BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043272
(356 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes
Takasagoensis, At Ph 2.5.
pdb|1KSC|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes
Takasagoensis, At Ph 5.6.
pdb|1KSD|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes
Takasagoensis, At Ph 6.5
Length = 433
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 116/255 (45%), Gaps = 57/255 (22%)
Query: 62 SIFFGQLT-SYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWL 120
SI F + +Y+N LL HA+QLF FA NY G + +SI FY+S Y DEL+ A AWL
Sbjct: 163 SIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWL 222
Query: 121 HRATNDQTYLNYLVSTGKTGGTRSL---FAWDDKYVGAQVLAGRLVFEGQGLSGXXXXXX 177
+RATND TYLN S G ++ WD K G QVL +L
Sbjct: 223 YRATNDNTYLNTAESLYDEFGLQNWGGGLNWDSKVSGVQVLLAKLT-------------- 268
Query: 178 XXKXXXXXXXXXXXXXXXXXPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKL 237
YK + ++ + NN QKTP GLL+ W L
Sbjct: 269 ------------------NKQAYKDTVQSYVNYLI------NNQQKTPKGLLYIDMWGTL 304
Query: 238 QYAATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVG 297
++AA A F++ L AA + S A++Q DY L + S+ G
Sbjct: 305 RHAANAAFIM------LEAAELGLSASS-------YRQFAQTQIDYALGDGGR--SFVCG 349
Query: 298 FGANYPTQPNHRGAS 312
FG+N PT+P+HR +S
Sbjct: 350 FGSNPPTRPHHRSSS 364
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA
pdb|1JS4|B Chain B, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA
pdb|4TF4|A Chain A, EndoEXOCELLULASE:CELLOPENTAOSE FROM THERMOMONOSPORA
pdb|4TF4|B Chain B, EndoEXOCELLULASE:CELLOPENTAOSE FROM THERMOMONOSPORA
pdb|3TF4|A Chain A, EndoEXOCELLULASE:CELLOTRIOSE FROM THERMOMONOSPORA
pdb|3TF4|B Chain B, EndoEXOCELLULASE:CELLOTRIOSE FROM THERMOMONOSPORA
pdb|1TF4|A Chain A, EndoEXOCELLULASE FROM THERMOMONOSPORA
pdb|1TF4|B Chain B, EndoEXOCELLULASE FROM THERMOMONOSPORA
Length = 605
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 109/269 (40%), Gaps = 54/269 (20%)
Query: 63 IFFGQLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHR 122
+F +Y L+ HAKQL+ FA Y G++ + +P + S + Y+DEL+ WL++
Sbjct: 166 VFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYK 225
Query: 123 ATNDQTYL-------NYLVSTGKTG--GTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGXX 173
AT D +YL ++L + +T R AWDDK G VL +
Sbjct: 226 ATGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAK------------ 273
Query: 174 XXXXXXKXXXXXXXXXXXXXXXXXPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQP 233
+Y A +++ G N + +PGG+
Sbjct: 274 --------------------ETGKQKYIDDANRWLDYWTV-GVNGQRVPYSPGGMAVLDT 312
Query: 234 WIKLQYAATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMS 293
W L+YAA FV V + + V+ D A Q +Y L NP+ S
Sbjct: 313 WGALRYAANTAFVALVYAKVIDDP----------VRKQRYHDFAVRQINYALGDNPRNSS 362
Query: 294 YTVGFGANYPTQPNHRGASIVSIKTDRIA 322
Y VGFG N P P+HR A TD IA
Sbjct: 363 YVVGFGNNPPRNPHHRTAH--GSWTDSIA 389
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C.
Cellulolyticum
pdb|1IA7|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C.
