Citrus Sinensis ID: 043270

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-----
VTKNELDLSLYSLSSKTSRYSLFVHNRLTVYGIRLAACMLPLQPKFKFLNIRYTAYEIRIAVYTPEAYCPTTGLPFVRIRLAAFNSDRFCPTSGLPIFHIRQVDEEDIKNLVHLQAILKEAFRLYPAVPFLVPHESMEECTINGYHVPARTQLFINAWKIQRDPSVWEEPSKFQPERFLTRHKDIYVKGQNFELLPFSSGRRMCPRVSFSLQVMQFTLASLLQGFDFATRSNEPVDMGEGLGLTMEKSQSFEVLVTPCLSAAFYD
ccHHHHHHHHHHcccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccEEccEEcccccEEEEEEEEccccccccccccccccccccccccccccccccccEEccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEEEcccccccc
ccHHHHHHHHHHHHHcccHHHHHcccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccEEcHccHcccHHHHHHHHHHHHHcccccccccccccccEEEccEEcccccEEEEEEEEEcccccccccccccccHHHcccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEccccEEEEEcccccHHHcc
vtkneldlslyslssktsryslfVHNRLTVYGIRLAacmlplqpkfkflNIRYTAYEIRIAvytpeaycpttglpfVRIRLAafnsdrfcptsglpifhirqVDEEDIKNLVHLQAILKEAFRlypavpflvphesmeectingyhvpartQLFINAwkiqrdpsvweepskfqperfltrhkdiyvkgqnfellpfssgrrmcprvsFSLQVMQFTLASLLQgfdfatrsnepvdmgeglgltmeksQSFEVLVTPclsaafyd
vtkneldlslyslssktsryslFVHNRLTVYGIRLAACMLPLQPKFKFLNIRYTAYEIRIAVYTPEAYCPTTGLPFVRIRLAAFNSDRFCPTSGLPIFHIRQVDEEDIKNLVHLQAILKEAFRLYPAVPFLVPHESMEECTINGYHVPARTQLFINAWKIQRDPSVWEEPSKFQPERFLTRHKDIYVKGQNfellpfssgrRMCPRVSFSLQVMQFTLASLLQGFDFATRSNEPVDMGEGLGLTMEKSQSFEVLVTPCLSAAFYD
VTKNELDLSLYSLSSKTSRYSLFVHNRLTVYGIRLAACMLPLQPKFKFLNIRYTAYEIRIAVYTPEAYCPTTGLPFVRIRLAAFNSDRFCPTSGLPIFHIRQVDEEDIKNLVHLQAILKEAFRLYPAVPFLVPHESMEECTINGYHVPARTQLFINAWKIQRDPSVWEEPSKFQPERFLTRHKDIYVKGQNFELLPFSSGRRMCPRVSFSLQVMQFTLASLLQGFDFATRSNEPVDMGEGLGLTMEKSQSFEVLVTPCLSAAFYD
***************KTSRYSLFVHNRLTVYGIRLAACMLPLQPKFKFLNIRYTAYEIRIAVYTPEAYCPTTGLPFVRIRLAAFNSDRFCPTSGLPIFHIRQVDEEDIKNLVHLQAILKEAFRLYPAVPFLVPHESMEECTINGYHVPARTQLFINAWKIQRDPSVWEEPSKFQPERFLTRHKDIYVKGQNFELLPFSSGRRMCPRVSFSLQVMQFTLASLLQGFDFATR**********LGL*****QSFEVLVTPCLSAAF**
**********************FVHNRLTVYGIRLAACMLPLQPKFKFLNIRYTAYEIRIAVYTPEAYCPTTGLPFVRIRLAAFNSDRFCPTSGLPIFHIRQVDEEDIKNLVHLQAILKEAFRLYPAVPFLVPHESMEECTINGYHVPARTQLFINAWKIQRDPSVWEEPSKFQPERFLTRHKDIYVKGQNFELLPFSSGRRMCPRVSFSLQVMQFTLASLLQGFDFATRSNEPVDMGEGLGLTMEKSQSFEVLVTPCLSAAFY*
VTKNELDLSLYSLSSKTSRYSLFVHNRLTVYGIRLAACMLPLQPKFKFLNIRYTAYEIRIAVYTPEAYCPTTGLPFVRIRLAAFNSDRFCPTSGLPIFHIRQVDEEDIKNLVHLQAILKEAFRLYPAVPFLVPHESMEECTINGYHVPARTQLFINAWKIQRDPSVWEEPSKFQPERFLTRHKDIYVKGQNFELLPFSSGRRMCPRVSFSLQVMQFTLASLLQGFDFATRSNEPVDMGEGLGLTMEKSQSFEVLVTPCLSAAFYD
VTKNELDLSLYSLSSKTS*******NRLTVYGIRLAACMLPLQPKFKFLNIRYTAYEIRIAVYTPEAYCPTTGLPFVRIRLAAFNSDRFCPTSGLPIFHIRQVDEEDIKNLVHLQAILKEAFRLYPAVPFLVPHESMEECTINGYHVPARTQLFINAWKIQRDPSVWEEPSKFQPERFLTRHKDIYVKGQNFELLPFSSGRRMCPRVSFSLQVMQFTLASLLQGFDFATRSNEPVDMGEGLGLTMEKSQSFEVLVTPCLSAAFY*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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VTKNELDLSLYSLSSKTSRYSLFVHNRLTVYGIRLAACMLPLQPKFKFLNIRYTAYEIRIAVYTPEAYCPTTGLPFVRIRLAAFNSDRFCPTSGLPIFHIRQVDEEDIKNLVHLQAILKEAFRLYPAVPFLVPHESMEECTINGYHVPARTQLFINAWKIQRDPSVWEEPSKFQPERFLTRHKDIYVKGQNFELLPFSSGRRMCPRVSFSLQVMQFTLASLLQGFDFATRSNEPVDMGEGLGLTMEKSQSFEVLVTPCLSAAFYD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query265 2.2.26 [Sep-21-2011]
Q9SZ46524 Cytochrome P450 82C4 OS=A yes no 0.592 0.299 0.550 4e-47
O49859525 Cytochrome P450 82A4 OS=G no no 0.618 0.312 0.530 5e-47
O49396512 Cytochrome P450 82C3 OS=A no no 0.618 0.320 0.527 2e-46
O49858527 Cytochrome P450 82A3 OS=G no no 0.615 0.309 0.527 7e-46
Q43068544 Cytochrome P450 82A1 (Fra N/A no 0.622 0.303 0.521 3e-45
O49394523 Cytochrome P450 82C2 OS=A no no 0.618 0.313 0.509 7e-45
Q9LSF8515 Cytochrome P450 82G1 OS=A no no 0.611 0.314 0.463 4e-39
O81972522 Cytochrome P450 82A2 OS=G no no 0.622 0.316 0.466 5e-38
P37118505 Cytochrome P450 71A2 OS=S N/A no 0.584 0.306 0.481 8e-38
O64638515 Cytochrome P450 76C3 OS=A no no 0.550 0.283 0.506 3e-37
>sp|Q9SZ46|C82C4_ARATH Cytochrome P450 82C4 OS=Arabidopsis thaliana GN=CYP82C4 PE=2 SV=1 Back     alignment and function desciption
 Score =  188 bits (477), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 87/158 (55%), Positives = 114/158 (72%), Gaps = 1/158 (0%)

