EYALYGKLTPGSDVYSFGVVLL 516
L + + D+ S G VL+
Sbjct: 185 NTHLGIEQSRRDDLESLGYVLM 206
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 314 KAATMNFSRENIIGK---GGYGNVYKGMLPNGTEVAVK--RFKNCSKAGDANFKHEVEII 368
K + ++F + N + K G ++KG G ++ VK + ++ S +F E +
Sbjct: 3 KHSGIDFKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRL 61
Query: 369 ASVKHVNLVALRGYSTATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIAL 428
H N++ + G + P H +I GSLY+ L + ++ AL
Sbjct: 62 RIFSHPNVLPVLGACQS--PPAPHPTLIT-HWXPYGSLYNVLHEGTNFVVDQSQAVKFAL 118
Query: 429 GTARGLAYLHYGVQPAIIHRDIKASNILLDEAFEAKVGDFGLA-KFNPEGITHLTTRVAG 487
ARG A+LH ++P I + + ++ +DE A++ + F G +
Sbjct: 119 DXARGXAFLHT-LEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAP----- 172
Query: 488 TLGYVAPEYALYGKLTP----GSDVYSFGVVLLELLS 520
+VAPE AL K +D +SF V+L EL++
Sbjct: 173 --AWVAPE-ALQKKPEDTNRRSADXWSFAVLLWELVT 206
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 13/201 (6%)
Query: 325 IIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
+IGKG +G V K VA+K +N K E+ I+ ++ +
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRN-EKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQP 443
I + L + +LY+ + + + S P+ + A + L LH +
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KN 219
Query: 444 AIIHRDIKASNILLDEAFEA--KVGDFGLAKFNPEGI-THLTTRVAGTLGYVAPEYALYG 500
IIH D+K NILL + + KV DFG + + + + T + +R Y APE L
Sbjct: 220 RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILGA 274
Query: 501 KLTPGSDVYSFGVVLLELLSG 521
+ D++S G +L ELL+G
Sbjct: 275 RYGMPIDMWSLGCILAELLTG 295
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 10/131 (7%)
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASN 454
+IV + L G L+ + G + + I + YLH I HRD+K N
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLH---SINIAHRDVKPEN 191
Query: 455 ILLDEAFEA---KVGDFGLAKFNPEGITHLT-TRVAGTLGYVAPEYALYGKLTPGSDVYS 510
+L K+ DFG AK E +H + T T YVAPE K D +S
Sbjct: 192 LLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWS 248
Query: 511 FGVVLLELLSG 521
GV+ LL G
Sbjct: 249 LGVIXYILLCG 259
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 447 HRDIKASNILLDEAFEAKVGDFGLAK-FNPEGITHLTTRVAGTLGYVAPEYALYGKLTPG 505
HRD+K NIL+ A + DFG+A E +T L V GTL Y APE T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 506 SDVYSFGVVLLELLSG 521
+D+Y+ VL E L+G
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLD------EAFEAKVGDFGLAKFNPEGITHLTTRVA 486
GL Y+H + IIH DIK N+L++ + K+ D G A + E H T +
Sbjct: 143 GLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE---HYTNSIQ 197
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSD 537
T Y +PE L G+D++S ++ EL++G E +G S D
Sbjct: 198 -TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLD------EAFEAKVGDFGLAKFNPEGITHLTTRVA 486
GL Y+H + IIH DIK N+L++ + K+ D G A + E H T +
Sbjct: 143 GLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE---HYTNSIQ 197
Query: 487 GTLGYVAPEYALYGKLTPGSDVYSFGVVLLELLSGKKACEIIQGKSVLLSD 537
T Y +PE L G+D++S ++ EL++G E +G S D
Sbjct: 198 -TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 302 SSNLARFKIEEIKAATMNFSRENIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDAN 360
S N A E + F E + G+G +G V G + G VA+K+ D
Sbjct: 7 SLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-----IQDPR 61
Query: 361 FKH-EVEI---IASVKHVNLVALRGYSTATVPLEGHQRII--------VCDLLHN--GSL 406
F++ E++I +A + H N+V L+ Y E +R I V D LH +
Sbjct: 62 FRNRELQIMQDLAVLHHPNIVQLQSYFYTLG--ERDRRDIYLNVVMEYVPDTLHRCCRNY 119
Query: 407 YDHLFGSGMKKLSWPIRLRIAL-GTARGLAYLHYGVQPAI--IHRDIKASNILLDEAFEA 463
Y PI +++ L R + LH P++ HRDIK N+L++EA
Sbjct: 120 YRRQVAPP------PILIKVFLFQLIRSIGCLHL---PSVNVCHRDIKPHNVLVNEADGT 170
Query: 464 -KVGDFGLA-KFNPE--GITHLTTRVAGTLGYVAPEYALYGK--LTPGSDVYSFGVVLLE 517
K+ DFG A K +P + ++ +R Y APE ++G T D++S G + E
Sbjct: 171 LKLCDFGSAKKLSPSEPNVAYICSRY-----YRAPEL-IFGNQHYTTAVDIWSVGCIFAE 224
Query: 518 LLSGK 522
++ G+
Sbjct: 225 MMLGE 229
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 33/225 (14%)
Query: 325 IIGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
++G GG+G+VY G+ + + VA+K + + + + V + V+ G+S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS-SGFS 73
Query: 384 TATVPLEGHQR-----IIVCDLLHNGSLYDHLFGSGM------KKLSWPIRLRIALGTAR 432
L+ +R +I+ + L+D + G + W +
Sbjct: 74 GVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV---------- 123
Query: 433 GLAYLHYGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGY 491
L + + ++HRDIK NIL+D E K+ DFG + + T GT Y
Sbjct: 124 -LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVY 179
Query: 492 VAPEYALYGKLTPGS-DVYSFGVVLLELLSG----KKACEIIQGK 531
PE+ Y + S V+S G++L +++ G + EII+G+
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 224
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 22/228 (9%)
Query: 326 IGKGG--YGNVYKGMLPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYS 383
+G+GG Y ++ +G L +G A+KR + + E ++ H N++ L Y