Cellulolyticium In Complex With Cellobiose
Length = 441
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 72/300 (24%)
Query: 38 PATPAANRRPVHRKSKPTSNCHFKSIFFGQLTSYTNQLLAHAKQLFQFARNYPGLHQNSI 97
P++PA++ + ++K+I ++Y + L AK+L+ + G+
Sbjct: 147 PSSPASDILSETSAALTLMYLNYKNI----DSAYATKCLNAAKELYAMGKANQGVGNGQ- 201
Query: 98 PVIDKFYSSTRYEDELLLATAWLHRATNDQTYL---NYLVSTGKTGGTRSL-----FAWD 149
FY +T + D+L A WL+ ATND TY+ ++ G T + WD
Sbjct: 202 ----SFYQATSFGDDLAWAATWLYTATNDSTYITDAEQFITLGNTMNENKMQDKWTMCWD 257
Query: 150 DKYVGAQVLAGRLVFEGQGLSGXXXXXXXXKXXXXXXXXXXXXXXXXXPQYKSQAE-QFI 208
D YV A + ++ G+ + YK E F
Sbjct: 258 DMYVPAALRLAQIT--GKQI------------------------------YKDAIEFNFN 285
Query: 209 CLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVTVCSNYLTAAHASIQCSGGLV 268
Q + TPGGL W W L+YAA + V+ V C
Sbjct: 286 YWKTQ-------VTTTPGGLKWLSNWGVLRYAAAESMVMLV------------YCKQNPD 326
Query: 269 QPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPNHRGASIVSIKT-DRIAPQWHL 327
Q L+DLA+ Q DYIL NP MSY +G+G+N+ P+HR A+ + D P HL
Sbjct: 327 QS--LLDLAKKQVDYILGDNPANMSYIIGYGSNWCIHPHHRAANGYTYANGDNAKPAKHL 384
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive
Endoglucanase From Separately Expressed Gh9 And Cbm3c
Modules
Length = 466
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 116/295 (39%), Gaps = 66/295 (22%)
Query: 38 PATPAANRRPVHR--KSKPTSNC--------HFKSIFFGQLT-SYTNQLLAHAKQLFQFA 86
PA RP ++ +S P S SI F ++ Y+ + L HAK+LF+FA
Sbjct: 151 PAEVMPMERPSYKVDRSSPGSTVVAETSAALAIASIIFKKVDGEYSKECLKHAKELFEFA 210
Query: 87 RNYPGLHQNSIPVIDKFYSS-TRYEDELLLATAWLHRATNDQTYLNYLVSTGKTGGT--- 142
+ + FY+S + + DEL A WL+ ATND +YL+ S G
Sbjct: 211 DTTKS--DDGYTAANGFYNSWSGFYDELSWAAVWLYLATNDSSYLDKAESYSDKWGYEPQ 268
Query: 143 ------RSLFAWDDKYVGAQVLAGRLVFEGQGLSGXXXXXXXXKXXXXXXXXXXXXXXXX 196
+ WDD G +L R+
Sbjct: 269 TNIPKYKWAQCWDDVTYGTYLLLARI-------------------------------KND 297
Query: 197 XPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVTVCSNYLTA 256
+YK E+ + G N + TP GL W W L+YA T F+ V S++
Sbjct: 298 NGKYKEAIERHLDWWTT-GYNGERITYTPKGLAWLDQWGSLRYATTTAFLACVYSDWE-- 354
Query: 257 AHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFGANYPTQPNHRGA 311
+G + ++ ARSQADY L + S+ VGFG N P +P+HR A
Sbjct: 355 -------NGDKEKAKTYLEFARSQADYALGSTGR--SFVVGFGENPPKRPHHRTA 400
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module
pdb|4DOE|A Chain A, The Liganded Structure Of Cbescii Cela Gh9 Module
Length = 475
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 105/250 (42%), Gaps = 64/250 (25%)
Query: 76 LAHAKQLFQFARNYPGLHQNSIPVIDKFYSS-TRYEDELLLATAWLHRATNDQTYL---- 130
L HAK+L++FA + +Y+S + + DEL A WL+ ATND TYL
Sbjct: 201 LQHAKELYEFAEVTKS--DAGYTAANGYYNSWSGFYDELSWAAVWLYLATNDSTYLTKAE 258