Query: 101 RQVDEEDIKNLVHLQAILKEAFRLYPAVPFLVPHESMEECTINGYHVPARTQLFINAWKI 160
           R V++ DI+NLV+LQAI+KE  RLYPA P L P E+ME+CT+ GY+VP  T+L +N WKI
Sbjct: 359 RNVEDSDIENLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYYVPCGTRLIVNVWKI 418

Query: 161 QRDPSVWEEPSKFQPERFLTRH-KDIYVKGQNFELLPFSSGRRMCPRVSFSLQVMQFTLA 219
           QRDP V+ EP++F+PERF+T   K+  V+GQNFEL+PF SGRR CP  S ++QV+   LA
Sbjct: 419 QRDPKVYMEPNEFRPERFITGEAKEFDVRGQNFELMPFGSGRRSCPGSSLAMQVLHLGLA 478

Query: 220 SLLQGFDFATRSNEPVDMGEGLGLTMEKSQSFEVLVTP 257
             L  FD  T  + PVDM E  GLT+ K+   EVL++P
Sbjct: 479 RFLHSFDVKTVMDMPVDMSENPGLTIPKATPLEVLISP 516
Can hydroxylates 8-methoxypsoralen to form 5-hydroxy-8-methoxypsoralen in vivo and in vitro. Involved in the early iron deficiency response, possibly through an IDE1-like mediated pathway.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|O49859|C82A4_SOYBN Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1 Back     alignment and function description
>sp|O49396|C82C3_ARATH Cytochrome P450 82C3 OS=Arabidopsis thaliana GN=CYP82C3 PE=2 SV=3 Back     alignment and function description
>sp|O49858|C82A3_SOYBN Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1 Back     alignment and function description
>sp|Q43068|C82A1_PEA Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2 Back     alignment and function description
>sp|O49394|C82C2_ARATH Cytochrome P450 82C2 OS=Arabidopsis thaliana GN=CYP82C2 PE=2 SV=2 Back     alignment and function description
>sp|Q9LSF8|C82G1_ARATH Cytochrome P450 82G1 OS=Arabidopsis thaliana GN=CYP82G1 PE=1 SV=1 Back     alignment and function description
>sp|O81972|C82A2_SOYBN Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1 Back     alignment and function description
>sp|P37118|C71A2_SOLME Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1 Back     alignment and function description
>sp|O64638|C76C3_ARATH Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query265
359492645 731 PREDICTED: cytochrome P450 82A3 [Vitis v 0.622 0.225 0.630 4e-59
297739560230 unnamed protein product [Vitis vinifera] 0.618 0.713 0.585 1e-55
225448182 519 PREDICTED: cytochrome P450 82C4 [Vitis v 0.618 0.315 0.585 2e-55
147819436 462 hypothetical protein VITISV_020341 [Viti 0.618 0.354 0.585 2e-55
147853671 432 hypothetical protein VITISV_016031 [Viti 0.618 0.379 0.579 4e-55
224148856271 cytochrome P450 [Populus trichocarpa] gi 0.622 0.608 0.612 7e-55
224137298342 cytochrome P450 [Populus trichocarpa] gi 0.622 0.482 0.612 2e-54
224112939 528 cytochrome P450 [Populus trichocarpa] gi 0.622 0.312 0.612 2e-54
255538486 521 cytochrome P450, putative [Ricinus commu 0.618 0.314 0.585 3e-54
255538492 521 cytochrome P450, putative [Ricinus commu 0.618 0.314 0.585 9e-54
>gi|359492645|ref|XP_002281995.2| PREDICTED: cytochrome P450 82A3 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  234 bits (596), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 104/165 (63%), Positives = 128/165 (77%)

Query: 101 RQVDEEDIKNLVHLQAILKEAFRLYPAVPFLVPHESMEECTINGYHVPARTQLFINAWKI 160
           RQV+E D+KNL +L AI+KE  RLYPA P   PHES E+C + GYH+PA T+L  N WKI
Sbjct: 567 RQVEERDMKNLAYLNAIVKETLRLYPAGPLTAPHESTEDCLLGGYHIPAGTRLLANLWKI 626

Query: 161 QRDPSVWEEPSKFQPERFLTRHKDIYVKGQNFELLPFSSGRRMCPRVSFSLQVMQFTLAS 220
            RDPS+W +P +F+PERFLT HKD+ VKGQ+FEL+PF SGRR+CP +SF LQ MQFTLAS
Sbjct: 627 HRDPSIWSDPDEFRPERFLTTHKDVDVKGQHFELIPFGSGRRICPGISFGLQFMQFTLAS 686

Query: 221 LLQGFDFATRSNEPVDMGEGLGLTMEKSQSFEVLVTPCLSAAFYD 265
           L+QGF+FAT S+EPVDM E +GLT  K+   EVLV P LS+  Y+
Sbjct: 687 LIQGFEFATMSDEPVDMTESIGLTNLKATPLEVLVAPRLSSDLYE 731

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297739560|emb|CBI29742.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225448182|ref|XP_002264790.1| PREDICTED: cytochrome P450 82C4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147819436|emb|CAN64501.1| hypothetical protein VITISV_020341 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147853671|emb|CAN82329.1| hypothetical protein VITISV_016031 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224148856|ref|XP_002336723.1| cytochrome P450 [Populus trichocarpa] gi|222836601|gb|EEE74994.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224137298|ref|XP_002327091.1| cytochrome P450 [Populus trichocarpa] gi|222835406|gb|EEE73841.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224112939|ref|XP_002332682.1| cytochrome P450 [Populus trichocarpa] gi|222838808|gb|EEE77159.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255538486|ref|XP_002510308.1| cytochrome P450, putative [Ricinus communis] gi|223551009|gb|EEF52495.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255538492|ref|XP_002510311.1| cytochrome P450, putative [Ricinus communis] gi|223551012|gb|EEF52498.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query265
TAIR|locus:2116607524 CYP82C4 ""cytochrome P450, fam 0.592 0.299 0.550 6.4e-44
TAIR|locus:2116622512 CYP82C3 ""cytochrome P450, fam 0.618 0.320 0.527 1.7e-43
TAIR|locus:2116652523 CYP82C2 ""cytochrome P450, fam 0.618 0.313 0.509 8.4e-42
TAIR|locus:2090275515 CYP82G1 "cytochrome P450, fami 0.611 0.314 0.475 6.3e-37
TAIR|locus:2040174527 CYP82F1 ""cytochrome P450, fam 0.622 0.313 0.449 1.5e-35
TAIR|locus:2043614515 CYP76C3 ""cytochrome P450, fam 0.596 0.306 0.493 1.9e-35
TAIR|locus:2012673368 CYP76C5 ""cytochrome P450, fam 0.554 0.399 0.477 5.8e-34
TAIR|locus:2142878513 TT7 "TRANSPARENT TESTA 7" [Ara 0.618 0.319 0.431 9.5e-34
TAIR|locus:2043694511 CYP76C4 ""cytochrome P450, fam 0.550 0.285 0.456 3.2e-33
TAIR|locus:2043605512 CYP76C2 ""cytochrome P450, fam 0.543 0.281 0.463 1.1e-32
TAIR|locus:2116607 CYP82C4 ""cytochrome P450, family 82, subfamily C, polypeptide 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
 Identities = 87/158 (55%), Positives = 114/158 (72%)