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 384 TATVPLEGHQRIIVCDLLHNGSLYDHL--FGSGMKKLSWPIRLRIALGTARGLAYLHYGV 441
+ H+ ++ G+L++ + L+ L + LG RGL +H
Sbjct: 96 LRERGAK-HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH--- 151
Query: 442 QPAIIHRDIKASNILLDEAFEAKVGDFG---LAKFNPEGITHLTTRVAG-----TLGYVA 493
HRD+K +NILL + + + D G A + EG T T+ Y A
Sbjct: 152 AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 494 PEY---ALYGKLTPGSDVYSFGVVLLELLSGKKACEII--QGKSVLLS 536
PE + + +DV+S G VL ++ G+ +++ +G SV L+
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA 259
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 40/212 (18%)
Query: 326 IGKGGYGNVYKGM-LPNGTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGYST 384
+G+G Y V++ + + N +V VK K K K E++I+ + LRG
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKN---KIKREIKILEN--------LRG--- 90
Query: 385 ATVPLEGHQRIIVCDLLHN------GSLYDHLFGSGMKKL-----SWPIRLRIALGTARG 433
G I + D++ + +++H+ + K+L + IR + +
Sbjct: 91 ------GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYM-YEILKA 143
Query: 434 LAYLHYGVQPAIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYV 492
L Y H I+HRD+K N+++D E + ++ D+GLA+F G RVA +
Sbjct: 144 LDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG-QEYNVRVASRY-FK 198
Query: 493 APEYAL-YGKLTPGSDVYSFGVVLLELLSGKK 523
PE + Y D++S G +L ++ K+
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 444 AIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKL 502
++HRDIK NIL+D E K+ DFG + + T GT Y PE+ Y +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRY 233
Query: 503 TPGS-DVYSFGVVLLELLSG----KKACEIIQGK 531
S V+S G++L +++ G + EII+G+
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 267
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 444 AIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKL 502
++HRDIK NIL+D E K+ DFG + + T GT Y PE+ Y +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRY 186
Query: 503 TPGS-DVYSFGVVLLELLSG----KKACEIIQGK 531
S V+S G++L +++ G + EII+G+
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 220
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 13/202 (6%)
Query: 324 NIIGKGGYGNVYKGMLPN-GTEVAVKRFKNCSKAGDANFKHEVEIIASVKHVNLVALRGY 382
+IGKG +G V K VA+K +N K E+ I+ ++ +
Sbjct: 103 KVIGKGXFGQVVKAYDHKVHQHVALKMVRN-EKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 383 STATVPLEGHQRIIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQ 442
I + L + +LY+ + + + S P+ + A + L LH +
Sbjct: 162 IHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---K 218
Query: 443 PAIIHRDIKASNILLDEAFEA--KVGDFGLAKFNPEGI-THLTTRVAGTLGYVAPEYALY 499
IIH D+K NILL + + KV DFG + + + + + +R Y APE L
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRF-----YRAPEVILG 273
Query: 500 GKLTPGSDVYSFGVVLLELLSG 521
+ D++S G +L ELL+G
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 9/130 (6%)
Query: 395 IIVCDLLHNGSLYDHLFGSGMKKLSWPIRLRIALGTARGLAYLHYGVQPAIIHRDIKASN 454
+I+ + + G L+ + G + + I + +LH I HRD+K N
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPEN 139
Query: 455 ILL---DEAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKLTPGSDVYSF 511
+L ++ K+ DFG AK E + T YVAPE K D++S
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSL 196
Query: 512 GVVLLELLSG 521
GV++ LL G
Sbjct: 197 GVIMYILLCG 206
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 444 AIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKL 502
++HRDIK NIL+D E K+ DFG + + T GT Y PE+ Y +
Sbjct: 133 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRY 189
Query: 503 TPGS-DVYSFGVVLLELLSG----KKACEIIQGK 531
S V+S G++L +++ G + EII+G+
Sbjct: 190 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 223
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 444 AIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKL 502
++HRDIK NIL+D E K+ DFG + + T GT Y PE+ Y +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRY 186
Query: 503 TPGS-DVYSFGVVLLELLSG----KKACEIIQGK 531
S V+S G++L +++ G + EII+G+
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 220
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 444 AIIHRDIKASNILLD-EAFEAKVGDFGLAKFNPEGITHLTTRVAGTLGYVAPEYALYGKL 502
++HRDIK NIL+D E K+ DFG + + T GT Y PE+ Y +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRY 218
Query: 503 TPGS-DVYSFGVVLLELLSG----KKACEIIQGK 531
S V+S G++L +++ G + EII+G+
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 252
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,194,645
Number of Sequences: 62578
Number of extensions: 627719
Number of successful extensions: 3904
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 1611
Number of HSP's gapped (non-prelim): 1218
length of query: 614
length of database: 14,973,337
effective HSP length: 105
effective length of query: 509
effective length of database: 8,402,647
effective search space: 4276947323
effective search space used: 4276947323
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)