Query: 131 NYLVSTGKTGGTRSL-----FAWDDKYVGAQVLAGRLVFEGQGLSGXXXXXXXXKXXXXX 185
+Y+ + K G+ ++ WDD + GA +L ++ G+ +
Sbjct: 259 SYVQNWPKISGSNTIDYKWAHCWDDVHNGAALLLAKIT--GKDI---------------- 300
Query: 186 XXXXXXXXXXXXPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATF 245
YK E + G N ++ TP GL W W L+YA T F
Sbjct: 301 --------------YKQIIESHLDYWTT-GYNGERIKYTPKGLAWLDQWGSLRYATTTAF 345
Query: 246 VVTVCSNYLTAAHASIQCSGGLVQPSDLMDLAR----SQADYILRKNPKEMSYTVGFGAN 301
+ V S++ + C PS ++ R SQ DY L + S+ VGFG N
Sbjct: 346 LAFVYSDW-------VGC------PSTKKEIYRKFGESQIDYALGSAGR--SFVVGFGTN 390
Query: 302 YPTQPNHRGA 311
P +P+HR A
Sbjct: 391 PPKRPHHRTA 400
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium
Cellulolyticum Complexed With Cellobiose
pdb|1GA2|B Chain B, The Crystal Structure Of Endoglucanase 9g From Clostridium
Cellulolyticum Complexed With Cellobiose
pdb|1G87|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium
Cellulolyticum
pdb|1G87|B Chain B, The Crystal Structure Of Endoglucanase 9g From Clostridium
Cellulolyticum
pdb|1KFG|A Chain A, The X-Ray Crystal Structure Of Cel9g From Clostridium
Cellulolyticum Complexed With A Thio-Oligosaccharide
Inhibitor
pdb|1KFG|B Chain B, The X-Ray Crystal Structure Of Cel9g From Clostridium
Cellulolyticum Complexed With A Thio-Oligosaccharide
Inhibitor
Length = 614
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 98/258 (37%), Gaps = 55/258 (21%)
Query: 63 IFFGQLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHR 122
+F +Y + ++HAK LF A +YSS+ + D+L A WL+
Sbjct: 166 VFKSSDPTYAEKCISHAKNLFDMADK--AKSDAGYTAASGYYSSSSFYDDLSWAAVWLYL 223
Query: 123 ATNDQTYLN----YLVSTGKTGGTRSLF-----AWDDKYVGAQVLAGRLVFEGQGLSGXX 173
ATND TYL+ Y+ + GK T + WDD + GA++L +L
Sbjct: 224 ATNDSTYLDKAESYVPNWGKEQQTDIIAYKWGQCWDDVHYGAELLLAKLT---------- 273
Query: 174 XXXXXXKXXXXXXXXXXXXXXXXXPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQP 233
YK E + G N + TP GL W
Sbjct: 274 ----------------------NKQLYKDSIEMNLDFWTT-GVNGTRVSYTPKGLAWLFQ 310
Query: 234 WIKLQYAATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMS 293
W L++A T F+ V + + + + D +SQ DY L + S
Sbjct: 311 WGSLRHATTQAFLAGVYAEWEGCTPSKVSV---------YKDFLKSQIDYALGSTGR--S 359
Query: 294 YTVGFGANYPTQPNHRGA 311
+ VG+G N P P+HR A
Sbjct: 360 FVVGYGVNPPQHPHHRTA 377
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With
Cellotriose
pdb|1K72|B Chain B, The X-ray Crystal Structure Of Cel9g Complexed With
Cellotriose
Length = 614
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 98/258 (37%), Gaps = 55/258 (21%)
Query: 63 IFFGQLTSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHR 122
+F +Y + ++HAK LF A +YSS+ + D+L A WL+
Sbjct: 166 VFKSSDPTYAEKCISHAKNLFDMADK--AKSDAGYTAASGYYSSSSFYDDLSWAAVWLYL 223
Query: 123 ATNDQTYLN----YLVSTGKTGGTRSLF-----AWDDKYVGAQVLAGRLVFEGQGLSGXX 173