Query:   101 RQVDEEDIKNLVHLQAILKEAFRLYPAVPFLVPHESMEECTINGYHVPARTQLFINAWKI 160
             R V++ DI+NLV+LQAI+KE  RLYPA P L P E+ME+CT+ GY+VP  T+L +N WKI
Sbjct:   359 RNVEDSDIENLVYLQAIIKETLRLYPAGPLLGPREAMEDCTVAGYYVPCGTRLIVNVWKI 418

Query:   161 QRDPSVWEEPSKFQPERFLTRH-KDIYVKGQNFELLPFSSGRRMCPRVSFSLQVMQFTLA 219
             QRDP V+ EP++F+PERF+T   K+  V+GQNFEL+PF SGRR CP  S ++QV+   LA
Sbjct:   419 QRDPKVYMEPNEFRPERFITGEAKEFDVRGQNFELMPFGSGRRSCPGSSLAMQVLHLGLA 478

Query:   220 SLLQGFDFATRSNEPVDMGEGLGLTMEKSQSFEVLVTP 257
               L  FD  T  + PVDM E  GLT+ K+   EVL++P
Sbjct:   479 RFLHSFDVKTVMDMPVDMSENPGLTIPKATPLEVLISP 516
GO:0005506 "iron ion binding" evidence=IEA
GO:0009055 "electron carrier activity" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0019825 "oxygen binding" evidence=ISS
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0004497 "monooxygenase activity" evidence=IDA
GO:0071281 "cellular response to iron ion" evidence=IEP
GO:0010043 "response to zinc ion" evidence=RCA
TAIR|locus:2116622 CYP82C3 ""cytochrome P450, family 82, subfamily C, polypeptide 3"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116652 CYP82C2 ""cytochrome P450, family 82, subfamily C, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090275 CYP82G1 "cytochrome P450, family 82, subfamily G, polypeptide 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040174 CYP82F1 ""cytochrome P450, family 82, subfamily F, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043614 CYP76C3 ""cytochrome P450, family 76, subfamily C, polypeptide 3"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012673 CYP76C5 ""cytochrome P450, family 76, subfamily C, polypeptide 5"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2142878 TT7 "TRANSPARENT TESTA 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043694 CYP76C4 ""cytochrome P450, family 76, subfamily C, polypeptide 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043605 CYP76C2 ""cytochrome P450, family 76, subfamily C, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00014716001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (521 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query265
PLN02687517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 6e-48
PLN00110504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 9e-46
PLN03112514 PLN03112, PLN03112, cytochrome P450 family protein 4e-42
PLN03234499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 9e-37
PLN02183516 PLN02183, PLN02183, ferulate 5-hydroxylase 3e-36
pfam00067461 pfam00067, p450, Cytochrome P450 8e-36
PLN02394503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 2e-34
PLN02966502 PLN02966, PLN02966, cytochrome P450 83A1 2e-31
PLN02971543 PLN02971, PLN02971, tryptophan N-hydroxylase 2e-26
PLN02655466 PLN02655, PLN02655, ent-kaurene oxidase 2e-24
PLN03018534 PLN03018, PLN03018, homomethionine N-hydroxylase 2e-19
PTZ00404482 PTZ00404, PTZ00404, cytochrome P450; Provisional 3e-19
PLN00168519 PLN00168, PLN00168, Cytochrome P450; Provisional 3e-18
PLN02738633 PLN02738, PLN02738, carotene beta-ring hydroxylase 4e-18
PLN02936489 PLN02936, PLN02936, epsilon-ring hydroxylase 7e-17
COG2124411 COG2124, CypX, Cytochrome P450 [Secondary metaboli 2e-16
PLN02169500 PLN02169, PLN02169, fatty acid (omega-1)-hydroxyla 4e-13
PLN02290516 PLN02290, PLN02290, cytokinin trans-hydroxylase 2e-12
PLN02774463 PLN02774, PLN02774, brassinosteroid-6-oxidase 7e-07
PLN03195516 PLN03195, PLN03195, fatty acid omega-hydroxylase; 9e-06
PLN02302490 PLN02302, PLN02302, ent-kaurenoic acid oxidase 4e-05
PLN02426502 PLN02426, PLN02426, cytochrome P450, family 94, su 5e-05
PLN02500490 PLN02500, PLN02500, cytochrome P450 90B1 9e-05
PLN02196463 PLN02196, PLN02196, abscisic acid 8'-hydroxylase 0.003
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information 
 Score =  165 bits (420), Expect = 6e-48
 Identities = 67/169 (39%), Positives = 104/169 (61%), Gaps = 5/169 (2%)

Query: 101 RQVDEEDIKNLVHLQAILKEAFRLYPAVPFLVPHESMEECTINGYHVPARTQLFINAWKI 160
           R V E D+  L +LQA++KE FRL+P+ P  +P  + EEC INGYH+P    L +N W I
Sbjct: 346 RLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAI 405

Query: 161 QRDPSVWEEPSKFQPERFLT--RHKDIYVKGQNFELLPFSSGRRMCPRVSFSLQVMQFTL 218
            RDP  W +P +F+P+RFL    H  + VKG +FEL+PF +GRR+C  +S+ L+++    
Sbjct: 406 ARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLT 465

Query: 219 ASLLQGFDF---ATRSNEPVDMGEGLGLTMEKSQSFEVLVTPCLSAAFY 264
           A+L+  FD+     ++ + ++M E  GLT++++    V   P L  + Y
Sbjct: 466 ATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRLLPSAY 514

Length = 517
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase Back     alignment and domain information
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase Back     alignment and domain information
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase Back     alignment and domain information
>gnl|CDD|178373 PLN02774, PLN02774, brassinosteroid-6-oxidase Back     alignment and domain information
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase Back     alignment and domain information
>gnl|CDD|215235 PLN02426, PLN02426, cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>gnl|CDD|215276 PLN02500, PLN02500, cytochrome P450 90B1 Back     alignment and domain information
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 265
KOG0158499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 100.0
KOG0157497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 100.0
PLN02971543 tryptophan N-hydroxylase 100.0
KOG0156489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
PTZ00404482 cytochrome P450; Provisional 100.0
PLN02169500 fatty acid (omega-1)-hydroxylase/midchain alkane h 100.0
PLN02394503 trans-cinnamate 4-monooxygenase 100.0
PLN03234499 cytochrome P450 83B1; Provisional 100.0
PLN02290516 cytokinin trans-hydroxylase 100.0
PLN02500490 cytochrome P450 90B1 100.0
PLN02426502 cytochrome P450, family 94, subfamily C protein 100.0
PLN00168519 Cytochrome P450; Provisional 100.0
PLN00110504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 100.0
PLN03112514 cytochrome P450 family protein; Provisional 100.0
PLN02738633 carotene beta-ring hydroxylase 100.0
PLN02655466 ent-kaurene oxidase 100.0
PLN02183516 ferulate 5-hydroxylase 100.0
PF00067463 p450: Cytochrome P450 p450 superfamily signature b 100.0
KOG0159519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 100.0
PLN03195516 fatty acid omega-hydroxylase; Provisional 100.0
PLN02774463 brassinosteroid-6-oxidase 100.0
PLN02687517 flavonoid 3'-monooxygenase 100.0
PLN03141452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 100.0
PLN03018534 homomethionine N-hydroxylase 100.0
PLN02966502 cytochrome P450 83A1 100.0
PLN02936489 epsilon-ring hydroxylase 100.0
PLN02987472 Cytochrome P450, family 90, subfamily A 100.0
PLN02196463 abscisic acid 8'-hydroxylase 100.0
PLN02302490 ent-kaurenoic acid oxidase 100.0
KOG0684486 consensus Cytochrome P450 [Secondary metabolites b 100.0
COG2124411 CypX Cytochrome P450 [Secondary metabolites biosyn 100.0
PLN02648480 allene oxide synthase 100.0
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=100.00  E-value=9e-51  Score=372.00  Aligned_cols=201  Identities=26%  Similarity=0.460  Sum_probs=182.9

Q ss_pred             cCHHHHHHHhhhc--cccC-CcccHHHHHHHHhcccC-CccccccCCcccCCCC-CCHHHhhcCHHHHHHHHHHHhhCCC
Q 043270           53 YTAYEIRIAVYTP--EAYC-PTTGLPFVRIRLAAFNS-DRFCPTSGLPIFHIRQ-VDEEDIKNLVHLQAILKEAFRLYPA  127 (265)
Q Consensus        53 l~~~~i~~~~~~f--ag~~-T~~~l~~~l~~L~~~p~-~~~l~~E~~~~~~~~~-~~~~~l~~lp~l~a~i~E~lRl~p~  127 (265)
                      ++.+||++++..|  ||+| ||+++++++|+||+||+ |+++++||++++.+.. +|+|.+.+|+||++||+||||+||+
T Consensus       290 lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~  369 (499)
T KOG0158|consen  290 LTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPP  369 (499)
T ss_pred             cCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCC
Confidence            7789999999977  9996 55999999999999999 9999999999974443 9999999999999999999999999


Q ss_pred             CccccceecccceeEc-CEEeCCCcEEEEcccccccCCCCCCCCCCeecCCCCCCCcCccccCCCccccccccCCCCCch
Q 043270          128 VPFLVPHESMEECTIN-GYHVPARTQLFINAWKIQRDPSVWEEPSKFQPERFLTRHKDIYVKGQNFELLPFSSGRRMCPR  206 (265)
Q Consensus       128 ~~~~~~R~~~~d~~l~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G  206 (265)
                      .+.. .|.+++|+++. ++.||||+.|.++.+++||||++||||++|+||||.+++.+   ...+..|+|||.|||+|+|
T Consensus       370 ~~~~-~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~---~~~~~~ylPFG~GPR~CIG  445 (499)
T KOG0158|consen  370 APFL-NRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK---SRHPGAYLPFGVGPRNCIG  445 (499)
T ss_pred             cccc-cceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc---ccCCccccCCCCCccccHH
Confidence            9995 89999999999 99999999999999999999999999999999999987743   3478899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCeEeeCCCCCCCccccc---eeeeecCCceEEEEEEcC
Q 043270          207 VSFSLQVMQFTLASLLQGFDFATRSNEPVDMGEGL---GLTMEKSQSFEVLVTPCL  259 (265)
Q Consensus       207 ~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~R~  259 (265)
                      ++||++|+|+.|++||++|+++..+.....  ...   ++++.|.+++++++++|+
T Consensus       446 mRfa~mq~K~~L~~lL~~f~~~~~~~t~~~--~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  446 MRFALMEAKLALAHLLRNFSFEVCPTTIIP--LEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             HHHHHHHHHHHHHHHHhhCEEecCCcccCc--ccCCccceeeecCCceEEEEEeCC
Confidence            999999999999999999999998843322  333   777889999999999985