ATND TYL+ Y+ + GK T + WDD + GA++L +L
Sbjct: 224 ATNDSTYLDKAESYVPNWGKEQQTDIIAYKWGQXWDDVHYGAELLLAKLT---------- 273
Query: 174 XXXXXXKXXXXXXXXXXXXXXXXXPQYKSQAEQFICLCVQEGNNNNNLQKTPGGLLWFQP 233
YK E + G N + TP GL W
Sbjct: 274 ----------------------NKQLYKDSIEMNLDFWTT-GVNGTRVSYTPKGLAWLFQ 310
Query: 234 WIKLQYAATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMS 293
W L++A T F+ V + + + + D +SQ DY L + S
Sbjct: 311 WGSLRHATTQAFLAGVYAEWEGCTPSKVSV---------YKDFLKSQIDYALGSTGR--S 359
Query: 294 YTVGFGANYPTQPNHRGA 311
+ VG+G N P P+HR A
Sbjct: 360 FVVGYGVNPPQHPHHRTA 377
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt
Length = 611
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 100/274 (36%), Gaps = 47/274 (17%)
Query: 71 YTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHRATNDQTYL 130
Y + L +AK LF FA P +Y S++++D+ A AWL+ AT ++ YL
Sbjct: 240 YAAKSLDYAKALFDFAEKNPKGVVQGEDGPKGYYGSSKWQDDYCWAAAWLYLATQNEHYL 299
Query: 131 -------NYLVSTGKTGGTRSLFAWDDKYVGAQVLAGRLVFEGQGLSGXXXXXXXXKXXX 183
+Y G + W+D + G + + L +
Sbjct: 300 DEAFKYYDYYAPPGW------IHCWNDVWSGTACILAEI----NDLYDKDSQNFEDRYKR 349
Query: 184 XXXXXXXXXXXXXXPQYKSQAEQFICL----CVQEGNNNNNLQKTPGGLLWFQPWIKLQY 239
K+Q EQ + + + + TPGG ++ W +Y
Sbjct: 350 ASN--------------KNQWEQIDFWKPIQDLLDKWSGGGITVTPGGYVFLNQWGSARY 395
Query: 240 AATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSYTVGFG 299
A + V + H PS + ARSQ DY+L KNP Y VG+
Sbjct: 396 NTAAQLIALVYDKH----HGDT--------PSKYANWARSQMDYLLGKNPLNRCYVVGYS 443
Query: 300 ANYPTQPNHRGASIVSIKTDRIAPQWHLKGQKKG 333
+N P+HR AS + D ++ L G G
Sbjct: 444 SNSVKYPHHRAASGLKDANDSSPHKYVLYGALVG 477
>pdb|1CSC|A Chain A, Structure Of Ternary Complexes Of Citrate Synthase With D-
And L-Malate: Mechanistic Implications
pdb|2CSC|A Chain A, Structure Of Ternary Complexes Of Citrate Synthase With
D-And L- Malate: Mechanistic Implications
pdb|3CSC|A Chain A, Structure Of Ternary Complexes Of Citrate Synthase With
D-And L- Malate: Mechanistic Implications
pdb|4CSC|A Chain A, Structure Of Ternary Complexes Of Citrate Synthase With
D-And L- Malate: Mechanistic Implications
pdb|5CTS|A Chain A, Proposed Mechanism For The Condensation Reaction Of
Citrate Synthase. 1.9-Angstroms Structure Of The Ternary
Complex With Oxaloacetate And Carboxymethyl Coenzyme A
pdb|6CTS|A Chain A, Proposed Mechanism For The Condensation Reaction Of
Citrate Synthase. 1.9-Angstroms Structure Of The Ternary
Complex With Oxaloacetate And Carboxymethyl Coenzyme A
pdb|5CSC|A Chain A, Structure Of An Open Form Of Chicken Heart Citrate
Synthase At 2.8 Angstroms Resolution
Length = 433
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 14/87 (16%)
Query: 222 QKTPGGLLWFQ-----------PWIKLQYAATATF---VVTVCSNYLTAAHASIQCSGGL 267