>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query265
2hi4_A495 Crystal Structure Of Human Microsomal P450 1a2 In C 1e-20
3pm0_A507 Structural Characterization Of The Complex Between 1e-18
4i8v_A491 Human Cytochrome P450 1a1 In Complex With Alpha-nap 2e-16
3k9v_A482 Crystal Structure Of Rat Mitochondrial P450 24a1 S5 3e-15
3dbg_A467 Crystal Structure Of Cytochrome P450 170a1 (Cyp170a 7e-15
3ruk_A494 Human Cytochrome P450 Cyp17a1 In Complex With Abira 3e-14
3qm4_A479 Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Compl 4e-14
2f9q_A479 Crystal Structure Of Human Cytochrome P450 2d6 Leng 1e-13
3ua1_A487 Crystal Structure Of The Cytochrome P4503a4-Bromoer 7e-13
1w0e_A485 Crystal Structure Of Human Cytochrome P450 3a4 Leng 7e-13
1tqn_A486 Crystal Structure Of Human Microsomal P450 3a4 Leng 7e-13
3qz1_A496 Crystal Structure Of Bovine Steroid Of 21-Hydroxyla 6e-12
3c6g_A479 Crystal Structure Of Cyp2r1 In Complex With Vitamin 6e-12
3czh_A481 Crystal Structure Of Cyp2r1 In Complex With Vitamin 7e-12
3hf2_A482 Crystal Structure Of The I401p Mutant Of Cytochrome 1e-10
1zoa_A473 Crystal Structure Of A328v Mutant Of The Heme Domai 7e-10
2q9f_A456 Crystal Structure Of Human Cytochrome P450 46a1 In 8e-10
3tk3_A476 Cytochrome P450 2b4 Mutant L437a In Complex With 4- 9e-10
3kx4_A470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 1e-09
2q6n_A478 Structure Of Cytochrome P450 2b4 With Bound 1-(4- C 1e-09
4h1n_A479 Crystal Structure Of P450 2b4 F297a Mutant In Compl 1e-09
4du2_B470 Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamin 2e-09
1suo_A476 Structure Of Mammalian Cytochrome P450 2b4 With Bou 2e-09
2bmh_A455 Modeling Protein-Substrate Interactions In The Heme 2e-09
2x7y_A455 P450 Bm3 F87a In Complex With Dmso Length = 455 2e-09
1yqo_A455 T268a Mutant Heme Domain Of Flavocytochrome P450 Bm 2e-09
3dgi_A461 Crystal Structure Of F87aT268A MUTANT OF CYP BM3 Le 2e-09
1po5_A476 Structure Of Mammalian Cytochrome P450 2b4 Length = 2e-09
3ekb_A470 Crystal Structure Of The A264c Mutant Heme Domain O 2e-09
1yqp_A455 T268n Mutant Cytochrome Domain Of Flavocytochrome P 2e-09
2nnb_A471 The Q403k Mutnat Heme Domain Of Flavocytochrome P45 2e-09
2ij2_A470 Atomic Structure Of The Heme Domain Of Flavocytochr 2e-09
3npl_A470 Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme D 2e-09
3ekd_A470 Crystal Structure Of The A264m Heme Domain Of Cytoc 2e-09
2uwh_A458 Cytochrome P450 Bm3 Mutant In Complex With Palmitic 2e-09
1fah_A471 Structure Of Cytochrome P450 Length = 471 2e-09
2hpd_A471 Crystal Structure Of Hemoprotein Domain Of P450bm-3 2e-09
1bvy_A458 Complex Of The Heme And Fmn-Binding Domains Of The 2e-09
3kx5_A470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 2e-09
3ben_A470 Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine 2e-09
1jpz_A473 Crystal Structure Of A Complex Of The Heme Domain O 2e-09
3ekf_A470 Crystal Structure Of The A264q Heme Domain Of Cytoc 2e-09
2ij3_A470 Structure Of The A264h Mutant Of Cytochrome P450 Bm 2e-09
2ij4_A470 Structure Of The A264k Mutant Of Cytochrome P450 Bm 2e-09
1smi_A471 A Single Mutation Of P450 Bm3 Induces The Conformat 2e-09
4dtw_B469 Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Seroto 2e-09
3kx3_A470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 2e-09
1zo4_A473 Crystal Structure Of A328s Mutant Of The Heme Domai 3e-09
4duf_A471 Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Seroto 3e-09
4duc_A472 Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand Leng 3e-09
3cbd_A455 Directed Evolution Of Cytochrome P450 Bm3, To Octan 4e-09
1p0x_A455 F393y Mutant Heme Domain Of Flavocytochrome P450 Bm 4e-09
3m4v_A482 Crystal Structure Of The A330p Mutant Of Cytochrome 4e-09
3psx_A487 Crystal Structure Of The Kt2 Mutant Of Cytochrome P 4e-09
2ve3_A444 Retinoic Acid Bound Cyanobacterial Cyp120a1 Length 4e-09
3qi8_B472 Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1) 5e-09
1p0w_A455 F393w Mutant Heme Domain Of Flavocytochrome P450 Bm 6e-09
4dua_A471 Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand Leng 6e-09
4dub_A472 Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopami 6e-09
4dud_A471 Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand Le 8e-09
1jme_A455 Crystal Structure Of Phe393his Cytochrome P450 Bm3 1e-08
4dvq_A483 Structure Of Human Aldosterone Synthase, Cyp11b2, I 1e-08
1p0v_A455 F393a Mutant Heme Domain Of Flavocytochrome P450 Bm 1e-08
3mzs_A486 Crystal Structure Of Cytochrome P450 Cyp11a1 In Com 2e-08
3ibd_A476 Crystal Structure Of A Cytochrome P450 2b6 Genetic 4e-08
3e4e_A476 Human Cytochrome P450 2e1 In Complex With The Inhib 1e-07
3ld6_A461 Crystal Structure Of Human Lanosterol 14alpha-Demet 3e-07
2p85_A476 Structure Of Human Lung Cytochrome P450 2a13 With I 7e-07
1dt6_A473 Structure Of Mammalian Cytochrome P450 2c5 Length = 1e-06
1r9o_A477 Crystal Structure Of P4502c9 With Flurbiprofen Boun 1e-06
1og2_A475 Structure Of Human Cytochrome P450 Cyp2c9 Length = 2e-06
2pg6_A476 Crystal Structure Of Human Microsomal P450 2a6 L240 2e-06
1z10_A476 Crystal Structure Of Human Microsomal P450 2a6 With 2e-06
3ebs_A476 Human Cytochrome P450 2a6 I208sI300FG301AS369G IN C 2e-06
2pg7_A476 Crystal Structure Of Human Microsomal P450 2a6 N297 2e-06
2pg5_A476 Crystal Structure Of Human Microsomal P450 2a6 N297 2e-06
3na0_A471 Crystal Structure Of Human Cyp11a1 In Complex With 2e-06
3n9y_A487 Crystal Structure Of Human Cyp11a1 In Complex With 3e-06
1pq2_A476 Crystal Structure Of Human Drug Metabolizing Cytoch 3e-06
1izo_A417 Cytochrome P450 Bs Beta Complexed With Fatty Acid L 4e-06
4gqs_A477 Structure Of Human Microsomal Cytochrome P450 (cyp) 3e-05
3eqm_A503 Crystal Structure Of Human Placental Aromatase Cyto 4e-05
3b98_A475 Crystal Structure Of Zebrafish Prostacyclin Synthas 5e-04
1ea1_A455 Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) 7e-04
3vno_A407 Cytochrome P450sp Alpha (cyp152b1) Mutant R241e Len 8e-04
3vm4_A407 Cytochrome P450sp Alpha (Cyp152b1) In Complex With 8e-04
3voo_A407 Cytochrome P450sp Alpha (cyp152b1) Mutant A245e Len 8e-04
1x8v_A455 Estriol-Bound And Ligand-Free Structures Of Sterol 9e-04
2w0a_A455 Cyp51 Of M. Tuberculosis Bound To An Inhibitor N-[( 9e-04
1u13_A455 Crystal Structure Analysis Of The C37lC151TC442A-Tr 9e-04
3awq_A415 Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f Leng 9e-04
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex With Alpha-Naphthoflavone Length = 495 Back     alignment and structure 
Iteration: 1

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 81/143 (56%)
Query: 107 DIKNLVHLQAILKEAFRLYPAVPFLVPHESMEECTINGYHVPARTQLFINAWKIQRDPSV 166
           D   L +L+A + E FR    +PF +PH +  + T+NG+++P +  +F+N W++  DP +
Sbjct: 337 DRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPEL 396
Query: 167 WEEPSKFQPERFLTRHKDIYVKGQNFELLPFSSGRRMCPRVSFSLQVMQFTLASLLQGFD 226
           WE+PS+F+PERFLT       K  + +++ F  G+R C     +   +   LA LLQ  +
Sbjct: 397 WEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLE 456
Query: 227 FATRSNEPVDMGEGLGLTMEKSQ 249
           F+      VD+    GLTM+ ++
Sbjct: 457 FSVPPGVKVDLTPIYGLTMKHAR 479
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha- Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1) Length = 507 Back     alignment and structure
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With Alpha-naphthoflavone Length = 491 Back     alignment and structure
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In Complex With Chaps Length = 482 Back     alignment and structure
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From Streptomyces Coelicolor Length = 467 Back     alignment and structure
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone Length = 494 Back     alignment and structure
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex Length = 479 Back     alignment and structure
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6 Length = 479 Back     alignment and structure
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome P4503a4-Bromoergocryptine Complex Length = 487 Back     alignment and structure
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4 Length = 485 Back     alignment and structure
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4 Length = 486 Back     alignment and structure
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase (P450c21) Length = 496 Back     alignment and structure
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3 Length = 479 Back     alignment and structure
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2 Length = 481 Back     alignment and structure
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450 Bm3 Length = 482 Back     alignment and structure
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of P450bm-3 With N-Palmitoylglycine Length = 473 Back     alignment and structure
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex With Cholesterol-3-Sulphate Length = 456 Back     alignment and structure
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With 4-(4-Chlorophenyl) Imidazole Length = 476 Back     alignment and structure
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4- Cholorophenyl)imidazole Length = 478 Back     alignment and structure
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With Anti- Platelet Drug Clopidogrel Length = 479 Back     alignment and structure
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine Length = 470 Back     alignment and structure
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound 4-(4- Chlorophenyl)imidazole Length = 476 Back     alignment and structure
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain Of Cytochrome P450bm-3 Length = 455 Back     alignment and structure
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso Length = 455 Back     alignment and structure
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3 Length = 461 Back     alignment and structure
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 Length = 476 Back     alignment and structure
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3 Length = 471 Back     alignment and structure
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome P450- Bm3 Length = 470 Back     alignment and structure
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain, A Ruthenium Modified P450 Bm3 Mutant Length = 470 Back     alignment and structure
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid Length = 458 Back     alignment and structure
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450 Length = 471 Back     alignment and structure
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A Prototype For Microsomal P450's Length = 471 Back     alignment and structure
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The Cytochrome P450(Bm-3) Length = 458 Back     alignment and structure
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine Inhibitor Bound To The Heme Domain Of Cytochrome P450-Bm3 Length = 470 Back     alignment and structure
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of P450bm- 3 With N-Palmitoylglycine Length = 473 Back     alignment and structure
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational Rearrangement Seen Upon Substrate-Binding In Wild-Type Enzyme Length = 471 Back     alignment and structure
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin Length = 469 Back     alignment and structure
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of P450bm-3 Length = 473 Back     alignment and structure
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin Length = 471 Back     alignment and structure
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand Length = 472 Back     alignment and structure
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane Monoxygenase 139-3 Length = 455 Back     alignment and structure
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450 Bm3 Length = 482 Back     alignment and structure
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3 Length = 487 Back     alignment and structure
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1 Length = 444 Back     alignment and structure
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1) Length = 472 Back     alignment and structure
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand Length = 471 Back     alignment and structure
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine Length = 472 Back     alignment and structure
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand Length = 471 Back     alignment and structure
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In Complex With Deoxycorticosterone Length = 483 Back     alignment and structure
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex With 22- Hydroxy-Cholesterol Length = 486 Back     alignment and structure
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant In Complex With The Inhibitor 4-(4-Chlorophenyl)imidazole Length = 476 Back     alignment and structure
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4- Methylpyrazole Length = 476 Back     alignment and structure
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase (C Complex With Ketoconazole Length = 461 Back     alignment and structure
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole Bound In Two Alternate Conformations Length = 476 Back     alignment and structure
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5 Length = 473 Back     alignment and structure
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound Length = 477 Back     alignment and structure
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9 Length = 475 Back     alignment and structure
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q Length = 476 Back     alignment and structure
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With Coumarin Bound Length = 476 Back     alignment and structure
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX With Phenacetin Length = 476 Back     alignment and structure
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V Length = 476 Back     alignment and structure
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q Length = 476 Back     alignment and structure
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22- Dihydroxycholesterol Length = 471 Back     alignment and structure
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With Cholesterol Length = 487 Back     alignment and structure
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome P450 2c8 Length = 476 Back     alignment and structure
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid Length = 417 Back     alignment and structure
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19 Length = 477 Back     alignment and structure
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome P450 In Complex With Androstenedione Length = 503 Back     alignment and structure
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase (Cytochrome P450 8a1) Length = 475 Back     alignment and structure
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From Mycobacterium Tuberculosis In Complex With Fluconazole Length = 455 Back     alignment and structure
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e Length = 407 Back     alignment and structure
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With (R)-Ibuprophen Length = 407 Back     alignment and structure
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e Length = 407 Back     alignment and structure
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol 14alpha- Demethylase (Cyp51) Length = 455 Back     alignment and structure
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl] Cyclohexanecarboxamide Length = 455 Back     alignment and structure
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple Mutant Of Cyp51 From Mycobacterium Tuberculosis Length = 455 Back     alignment and structure
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f Length = 415 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query265
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 2e-54
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 6e-53
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 5e-51
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 7e-47
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 5e-35
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 2e-34
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 3e-34
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 1e-33
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 4e-33
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 2e-32
3qz1_A496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 2e-30
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 2e-30
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 3e-30
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 6e-30
2hi4_A495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 6e-30
3pm0_A507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 1e-29
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 2e-29
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 1e-27
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 3e-27
3swz_A494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 4e-27
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 2e-25
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 8e-25
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 1e-24
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 2e-24
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 2e-24
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 3e-24
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 6e-23
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 2e-22
3nxu_A485 Cytochrome P450 3A4; alpha beta protein, cytochrom 5e-21
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
 Score =  181 bits (462), Expect = 2e-54
 Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 18/173 (10%)

Query: 101 RQVDEEDIKNLVHLQAILKEAFRLYPAVPFLVPHESMEECTI-----NGYHVPARTQLFI 155
               EE  KN     ++L E  RL  A       +  ++  I       YH+    +L +
Sbjct: 299 HLRLEERQKNTPVFDSVLWETLRLTAAALI--TRDVTQDKKICLSNGQEYHLRRGDRLCV 356