+ P GL W W+ ++A A VVT+ N+ T H Q S +
Sbjct: 86 EPLPEGLFWLLVTGQIPTGAQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAI 145
Query: 268 VQPSDLMDLARSQADYILRKNPKEMSY 294
+ + AR+ A+ ILR EM Y
Sbjct: 146 TALNSESNFARAYAEGILRTKYWEMVY 172
>pdb|5CSC|B Chain B, Structure Of An Open Form Of Chicken Heart Citrate
Synthase At 2.8 Angstroms Resolution
Length = 429
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 240 AATATFVVTVCSNYLTAAHASIQCSGGLVQPSDLMDLARSQADYILRKNPKEMSY 294
AA + VVT+ N+ T H Q S + + + AR+ A+ ILR EM Y
Sbjct: 117 AALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGILRTKYWEMVY 171
>pdb|4EWV|A Chain A, Crystal Structure Of Gh3.12 In Complex With Ampcpp
pdb|4EWV|B Chain B, Crystal Structure Of Gh3.12 In Complex With Ampcpp
pdb|4EPM|A Chain A, Crystal Structure Of Arabidopsis Gh3.12 (Pbs3) In Complex
With Amp
pdb|4EQL|A Chain A, Crystal Structure Of Gh3.12 In Complex With Amp And
Salicylate
pdb|4EQL|B Chain B, Crystal Structure Of Gh3.12 In Complex With Amp And
Salicylate
Length = 581
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 19/81 (23%)
Query: 81 QLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHRATNDQ--------TYLNY 132
Q F R L + ++P++ YED +L R N + T +
Sbjct: 50 QRFLIDRFDKELFKKNVPIV-------SYED----IKPYLDRVVNGESSDVISARTITGF 98
Query: 133 LVSTGKTGGTRSLFAWDDKYV 153
L+S+G +GG + + W++KY+
Sbjct: 99 LLSSGTSGGAQKMMPWNNKYL 119
>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The
Thermoacidophilic Alicyclobacillus Acidocaldarius
pdb|3GZK|A Chain A, Structure Of A. Acidocaldarius Cellulase Cela
pdb|3H2W|A Chain A, Structure Of A. Acidocaldarius Cellulase Cela In Complex
With Cellobiose
pdb|3H3K|A Chain A, Structure Of A. Acidocaldarius Cellulase Cela In Complex
With Cellotetraose
pdb|3RX5|A Chain A, Structure Of Aacel9a In Complex With Cellotriose-Like
Isofagomine
pdb|3RX7|A Chain A, Structure Of Aacel9a In Complex With Cellotetraose-Like
Isofagomine
pdb|3RX8|A Chain A, Structure Of Aacel9a In Complex With Cellobiose-Like
Isofagomine
Length = 537
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 276 LARSQADYILRKNPKEMSYTVGFGANYPTQPNHR 309
+A+ ADY+ NP Y GFG P+HR
Sbjct: 430 VAQRAADYLFGANPLGQCYVTGFGQRPVRHPHHR 463
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,661,244
Number of Sequences: 62578
Number of extensions: 365556
Number of successful extensions: 725
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 689
Number of HSP's gapped (non-prelim): 21
length of query: 356
length of database: 14,973,337
effective HSP length: 100
effective length of query: 256
effective length of database: 8,715,537
effective search space: 2231177472
effective search space used: 2231177472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)