Query: 156 NAW-KIQRDPSVWEEPSKFQPERFL----TRHKDIYVKGQ--NFELLPFSSGRRMCPRVS 208
             +   Q DP + ++P  FQ +RFL    T  KD +  G    +  +P+ +   +CP   
Sbjct: 357 FPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRH 416

Query: 209 FSLQVMQFTLASLLQGFDFAT---RSNEPVDMGEGLGL-TMEKSQSFEVLVTP 257
           F++  ++  + ++L  FD       +  P+      G   ++ +   E+    
Sbjct: 417 FAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRI 469
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Length = 473 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query265
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 100.0
3pm0_A507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 100.0
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 100.0
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 100.0
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 100.0
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 100.0
3ld6_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3nxu_A485 Cytochrome P450 3A4; alpha beta protein, cytochrom 100.0
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 100.0
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 100.0
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 100.0
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 100.0
3swz_A494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 100.0
2hi4_A495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 100.0
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 100.0
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 100.0
3qz1_A496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 100.0
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 100.0
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 100.0
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 100.0
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 100.0
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 100.0
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 100.0
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 100.0
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 100.0
3v8d_A491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 100.0
3buj_A397 CALO2; heme, iron, metal-binding, monooxygenase, o 100.0
3a4g_A411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 100.0
4fb2_A398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 100.0
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 100.0
3ejb_B404 Biotin biosynthesis cytochrome P450-like enzyme; p 100.0
3oft_A396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 100.0
2jjn_A411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 100.0
3aba_A403 Cytochrome P450; oxidoreductase, heme, monooxygena 100.0
1ued_A406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 100.0
1cpt_A428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 100.0
3abb_A408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 100.0
2zwu_A415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 100.0
1lfk_A398 OXYB, P450 monooxygenase; oxidative phenol couplin 100.0
3nc3_A441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 100.0
2cd8_A436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 100.0
2xkr_A398 CYP142, putative cytochrome P450 142; oxidoreducta 100.0
1gwi_A411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 100.0
3lxh_A421 Cytochrome P450; heme, iron, metal-binding, monoox 100.0
3mgx_A415 Putative P450 monooxygenase; cytochrome P450 oxida 100.0
1q5d_A419 P450 epoxidase; cytochrome P450, epothilone, oxydo 100.0
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 100.0
1jfb_A404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 100.0
1odo_A408 Putative cytochrome P450 154A1; P450 monooxygenase 100.0
2z3t_A425 Cytochrome P450; monoxygenase, oxydoreductase, hem 100.0
2uuq_A414 CYP130, cytochrome P450 130; iron, heme, monooxyge 100.0
2xbk_A404 PIMD protein; epoxidation, oxidoreductase; HET: HE 100.0
2dkk_A411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 100.0
3r9b_A418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 100.0
2y5n_A417 MYCG, P-450-like protein; oxidoreductase, mycinami 100.0
1s1f_A406 Putative cytochrome P450; cytochrome P450 oxidored 100.0
1n40_A396 P450 MT2, cytochrome P450 121; heme binding, oxyge 100.0
1z8o_A404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 100.0
2zbx_A412 Cytochrome P450-SU1; beta prism, heme, iron, metal 100.0
2z36_A413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 100.0
3b4x_A367 367AA long hypothetical cytochrome P450; HEM prote 100.0
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 100.0
3rwl_A426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 100.0
2wiy_A394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 100.0
3tyw_A417 Putative cytochrome P450; P450 monooxygenase, oxid 100.0
3ivy_A433 Cytochrome P450 CYP125; cholesterol, monooxygenase 100.0
3p3o_A416 Cytochrome P450; monooxygenase, oxidoreductase; HE 100.0
3tkt_A450 Cytochrome P450; aromatic hydrocarbon binding of P 100.0
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 100.0
2wm5_A435 CYP124, putative cytochrome P450 124; metal-bindin 100.0
1io7_A368 Cytochrome P450 CYP119; thermophilic, cytochromo P 100.0
2rfb_A343 Cytochrome P450; heme, iron, metal-binding, monoox 100.0
4dnj_A412 Putative cytochrome P450; oxidoreductase; HET: HEM 100.0
3oo3_A384 OXY protein; cytochrome P450, monooxygenase, PCD-t 100.0
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 100.0
4dxy_A417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 100.0
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
Probab=100.00  E-value=4.7e-51  Score=375.94  Aligned_cols=205  Identities=23%  Similarity=0.393  Sum_probs=180.1

Q ss_pred             cCHHHHHHHhhhc--cccC-CcccHHHHHHHHhcccC-CccccccCCccc-CCCCCCHHHhhcCHHHHHHHHHHHhhCCC
Q 043270           53 YTAYEIRIAVYTP--EAYC-PTTGLPFVRIRLAAFNS-DRFCPTSGLPIF-HIRQVDEEDIKNLVHLQAILKEAFRLYPA  127 (265)
Q Consensus        53 l~~~~i~~~~~~f--ag~~-T~~~l~~~l~~L~~~p~-~~~l~~E~~~~~-~~~~~~~~~l~~lp~l~a~i~E~lRl~p~  127 (265)
                      ++++++..++..+  ||+| |+++++|++++|+.||+ |+++++|++.++ .++.++++++.+|||++|||+|+||++|+
T Consensus       268 l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~  347 (479)
T 3tbg_A          268 FNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDI  347 (479)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred             hhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhccccchhhhccccccccceeeecccccc
Confidence            7789999998844  9996 55999999999999999 999999999888 44589999999999999999999999999


Q ss_pred             CccccceecccceeEcCEEeCCCcEEEEcccccccCCCCCCCCCCeecCCCCCCCcCccccCCCccccccccCCCCCchH
Q 043270          128 VPFLVPHESMEECTINGYHVPARTQLFINAWKIQRDPSVWEEPSKFQPERFLTRHKDIYVKGQNFELLPFSSGRRMCPRV  207 (265)
Q Consensus       128 ~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G~  207 (265)
                      ++...+|.+.+|++++|+.|||||.|.++.+++|+||++|+||++|+||||++.+++   ...+..|+|||+|+|.|+|+
T Consensus       348 ~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~---~~~~~~~~pFG~G~R~C~G~  424 (479)
T 3tbg_A          348 VPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGH---FVKPEAFLPFSAGRRACLGE  424 (479)
T ss_dssp             STTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGBCTTCC---BCCCTTCCTTCCSTTSCTTH
T ss_pred             ccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCccccCCCCcc---cCCCCceecCCCCCcCChhH
Confidence            999877788899999999999999999999999999999999999999999987653   23567899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCeEeeCCCCCCC-ccccceeeeecCCceEEEEEEcCCC
Q 043270          208 SFSLQVMQFTLASLLQGFDFATRSNEPVD-MGEGLGLTMEKSQSFEVLVTPCLSA  261 (265)
Q Consensus       208 ~lA~~e~~~~la~ll~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~R~~~  261 (265)
                      +||++|+++++|.||++|+|+++++.+.. .....+++.. +.+++|+++||++.
T Consensus       425 ~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-P~~~~v~~~pRs~~  478 (479)
T 3tbg_A          425 PLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVS-PSPYELCAVPRHHH  478 (479)
T ss_dssp             HHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEE-ECCCCBEEEEC---
T ss_pred             HHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeec-CCCeEEEEEECCCC
Confidence            99999999999999999999998875432 3334456666 46899999999975
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 265
d3czha1463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 9e-32
d1tqna_472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 8e-31
d1po5a_465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 6e-27
d2ij2a1453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 1e-21
d1r9oa_467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 9e-21
d2ciba1445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 8e-19
d1izoa_411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 6e-15
d1cpta_428 a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas s 1e-14
d1odoa_401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 4e-14
d1z8oa1402 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharo 4e-14
d1jfba_399 a.104.1.1 (A:) Cytochrome P450-NOR, nitric reducta 5e-13
d1gwia_403 a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyce 1e-12
d1lfka_394 a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatops 8e-12
d1q5da_401 a.104.1.1 (A:) Cytochrome P450epok {Sorangium cell 2e-11
d1s1fa_399 a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [ 4e-11
d1ueda_403 a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatops 9e-11
d1n97a_385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 2e-09
d1re9a_404 a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas pu 4e-09
d1n40a_395 a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {My 5e-09
d1ue8a_367 a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodai 5e-09
d1io7a_366 a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfata 2e-07
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Vitamin D 25-hydroxylase Cyp2R1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (299), Expect = 9e-32
 Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 4/156 (2%)

Query: 102 QVDEEDIKNLVHLQAILKEAFRLYPAVPFLVPHESMEECTINGYHVPARTQLFINAWKIQ 161
           +   +D   + + +A+L E  R    VP  + H + E+  + GY +P  T +  N + + 
Sbjct: 310 KPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVH 369

Query: 162 RDPSVWEEPSKFQPERFLTRHKDIYVKGQNFELLPFSSGRRMCPRVSFSLQVMQFTLASL 221
            D   W +P  F PERFL          +   L+PFS GRR C     +   M     +L
Sbjct: 370 FDEKYWRDPEVFHPERFLDSSGY---FAKKEALVPFSLGRRHCLGEHLARMEMFLFFTAL 426

Query: 222 LQGFDFATRSNEPVDMGEGLGLTMEKSQSFEVLVTP 257
           LQ F          D+   LG+T+ + Q + +    
Sbjct: 427 LQRFHLHFPHELVPDLKPRLGMTL-QPQPYLICAER 461
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Length = 428 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Length = 402 Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Length = 399 Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 403 Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Length = 394 Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Length = 401 Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Length = 399 Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Length = 403 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Length = 404 Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 395 Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Length = 367 Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 366 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query265
d3czha1463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 100.0
d1tqna_472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 100.0
d2ciba1445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 100.0
d1r9oa_467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 100.0
d1po5a_465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 100.0
d1izoa_411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 100.0
d2ij2a1453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 100.0
d1n97a_385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 100.0
d1gwia_403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 100.0
d1cpta_428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 100.0
d1n40a_395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 100.0
d1re9a_404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 100.0
d1jfba_399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 100.0
d1z8oa1402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 100.0
d1ue8a_367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 100.0
d1q5da_401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 100.0
d1odoa_401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 100.0
d1ueda_403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 100.0
d1s1fa_399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 100.0
d1io7a_366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 99.98
d1lfka_394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.97
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Vitamin D 25-hydroxylase Cyp2R1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-48  Score=350.93  Aligned_cols=204  Identities=23%  Similarity=0.348  Sum_probs=184.4

Q ss_pred             ccCHHHHHHHhhhc--cccC-CcccHHHHHHHHhcccC-CccccccCCcccCC-CCCCHHHhhcCHHHHHHHHHHHhhCC
Q 043270           52 RYTAYEIRIAVYTP--EAYC-PTTGLPFVRIRLAAFNS-DRFCPTSGLPIFHI-RQVDEEDIKNLVHLQAILKEAFRLYP  126 (265)
Q Consensus        52 ~l~~~~i~~~~~~f--ag~~-T~~~l~~~l~~L~~~p~-~~~l~~E~~~~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~p  126 (265)
                      .++++++..++..+  ||++ |+++++|++++|+.||+ |+++++|++.+.+. +.++++++++||||+||++|++|++|
T Consensus       255 ~~s~~~i~~~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lp~l~a~~~Et~Rl~~  334 (463)
T d3czha1         255 TFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCN  334 (463)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHHHhhhhccchhhhhhHHHhhccCcHHHHHHHHHHHhhcCCCCCCCHHHHHhhhhcccccceeeeeec
Confidence            47779999988844  9996 55999999999999999 99999999988854 57999999999999999999999999


Q ss_pred             CCccccceecccceeEcCEEeCCCcEEEEcccccccCCCCCCCCCCeecCCCCCCCcCccccCCCccccccccCCCCCch
Q 043270          127 AVPFLVPHESMEECTINGYHVPARTQLFINAWKIQRDPSVWEEPSKFQPERFLTRHKDIYVKGQNFELLPFSSGRRMCPR  206 (265)
Q Consensus       127 ~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~~~~Fg~G~r~C~G  206 (265)
                      +++....|.+.+|++++|+.||||+.|.++.+++|+||++|+||++|+||||++.++.   ......|+|||+|+|.|+|
T Consensus       335 ~~~~~~~r~~~~~~~~~g~~ipkG~~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~---~~~~~~~~~FG~G~r~C~G  411 (463)
T d3czha1         335 IVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGY---FAKKEALVPFSLGRRHCLG  411 (463)
T ss_dssp             SSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGGGBCTTSC---BCCCTTCCTTCCSTTCCTT
T ss_pred             cccccceecccCCcccCCcEECCCCcccCcHHHhhCCcccCCChhhcCccccCCCccc---cCCCCceeCCCCCCcCCch
Confidence            9998778999999999999999999999999999999999999999999999987743   2356789999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhCeEeeCCCCCCCccccceeeeecCCceEEEEEEcC
Q 043270          207 VSFSLQVMQFTLASLLQGFDFATRSNEPVDMGEGLGLTMEKSQSFEVLVTPCL  259 (265)
Q Consensus       207 ~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R~  259 (265)
                      ++||++|+++++|.||++|+++++++..+++....++++.| .++.|++++|+
T Consensus       412 ~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R~  463 (463)
T d3czha1         412 EHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQP-QPYLICAERRH  463 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCC-CCCCBEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHhcEEEeCCCCCCCceeccCeEEec-cCcEEEEEeCc
Confidence            99999999999999999999999887666677777888765 58899999996
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure