Your job contains 1 sequence.
>043276
GALNDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISP
LATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLL
RTLEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDA
TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF
VDGQLQSSAFEIINVNNGARGVGFWSPEKGLTQKLSSNSTTKSKLRPIIWPGDSTSDPKG
WEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDF
VPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPI
KDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHRVNEDFRGPARHQVGTSFWFS
FSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIK
RGDNVGYQKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPYAK
LLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKH
SSCPDAGTVVSARSLGLNSFWGLFLIAGIAAILALIIFLAVFVHEHWNVLKNSESSLLSR
IRIFLRIFVSRDLSAHTFKDKGGIQVHGMGPTEASPDSRYPASPSSYSQHADSHFLFYGE
QGTPRTESGNSNHNPNSQAQAPPEIVSAVELTNPDQEIARSPQVVRENN
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043276
(829 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2066107 - symbol:GLR2.7 "glutamate receptor 2.... 2060 9.0e-215 2
TAIR|locus:2066086 - symbol:GLR2.8 "glutamate receptor 2.... 2044 1.9e-211 1
TAIR|locus:2066148 - symbol:GLR2.9 "glutamate receptor 2.... 1986 2.6e-205 1
TAIR|locus:2047256 - symbol:GLR2.2 "glutamate receptor 2.... 1924 9.7e-199 1
TAIR|locus:2181196 - symbol:GLR2.1 "glutamate receptor 2.... 1894 1.5e-195 1
TAIR|locus:2047251 - symbol:GLR2.3 "glutamate receptor 2.... 1827 1.8e-188 1
TAIR|locus:2206095 - symbol:GLR3.3 "glutamate receptor 3.... 1165 2.6e-118 1
TAIR|locus:2207165 - symbol:GLR3.4 "AT1G05200" species:37... 1130 1.3e-114 1
TAIR|locus:2122128 - symbol:GLUR2 "glutamate receptor 2" ... 1106 4.6e-112 1
TAIR|locus:2081805 - symbol:GLR3.6 "glutamate receptor 3.... 1071 2.4e-108 1
TAIR|locus:2062586 - symbol:GLR5 "glutamate receptor 5" s... 995 2.7e-100 1
TAIR|locus:2079681 - symbol:GLR1.4 "glutamate receptor 1.... 747 4.7e-99 2
TAIR|locus:2166001 - symbol:ATGLR1.2 species:3702 "Arabid... 758 3.3e-98 2
TAIR|locus:2166006 - symbol:GLR1.3 "glutamate receptor 1.... 733 1.4e-95 2
TAIR|locus:2102975 - symbol:GLR1.1 "glutamate receptor 1.... 460 2.3e-69 3
UNIPROTKB|E1BGZ0 - symbol:GRIA3 "Uncharacterized protein"... 154 5.1e-22 3
UNIPROTKB|F5H470 - symbol:GRIA3 "Glutamate receptor 3" sp... 154 5.7e-22 3
RGD|70958 - symbol:Gria3 "glutamate receptor, ionotropic,... 154 6.0e-22 3
UNIPROTKB|P19492 - symbol:Gria3 "Glutamate receptor 3" sp... 154 6.0e-22 3
UNIPROTKB|F1RU73 - symbol:LOC100519996 "Uncharacterized p... 155 6.4e-22 3
UNIPROTKB|G3V6Z5 - symbol:Gria3 "Glutamate receptor, iono... 155 7.5e-22 3
UNIPROTKB|E2RHU1 - symbol:GRIA3 "Uncharacterized protein"... 155 7.7e-22 3
UNIPROTKB|P42263 - symbol:GRIA3 "Glutamate receptor 3" sp... 154 7.8e-22 3
UNIPROTKB|G3V8Y9 - symbol:Gria3 "Glutamate receptor 3" sp... 154 9.7e-22 3
UNIPROTKB|F1P0S5 - symbol:GRIA3 "Uncharacterized protein"... 152 1.1e-21 3
MGI|MGI:95810 - symbol:Gria3 "glutamate receptor, ionotro... 155 1.2e-21 3
MGI|MGI:95813 - symbol:Grid2 "glutamate receptor, ionotro... 233 2.2e-21 2
RGD|68368 - symbol:Grid2 "glutamate receptor, ionotropic,... 233 2.2e-21 2
UNIPROTKB|Q63226 - symbol:Grid2 "Glutamate receptor ionot... 233 2.2e-21 2
UNIPROTKB|Q38PU6 - symbol:GRIA3 "Glutamate receptor 3" sp... 153 3.3e-21 3
ZFIN|ZDB-GENE-030616-53 - symbol:gria3b "glutamate recept... 193 7.4e-21 2
UNIPROTKB|F1NAD5 - symbol:GRID2 "Uncharacterized protein"... 231 1.1e-20 2
UNIPROTKB|F1P2J9 - symbol:GRIN1 "Uncharacterized protein"... 225 1.0e-19 3
UNIPROTKB|F1PEI5 - symbol:GRID2 "Uncharacterized protein"... 221 1.5e-19 2
UNIPROTKB|O43424 - symbol:GRID2 "Glutamate receptor ionot... 219 3.1e-19 2
UNIPROTKB|E7EMV5 - symbol:GRIA1 "Glutamate receptor 1" sp... 150 6.1e-19 3
ZFIN|ZDB-GENE-020125-5 - symbol:gria3a "glutamate recepto... 194 2.3e-18 2
ZFIN|ZDB-GENE-030131-8013 - symbol:gria4b "glutamate rece... 202 4.7e-18 2
UNIPROTKB|E9PH24 - symbol:GRID2 "Glutamate receptor ionot... 219 5.2e-18 2
ZFIN|ZDB-GENE-051202-2 - symbol:grin1b "glutamate recepto... 208 6.0e-18 3
ZFIN|ZDB-GENE-020125-1 - symbol:gria1a "glutamate recepto... 154 8.6e-18 3
UNIPROTKB|F1P2K1 - symbol:GRIN1 "Uncharacterized protein"... 225 1.1e-17 4
UNIPROTKB|F1NKY9 - symbol:GRIN1 "Uncharacterized protein"... 225 1.7e-17 4
UNIPROTKB|F1P2J8 - symbol:GRIN1 "Uncharacterized protein"... 225 2.3e-17 4
UNIPROTKB|F1NW92 - symbol:GRIA1 "Uncharacterized protein"... 204 3.1e-17 2
TIGR_CMR|SPO_3335 - symbol:SPO_3335 "glutamine ABC transp... 236 4.2e-17 1
UNIPROTKB|F1MCM2 - symbol:GRIK3 "Uncharacterized protein"... 183 7.3e-17 2
UNIPROTKB|F1SV43 - symbol:GRIK3 "Uncharacterized protein"... 183 7.3e-17 2
UNIPROTKB|J9NUD0 - symbol:GRIK3 "Uncharacterized protein"... 183 8.1e-17 2
UNIPROTKB|F1PWT6 - symbol:GRIK3 "Uncharacterized protein"... 183 8.2e-17 2
ZFIN|ZDB-GENE-020125-2 - symbol:gria1b "glutamate recepto... 145 1.1e-16 3
UNIPROTKB|F1P5Y1 - symbol:GRIA1 "Uncharacterized protein"... 204 1.3e-16 2
RGD|71027 - symbol:Grik3 "glutamate receptor, ionotropic,... 182 1.3e-16 2
UNIPROTKB|P42264 - symbol:Grik3 "Glutamate receptor ionot... 182 1.3e-16 2
UNIPROTKB|Q38PU3 - symbol:GRIK2 "Glutamate receptor ionot... 188 1.6e-16 2
UNIPROTKB|F1P0L4 - symbol:GRIK3 "Uncharacterized protein"... 181 1.6e-16 2
MGI|MGI:95816 - symbol:Grik3 "glutamate receptor, ionotro... 182 1.7e-16 2
UNIPROTKB|A2AVK2 - symbol:GRIN1 "Glutamate receptor ionot... 209 1.8e-16 3
UNIPROTKB|Q05586 - symbol:GRIN1 "Glutamate receptor ionot... 209 2.0e-16 3
UNIPROTKB|A9Z1Z8 - symbol:GRIK3 "Glutamate receptor, iono... 182 2.4e-16 2
MGI|MGI:95819 - symbol:Grin1 "glutamate receptor, ionotro... 209 2.6e-16 3
RGD|2736 - symbol:Grin1 "glutamate receptor, ionotropic, ... 209 2.6e-16 3
UNIPROTKB|P35439 - symbol:Grin1 "Glutamate receptor ionot... 209 2.6e-16 3
MGI|MGI:95815 - symbol:Grik2 "glutamate receptor, ionotro... 185 2.6e-16 2
UNIPROTKB|Q13003 - symbol:GRIK3 "Glutamate receptor ionot... 182 2.7e-16 2
UNIPROTKB|F8WEZ8 - symbol:GRIK2 "Glutamate receptor ionot... 185 2.8e-16 2
UNIPROTKB|Q13002 - symbol:GRIK2 "Glutamate receptor ionot... 185 3.3e-16 2
UNIPROTKB|Q38PU2 - symbol:GRIK3 "Glutamate receptor ionot... 182 3.5e-16 2
UNIPROTKB|F1LP48 - symbol:Grik2 "Glutamate receptor ionot... 184 3.7e-16 2
UNIPROTKB|F1NU20 - symbol:GRIK2 "Uncharacterized protein"... 186 3.7e-16 2
RGD|2733 - symbol:Grik2 "glutamate receptor, ionotropic, ... 184 4.2e-16 2
UNIPROTKB|P42260 - symbol:Grik2 "Glutamate receptor ionot... 184 4.2e-16 2
UNIPROTKB|B7Z1W1 - symbol:GRIA1 "Glutamate receptor 1" sp... 198 4.8e-16 2
UNIPROTKB|J9NWC8 - symbol:GRIN1 "Glutamate receptor ionot... 209 5.5e-16 3
UNIPROTKB|F1LNE4 - symbol:Gria2 "Glutamate receptor 2" sp... 189 6.2e-16 2
UNIPROTKB|F1PDR1 - symbol:GRIA1 "Uncharacterized protein"... 198 6.8e-16 2
UNIPROTKB|F1P7K5 - symbol:GRIK2 "Uncharacterized protein"... 185 7.3e-16 2
UNIPROTKB|F1P7K6 - symbol:GRIK2 "Uncharacterized protein"... 185 8.1e-16 2
UNIPROTKB|F1MG21 - symbol:GRIK2 "Uncharacterized protein"... 185 8.5e-16 2
UNIPROTKB|F8W7L6 - symbol:GRIA2 "Glutamate receptor 2" sp... 189 9.0e-16 2
UNIPROTKB|F1P0E1 - symbol:GRIA4 "Uncharacterized protein"... 198 9.1e-16 2
UNIPROTKB|F1N982 - symbol:GRIA4 "Uncharacterized protein"... 198 9.1e-16 2
UNIPROTKB|F1PDP9 - symbol:GRIA1 "Uncharacterized protein"... 198 9.6e-16 2
UNIPROTKB|P42261 - symbol:GRIA1 "Glutamate receptor 1" sp... 198 9.6e-16 2
UNIPROTKB|Q38PU8 - symbol:GRIA1 "Glutamate receptor 1" sp... 198 9.6e-16 2
UNIPROTKB|G3V914 - symbol:Gria2 "Glutamate receptor 2" sp... 189 9.7e-16 2
MGI|MGI:95809 - symbol:Gria2 "glutamate receptor, ionotro... 189 9.7e-16 2
RGD|61862 - symbol:Gria2 "glutamate receptor, ionotropic,... 189 9.7e-16 2
UNIPROTKB|G3V938 - symbol:Gria2 "Glutamate receptor, iono... 189 9.7e-16 2
UNIPROTKB|P19491 - symbol:Gria2 "Glutamate receptor 2" sp... 189 9.7e-16 2
UNIPROTKB|F1N3G8 - symbol:GRIA1 "Uncharacterized protein"... 198 9.7e-16 2
UNIPROTKB|B7Z9G9 - symbol:GRIA1 "cDNA, FLJ78833, highly s... 198 9.9e-16 2
UNIPROTKB|E7ESV8 - symbol:GRIA1 "Glutamate receptor 1" sp... 198 9.9e-16 2
UNIPROTKB|F1LPK4 - symbol:Gria2 "Glutamate receptor 2" sp... 189 1.0e-15 3
UNIPROTKB|F1P0E2 - symbol:GRIA4 "Uncharacterized protein"... 198 1.2e-15 2
UNIPROTKB|A8MT92 - symbol:GRIA2 "Glutamate receptor 2" sp... 189 1.3e-15 2
UNIPROTKB|F1PY46 - symbol:GRIN1 "Glutamate receptor ionot... 209 1.6e-15 3
ZFIN|ZDB-GENE-051202-1 - symbol:grin1a "glutamate recepto... 206 1.6e-15 3
UNIPROTKB|Q5VSF9 - symbol:GRIN1 "Glutamate receptor ionot... 209 1.6e-15 3
UNIPROTKB|P42262 - symbol:GRIA2 "Glutamate receptor 2" sp... 189 1.6e-15 2
WARNING: Descriptions of 195 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2066107 [details] [associations]
symbol:GLR2.7 "glutamate receptor 2.7" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005773 "vacuole" evidence=IDA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0034976 "response
to endoplasmic reticulum stress" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 GO:GO:0005773
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY495450
EMBL:AY072069 EMBL:AY080587 IPI:IPI00533666 PIR:T02742
RefSeq:NP_180476.3 UniGene:At.38520 ProteinModelPortal:Q8LGN0
PaxDb:Q8LGN0 PRIDE:Q8LGN0 EnsemblPlants:AT2G29120.1 GeneID:817460
KEGG:ath:AT2G29120 TAIR:At2g29120 eggNOG:NOG263961
InParanoid:Q8LGN0 OMA:DSENSFR PhylomeDB:Q8LGN0
ProtClustDB:CLSN2683703 Genevestigator:Q8LGN0 Uniprot:Q8LGN0
Length = 952
Score = 2060 (730.2 bits), Expect = 9.0e-215, Sum P(2) = 9.0e-215
Identities = 405/781 (51%), Positives = 544/781 (69%)
Query: 3 LNDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLA 62
L+DSSQV AI AI+K+FGWR V IYVDN++GE ++P LTDALQ + V R +I A
Sbjct: 153 LDDSSQVKAIAAIVKSFGWRNVVAIYVDNEFGEGILPLLTDALQDVQAFVVNRCLIPQEA 212
Query: 63 TDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRT 122
DDQI KELYKL TMQTRVF++HM P+LG R F+KA EIG+M +G VW++TDG+ NLL++
Sbjct: 213 NDDQILKELYKLMTMQTRVFVVHMPPTLGFRFFQKAREIGMMEEGYVWLLTDGVMNLLKS 272
Query: 123 LEP-SVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDAT 181
E S ++MQGV+GVR ++PK+K L+NFR+RW++ F ++ D E+NIF L AYD+
Sbjct: 273 NERGSSLENMQGVLGVRSHIPKSKKLKNFRLRWEKMFPKKGN---DEEMNIFALRAYDSI 329
Query: 182 SALAVAVEKAGITGFGFDKTNVS-SNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
+ALA+AVEK I +D S +N T+L G+S+ GP LL+ALS++RF GL G++
Sbjct: 330 TALAMAVEKTNIKSLRYDHPIASGNNKTNLGTLGVSRYGPSLLKALSNVRFNGLAGEFEL 389
Query: 241 VDGQLQSSAFEIINV-NNGARGVGFWSPEKGXXXXXXXXXXXXXXXR--PIIWPGDSTSD 297
++GQL+SS F++IN+ + R +G W P G R P+IWPG S
Sbjct: 390 INGQLESSVFDVINIIGSEERIIGLWRPSNGIVNAKSKNTTSVLGERLGPVIWPGKSKDV 449
Query: 298 PKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVA 357
PKGW+IPTN K LRVG+PVKKGF +FV IDP + + GY I++F+AV+++LPY+V
Sbjct: 450 PKGWQIPTNGKMLRVGIPVKKGFLEFVDAKIDPISNAMTPTGYCIEIFEAVLKKLPYSVI 509
Query: 358 YDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMI 417
++ + PD +Y++++YQV+ G +DAVVGD TIV NRS YVDFTLPYTESGVSM+
Sbjct: 510 PKYIAFLSPDE----NYDEMVYQVYTGAYDAVVGDVTIVANRSLYVDFTLPYTESGVSMM 565
Query: 418 VPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHRVNEDFRGPARHQVGTSF 477
VP+KD+K N WVFL+P + DLWVT+ CFF+FIGF+VW+LEHRVN DFRGP HQ+GTSF
Sbjct: 566 VPLKDNK--NTWVFLRPWSLDLWVTTACFFVFIGFIVWILEHRVNTDFRGPPHHQIGTSF 623
Query: 478 WFSFSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNL 537
WF+FSTM F+ RE+V+SNLARFVV+VWCFVVL+LIQSYTA+LTS TV LQPT+T+
Sbjct: 624 WFAFSTMNFAHREKVVSNLARFVVLVWCFVVLVLIQSYTANLTSFFTVKLLQPTVTNWKD 683
Query: 538 LIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIP 597
LIK N+GYQ+G+FV +LK GFDE +L + S ECDELF +NG I A+FDE+
Sbjct: 684 LIKFNKNIGYQRGTFVRELLKSQGFDESQLKPFGSAVECDELF----SNGTITASFDEVA 739
Query: 598 YAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWF 657
Y K+++ Q+ SKYTMVEP+FKTAGFGF FP SPL DVS+AILNVT+G++M+ IE+ WF
Sbjct: 740 YIKVILSQNSSKYTMVEPSFKTAGFGFVFPKKSPLTDDVSRAILNVTQGEEMQHIENKWF 799
Query: 658 KKHSSCPDAGTVVSARSLGLNSFWXXXXXXXXXXXXXXXXXXXVFVHEHWNVL-KNSESS 716
KK ++CPD T +S+ L L+SFW F++EH + L +SE+S
Sbjct: 800 KKPNNCPDLNTSLSSNHLSLSSFWGLFLIAGIASFLALLIFVANFLYEHKHTLFDDSENS 859
Query: 717 LLSRIRIFLRIFVSRDLSAHTFKDKGGIQVHGMG-P-TE--ASP----DSRYPASPSSYS 768
+++ +R F +D+ +H FK+ VH + P T+ +SP + P SP Y
Sbjct: 860 FRGKLKFLVRNFDEKDIKSHMFKENA---VHNVSSPITQGSSSPLTDQSTPLPRSPEQYR 916
Query: 769 Q 769
+
Sbjct: 917 E 917
Score = 38 (18.4 bits), Expect = 9.0e-215, Sum P(2) = 9.0e-215
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 790 NSNHNPNSQAQAPPEIVSAVELTNPDQEIARSPQVVRE 827
N+ HN +S P S+ LT+ + RSP+ RE
Sbjct: 884 NAVHNVSS----PITQGSSSPLTDQSTPLPRSPEQYRE 917
>TAIR|locus:2066086 [details] [associations]
symbol:GLR2.8 "glutamate receptor 2.8" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828 GO:GO:0071230
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 eggNOG:NOG263961
ProtClustDB:CLSN2683703 EMBL:AJ311495 IPI:IPI00537052 PIR:T02741
RefSeq:NP_180475.2 UniGene:At.13039 ProteinModelPortal:Q9C5V5
EnsemblPlants:AT2G29110.1 GeneID:817459 KEGG:ath:AT2G29110
TAIR:At2g29110 InParanoid:Q9C5V5 OMA:DSEDSIW PhylomeDB:Q9C5V5
Genevestigator:Q9C5V5 GermOnline:AT2G29110 Uniprot:Q9C5V5
Length = 947
Score = 2044 (724.6 bits), Expect = 1.9e-211, P = 1.9e-211
Identities = 413/772 (53%), Positives = 531/772 (68%)
Query: 1 GALNDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISP 60
G ++DS QV AI AI ++FGWR V IYVDN+ GE ++P L DALQ D +V RSVI
Sbjct: 145 GTIDDSYQVKAIAAIFESFGWRSVVAIYVDNELGEGIMPYLFDALQ--DVQVD-RSVIPS 201
Query: 61 LATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLL 120
A DDQI KELYKL T QTRVF++HM L SRIFEKA EIG+M +G VW+MT+GMT+++
Sbjct: 202 EANDDQILKELYKLMTRQTRVFVVHMASRLASRIFEKATEIGMMEEGYVWLMTNGMTHMM 261
Query: 121 RTLEPSVT-DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYD 179
R + + +++ GV+GVR +VPK+K LE+FR+RWKR F +ENP L D +L+IFGL AYD
Sbjct: 262 RHIHHGRSLNTIDGVLGVRSHVPKSKGLEDFRLRWKRNFKKENPWLRD-DLSIFGLWAYD 320
Query: 180 ATSALAVAVEKAGITGFGFDKTNVSSN-ATDLEAFGISQNGPKLLQALSSIRFRGLTGDY 238
+T+ALA+AVEK I+ F ++ + SSN TDL +S+ GP LL+ALS IRF GL G +
Sbjct: 321 STTALAMAVEKTNISSFPYNNASGSSNNMTDLGTLHVSRYGPSLLEALSEIRFNGLAGRF 380
Query: 239 IFVDGQLQSSAFEIIN-VNNGARGVGFWSPEKGXXXXXXXXXXXXXXXR--PIIWPGDST 295
+D QL+S FEIIN V N R VGFW+P G R P+IWPG ST
Sbjct: 381 NLIDRQLESPKFEIINFVGNEERIVGFWTPSNGLVNVNSNKTTSFTGERFGPLIWPGKST 440
Query: 296 SDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYA 355
PKGWEIPTN KK++VGVPVKKGF +FV+V DP T T+ GY+ID+F+A +++LPY+
Sbjct: 441 IVPKGWEIPTNGKKIKVGVPVKKGFFNFVEVITDPITNITTPKGYAIDIFEAALKKLPYS 500
Query: 356 VAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVS 415
V + + PD Y+DL+Y+V G DAVVGD TI RS Y DFTLPYTESGVS
Sbjct: 501 VIPQYYRFESPDD----DYDDLVYKVDNGTLDAVVGDVTITAYRSLYADFTLPYTESGVS 556
Query: 416 MIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHRVNEDFRGPARHQVGT 475
M+VP++D++ +N WVFL+P DLWVT+ CFF+ IGFVVW+ EHRVN DFRGP HQ+GT
Sbjct: 557 MMVPVRDNENKNTWVFLKPWGLDLWVTTACFFVLIGFVVWLFEHRVNTDFRGPPHHQIGT 616
Query: 476 SFWFSFSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDV 535
SFWFSFSTMVF+ RE+V+SNLARFVV+VWCFVVL+L QSYTA+LTS LTV + QP +V
Sbjct: 617 SFWFSFSTMVFAHREKVVSNLARFVVVVWCFVVLVLTQSYTANLTSFLTVQRFQPAAINV 676
Query: 536 NLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDE 595
LIK GD VGYQ G+FV L + GF+ KL + S EEC L +NG I+AAFDE
Sbjct: 677 KDLIKNGDYVGYQHGAFVKDFLIKEGFNVSKLKPFGSSEECHALL----SNGSISAAFDE 732
Query: 596 IPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDA 655
+ Y + ++ Q+CSKY +VEPTFKTAGFGFAFP +SPL DVSKAILNVT+GD+M+ IE+
Sbjct: 733 VAYLRAILSQYCSKYAIVEPTFKTAGFGFAFPRNSPLTGDVSKAILNVTQGDEMQHIENK 792
Query: 656 WFKKHSSCPDAGTVVSARSLGLNSFWXXXXXXXXXXXXXXXXXXXVFVHEHWNVL-KNSE 714
WF K + CPD T +S+ L L SFW +F++E+ + L +SE
Sbjct: 793 WFMKQNDCPDPKTALSSNRLSLRSFWGLFLIAGIASFLALLIFVFLFLYENRHTLCDDSE 852
Query: 715 SSLLSRIRIFLRIFVSRDLSAHTFKDKGGIQVHGMGPTEASPDSRYPASPSS 766
S+ ++ R F +D+ +HTFK VH + +SP ++Y SPS+
Sbjct: 853 DSIWRKLTSLFRNFDEKDIKSHTFKSSA---VHHV----SSPMTQYIPSPST 897
>TAIR|locus:2066148 [details] [associations]
symbol:GLR2.9 "glutamate receptor 2.9" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030003 "cellular cation homeostasis" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
eggNOG:NOG263961 ProtClustDB:CLSN2683703 IPI:IPI00520184 PIR:T02740
RefSeq:NP_180474.1 UniGene:At.52963 ProteinModelPortal:O81078
IntAct:O81078 PaxDb:O81078 PRIDE:O81078 EnsemblPlants:AT2G29100.1
GeneID:817458 KEGG:ath:AT2G29100 TAIR:At2g29100 InParanoid:O81078
OMA:WIFTESA PhylomeDB:O81078 Genevestigator:O81078
GermOnline:AT2G29100 Uniprot:O81078
Length = 940
Score = 1986 (704.2 bits), Expect = 2.6e-205, P = 2.6e-205
Identities = 395/768 (51%), Positives = 531/768 (69%)
Query: 3 LNDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLA 62
++DSSQV AI +I K F WR V IYVDN++GE +P L DALQ ++ + RSVI P A
Sbjct: 144 IDDSSQVRAIASIFKFFRWRRVVAIYVDNEFGEGFMPFLFDALQDVEVK---RSVIPPEA 200
Query: 63 TDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRT 122
DD+I+KEL KL Q RVF++HM SL R+F+ A +IG+M +G VW+MT+GMT+++R
Sbjct: 201 IDDEIQKELRKLMERQARVFVVHMESSLALRVFQIARDIGMMEEGYVWLMTNGMTHMMRH 260
Query: 123 LEPSVT-DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDAT 181
+ + ++++GV+GVR +VPK+K L +FR+RWKR F +ENPS+ D +LN+F L AYD+
Sbjct: 261 INNGRSLNTIEGVLGVRSHVPKSKELGDFRLRWKRTFEKENPSMRD-DLNVFALWAYDSI 319
Query: 182 SALAVAVEKAGITGFGFDK-TNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
+ALA AVEKA +D + +S N TDL G+S GP L +A S +RF GL G++
Sbjct: 320 TALAKAVEKANTKSLWYDNGSTLSKNRTDLGNVGVSLYGPSLQKAFSEVRFNGLAGEFKL 379
Query: 241 VDGQLQSSAFEIIN-VNNGARGVGFWSPEKGXXXXXXXXXXXXXXXRPIIWPGDSTSDPK 299
+DGQLQS FEIIN V N R +GFW+P G P+IWPG S PK
Sbjct: 380 IDGQLQSPKFEIINFVGNEERIIGFWTPRDGLMDATSSNKKTLG---PVIWPGKSKIVPK 436
Query: 300 GWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYD 359
GWEIP KKLRVGVP+KKGF DFVKVTI+P T + + GY+I++F+A ++ELPY V +
Sbjct: 437 GWEIPG--KKLRVGVPMKKGFFDFVKVTINPITNKKTPTGYAIEIFEAALKELPYLVIPE 494
Query: 360 FVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVP 419
+V + P+ +YN+L+YQV+ +DAVVGD TI NRS Y DFTLP+TESGVSM+VP
Sbjct: 495 YVSFESPN-----NYNNLVYQVYDKTWDAVVGDITITANRSLYADFTLPFTESGVSMMVP 549
Query: 420 IKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHRVNEDFRGPARHQVGTSFWF 479
++D++ ++ WVFL+P + +LWVT+GCFF+FIGFVVW+ EHRVN DFRGP ++Q+GTS WF
Sbjct: 550 VRDNENKDTWVFLEPWSLELWVTTGCFFVFIGFVVWLFEHRVNTDFRGPPQYQIGTSLWF 609
Query: 480 SFSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLI 539
SFSTMVF+ RE V+SNLARFVV+VWCFVVL+L QSYTASLTS LTV LQPT+T+VN LI
Sbjct: 610 SFSTMVFAHRENVVSNLARFVVVVWCFVVLVLTQSYTASLTSFLTVQSLQPTVTNVNDLI 669
Query: 540 KRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPYA 599
K D VGYQ G+FV IL LGF E +L ++S ++ D+L KG + G IAAAFDE+ Y
Sbjct: 670 KNRDCVGYQGGAFVKDILLGLGFHEDQLKPFDSAKDADDLLSKGKSKG-IAAAFDEVAYL 728
Query: 600 KLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKK 659
K ++ Q CSKY MVEPTFKT GFGFAFP +SPL + S+AILN+T+ + ++IED WF K
Sbjct: 729 KAILSQSCSKYVMVEPTFKTGGFGFAFPKNSPLTGEFSRAILNLTQNNVTQQIEDRWFPK 788
Query: 660 HSSCPDAGTVVSARSLGLNSFWXXXXXXXXXXXXXXXXXXXVFVHEHWNVL-KNSESSLL 718
+ CPD T +S+ L L+SF +F++EH + L +SE SL
Sbjct: 789 KNDCPDPMTALSSNRLNLSSFLGLFLIAGTAISFSLLVFVALFLYEHRHTLGDDSEDSLW 848
Query: 719 SRIRIFLRIFVSRDLSAHTFKDKGGIQVHGMGPTEASPDSRYPASPSS 766
+++ +IF +D+++HTFK+ +H + +SP + SPS+
Sbjct: 849 RKLKFLFKIFDEKDMNSHTFKNSA---IHNI----SSPMTHKTPSPST 889
>TAIR|locus:2047256 [details] [associations]
symbol:GLR2.2 "glutamate receptor 2.2" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] InterPro:IPR001320 InterPro:IPR001638
Pfam:PF00060 Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262
GO:GO:0019722 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
EMBL:AC007266 GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558
KO:K05387 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 ProtClustDB:CLSN2683132 EMBL:AY072068
IPI:IPI00519275 PIR:B84640 RefSeq:NP_180048.1 UniGene:At.39113
ProteinModelPortal:Q9SHV1 PRIDE:Q9SHV1 EnsemblPlants:AT2G24720.1
GeneID:817008 KEGG:ath:AT2G24720 TAIR:At2g24720 eggNOG:NOG288203
InParanoid:Q9SHV1 OMA:EMPENSN PhylomeDB:Q9SHV1
Genevestigator:Q9SHV1 GermOnline:AT2G24720 Uniprot:Q9SHV1
Length = 920
Score = 1924 (682.3 bits), Expect = 9.7e-199, P = 9.7e-199
Identities = 372/692 (53%), Positives = 488/692 (70%)
Query: 5 DSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATD 64
DSSQV AI AIIK FGWRE VP+Y+DN +GE ++P LTD+LQ I+ R+PYRSVI ATD
Sbjct: 148 DSSQVHAIKAIIKLFGWREVVPVYIDNTFGEGIMPRLTDSLQDINVRIPYRSVIPLNATD 207
Query: 65 DQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
I EL K+ M TRVFI+HM SL S +F KA E+GLM G VWI+T+G+ + LR++
Sbjct: 208 QDISVELLKMMNMPTRVFIVHMSSSLASTVFIKAKELGLMKPGYVWILTNGVMDGLRSIN 267
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSAL 184
+ ++M+GV+G++ Y+PK+K LE FR RWKR+F P + ELN++GL AYDAT+AL
Sbjct: 268 ETGIEAMEGVLGIKTYIPKSKDLETFRSRWKRRF----PQM---ELNVYGLWAYDATTAL 320
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVDGQ 244
A+A+E AGI F + N ++L+ G+SQ GPKLLQ +S+++F+GL GD+ FV GQ
Sbjct: 321 AMAIEDAGINNMTFSNVDTGKNVSELDGLGLSQFGPKLLQTVSTVQFKGLAGDFHFVSGQ 380
Query: 245 LQSSAFEIIN-VNNGARGVGFWSPEKGXXX-------XXXXXXXXXXXXRPIIWPGDSTS 296
LQ S FEI+N + G R +GFW+ G + IIWPG++ S
Sbjct: 381 LQPSVFEIVNMIGTGERSIGFWTEGNGLVKKLDQEPRSIGTLSTWPDHLKHIIWPGEAVS 440
Query: 297 DPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAV 356
PKGWEIPTN KKLR+GVP + GF+D VKVT DP T T V G+ ID F+AVI+ +PY V
Sbjct: 441 VPKGWEIPTNGKKLRIGVPKRIGFTDLVKVTRDPITNSTVVKGFCIDFFEAVIQAMPYDV 500
Query: 357 AYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSM 416
+Y+F P+ +P+G +G++NDL++QV+LG+FDAVVGDTTI+ NRS++VDFTLP+ +SGV +
Sbjct: 501 SYEFFPFEKPNGEPAGNHNDLVHQVYLGQFDAVVGDTTILANRSSFVDFTLPFMKSGVGL 560
Query: 417 IVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHRVNEDFRGPARHQVGTS 476
IVP+KD KR+ + FL+PL+ +LW+T+ FF +G VW LEHRVN DFRGPA +Q T
Sbjct: 561 IVPLKDEVKRDKFSFLKPLSIELWLTTLVFFFLVGISVWTLEHRVNSDFRGPANYQASTI 620
Query: 477 FWFSFSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
FWF+FSTMVF+ RERV+S AR +V+ W FV+L+L QSYTASL SLLT QL PTIT ++
Sbjct: 621 FWFAFSTMVFAPRERVLSFGARSLVVTWYFVLLVLTQSYTASLASLLTSQQLNPTITSMS 680
Query: 537 LLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEI 596
L+ RG+ VGYQ+ SF+LG L + GF + LV +++ EECDEL +KG NGG+AAAF
Sbjct: 681 SLLHRGETVGYQRTSFILGKLNETGFPQSSLVPFDTAEECDELLKKGPKNGGVAAAFLGT 740
Query: 597 PYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW 656
PY +L +GQ+C+ Y MVE F GFGF FP+ SPLV DVS+AIL V E K E+E AW
Sbjct: 741 PYVRLFLGQYCNTYKMVEEPFNVDGFGFVFPIGSPLVADVSRAILKVAESPKAVELEHAW 800
Query: 657 FKK-HSSCPDAGT------VVSARSLGLNSFW 681
FKK SCPD T V+A LG+ SFW
Sbjct: 801 FKKKEQSCPDPVTNPDSNPTVTAIQLGVGSFW 832
>TAIR|locus:2181196 [details] [associations]
symbol:GLR2.1 "glutamate receptor 2.1" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030003 "cellular cation homeostasis" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AF007271 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
EMBL:AK228008 IPI:IPI00532199 PIR:T01809 RefSeq:NP_198062.2
UniGene:At.30826 ProteinModelPortal:O04660 IntAct:O04660
PaxDb:O04660 EnsemblPlants:AT5G27100.1 GeneID:832768
KEGG:ath:AT5G27100 TAIR:At5g27100 eggNOG:NOG323745
InParanoid:O04660 OMA:GWREVAP PhylomeDB:O04660
ProtClustDB:CLSN2683132 Genevestigator:O04660 GermOnline:AT5G27100
Uniprot:O04660
Length = 901
Score = 1894 (671.8 bits), Expect = 1.5e-195, P = 1.5e-195
Identities = 367/693 (52%), Positives = 482/693 (69%)
Query: 4 NDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLAT 63
+DSSQV AI IIK FGWRE P+YVD+ +GE ++P LTD LQ I+ R+PYR+VISP AT
Sbjct: 147 DDSSQVHAIKEIIKLFGWREVAPVYVDDTFGEGIMPRLTDVLQEINVRIPYRTVISPNAT 206
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTL 123
DD+I EL ++ T+ TRVF++H++ L SR F KA EIGLM +G VWI+T+ +T++L +
Sbjct: 207 DDEISVELLRMMTLPTRVFVVHLVELLASRFFAKATEIGLMKQGYVWILTNTITDVLSIM 266
Query: 124 EPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSA 183
+ ++MQGV+GV+ YVP++K LENFR RW ++F P ++LN++GL AYDAT+A
Sbjct: 267 NETEIETMQGVLGVKTYVPRSKELENFRSRWTKRF----PI---SDLNVYGLWAYDATTA 319
Query: 184 LAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVDG 243
LA+A+E+AG + F K + N ++L+ G+SQ GPKLLQ LS +RF+GL GD+ F++G
Sbjct: 320 LALAIEEAGTSNLTFVKMDAKRNVSELQGLGVSQYGPKLLQTLSRVRFQGLAGDFQFING 379
Query: 244 QLQSSAFEIINVNN-GARGVGFWSPEKGXX-------XXXXXXXXXXXXXRPIIWPGDST 295
+LQ S FEI+NVN G R +GFW E G RPIIWPGD+T
Sbjct: 380 ELQPSVFEIVNVNGQGGRTIGFWMKEYGLFKNVDQKPASKTTFSSWQDRLRPIIWPGDTT 439
Query: 296 SDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYA 355
S PKGWEIPTN K+L++GVPV F FVK T DP T T G+SID F+AVI+ +PY
Sbjct: 440 SVPKGWEIPTNGKRLQIGVPVNNTFQQFVKATRDPITNSTIFSGFSIDYFEAVIQAIPYD 499
Query: 356 VAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVS 415
++YDF+P+ G Y+ L+YQV+LG++DAVV DTTI NRS YVDF+LPYT SGV
Sbjct: 500 ISYDFIPF------QDGGYDALVYQVYLGKYDAVVADTTISSNRSMYVDFSLPYTPSGVG 553
Query: 416 MIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHRVNEDFRGPARHQVGT 475
++VP+KDS +R++ +FL PLT LW+ S F IG VVWVLEHRVN DF GP ++Q+ T
Sbjct: 554 LVVPVKDSVRRSSTIFLMPLTLALWLISLLSFFIIGLVVWVLEHRVNPDFDGPGQYQLST 613
Query: 476 SFWFSFSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDV 535
FWFSFS MVF+ RERV+S AR VVI+W F+VL+L QSYTASL SLLT L PT+T++
Sbjct: 614 IFWFSFSIMVFAPRERVLSFWARVVVIIWYFLVLVLTQSYTASLASLLTTQHLHPTVTNI 673
Query: 536 NLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDE 595
N L+ +G++VGYQ SF+LG L+ GF E LV Y S E CD L KG A GG++A E
Sbjct: 674 NSLLAKGESVGYQS-SFILGRLRDSGFSEASLVSYGSPEHCDALLSKGQAEGGVSAVLME 732
Query: 596 IPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDA 655
+PY ++ +GQ+C+KY MV+ FK G GF FP+ SPLV D+S+AIL V E +K ++E+A
Sbjct: 733 VPYVRIFLGQYCNKYKMVQTPFKVDGLGFVFPIGSPLVADISRAILKVEESNKANQLENA 792
Query: 656 WFKK-HSSCPDAGT------VVSARSLGLNSFW 681
WFK SCPD T VS R LG +SFW
Sbjct: 793 WFKPIDESCPDPLTNPDPNPSVSFRQLGFDSFW 825
>TAIR|locus:2047251 [details] [associations]
symbol:GLR2.3 "glutamate receptor 2.3" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 EMBL:AC007266 GO:GO:0071230
eggNOG:COG0683 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
ProtClustDB:CLSN2683132 IPI:IPI00526740 PIR:A84640
RefSeq:NP_180047.1 UniGene:At.52897 ProteinModelPortal:Q9SHV2
PaxDb:Q9SHV2 PRIDE:Q9SHV2 EnsemblPlants:AT2G24710.1 GeneID:817007
KEGG:ath:AT2G24710 TAIR:At2g24710 InParanoid:Q9SHV2 OMA:QASTICW
PhylomeDB:Q9SHV2 Genevestigator:Q9SHV2 GermOnline:AT2G24710
Uniprot:Q9SHV2
Length = 895
Score = 1827 (648.2 bits), Expect = 1.8e-188, P = 1.8e-188
Identities = 357/692 (51%), Positives = 473/692 (68%)
Query: 5 DSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATD 64
DS QV I AIIK FGWRE VP+Y+DN +GE ++P LTDALQ I+ R+PYRSVI+ ATD
Sbjct: 147 DSFQVQPIKAIIKLFGWREVVPVYIDNTFGEGIMPRLTDALQDINVRIPYRSVIAINATD 206
Query: 65 DQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
+I EL K+ M TRVF++HM L SR F KA E+GLM G VWI+T+G+ + L +
Sbjct: 207 HEISVELLKMMNMPTRVFLVHMYYDLASRFFIKAKELGLMEPGYVWILTNGVIDDLSLIN 266
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSAL 184
+ ++M+GV+G++ Y+PK+ LE FR RW+ F P + EL+++GL AYDAT+AL
Sbjct: 267 ETAVEAMEGVLGIKTYIPKSPDLEKFRSRWRSLF----PRV---ELSVYGLWAYDATTAL 319
Query: 185 AVAVEKAGITGFGFDKT-NVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVDG 243
AVA+E+AG F K + N ++LEA G+SQ GPKLLQ L +++FRGL G++ F G
Sbjct: 320 AVAIEEAGTNNMTFSKVVDTGRNVSELEALGLSQFGPKLLQTLLTVQFRGLAGEFRFFRG 379
Query: 244 QLQSSAFEIINV-NNGARGVGFWSPEKGX-------XXXXXXXXXXXXXXRPIIWPGDST 295
QLQ S FEI+N+ N G + +GFW G + I+WPG++
Sbjct: 380 QLQPSVFEIVNIINTGEKSIGFWKEGNGLVKKLDQQASSISALSTWKDHLKHIVWPGEAD 439
Query: 296 SDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYA 355
S PKGW+IPT KKLR+GVP + G++D VKVT DP T T V G+ ID F+AVI ELPY
Sbjct: 440 SVPKGWQIPTKGKKLRIGVPKRTGYTDLVKVTRDPITNSTVVTGFCIDFFEAVIRELPYD 499
Query: 356 VAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVS 415
V+Y+F+P+ +PDG ++G+YNDL+YQV+LG +DAVVGDTTI+ NRS+YVDFT P+ +SGV
Sbjct: 500 VSYEFIPFEKPDGKTAGNYNDLVYQVYLGRYDAVVGDTTILVNRSSYVDFTFPFIKSGVG 559
Query: 416 MIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHRVNEDFRGPARHQVGT 475
+IV + D KR+ +F++PL+W LW+TS F +G VWVLE++ N DF GP R Q T
Sbjct: 560 LIVEMTDPVKRDYILFMKPLSWKLWLTSFISFFLVGCTVWVLEYKRNPDFSGPPRFQAST 619
Query: 476 SFWFSFSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDV 535
WF+FSTMVF+ RERV S AR +VI W F+VL+L QSYTASL SLLT +L PTIT +
Sbjct: 620 ICWFAFSTMVFAPRERVFSFWARALVIAWYFLVLVLTQSYTASLASLLTSQKLNPTITSM 679
Query: 536 NLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDE 595
+ L+++G+ VGYQ+ SF+LG LK+ GF + LV +++ EECDEL KG GG++ AF E
Sbjct: 680 SSLLEKGETVGYQRTSFILGKLKERGFPQSSLVPFDTAEECDELLSKGPKKGGVSGAFLE 739
Query: 596 IPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDA 655
IPY +L +GQ C+ Y MVE F GFGF FP+ SPLV DVS+AIL V E K E+E A
Sbjct: 740 IPYLRLFLGQFCNTYKMVEEPFNVDGFGFVFPIGSPLVADVSRAILKVAESPKAMELERA 799
Query: 656 WFKK-HSSCPDAGT------VVSARSLGLNSF 680
WFKK SCPD T ++R L ++SF
Sbjct: 800 WFKKKEQSCPDPITNPDPNPSFTSRQLDIDSF 831
>TAIR|locus:2206095 [details] [associations]
symbol:GLR3.3 "glutamate receptor 3.3" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005262 "calcium channel activity"
evidence=IMP] [GO:0006816 "calcium ion transport" evidence=IMP]
[GO:0008066 "glutamate receptor activity" evidence=IMP] [GO:0071230
"cellular response to amino acid stimulus" evidence=IMP]
[GO:0009630 "gravitropism" evidence=IMP] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497
PRINTS:PR01176 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005262
GO:GO:0019722 GO:GO:0035235 GO:GO:0030288 GO:GO:0009630
InterPro:IPR001828 GO:GO:0071230 GO:GO:0004965 eggNOG:NOG316680
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AC025815
IPI:IPI00548873 PIR:C96495 RefSeq:NP_174978.1 UniGene:At.39090
ProteinModelPortal:Q9C8E7 TCDB:1.A.10.1.10 PaxDb:Q9C8E7
PRIDE:Q9C8E7 EnsemblPlants:AT1G42540.1 GeneID:840859
KEGG:ath:AT1G42540 TAIR:At1g42540 InParanoid:Q9C8E7 OMA:FTCERRV
PhylomeDB:Q9C8E7 ProtClustDB:CLSN2914596 ArrayExpress:Q9C8E7
Genevestigator:Q9C8E7 Uniprot:Q9C8E7
Length = 933
Score = 1165 (415.2 bits), Expect = 2.6e-118, P = 2.6e-118
Identities = 256/701 (36%), Positives = 378/701 (53%)
Query: 4 NDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISP--L 61
+D Q+ AI +I+ +GW+E + ++VD+ +G + +L D L + R+ Y++ + P
Sbjct: 144 SDLYQMDAIASIVDFYGWKEVIAVFVDDDFGRNGVAALNDKLASRRLRITYKAGLHPDTA 203
Query: 62 ATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLR 121
++I L K+ +Q R+ ++H+ LG +F++A +G+M G VWI TD ++ L
Sbjct: 204 VNKNEIMNMLIKIMLLQPRIVVIHVYSELGFAVFKEAKYLGMMGNGYVWIATDWLSTNLD 263
Query: 122 TLEPSVTD---SMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAY 178
+ P + ++QGV+ +RP+ P + F RW++ SL LN +GL AY
Sbjct: 264 SSSPLPAERLETIQGVLVLRPHTPDSDFKREFFKRWRK---MSGASL---ALNTYGLYAY 317
Query: 179 DATSALAVAVEKAGITGFGFDKTNVS-------SNATDLEAFGISQNGPKLLQALSSIRF 231
D+ LA ++K G +N S S +LEA + G LL+ + R
Sbjct: 318 DSVMLLARGLDKFFKDGGNISFSNHSMLNTLGKSGNLNLEAMTVFDGGEALLKDILGTRM 377
Query: 232 RGLTGDYIFV-DGQLQSSAFEIINV-NNGARGVGFWSPEKGXXXXXXXXXXXXX----XX 285
GLTG F D A++IINV G R +G+WS G
Sbjct: 378 VGLTGQLQFTPDRSRTRPAYDIINVAGTGVRQIGYWSNHSGLSTVLPELLYTKEKPNMST 437
Query: 286 RP----IIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYS 341
P +IWPG++ + P+GW N K+L++GVP++ + +FV + E G+
Sbjct: 438 SPKLKHVIWPGETFTKPRGWVFSNNGKELKIGVPLRVSYKEFVSQI---RGTENMFKGFC 494
Query: 342 IDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSN 401
IDVF A + LPYAV F+PY +G + SY ++ + G FD VVGD IV NR+
Sbjct: 495 IDVFTAAVNLLPYAVPVKFIPYG--NGKENPSYTHMVEMITTGNFDGVVGDVAIVTNRTK 552
Query: 402 YVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHRV 461
VDFT PY SG+ ++ P K AW FL+P +W +GC F+F+G VVW+LEHR
Sbjct: 553 IVDFTQPYAASGLVVVAPFKKLNS-GAWAFLRPFNRLMWAVTGCCFLFVGIVVWILEHRT 611
Query: 462 NEDFRGPARHQVGTSFWFSFSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYTASLTS 521
N++FRGP + Q T WFSFSTM F+ RE +S L R V+I+W FVVLI+ SYTASLTS
Sbjct: 612 NDEFRGPPKRQCVTILWFSFSTMFFAHRENTVSTLGRLVLIIWLFVVLIINSSYTASLTS 671
Query: 522 LLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILK-QLGFDERKLVVYNSHEECDELF 580
+LTV QL I + L +R D +GYQ GSF L+ +L E +LV + E +
Sbjct: 672 ILTVQQLSSPIKGIESLRERDDPIGYQVGSFAESYLRNELNISESRLVPLGTPEAYAKAL 731
Query: 581 QKGSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAI 640
+ G + GG+AA DE PY +L + +C+ Y +V F +G+GFAFP SPL D+S AI
Sbjct: 732 KDGPSKGGVAAIVDERPYVELFLSSNCA-YRIVGQEFTKSGWGFAFPRDSPLAIDLSTAI 790
Query: 641 LNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNSFW 681
L + E ++ I D W K++ + + S R L L SFW
Sbjct: 791 LELAENGDLQRIHDKWLMKNACTLENAELESDR-LHLKSFW 830
>TAIR|locus:2207165 [details] [associations]
symbol:GLR3.4 "AT1G05200" species:3702 "Arabidopsis
thaliana" [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005576 "extracellular region"
evidence=ISM] [GO:0006874 "cellular calcium ion homeostasis"
evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0019722
"calcium-mediated signaling" evidence=IDA] [GO:0070417 "cellular
response to cold" evidence=IEP] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0071260 "cellular
response to mechanical stimulus" evidence=IEP] [GO:0071311
"cellular response to acetate" evidence=IEP] [GO:0005262 "calcium
channel activity" evidence=IMP] [GO:0006816 "calcium ion transport"
evidence=IDA;IMP] [GO:0008066 "glutamate receptor activity"
evidence=IMP] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] [GO:0015276 "ligand-gated ion channel activity"
evidence=IDA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638
InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497 PRINTS:PR01176
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009507 GO:GO:0009611
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
GO:GO:0015276 GO:GO:0071260 GO:GO:0070417 InterPro:IPR001828
GO:GO:0071230 EMBL:AC000098 GO:GO:0004965 eggNOG:NOG316680
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 TCDB:1.A.10.1.10
EMBL:AY072070 EMBL:AK118206 EMBL:AF167355 IPI:IPI00517695
IPI:IPI00538965 PIR:D86186 PIR:T51135 RefSeq:NP_001030971.1
RefSeq:NP_172012.2 UniGene:At.10412 UniGene:At.66937
ProteinModelPortal:Q8GXJ4 PRIDE:Q8GXJ4 EnsemblPlants:AT1G05200.1
EnsemblPlants:AT1G05200.2 GeneID:839268 KEGG:ath:AT1G05200
GeneFarm:2532 TAIR:At1g05200 InParanoid:Q8GXJ4 OMA:WHLDEND
PhylomeDB:Q8GXJ4 ProtClustDB:CLSN2690705 Genevestigator:Q8GXJ4
GermOnline:AT1G05200 GO:GO:0071311 Uniprot:Q8GXJ4
Length = 959
Score = 1130 (402.8 bits), Expect = 1.3e-114, P = 1.3e-114
Identities = 256/701 (36%), Positives = 378/701 (53%)
Query: 4 NDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLAT 63
ND Q+ AI + GWR+ + I+VD++ G I L D L +R+ Y++ I+P A
Sbjct: 176 NDYFQMHAIADFLSYSGWRQVIAIFVDDECGRNGISVLGDVLAKKRSRISYKAAITPGAD 235
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTL 123
I L + M++RVF++H+ P G +F A +G+M G VWI TD + + ++
Sbjct: 236 SSSIRDLLVSVNLMESRVFVVHVNPDSGLNVFSVAKSLGMMASGYVWIATDWLPTAMDSM 295
Query: 124 EPSVTDSM---QGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDA 180
E +D+M QGV+ R Y ++ F RWK L+ N N + + AYD+
Sbjct: 296 EHVDSDTMDLLQGVVAFRHYTIESSVKRQFMARWKN--LRPNDGF-----NSYAMYAYDS 348
Query: 181 TSALAVAV-----EKAGITGFGFD----KTNVSSNATDLEAFGISQNGPKLLQALSSIRF 231
+A A+ E IT F D KTN S+ L A + G K ++ + +
Sbjct: 349 VWLVARALDVFFRENNNIT-FSNDPNLHKTNGST--IQLSALSVFNEGEKFMKIILGMNH 405
Query: 232 RGLTGDYIF-VDGQLQSSAFEIINVNNGA-RGVGFWSPEKGXXXXXXXX--------XXX 281
G+TG F D + A+E++N+ A R VG+WS G
Sbjct: 406 TGVTGPIQFDSDRNRVNPAYEVLNLEGTAPRTVGYWSNHSGLSVVHPETLYSRPPNTSTA 465
Query: 282 XXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYS 341
+ II+PG+ T P+GW P N K LR+GVP + ++D+V +P V GY
Sbjct: 466 NQRLKGIIYPGEVTKPPRGWVFPNNGKPLRIGVPNRVSYTDYVSKDKNPP----GVRGYC 521
Query: 342 IDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSN 401
IDVF+A IE LPY V ++ Y DG + SY++L+ +V FD VGD TIV NR+
Sbjct: 522 IDVFEAAIELLPYPVPRTYILYG--DGKRNPSYDNLVNEVVADNFDVAVGDITIVTNRTR 579
Query: 402 YVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHRV 461
YVDFT P+ ESG+ ++ P+K++K + W FL+P T ++W +G FF+F+G +VW+LEHR
Sbjct: 580 YVDFTQPFIESGLVVVAPVKEAKS-SPWSFLKPFTIEMWAVTGGFFLFVGAMVWILEHRF 638
Query: 462 NEDFRGPARHQVGTSFWFSFSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYTASLTS 521
N++FRGP R Q+ T FWFSFSTM FS RE +S+L RFV+I+W FVVLI+ SYTASLTS
Sbjct: 639 NQEFRGPPRRQLITIFWFSFSTMFFSHRENTVSSLGRFVLIIWLFVVLIINSSYTASLTS 698
Query: 522 LLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG-ILKQLGFDERKLVVYNSHEECDELF 580
+LT+ QL I ++ L+ + +G Q G+F ++ +L ++V E+
Sbjct: 699 ILTIRQLTSRIEGIDSLVTSNEPIGVQDGTFARNYLINELNILPSRIVPLKDEEQYLSAL 758
Query: 581 QKGSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAI 640
Q+G GG+AA DE+PY ++L+ K+ V F G+GFAF SPL D+S AI
Sbjct: 759 QRGPNAGGVAAIVDELPYIEVLLTNSNCKFRTVGQEFTRTGWGFAFQRDSPLAVDMSTAI 818
Query: 641 LNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNSFW 681
L ++E ++++I W C + L L SFW
Sbjct: 819 LQLSEEGELEKIHRKWLNYKHECSMQISNSEDSQLSLKSFW 859
>TAIR|locus:2122128 [details] [associations]
symbol:GLUR2 "glutamate receptor 2" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=IMP] [GO:0006883 "cellular sodium ion
homeostasis" evidence=IMP] [GO:0030007 "cellular potassium ion
homeostasis" evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060
Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 EMBL:AL022604
EMBL:AL161587 GO:GO:0071230 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000239558 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 EMBL:AF159498 EMBL:AF159499 EMBL:AY059778
IPI:IPI00535851 PIR:T06128 RefSeq:NP_567981.1 RefSeq:NP_974686.1
UniGene:At.2283 ProteinModelPortal:Q93YT1 PRIDE:Q93YT1
EnsemblPlants:AT4G35290.1 EnsemblPlants:AT4G35290.2 GeneID:829682
KEGG:ath:AT4G35290 TAIR:At4g35290 InParanoid:Q93YT1 OMA:MIDELNI
PhylomeDB:Q93YT1 ProtClustDB:CLSN2689771 Genevestigator:Q93YT1
GermOnline:AT4G35290 Uniprot:Q93YT1
Length = 912
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 254/709 (35%), Positives = 392/709 (55%)
Query: 2 ALNDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPL 61
A +D + AI +I +GW E + +Y D+ I +L D L+ ++ Y++V+ PL
Sbjct: 143 APSDLFLMRAIAEMISYYGWSEVIALYNDDDNSRNGITALGDELEGRRCKISYKAVL-PL 201
Query: 62 ----ATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMT 117
+ +I EL K+ M++RV I++ P G +IFE+A ++G+M KG VWI T +T
Sbjct: 202 DVVITSPREIINELVKIQGMESRVIIVNTFPKTGKKIFEEAQKLGMMEKGYVWIATTWLT 261
Query: 118 NLLRTLEP---SVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFG 174
+LL ++ P +S++GV+ +R + P +K ++F RW + N ++ LN++G
Sbjct: 262 SLLDSVNPLPAKTAESLRGVLTLRIHTPNSKKKKDFVARWNKL---SNGTV---GLNVYG 315
Query: 175 LLAYDATSALAVAVEK-----AGITGFGFDK--TNVSSNAT-DLEAFGISQNGPKLLQAL 226
L AYD +A AV++ A I+ F D T++ + +L A I G + L +
Sbjct: 316 LYAYDTVWIIARAVKRLLDSRANIS-FSSDPKLTSMKGGGSLNLGALSIFDQGSQFLDYI 374
Query: 227 SSIRFRGLTGDYIFV-DGQLQSSAFEIINV-NNGARGVGFWSPEKGXXXXXXXXXXXXXX 284
+ G+TG F+ D + +++IINV ++G R +G+WS G
Sbjct: 375 VNTNMTGVTGQIQFLPDRSMIQPSYDIINVVDDGFRQIGYWSNHSGLSIIPPESLYKKLS 434
Query: 285 XRP--------IIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETS 336
R + WPG ++ P+GW P N ++LR+GVP + F +FV +D +
Sbjct: 435 NRSSSNQHLNNVTWPGGTSETPRGWVFPNNGRRLRIGVPDRASFKEFVS-RLDGSNK--- 490
Query: 337 VVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIV 396
V GY+IDVF+A ++ + Y V ++FV + DG + ++N+ + V +G FDAVVGD IV
Sbjct: 491 VQGYAIDVFEAAVKLISYPVPHEFVLFG--DGLKNPNFNEFVNNVTIGVFDAVVGDIAIV 548
Query: 397 FNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWV 456
R+ VDFT PY ESG+ ++ P+ W FL+P T +W + FF+ +G V+W+
Sbjct: 549 TKRTRIVDFTQPYIESGLVVVAPVTKLND-TPWAFLRPFTPPMWAVTAAFFLIVGSVIWI 607
Query: 457 LEHRVNEDFRGPARHQVGTSFWFSFSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYT 516
LEHR+N++FRGP R Q+ T WFSFSTM FS RE +S L R V+++W FVVLI+ SYT
Sbjct: 608 LEHRINDEFRGPPRKQIVTILWFSFSTMFFSHRENTVSTLGRAVLLIWLFVVLIITSSYT 667
Query: 517 ASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG-ILKQLGFDERKLVVYNSHEE 575
ASLTS+LTV QL I V+ LI VG+Q GS+ ++ +L +LV S +E
Sbjct: 668 ASLTSILTVQQLNSPIRGVDTLISSSGRVGFQVGSYAENYMIDELNIARSRLVPLGSPKE 727
Query: 576 CDELFQKGSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHD 635
Q NG +AA DE PY L + + C + + F +G+GFAFP SPL D
Sbjct: 728 YAAALQ----NGTVAAIVDERPYVDLFLSEFCG-FAIRGQEFTRSGWGFAFPRDSPLAID 782
Query: 636 VSKAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVS---ARSLGLNSFW 681
+S AIL ++E ++++I D W + S+C + VS + L L SFW
Sbjct: 783 MSTAILGLSETGQLQKIHDKWLSR-SNCSNLNGSVSDEDSEQLKLRSFW 830
>TAIR|locus:2081805 [details] [associations]
symbol:GLR3.6 "glutamate receptor 3.6" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638
InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497 PRINTS:PR01176
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0071230
EMBL:AL133452 GO:GO:0004965 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:BT004264 IPI:IPI00517161
PIR:T45779 RefSeq:NP_190716.3 UniGene:At.35384
ProteinModelPortal:Q84W41 EnsemblPlants:AT3G51480.1 GeneID:824311
KEGG:ath:AT3G51480 TAIR:At3g51480 InParanoid:Q84W41 OMA:FTKNGWG
PhylomeDB:Q84W41 ProtClustDB:CLSN2918557 Genevestigator:Q84W41
GermOnline:AT3G51480 Uniprot:Q84W41
Length = 903
Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
Identities = 244/694 (35%), Positives = 364/694 (52%)
Query: 4 NDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLAT 63
ND Q+ AI I++ +GWRE V IY D+ YG + +L D L R+ Y++ + P T
Sbjct: 145 NDLFQMAAIADIVQFYGWREVVAIYGDDDYGRNGVAALGDRLSEKRCRISYKAALPPAPT 204
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTL 123
+ I L K+ ++R+ ++H G +F A +G+M+ G VWI T+ ++ ++ T
Sbjct: 205 RENITDLLIKVALSESRIIVVHASFIWGLELFNVARNLGMMSTGYVWIATNWLSTIIDTD 264
Query: 124 EPSVTDSM---QGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDA 180
P D++ QGVI +R + P + +NF RW +L L+ + L AYD
Sbjct: 265 SPLPLDTINNIQGVITLRLHTPNSIMKQNFVQRWH--------NLTHVGLSTYALYAYDT 316
Query: 181 TSALAVAVE----KAGITGFGFDK--TNVSSNATDLEAFGISQNGPKLLQALSSIRFRGL 234
LA A++ K G F + + + L+A + G L+++ + GL
Sbjct: 317 VWLLAQAIDDFFKKGGNVSFSKNPIISELGGGNLHLDALKVFDGGKIFLESILQVDRIGL 376
Query: 235 TGDYIFV-DGQLQSSAFEIINV-NNGARGVGFWSPEKGXXXXXXXXXXXXXXX----RPI 288
TG F D L + AF+++NV G +G+W G +
Sbjct: 377 TGRMKFTSDRNLVNPAFDVLNVIGTGYTTIGYWFNHSGLSVMPADEMENTSFSGQKLHSV 436
Query: 289 IWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAV 348
+WPG S P+GW N + LR+GVP + F + V V + G+ +DVF A
Sbjct: 437 VWPGHSIKIPRGWVFSNNGRHLRIGVPNRYRFEEVVSVK-----SNGMITGFCVDVFIAA 491
Query: 349 IEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLP 408
I LPYAV ++ V + +G + S ++L+ + G +DA VGD TI+ R+ DFT P
Sbjct: 492 INLLPYAVPFELVAFG--NGHDNPSNSELVRLITTGVYDAGVGDITIITERTKMADFTQP 549
Query: 409 YTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHRVNEDFRGP 468
Y ESG+ ++ P++ +A FL+P T +W+ + F+ +G V+W LEH+ N++FRGP
Sbjct: 550 YVESGLVVVAPVRKLGS-SAMAFLRPFTPQMWLIAAASFLIVGAVIWCLEHKHNDEFRGP 608
Query: 469 ARHQVGTSFWFSFSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQL 528
R QV T+FWFSFST+ FS RE SNL R V+I+W FVVLI+ SYTASLTS+LTV QL
Sbjct: 609 PRRQVITTFWFSFSTLFFSHRETTTSNLGRIVLIIWLFVVLIINSSYTASLTSILTVHQL 668
Query: 529 QPTITDVNLLIKRGDNVGYQKGSFVLG-ILKQLGFDERKLVVYNSHEECDELFQKGSANG 587
I + L D +GY +GSFV ++ +L +LV S EE D+ + G G
Sbjct: 669 SSPIKGIETLQTNHDPIGYPQGSFVRDYLIHELNIHVSRLVPLRSPEEYDKALRDGPGKG 728
Query: 588 GIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGD 647
G+AA DE Y +L + C ++ +V F G+GFAFP +SPL DVS AIL ++E
Sbjct: 729 GVAAVVDERAYIELFLSNRC-EFGIVGQEFTKNGWGFAFPRNSPLAVDVSAAILQLSENG 787
Query: 648 KMKEIEDAWFKKHSSCPDAGTVVSARSLGLNSFW 681
M+ I D W + +C G + L L SFW
Sbjct: 788 DMQRIRDKWLLR-KACSLQGAEIEVDRLELKSFW 820
>TAIR|locus:2062586 [details] [associations]
symbol:GLR5 "glutamate receptor 5" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497
PRINTS:PR01176 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0009506 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AC005700 GO:GO:0004965
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AF210701
IPI:IPI00548986 PIR:F84732 PIR:T51136 RefSeq:NP_565744.1
UniGene:At.13201 ProteinModelPortal:Q9SDQ4 SMR:Q9SDQ4 IntAct:Q9SDQ4
PaxDb:Q9SDQ4 PRIDE:Q9SDQ4 EnsemblPlants:AT2G32400.1 GeneID:817801
KEGG:ath:AT2G32400 GeneFarm:2534 TAIR:At2g32400 eggNOG:NOG282132
InParanoid:Q9SDQ4 OMA:NSSHRIQ PhylomeDB:Q9SDQ4
ProtClustDB:CLSN2688630 Genevestigator:Q9SDQ4 GermOnline:AT2G32400
Uniprot:Q9SDQ4
Length = 921
Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
Identities = 243/696 (34%), Positives = 363/696 (52%)
Query: 4 NDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLAT 63
ND+ Q+ A+ +I +GW+E + +Y D++ G + +L D L +R+ Y+ +S +
Sbjct: 146 NDAHQMSALVDLINFYGWKEVISVYSDDELGRNGVSALDDELYKKRSRISYKVPLSVHSD 205
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTL 123
+ + L K ++ RV+ILH P RIF+ A ++ +M VW+ TD ++ L +L
Sbjct: 206 EKFLTNALNKSKSIGPRVYILHFGPDPLLRIFDIAQKLQMMTHEYVWLATDWLSVTLDSL 265
Query: 124 EPSVT-DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
T ++GV+G+R ++P++ +E+F + LQ N S+ N + L AYD
Sbjct: 266 SDKGTLKRLEGVVGLRQHIPESVKMEHFTHK-----LQSNRSM-----NAYALHAYDTVW 315
Query: 183 ALAVAVEKA---GIT-GFGFDKTNVSSNATDL--EAFGISQNGPKLLQALSSIRFRGLTG 236
+A +E+ GI F + + + + T L E +G LL+ L + F G+ G
Sbjct: 316 MIAHGIEELLNEGINITFSYSEKLLHARGTKLHLEKIKFFNSGELLLEKLLKVNFTGIAG 375
Query: 237 DYIFVDGQ-LQSSAFEIINVNN-GARGVGFWSPEKGXXXXXXXXXXXXXXXR-------- 286
F G+ + +EIINVN VGFWS G
Sbjct: 376 QVQFGSGRNVIGCDYEIINVNKTDVHTVGFWSKNGGFSVVAPKTRHSQKKTSFVSDEKLG 435
Query: 287 PIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFK 346
I WPG P+GW I + L++ VP + F +FV + K + G+ IDVF
Sbjct: 436 DITWPGGGREKPRGWVIADSADPLKIVVPRRVSFVEFVT---EEKNSSHRIQGFCIDVFI 492
Query: 347 AVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFT 406
++ +PY+V Y F P+ +G SS +YN LI V G +DA VGD IV +RS VDF+
Sbjct: 493 EALKFVPYSVPYIFEPFG--NGHSSPNYNHLIQMVTDGVYDAAVGDIAIVPSRSKLVDFS 550
Query: 407 LPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHRVNEDFR 466
PY +G+ +++P D W+FL+P T LW F+ I V+W+LEHR+NEDFR
Sbjct: 551 QPYASTGLVVVIPANDDNA--TWIFLRPFTSRLWCVVLVSFLVIAVVIWILEHRINEDFR 608
Query: 467 GPARHQVGTSFWFSFSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVD 526
GP R Q+ T FSFST+ +E ISNLAR V+IVW F++++L SYTA+LTS+LTV
Sbjct: 609 GPPRRQLSTMLLFSFSTLFKRNQEDTISNLARLVMIVWLFLLMVLTASYTANLTSILTVQ 668
Query: 527 QLQPTITDVNLLIKRGDNVGYQKGSFVLGILK-QLGFDERKLVVYNSHEECDELFQKGSA 585
QL IT ++ L +GYQ G+F L L LG +LV +S EE ++ + G
Sbjct: 669 QLPSAITGIDSLRASEVPIGYQAGTFTLEYLTYSLGMARSRLVPLDSTEEYEKALKLGPT 728
Query: 586 N-GGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVT 644
N GG+AA DE+PY +L + + + EP F G+GFAF SPL D+S AIL ++
Sbjct: 729 NWGGVAAIVDELPYIELFLAERTGFKIVGEP-FMHRGWGFAFKRDSPLAIDMSTAILKLS 787
Query: 645 EGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNSF 680
E K++EI W K + + L L SF
Sbjct: 788 ETRKLQEIRKKWLCKTNCAGKSNWNPEPNQLHLKSF 823
>TAIR|locus:2079681 [details] [associations]
symbol:GLR1.4 "glutamate receptor 1.4" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005261 "cation channel activity"
evidence=IDA] [GO:0005262 "calcium channel activity" evidence=IDA]
[GO:0006816 "calcium ion transport" evidence=IDA] [GO:0030003
"cellular cation homeostasis" evidence=RCA;IDA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AC009853 GO:GO:0030003
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
ProtClustDB:CLSN2684267 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY072066 EMBL:AY072067
IPI:IPI00529459 RefSeq:NP_187408.2 UniGene:At.40336
ProteinModelPortal:Q8LGN1 STRING:Q8LGN1 PaxDb:Q8LGN1 PRIDE:Q8LGN1
EnsemblPlants:AT3G07520.1 GeneID:819940 KEGG:ath:AT3G07520
TAIR:At3g07520 eggNOG:NOG295667 InParanoid:Q8LGN1 OMA:NENIGFF
PhylomeDB:Q8LGN1 ArrayExpress:Q8LGN1 Genevestigator:Q8LGN1
GermOnline:AT3G07520 Uniprot:Q8LGN1
Length = 861
Score = 747 (268.0 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 170/450 (37%), Positives = 251/450 (55%)
Query: 222 LLQAL-SSIRFRGLTGDYIFVDGQLQSSAFEIIN-VNNGARGVGFWSPEKGXXXXXXXXX 279
LL+A+ S + +GL+GD F+D + S FEI+N + G R VG W+
Sbjct: 355 LLEAIPESAKHKGLSGDIKFIDKKFISDKFEIVNMIGRGERSVGLWN-SGSFISNRRRRL 413
Query: 280 XXXXXXRPIIWPGDSTSDPKGWEIPTN----EKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
IIWPG ST PK + +KKLRV VP ++V D KT T
Sbjct: 414 SSTKALETIIWPGGSTRIPKIRSLKEKRHGKKKKLRVLVPAGNITPQILEVKTDFKTGVT 473
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFL--GEFDAVVGDT 393
+ GY IDVF+ I LP+ +++P+ P + +YNDL+Y ++ ++DA VGD
Sbjct: 474 AATGYCIDVFETSI--LPFNYEVEYIPW--PGAINYKNYNDLVYTLYSQKDKYDAAVGDI 529
Query: 394 TIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFV 453
TI NRS YVDFTLP+T+ G++++ +K ++ W+ +PLT LW+T FFI G +
Sbjct: 530 TITDNRSLYVDFTLPFTDMGLAVVT----AKDKSMWIIFKPLTLSLWLTIASFFILTGAI 585
Query: 454 VWVLEHRVNEDFRGPARHQVGTSFWFSFSTMVFSQRERVISNLARFVVIVWCFVVLILIQ 513
VW++E N DF+G Q+GT F FST+VF+ RER+ N++RFVVIVW F VLIL
Sbjct: 586 VWLIERHDNADFQGSCFQQIGTLLCFGFSTLVFAHRERLQHNMSRFVVIVWIFAVLILTS 645
Query: 514 SYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLG-FDERKLVVYNS 572
+YTA+LTS++TV Q++ +K +N+G+ S ++ F + Y
Sbjct: 646 NYTATLTSVMTVQQIRG--------LKSNENIGFFSASIAANVVNDNPTFQGPR---YKG 694
Query: 573 HEECDELFQKGSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPL 632
+ D+ F NG I+ DE+PY KL + +H S++ +VE T GFGFAF SPL
Sbjct: 695 LKTADD-FTNALRNGTISFIVDEVPYVKLFVAKHPSEFVIVETESVTNGFGFAFQKGSPL 753
Query: 633 VHDVSKAILNVTEGDKMKEIEDAWFKKHSS 662
V VS+ I + +K+K IE+ WF++ ++
Sbjct: 754 VQKVSREIEKLRRTEKLKAIENWWFQRQTT 783
Score = 256 (95.2 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 61/195 (31%), Positives = 96/195 (49%)
Query: 2 ALND-SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISP 60
A +D SS+ I A+ F WR AV IY D+ E I L Q + Y++ S
Sbjct: 158 ATHDTSSEAKGIAALFSNFDWRTAVLIYEDDDDWRESIQPLVGHFQQNAIHIEYKAEFSV 217
Query: 61 LATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLL 120
+ ++ I K+L K R+F+ H+ + +R+F A +G+M +G WI+T N
Sbjct: 218 SSNEECIMKQLRKFKASGIRIFVAHISERIANRLFPCARRLGMMEEGYAWILTARSMNNF 277
Query: 121 RTLEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDA 180
+ + M+GVIG + Y+P T+ L NF +RWKR E +++ + A+D
Sbjct: 278 QDTNYLAKEEMEGVIGFKSYIPLTEELHNFTLRWKRSLRLEEVV---TRMSVCSIWAHDI 334
Query: 181 TSALAVAVEKAGITG 195
+LA A E A + G
Sbjct: 335 AWSLARAAEVAKLPG 349
Score = 38 (18.4 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 174 GLLAYDATSALAVAVEKAGITG-FGF-DKTNVSSNATDLEAFGISQNGPKLLQALSSIRF 231
GL YD A+ + + G++G F DK +S + G + L + S I
Sbjct: 349 GLSVYDLLEAIPESAKHKGLSGDIKFIDKKFISDKFEIVNMIGRGERSVGLWNSGSFISN 408
Query: 232 R 232
R
Sbjct: 409 R 409
>TAIR|locus:2166001 [details] [associations]
symbol:ATGLR1.2 species:3702 "Arabidopsis thaliana"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0005217
"intracellular ligand-gated ion channel activity" evidence=ISS]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=ISM]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006865 "amino acid transport" evidence=RCA] [GO:0016036
"cellular response to phosphate starvation" evidence=RCA]
[GO:0019375 "galactolipid biosynthetic process" evidence=RCA]
[GO:0030003 "cellular cation homeostasis" evidence=RCA] [GO:0042631
"cellular response to water deprivation" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0071230 EMBL:AB020745
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
ProtClustDB:CLSN2684267 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY072064 EMBL:AY072065
IPI:IPI00536526 IPI:IPI00547562 RefSeq:NP_199651.1
RefSeq:NP_851155.1 UniGene:At.29852 ProteinModelPortal:Q9LV72
IntAct:Q9LV72 PRIDE:Q9LV72 EnsemblPlants:AT5G48400.2 GeneID:834895
KEGG:ath:AT5G48400 TAIR:At5g48400 eggNOG:NOG313824
InParanoid:Q9LV72 OMA:FNANEDY PhylomeDB:Q9LV72
Genevestigator:Q9LV72 GermOnline:AT5G48400 Uniprot:Q9LV72
Length = 867
Score = 758 (271.9 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 184/519 (35%), Positives = 275/519 (52%)
Query: 222 LLQALSSIRFRGLTGDYIFVDGQLQSSAFEIIN-VNNGARGVGFWSPEKGXXXXXXXXXX 280
LL+A+ RF+GL+G++ D +L S FEI+N + +G R VGFW+ G
Sbjct: 353 LLEAIKESRFKGLSGNFQLDDMKLLSDKFEIVNMIGSGERRVGFWN-SNGSFSNRRQLSS 411
Query: 281 XXXXXRPIIWPGDSTSDPKGWEI-PTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVV- 338
IIWPG S PKG + + KKLRV V F +KV DP T E ++V
Sbjct: 412 THDNLETIIWPGGSAQSPKGRSLRESGRKKLRVLVTSSNRFPRLMKVETDPITHEITIVE 471
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFL--GEFDAVVGDTTIV 396
G+ I+VF+A I Y V Y + + +GT+ Y L Y + ++DA VGD TI
Sbjct: 472 GFCIEVFQASIAPFNYEVEY--IRWL--NGTN---YTKLAYALHSQKDKYDAAVGDITIT 524
Query: 397 FNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWV 456
+RS YVDFTLPYTE G+ ++ +K+R+ WVF QPLT +LW+TS FF+ G +VW+
Sbjct: 525 SDRSMYVDFTLPYTEMGLGIVA----AKERSMWVFFQPLTPNLWITSAAFFVLTGIIVWL 580
Query: 457 LEHRVNEDFRGPARHQVGTSFWFSFSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYT 516
+E N++F+G Q+G WF FST+V++ RE++ NL+RFVV VW F VLIL+ SYT
Sbjct: 581 IERAENKEFQGSWPQQIGVVIWFGFSTLVYAHREKLQHNLSRFVVTVWVFAVLILVTSYT 640
Query: 517 ASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGI-LKQLGFDERKLVVYNSHEE 575
A+LTS++TV Q++ + D VG+ GS + L +L+ N+ E+
Sbjct: 641 ATLTSMMTVQQIRFNANE--------DYVGHLSGSLIANAALTNSSLRAMRLLGLNTSED 692
Query: 576 CDELFQKGSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHD 635
+ + N ++ E+PY K+L+G++ + MV+ T GFGF F S L +
Sbjct: 693 ----YAQALMNKSVSYIVSELPYLKILLGENPGHFLMVKTQSTTNGFGFMFQKGSELAPN 748
Query: 636 VSKAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNSFWXXXXXXXXXXXXXX 695
VS+ I + +++ E+E WF K P T ++ + L F
Sbjct: 749 VSREIAKLRTSERLNEMERRWFDKQ--LPYT-TDDTSNPITLYRFRGLFMITGVSFAFAL 805
Query: 696 XXXXXVFVHEHWNVLKNSESSLLS-RIRIFLRIFVSRDL 733
+++ E W +L NS + S R+R F RI +R +
Sbjct: 806 AVLLILWLRERWEILVNSVNIYFSQRLRHF-RILFTRTI 843
Score = 237 (88.5 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 53/189 (28%), Positives = 98/189 (51%)
Query: 4 NDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLAT 63
N +S+V ITA + F W + D+ E + + D + V + S ++
Sbjct: 154 NSASEVKGITAFLHGFDWNSVALVLEDHDDWRESMHFMVDHFHENNVHVQSKVAFSVTSS 213
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRT 122
+D + L +L + T VF++H+ + +R+F A ++G+M +G WI+T M++
Sbjct: 214 EDSLMDRLRELKDLGTTVFVVHLSEVIATRLFPCAEKLGMMGEGFAWILTSRSMSSFHDQ 273
Query: 123 LEPSVT-DSMQGVIGVRPYVPKTKALENFRVRWKRKF-LQENPSLFDAELNIFGLLAYDA 180
+T ++M+GV+G + Y+P +K L NF +RW++ ++E L+I G+ A+D
Sbjct: 274 FIDDLTKEAMEGVVGFKSYIPMSKELHNFTLRWRKTLPVEEVTGSEITRLSISGVWAHDV 333
Query: 181 TSALAVAVE 189
+LA A E
Sbjct: 334 AWSLASAAE 342
>TAIR|locus:2166006 [details] [associations]
symbol:GLR1.3 "glutamate receptor 1.3" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AB020745 GO:GO:0005234
HOGENOM:HOG000239558 KO:K05387 ProtClustDB:CLSN2684267
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
EMBL:AY091121 EMBL:AY142599 IPI:IPI00522082 RefSeq:NP_199652.1
UniGene:At.66754 UniGene:At.70447 ProteinModelPortal:Q9FH75
PRIDE:Q9FH75 EnsemblPlants:AT5G48410.1 GeneID:834896
KEGG:ath:AT5G48410 TAIR:At5g48410 eggNOG:NOG270167
InParanoid:Q9FH75 OMA:FRASISP PhylomeDB:Q9FH75
Genevestigator:Q9FH75 GermOnline:AT5G48410 Uniprot:Q9FH75
Length = 860
Score = 733 (263.1 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
Identities = 184/527 (34%), Positives = 272/527 (51%)
Query: 222 LLQALSSIRFRGLTGDYIFVDGQLQSSAFEIIN-VNNGARGVGFWSPEKGXXXXXXXXXX 280
LL+ ++ RF GL+GD+ D +L S+ FEIIN + + R VGF + G
Sbjct: 351 LLEEITKTRFNGLSGDFQLNDKKLLSNKFEIINMIGSSERRVGFLN-SNGSFSNRRHLSS 409
Query: 281 XXXXXRPIIWPGDSTSDPKGWE-IPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVG 339
IIWPG S PKG I ++ KKLRV V F +KV DP T E V G
Sbjct: 410 THNKLETIIWPGGSAQSPKGTSLIDSDRKKLRVLVTSSNRFPRLMKVETDPVTNELIVEG 469
Query: 340 YSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFL--GEFDAVVGDTTIVF 397
+ I+VF+A I Y V Y +P+ + +Y++L Y + ++DA VGD TI
Sbjct: 470 FCIEVFRASISPFNYEVEY--IPWL-----NGSNYDNLAYALHSQKDKYDAAVGDITITS 522
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVL 457
NRS YVDFTLP+TE G+ IV +K+ R+ WVF QPLT DLW+TS FF+ G +VW++
Sbjct: 523 NRSTYVDFTLPFTEMGLG-IVAVKE---RSMWVFFQPLTPDLWITSAFFFVLTGVIVWLI 578
Query: 458 EHRVNEDFRGPARHQVGTSFWFSFSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYTA 517
E N++F+G Q+G WF FST+V++ RE++ NL+RFVV VW F VLIL SYTA
Sbjct: 579 ERAENKEFQGSWPQQIGVVLWFGFSTLVYAHREKLKHNLSRFVVTVWVFAVLILTASYTA 638
Query: 518 SLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGI-LKQLGFDERKLVVYNSHEEC 576
+LTS++TV Q++ + D VG+ GS + + L + + NS +
Sbjct: 639 TLTSMMTVQQIRFNSNE--------DYVGHLSGSLIANVALTSSSLRAMRSLGLNSAAD- 689
Query: 577 DELFQKGSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDV 636
+ + N ++ DE+PY K+++G++ + + MV+ T GFGF F LV +V
Sbjct: 690 ---YAQALLNKTVSFVVDELPYLKVVLGENPTHFFMVKTQSTTNGFGFMFQKGFELVPNV 746
Query: 637 SKAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNSFWXXXXXXXXXXXXXXX 696
S+ I + +K+ E+E WF + P T ++ + L F
Sbjct: 747 SREISKLRTSEKLNEMEKRWFD--NQLPYT-TDDTSNPITLYRFRGLFIIIGVSFAFALA 803
Query: 697 XXXXVFVHEHWNVLKNSESSLLSRIRIFLRIFVSRDLSAHTFKDKGG 743
+ + + W +L ++ L R+R F RI R + D G
Sbjct: 804 VLVILCLRDKWEILVDN-LDLSQRLRHF-RIHFVRSIHTSPLDDPIG 848
Score = 237 (88.5 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
Identities = 56/190 (29%), Positives = 95/190 (50%)
Query: 2 ALNDS-SQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISP 60
A +DS S+ IT+ I F W +Y D+ E + L + RV + +
Sbjct: 153 ATHDSTSEAKGITSFINVFDWNSVALVYEDHDDWRESMQLLVEHFHENGVRVQSKVGFTV 212
Query: 61 LATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMT-DGMTNL 119
+++D + L +L + T VF++H+ + + +F A +GLM G VWI+T M +
Sbjct: 213 SSSEDFVMGRLQQLKDLGTTVFVVHLSEVIATHLFPCARRLGLMGDGFVWILTAKTMNSF 272
Query: 120 LRTLEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYD 179
++ +M+GV+G + Y+P + L+NF +RW++ E L L+I G+ A+D
Sbjct: 273 HENIDDFTKQAMEGVVGFKSYIPMSIELQNFTLRWRKSLPVEEAEL--TRLSISGIWAHD 330
Query: 180 ATSALAVAVE 189
ALA A E
Sbjct: 331 IAFALARAAE 340
>TAIR|locus:2102975 [details] [associations]
symbol:GLR1.1 "glutamate receptor 1.1" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0005261
"cation channel activity" evidence=IDA] [GO:0005262 "calcium
channel activity" evidence=IDA] [GO:0005267 "potassium channel
activity" evidence=IDA] [GO:0005272 "sodium channel activity"
evidence=IDA] [GO:0006813 "potassium ion transport" evidence=IDA]
[GO:0006814 "sodium ion transport" evidence=IDA] [GO:0006816
"calcium ion transport" evidence=IDA] [GO:0030003 "cellular cation
homeostasis" evidence=RCA;IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0006569 "tryptophan catabolic
process" evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic
process" evidence=RCA] [GO:0070838 "divalent metal ion transport"
evidence=RCA] [GO:0009416 "response to light stimulus"
evidence=IMP] InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060
Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0009737 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009738
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
GO:GO:0005267 GO:GO:0005272 InterPro:IPR001828 EMBL:AC016829
GO:GO:0071230 GO:GO:0030003 GO:GO:0005234 EMBL:AF079998
EMBL:AK117584 IPI:IPI00529222 PIR:T51138 RefSeq:NP_187061.1
UniGene:At.18800 ProteinModelPortal:Q9M8W7 STRING:Q9M8W7
TCDB:1.A.10.1.7 EnsemblPlants:AT3G04110.1 GeneID:819566
KEGG:ath:AT3G04110 GeneFarm:2528 TAIR:At3g04110 eggNOG:NOG253648
HOGENOM:HOG000239558 InParanoid:Q9M8W7 KO:K05387 OMA:IRFSENE
PhylomeDB:Q9M8W7 ProtClustDB:CLSN2684267 Genevestigator:Q9M8W7
GermOnline:AT3G04110 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 Uniprot:Q9M8W7
Length = 808
Score = 460 (167.0 bits), Expect = 2.3e-69, Sum P(3) = 2.3e-69
Identities = 103/248 (41%), Positives = 143/248 (57%)
Query: 286 RPIIWPGDSTSDPKGWEIPTN-EKK-LRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSID 343
R I+WPG S P+ + EKK LRV V V V DP+T +V G+ ++
Sbjct: 397 RQIVWPGRSRKIPRHRVLAEKGEKKVLRVLVTAGNKVPHLVSVRPDPETGVNTVSGFCVE 456
Query: 344 VFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFL--GEFDAVVGDTTIVFNRSN 401
VFK I P+ +F+PY G+ ++L Y + ++DA VGD TI NRS
Sbjct: 457 VFKTCIA--PFNYELEFIPYR-------GNNDNLAYLLSTQRDKYDAAVGDITITSNRSL 507
Query: 402 YVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHRV 461
YVDFTLPYT+ G+ I+ +K K + W F P LW+ SG FF+ G VVW++E V
Sbjct: 508 YVDFTLPYTDIGIG-ILTVK-KKSQGMWTFFDPFEKSLWLASGAFFVLTGIVVWLVERSV 565
Query: 462 NEDFRGPARHQVGTSFWFSFSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYTASLTS 521
N +F+G Q+ WF FST+VF+ RE++ +RF+VIVW FVVLIL SY+A+LTS
Sbjct: 566 NPEFQGSWGQQLSMMLWFGFSTIVFAHREKLQKMSSRFLVIVWVFVVLILTSSYSANLTS 625
Query: 522 LLTVDQLQ 529
T+ ++Q
Sbjct: 626 TKTISRMQ 633
Score = 274 (101.5 bits), Expect = 1.3e-47, Sum P(3) = 1.3e-47
Identities = 90/256 (35%), Positives = 121/256 (47%)
Query: 172 IFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRF 231
I GL A+D LA AVEK ++G K SSN +S + LL + RF
Sbjct: 309 IIGLRAHDIACILANAVEKFSVSG----KVEASSN--------VSAD---LLDTIRHSRF 353
Query: 232 RGLTGDYIFVDGQLQSSAFEIINVNNGA-RGVGFWSPEKGXXXXXXXXXXXXXXXRPIIW 290
+GL+GD D + S FEI+N+ R +G WS G R I+W
Sbjct: 354 KGLSGDIQISDNKFISETFEIVNIGREKQRRIGLWS---GGSFSQR---------RQIVW 401
Query: 291 PGDSTSDPKGWEIPTN-EKK-LRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAV 348
PG S P+ + EKK LRV V V V DP+T +V G+ ++VFK
Sbjct: 402 PGRSRKIPRHRVLAEKGEKKVLRVLVTAGNKVPHLVSVRPDPETGVNTVSGFCVEVFKTC 461
Query: 349 IEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLP 408
I P+ +F+PY G + L Q ++DA VGD TI NRS YVDFTLP
Sbjct: 462 IA--PFNYELEFIPYR---GNNDNLAYLLSTQ--RDKYDAAVGDITITSNRSLYVDFTLP 514
Query: 409 YTESGVSMIVPIKDSK 424
YT+ G+ ++ K S+
Sbjct: 515 YTDIGIGILTVKKKSQ 530
Score = 227 (85.0 bits), Expect = 2.3e-69, Sum P(3) = 2.3e-69
Identities = 62/206 (30%), Positives = 107/206 (51%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLAT-- 63
+S+ IT++I+ F + V IY D E + L + Q + RS +++
Sbjct: 146 TSEAKGITSLIQDFSCKSVVVIYEDADDWSESLQILVENFQDKGIYIA-RSASFAVSSSG 204
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTL 123
++ + +L KL + VF++HM L SR+F+ ++GLM + WI+T N L
Sbjct: 205 ENHMMNQLRKLKVSRASVFVVHMSEILVSRLFQCVEKLGLMEEAFAWILTARTMNYLEHF 264
Query: 124 EPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSA 183
++T SMQGVIG + Y+P ++ ++NF R +++ + + + I GL A+D
Sbjct: 265 --AITRSMQGVIGFKSYIPVSEEVKNFTSRLRKRMGDDTETEHSSV--IIGLRAHDIACI 320
Query: 184 LAVAVEKAGITGFGFDKTNVSSNATD 209
LA AVEK ++G +NVS++ D
Sbjct: 321 LANAVEKFSVSGKVEASSNVSADLLD 346
Score = 131 (51.2 bits), Expect = 2.3e-69, Sum P(3) = 2.3e-69
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 566 KLVVYNSHEECDELFQKGSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFA 625
KL N+ E +L + G+ N I +EIPY +LIG + + + M + T GFGF
Sbjct: 650 KLGSINAVEAYAQLLRDGTLNHVI----NEIPYLSILIGNYPNDFVMTDRVTNTNGFGFM 705
Query: 626 FPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSS 662
F S LV VS+ I + +K++E WF+K S
Sbjct: 706 FQKGSDLVPKVSREIAKLRSLGMLKDMEKKWFQKLDS 742
Score = 37 (18.1 bits), Expect = 1.8e-49, Sum P(3) = 1.8e-49
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 288 IIWPGDSTSDPKG 300
I W D+TS+ KG
Sbjct: 139 IQWTHDTTSEAKG 151
>UNIPROTKB|E1BGZ0 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004971 "alpha-amino-3-hydroxy-5-methyl-4-isoxazole
propionate selective glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:MVQQFLQ EMBL:DAAA02067291 EMBL:DAAA02067292
EMBL:DAAA02067293 EMBL:DAAA02067294 IPI:IPI00692662
Ensembl:ENSBTAT00000015717 BindingDB:E1BGZ0 Uniprot:E1BGZ0
Length = 754
Score = 154 (59.3 bits), Expect = 5.1e-22, Sum P(3) = 5.1e-22
Identities = 71/236 (30%), Positives = 108/236 (45%)
Query: 455 WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMVFSQRERVIS--NLA-RFVVIVW 504
W LE NE+ R P ++ G S WFS F Q+ IS +L+ R V VW
Sbjct: 441 WHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVW 497
Query: 505 CFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDE 564
F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G K+ F
Sbjct: 498 WFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRR 553
Query: 565 RKLVVYN---SHEECDE--LFQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM 612
K+ VY S+ + E +F K +A+G + +A LL I Q TM
Sbjct: 554 SKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTM 613
Query: 613 -VEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
V + G+G A P S L + V+ A+L + E + ++++ W+ C G
Sbjct: 614 KVGGNLDSKGYGVATPKGSALRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 669
Score = 122 (48.0 bits), Expect = 5.1e-22, Sum P(3) = 5.1e-22
Identities = 53/260 (20%), Positives = 115/260 (44%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 7 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 64
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V
Sbjct: 65 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 121
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
+ G + + ++ F RW R +E P +A L L +DA +A A
Sbjct: 122 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 181
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-VDGQLQS 247
+ + + A SQ G + +AL ++ +G+TG+ F G+ +
Sbjct: 182 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 240
Query: 248 SAFEIINVN-NGARGVGFWS 266
++ + G+R G+W+
Sbjct: 241 YTIDVYEMKVTGSRKAGYWN 260
Score = 116 (45.9 bits), Expect = 5.1e-22, Sum P(3) = 5.1e-22
Identities = 42/170 (24%), Positives = 71/170 (41%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G D V TI
Sbjct: 313 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 371
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIG--- 451
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG
Sbjct: 372 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 428
Query: 452 --FVV-------WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMV 485
F+V W LE NE+ R P ++ G S WFS +
Sbjct: 429 VLFLVSRFSPYEWHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGAFM 477
Score = 38 (18.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 388 AVVGDTTIVFNRSNYVDFTLPY-TESGVSMIVPIKDSKKRNAW 429
A+ G + + F Y TE G S++ I ++ +N W
Sbjct: 4 ALKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNW 46
>UNIPROTKB|F5H470 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AL356213
EMBL:AL035426 EMBL:AL590139 EMBL:Z83848 EMBL:Z82899 HGNC:HGNC:4573
ChiTaRS:GRIA3 IPI:IPI01012695 ProteinModelPortal:F5H470 SMR:F5H470
Ensembl:ENST00000542149 ArrayExpress:F5H470 Bgee:F5H470
Uniprot:F5H470
Length = 824
Score = 154 (59.3 bits), Expect = 5.7e-22, Sum P(3) = 5.7e-22
Identities = 71/236 (30%), Positives = 108/236 (45%)
Query: 455 WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMVFSQRERVIS--NLA-RFVVIVW 504
W LE NE+ R P ++ G S WFS F Q+ IS +L+ R V VW
Sbjct: 581 WHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVW 637
Query: 505 CFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDE 564
F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G K+ F
Sbjct: 638 WFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRR 693
Query: 565 RKLVVYN---SHEECDE--LFQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM 612
K+ VY S+ + E +F K +A+G + +A LL I Q TM
Sbjct: 694 SKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTM 753
Query: 613 -VEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
V + G+G A P S L + V+ A+L + E + ++++ W+ C G
Sbjct: 754 KVGGNLDSKGYGVATPKGSALRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 809
Score = 123 (48.4 bits), Expect = 5.7e-22, Sum P(3) = 5.7e-22
Identities = 53/260 (20%), Positives = 116/260 (44%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 147 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 204
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V
Sbjct: 205 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 261
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
+ G + + ++ F RW R +E P +A L L +DA +A A
Sbjct: 262 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 321
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-VDGQLQS 247
+ + + A SQ G + +AL ++ +G+TG+ F G+ +
Sbjct: 322 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 380
Query: 248 SAFEIINVN-NGARGVGFWS 266
++ + +G+R G+W+
Sbjct: 381 YTIDVYEMKVSGSRKAGYWN 400
Score = 116 (45.9 bits), Expect = 5.7e-22, Sum P(3) = 5.7e-22
Identities = 42/170 (24%), Positives = 71/170 (41%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G D V TI
Sbjct: 453 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 511
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIG--- 451
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG
Sbjct: 512 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 568
Query: 452 --FVV-------WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMV 485
F+V W LE NE+ R P ++ G S WFS +
Sbjct: 569 VLFLVSRFSPYEWHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGAFM 617
Score = 38 (18.4 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 388 AVVGDTTIVFNRSNYVDFTLPY-TESGVSMIVPIKDSKKRNAW 429
A+ G + + F Y TE G S++ I ++ +N W
Sbjct: 144 ALKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNW 186
>RGD|70958 [details] [associations]
symbol:Gria3 "glutamate receptor, ionotropic, AMPA 3"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=TAS] [GO:0010226 "response to
lithium ion" evidence=IEP] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030425 "dendrite" evidence=IDA] [GO:0032279
"asymmetric synapse" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043083 "synaptic
cleft" evidence=IDA] [GO:0043195 "terminal bouton" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043198 "dendritic
shaft" evidence=IDA] [GO:0043204 "perikaryon" evidence=IDA]
[GO:0043234 "protein complex" evidence=IPI] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0060992 "response to
fungicide" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0014069
GO:GO:0060992 GO:GO:0010226 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0043195
GO:GO:0032281 GO:GO:0043083 GO:GO:0001919 InterPro:IPR001828
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 CTD:2892 KO:K05199 OrthoDB:EOG4XKV68 PDB:3LSW
PDB:3LSX PDBsum:3LSW PDBsum:3LSX EMBL:M36420 EMBL:X54656 EMBL:M38062
EMBL:M85036 IPI:IPI00195443 IPI:IPI00231095 PIR:C40170
RefSeq:NP_001106213.1 RefSeq:NP_116785.2 UniGene:Rn.74049 PDB:3DLN
PDB:3DP4 PDB:3M3F PDB:3M3K PDB:3O21 PDB:3P3W PDB:3RT6 PDB:3RT8
PDB:4F1Y PDB:4F22 PDB:4F29 PDB:4F2O PDB:4F2Q PDB:4F31 PDB:4F39
PDB:4F3B PDB:4F3G PDBsum:3DLN PDBsum:3DP4 PDBsum:3M3F PDBsum:3M3K
PDBsum:3O21 PDBsum:3P3W PDBsum:3RT6 PDBsum:3RT8 PDBsum:4F1Y
PDBsum:4F22 PDBsum:4F29 PDBsum:4F2O PDBsum:4F2Q PDBsum:4F31
PDBsum:4F39 PDBsum:4F3B PDBsum:4F3G ProteinModelPortal:P19492
SMR:P19492 IntAct:P19492 MINT:MINT-86220 STRING:P19492
PhosphoSite:P19492 PRIDE:P19492 GeneID:29628 KEGG:rno:29628
UCSC:RGD:70958 BindingDB:P19492 ChEMBL:CHEMBL3504
EvolutionaryTrace:P19492 NextBio:609848 ArrayExpress:P19492
Genevestigator:P19492 GermOnline:ENSRNOG00000007682 Uniprot:P19492
Length = 888
Score = 154 (59.3 bits), Expect = 6.0e-22, Sum P(3) = 6.0e-22
Identities = 71/236 (30%), Positives = 108/236 (45%)
Query: 455 WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMVFSQRERVIS--NLA-RFVVIVW 504
W LE NE+ R P ++ G S WFS F Q+ IS +L+ R V VW
Sbjct: 575 WHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVW 631
Query: 505 CFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDE 564
F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G K+ F
Sbjct: 632 WFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRR 687
Query: 565 RKLVVYN---SHEECDE--LFQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM 612
K+ VY S+ + E +F K +A+G + +A LL I Q TM
Sbjct: 688 SKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTM 747
Query: 613 -VEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
V + G+G A P S L + V+ A+L + E + ++++ W+ C G
Sbjct: 748 KVGGNLDSKGYGVATPKGSALGNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 803
Score = 124 (48.7 bits), Expect = 6.0e-22, Sum P(3) = 6.0e-22
Identities = 53/260 (20%), Positives = 116/260 (44%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 141 GAILSLLSYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 198
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V
Sbjct: 199 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 255
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
+ G + + ++ F RW R +E P +A L L +DA +A A
Sbjct: 256 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 315
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-VDGQLQS 247
+ + + A SQ G + +AL ++ +G+TG+ F G+ +
Sbjct: 316 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 374
Query: 248 SAFEIINVN-NGARGVGFWS 266
++ + +G+R G+W+
Sbjct: 375 YTIDVYEMKVSGSRKAGYWN 394
Score = 116 (45.9 bits), Expect = 6.0e-22, Sum P(3) = 6.0e-22
Identities = 42/170 (24%), Positives = 71/170 (41%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G D V TI
Sbjct: 447 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 505
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIG--- 451
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG
Sbjct: 506 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 562
Query: 452 --FVV-------WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMV 485
F+V W LE NE+ R P ++ G S WFS +
Sbjct: 563 VLFLVSRFSPYEWHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGAFM 611
Score = 37 (18.1 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 410 TESGVSMIVPIKDSKKRNAW 429
TE G S++ I ++ +N W
Sbjct: 161 TERGFSVLQAIMEAAVQNNW 180
>UNIPROTKB|P19492 [details] [associations]
symbol:Gria3 "Glutamate receptor 3" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0014069 GO:GO:0060992
GO:GO:0010226 GO:GO:0043198 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0032279 GO:GO:0043195 GO:GO:0032281
GO:GO:0043083 GO:GO:0001919 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
CTD:2892 KO:K05199 OrthoDB:EOG4XKV68 PDB:3LSW PDB:3LSX PDBsum:3LSW
PDBsum:3LSX EMBL:M36420 EMBL:X54656 EMBL:M38062 EMBL:M85036
IPI:IPI00195443 IPI:IPI00231095 PIR:C40170 RefSeq:NP_001106213.1
RefSeq:NP_116785.2 UniGene:Rn.74049 PDB:3DLN PDB:3DP4 PDB:3M3F
PDB:3M3K PDB:3O21 PDB:3P3W PDB:3RT6 PDB:3RT8 PDB:4F1Y PDB:4F22
PDB:4F29 PDB:4F2O PDB:4F2Q PDB:4F31 PDB:4F39 PDB:4F3B PDB:4F3G
PDBsum:3DLN PDBsum:3DP4 PDBsum:3M3F PDBsum:3M3K PDBsum:3O21
PDBsum:3P3W PDBsum:3RT6 PDBsum:3RT8 PDBsum:4F1Y PDBsum:4F22
PDBsum:4F29 PDBsum:4F2O PDBsum:4F2Q PDBsum:4F31 PDBsum:4F39
PDBsum:4F3B PDBsum:4F3G ProteinModelPortal:P19492 SMR:P19492
IntAct:P19492 MINT:MINT-86220 STRING:P19492 PhosphoSite:P19492
PRIDE:P19492 GeneID:29628 KEGG:rno:29628 UCSC:RGD:70958
BindingDB:P19492 ChEMBL:CHEMBL3504 EvolutionaryTrace:P19492
NextBio:609848 ArrayExpress:P19492 Genevestigator:P19492
GermOnline:ENSRNOG00000007682 Uniprot:P19492
Length = 888
Score = 154 (59.3 bits), Expect = 6.0e-22, Sum P(3) = 6.0e-22
Identities = 71/236 (30%), Positives = 108/236 (45%)
Query: 455 WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMVFSQRERVIS--NLA-RFVVIVW 504
W LE NE+ R P ++ G S WFS F Q+ IS +L+ R V VW
Sbjct: 575 WHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVW 631
Query: 505 CFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDE 564
F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G K+ F
Sbjct: 632 WFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRR 687
Query: 565 RKLVVYN---SHEECDE--LFQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM 612
K+ VY S+ + E +F K +A+G + +A LL I Q TM
Sbjct: 688 SKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTM 747
Query: 613 -VEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
V + G+G A P S L + V+ A+L + E + ++++ W+ C G
Sbjct: 748 KVGGNLDSKGYGVATPKGSALGNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 803
Score = 124 (48.7 bits), Expect = 6.0e-22, Sum P(3) = 6.0e-22
Identities = 53/260 (20%), Positives = 116/260 (44%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 141 GAILSLLSYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 198
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V
Sbjct: 199 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 255
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
+ G + + ++ F RW R +E P +A L L +DA +A A
Sbjct: 256 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 315
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-VDGQLQS 247
+ + + A SQ G + +AL ++ +G+TG+ F G+ +
Sbjct: 316 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 374
Query: 248 SAFEIINVN-NGARGVGFWS 266
++ + +G+R G+W+
Sbjct: 375 YTIDVYEMKVSGSRKAGYWN 394
Score = 116 (45.9 bits), Expect = 6.0e-22, Sum P(3) = 6.0e-22
Identities = 42/170 (24%), Positives = 71/170 (41%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G D V TI
Sbjct: 447 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 505
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIG--- 451
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG
Sbjct: 506 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 562
Query: 452 --FVV-------WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMV 485
F+V W LE NE+ R P ++ G S WFS +
Sbjct: 563 VLFLVSRFSPYEWHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGAFM 611
Score = 37 (18.1 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 410 TESGVSMIVPIKDSKKRNAW 429
TE G S++ I ++ +N W
Sbjct: 161 TERGFSVLQAIMEAAVQNNW 180
>UNIPROTKB|F1RU73 [details] [associations]
symbol:LOC100519996 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
OMA:MVQQFLQ EMBL:CU210872 EMBL:CU469331 EMBL:CU856192
Ensembl:ENSSSCT00000013819 Uniprot:F1RU73
Length = 854
Score = 155 (59.6 bits), Expect = 6.4e-22, Sum P(3) = 6.4e-22
Identities = 74/250 (29%), Positives = 116/250 (46%)
Query: 455 WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMVFSQRERVIS--NLA-RFVVIVW 504
W LE NE+ R P ++ G S WFS F Q+ IS +L+ R V VW
Sbjct: 541 WHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVW 597
Query: 505 CFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDE 564
F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G K+ F
Sbjct: 598 WFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRR 653
Query: 565 RKLVVYN---SHEECDE--LFQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM 612
K+ VY S+ + E +F K +A+G + +A LL I Q TM
Sbjct: 654 SKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTM 713
Query: 613 -VEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC--PDAGTV 669
V + G+G A P S L V+ A+L ++E + ++++ W+ C D+G+
Sbjct: 714 KVGGNLDSKGYGVATPKGSALRTPVNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSK 773
Query: 670 VSARSLGLNS 679
+L L++
Sbjct: 774 DKTSALSLSN 783
Score = 122 (48.0 bits), Expect = 6.4e-22, Sum P(3) = 6.4e-22
Identities = 53/260 (20%), Positives = 115/260 (44%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 107 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 164
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V
Sbjct: 165 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 221
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
+ G + + ++ F RW R +E P +A L L +DA +A A
Sbjct: 222 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 281
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-VDGQLQS 247
+ + + A SQ G + +AL ++ +G+TG+ F G+ +
Sbjct: 282 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 340
Query: 248 SAFEIINVN-NGARGVGFWS 266
++ + G+R G+W+
Sbjct: 341 YTIDVYEMKVTGSRKAGYWN 360
Score = 116 (45.9 bits), Expect = 6.4e-22, Sum P(3) = 6.4e-22
Identities = 42/170 (24%), Positives = 71/170 (41%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G D V TI
Sbjct: 413 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 471
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIG--- 451
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG
Sbjct: 472 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 528
Query: 452 --FVV-------WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMV 485
F+V W LE NE+ R P ++ G S WFS +
Sbjct: 529 VLFLVSRFSPYEWHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGAFM 577
Score = 38 (18.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 388 AVVGDTTIVFNRSNYVDFTLPY-TESGVSMIVPIKDSKKRNAW 429
A+ G + + F Y TE G S++ I ++ +N W
Sbjct: 104 ALKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNW 146
>UNIPROTKB|G3V6Z5 [details] [associations]
symbol:Gria3 "Glutamate receptor, ionotropic, AMPA3 (Alpha
3), isoform CRA_b" species:10116 "Rattus norvegicus" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:MVQQFLQ UniGene:Rn.74049 EMBL:CH473991
ProteinModelPortal:G3V6Z5 Ensembl:ENSRNOT00000010367 Uniprot:G3V6Z5
Length = 888
Score = 155 (59.6 bits), Expect = 7.5e-22, Sum P(3) = 7.5e-22
Identities = 74/250 (29%), Positives = 116/250 (46%)
Query: 455 WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMVFSQRERVIS--NLA-RFVVIVW 504
W LE NE+ R P ++ G S WFS F Q+ IS +L+ R V VW
Sbjct: 575 WHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVW 631
Query: 505 CFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDE 564
F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G K+ F
Sbjct: 632 WFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRR 687
Query: 565 RKLVVYN---SHEECDE--LFQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM 612
K+ VY S+ + E +F K +A+G + +A LL I Q TM
Sbjct: 688 SKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTM 747
Query: 613 -VEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC--PDAGTV 669
V + G+G A P S L V+ A+L ++E + ++++ W+ C D+G+
Sbjct: 748 KVGGNLDSKGYGVATPKGSALRTPVNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSK 807
Query: 670 VSARSLGLNS 679
+L L++
Sbjct: 808 DKTSALSLSN 817
Score = 122 (48.0 bits), Expect = 7.5e-22, Sum P(3) = 7.5e-22
Identities = 53/260 (20%), Positives = 116/260 (44%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 141 GAILSLLGYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 198
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V
Sbjct: 199 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 255
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
+ G + + ++ F RW R +E P +A L L +DA +A A
Sbjct: 256 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 315
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-VDGQLQS 247
+ + + A SQ G + +AL ++ +G+TG+ F G+ +
Sbjct: 316 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 374
Query: 248 SAFEIINVN-NGARGVGFWS 266
++ + +G+R G+W+
Sbjct: 375 YTIDVYEMKVSGSRKAGYWN 394
Score = 116 (45.9 bits), Expect = 7.5e-22, Sum P(3) = 7.5e-22
Identities = 42/170 (24%), Positives = 71/170 (41%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G D V TI
Sbjct: 447 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 505
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIG--- 451
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG
Sbjct: 506 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 562
Query: 452 --FVV-------WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMV 485
F+V W LE NE+ R P ++ G S WFS +
Sbjct: 563 VLFLVSRFSPYEWHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGAFM 611
Score = 37 (18.1 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 410 TESGVSMIVPIKDSKKRNAW 429
TE G S++ I ++ +N W
Sbjct: 161 TERGFSVLQAIMEAAVQNNW 180
>UNIPROTKB|E2RHU1 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234 CTD:2892
KO:K05199 OMA:MVQQFLQ EMBL:AAEX03026851 EMBL:AAEX03026852
RefSeq:XP_852016.1 ProteinModelPortal:E2RHU1
Ensembl:ENSCAFT00000029477 GeneID:492110 KEGG:cfa:492110
NextBio:20864762 Uniprot:E2RHU1
Length = 894
Score = 155 (59.6 bits), Expect = 7.7e-22, Sum P(3) = 7.7e-22
Identities = 74/250 (29%), Positives = 116/250 (46%)
Query: 455 WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMVFSQRERVIS--NLA-RFVVIVW 504
W LE NE+ R P ++ G S WFS F Q+ IS +L+ R V VW
Sbjct: 581 WHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVW 637
Query: 505 CFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDE 564
F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G K+ F
Sbjct: 638 WFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRR 693
Query: 565 RKLVVYN---SHEECDE--LFQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM 612
K+ VY S+ + E +F K +A+G + +A LL I Q TM
Sbjct: 694 SKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTM 753
Query: 613 -VEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC--PDAGTV 669
V + G+G A P S L V+ A+L ++E + ++++ W+ C D+G+
Sbjct: 754 KVGGNLDSKGYGVATPKGSALRTPVNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSK 813
Query: 670 VSARSLGLNS 679
+L L++
Sbjct: 814 DKTSALSLSN 823
Score = 122 (48.0 bits), Expect = 7.7e-22, Sum P(3) = 7.7e-22
Identities = 53/260 (20%), Positives = 115/260 (44%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 147 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 204
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V
Sbjct: 205 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 261
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
+ G + + ++ F RW R +E P +A L L +DA +A A
Sbjct: 262 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 321
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-VDGQLQS 247
+ + + A SQ G + +AL ++ +G+TG+ F G+ +
Sbjct: 322 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 380
Query: 248 SAFEIINVN-NGARGVGFWS 266
++ + G+R G+W+
Sbjct: 381 YTIDVYEMKVTGSRKAGYWN 400
Score = 116 (45.9 bits), Expect = 7.7e-22, Sum P(3) = 7.7e-22
Identities = 42/170 (24%), Positives = 71/170 (41%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G D V TI
Sbjct: 453 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 511
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIG--- 451
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG
Sbjct: 512 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 568
Query: 452 --FVV-------WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMV 485
F+V W LE NE+ R P ++ G S WFS +
Sbjct: 569 VLFLVSRFSPYEWHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGAFM 617
Score = 38 (18.4 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 388 AVVGDTTIVFNRSNYVDFTLPY-TESGVSMIVPIKDSKKRNAW 429
A+ G + + F Y TE G S++ I ++ +N W
Sbjct: 144 ALKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNW 186
>UNIPROTKB|P42263 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0007215 "glutamate
receptor signaling pathway" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0060992
GO:GO:0010226 GO:GO:0007268 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0043195
DrugBank:DB00142 GO:GO:0032281 GO:GO:0043083 GO:GO:0001919
Orphanet:777 EMBL:CH471107 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOVERGEN:HBG051839
EMBL:U10302 EMBL:U10301 EMBL:X82068 EMBL:AF166365 EMBL:AF166362
EMBL:AF166363 EMBL:AF166364 EMBL:AF167332 EMBL:AF166366
EMBL:AF166367 EMBL:AF166368 EMBL:AF166369 EMBL:AF166370
EMBL:AF166371 EMBL:AF166372 EMBL:AF166373 EMBL:AF166375
EMBL:AF166374 EMBL:AL356213 EMBL:AL035426 EMBL:AL590139 EMBL:Z83848
EMBL:Z82899 IPI:IPI00219315 IPI:IPI00298700 PIR:S49460 PIR:S50128
PIR:S53696 RefSeq:NP_000819.3 RefSeq:NP_015564.4 UniGene:Hs.377070
ProteinModelPortal:P42263 SMR:P42263 DIP:DIP-46195N STRING:P42263
TCDB:1.A.10.1.4 PhosphoSite:P42263 DMDM:77416864 PaxDb:P42263
PRIDE:P42263 DNASU:2892 Ensembl:ENST00000264357
Ensembl:ENST00000371251 Ensembl:ENST00000371256 GeneID:2892
KEGG:hsa:2892 UCSC:uc004etq.4 UCSC:uc004etr.4 CTD:2892
GeneCards:GC0XP122318 HGNC:HGNC:4573 HPA:CAB007799 MIM:300699
MIM:305915 neXtProt:NX_P42263 PharmGKB:PA28968 InParanoid:P42263
KO:K05199 OMA:MVQQFLQ OrthoDB:EOG4XKV68 BindingDB:P42263
ChEMBL:CHEMBL3595 ChiTaRS:GRIA3 GenomeRNAi:2892 NextBio:11437
ArrayExpress:P42263 Bgee:P42263 CleanEx:HS_GRIA3
Genevestigator:P42263 GermOnline:ENSG00000125675 Uniprot:P42263
Length = 894
Score = 154 (59.3 bits), Expect = 7.8e-22, Sum P(3) = 7.8e-22
Identities = 71/236 (30%), Positives = 108/236 (45%)
Query: 455 WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMVFSQRERVIS--NLA-RFVVIVW 504
W LE NE+ R P ++ G S WFS F Q+ IS +L+ R V VW
Sbjct: 581 WHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVW 637
Query: 505 CFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDE 564
F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G K+ F
Sbjct: 638 WFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRR 693
Query: 565 RKLVVYN---SHEECDE--LFQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM 612
K+ VY S+ + E +F K +A+G + +A LL I Q TM
Sbjct: 694 SKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTM 753
Query: 613 -VEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
V + G+G A P S L + V+ A+L + E + ++++ W+ C G
Sbjct: 754 KVGGNLDSKGYGVATPKGSALRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 809
Score = 123 (48.4 bits), Expect = 7.8e-22, Sum P(3) = 7.8e-22
Identities = 53/260 (20%), Positives = 116/260 (44%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 147 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 204
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V
Sbjct: 205 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 261
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
+ G + + ++ F RW R +E P +A L L +DA +A A
Sbjct: 262 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 321
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-VDGQLQS 247
+ + + A SQ G + +AL ++ +G+TG+ F G+ +
Sbjct: 322 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 380
Query: 248 SAFEIINVN-NGARGVGFWS 266
++ + +G+R G+W+
Sbjct: 381 YTIDVYEMKVSGSRKAGYWN 400
Score = 116 (45.9 bits), Expect = 7.8e-22, Sum P(3) = 7.8e-22
Identities = 42/170 (24%), Positives = 71/170 (41%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G D V TI
Sbjct: 453 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 511
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIG--- 451
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG
Sbjct: 512 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 568
Query: 452 --FVV-------WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMV 485
F+V W LE NE+ R P ++ G S WFS +
Sbjct: 569 VLFLVSRFSPYEWHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGAFM 617
Score = 38 (18.4 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 388 AVVGDTTIVFNRSNYVDFTLPY-TESGVSMIVPIKDSKKRNAW 429
A+ G + + F Y TE G S++ I ++ +N W
Sbjct: 144 ALKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNW 186
>UNIPROTKB|G3V8Y9 [details] [associations]
symbol:Gria3 "Glutamate receptor 3" species:10116 "Rattus
norvegicus" [GO:0004971 "alpha-amino-3-hydroxy-5-methyl-4-isoxazole
propionate selective glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 UniGene:Rn.74049 EMBL:CH473991
ProteinModelPortal:G3V8Y9 Ensembl:ENSRNOT00000029031 Uniprot:G3V8Y9
Length = 888
Score = 154 (59.3 bits), Expect = 9.7e-22, Sum P(3) = 9.7e-22
Identities = 71/236 (30%), Positives = 108/236 (45%)
Query: 455 WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMVFSQRERVIS--NLA-RFVVIVW 504
W LE NE+ R P ++ G S WFS F Q+ IS +L+ R V VW
Sbjct: 575 WHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVW 631
Query: 505 CFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDE 564
F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G K+ F
Sbjct: 632 WFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRR 687
Query: 565 RKLVVYN---SHEECDE--LFQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM 612
K+ VY S+ + E +F K +A+G + +A LL I Q TM
Sbjct: 688 SKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTM 747
Query: 613 -VEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
V + G+G A P S L + V+ A+L + E + ++++ W+ C G
Sbjct: 748 KVGGNLDSKGYGVATPKGSALRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 803
Score = 122 (48.0 bits), Expect = 9.7e-22, Sum P(3) = 9.7e-22
Identities = 53/260 (20%), Positives = 116/260 (44%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 141 GAILSLLGYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 198
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V
Sbjct: 199 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 255
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
+ G + + ++ F RW R +E P +A L L +DA +A A
Sbjct: 256 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 315
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-VDGQLQS 247
+ + + A SQ G + +AL ++ +G+TG+ F G+ +
Sbjct: 316 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 374
Query: 248 SAFEIINVN-NGARGVGFWS 266
++ + +G+R G+W+
Sbjct: 375 YTIDVYEMKVSGSRKAGYWN 394
Score = 116 (45.9 bits), Expect = 9.7e-22, Sum P(3) = 9.7e-22
Identities = 42/170 (24%), Positives = 71/170 (41%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G D V TI
Sbjct: 447 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 505
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIG--- 451
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG
Sbjct: 506 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 562
Query: 452 --FVV-------WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMV 485
F+V W LE NE+ R P ++ G S WFS +
Sbjct: 563 VLFLVSRFSPYEWHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGAFM 611
Score = 37 (18.1 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 410 TESGVSMIVPIKDSKKRNAW 429
TE G S++ I ++ +N W
Sbjct: 161 TERGFSVLQAIMEAAVQNNW 180
>UNIPROTKB|F1P0S5 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0004971 GO:GO:0005234 OMA:MVQQFLQ EMBL:AADN02013607
EMBL:AADN02013608 IPI:IPI00883216 Ensembl:ENSGALT00000013865
ArrayExpress:F1P0S5 Uniprot:F1P0S5
Length = 804
Score = 152 (58.6 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 67/230 (29%), Positives = 107/230 (46%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 510 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 567
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY S+ + E +
Sbjct: 568 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSV 623
Query: 580 FQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSP 631
F K +A+G + +A LL I Q TM V + G+G A P S
Sbjct: 624 FTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSA 683
Query: 632 LVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC--PDAGTVVSARSLGLNS 679
L V+ A+L ++E + ++++ W+ C D+G+ +L L++
Sbjct: 684 LRTPVNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSN 733
Score = 123 (48.4 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 53/260 (20%), Positives = 117/260 (45%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV S + + +
Sbjct: 57 GAILSLLTYYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGS-IKDVQEFRR 114
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
+ ++ Q + +++ + I E+ +G ++G +++ + G T+++ LE V
Sbjct: 115 IIEEMDRRQEKRYLIDCEVDRINTILEQVVILGKHSRGYHYMLANLGFTDIV--LE-RVM 171
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
V G + + ++ F RW R +E P ++ L L +DA +A A
Sbjct: 172 HGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKNSPLKYTSALTHDAVLVIAEAF 231
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-VDGQLQS 247
+ + + A SQ G + +AL ++ +G+TG+ F G+ +
Sbjct: 232 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 290
Query: 248 SAFEIINVN-NGARGVGFWS 266
++ + +G+R G+W+
Sbjct: 291 YTIDVYEMKASGSRKAGYWN 310
Score = 115 (45.5 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 29/120 (24%), Positives = 53/120 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G D V TI
Sbjct: 363 GYCVDLASEIAKHVGIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 421
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGFVV 454
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 422 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 478
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 410 TESGVSMIVPIKDSKKRNAW 429
TE G S++ I ++ +N W
Sbjct: 77 TERGFSILQAIMEAAVQNNW 96
>MGI|MGI:95810 [details] [associations]
symbol:Gria3 "glutamate receptor, ionotropic, AMPA3 (alpha 3)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0030425
"dendrite" evidence=ISO] [GO:0032279 "asymmetric synapse"
evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043083
"synaptic cleft" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043198 "dendritic shaft" evidence=ISO] [GO:0043204
"perikaryon" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95810 GO:GO:0014069 GO:GO:0060992 GO:GO:0010226
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0032279 GO:GO:0043195 GO:GO:0032281 GO:GO:0043083
GO:GO:0001919 InterPro:IPR001828 EMBL:CH466570 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
HOGENOM:HOG000234372 HOVERGEN:HBG051839 CTD:2892 KO:K05199
OrthoDB:EOG4XKV68 EMBL:AB022342 EMBL:AB079072 EMBL:AF483494
EMBL:AF483495 EMBL:AK220530 EMBL:AL672290 EMBL:AL672232
EMBL:BC129855 IPI:IPI00131472 RefSeq:NP_058582.3 UniGene:Mm.327681
PDB:3LSW PDB:3LSX PDBsum:3LSW PDBsum:3LSX ProteinModelPortal:Q9Z2W9
SMR:Q9Z2W9 IntAct:Q9Z2W9 STRING:Q9Z2W9 PhosphoSite:Q9Z2W9
PaxDb:Q9Z2W9 PRIDE:Q9Z2W9 Ensembl:ENSMUST00000076349 GeneID:53623
KEGG:mmu:53623 UCSC:uc009tam.2 BindingDB:Q9Z2W9 ChEMBL:CHEMBL3624
EvolutionaryTrace:Q9Z2W9 NextBio:310361 Bgee:Q9Z2W9
CleanEx:MM_GRIA3 Genevestigator:Q9Z2W9
GermOnline:ENSMUSG00000001986 Uniprot:Q9Z2W9
Length = 888
Score = 155 (59.6 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 74/250 (29%), Positives = 116/250 (46%)
Query: 455 WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMVFSQRERVIS--NLA-RFVVIVW 504
W LE NE+ R P ++ G S WFS F Q+ IS +L+ R V VW
Sbjct: 575 WHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVW 631
Query: 505 CFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDE 564
F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G K+ F
Sbjct: 632 WFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRR 687
Query: 565 RKLVVYN---SHEECDE--LFQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM 612
K+ VY S+ + E +F K +A+G + +A LL I Q TM
Sbjct: 688 SKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTM 747
Query: 613 -VEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC--PDAGTV 669
V + G+G A P S L V+ A+L ++E + ++++ W+ C D+G+
Sbjct: 748 KVGGNLDSKGYGVATPKGSALRTPVNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSK 807
Query: 670 VSARSLGLNS 679
+L L++
Sbjct: 808 DKTSALSLSN 817
Score = 120 (47.3 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 52/260 (20%), Positives = 116/260 (44%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 141 GAILSLLGYYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDIQEFRR 198
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
+ ++ Q + +++ + I E+ +G ++G +++ + G T+++ LE V
Sbjct: 199 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIV--LE-RVM 255
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
+ G + + ++ F RW R +E P +A L L +DA +A A
Sbjct: 256 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 315
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-VDGQLQS 247
+ + + A SQ G + +AL ++ +G+TG+ F G+ +
Sbjct: 316 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 374
Query: 248 SAFEIINVN-NGARGVGFWS 266
++ + +G+R G+W+
Sbjct: 375 YTIDVYEMKVSGSRKAGYWN 394
Score = 116 (45.9 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 42/170 (24%), Positives = 71/170 (41%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G D V TI
Sbjct: 447 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 505
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIG--- 451
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG
Sbjct: 506 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 562
Query: 452 --FVV-------WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMV 485
F+V W LE NE+ R P ++ G S WFS +
Sbjct: 563 VLFLVSRFSPYEWHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGAFM 611
Score = 37 (18.1 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 410 TESGVSMIVPIKDSKKRNAW 429
TE G S++ I ++ +N W
Sbjct: 161 TERGFSILQAIMEAAVQNNW 180
>MGI|MGI:95813 [details] [associations]
symbol:Grid2 "glutamate receptor, ionotropic, delta 2"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=IDA] [GO:0010975 "regulation
of neuron projection development" evidence=IMP] [GO:0014069
"postsynaptic density" evidence=ISO] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=ISO;IPI] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IDA] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IMP] [GO:0043197 "dendritic
spine" evidence=IDA] [GO:0043523 "regulation of neuron apoptotic
process" evidence=IGI;IMP] [GO:0045202 "synapse" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=ISO;IDA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IMP] [GO:0060134 "prepulse inhibition" evidence=IMP]
[GO:0097110 "scaffold protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95813
GO:GO:0014069 GO:GO:0034613 GO:GO:0030054 GO:GO:0045211
GO:GO:0043197 GO:GO:0035235 GO:GO:0060079 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043523 InterPro:IPR001828
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 eggNOG:NOG276334 HOGENOM:HOG000264260
HOVERGEN:HBG051840 CTD:2895 KO:K05207 OrthoDB:EOG4SBDX4 OMA:CSFYTVG
EMBL:D13266 EMBL:BC139823 IPI:IPI00123534 PIR:PN0156
RefSeq:NP_032193.1 UniGene:Mm.439651 UniGene:Mm.447390
ProteinModelPortal:Q61625 SMR:Q61625 IntAct:Q61625 MINT:MINT-126960
STRING:Q61625 TCDB:1.A.10.1.8 PhosphoSite:Q61625 PaxDb:Q61625
PRIDE:Q61625 Ensembl:ENSMUST00000095852 GeneID:14804 KEGG:mmu:14804
UCSC:uc009cdz.1 InParanoid:A4QPG1 BindingDB:Q61625 ChiTaRS:GRID2
NextBio:286973 Bgee:Q61625 CleanEx:MM_GRID2 Genevestigator:Q61625
GermOnline:ENSMUSG00000071424 Uniprot:Q61625
Length = 1007
Score = 233 (87.1 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 125/489 (25%), Positives = 201/489 (41%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARGVGFWSPEKGXXXXX 275
Q G +L+ + GLTGD F + G + FEI+ N G +G + G
Sbjct: 364 QGGRSMLETIKKGGVNGLTGDLEFGENGGNPNVHFEILGTNYGEE-LGRGVRKLGCW--- 419
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P+ S +D K E LRV V V + FV V+ + +
Sbjct: 420 ----------NPVTGLNGSLTDKK-LENNMRGVVLRV-VTVLE--EPFVMVSENVLGKPK 465
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
G+SIDV A+ L + P Y P G++N L+ ++ D +
Sbjct: 466 KYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQ--EDGTWNGLVGELVFKRADIGISA 523
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGF 452
TI +R N VDFT Y + V +++ + K + + L P LW + +G
Sbjct: 524 LTITPDRENVVDFTTRYMDYSVGVLLR-RAEKTVDMFACLAPFDLSLWACIAGTVLLVGL 582
Query: 453 VVWVLEHRVNEDFRGPARHQVGT--------SFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+V++L ++ P R Q+G+ S WF + + V E + LA R ++
Sbjct: 583 LVYLL------NWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGA 636
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQKGSFVLGILKQLGF 562
W LI+I SYTA+L + LT+ +++ +I + L K+ D G S V ++ G
Sbjct: 637 WWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYGTVLDSAVYQHVRMKGL 696
Query: 563 D--ER--------KLVVYNSHEECDEL-FQKGSAN---GGIAAAFDEIPYAKLLIGQ-HC 607
+ ER +++ ++ E + L Q G G A +D + I C
Sbjct: 697 NPFERDSMYSQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDPDC 756
Query: 608 SKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
S YT V T G+G A SP S+ IL + + M ++ W+ K+ C D
Sbjct: 757 SFYT-VGNTVADRGYGIALQHGSPYRDVFSQRILELQQSGDMDILKHKWWPKNGQC-DLY 814
Query: 668 TVVSARSLG 676
+ V A+ G
Sbjct: 815 SSVDAKQKG 823
Score = 107 (42.7 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 67/278 (24%), Positives = 114/278 (41%)
Query: 12 ITAIIKAFGWREAVPIYVDNQYG----EELIPSLTD-----ALQAIDTRVPYRSVISPLA 62
I ++ + W++ + I+ D++Y +E + ++ ALQ ++ + +I+ L
Sbjct: 156 ILRVVTEYAWQKFI-IFYDSEYDIRGIQEFLDKVSQQGMDVALQKVENNI--NKMITTLF 212
Query: 63 TDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRT 122
+IE EL + + R IL M P+ + E L+ C WI+ + N +
Sbjct: 213 DTMRIE-ELNR-YRDTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDV 270
Query: 123 LEPSVTDSMQGVIGVRPY--VPKTKALENFRVRWK-RKFLQENPSLFDAELNIFGLLAYD 179
E V S+ + +R VP+ + FR + L + F + I L YD
Sbjct: 271 QE-LVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSSLCDPKDPFAQNMEISNLYIYD 329
Query: 180 ATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYI 239
LA A K ++S + + + Q G +L+ + GLTGD
Sbjct: 330 TVLLLANAFHKKLEDRKWHSMASLSCIRKNSKPW---QGGRSMLETIKKGGVNGLTGDLE 386
Query: 240 FVD-GQLQSSAFEIINVNNG---ARGV---GFWSPEKG 270
F + G + FEI+ N G RGV G W+P G
Sbjct: 387 FGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTG 424
>RGD|68368 [details] [associations]
symbol:Grid2 "glutamate receptor, ionotropic, delta 2"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008328 "ionotropic glutamate receptor complex"
evidence=IEA;ISO] [GO:0010975 "regulation of neuron projection
development" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA;ISO;IPI]
[GO:0030288 "outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA;ISO]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA;ISO]
[GO:0043197 "dendritic spine" evidence=IEA;ISO] [GO:0043523
"regulation of neuron apoptotic process" evidence=IEA;ISO]
[GO:0045202 "synapse" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA;ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA;ISO]
[GO:0060134 "prepulse inhibition" evidence=IEA;ISO] [GO:0097110
"scaffold protein binding" evidence=IEA;ISO] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918
Pfam:PF01094 RGD:68368 GO:GO:0014069 GO:GO:0034613 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0060079 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043523 InterPro:IPR001828
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970 eggNOG:NOG276334
HOGENOM:HOG000264260 HOVERGEN:HBG051840 CTD:2895 KO:K05207
OrthoDB:EOG4SBDX4 OMA:CSFYTVG EMBL:Z17239 EMBL:U08256
IPI:IPI00206854 PIR:S28858 RefSeq:NP_077355.1 RefSeq:XP_003749821.1
UniGene:Rn.10046 PDB:2V3T PDB:2V3U PDBsum:2V3T PDBsum:2V3U
ProteinModelPortal:Q63226 SMR:Q63226 DIP:DIP-40709N MINT:MINT-350054
STRING:Q63226 PhosphoSite:Q63226 Ensembl:ENSRNOT00000008304
GeneID:79220 KEGG:rno:79220 UCSC:RGD:68368 InParanoid:Q63226
EvolutionaryTrace:Q63226 NextBio:614640 ArrayExpress:Q63226
Genevestigator:Q63226 GermOnline:ENSRNOG00000006174 Uniprot:Q63226
Length = 1007
Score = 233 (87.1 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 125/489 (25%), Positives = 201/489 (41%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARGVGFWSPEKGXXXXX 275
Q G +L+ + GLTGD F + G + FEI+ N G +G + G
Sbjct: 364 QGGRSMLETIKKGGVNGLTGDLEFGENGGNPNVHFEILGTNYGEE-LGRGVRKLGCW--- 419
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P+ S +D K E LRV V V + FV V+ + +
Sbjct: 420 ----------NPVTGLNGSLTDKK-LENNMRGVVLRV-VTVLE--EPFVMVSENVLGKPK 465
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
G+SIDV A+ L + P Y P G++N L+ ++ D +
Sbjct: 466 KYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQ--EDGTWNGLVGELVFKRADIGISA 523
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGF 452
TI +R N VDFT Y + V +++ + K + + L P LW + +G
Sbjct: 524 LTITPDRENVVDFTTRYMDYSVGVLLR-RAEKTVDMFACLAPFDLSLWACIAGTVLLVGL 582
Query: 453 VVWVLEHRVNEDFRGPARHQVGT--------SFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+V++L ++ P R Q+G+ S WF + + V E + LA R ++
Sbjct: 583 LVYLL------NWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGA 636
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQKGSFVLGILKQLGF 562
W LI+I SYTA+L + LT+ +++ +I + L K+ D G S V ++ G
Sbjct: 637 WWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYGTVLDSAVYQHVRMKGL 696
Query: 563 D--ER--------KLVVYNSHEECDEL-FQKGSAN---GGIAAAFDEIPYAKLLIGQ-HC 607
+ ER +++ ++ E + L Q G G A +D + I C
Sbjct: 697 NPFERDSMYSQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDPDC 756
Query: 608 SKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
S YT V T G+G A SP S+ IL + + M ++ W+ K+ C D
Sbjct: 757 SFYT-VGNTVADRGYGIALQHGSPYRDVFSQRILELQQSGDMDILKHKWWPKNGQC-DLY 814
Query: 668 TVVSARSLG 676
+ V A+ G
Sbjct: 815 SSVDAKQKG 823
Score = 107 (42.7 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 67/278 (24%), Positives = 114/278 (41%)
Query: 12 ITAIIKAFGWREAVPIYVDNQYG----EELIPSLTD-----ALQAIDTRVPYRSVISPLA 62
I ++ + W++ + I+ D++Y +E + ++ ALQ ++ + +I+ L
Sbjct: 156 ILRVVTEYAWQKFI-IFYDSEYDIRGIQEFLDKVSQQGMDVALQKVENNI--NKMITTLF 212
Query: 63 TDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRT 122
+IE EL + + R IL M P+ + E L+ C WI+ + N +
Sbjct: 213 DTMRIE-ELNR-YRDTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDV 270
Query: 123 LEPSVTDSMQGVIGVRPY--VPKTKALENFRVRWK-RKFLQENPSLFDAELNIFGLLAYD 179
E V S+ + +R VP+ + FR + L + F + I L YD
Sbjct: 271 QE-LVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYD 329
Query: 180 ATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYI 239
LA A K ++S + + + Q G +L+ + GLTGD
Sbjct: 330 TVLLLANAFHKKLEDRKWHSMASLSCIRKNSKPW---QGGRSMLETIKKGGVNGLTGDLE 386
Query: 240 FVD-GQLQSSAFEIINVNNG---ARGV---GFWSPEKG 270
F + G + FEI+ N G RGV G W+P G
Sbjct: 387 FGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTG 424
>UNIPROTKB|Q63226 [details] [associations]
symbol:Grid2 "Glutamate receptor ionotropic, delta-2"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:68368 GO:GO:0014069
GO:GO:0034613 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0060079 GO:GO:0060134 GO:GO:0035249 GO:GO:0030288
GO:GO:0043523 InterPro:IPR001828 GO:GO:0008328 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG276334 HOGENOM:HOG000264260
HOVERGEN:HBG051840 CTD:2895 KO:K05207 OrthoDB:EOG4SBDX4 OMA:CSFYTVG
EMBL:Z17239 EMBL:U08256 IPI:IPI00206854 PIR:S28858
RefSeq:NP_077355.1 RefSeq:XP_003749821.1 UniGene:Rn.10046 PDB:2V3T
PDB:2V3U PDBsum:2V3T PDBsum:2V3U ProteinModelPortal:Q63226
SMR:Q63226 DIP:DIP-40709N MINT:MINT-350054 STRING:Q63226
PhosphoSite:Q63226 Ensembl:ENSRNOT00000008304 GeneID:79220
KEGG:rno:79220 UCSC:RGD:68368 InParanoid:Q63226
EvolutionaryTrace:Q63226 NextBio:614640 ArrayExpress:Q63226
Genevestigator:Q63226 GermOnline:ENSRNOG00000006174 Uniprot:Q63226
Length = 1007
Score = 233 (87.1 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 125/489 (25%), Positives = 201/489 (41%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARGVGFWSPEKGXXXXX 275
Q G +L+ + GLTGD F + G + FEI+ N G +G + G
Sbjct: 364 QGGRSMLETIKKGGVNGLTGDLEFGENGGNPNVHFEILGTNYGEE-LGRGVRKLGCW--- 419
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P+ S +D K E LRV V V + FV V+ + +
Sbjct: 420 ----------NPVTGLNGSLTDKK-LENNMRGVVLRV-VTVLE--EPFVMVSENVLGKPK 465
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
G+SIDV A+ L + P Y P G++N L+ ++ D +
Sbjct: 466 KYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQ--EDGTWNGLVGELVFKRADIGISA 523
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGF 452
TI +R N VDFT Y + V +++ + K + + L P LW + +G
Sbjct: 524 LTITPDRENVVDFTTRYMDYSVGVLLR-RAEKTVDMFACLAPFDLSLWACIAGTVLLVGL 582
Query: 453 VVWVLEHRVNEDFRGPARHQVGT--------SFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+V++L ++ P R Q+G+ S WF + + V E + LA R ++
Sbjct: 583 LVYLL------NWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGA 636
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQKGSFVLGILKQLGF 562
W LI+I SYTA+L + LT+ +++ +I + L K+ D G S V ++ G
Sbjct: 637 WWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYGTVLDSAVYQHVRMKGL 696
Query: 563 D--ER--------KLVVYNSHEECDEL-FQKGSAN---GGIAAAFDEIPYAKLLIGQ-HC 607
+ ER +++ ++ E + L Q G G A +D + I C
Sbjct: 697 NPFERDSMYSQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDPDC 756
Query: 608 SKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
S YT V T G+G A SP S+ IL + + M ++ W+ K+ C D
Sbjct: 757 SFYT-VGNTVADRGYGIALQHGSPYRDVFSQRILELQQSGDMDILKHKWWPKNGQC-DLY 814
Query: 668 TVVSARSLG 676
+ V A+ G
Sbjct: 815 SSVDAKQKG 823
Score = 107 (42.7 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 67/278 (24%), Positives = 114/278 (41%)
Query: 12 ITAIIKAFGWREAVPIYVDNQYG----EELIPSLTD-----ALQAIDTRVPYRSVISPLA 62
I ++ + W++ + I+ D++Y +E + ++ ALQ ++ + +I+ L
Sbjct: 156 ILRVVTEYAWQKFI-IFYDSEYDIRGIQEFLDKVSQQGMDVALQKVENNI--NKMITTLF 212
Query: 63 TDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRT 122
+IE EL + + R IL M P+ + E L+ C WI+ + N +
Sbjct: 213 DTMRIE-ELNR-YRDTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDV 270
Query: 123 LEPSVTDSMQGVIGVRPY--VPKTKALENFRVRWK-RKFLQENPSLFDAELNIFGLLAYD 179
E V S+ + +R VP+ + FR + L + F + I L YD
Sbjct: 271 QE-LVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYD 329
Query: 180 ATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYI 239
LA A K ++S + + + Q G +L+ + GLTGD
Sbjct: 330 TVLLLANAFHKKLEDRKWHSMASLSCIRKNSKPW---QGGRSMLETIKKGGVNGLTGDLE 386
Query: 240 FVD-GQLQSSAFEIINVNNG---ARGV---GFWSPEKG 270
F + G + FEI+ N G RGV G W+P G
Sbjct: 387 FGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTG 424
>UNIPROTKB|Q38PU6 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9541 "Macaca
fascicularis" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GO:GO:0004971 GO:GO:0005234 HOVERGEN:HBG051839 HSSP:P19491
EMBL:DQ159931 ProteinModelPortal:Q38PU6 SMR:Q38PU6 PRIDE:Q38PU6
Uniprot:Q38PU6
Length = 894
Score = 153 (58.9 bits), Expect = 3.3e-21, Sum P(3) = 3.3e-21
Identities = 71/236 (30%), Positives = 108/236 (45%)
Query: 455 WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMVFSQRERVIS--NLA-RFVVIVW 504
W LE NE+ R P ++ G S WFS F Q+ IS +L+ R V VW
Sbjct: 581 WHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVW 637
Query: 505 CFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDE 564
F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G K+ F
Sbjct: 638 WFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRR 693
Query: 565 RKLVVYN---SHEECDE--LFQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM 612
K+ VY S+ + E +F K +A+G + +A LL I Q TM
Sbjct: 694 SKIAVYEKMWSYMKSAEPSVFTKTTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTM 753
Query: 613 -VEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
V + G+G A P S L + V+ A+L + E + ++++ W+ C G
Sbjct: 754 KVGGNLDSKGYGVATPKGSALGNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGTGG 809
Score = 123 (48.4 bits), Expect = 3.3e-21, Sum P(3) = 3.3e-21
Identities = 53/260 (20%), Positives = 116/260 (44%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 147 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 204
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V
Sbjct: 205 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 261
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
+ G + + ++ F RW R +E P +A L L +DA +A A
Sbjct: 262 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 321
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-VDGQLQS 247
+ + + A SQ G + +AL ++ +G+TG+ F G+ +
Sbjct: 322 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 380
Query: 248 SAFEIINVN-NGARGVGFWS 266
++ + +G+R G+W+
Sbjct: 381 YTIDVYEMKVSGSRKAGYWN 400
Score = 111 (44.1 bits), Expect = 3.3e-21, Sum P(3) = 3.3e-21
Identities = 42/170 (24%), Positives = 70/170 (41%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G D V TI
Sbjct: 453 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 511
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIG--- 451
R +DF+ P+ G+S+++ K + FL PL +++W+ C F IG
Sbjct: 512 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFASIGVSV 568
Query: 452 --FVV-------WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMV 485
F+V W LE NE+ R P ++ G S WFS +
Sbjct: 569 VLFLVSRFSPYEWHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGAFM 617
Score = 38 (18.4 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 388 AVVGDTTIVFNRSNYVDFTLPY-TESGVSMIVPIKDSKKRNAW 429
A+ G + + F Y TE G S++ I ++ +N W
Sbjct: 144 ALKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNW 186
>ZFIN|ZDB-GENE-030616-53 [details] [associations]
symbol:gria3b "glutamate receptor, ionotrophic, AMPA
3b" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030616-53 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234372 HOVERGEN:HBG051839 KO:K05199 OMA:MVQQFLQ
OrthoDB:EOG4XKV68 EMBL:AL732632 EMBL:BX511226 EMBL:BX539334
EMBL:AF525746 IPI:IPI00510089 RefSeq:NP_938174.1 UniGene:Dr.14975
SMR:Q71E60 Ensembl:ENSDART00000043180 GeneID:368416 KEGG:dre:368416
CTD:368416 InParanoid:Q71E60 NextBio:20812912 Uniprot:Q71E60
Length = 883
Score = 193 (73.0 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 72/256 (28%), Positives = 115/256 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + S+N ++ ++ G D V TI
Sbjct: 443 GYCVDLASEIAKHVGIKYRLSIVMDGKYGARDPETK-SWNGMVGELVYGRADIAVAPLTI 501
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIG--- 451
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG
Sbjct: 502 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 558
Query: 452 --FVV-------WVLEH--RVNEDFRGP-ARHQVG--TSFWFSFSTMVFSQRERVIS--N 495
F+V W L+ V + P + G S WFS F Q+ IS +
Sbjct: 559 VLFLVSRFSPYEWQLDETDEVKDPQTPPDPPNDFGIFNSLWFSLGA--FMQQGCDISPRS 616
Query: 496 LA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVL 554
L+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+
Sbjct: 617 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDS 673
Query: 555 GILKQLGFDERKLVVY 570
G K+ F K+ VY
Sbjct: 674 GSTKEF-FRRSKIAVY 688
Score = 144 (55.7 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 62/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 597 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 654
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ VY S+ + E +F K + +G
Sbjct: 655 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFAKTTPDG 710
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ +A LL I Q TM V + G+G A P S L + V+ A
Sbjct: 711 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAVNLA 770
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 771 VLKLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 142 (55.0 bits), Expect = 7.4e-21, Sum P(2) = 7.4e-21
Identities = 58/261 (22%), Positives = 118/261 (45%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQ-IE 68
GA+ +++ + W + V +Y D G ++ ++ +A A + +V RSV S TD Q
Sbjct: 137 GAVLSLLSHYKWDKFVYLY-DTDRGFSILQAIMEAAVANNWQVTARSVGS--ITDPQEFR 193
Query: 69 KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSV 127
+ + ++ Q + +++ + I E+ +G ++G +I+ + G TN+ +L+ V
Sbjct: 194 RIIEEMDRRQEKRYLIDCEVDRINVILEQVVTLGKNSRGYHYIIANLGFTNI--SLD-KV 250
Query: 128 TDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVA 187
+ G + P+ ++ F RW R +E P + L L+YDA +A A
Sbjct: 251 FLGGANISGFQIINPENLVVQQFLQRWDRLDEREFPEAKNTPLKYTSALSYDAILVIAEA 310
Query: 188 VEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQ 246
+ + + A SQ G + +AL ++ +G+TG+ F G+
Sbjct: 311 FRYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDSFGRRT 369
Query: 247 SSAFEIINVNNGA-RGVGFWS 266
+ ++ + G R +G+W+
Sbjct: 370 NYTIDVYEMKTGGPRKIGYWN 390
>UNIPROTKB|F1NAD5 [details] [associations]
symbol:GRID2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0008328 "ionotropic glutamate receptor complex"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0043197 "dendritic spine" evidence=IEA] [GO:0043523 "regulation
of neuron apoptotic process" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0097110
"scaffold protein binding" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0034613 GO:GO:0030054
GO:GO:0045211 GO:GO:0043197 GO:GO:0035235 GO:GO:0030288
GO:GO:0043523 InterPro:IPR001828 GO:GO:0008328 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:CSFYTVG
EMBL:AADN02016072 EMBL:AADN02016073 EMBL:AADN02016074
EMBL:AADN02016075 EMBL:AADN02016076 EMBL:AADN02016077
EMBL:AADN02016078 EMBL:AADN02016079 IPI:IPI00591618
Ensembl:ENSGALT00000016932 Uniprot:F1NAD5
Length = 908
Score = 231 (86.4 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 126/490 (25%), Positives = 202/490 (41%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARGVGFWSPEKGXXXXX 275
Q G +L+ + GLTG+ F + G + FEI+ N G +G + G
Sbjct: 265 QGGRSMLETIKKGGVNGLTGELEFAENGGNPNVHFEILGTNYG-EDLGRGIRKLGCW--- 320
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
PI S +D K E LRV V V + FV V+ + +
Sbjct: 321 ----------NPITGLNGSLTDRK-LENNMRGVVLRV-VTVLE--EPFVMVSENVLGKPK 366
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
G+SIDV +A+ L + P Y P GS+N LI ++ D +
Sbjct: 367 KYQGFSIDVLEALANYLGFKYEIYVAPDHKYGSPQ--DDGSWNGLIGELVFKRADIGISA 424
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGF 452
TI +R N VDFT Y + V +++ K K + + L P LW + +G
Sbjct: 425 LTITPDRENVVDFTTRYMDYSVGVLLR-KAEKTVDMFACLAPFDLSLWACIAGTVLLVGL 483
Query: 453 VVWVLEHRVNEDFRGPARHQVGT--------SFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+V++L ++ P R Q+G+ S WF + + V E + LA R ++
Sbjct: 484 LVYLL------NWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRLMMGA 537
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQKGSFVLGILKQLGF 562
W LI+I SYTA+L + LT+ +++ +I + L ++ D G S V ++ G
Sbjct: 538 WWLFALIVISSYTANLAAFLTITRIENSIQSLQDLSRQTDIPYGTVLDSAVYEHVRVKGM 597
Query: 563 D--ER--------KLVVYNSHEECDEL-----FQKGSANGGIAAAFDEIPYAKLLIGQ-H 606
+ ER +++ ++ E + L QK +G A +D + I
Sbjct: 598 NPFERDSMYSQMWRMINRSNGSENNVLESTAGIQKVK-HGNYAFVWDAAVLEYVAINDGD 656
Query: 607 CSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDA 666
CS YT V T G+G A SP S+ IL + + M ++ W+ K+ C D
Sbjct: 657 CSFYT-VGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQC-DF 714
Query: 667 GTVVSARSLG 676
+ V + G
Sbjct: 715 YSSVDTKQKG 724
Score = 101 (40.6 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 66/278 (23%), Positives = 112/278 (40%)
Query: 12 ITAIIKAFGWREAVPIYVDNQYG----EELIPSLTD-----ALQAIDTRVPYRSVISPLA 62
I +I + W++ + I+ DN Y +E + ++ ALQ ++ + +I+ L
Sbjct: 57 ILRVITEYAWQKFI-IFYDNDYDIRGIQEFLDKVSQQGMDVALQKVENNI--NKMITGLF 113
Query: 63 TDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRT 122
+IE EL + + R IL M P + E L+ C WI+ + + L
Sbjct: 114 ATMRIE-ELNR-YRDTLRRAILVMNPLTAKSFLTEVVETNLVAFDCHWIIINEEISDLDV 171
Query: 123 LEPSVTDSMQGVIGVRPY--VPKTKALENFRVRWK-RKFLQENPSLFDAELNIFGLLAYD 179
E V S+ + +R VP+ + FR + L + F + I L YD
Sbjct: 172 QE-LVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSSLCDPKDPFSQSMEISNLYIYD 230
Query: 180 ATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYI 239
LA A K +++ + + + Q G +L+ + GLTG+
Sbjct: 231 TVLLLANAFHKKLEDRKWHSMASLTCIRKNSKPW---QGGRSMLETIKKGGVNGLTGELE 287
Query: 240 FVD-GQLQSSAFEIINVNNG---ARGV---GFWSPEKG 270
F + G + FEI+ N G RG+ G W+P G
Sbjct: 288 FAENGGNPNVHFEILGTNYGEDLGRGIRKLGCWNPITG 325
>UNIPROTKB|F1P2J9 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00586084
ProteinModelPortal:F1P2J9 Ensembl:ENSGALT00000040369 Uniprot:F1P2J9
Length = 880
Score = 225 (84.3 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 91/374 (24%), Positives = 164/374 (43%)
Query: 313 GVPVKKGFSDFVKVTIDPK-TQETSVVGYSIDVF--KAVIEELPYAV--AYD--FVPYAQ 365
G PVKK F TI + T G+ ID+ A + Y V D F +
Sbjct: 343 GDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQER 402
Query: 366 PDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKK 425
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 403 VNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPR 461
Query: 426 RNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFW 478
F+QP LW+ G + ++++L+ +VN + + ++ W
Sbjct: 462 STLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMW 521
Query: 479 FSFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
FS+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 522 FSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIN 581
Query: 537 --LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGI 589
L D Y ++ S + +Q+ R + +N +E E Q N
Sbjct: 582 DPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLH 640
Query: 590 AAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKM 649
A +D + Q C T E F++ GFG SP +VS AIL E M
Sbjct: 641 AFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLAILKSHENGFM 698
Query: 650 KEIEDAWFKKHSSC 663
++++ W + + C
Sbjct: 699 EDLDKTWVR-YQEC 711
Score = 81 (33.6 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 34/128 (26%), Positives = 54/128 (42%)
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEA-FGISQNGPKLLQALSSIRF-RGLTGDYIF-V 241
AVAV + F+K N++ I + GP + L S ++ G+TG F
Sbjct: 199 AVAVVAQAVHDL-FEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFNE 257
Query: 242 DGQLQSSAFEIINVNNGAR-GVGFWSPEKGXXXXXXXXXXXXXXXRPIIWPGDSTSDPKG 300
DG + + + I+N+ N VG ++ R IIWPG T P+G
Sbjct: 258 DGDRKFANYSIMNLQNRKLVQVGIYNGSN-----------VLTNDRKIIWPGGETEKPQG 306
Query: 301 WEIPTNEK 308
+++ T K
Sbjct: 307 YQMSTKLK 314
Score = 62 (26.9 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 20/107 (18%), Positives = 41/107 (38%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDD 65
S Q +++ F W + I D+ G L L+ +++ P T +
Sbjct: 60 SHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLETLLEERESKAEKVLQFDP-GTKN 118
Query: 66 QIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
+ L + ++ RV IL + ++ A + + G VW++
Sbjct: 119 -VTSLLLEAKELEARVIILSASEDDAATVYRSAAMLNMTGSGYVWLV 164
>UNIPROTKB|F1PEI5 [details] [associations]
symbol:GRID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 OMA:CSFYTVG
EMBL:AAEX03016767 EMBL:AAEX03016766 Ensembl:ENSCAFT00000015920
GeneTree:ENSGT00610000087353 Uniprot:F1PEI5
Length = 922
Score = 221 (82.9 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 119/476 (25%), Positives = 195/476 (40%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARGVGFWSPEKGXXXXX 275
Q G +L+ + GLTG+ F + G + FEI+ N G +G + G
Sbjct: 279 QGGRSMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGTNYGEE-LGRGVRKLGCW--- 334
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P+ S +D K E LRV V V + FV V+ + +
Sbjct: 335 ----------NPVTGLNGSLTDKK-LENNMRGVVLRV-VTVLE--EPFVMVSENVLGKPK 380
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
G+SIDV A+ L + P Y P G++N L+ ++ D +
Sbjct: 381 KYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQ--EDGTWNGLVGELVFKRADIGISA 438
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGF 452
TI +R N VDFT Y + V +++ + K + + L P LW + +G
Sbjct: 439 LTITPDRENVVDFTTRYMDYSVGVLLR-RAEKTVDMFACLAPFDLSLWACIAGTVLLVGL 497
Query: 453 VVWVLEHRVNEDFRGPARHQVGT--------SFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+V++L ++ P R Q+G+ S WF + + V E + LA R ++
Sbjct: 498 LVYLL------NWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGA 551
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQKGSFVLGILKQLGF 562
W LI+I SYTA+L + LT+ +++ +I + L K+ D G S V ++ G
Sbjct: 552 WWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYGTVLDSAVYEHVRMKGM 611
Query: 563 D--ER--------KLVVYNSHEECDEL-FQKGSAN---GGIAAAFDEIPYAKLLIGQ-HC 607
+ ER +++ ++ E + L Q G G A +D + I C
Sbjct: 612 NPFERDSMYSQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDPDC 671
Query: 608 SKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC 663
S YT + T G+G A SP S+ IL + + M ++ W+ K+ C
Sbjct: 672 SFYT-IGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQC 726
Score = 101 (40.6 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 64/274 (23%), Positives = 108/274 (39%)
Query: 12 ITAIIKAFGWREAVPIYVDNQYGEELIPSLTDAL--QAIDTRVP-YRSVISPLATD--DQ 66
I ++ + W++ + I+ D++Y I D + Q +D + + I+ + T D
Sbjct: 71 ILRVVTEYAWQKFI-IFYDSEYDIRGIQEFLDKVSQQGMDVALQKVENNINKMITTLFDT 129
Query: 67 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPS 126
+ E + R IL M P+ + E L+ C WI+ + N + E
Sbjct: 130 LRIEELNRYRDTLRRAILVMNPATAKSFITEVVETNLVAFDCHWIIINEEINDVDVQE-L 188
Query: 127 VTDSMQGVIGVRPY--VPKTKALENFRVRWK-RKFLQENPSLFDAELNIFGLLAYDATSA 183
V S+ + +R VP+ + FR + L + F + I L YD
Sbjct: 189 VRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYDTVLL 248
Query: 184 LAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD- 242
LA A K ++S + + + Q G +L+ + GLTG+ F +
Sbjct: 249 LANAFHKKLEDRKWHSMASLSCIRKNSKPW---QGGRSMLETIKKGGVSGLTGELEFGEN 305
Query: 243 GQLQSSAFEIINVNNG---ARGV---GFWSPEKG 270
G + FEI+ N G RGV G W+P G
Sbjct: 306 GGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTG 339
>UNIPROTKB|O43424 [details] [associations]
symbol:GRID2 "Glutamate receptor ionotropic, delta-2"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0008066 "glutamate receptor activity"
evidence=TAS] [GO:0043523 "regulation of neuron apoptotic process"
evidence=ISS] [GO:0034613 "cellular protein localization"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=ISS] [GO:0060134 "prepulse inhibition"
evidence=ISS] [GO:0030165 "PDZ domain binding" evidence=ISS]
[GO:0097110 "scaffold protein binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISS] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS] [GO:0043197 "dendritic spine"
evidence=ISS] [GO:0045202 "synapse" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0034613 GO:GO:0030054 GO:GO:0045211 GO:GO:0006810
GO:GO:0043197 GO:GO:0035235 GO:GO:0045202 GO:GO:0060079
GO:GO:0060134 GO:GO:0035249 DrugBank:DB00142 GO:GO:0030288
GO:GO:0030165 GO:GO:0043523 InterPro:IPR001828 GO:GO:0097110
GO:GO:0008328 GO:GO:0005234 GO:GO:0008066 GO:GO:0004970
eggNOG:NOG276334 HOGENOM:HOG000264260 HOVERGEN:HBG051840 CTD:2895
KO:K05207 OrthoDB:EOG4SBDX4 EMBL:AF009014 EMBL:AB209318
EMBL:AC022317 EMBL:AC093596 EMBL:AC093733 EMBL:AC096769
EMBL:AC104077 EMBL:AC105315 EMBL:AC105452 EMBL:AC112695
EMBL:AC115111 EMBL:BC099652 EMBL:BC099653 IPI:IPI00747494
RefSeq:NP_001501.2 UniGene:Hs.480281 ProteinModelPortal:O43424
SMR:O43424 MINT:MINT-257823 STRING:O43424 PhosphoSite:O43424
PaxDb:O43424 PRIDE:O43424 Ensembl:ENST00000282020 GeneID:2895
KEGG:hsa:2895 UCSC:uc011cdt.2 GeneCards:GC04P093225
H-InvDB:HIX0031353 HGNC:HGNC:4576 MIM:602368 neXtProt:NX_O43424
PharmGKB:PA28971 InParanoid:O43424 OMA:CSFYTVG PhylomeDB:O43424
GenomeRNAi:2895 NextBio:11455 ArrayExpress:O43424 Bgee:O43424
CleanEx:HS_GRID2 Genevestigator:O43424 Uniprot:O43424
Length = 1007
Score = 219 (82.2 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 121/489 (24%), Positives = 200/489 (40%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARGVGFWSPEKGXXXXX 275
Q G +L+ + GLTG+ F + G + FEI+ N G +G + G
Sbjct: 364 QGGRSMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGTNYGEE-LGRGVRKLGCW--- 419
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P+ S +D K E LRV V V + FV V+ + +
Sbjct: 420 ----------NPVTGLNGSLTDKK-LENNMRGVVLRV-VTVLE--EPFVMVSENVLGKPK 465
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
G+SIDV A+ L + P Y P G++N L+ ++ D +
Sbjct: 466 KYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQ--EDGTWNGLVGELVFKRADIGISA 523
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGF 452
TI +R N VDFT Y + V +++ + K + + L P LW + +G
Sbjct: 524 LTITPDRENVVDFTTRYMDYSVGVLLR-RAEKTVDMFACLAPFDLSLWACIAGTVLLVGL 582
Query: 453 VVWVLEHRVNEDFRGPARHQVGT--------SFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+V++L ++ P R Q+G+ S WF + + V E + LA R ++
Sbjct: 583 LVYLL------NWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGA 636
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQKGSFVLGILKQLGF 562
W LI+I SYTA+L + LT+ +++ +I + L K+ + G S V ++ G
Sbjct: 637 WWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVLDSAVYEHVRMKGL 696
Query: 563 D--ER--------KLVVYNSHEECDEL-FQKGSAN---GGIAAAFDEIPYAKLLIGQ-HC 607
+ ER +++ ++ E + L Q G G A +D + I C
Sbjct: 697 NPFERDSMYSQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDPDC 756
Query: 608 SKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
S YT + T G+G A SP S+ IL + + M ++ W+ K+ C D
Sbjct: 757 SFYT-IGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQC-DLY 814
Query: 668 TVVSARSLG 676
+ V + G
Sbjct: 815 SSVDTKQKG 823
Score = 101 (40.6 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 66/278 (23%), Positives = 114/278 (41%)
Query: 12 ITAIIKAFGWREAVPIYVDNQYG----EELIPSLTD-----ALQAIDTRVPYRSVISPLA 62
I ++ + W++ + I+ D++Y +E + ++ ALQ ++ + +I+ L
Sbjct: 156 ILRVVTEYAWQKFI-IFYDSEYDIRGIQEFLDKVSQQGMDVALQKVENNI--NKMITTLF 212
Query: 63 TDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRT 122
+IE EL + + R IL M P+ + E L+ C WI+ + N +
Sbjct: 213 DTMRIE-ELNR-YRDTLRRAILVMNPATAKSFITEVVETNLVAFDCHWIIINEEINDVDV 270
Query: 123 LEPSVTDSMQGVIGVRPY--VPKTKALENFRVRWK-RKFLQENPSLFDAELNIFGLLAYD 179
E V S+ + +R VP+ + FR + L + F + I L YD
Sbjct: 271 QE-LVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYD 329
Query: 180 ATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYI 239
LA A K ++S + + + Q G +L+ + GLTG+
Sbjct: 330 TVLLLANAFHKKLEDRKWHSMASLSCIRKNSKPW---QGGRSMLETIKKGGVSGLTGELE 386
Query: 240 FVD-GQLQSSAFEIINVNNG---ARGV---GFWSPEKG 270
F + G + FEI+ N G RGV G W+P G
Sbjct: 387 FGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTG 424
>UNIPROTKB|E7EMV5 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC010613 EMBL:AC025156 EMBL:AC091960
EMBL:AC091962 HGNC:HGNC:4571 IPI:IPI00977433
ProteinModelPortal:E7EMV5 SMR:E7EMV5 Ensembl:ENST00000521843
ArrayExpress:E7EMV5 Bgee:E7EMV5 Uniprot:E7EMV5
Length = 839
Score = 150 (57.9 bits), Expect = 6.1e-19, Sum P(3) = 6.1e-19
Identities = 60/210 (28%), Positives = 94/210 (44%)
Query: 476 SFWFSFSTMV-----FSQRERVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQP 530
S WFS + S R R +S R V VW F LI+I SYTA+L + LTV+++
Sbjct: 521 SLWFSLGAFMQQGCDISPRSRSLSG--RIVGGVWWFFTLIIISSYTANLAAFLTVERMVS 578
Query: 531 TITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSA 585
I L K+ + + Y G+ G K+ F K+ V+ ++ + E +F + +
Sbjct: 579 PIESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTE 634
Query: 586 NGGIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVS 637
G I + YA LL I Q TM V + G+G A P S L + V+
Sbjct: 635 EGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVN 694
Query: 638 KAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
A+L + E + ++++ W+ C G
Sbjct: 695 LAVLKLNEQGLLDKLKNKWWYDKGECGSGG 724
Score = 126 (49.4 bits), Expect = 6.1e-19, Sum P(3) = 6.1e-19
Identities = 29/120 (24%), Positives = 57/120 (47%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y+ + V Y D + ++N ++ ++ G D V TI
Sbjct: 368 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 426
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGFVV 454
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 427 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 483
Score = 88 (36.0 bits), Expect = 6.1e-19, Sum P(3) = 6.1e-19
Identities = 61/274 (22%), Positives = 117/274 (42%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 63 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 118
Query: 71 LYK-LFTMQTRVFIL-----HMLPSLGSRIFEKANEIG----LMNKGCVWI----MTDGM 116
L++ L + R+ ++ + LG I + N IG L N G + I +
Sbjct: 119 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 178
Query: 117 TNLLRTLEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLL 176
N+ + TD++ I ++ + + A ++ RV WKR P A L
Sbjct: 179 ANVTGFQLVNYTDTIPAKI-MQQW-KNSDARDHTRVDWKR------PKYTSA-------L 223
Query: 177 AYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTG 236
YD +A A + + + + A Q G + +AL +RF GLTG
Sbjct: 224 TYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLTG 282
Query: 237 DYIFVD-GQLQSSAFEIINV-NNGARGVGFWSPE 268
+ F + G+ + +I + ++G R +G+W+ +
Sbjct: 283 NVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 316
Score = 44 (20.5 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 26 PIYVDNQYGEELIPSLTDALQAI 48
P+ NQ+ +L P L DAL +I
Sbjct: 45 PVDTSNQFVLQLRPELQDALISI 67
>ZFIN|ZDB-GENE-020125-5 [details] [associations]
symbol:gria3a "glutamate receptor, ionotropic, AMPA
3a" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
HOVERGEN:HBG051839 KO:K05199 EMBL:AF525745 IPI:IPI00483360
RefSeq:NP_938153.1 UniGene:Dr.133590 ProteinModelPortal:Q71E61
SMR:Q71E61 GeneID:170452 KEGG:dre:170452 CTD:170452
InParanoid:Q71E61 NextBio:20797093 Uniprot:Q71E61
Length = 886
Score = 194 (73.4 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 72/256 (28%), Positives = 115/256 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + ++N ++ ++ G D V TI
Sbjct: 446 GYCVDLASEIAKHVGIKYKLSIVADGKYGARDPETK-TWNGMVGELVYGRADIAVAPLTI 504
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 505 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 561
Query: 454 VWVLEHRV---------NEDFRGPAR-----HQVG--TSFWFSFSTMVFSQRERVIS--N 495
V L R NE+ + P + G S WFS F Q+ IS +
Sbjct: 562 VLFLVSRFSPYEWHLDDNEETKDPQTPPDPPNDFGIFNSLWFSLGA--FMQQGCDISPRS 619
Query: 496 LA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVL 554
L+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+
Sbjct: 620 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDS 676
Query: 555 GILKQLGFDERKLVVY 570
G K+ F K+ VY
Sbjct: 677 GSTKEF-FRRSKIAVY 691
Score = 142 (55.0 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 64/219 (29%), Positives = 101/219 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 600 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 657
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ VY S+ + E +F K + +G
Sbjct: 658 ESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPSVFVKTTPDG 713
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ +A LL I Q TM V + G+G A P S L VS A
Sbjct: 714 VARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVSLA 773
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLN 678
+L ++E + ++++ W+ C +V ++ L+
Sbjct: 774 VLKLSEQGILDKLKNKWWYDKGECGTKDSVSKDKTSALS 812
Score = 117 (46.2 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 54/263 (20%), Positives = 116/263 (44%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV---ISPLATDDQ 66
GA+ +++ + W + V +Y D G ++ ++ ++ + +V RSV + PL +
Sbjct: 140 GALLSLLAHYKWEKFVYLY-DTDRGFSILQAIMESAVMNNWQVTARSVGNIVDPL----E 194
Query: 67 IEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEP 125
+ + ++ Q + F++ + I E+ G ++G +I+ + G TN+ +L+
Sbjct: 195 YRRIIEEMDRRQEKRFLIDCEVERINSILEQVVIAGKNSRGYHYILANLGFTNM--SLD- 251
Query: 126 SVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALA 185
V + G + P + ++ F R +R +E P + L L +DA +A
Sbjct: 252 KVFPGGANITGFQIINPDSPIVQQFLQRRERLDEREFPESRSSPLKYTSALTHDAILVIA 311
Query: 186 VAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQ 244
A + + + A SQ G + +AL ++ +G+TG+ F G+
Sbjct: 312 EAFRYLRRQRVDISRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDSFGR 370
Query: 245 LQSSAFEIINVN-NGARGVGFWS 266
+ ++ + GAR +G+W+
Sbjct: 371 RSNYTVDVYEMKPGGARKIGYWN 393
>ZFIN|ZDB-GENE-030131-8013 [details] [associations]
symbol:gria4b "glutamate receptor, ionotropic,
AMPA 4b" species:7955 "Danio rerio" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030131-8013 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839
KO:K05200 EMBL:AF525748 IPI:IPI00509003 RefSeq:NP_997917.1
UniGene:Dr.81140 ProteinModelPortal:Q71E58 SMR:Q71E58 GeneID:336069
KEGG:dre:336069 CTD:336069 InParanoid:Q71E58 NextBio:20811163
Uniprot:Q71E58
Length = 904
Score = 202 (76.2 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 67/253 (26%), Positives = 114/253 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + + VP Y D + +N ++ ++ G+ + V TI
Sbjct: 445 GYCVDLASEIAKHIGFKYKISIVPDGKYGARDPETK-IWNGMVGELVYGKAEIAVAPLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVW 455
R +DF+ P+ G+S+++ K + FL PL +++W+ +I + V++
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLF 563
Query: 456 VL------EHRVNEDFRG---------PARHQVGTSFWFSFSTMVFSQRERVIS--NLA- 497
++ E E G P + S WFS F Q+ IS +L+
Sbjct: 564 LVSRFSPYEWHTEEPEEGTDGLPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSLSG 621
Query: 498 RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGIL 557
R V VW F LI+I SYTA+L + LTV+++ I L K+ D + Y G+ G
Sbjct: 622 RIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTD-IAY--GTLDSGST 678
Query: 558 KQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 679 KEF-FRRSKIAVY 690
Score = 157 (60.3 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 65/217 (29%), Positives = 99/217 (45%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 591 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 648
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ D + Y G+ G K+ F K+ VY S+ + E +
Sbjct: 649 VERMVSPIESAEDLAKQTD-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPTV 704
Query: 580 FQKGSANGGIAAAFDEIPYAKLLIGQHCSKYT-MVEP--TFKTAG------FGFAFPLHS 630
F K +A G + YA L+ ++YT +P T K G +G A P S
Sbjct: 705 FTKTTAEGVARVRKSKGKYA-FLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGS 763
Query: 631 PLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
L V+ A+L + E + ++++ W+ C G
Sbjct: 764 QLGSAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 800
Score = 106 (42.4 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 59/265 (22%), Positives = 111/265 (41%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GA+ +++ + W V +Y D G ++ ++ + +V S I +D +
Sbjct: 140 GALLSLLDHYDWNRFVFLY-DTDRGYSILQAIMEKAGQNGWQV---SAICVENFNDASYR 195
Query: 70 ELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMT--NLLRTLE- 124
+L + L Q + F++ + + + E+ +G KG +IM + G NL R +
Sbjct: 196 QLLEDLDRRQEKTFVIDLEAERLNNMLEQIVSVGKHVKGYHYIMANLGFKDINLERFMHG 255
Query: 125 -PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSA 183
+VT Q V P V K ++ RW + +E P DA L YD
Sbjct: 256 GANVT-GFQLVDFSNPMV--IKLMQ----RWNKLDQREYPGS-DAPPKYTSALTYDGVMV 307
Query: 184 LAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD- 242
+A A + ++ + A +Q G + + L +R +GLTG+ F
Sbjct: 308 MAEAFRNLRRQKVDISRRGIAGDCLANPAAPWNQ-GIDMERTLKQVRLQGLTGNVQFDHY 366
Query: 243 GQLQSSAFEIINV-NNGARGVGFWS 266
G+ + ++ + +NG R +G+W+
Sbjct: 367 GRRVNYTMDVFELKSNGPRRIGYWN 391
>UNIPROTKB|E9PH24 [details] [associations]
symbol:GRID2 "Glutamate receptor ionotropic, delta-2"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC022317 EMBL:AC093596 EMBL:AC093733
EMBL:AC096769 EMBL:AC104077 EMBL:AC105315 EMBL:AC105452
EMBL:AC112695 EMBL:AC115111 HGNC:HGNC:4576 EMBL:AC020699
EMBL:AC095059 EMBL:AC108158 EMBL:AC110800 EMBL:AC115537
IPI:IPI00963845 ProteinModelPortal:E9PH24 SMR:E9PH24
Ensembl:ENST00000510992 UCSC:uc011cdu.2 ArrayExpress:E9PH24
Bgee:E9PH24 Uniprot:E9PH24
Length = 912
Score = 219 (82.2 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 121/489 (24%), Positives = 200/489 (40%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARGVGFWSPEKGXXXXX 275
Q G +L+ + GLTG+ F + G + FEI+ N G +G + G
Sbjct: 269 QGGRSMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGTNYGEE-LGRGVRKLGCW--- 324
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P+ S +D K E LRV V V + FV V+ + +
Sbjct: 325 ----------NPVTGLNGSLTDKK-LENNMRGVVLRV-VTVLE--EPFVMVSENVLGKPK 370
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
G+SIDV A+ L + P Y P G++N L+ ++ D +
Sbjct: 371 KYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQ--EDGTWNGLVGELVFKRADIGISA 428
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGF 452
TI +R N VDFT Y + V +++ + K + + L P LW + +G
Sbjct: 429 LTITPDRENVVDFTTRYMDYSVGVLLR-RAEKTVDMFACLAPFDLSLWACIAGTVLLVGL 487
Query: 453 VVWVLEHRVNEDFRGPARHQVGT--------SFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+V++L ++ P R Q+G+ S WF + + V E + LA R ++
Sbjct: 488 LVYLL------NWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGA 541
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQKGSFVLGILKQLGF 562
W LI+I SYTA+L + LT+ +++ +I + L K+ + G S V ++ G
Sbjct: 542 WWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVLDSAVYEHVRMKGL 601
Query: 563 D--ER--------KLVVYNSHEECDEL-FQKGSAN---GGIAAAFDEIPYAKLLIGQ-HC 607
+ ER +++ ++ E + L Q G G A +D + I C
Sbjct: 602 NPFERDSMYSQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDPDC 661
Query: 608 SKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
S YT + T G+G A SP S+ IL + + M ++ W+ K+ C D
Sbjct: 662 SFYT-IGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQC-DLY 719
Query: 668 TVVSARSLG 676
+ V + G
Sbjct: 720 SSVDTKQKG 728
Score = 88 (36.0 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 60/237 (25%), Positives = 95/237 (40%)
Query: 44 ALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGL 103
ALQ ++ + +I+ L +IE EL + + R IL M P+ + E L
Sbjct: 101 ALQKVENNI--NKMITTLFDTMRIE-ELNR-YRDTLRRAILVMNPATAKSFITEVVETNL 156
Query: 104 MNKGCVWIMTDGMTNLLRTLEPSVTDSMQGVIGVRPY--VPKTKALENFRVRWK-RKFLQ 160
+ C WI+ + N + E V S+ + +R VP+ + FR + L
Sbjct: 157 VAFDCHWIIINEEINDVDVQE-LVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLC 215
Query: 161 ENPSLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGP 220
+ F + I L YD LA A K ++S + + + Q G
Sbjct: 216 DPKDPFAQNMEISNLYIYDTVLLLANAFHKKLEDRKWHSMASLSCIRKNSKPW---QGGR 272
Query: 221 KLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNG---ARGV---GFWSPEKG 270
+L+ + GLTG+ F + G + FEI+ N G RGV G W+P G
Sbjct: 273 SMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTG 329
>ZFIN|ZDB-GENE-051202-2 [details] [associations]
symbol:grin1b "glutamate receptor, ionotropic,
N-methyl D-aspartate 1b" species:7955 "Danio rerio" [GO:0004872
"receptor activity" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-051202-2
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 KO:K05208
InterPro:IPR018882 Pfam:PF10562 HOGENOM:HOG000231491
HOVERGEN:HBG052638 OMA:VYRSAAM EMBL:BX276128 EMBL:AL831768
IPI:IPI00616850 RefSeq:NP_001137603.1 UniGene:Dr.83363 SMR:Q6ZM67
Ensembl:ENSDART00000034849 GeneID:100005675 KEGG:dre:100005675
CTD:100005675 InParanoid:Q6ZM67 NextBio:20786787 Uniprot:Q6ZM67
Length = 937
Score = 208 (78.3 bits), Expect = 6.0e-18, Sum P(3) = 6.0e-18
Identities = 74/313 (23%), Positives = 142/313 (45%)
Query: 367 DGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR 426
+ ++ +N ++ ++ G D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 507 NNSNKKEWNGMMGELLSGLADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPRS 565
Query: 427 NAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFWF 479
F+QP LW+ G + ++++L+ +VN + + ++ WF
Sbjct: 566 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 625
Query: 480 SFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN- 536
S+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 626 SWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIND 685
Query: 537 -LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGIA 590
L D Y ++ S + +Q+ R + +N +E E Q N A
Sbjct: 686 PRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLHA 744
Query: 591 AAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMK 650
+D + Q C T E F++ GFG SP +VS AIL+ E M+
Sbjct: 745 FIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLAILSSHENGFME 802
Query: 651 EIEDAWFKKHSSC 663
+++ W + + C
Sbjct: 803 DLDKTWVR-YQEC 814
Score = 88 (36.0 bits), Expect = 6.0e-18, Sum P(3) = 6.0e-18
Identities = 44/171 (25%), Positives = 76/171 (44%)
Query: 178 YDATSALAVAVEKAGITGFGFDKTNVSSNATDLEA-FGISQNGPKLLQALSSIRFR-GLT 235
YDA + +A ++++ F+K N++ I + GP + L S ++ GLT
Sbjct: 299 YDAVAVVAQSIQEL------FEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGLT 352
Query: 236 GDYIFVD-GQLQSSAFEIINVNNGAR-GVGFWSPEKGXXXXXXXXXXXXXXXRPIIWPGD 293
G F D G + + + I+N VG ++ + R IIWPG
Sbjct: 353 GRVEFNDDGDRRFAHYSILNYQKTRLVQVGVYNGSQ----------VVMNAQRKIIWPGG 402
Query: 294 STSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKT--QETSVVGYSI 342
T PKG+++ T +L++ ++ F +VK T+ T +E +V G I
Sbjct: 403 ETEKPKGYQMST---RLKIVTIHQEPFV-YVKPTLRDGTCKEEHTVNGVKI 449
Score = 57 (25.1 bits), Expect = 6.0e-18, Sum P(3) = 6.0e-18
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 43 DALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIG 102
D L + R P + + D + L + ++ RV IL + I++ A ++
Sbjct: 197 DQLSFDNKRGPKAEKVLLFSQDTNLTALLQEAKELEARVIILSASEDEAAAIYKVARQLN 256
Query: 103 LMNKGCVWIM 112
+ G VW++
Sbjct: 257 MTGSGYVWLV 266
Score = 40 (19.1 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 18/85 (21%), Positives = 37/85 (43%)
Query: 15 IIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV--ISPLATDDQIEKELY 72
+++ F W + I D+ G L L+ +T+ R+ + L+ D++ +
Sbjct: 151 MMREFQWNHIILIVSDDHEGRAAQKRLETLLEERETKSKNRNYENLDQLSFDNKRGPKAE 210
Query: 73 K--LFTMQTRVF-ILHMLPSLGSRI 94
K LF+ T + +L L +R+
Sbjct: 211 KVLLFSQDTNLTALLQEAKELEARV 235
>ZFIN|ZDB-GENE-020125-1 [details] [associations]
symbol:gria1a "glutamate receptor, ionotropic, AMPA
1a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-1
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05197 EMBL:AF525741
IPI:IPI00512681 RefSeq:NP_991161.1 UniGene:Dr.88082
ProteinModelPortal:Q71E65 SMR:Q71E65 GeneID:798689 KEGG:dre:798689
CTD:798689 InParanoid:Q71E65 NextBio:20933517 Uniprot:Q71E65
Length = 914
Score = 154 (59.3 bits), Expect = 8.6e-18, Sum P(3) = 8.6e-18
Identities = 63/208 (30%), Positives = 97/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 609 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 666
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SH-EECD-ELFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V+ S+ + D +F K + G
Sbjct: 667 ESAEDLAKQTE-IAY--GTLDAGSTKEF-FRRSKIAVFEKMWSYMKSADPSVFVKTTDEG 722
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ + YA LL I Q TM V + G+G A P SPL + V+ A
Sbjct: 723 VMRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSPLRNPVNLA 782
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 783 VLKLNEQGLLDKLKNKWWYDKGECGSGG 810
Score = 119 (46.9 bits), Expect = 8.6e-18, Sum P(3) = 8.6e-18
Identities = 29/120 (24%), Positives = 55/120 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y V Y D + +N ++ ++ G+ D V TI
Sbjct: 435 GYCVELAAEIAKHVGYHYILKIVADGKYGARDAETM-MWNGMVGELVYGKADVAVAPLTI 493
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGFVV 454
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 494 TLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 550
Score = 81 (33.6 bits), Expect = 8.6e-18, Sum P(3) = 8.6e-18
Identities = 51/268 (19%), Positives = 106/268 (39%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ +I+ + W + V +Y + L+ + +DT + +++ + + E
Sbjct: 131 ALVGVIEHYRWSKFVYMYSSDS-------GLSVLQKVLDTAAEHNWLVTSVNVETMTEAS 183
Query: 71 LYKLFT-----MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEP 125
K+F + ++ I L L S I +K E+G K +I+ + L L+
Sbjct: 184 FLKVFQDLDKKKEGQIIIDCELERLTS-ILKKIIELGKNVKSYHYILAN-----LGFLDI 237
Query: 126 SVTDSMQGVIGVRPYVPKTKALENFR--VRWKRKFLQENPSLFDAELNIFGLLAYDATSA 183
+T+ +G V + A N V+ +F ++ + L G L YD
Sbjct: 238 DLTEFKKGEANVTGFQLVNYADPNVSRTVQQWMEFDNKDAKVPKRRLKYTGALTYDGVKV 297
Query: 184 LAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD- 242
++ A + + + Q G + +AL +R GLTG F +
Sbjct: 298 MSTAFQNLRRQRIDISRRGNAGECLANPPAPWGQ-GIDIQRALQQVRIEGLTGHIQFNEK 356
Query: 243 GQLQSSAFEIINVN-NGARGVGFWSPEK 269
G+ + + ++ + G + VG+W+ ++
Sbjct: 357 GRRTNYSISVMELRPTGPKKVGYWNEDE 384
Score = 43 (20.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 387 DAVVGDTTIVFNRSNYVDFTLPYT-ESGVSMIVPIKDSKKRNAWV 430
DA+VG V + F Y+ +SG+S++ + D+ + W+
Sbjct: 130 DALVG----VIEHYRWSKFVYMYSSDSGLSVLQKVLDTAAEHNWL 170
Score = 39 (18.8 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 26 PIYVDNQYGEELIPSLTDALQAI 48
P+ NQ+ +L P L DAL +
Sbjct: 113 PMENSNQFVIQLRPELQDALVGV 135
>UNIPROTKB|F1P2K1 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0007585 "respiratory gaseous
exchange" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0018964 "propylene metabolic
process" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0021586 "pons maturation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0035176
"social behavior" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043278 "response to morphine"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060134 "prepulse inhibition"
evidence=IEA] [GO:0060179 "male mating behavior" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0005509
GO:GO:0001975 GO:GO:0043524 GO:GO:0030288 GO:GO:0042391
GO:GO:0043065 GO:GO:0006874 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0004972 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00819235
Ensembl:ENSGALT00000040367 Uniprot:F1P2K1
Length = 797
Score = 225 (84.3 bits), Expect = 1.1e-17, Sum P(4) = 1.1e-17
Identities = 91/374 (24%), Positives = 164/374 (43%)
Query: 313 GVPVKKGFSDFVKVTIDPK-TQETSVVGYSIDVF--KAVIEELPYAV--AYD--FVPYAQ 365
G PVKK F TI + T G+ ID+ A + Y V D F +
Sbjct: 364 GDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQER 423
Query: 366 PDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKK 425
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 424 VNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPR 482
Query: 426 RNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFW 478
F+QP LW+ G + ++++L+ +VN + + ++ W
Sbjct: 483 STLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMW 542
Query: 479 FSFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
FS+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 543 FSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIN 602
Query: 537 --LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGI 589
L D Y ++ S + +Q+ R + +N +E E Q N
Sbjct: 603 DPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLH 661
Query: 590 AAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKM 649
A +D + Q C T E F++ GFG SP +VS AIL E M
Sbjct: 662 AFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLAILKSHENGFM 719
Query: 650 KEIEDAWFKKHSSC 663
++++ W + + C
Sbjct: 720 EDLDKTWVR-YQEC 732
Score = 81 (33.6 bits), Expect = 1.1e-17, Sum P(4) = 1.1e-17
Identities = 34/128 (26%), Positives = 54/128 (42%)
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEA-FGISQNGPKLLQALSSIRF-RGLTGDYIF-V 241
AVAV + F+K N++ I + GP + L S ++ G+TG F
Sbjct: 220 AVAVVAQAVHDL-FEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFNE 278
Query: 242 DGQLQSSAFEIINVNNGAR-GVGFWSPEKGXXXXXXXXXXXXXXXRPIIWPGDSTSDPKG 300
DG + + + I+N+ N VG ++ R IIWPG T P+G
Sbjct: 279 DGDRKFANYSIMNLQNRKLVQVGIYNGSN-----------VLTNDRKIIWPGGETEKPQG 327
Query: 301 WEIPTNEK 308
+++ T K
Sbjct: 328 YQMSTKLK 335
Score = 43 (20.2 bits), Expect = 1.1e-17, Sum P(4) = 1.1e-17
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 77 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 150 LEARVIILSASEDDAATVYRSAAMLNMTGSGYVWLV 185
Score = 38 (18.4 bits), Expect = 1.1e-17, Sum P(4) = 1.1e-17
Identities = 10/51 (19%), Positives = 20/51 (39%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRS 56
S Q +++ F W + I D+ G L L+ +++ R+
Sbjct: 60 SHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLETLLEERESKSKKRN 110
>UNIPROTKB|F1NKY9 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00821429
Ensembl:ENSGALT00000014471 Uniprot:F1NKY9
Length = 856
Score = 225 (84.3 bits), Expect = 1.7e-17, Sum P(4) = 1.7e-17
Identities = 91/374 (24%), Positives = 164/374 (43%)
Query: 313 GVPVKKGFSDFVKVTIDPK-TQETSVVGYSIDVF--KAVIEELPYAV--AYD--FVPYAQ 365
G PVKK F TI + T G+ ID+ A + Y V D F +
Sbjct: 364 GDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQER 423
Query: 366 PDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKK 425
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 424 VNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPR 482
Query: 426 RNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFW 478
F+QP LW+ G + ++++L+ +VN + + ++ W
Sbjct: 483 STLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMW 542
Query: 479 FSFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
FS+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 543 FSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIN 602
Query: 537 --LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGI 589
L D Y ++ S + +Q+ R + +N +E E Q N
Sbjct: 603 DPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLH 661
Query: 590 AAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKM 649
A +D + Q C T E F++ GFG SP +VS AIL E M
Sbjct: 662 AFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLAILKSHENGFM 719
Query: 650 KEIEDAWFKKHSSC 663
++++ W + + C
Sbjct: 720 EDLDKTWVR-YQEC 732
Score = 81 (33.6 bits), Expect = 1.7e-17, Sum P(4) = 1.7e-17
Identities = 34/128 (26%), Positives = 54/128 (42%)
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEA-FGISQNGPKLLQALSSIRF-RGLTGDYIF-V 241
AVAV + F+K N++ I + GP + L S ++ G+TG F
Sbjct: 220 AVAVVAQAVHDL-FEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFNE 278
Query: 242 DGQLQSSAFEIINVNNGAR-GVGFWSPEKGXXXXXXXXXXXXXXXRPIIWPGDSTSDPKG 300
DG + + + I+N+ N VG ++ R IIWPG T P+G
Sbjct: 279 DGDRKFANYSIMNLQNRKLVQVGIYNGSN-----------VLTNDRKIIWPGGETEKPQG 327
Query: 301 WEIPTNEK 308
+++ T K
Sbjct: 328 YQMSTKLK 335
Score = 43 (20.2 bits), Expect = 1.7e-17, Sum P(4) = 1.7e-17
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 77 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 150 LEARVIILSASEDDAATVYRSAAMLNMTGSGYVWLV 185
Score = 38 (18.4 bits), Expect = 1.7e-17, Sum P(4) = 1.7e-17
Identities = 10/51 (19%), Positives = 20/51 (39%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRS 56
S Q +++ F W + I D+ G L L+ +++ R+
Sbjct: 60 SHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLETLLEERESKSKKRN 110
>UNIPROTKB|F1P2J8 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0007585 "respiratory gaseous
exchange" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0018964 "propylene metabolic
process" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0021586 "pons maturation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0035176
"social behavior" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043278 "response to morphine"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060134 "prepulse inhibition"
evidence=IEA] [GO:0060179 "male mating behavior" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0005509
GO:GO:0001975 GO:GO:0043524 GO:GO:0030288 GO:GO:0042391
GO:GO:0043065 GO:GO:0006874 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0004972 InterPro:IPR018882
Pfam:PF10562 OMA:VYRSAAM EMBL:AADN02026958 IPI:IPI00639787
ProteinModelPortal:F1P2J8 Ensembl:ENSGALT00000040370 Uniprot:F1P2J8
Length = 901
Score = 225 (84.3 bits), Expect = 2.3e-17, Sum P(4) = 2.3e-17
Identities = 91/374 (24%), Positives = 164/374 (43%)
Query: 313 GVPVKKGFSDFVKVTIDPK-TQETSVVGYSIDVF--KAVIEELPYAV--AYD--FVPYAQ 365
G PVKK F TI + T G+ ID+ A + Y V D F +
Sbjct: 364 GDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQER 423
Query: 366 PDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKK 425
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 424 VNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPR 482
Query: 426 RNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFW 478
F+QP LW+ G + ++++L+ +VN + + ++ W
Sbjct: 483 STLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMW 542
Query: 479 FSFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
FS+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 543 FSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIN 602
Query: 537 --LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGI 589
L D Y ++ S + +Q+ R + +N +E E Q N
Sbjct: 603 DPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLH 661
Query: 590 AAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKM 649
A +D + Q C T E F++ GFG SP +VS AIL E M
Sbjct: 662 AFIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLAILKSHENGFM 719
Query: 650 KEIEDAWFKKHSSC 663
++++ W + + C
Sbjct: 720 EDLDKTWVR-YQEC 732
Score = 81 (33.6 bits), Expect = 2.3e-17, Sum P(4) = 2.3e-17
Identities = 34/128 (26%), Positives = 54/128 (42%)
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEA-FGISQNGPKLLQALSSIRF-RGLTGDYIF-V 241
AVAV + F+K N++ I + GP + L S ++ G+TG F
Sbjct: 220 AVAVVAQAVHDL-FEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFNE 278
Query: 242 DGQLQSSAFEIINVNNGAR-GVGFWSPEKGXXXXXXXXXXXXXXXRPIIWPGDSTSDPKG 300
DG + + + I+N+ N VG ++ R IIWPG T P+G
Sbjct: 279 DGDRKFANYSIMNLQNRKLVQVGIYNGSN-----------VLTNDRKIIWPGGETEKPQG 327
Query: 301 WEIPTNEK 308
+++ T K
Sbjct: 328 YQMSTKLK 335
Score = 43 (20.2 bits), Expect = 2.3e-17, Sum P(4) = 2.3e-17
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 77 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 150 LEARVIILSASEDDAATVYRSAAMLNMTGSGYVWLV 185
Score = 38 (18.4 bits), Expect = 2.3e-17, Sum P(4) = 2.3e-17
Identities = 10/51 (19%), Positives = 20/51 (39%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRS 56
S Q +++ F W + I D+ G L L+ +++ R+
Sbjct: 60 SHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLETLLEERESKSKKRN 110
>UNIPROTKB|F1NW92 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02028659 EMBL:AADN02028660 IPI:IPI00585053
Ensembl:ENSGALT00000006493 Uniprot:F1NW92
Length = 902
Score = 204 (76.9 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 73/255 (28%), Positives = 118/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y + V Y D + ++N ++ ++ G D V TI
Sbjct: 437 GYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTK-TWNGMVGELVYGRADVAVAPLTI 495
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 552
Query: 454 VWVLEHRVN------EDFR-G---PARHQVG-----TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F G PA Q S WFS F Q+ IS +L
Sbjct: 553 VLFLVSRFSPYEWHTEEFEEGRDQPANDQTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 610
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 611 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAG 667
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ V+
Sbjct: 668 STKEF-FRRSKIAVF 681
Score = 146 (56.5 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 590 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 647
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V+ ++ + E +F + + G
Sbjct: 648 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 703
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
I + YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 704 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 763
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 764 VLKLNEQGLLDKLKNKWWYDKGECGSGG 791
Score = 96 (38.9 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 51/264 (19%), Positives = 112/264 (42%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ ++I+ + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 132 ALISVIEHYSWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRV 187
Query: 71 LYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L++ L + R+ ++ + I K ++ G +I+ + G ++ T
Sbjct: 188 LFQELQKKKERLVVVDCESERLNIILSKIIKLEKNGNGYHYILANMGFMDIDLT---KFR 244
Query: 129 DSMQGVIGVRPYVPKTKALE-NFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVA 187
+S V G + V T + +W+ +E P + L YD +A A
Sbjct: 245 ESGANVTGFQ-LVNYTDTVPARIMQQWRNNDARELPRVDWKRPKYTSALTYDGVRVMAEA 303
Query: 188 VEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQ 246
+ + + + A Q G + +AL +RF GL+G+ F + G+
Sbjct: 304 FQNLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLSGNVQFNEKGRRT 362
Query: 247 SSAFEIINV-NNGARGVGFWSPEK 269
+ +I + ++G R +G+W+ ++
Sbjct: 363 NYTLHVIEMKHDGIRKIGYWNEDE 386
Score = 44 (20.5 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 26 PIYVDNQYGEELIPSLTDALQAI 48
P+ NQ+ +L P L DAL ++
Sbjct: 114 PVETSNQFVLQLRPELQDALISV 136
Score = 39 (18.8 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 16 IKAFG-WRE---AVPIYVDNQYGEE 36
I+ G W E VP+ +D Q G E
Sbjct: 376 IRKIGYWNEDEKLVPVAIDTQTGNE 400
>TIGR_CMR|SPO_3335 [details] [associations]
symbol:SPO_3335 "glutamine ABC transporter, periplasmic
glutamine-binding protein" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0006868 "glutamine transport" evidence=ISS] [GO:0015186
"L-glutamine transmembrane transporter activity" evidence=ISS]
[GO:0016597 "amino acid binding" evidence=ISS] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00062 GO:GO:0016020 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0035235 GO:GO:0030288 GO:GO:0005234 GO:GO:0004970 KO:K02030
RefSeq:YP_168531.1 ProteinModelPortal:Q5LN77 GeneID:3194025
KEGG:sil:SPO3335 PATRIC:23380121 HOGENOM:HOG000123673 OMA:LIWLAER
ProtClustDB:CLSK751639 Uniprot:Q5LN77
Length = 361
Score = 236 (88.1 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 73/293 (24%), Positives = 131/293 (44%)
Query: 374 YNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQ 433
++D++ V GE D + + +I R +DF+ P ESG+ ++VP + + + L
Sbjct: 79 FSDMLAAVMDGEADMAIANISITAARETEMDFSQPIFESGLQILVPAETNAGSSLLRAL- 137
Query: 434 PLTWDLWVTSGCFFIFI---GFVVWVLEHRVNEDFRGPARHQVGTSFWFSFSTMVFSQRE 490
L+ DL++ G F+ + G ++W E R F SFW++ + +V E
Sbjct: 138 -LSRDLFLAIGAAFVILLTGGMLMWYFERRAQPYFDRKLHEAWFPSFWWALNLVVNGGFE 196
Query: 491 RVISNLA--RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQ 548
+ A R ++ L ++ +TA +TS++TV+ + ++ VN L G VG
Sbjct: 197 ERVPRTAFGRLFGVLLVISSLFVVSVFTARITSVMTVEAISGSVNSVNDLY--GQEVGTI 254
Query: 549 KGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPYAKLLIGQHCS 608
GS G L + D ++ +E F++G+ + A FD + Q
Sbjct: 255 DGSTAAGFLTRRDID---FAAFSDLQEMITAFERGALD---AIVFDAPILSYYASHQGKG 308
Query: 609 KYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHS 661
K F +G AFP S V +V++A+L + E +E+ WF + +
Sbjct: 309 KAVTTGAIFLRENYGIAFPTGSARVEEVNQALLALREDGTYEELYRKWFGRRN 361
>UNIPROTKB|F1MCM2 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0001640 "adenylate cyclase inhibiting
G-protein coupled glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GeneTree:ENSGT00590000083056
OMA:EEQAFRF GO:GO:0001640 EMBL:DAAA02009187 IPI:IPI00709026
Ensembl:ENSBTAT00000012214 Uniprot:F1MCM2
Length = 881
Score = 183 (69.5 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 58/218 (26%), Positives = 97/218 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY ID+ K + L ++ V Y D G +N +I ++ + D V TI
Sbjct: 426 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMIKELIDHKADLAVAPLTI 483
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSGCFF 447
R +DF+ P+ GVS++ + + + FL PL+ D+W+ S F
Sbjct: 484 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 543
Query: 448 IFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+ F W H N + + SFWF +++ E + L+ R + +
Sbjct: 544 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 603
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 604 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 641
Score = 155 (59.6 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 55/215 (25%), Positives = 99/215 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF +++ E + L+ R + +W F LI+I SYTA+L + LTV++++ I
Sbjct: 575 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 634
Query: 535 VNLL----------IKRGDNVGYQKGSFVLGILKQLGFDERK--LVVYNSHEECDELFQK 582
+ L +K G + + K S + K F K +V N+ E
Sbjct: 635 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTL-- 692
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+A+ + I Y + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 693 -TADYALLMESTTIEY---VTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQ 747
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGL 677
+ E DK+ +++ W++ S CP+ A +LG+
Sbjct: 748 LQEEDKLHIMKEKWWRG-SGCPEEENK-EASALGI 780
Score = 114 (45.2 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 60/269 (22%), Positives = 111/269 (41%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQ--IE 68
AI +++ WR A +Y D+ G + L A + R+ R + PL +DD +
Sbjct: 124 AILDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PLDSDDSRPLL 180
Query: 69 KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVT 128
KE+ + + R+ I ++ ++I ++A +G+M + +I T + LEP
Sbjct: 181 KEMKR--GREFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRY 236
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSAL 184
+ + G R + +W + LQ P L D + L YDA +
Sbjct: 237 SGVN-LTGFRILNVDNPHVSAIVEKWSMERLQAAPRAESGLLDGVMMTDAALLYDAVHIV 295
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VD 242
+V ++A ++ N+ + G + + + ++ GLTG +F
Sbjct: 296 SVCYQRA---------PQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTS 346
Query: 243 GQLQSSAFEIINVN-NGARGVGFWSPEKG 270
G +II++ +G VG WSP +G
Sbjct: 347 GLRTDFDLDIISLKEDGLEKVGVWSPAEG 375
>UNIPROTKB|F1SV43 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015277 "kainate selective glutamate receptor activity"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0001640 "adenylate cyclase inhibiting G-protein
coupled glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0015277
GeneTree:ENSGT00590000083056 OMA:EEQAFRF GO:GO:0001640
EMBL:FP104549 Ensembl:ENSSSCT00000004036 Uniprot:F1SV43
Length = 881
Score = 183 (69.5 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 58/218 (26%), Positives = 97/218 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY ID+ K + L ++ V Y D G +N +I ++ + D V TI
Sbjct: 426 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMIKELIDHKADLAVAPLTI 483
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSGCFF 447
R +DF+ P+ GVS++ + + + FL PL+ D+W+ S F
Sbjct: 484 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 543
Query: 448 IFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+ F W H N + + SFWF +++ E + L+ R + +
Sbjct: 544 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 603
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 604 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 641
Score = 155 (59.6 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 55/215 (25%), Positives = 99/215 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF +++ E + L+ R + +W F LI+I SYTA+L + LTV++++ I
Sbjct: 575 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 634
Query: 535 VNLL----------IKRGDNVGYQKGSFVLGILKQLGFDERK--LVVYNSHEECDELFQK 582
+ L +K G + + K S + K F K +V N+ E
Sbjct: 635 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTL-- 692
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+A+ + I Y + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 693 -TADYALLMESTTIEY---VTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQ 747
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGL 677
+ E DK+ +++ W++ S CP+ A +LG+
Sbjct: 748 LQEEDKLHIMKEKWWRG-SGCPEEENK-EASALGI 780
Score = 114 (45.2 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 60/269 (22%), Positives = 111/269 (41%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQ--IE 68
AI +++ WR A +Y D+ G + L A + R+ R + PL +DD +
Sbjct: 124 AILDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PLDSDDSRPLL 180
Query: 69 KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVT 128
KE+ + + R+ I ++ ++I ++A +G+M + +I T + LEP
Sbjct: 181 KEMKR--GREFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRY 236
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSAL 184
+ + G R + +W + LQ P L D + L YDA +
Sbjct: 237 SGVN-LTGFRILNVDNPHVSAIVEKWSMERLQAAPRAESGLLDGVMMTDAALLYDAVHIV 295
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VD 242
+V ++A ++ N+ + G + + + ++ GLTG +F
Sbjct: 296 SVCYQRA---------PQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTS 346
Query: 243 GQLQSSAFEIINVN-NGARGVGFWSPEKG 270
G +II++ +G VG WSP +G
Sbjct: 347 GLRTDFDLDIISLKEDGLEKVGVWSPAEG 375
>UNIPROTKB|J9NUD0 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 OMA:EEQAFRF EMBL:AAEX03009618
EMBL:AAEX03009619 EMBL:AAEX03009620 EMBL:AAEX03009621
EMBL:AAEX03009622 EMBL:AAEX03009623 EMBL:AAEX03009624
EMBL:AAEX03009625 Ensembl:ENSCAFT00000048003 Uniprot:J9NUD0
Length = 918
Score = 183 (69.5 bits), Expect = 8.1e-17, Sum P(2) = 8.1e-17
Identities = 58/218 (26%), Positives = 97/218 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY ID+ K + L ++ V Y D G +N +I ++ + D V TI
Sbjct: 518 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMIKELIDHKADLAVAPLTI 575
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSGCFF 447
R +DF+ P+ GVS++ + + + FL PL+ D+W+ S F
Sbjct: 576 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 635
Query: 448 IFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+ F W H N + + SFWF +++ E + L+ R + +
Sbjct: 636 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 695
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 696 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 733
Score = 118 (46.6 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 46/184 (25%), Positives = 81/184 (44%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF +++ E + L+ R + +W F LI+I SYTA+L + LTV++++ I
Sbjct: 667 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 726
Query: 535 VNLL----------IKRGDNVGYQKGSFVLGILKQLGFDERK--LVVYNSHEECDELFQK 582
+ L +K G + + K S + K F K +V N+ E
Sbjct: 727 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTL-- 784
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+A+ + I Y + ++C+ T + + G+G P+ SP ++ AIL+
Sbjct: 785 -TADYALLMESTTIEY---VTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILS 839
Query: 643 VTEG 646
G
Sbjct: 840 AAGG 843
Score = 114 (45.2 bits), Expect = 8.1e-17, Sum P(2) = 8.1e-17
Identities = 60/269 (22%), Positives = 111/269 (41%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQ--IE 68
AI +++ WR A +Y D+ G + L A + R+ R + PL +DD +
Sbjct: 216 AILDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PLDSDDSRPLL 272
Query: 69 KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVT 128
KE+ + + R+ I ++ ++I ++A +G+M + +I T + LEP
Sbjct: 273 KEMKR--GREFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRY 328
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSAL 184
+ + G R + +W + LQ P L D + L YDA +
Sbjct: 329 SGVN-LTGFRILNVDNPHVSAIVEKWSMERLQAAPRAESGLLDGVMMTDAALLYDAVHIV 387
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VD 242
+V ++A ++ N+ + G + + + ++ GLTG +F
Sbjct: 388 SVCYQRA---------PQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTS 438
Query: 243 GQLQSSAFEIINVN-NGARGVGFWSPEKG 270
G +II++ +G VG WSP +G
Sbjct: 439 GLRTDFDLDIISLKEDGLEKVGVWSPAEG 467
>UNIPROTKB|F1PWT6 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 CTD:2899 KO:K05203 EMBL:AAEX03009618
EMBL:AAEX03009619 EMBL:AAEX03009620 EMBL:AAEX03009621
EMBL:AAEX03009622 EMBL:AAEX03009623 EMBL:AAEX03009624
EMBL:AAEX03009625 RefSeq:XP_850331.3 Ensembl:ENSCAFT00000005371
GeneID:608269 KEGG:cfa:608269 Uniprot:F1PWT6
Length = 919
Score = 183 (69.5 bits), Expect = 8.2e-17, Sum P(2) = 8.2e-17
Identities = 58/218 (26%), Positives = 97/218 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY ID+ K + L ++ V Y D G +N +I ++ + D V TI
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMIKELIDHKADLAVAPLTI 521
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSGCFF 447
R +DF+ P+ GVS++ + + + FL PL+ D+W+ S F
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 448 IFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+ F W H N + + SFWF +++ E + L+ R + +
Sbjct: 582 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 642 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 679
Score = 155 (59.6 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 55/215 (25%), Positives = 99/215 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF +++ E + L+ R + +W F LI+I SYTA+L + LTV++++ I
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 535 VNLL----------IKRGDNVGYQKGSFVLGILKQLGFDERK--LVVYNSHEECDELFQK 582
+ L +K G + + K S + K F K +V N+ E
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTL-- 730
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+A+ + I Y + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 731 -TADYALLMESTTIEY---VTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQ 785
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGL 677
+ E DK+ +++ W++ S CP+ A +LG+
Sbjct: 786 LQEEDKLHIMKEKWWRG-SGCPEEENK-EASALGI 818
Score = 114 (45.2 bits), Expect = 8.2e-17, Sum P(2) = 8.2e-17
Identities = 60/269 (22%), Positives = 111/269 (41%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQ--IE 68
AI +++ WR A +Y D+ G + L A + R+ R + PL +DD +
Sbjct: 162 AILDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PLDSDDSRPLL 218
Query: 69 KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVT 128
KE+ + + R+ I ++ ++I ++A +G+M + +I T + LEP
Sbjct: 219 KEMKR--GREFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRY 274
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSAL 184
+ + G R + +W + LQ P L D + L YDA +
Sbjct: 275 SGVN-LTGFRILNVDNPHVSAIVEKWSMERLQAAPRAESGLLDGVMMTDAALLYDAVHIV 333
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VD 242
+V ++A ++ N+ + G + + + ++ GLTG +F
Sbjct: 334 SVCYQRA---------PQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTS 384
Query: 243 GQLQSSAFEIINVN-NGARGVGFWSPEKG 270
G +II++ +G VG WSP +G
Sbjct: 385 GLRTDFDLDIISLKEDGLEKVGVWSPAEG 413
>ZFIN|ZDB-GENE-020125-2 [details] [associations]
symbol:gria1b "glutamate receptor, ionotropic, AMPA
1b" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-020125-2 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
EMBL:BX890629 EMBL:CR749161 IPI:IPI00993241
ProteinModelPortal:F1QCH0 Ensembl:ENSDART00000129703 Bgee:F1QCH0
Uniprot:F1QCH0
Length = 930
Score = 145 (56.1 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 62/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 616 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 673
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V+ S+ + E +F K + G
Sbjct: 674 ESAEDLAKQTE-IAY--GTLDGGSTKEF-FRRSKIAVFEKMWSYMKSAEPTVFVKTTDEG 729
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ + YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 730 VVRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNPVNLA 789
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 790 VLKLNEQGLLDKLKNKWWYDKGECGSGG 817
Score = 125 (49.1 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 29/120 (24%), Positives = 57/120 (47%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y+ + V Y D + +N ++ ++ G+ D V TI
Sbjct: 436 GYCVELAAEIAKHVGYSYRLELVGDGKYGARDAETM-MWNGMVGELVYGKADVAVAPLTI 494
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGFVV 454
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 495 TLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 551
Score = 74 (31.1 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 56/264 (21%), Positives = 106/264 (40%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ A+++ + W + V +Y + G ++ + D A + S+ T+ K
Sbjct: 131 ALIALVEHYKWNKFVYMYSSDSEGLTVLQKILDT--AAEKTWQVTSINFDTLTEAAFLKA 188
Query: 71 LYKLFTMQTRVFILHM-LPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNL----LRTLE 124
+ L + IL L L S I + +E+ K +I+ + G +L R
Sbjct: 189 IQDLDNKKEFKIILDCELERLNS-ILQTLSELCNDLKNYHYILANLGFLDLNLTEFRKGG 247
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSAL 184
+VT Q + P V +T ++++ + + K L+ +P L G L YD + +
Sbjct: 248 ANVT-GFQLMNYTNPTVSRT--IQDW-LEFDSKDLK-SPK---RRLKYTGALTYDGVTVM 299
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-G 243
A A + + + Q G + +AL ++F GLTG F D G
Sbjct: 300 ATAFQNLRKQRIDISRRGNAGECLANPPAPWGQ-GIDIQRALQQVQFEGLTGHVQFNDKG 358
Query: 244 QLQSSAFEIINVN-NGARGVGFWS 266
+ ++ +G + VG+W+
Sbjct: 359 HRTNFTVSVMEFGPSGPKKVGYWN 382
Score = 50 (22.7 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 26 PIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQ 66
PI +NQ+ +L P L DAL A+ + + ++D +
Sbjct: 113 PIDTNNQFVIQLRPELQDALIALVEHYKWNKFVYMYSSDSE 153
Score = 45 (20.9 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 16/50 (32%), Positives = 20/50 (40%)
Query: 765 SSYSQHADSHFLFYGEQGTPRTESGNSNHNPN-SQAQAPPEIVSAVELTN 813
S Y HAD +Q + S N +PN SQ Q + E TN
Sbjct: 560 SPYEWHADDEEETADQQNQNQPPSPEPNQSPNQSQNQREEKQEKQPEHTN 609
>UNIPROTKB|F1P5Y1 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0032590 "dendrite
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0032281 GO:GO:0031623 GO:GO:0032590
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:ARIMQQW EMBL:AADN02028659 EMBL:AADN02028660
IPI:IPI00820450 ProteinModelPortal:F1P5Y1
Ensembl:ENSGALT00000040661 Uniprot:F1P5Y1
Length = 904
Score = 204 (76.9 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 73/255 (28%), Positives = 118/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y + V Y D + ++N ++ ++ G D V TI
Sbjct: 439 GYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTK-TWNGMVGELVYGRADVAVAPLTI 497
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 498 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 554
Query: 454 VWVLEHRVN------EDFR-G---PARHQVG-----TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F G PA Q S WFS F Q+ IS +L
Sbjct: 555 VLFLVSRFSPYEWHTEEFEEGRDQPANDQTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 612
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 613 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAG 669
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ V+
Sbjct: 670 STKEF-FRRSKIAVF 683
Score = 146 (56.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 64/222 (28%), Positives = 103/222 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 592 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 649
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V+ ++ + E +F + + G
Sbjct: 650 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 705
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
I + YA LL I Q TM V + G+G A P S L V+ A
Sbjct: 706 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLA 765
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSC--PDAGTVVSARSLGLNS 679
+L ++E + +++ W+ C D+G+ +L L++
Sbjct: 766 VLKLSEQGVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSN 807
Score = 90 (36.7 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 51/266 (19%), Positives = 113/266 (42%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ ++I+ + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 132 ALISVIEHYSWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRV 187
Query: 71 LYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L++ L + R+ ++ + I K ++ G +I+ + G ++ T
Sbjct: 188 LFQELQKKKERLVVVDCESERLNIILSKIIKLEKNGNGYHYILANMGFMDIDLT---KFR 244
Query: 129 DSMQGVIGVRPYVPKTKALE-NFRVRWKRKFLQENPSLF--DAELNIFGLLAYDATSALA 185
+S V G + V T + +W+ +E P + + L YD +A
Sbjct: 245 ESGANVTGFQ-LVNYTDTVPARIMQQWRNNDARELPRVDWKRPKATYTSALTYDGVRVMA 303
Query: 186 VAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQ 244
A + + + + A Q G + +AL +RF GL+G+ F + G+
Sbjct: 304 EAFQNLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLSGNVQFNEKGR 362
Query: 245 LQSSAFEIINV-NNGARGVGFWSPEK 269
+ +I + ++G R +G+W+ ++
Sbjct: 363 RTNYTLHVIEMKHDGIRKIGYWNEDE 388
Score = 44 (20.5 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 26 PIYVDNQYGEELIPSLTDALQAI 48
P+ NQ+ +L P L DAL ++
Sbjct: 114 PVETSNQFVLQLRPELQDALISV 136
Score = 39 (18.8 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 16 IKAFG-WRE---AVPIYVDNQYGEE 36
I+ G W E VP+ +D Q G E
Sbjct: 378 IRKIGYWNEDEKLVPVAIDTQTGNE 402
>RGD|71027 [details] [associations]
symbol:Grik3 "glutamate receptor, ionotropic, kainate 3"
species:10116 "Rattus norvegicus" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=IEA;ISO] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISO;IMP;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0005887
"integral to plasma membrane" evidence=IEA;ISO] [GO:0007196
"adenylate cyclase-inhibiting G-protein coupled glutamate receptor
signaling pathway" evidence=ISO] [GO:0007215 "glutamate receptor
signaling pathway" evidence=ISO] [GO:0007216 "G-protein coupled
glutamate receptor signaling pathway" evidence=ISO] [GO:0007268
"synaptic transmission" evidence=NAS] [GO:0008066 "glutamate
receptor activity" evidence=IDA] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=IEA;ISO] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0032839 "dendrite cytoplasm" evidence=IDA]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IMP;IDA] [GO:0042391 "regulation of membrane potential"
evidence=ISO;IDA] [GO:0043195 "terminal bouton" evidence=IDA]
[GO:0043204 "perikaryon" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051967 "negative regulation of synaptic
transmission, glutamatergic" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 EMBL:AF027331
Pfam:PF01094 RGD:71027 GO:GO:0005887 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0043195
GO:GO:0042391 GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 OrthoDB:EOG41C6VH CTD:2899 KO:K05203 GO:GO:0001640
EMBL:Z11716 EMBL:M83552 IPI:IPI00230977 IPI:IPI00231277 PIR:I53474
PIR:S19810 RefSeq:NP_001106187.1 RefSeq:NP_852038.2 UniGene:Rn.92477
PDB:3OLZ PDB:3S9E PDB:3U92 PDB:3U93 PDB:3U94 PDB:4E0W PDB:4G8N
PDBsum:3OLZ PDBsum:3S9E PDBsum:3U92 PDBsum:3U93 PDBsum:3U94
PDBsum:4E0W PDBsum:4G8N ProteinModelPortal:P42264 SMR:P42264
STRING:P42264 PRIDE:P42264 GeneID:298521 KEGG:rno:298521
UCSC:RGD:71027 InParanoid:P42264 BindingDB:P42264 ChEMBL:CHEMBL3744
NextBio:643848 ArrayExpress:P42264 Genevestigator:P42264
GermOnline:ENSRNOG00000008992 Uniprot:P42264
Length = 919
Score = 182 (69.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 57/218 (26%), Positives = 97/218 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY ID+ K + L ++ V Y D G +N ++ ++ + D V TI
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSGCFF 447
R +DF+ P+ GVS++ + + + FL PL+ D+W+ S F
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 448 IFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+ F W H N + + SFWF +++ E + L+ R + +
Sbjct: 582 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 642 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 679
Score = 156 (60.0 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 55/215 (25%), Positives = 99/215 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF +++ E + L+ R + +W F LI+I SYTA+L + LTV++++ I
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 535 VNLL----------IKRGDNVGYQKGSFVLGILKQLGFDERK--LVVYNSHEECDELFQK 582
+ L +K G + + K S + K F K +V N+ E
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTL-- 730
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+A+ + I Y + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 731 -TADYALLMESTTIEY---ITQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQ 785
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGL 677
+ E DK+ +++ W++ S CP+ A +LG+
Sbjct: 786 LQEEDKLHIMKEKWWRG-SGCPEEENK-EASALGI 818
Score = 113 (44.8 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 59/269 (21%), Positives = 112/269 (41%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQ--IE 68
AI ++++ WR A +Y D+ G + L A + R+ R + P+ +DD +
Sbjct: 162 AILDLVQSLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PIDSDDSRPLL 218
Query: 69 KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVT 128
KE+ + + R+ I ++ ++I ++A +G+M + +I T + LEP
Sbjct: 219 KEMKR--GREFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRY 274
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSAL 184
+ + G R + +W + LQ P L D + L YDA +
Sbjct: 275 SGVN-LTGFRILNVDNAHVSAIVEKWSMERLQAAPRAESGLLDGVMMTDAALLYDAVHIV 333
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VD 242
+V ++A + ++ N+ + G + + + ++ GLTG +F
Sbjct: 334 SVCYQRA---------SQMTVNSLQCHRHKPWRFGGRFMNFIKEAQWEGLTGRIVFNKTS 384
Query: 243 GQLQSSAFEIINVN-NGARGVGFWSPEKG 270
G +II++ +G VG WSP G
Sbjct: 385 GLRTDFDLDIISLKEDGLEKVGVWSPADG 413
Score = 39 (18.8 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 429 WVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHR 460
W L+ L W+ W +G F+ F W+ + R
Sbjct: 5 WRRLRSLVWEYW--AG--FLVCAF--WIPDSR 30
>UNIPROTKB|P42264 [details] [associations]
symbol:Grik3 "Glutamate receptor ionotropic, kainate 3"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 EMBL:AF027331
Pfam:PF01094 RGD:71027 GO:GO:0005887 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0043195
GO:GO:0042391 GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 OrthoDB:EOG41C6VH CTD:2899 KO:K05203 GO:GO:0001640
EMBL:Z11716 EMBL:M83552 IPI:IPI00230977 IPI:IPI00231277 PIR:I53474
PIR:S19810 RefSeq:NP_001106187.1 RefSeq:NP_852038.2
UniGene:Rn.92477 PDB:3OLZ PDB:3S9E PDB:3U92 PDB:3U93 PDB:3U94
PDB:4E0W PDB:4G8N PDBsum:3OLZ PDBsum:3S9E PDBsum:3U92 PDBsum:3U93
PDBsum:3U94 PDBsum:4E0W PDBsum:4G8N ProteinModelPortal:P42264
SMR:P42264 STRING:P42264 PRIDE:P42264 GeneID:298521 KEGG:rno:298521
UCSC:RGD:71027 InParanoid:P42264 BindingDB:P42264 ChEMBL:CHEMBL3744
NextBio:643848 ArrayExpress:P42264 Genevestigator:P42264
GermOnline:ENSRNOG00000008992 Uniprot:P42264
Length = 919
Score = 182 (69.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 57/218 (26%), Positives = 97/218 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY ID+ K + L ++ V Y D G +N ++ ++ + D V TI
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSGCFF 447
R +DF+ P+ GVS++ + + + FL PL+ D+W+ S F
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 448 IFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+ F W H N + + SFWF +++ E + L+ R + +
Sbjct: 582 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 642 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 679
Score = 156 (60.0 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 55/215 (25%), Positives = 99/215 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF +++ E + L+ R + +W F LI+I SYTA+L + LTV++++ I
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 535 VNLL----------IKRGDNVGYQKGSFVLGILKQLGFDERK--LVVYNSHEECDELFQK 582
+ L +K G + + K S + K F K +V N+ E
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTL-- 730
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+A+ + I Y + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 731 -TADYALLMESTTIEY---ITQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQ 785
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGL 677
+ E DK+ +++ W++ S CP+ A +LG+
Sbjct: 786 LQEEDKLHIMKEKWWRG-SGCPEEENK-EASALGI 818
Score = 113 (44.8 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 59/269 (21%), Positives = 112/269 (41%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQ--IE 68
AI ++++ WR A +Y D+ G + L A + R+ R + P+ +DD +
Sbjct: 162 AILDLVQSLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PIDSDDSRPLL 218
Query: 69 KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVT 128
KE+ + + R+ I ++ ++I ++A +G+M + +I T + LEP
Sbjct: 219 KEMKR--GREFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRY 274
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSAL 184
+ + G R + +W + LQ P L D + L YDA +
Sbjct: 275 SGVN-LTGFRILNVDNAHVSAIVEKWSMERLQAAPRAESGLLDGVMMTDAALLYDAVHIV 333
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VD 242
+V ++A + ++ N+ + G + + + ++ GLTG +F
Sbjct: 334 SVCYQRA---------SQMTVNSLQCHRHKPWRFGGRFMNFIKEAQWEGLTGRIVFNKTS 384
Query: 243 GQLQSSAFEIINVN-NGARGVGFWSPEKG 270
G +II++ +G VG WSP G
Sbjct: 385 GLRTDFDLDIISLKEDGLEKVGVWSPADG 413
Score = 39 (18.8 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 429 WVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHR 460
W L+ L W+ W +G F+ F W+ + R
Sbjct: 5 WRRLRSLVWEYW--AG--FLVCAF--WIPDSR 30
>UNIPROTKB|Q38PU3 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9541 "Macaca fascicularis" [GO:0030424 "axon" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0030424 GO:GO:0043197 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839 EMBL:DQ159934
HSSP:P22756 ProteinModelPortal:Q38PU3 SMR:Q38PU3 Uniprot:Q38PU3
Length = 908
Score = 188 (71.2 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 77/341 (22%), Positives = 137/341 (40%)
Query: 219 GPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGFWSPEKGXXXXX 275
G + + + + GLTG F +G ++I++ G +G W P G
Sbjct: 356 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTE 415
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P + T + + L V +++ + F K + P
Sbjct: 416 SQKGK----------PANITDS-------LSNRSLIVTTILEEPYVLFKK-SDKPLYGND 457
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
GY ID+ + + L + V Y D ++G +N ++ ++ + D V
Sbjct: 458 RFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD-ANGQWNGMVRELIDHKADLAVAP 516
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF- 449
I + R +DF+ P+ G+S++ + + FL PL+ D+W V C +
Sbjct: 517 LAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSC 576
Query: 450 IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFV 500
+ FV+ W H N D + + SFWF ++ E + L+ R V
Sbjct: 577 VLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMRQGSELMPKALSTRIV 636
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
+W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 637 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 677
Score = 146 (56.5 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 66/270 (24%), Positives = 119/270 (44%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 559 LSPDIW-MYVLLACLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 617
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 618 ALMRQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 677
Query: 542 ----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSHEECDELFQKGSANGGI 589
G + + K S + K F R+ V+ S+EE Q+ +
Sbjct: 678 TKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEG---IQRVLTSD-- 732
Query: 590 AAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKM 649
A E + + ++C+ T + + G+G P+ SP ++ AIL + E K+
Sbjct: 733 YAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKL 791
Query: 650 KEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ + A +LG+ +
Sbjct: 792 HMMKEKWWRGNG-CPEEESK-EASALGVQN 819
Score = 106 (42.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 61/273 (22%), Positives = 108/273 (39%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDD 65
SS AI +++ F W+ +Y D+ G LI L + ++A +R R I L D
Sbjct: 154 SSLSRAILDLVQFFKWKTVTVVY-DDSTG--LI-RLQELIKA-PSRYNLRLKIRQLPADT 208
Query: 66 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
+ K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 209 KDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 267
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPS----LFDAELNIFGLLAYDA 180
P + + G R + + + +W + LQ P L D + L YDA
Sbjct: 268 PYRYSGVN-MTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDA 326
Query: 181 TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
++VAV++ F + VSS + G + + + + GLTG F
Sbjct: 327 VHVVSVAVQQ-------FPQMTVSS--LQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 241 --VDGQLQSSAFEIINVNN-GARGVGFWSPEKG 270
+G ++I++ G +G W P G
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASG 410
>UNIPROTKB|F1P0L4 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0001640
"adenylate cyclase inhibiting G-protein coupled glutamate receptor
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GeneTree:ENSGT00590000083056
OMA:EEQAFRF GO:GO:0001640 EMBL:AADN02043882 EMBL:AADN02043883
IPI:IPI00577160 ProteinModelPortal:F1P0L4
Ensembl:ENSGALT00000003274 Uniprot:F1P0L4
Length = 891
Score = 181 (68.8 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 60/218 (27%), Positives = 97/218 (44%)
Query: 339 GYSIDVFK--AVIEELPYAVAY-DFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY ID+ K AVI Y + + Y D G +N +I ++ + D V TI
Sbjct: 436 GYCIDLLKELAVILGFTYEIRLVEDGKYGAQD--DKGQWNGMIKELIDHKADLAVAPLTI 493
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSGCFF 447
R +DF+ P+ GVS++ + + + FL PL+ D+W+ S F
Sbjct: 494 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYILLAYLGVSCVLF 553
Query: 448 IFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+ F W H N + + SFWF ++ E + L+ R + +
Sbjct: 554 VIARFSPYEWYDAHPCNPGSDIVENNFTLFNSFWFGMGALMQQGSELMPKALSTRIIGGI 613
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 614 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 651
Score = 154 (59.3 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 55/217 (25%), Positives = 99/217 (45%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF ++ E + L+ R + +W F LI+I SYTA+L + LTV++++ I
Sbjct: 585 SFWFGMGALMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 644
Query: 535 VNLL----------IKRGDNVGYQKGSFVLGILKQLGFDERK--LVVYNSHEECDELFQK 582
+ L +K G + + K S + K F K +V N+ E
Sbjct: 645 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPTALVKNNEEGIQRTL-- 702
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+A+ + I Y + ++C+ T V + G+G P+ SP ++ AIL
Sbjct: 703 -TADYALLMESTTIEY---ITQRNCN-LTQVGGLIDSKGYGIGTPMGSPYRDKITIAILQ 757
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ E DK+ +++ W++ + CP+ A +LG+ +
Sbjct: 758 LQEEDKLHVMKEKWWRGNG-CPEDENK-EASALGIQN 792
Score = 113 (44.8 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 60/269 (22%), Positives = 110/269 (40%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQ--IE 68
AI +++ WR A +Y D+ G + L A + R+ R + PL TDD +
Sbjct: 134 AILDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PLDTDDARPLL 190
Query: 69 KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVT 128
KE+ + + R+ I + ++I +A +G+M + +I T + LEP
Sbjct: 191 KEMKR--GREFRI-IFDCSHLMAAQILRQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRY 246
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPS----LFDAELNIFGLLAYDATSAL 184
+ + G R + + + +W + LQ P L D + L YDA +
Sbjct: 247 SGVN-LTGFRILNVENPHVSSIIEKWAMERLQSAPKAELGLLDGVMMTDAALLYDAVHVV 305
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VD 242
+V ++A ++ N+ + G + + + ++ GLTG +F
Sbjct: 306 SVCYQRA---------PQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKSS 356
Query: 243 GQLQSSAFEIINVN-NGARGVGFWSPEKG 270
G +II++ +G VG W+P G
Sbjct: 357 GLRTDFDLDIISLKEDGLEKVGTWNPSNG 385
>MGI|MGI:95816 [details] [associations]
symbol:Grik3 "glutamate receptor, ionotropic, kainate 3"
species:10090 "Mus musculus" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=ISO] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0007196 "adenylate
cyclase-inhibiting G-protein coupled glutamate receptor signaling
pathway" evidence=ISO] [GO:0007215 "glutamate receptor signaling
pathway" evidence=ISO] [GO:0007216 "G-protein coupled glutamate
receptor signaling pathway" evidence=ISO] [GO:0008066 "glutamate
receptor activity" evidence=ISO] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0032839
"dendrite cytoplasm" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043204 "perikaryon"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0051967 "negative
regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95816 GO:GO:0005886
GO:GO:0005887 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0043195 GO:GO:0042391 GO:GO:0032839
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
OrthoDB:EOG41C6VH GeneTree:ENSGT00590000083056 CTD:2899 KO:K05203
OMA:EEQAFRF GO:GO:0001640 EMBL:AL607090 EMBL:AL627328 EMBL:BC118004
EMBL:AF245444 IPI:IPI00120318 IPI:IPI00986627 RefSeq:NP_001074566.1
UniGene:Mm.40896 ProteinModelPortal:B1AS29 SMR:B1AS29 STRING:B1AS29
PaxDb:B1AS29 PRIDE:B1AS29 DNASU:14807 Ensembl:ENSMUST00000030676
GeneID:14807 KEGG:mmu:14807 UCSC:uc008usa.2 InParanoid:B1AS29
ChiTaRS:GRIK3 NextBio:286987 Bgee:B1AS29 Genevestigator:B1AS29
Uniprot:B1AS29
Length = 919
Score = 182 (69.1 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 57/218 (26%), Positives = 97/218 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY ID+ K + L ++ V Y D G +N ++ ++ + D V TI
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSGCFF 447
R +DF+ P+ GVS++ + + + FL PL+ D+W+ S F
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 448 IFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+ F W H N + + SFWF +++ E + L+ R + +
Sbjct: 582 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 642 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 679
Score = 156 (60.0 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 55/215 (25%), Positives = 99/215 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF +++ E + L+ R + +W F LI+I SYTA+L + LTV++++ I
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 535 VNLL----------IKRGDNVGYQKGSFVLGILKQLGFDERK--LVVYNSHEECDELFQK 582
+ L +K G + + K S + K F K +V N+ E
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTL-- 730
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+A+ + I Y + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 731 -TADYALLMESTTIEY---ITQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQ 785
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGL 677
+ E DK+ +++ W++ S CP+ A +LG+
Sbjct: 786 LQEEDKLHIMKEKWWRG-SGCPEEENK-EASALGI 818
Score = 112 (44.5 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 59/269 (21%), Positives = 111/269 (41%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQ--IE 68
AI ++++ WR A +Y D+ G + L A + R+ R + P+ +DD +
Sbjct: 162 AILDLVQSLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PIDSDDSRPLL 218
Query: 69 KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVT 128
KE+ + + R+ I ++ ++I ++A +G+M + +I T + LEP
Sbjct: 219 KEMKR--GREFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRY 274
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSAL 184
+ + G R + +W + LQ P L D + L YDA +
Sbjct: 275 SGVN-LTGFRILNVDNPHVSAIVEKWAMERLQAAPRAESGLLDGVMMTDAALLYDAVHIV 333
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VD 242
+V ++A ++ N+ + G + + + ++ GLTG +F
Sbjct: 334 SVCYQRA---------PQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTS 384
Query: 243 GQLQSSAFEIINVN-NGARGVGFWSPEKG 270
G +II++ +G VG WSP G
Sbjct: 385 GLRTDFDLDIISLKEDGLEKVGVWSPADG 413
Score = 39 (18.8 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 429 WVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHR 460
W L+ L W+ W +G F+ F W+ + R
Sbjct: 5 WRRLRSLVWEYW--AG--FLVCAF--WIPDSR 30
>UNIPROTKB|A2AVK2 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:AL929554 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882 Pfam:PF10562
HOVERGEN:HBG052638 UniGene:Hs.558334 HGNC:HGNC:4584 ChiTaRS:GRIN1
IPI:IPI00789973 SMR:A2AVK2 Ensembl:ENST00000350902 UCSC:uc004cli.1
Uniprot:A2AVK2
Length = 909
Score = 209 (78.6 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 73/313 (23%), Positives = 142/313 (45%)
Query: 367 DGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR 426
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 491 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPRS 549
Query: 427 NAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFWF 479
F+QP LW+ G + ++++L+ +VN + + ++ WF
Sbjct: 550 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 609
Query: 480 SFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN- 536
S+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 610 SWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIND 669
Query: 537 -LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGIA 590
L D Y ++ S + +Q+ R + +N +E E Q N A
Sbjct: 670 PRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLHA 728
Query: 591 AAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMK 650
+D + Q C T E F++ GFG SP +VS +IL E M+
Sbjct: 729 FIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENGFME 786
Query: 651 EIEDAWFKKHSSC 663
+++ W + + C
Sbjct: 787 DLDKTWVR-YQEC 798
Score = 78 (32.5 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 215 ISQNGPKLLQALSSIRFR-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWSPEKGX 271
I + GP + L S ++ G+TG F DG + + + I+N+ N VG ++
Sbjct: 314 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN----- 368
Query: 272 XXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPK 331
R IIWPG T P+G+++ T +L++ ++ F +VK T+
Sbjct: 369 ------GTHVIPNDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDG 418
Query: 332 T--QETSVVGYSIDVFKAVI 349
T +E +V G D K VI
Sbjct: 419 TCKEEFTVNG---DPVKKVI 435
Score = 51 (23.0 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 16/98 (16%), Positives = 39/98 (39%)
Query: 15 IIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKL 74
+++ + W + + D+ G L L+ +++ P T + + L +
Sbjct: 154 MMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQFDP-GTKN-VTALLMEA 211
Query: 75 FTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 212 KELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLV 249
>UNIPROTKB|Q05586 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IDA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IDA] [GO:0016594 "glycine binding"
evidence=IMP;IDA] [GO:0016595 "glutamate binding" evidence=IDA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0030425
"dendrite" evidence=IDA] [GO:0045471 "response to ethanol"
evidence=IDA] [GO:0006812 "cation transport" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042391 "regulation
of membrane potential" evidence=IDA] [GO:0005262 "calcium channel
activity" evidence=IDA] [GO:0005509 "calcium ion binding"
evidence=ISS] [GO:0005516 "calmodulin binding" evidence=ISS]
[GO:0008021 "synaptic vesicle" evidence=ISS] [GO:0008542 "visual
learning" evidence=ISS] [GO:0014069 "postsynaptic density"
evidence=ISS] [GO:0043005 "neuron projection" evidence=ISS]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISS] [GO:0045202 "synapse" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0055074 "calcium ion homeostasis" evidence=ISS]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0009986 "cell surface" evidence=ISS] [GO:0018964 "propylene
metabolic process" evidence=ISS] [GO:2000463 "positive regulation
of excitatory postsynaptic membrane potential" evidence=ISS]
[GO:0043083 "synaptic cleft" evidence=ISS] [GO:0042165
"neurotransmitter binding" evidence=ISS] [GO:0043195 "terminal
bouton" evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0060076 "excitatory synapse" evidence=ISS] [GO:0070588 "calcium
ion transmembrane transport" evidence=IDA] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0045471 GO:GO:0030054 GO:GO:0045211
GO:GO:0008021 GO:GO:0045944 GO:GO:0035235 GO:GO:0008542
GO:GO:0005509 GO:GO:0043195 DrugBank:DB00142 GO:GO:0030288
GO:GO:0005516 GO:GO:0043083 EMBL:AL929554 InterPro:IPR001828
GO:GO:0070588 GO:GO:0055074 GO:GO:0060076 Orphanet:178469 PDB:3BYA
PDBsum:3BYA DrugBank:DB01173 GO:GO:0016595 GO:GO:2000463
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
eggNOG:NOG282132 GO:GO:0016594 KO:K05208 InterPro:IPR018882
Pfam:PF10562 TCDB:1.A.10.1.6 CTD:2902 HOVERGEN:HBG052638
OrthoDB:EOG4CG07J EMBL:L13266 EMBL:L13267 EMBL:L13268 EMBL:D13515
EMBL:L05666 EMBL:AF015730 EMBL:AF015731 EMBL:Z32772 EMBL:Z32773
EMBL:Z32774 EMBL:U08106 EMBL:U08107 EMBL:S57708 IPI:IPI00011989
IPI:IPI00013915 IPI:IPI00335571 IPI:IPI00465228 IPI:IPI00470730
IPI:IPI00470731 IPI:IPI00646891 PIR:A46612 PIR:A47551
RefSeq:NP_000823.4 RefSeq:NP_001172019.1 RefSeq:NP_001172020.1
RefSeq:NP_015566.1 RefSeq:NP_067544.1 UniGene:Hs.558334 PDB:2NR1
PDBsum:2NR1 ProteinModelPortal:Q05586 SMR:Q05586 IntAct:Q05586
MINT:MINT-1900224 STRING:Q05586 PhosphoSite:Q05586 DMDM:548377
PaxDb:Q05586 PRIDE:Q05586 Ensembl:ENST00000315048
Ensembl:ENST00000371546 Ensembl:ENST00000371550
Ensembl:ENST00000371553 Ensembl:ENST00000371559
Ensembl:ENST00000371560 Ensembl:ENST00000371561 GeneID:2902
KEGG:hsa:2902 UCSC:uc004clk.3 UCSC:uc004cll.3 UCSC:uc004clm.3
GeneCards:GC09P140032 HGNC:HGNC:4584 HPA:CAB006831 MIM:138249
MIM:614254 neXtProt:NX_Q05586 PharmGKB:PA28978 OMA:VYRSAAM
PhylomeDB:Q05586 BindingDB:Q05586 ChEMBL:CHEMBL2015 ChiTaRS:GRIN1
EvolutionaryTrace:Q05586 GenomeRNAi:2902 NextBio:11487
PMAP-CutDB:Q5VSF3 ArrayExpress:Q05586 Bgee:Q05586 CleanEx:HS_GRIN1
Genevestigator:Q05586 GermOnline:ENSG00000176884 GO:GO:0018964
Uniprot:Q05586
Length = 938
Score = 209 (78.6 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 73/313 (23%), Positives = 142/313 (45%)
Query: 367 DGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR 426
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 491 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPRS 549
Query: 427 NAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFWF 479
F+QP LW+ G + ++++L+ +VN + + ++ WF
Sbjct: 550 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 609
Query: 480 SFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN- 536
S+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 610 SWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIND 669
Query: 537 -LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGIA 590
L D Y ++ S + +Q+ R + +N +E E Q N A
Sbjct: 670 PRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLHA 728
Query: 591 AAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMK 650
+D + Q C T E F++ GFG SP +VS +IL E M+
Sbjct: 729 FIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENGFME 786
Query: 651 EIEDAWFKKHSSC 663
+++ W + + C
Sbjct: 787 DLDKTWVR-YQEC 798
Score = 78 (32.5 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 215 ISQNGPKLLQALSSIRFR-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWSPEKGX 271
I + GP + L S ++ G+TG F DG + + + I+N+ N VG ++
Sbjct: 314 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN----- 368
Query: 272 XXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPK 331
R IIWPG T P+G+++ T +L++ ++ F +VK T+
Sbjct: 369 ------GTHVIPNDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDG 418
Query: 332 T--QETSVVGYSIDVFKAVI 349
T +E +V G D K VI
Sbjct: 419 TCKEEFTVNG---DPVKKVI 435
Score = 51 (23.0 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 16/98 (16%), Positives = 39/98 (39%)
Query: 15 IIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKL 74
+++ + W + + D+ G L L+ +++ P T + + L +
Sbjct: 154 MMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQFDP-GTKN-VTALLMEA 211
Query: 75 FTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 212 KELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLV 249
>UNIPROTKB|A9Z1Z8 [details] [associations]
symbol:GRIK3 "Glutamate receptor, ionotropic, kainate 3,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CH471059 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371
HOVERGEN:HBG051839 HSSP:P19491 EMBL:AL355386 EMBL:AC117945
RefSeq:NP_000822.2 UniGene:Hs.128848 DNASU:2899 GeneID:2899
KEGG:hsa:2899 CTD:2899 HGNC:HGNC:4581 PharmGKB:PA28975 KO:K05203
GenomeRNAi:2899 NextBio:11475 EMBL:AL591883 EMBL:AJ249210
IPI:IPI00646850 SMR:A9Z1Z8 STRING:A9Z1Z8 Ensembl:ENST00000373093
UCSC:uc001cba.1 Uniprot:A9Z1Z8
Length = 872
Score = 182 (69.1 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 57/218 (26%), Positives = 97/218 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY ID+ K + L ++ V Y D G +N ++ ++ + D V TI
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSGCFF 447
R +DF+ P+ GVS++ + + + FL PL+ D+W+ S F
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 448 IFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+ F W H N + + SFWF +++ E + L+ R + +
Sbjct: 582 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 642 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 679
Score = 155 (59.6 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 55/212 (25%), Positives = 95/212 (44%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF +++ E + L+ R + +W F LI+I SYTA+L + LTV++++ I
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 535 VNLLIKRGD-NVGYQKGSFVLGILKQLGFDE-RKLVVYNSHEECDELFQKGSANGGIAAA 592
+ L K+ G K + K+ K+ + S + K + G I A
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKP--SALVKNNEEG-IQRA 729
Query: 593 FDEIPYAKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTE 645
YA L+ + Q T + + G+G P+ SP ++ AIL + E
Sbjct: 730 LTA-DYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQE 788
Query: 646 GDKMKEIEDAWFKKHSSCPDAGTVVSARSLGL 677
DK+ +++ W++ S CP+ A +LG+
Sbjct: 789 EDKLHIMKEKWWRG-SGCPEEENK-EASALGI 818
Score = 110 (43.8 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 59/269 (21%), Positives = 110/269 (40%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQ--IE 68
AI +++ WR A +Y D+ G + L A + R+ R + P+ +DD +
Sbjct: 162 AILDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PIDSDDSRPLL 218
Query: 69 KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVT 128
KE+ + + R+ I ++ ++I ++A +G+M + +I T + LEP
Sbjct: 219 KEMKR--GREFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRY 274
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSAL 184
+ + G R + +W + LQ P L D + L YDA +
Sbjct: 275 SGVN-LTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDGVMMTDAALLYDAVHIV 333
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VD 242
+V ++A ++ N+ + G + + + ++ GLTG +F
Sbjct: 334 SVCYQRA---------PQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTS 384
Query: 243 GQLQSSAFEIINVN-NGARGVGFWSPEKG 270
G +II++ +G VG WSP G
Sbjct: 385 GLRTDFDLDIISLKEDGLEKVGVWSPADG 413
>MGI|MGI:95819 [details] [associations]
symbol:Grin1 "glutamate receptor, ionotropic, NMDA1 (zeta 1)"
species:10090 "Mus musculus" [GO:0001661 "conditioned taste
aversion" evidence=IMP] [GO:0001964 "startle response"
evidence=IMP] [GO:0001967 "suckling behavior" evidence=IMP]
[GO:0001975 "response to amphetamine" evidence=IGI;IMP] [GO:0004872
"receptor activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISO] [GO:0004972 "N-methyl-D-aspartate
selective glutamate receptor activity" evidence=ISO;IGI;IMP;IDA]
[GO:0005102 "receptor binding" evidence=IPI] [GO:0005215
"transporter activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005261 "cation channel
activity" evidence=IGI] [GO:0005262 "calcium channel activity"
evidence=IGI;IDA] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006812
"cation transport" evidence=ISO;IGI] [GO:0006816 "calcium ion
transport" evidence=IMP;IDA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IMP] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0007585 "respiratory gaseous exchange"
evidence=IMP] [GO:0007611 "learning or memory" evidence=IMP]
[GO:0007612 "learning" evidence=IMP] [GO:0007613 "memory"
evidence=IMP] [GO:0007616 "long-term memory" evidence=IMP]
[GO:0008021 "synaptic vesicle" evidence=IDA] [GO:0008306
"associative learning" evidence=IMP] [GO:0008344 "adult locomotory
behavior" evidence=IMP] [GO:0008355 "olfactory learning"
evidence=IMP] [GO:0008542 "visual learning" evidence=IGI;IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010646 "regulation of
cell communication" evidence=IMP] [GO:0010942 "positive regulation
of cell death" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=IC;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=ISO;IMP] [GO:0016595 "glutamate binding"
evidence=ISO] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=ISO;IPI] [GO:0018964 "propylene
metabolic process" evidence=IDA] [GO:0019233 "sensory perception of
pain" evidence=IMP] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021586 "pons maturation" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0022843 "voltage-gated cation
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0030426 "growth cone" evidence=NAS] [GO:0032590 "dendrite
membrane" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IGI;IDA] [GO:0035176 "social behavior" evidence=IMP]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IGI;IDA;IMP] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0035254 "glutamate receptor
binding" evidence=ISO] [GO:0042165 "neurotransmitter binding"
evidence=ISO] [GO:0042391 "regulation of membrane potential"
evidence=ISO;IMP;IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IGI] [GO:0043083 "synaptic cleft" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=ISO] [GO:0043197 "dendritic
spine" evidence=ISO;IDA] [GO:0043278 "response to morphine"
evidence=IMP] [GO:0043523 "regulation of neuron apoptotic process"
evidence=IGI;IMP] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IGI;IMP] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IMP] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045471 "response to ethanol" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] [GO:0048167 "regulation of synaptic plasticity"
evidence=IMP] [GO:0048168 "regulation of neuronal synaptic
plasticity" evidence=IMP] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048511 "rhythmic
process" evidence=ISO] [GO:0048814 "regulation of dendrite
morphogenesis" evidence=IMP] [GO:0050770 "regulation of
axonogenesis" evidence=IMP] [GO:0050905 "neuromuscular process"
evidence=IMP] [GO:0051262 "protein tetramerization" evidence=ISO]
[GO:0051963 "regulation of synapse assembly" evidence=IMP]
[GO:0055074 "calcium ion homeostasis" evidence=IDA] [GO:0060076
"excitatory synapse" evidence=ISO] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IGI;IMP]
[GO:0060134 "prepulse inhibition" evidence=IMP] [GO:0060179 "male
mating behavior" evidence=IMP] [GO:0070588 "calcium ion
transmembrane transport" evidence=ISO;IGI;IDA] [GO:2000463
"positive regulation of excitatory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95819 GO:GO:0021987 GO:GO:0008355 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0019233 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0008021 GO:GO:0045944
GO:GO:0008344 GO:GO:0001967 GO:GO:0008542 GO:GO:0007616
GO:GO:0005509 GO:GO:0060079 GO:GO:0001975 GO:GO:0043524
GO:GO:0060134 GO:GO:0035249 GO:GO:0030288 GO:GO:0030426
GO:GO:0043065 GO:GO:0005516 GO:GO:0050770 GO:GO:0048814
GO:GO:0007585 GO:GO:0006874 GO:GO:0001661 GO:GO:0051963
GO:GO:0035176 EMBL:AL732309 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GeneTree:ENSGT00700000104113 GO:GO:0060179
GO:GO:0004972 KO:K05208 InterPro:IPR018882 Pfam:PF10562 CTD:2902
HOGENOM:HOG000231491 HOVERGEN:HBG052638 GO:GO:0018964 EMBL:D10028
EMBL:BC039157 IPI:IPI00118385 IPI:IPI00608056 PIR:S21104
RefSeq:NP_001171127.1 RefSeq:NP_001171128.1 RefSeq:NP_032195.1
UniGene:Mm.278672 ProteinModelPortal:P35438 SMR:P35438
DIP:DIP-31577N IntAct:P35438 MINT:MINT-135802 STRING:P35438
PhosphoSite:P35438 PaxDb:P35438 PRIDE:P35438
Ensembl:ENSMUST00000028335 Ensembl:ENSMUST00000114312 GeneID:14810
KEGG:mmu:14810 UCSC:uc008iri.2 UCSC:uc008irk.2 BindingDB:P35438
ChEMBL:CHEMBL2895 NextBio:286995 Bgee:P35438 CleanEx:MM_GRIN1
Genevestigator:P35438 GermOnline:ENSMUSG00000026959 GO:GO:0021586
Uniprot:P35438
Length = 938
Score = 209 (78.6 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 73/313 (23%), Positives = 142/313 (45%)
Query: 367 DGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR 426
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 491 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPRS 549
Query: 427 NAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFWF 479
F+QP LW+ G + ++++L+ +VN + + ++ WF
Sbjct: 550 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 609
Query: 480 SFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN- 536
S+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 610 SWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIND 669
Query: 537 -LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGIA 590
L D Y ++ S + +Q+ R + +N +E E Q N A
Sbjct: 670 PRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLHA 728
Query: 591 AAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMK 650
+D + Q C T E F++ GFG SP +VS +IL E M+
Sbjct: 729 FIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENGFME 786
Query: 651 EIEDAWFKKHSSC 663
+++ W + + C
Sbjct: 787 DLDKTWVR-YQEC 798
Score = 77 (32.2 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 215 ISQNGPKLLQALSSIRFR-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWSPEKGX 271
I + GP + L S ++ G+TG F DG + + + I+N+ N VG ++
Sbjct: 314 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN----- 368
Query: 272 XXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPK 331
R IIWPG T P+G+++ T +L++ ++ F +VK T+
Sbjct: 369 ------GTHVIPNDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTMSDG 418
Query: 332 T--QETSVVGYSIDVFKAVI 349
T +E +V G D K VI
Sbjct: 419 TCKEEFTVNG---DPVKKVI 435
Score = 51 (23.0 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 16/98 (16%), Positives = 39/98 (39%)
Query: 15 IIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKL 74
+++ + W + + D+ G L L+ +++ P T + + L +
Sbjct: 154 MMRVYNWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQFDP-GTKN-VTALLMEA 211
Query: 75 FTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 212 RDLEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLV 249
>RGD|2736 [details] [associations]
symbol:Grin1 "glutamate receptor, ionotropic, N-methyl D-aspartate
1" species:10116 "Rattus norvegicus" [GO:0001661 "conditioned taste
aversion" evidence=IEA;ISO] [GO:0001964 "startle response"
evidence=ISO] [GO:0001967 "suckling behavior" evidence=IEA;ISO]
[GO:0001975 "response to amphetamine" evidence=IEA;ISO] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IDA;TAS]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IGI;IMP;IDA;TAS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel activity"
evidence=ISO] [GO:0005262 "calcium channel activity"
evidence=IEA;ISO] [GO:0005509 "calcium ion binding" evidence=IEA;ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005887 "integral to plasma membrane" evidence=ISO] [GO:0006812
"cation transport" evidence=ISO] [GO:0006816 "calcium ion transport"
evidence=ISO] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA;ISO] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA;ISO] [GO:0007611 "learning or memory" evidence=ISO;TAS]
[GO:0007612 "learning" evidence=ISO] [GO:0007613 "memory"
evidence=ISO] [GO:0007616 "long-term memory" evidence=IEA;ISO]
[GO:0008021 "synaptic vesicle" evidence=IEA;ISO] [GO:0008306
"associative learning" evidence=ISO] [GO:0008344 "adult locomotory
behavior" evidence=IEA;ISO] [GO:0008355 "olfactory learning"
evidence=IEA;ISO] [GO:0008542 "visual learning" evidence=IEA;ISO]
[GO:0009986 "cell surface" evidence=IEA;ISO] [GO:0010646 "regulation
of cell communication" evidence=ISO] [GO:0010942 "positive regulation
of cell death" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=ISO;IDA] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0014075 "response to amine stimulus" evidence=IEP]
[GO:0016020 "membrane" evidence=ISO] [GO:0016594 "glycine binding"
evidence=ISO;IDA] [GO:0016595 "glutamate binding" evidence=ISO;IDA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISO;IDA;TAS] [GO:0018964 "propylene metabolic
process" evidence=IEA;ISO] [GO:0019233 "sensory perception of pain"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0021586 "pons maturation" evidence=IEA;ISO] [GO:0021987 "cerebral
cortex development" evidence=IEA;ISO] [GO:0022843 "voltage-gated
cation channel activity" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO] [GO:0032590
"dendrite membrane" evidence=IDA] [GO:0034220 "ion transmembrane
transport" evidence=ISO] [GO:0035176 "social behavior"
evidence=IEA;ISO] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IDA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA;ISO] [GO:0035254 "glutamate
receptor binding" evidence=IPI] [GO:0042165 "neurotransmitter
binding" evidence=IDA] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043083 "synaptic cleft" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=ISO;IDA] [GO:0043278 "response to morphine"
evidence=IEA;ISO] [GO:0043523 "regulation of neuron apoptotic
process" evidence=ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IEA;ISO] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0045471 "response to ethanol" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IDA] [GO:0048167 "regulation of
synaptic plasticity" evidence=ISO] [GO:0048168 "regulation of
neuronal synaptic plasticity" evidence=ISO] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=IEA;ISO]
[GO:0048511 "rhythmic process" evidence=IDA] [GO:0048814 "regulation
of dendrite morphogenesis" evidence=IEA;ISO] [GO:0050770 "regulation
of axonogenesis" evidence=IEA;ISO] [GO:0050905 "neuromuscular
process" evidence=ISO] [GO:0051262 "protein tetramerization"
evidence=IDA] [GO:0051592 "response to calcium ion" evidence=IEP]
[GO:0051963 "regulation of synapse assembly" evidence=IEA;ISO]
[GO:0055074 "calcium ion homeostasis" evidence=ISO] [GO:0060076
"excitatory synapse" evidence=IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060134
"prepulse inhibition" evidence=IEA;ISO] [GO:0060179 "male mating
behavior" evidence=IEA;ISO] [GO:0060992 "response to fungicide"
evidence=IEP] [GO:0070588 "calcium ion transmembrane transport"
evidence=ISO] [GO:0071287 "cellular response to manganese ion"
evidence=IEP] [GO:2000463 "positive regulation of excitatory
postsynaptic membrane potential" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060
Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2736 GO:GO:0014069 GO:GO:0051592 GO:GO:0060992 GO:GO:0030054
GO:GO:0045211 GO:GO:0043195 GO:GO:0048511 GO:GO:0030288 GO:GO:0007611
GO:GO:0014070 GO:GO:0043083 GO:GO:0010942 GO:GO:0032590
InterPro:IPR001828 GO:GO:0014075 GO:GO:0060076 GO:GO:0016595
GO:GO:2000463 GO:GO:0071287 GO:GO:0017146 GO:GO:0042165 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GeneTree:ENSGT00700000104113
GO:GO:0022843 GO:GO:0004972 KO:K05208 InterPro:IPR018882 Pfam:PF10562
PDB:2A5T PDBsum:2A5T CTD:2902 HOGENOM:HOG000231491 HOVERGEN:HBG052638
OMA:VYRSAAM EMBL:X63255 EMBL:AY157515 EMBL:U08261 EMBL:U08262
EMBL:U08263 EMBL:U08264 EMBL:U08265 EMBL:U08267 EMBL:U08268
EMBL:S39217 EMBL:S39218 EMBL:S39219 EMBL:S39220 EMBL:S39221
EMBL:X65227 IPI:IPI00198625 IPI:IPI00231254 IPI:IPI00231255
IPI:IPI00231256 IPI:IPI00231257 IPI:IPI00231259 IPI:IPI00389747
PIR:JN0336 PIR:JN0337 PIR:JN0338 PIR:JN0339 PIR:JN0340 PIR:JN0341
PIR:JN0342 PIR:S19710 RefSeq:NP_001257531.1 RefSeq:NP_001257532.1
RefSeq:NP_001257534.1 RefSeq:NP_001257537.1 RefSeq:NP_001257539.1
RefSeq:NP_058706.1 UniGene:Rn.9840 PDB:1PB7 PDB:1PB8 PDB:1PB9
PDB:1PBQ PDB:1Y1M PDB:1Y1Z PDB:1Y20 PDB:3Q41 PDBsum:1PB7 PDBsum:1PB8
PDBsum:1PB9 PDBsum:1PBQ PDBsum:1Y1M PDBsum:1Y1Z PDBsum:1Y20
PDBsum:3Q41 ProteinModelPortal:P35439 SMR:P35439 DIP:DIP-674N
IntAct:P35439 MINT:MINT-101336 STRING:P35439 PhosphoSite:P35439
PRIDE:P35439 Ensembl:ENSRNOT00000037725 Ensembl:ENSRNOT00000044246
Ensembl:ENSRNOT00000049297 GeneID:24408 KEGG:rno:24408 UCSC:RGD:2736
BindingDB:P35439 ChEMBL:CHEMBL330 EvolutionaryTrace:P35439
NextBio:603223 ArrayExpress:P35439 Genevestigator:P35439
GermOnline:ENSRNOG00000011726 Uniprot:P35439
Length = 938
Score = 209 (78.6 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 73/313 (23%), Positives = 142/313 (45%)
Query: 367 DGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR 426
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 491 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPRS 549
Query: 427 NAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFWF 479
F+QP LW+ G + ++++L+ +VN + + ++ WF
Sbjct: 550 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 609
Query: 480 SFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN- 536
S+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 610 SWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIND 669
Query: 537 -LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGIA 590
L D Y ++ S + +Q+ R + +N +E E Q N A
Sbjct: 670 PRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLHA 728
Query: 591 AAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMK 650
+D + Q C T E F++ GFG SP +VS +IL E M+
Sbjct: 729 FIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENGFME 786
Query: 651 EIEDAWFKKHSSC 663
+++ W + + C
Sbjct: 787 DLDKTWVR-YQEC 798
Score = 77 (32.2 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 215 ISQNGPKLLQALSSIRFR-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWSPEKGX 271
I + GP + L S ++ G+TG F DG + + + I+N+ N VG ++
Sbjct: 314 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN----- 368
Query: 272 XXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPK 331
R IIWPG T P+G+++ T +L++ ++ F +VK T+
Sbjct: 369 ------GTHVIPNDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTMSDG 418
Query: 332 T--QETSVVGYSIDVFKAVI 349
T +E +V G D K VI
Sbjct: 419 TCKEEFTVNG---DPVKKVI 435
Score = 51 (23.0 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 16/98 (16%), Positives = 39/98 (39%)
Query: 15 IIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKL 74
+++ + W + + D+ G L L+ +++ P T + + L +
Sbjct: 154 MMRVYNWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQFDP-GTKN-VTALLMEA 211
Query: 75 FTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 212 RELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLV 249
>UNIPROTKB|P35439 [details] [associations]
symbol:Grin1 "Glutamate receptor ionotropic, NMDA 1"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2736
GO:GO:0014069 GO:GO:0051592 GO:GO:0060992 GO:GO:0030054
GO:GO:0045211 GO:GO:0043195 GO:GO:0048511 GO:GO:0030288
GO:GO:0007611 GO:GO:0014070 GO:GO:0043083 GO:GO:0010942
GO:GO:0032590 InterPro:IPR001828 GO:GO:0014075 GO:GO:0060076
GO:GO:0016595 GO:GO:2000463 GO:GO:0071287 GO:GO:0017146
GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0022843 GO:GO:0004972 KO:K05208
InterPro:IPR018882 Pfam:PF10562 PDB:2A5T PDBsum:2A5T CTD:2902
HOGENOM:HOG000231491 HOVERGEN:HBG052638 OMA:VYRSAAM EMBL:X63255
EMBL:AY157515 EMBL:U08261 EMBL:U08262 EMBL:U08263 EMBL:U08264
EMBL:U08265 EMBL:U08267 EMBL:U08268 EMBL:S39217 EMBL:S39218
EMBL:S39219 EMBL:S39220 EMBL:S39221 EMBL:X65227 IPI:IPI00198625
IPI:IPI00231254 IPI:IPI00231255 IPI:IPI00231256 IPI:IPI00231257
IPI:IPI00231259 IPI:IPI00389747 PIR:JN0336 PIR:JN0337 PIR:JN0338
PIR:JN0339 PIR:JN0340 PIR:JN0341 PIR:JN0342 PIR:S19710
RefSeq:NP_001257531.1 RefSeq:NP_001257532.1 RefSeq:NP_001257534.1
RefSeq:NP_001257537.1 RefSeq:NP_001257539.1 RefSeq:NP_058706.1
UniGene:Rn.9840 PDB:1PB7 PDB:1PB8 PDB:1PB9 PDB:1PBQ PDB:1Y1M
PDB:1Y1Z PDB:1Y20 PDB:3Q41 PDBsum:1PB7 PDBsum:1PB8 PDBsum:1PB9
PDBsum:1PBQ PDBsum:1Y1M PDBsum:1Y1Z PDBsum:1Y20 PDBsum:3Q41
ProteinModelPortal:P35439 SMR:P35439 DIP:DIP-674N IntAct:P35439
MINT:MINT-101336 STRING:P35439 PhosphoSite:P35439 PRIDE:P35439
Ensembl:ENSRNOT00000037725 Ensembl:ENSRNOT00000044246
Ensembl:ENSRNOT00000049297 GeneID:24408 KEGG:rno:24408
UCSC:RGD:2736 BindingDB:P35439 ChEMBL:CHEMBL330
EvolutionaryTrace:P35439 NextBio:603223 ArrayExpress:P35439
Genevestigator:P35439 GermOnline:ENSRNOG00000011726 Uniprot:P35439
Length = 938
Score = 209 (78.6 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 73/313 (23%), Positives = 142/313 (45%)
Query: 367 DGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR 426
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 491 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPRS 549
Query: 427 NAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFWF 479
F+QP LW+ G + ++++L+ +VN + + ++ WF
Sbjct: 550 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 609
Query: 480 SFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN- 536
S+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 610 SWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIND 669
Query: 537 -LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGIA 590
L D Y ++ S + +Q+ R + +N +E E Q N A
Sbjct: 670 PRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLHA 728
Query: 591 AAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMK 650
+D + Q C T E F++ GFG SP +VS +IL E M+
Sbjct: 729 FIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENGFME 786
Query: 651 EIEDAWFKKHSSC 663
+++ W + + C
Sbjct: 787 DLDKTWVR-YQEC 798
Score = 77 (32.2 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 215 ISQNGPKLLQALSSIRFR-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWSPEKGX 271
I + GP + L S ++ G+TG F DG + + + I+N+ N VG ++
Sbjct: 314 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN----- 368
Query: 272 XXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPK 331
R IIWPG T P+G+++ T +L++ ++ F +VK T+
Sbjct: 369 ------GTHVIPNDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTMSDG 418
Query: 332 T--QETSVVGYSIDVFKAVI 349
T +E +V G D K VI
Sbjct: 419 TCKEEFTVNG---DPVKKVI 435
Score = 51 (23.0 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 16/98 (16%), Positives = 39/98 (39%)
Query: 15 IIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKL 74
+++ + W + + D+ G L L+ +++ P T + + L +
Sbjct: 154 MMRVYNWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQFDP-GTKN-VTALLMEA 211
Query: 75 FTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 212 RELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLV 249
>MGI|MGI:95815 [details] [associations]
symbol:Grik2 "glutamate receptor, ionotropic, kainate 2 (beta
2)" species:10090 "Mus musculus" [GO:0001662 "behavioral fear
response" evidence=IMP] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IMP] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=ISO;IGI;IMP] [GO:0008066
"glutamate receptor activity" evidence=ISO] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=ISO;IC] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISO;IGI;IMP;IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031624
"ubiquitin conjugating enzyme binding" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0032839
"dendrite cytoplasm" evidence=ISO] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI;IMP;IDA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IMP]
[GO:0042391 "regulation of membrane potential"
evidence=IGI;IMP;IDA] [GO:0042734 "presynaptic membrane"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043113
"receptor clustering" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043204 "perikaryon" evidence=ISO] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IGI]
[GO:0043525 "positive regulation of neuron apoptotic process"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO;TAS] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0046328 "regulation of
JNK cascade" evidence=ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048172 "regulation
of short-term neuronal synaptic plasticity" evidence=ISO;IMP]
[GO:0050804 "regulation of synaptic transmission" evidence=ISO]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=ISO] [GO:0051402 "neuron apoptotic process" evidence=ISO]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IGI] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IGI;IMP]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IGI;IMP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 MGI:MGI:95815 Pfam:PF01094
GO:GO:0006886 GO:GO:0016020 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0043204
GO:GO:0051402 GO:GO:0045202 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249
GO:GO:0005622 GO:GO:0006874 GO:GO:0019228 GO:GO:0043113
GO:GO:0032839 GO:GO:0046328 GO:GO:0001662 GO:GO:0048169
InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806 eggNOG:NOG316680
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
OrthoDB:EOG41C6VH EMBL:X66117 EMBL:D10054 EMBL:U31443 EMBL:AC113305
IPI:IPI00131566 IPI:IPI00223171 PIR:A43954 PIR:S35792
UniGene:Mm.332838 ProteinModelPortal:P39087 SMR:P39087
IntAct:P39087 STRING:P39087 PhosphoSite:P39087 PaxDb:P39087
PRIDE:P39087 Ensembl:ENSMUST00000079751 Ensembl:ENSMUST00000105484
Ensembl:ENSMUST00000105485 Ensembl:ENSMUST00000105487
GeneTree:ENSGT00590000083056 InParanoid:P39087 Bgee:P39087
Genevestigator:P39087 GermOnline:ENSMUSG00000056073 Uniprot:P39087
Length = 908
Score = 185 (70.2 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 76/341 (22%), Positives = 134/341 (39%)
Query: 219 GPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGFWSPEKGXXXXX 275
G + + + + GLTG F +G ++I++ G +G W P G
Sbjct: 356 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPSSGLNMTE 415
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P + T + + L V +++ + F K + P
Sbjct: 416 SQKGK----------PANITDS-------LSNRSLIVTTILEEPYVLFKK-SDKPLYGND 457
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
GY ID+ + + L + V Y D + G +N ++ ++ + D V
Sbjct: 458 RFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVN-GQWNGMVRELIDHKADLAVAP 516
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSG 444
I + R +DF+ P+ G+S++ + + FL PL+ D+W+ S
Sbjct: 517 LAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSC 576
Query: 445 CFFIFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFV 500
F+ F W H N D + + SFWF ++ E + L+ R V
Sbjct: 577 VLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIV 636
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
+W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 637 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 677
Score = 144 (55.7 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 55/217 (25%), Positives = 101/217 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF ++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I
Sbjct: 611 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 670
Query: 535 VNLLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSHEECDELFQK 582
+ L K+ G + + K S + K F R+ V+ S+EE Q+
Sbjct: 671 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEG---IQR 727
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+ A E + + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 728 VLTSD--YAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 784
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ E K+ +++ W++ + CP+ + A +LG+ +
Sbjct: 785 LQEEGKLHMMKEKWWRGNG-CPEEESK-EASALGVQN 819
Score = 107 (42.7 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 61/273 (22%), Positives = 108/273 (39%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDD 65
SS AI +++ F W+ +Y D+ G LI L + ++A +R R I L D
Sbjct: 154 SSLSRAILDLVQFFKWKTVTVVY-DDSTG--LI-RLQELIKA-PSRYNLRLKIRQLPADT 208
Query: 66 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
+ K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 209 KDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 267
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPS----LFDAELNIFGLLAYDA 180
P + + G R + + + +W + LQ P L D + L YDA
Sbjct: 268 PYRYSGVN-MTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDA 326
Query: 181 TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
++VAV++ F + VSS + G + + + + GLTG F
Sbjct: 327 VHVVSVAVQQ-------FPQMTVSS--LQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 241 --VDGQLQSSAFEIINVNN-GARGVGFWSPEKG 270
+G ++I++ G +G W P G
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPSSG 410
>UNIPROTKB|Q13003 [details] [associations]
symbol:GRIK3 "Glutamate receptor ionotropic, kainate 3"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0008066 "glutamate receptor activity"
evidence=TAS] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0007215 "glutamate receptor signaling
pathway" evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0051967 "negative regulation of synaptic
transmission, glutamatergic" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0042391 "regulation of membrane potential"
evidence=ISS;IDA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISS;IDA] [GO:0030424 "axon" evidence=ISS]
[GO:0032839 "dendrite cytoplasm" evidence=ISS] [GO:0043195
"terminal bouton" evidence=ISS] [GO:0043204 "perikaryon"
evidence=ISS] [GO:0007216 "G-protein coupled glutamate receptor
signaling pathway" evidence=IDA] [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0007196
"adenylate cyclase-inhibiting G-protein coupled glutamate receptor
signaling pathway" evidence=IDA] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISS;IDA] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005887 EMBL:CH471059
GO:GO:0051967 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0043195 DrugBank:DB00142 GO:GO:0042391
GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
OrthoDB:EOG41C6VH EMBL:U16127 EMBL:U16128 EMBL:AL355386
EMBL:AC117945 EMBL:S69349 IPI:IPI00011397 PIR:I59604
RefSeq:NP_000822.2 UniGene:Hs.128848 ProteinModelPortal:Q13003
SMR:Q13003 STRING:Q13003 PhosphoSite:Q13003 DMDM:212276502
PaxDb:Q13003 PRIDE:Q13003 DNASU:2899 Ensembl:ENST00000373091
GeneID:2899 KEGG:hsa:2899 UCSC:uc001caz.2 CTD:2899
GeneCards:GC01M037261 H-InvDB:HIX0028621 HGNC:HGNC:4581
HPA:HPA014709 MIM:138243 neXtProt:NX_Q13003 PharmGKB:PA28975
InParanoid:Q13003 KO:K05203 OMA:EEQAFRF PhylomeDB:Q13003
BindingDB:Q13003 ChEMBL:CHEMBL3684 GenomeRNAi:2899 NextBio:11475
ArrayExpress:Q13003 Bgee:Q13003 CleanEx:HS_GRIK3
Genevestigator:Q13003 GermOnline:ENSG00000163873 GO:GO:0001640
Uniprot:Q13003
Length = 919
Score = 182 (69.1 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 57/218 (26%), Positives = 97/218 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY ID+ K + L ++ V Y D G +N ++ ++ + D V TI
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSGCFF 447
R +DF+ P+ GVS++ + + + FL PL+ D+W+ S F
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 448 IFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+ F W H N + + SFWF +++ E + L+ R + +
Sbjct: 582 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 642 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 679
Score = 155 (59.6 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 55/212 (25%), Positives = 95/212 (44%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF +++ E + L+ R + +W F LI+I SYTA+L + LTV++++ I
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 535 VNLLIKRGD-NVGYQKGSFVLGILKQLGFDE-RKLVVYNSHEECDELFQKGSANGGIAAA 592
+ L K+ G K + K+ K+ + S + K + G I A
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKP--SALVKNNEEG-IQRA 729
Query: 593 FDEIPYAKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTE 645
YA L+ + Q T + + G+G P+ SP ++ AIL + E
Sbjct: 730 LTA-DYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQE 788
Query: 646 GDKMKEIEDAWFKKHSSCPDAGTVVSARSLGL 677
DK+ +++ W++ S CP+ A +LG+
Sbjct: 789 EDKLHIMKEKWWRG-SGCPEEENK-EASALGI 818
Score = 110 (43.8 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 59/269 (21%), Positives = 110/269 (40%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQ--IE 68
AI +++ WR A +Y D+ G + L A + R+ R + P+ +DD +
Sbjct: 162 AILDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PIDSDDSRPLL 218
Query: 69 KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVT 128
KE+ + + R+ I ++ ++I ++A +G+M + +I T + LEP
Sbjct: 219 KEMKR--GREFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRY 274
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSAL 184
+ + G R + +W + LQ P L D + L YDA +
Sbjct: 275 SGVN-LTGFRILNVDNPHVSAIVEKWSMERLQAAPRSESGLLDGVMMTDAALLYDAVHIV 333
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VD 242
+V ++A ++ N+ + G + + + ++ GLTG +F
Sbjct: 334 SVCYQRA---------PQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTS 384
Query: 243 GQLQSSAFEIINVN-NGARGVGFWSPEKG 270
G +II++ +G VG WSP G
Sbjct: 385 GLRTDFDLDIISLKEDGLEKVGVWSPADG 413
>UNIPROTKB|F8WEZ8 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0019228
"regulation of action potential in neuron" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0048169 "regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0051402 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 EMBL:AL109919
EMBL:AP002528 EMBL:AP002529 EMBL:AP002530 HGNC:HGNC:4580
IPI:IPI01012035 ProteinModelPortal:F8WEZ8 SMR:F8WEZ8
Ensembl:ENST00000369134 ArrayExpress:F8WEZ8 Bgee:F8WEZ8
Uniprot:F8WEZ8
Length = 859
Score = 185 (70.2 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 76/341 (22%), Positives = 135/341 (39%)
Query: 219 GPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGFWSPEKGXXXXX 275
G + + + + GLTG F +G ++I++ G +G W P G
Sbjct: 307 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTE 366
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P + T + + L V +++ + F K + P
Sbjct: 367 SQKGK----------PANITDS-------LSNRSLIVTTILEEPYVLFKK-SDKPLYGND 408
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
GY ID+ + + L + V Y D ++G +N ++ ++ + D V
Sbjct: 409 RFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD-ANGQWNGMVRELIDHKADLAVAP 467
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSG 444
I + R +DF+ P+ G+S++ + + FL PL+ D+W+ S
Sbjct: 468 LAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSC 527
Query: 445 CFFIFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFV 500
F+ F W H N D + + SFWF ++ E + L+ R V
Sbjct: 528 VLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIV 587
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
+W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 588 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 628
Score = 144 (55.7 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 55/217 (25%), Positives = 101/217 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF ++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I
Sbjct: 562 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 621
Query: 535 VNLLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSHEECDELFQK 582
+ L K+ G + + K S + K F R+ V+ S+EE Q+
Sbjct: 622 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEG---IQR 678
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+ A E + + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 679 VLTSD--YAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 735
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ E K+ +++ W++ + CP+ + A +LG+ +
Sbjct: 736 LQEEGKLHMMKEKWWRGNG-CPEEESK-EASALGVQN 770
Score = 106 (42.4 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 61/273 (22%), Positives = 108/273 (39%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDD 65
SS AI +++ F W+ +Y D+ G LI L + ++A +R R I L D
Sbjct: 105 SSLSRAILDLVQFFKWKTVTVVY-DDSTG--LI-RLQELIKA-PSRYNLRLKIRQLPADT 159
Query: 66 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
+ K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 160 KDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 218
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPS----LFDAELNIFGLLAYDA 180
P + + G R + + + +W + LQ P L D + L YDA
Sbjct: 219 PYRYSGVN-MTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDA 277
Query: 181 TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
++VAV++ F + VSS + G + + + + GLTG F
Sbjct: 278 VHVVSVAVQQ-------FPQMTVSS--LQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 328
Query: 241 --VDGQLQSSAFEIINVNN-GARGVGFWSPEKG 270
+G ++I++ G +G W P G
Sbjct: 329 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASG 361
>UNIPROTKB|Q13002 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0001662 "behavioral
fear response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=IEA] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0048172 "regulation of short-term
neuronal synaptic plasticity" evidence=IMP] [GO:0050804 "regulation
of synaptic transmission" evidence=IDA] [GO:0050806 "positive
regulation of synaptic transmission" evidence=IMP] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=NAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0005887 GO:GO:0051967 GO:GO:0007268 EMBL:CH471051
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0051402
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 DrugBank:DB00142 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
Orphanet:88616 GO:GO:0050806 eggNOG:NOG316680 GO:GO:0005234
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:U16126
EMBL:AJ252246 EMBL:AJ301608 EMBL:AJ301609 EMBL:AJ301610
EMBL:HM149335 EMBL:HM149336 EMBL:HM149337 EMBL:HM149338
EMBL:HM149339 EMBL:AL109919 EMBL:AP002528 EMBL:AP002529
EMBL:AP002530 IPI:IPI00011396 IPI:IPI00396613 IPI:IPI00642591
IPI:IPI00746275 IPI:IPI00815931 PIR:A54260 RefSeq:NP_001159719.1
RefSeq:NP_068775.1 RefSeq:NP_786944.1 UniGene:Hs.98262 PDB:3QXM
PDBsum:3QXM ProteinModelPortal:Q13002 SMR:Q13002 IntAct:Q13002
STRING:Q13002 PhosphoSite:Q13002 DMDM:2492627 PaxDb:Q13002
PRIDE:Q13002 DNASU:2898 Ensembl:ENST00000318991
Ensembl:ENST00000369137 Ensembl:ENST00000369138
Ensembl:ENST00000413795 Ensembl:ENST00000421544 GeneID:2898
KEGG:hsa:2898 UCSC:uc003pqn.3 UCSC:uc003pqo.4 UCSC:uc010kcw.3
CTD:2898 GeneCards:GC06P101846 H-InvDB:HIX0006094 HGNC:HGNC:4580
HPA:CAB022463 HPA:HPA014395 HPA:HPA014623 MIM:138244 MIM:611092
neXtProt:NX_Q13002 PharmGKB:PA164741600 InParanoid:Q13002 KO:K05202
OMA:VNGQWNG OrthoDB:EOG41C6VH PhylomeDB:Q13002 BindingDB:Q13002
ChEMBL:CHEMBL3683 GenomeRNAi:2898 NextBio:11469 ArrayExpress:Q13002
Bgee:Q13002 CleanEx:HS_GRIK2 Genevestigator:Q13002
GermOnline:ENSG00000164418 Uniprot:Q13002
Length = 908
Score = 185 (70.2 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 76/341 (22%), Positives = 135/341 (39%)
Query: 219 GPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGFWSPEKGXXXXX 275
G + + + + GLTG F +G ++I++ G +G W P G
Sbjct: 356 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTE 415
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P + T + + L V +++ + F K + P
Sbjct: 416 SQKGK----------PANITDS-------LSNRSLIVTTILEEPYVLFKK-SDKPLYGND 457
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
GY ID+ + + L + V Y D ++G +N ++ ++ + D V
Sbjct: 458 RFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD-ANGQWNGMVRELIDHKADLAVAP 516
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSG 444
I + R +DF+ P+ G+S++ + + FL PL+ D+W+ S
Sbjct: 517 LAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSC 576
Query: 445 CFFIFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFV 500
F+ F W H N D + + SFWF ++ E + L+ R V
Sbjct: 577 VLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIV 636
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
+W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 637 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 677
Score = 144 (55.7 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 55/217 (25%), Positives = 101/217 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF ++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I
Sbjct: 611 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 670
Query: 535 VNLLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSHEECDELFQK 582
+ L K+ G + + K S + K F R+ V+ S+EE Q+
Sbjct: 671 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEG---IQR 727
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+ A E + + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 728 VLTSD--YAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 784
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ E K+ +++ W++ + CP+ + A +LG+ +
Sbjct: 785 LQEEGKLHMMKEKWWRGNG-CPEEESK-EASALGVQN 819
Score = 106 (42.4 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 61/273 (22%), Positives = 108/273 (39%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDD 65
SS AI +++ F W+ +Y D+ G LI L + ++A +R R I L D
Sbjct: 154 SSLSRAILDLVQFFKWKTVTVVY-DDSTG--LI-RLQELIKA-PSRYNLRLKIRQLPADT 208
Query: 66 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
+ K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 209 KDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 267
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPS----LFDAELNIFGLLAYDA 180
P + + G R + + + +W + LQ P L D + L YDA
Sbjct: 268 PYRYSGVN-MTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDA 326
Query: 181 TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
++VAV++ F + VSS + G + + + + GLTG F
Sbjct: 327 VHVVSVAVQQ-------FPQMTVSS--LQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 241 --VDGQLQSSAFEIINVNN-GARGVGFWSPEKG 270
+G ++I++ G +G W P G
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASG 410
>UNIPROTKB|Q38PU2 [details] [associations]
symbol:GRIK3 "Glutamate receptor ionotropic, kainate 3"
species:9541 "Macaca fascicularis" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=ISS] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0007196 "adenylate cyclase-inhibiting G-protein
coupled glutamate receptor signaling pathway" evidence=ISS]
[GO:0007216 "G-protein coupled glutamate receptor signaling
pathway" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0043197 "dendritic spine"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0043197
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839
HSSP:P22756 GO:GO:0001640 EMBL:DQ159935 ProteinModelPortal:Q38PU2
SMR:Q38PU2 Uniprot:Q38PU2
Length = 919
Score = 182 (69.1 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 57/218 (26%), Positives = 97/218 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY ID+ K + L ++ V Y D G +N ++ ++ + D V TI
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQD--DKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSGCFF 447
R +DF+ P+ GVS++ + + + FL PL+ D+W+ S F
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 448 IFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIV 503
+ F W H N + + SFWF +++ E + L+ R + +
Sbjct: 582 VIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 642 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 679
Score = 155 (59.6 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 55/212 (25%), Positives = 95/212 (44%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF +++ E + L+ R + +W F LI+I SYTA+L + LTV++++ I
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 535 VNLLIKRGD-NVGYQKGSFVLGILKQLGFDE-RKLVVYNSHEECDELFQKGSANGGIAAA 592
+ L K+ G K + K+ K+ + S + K + G I A
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKP--SALVKNNEEG-IQRA 729
Query: 593 FDEIPYAKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTE 645
YA L+ + Q T + + G+G P+ SP ++ AIL + E
Sbjct: 730 LTA-DYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQE 788
Query: 646 GDKMKEIEDAWFKKHSSCPDAGTVVSARSLGL 677
DK+ +++ W++ S CP+ A +LG+
Sbjct: 789 EDKLHIMKEKWWRG-SGCPEEENK-EASALGI 818
Score = 109 (43.4 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 59/269 (21%), Positives = 110/269 (40%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQ--IE 68
AI +++ WR A +Y D+ G + L A + R+ R + P+ +DD +
Sbjct: 162 AILDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQL--PVDSDDSRPLL 218
Query: 69 KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVT 128
KE+ + + R+ I ++ ++I ++A +G+M + +I T + LEP
Sbjct: 219 KEMKR--GREFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTT-LDLYALDLEPYRY 274
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSAL 184
+ + G R + +W + LQ P L D + L YDA +
Sbjct: 275 SGVN-LTGFRILNVDNPHVSAIVEKWSMERLQAAPRAESGLLDGVMMTDAALLYDAVHIV 333
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VD 242
+V ++A ++ N+ + G + + + ++ GLTG +F
Sbjct: 334 SVCYQRA---------PQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTS 384
Query: 243 GQLQSSAFEIINVN-NGARGVGFWSPEKG 270
G +II++ +G VG WSP G
Sbjct: 385 GLRTDFDLDIISLKEDGLEKVGVWSPADG 413
>UNIPROTKB|F1LP48 [details] [associations]
symbol:Grik2 "Glutamate receptor ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=IEA] [GO:0050806 "positive regulation
of synaptic transmission" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524
GO:GO:0035249 GO:GO:0005622 GO:GO:0006874 GO:GO:0019228
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0050806 GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
IPI:IPI00324708 PRIDE:F1LP48 Ensembl:ENSRNOT00000000415
ArrayExpress:F1LP48 Uniprot:F1LP48
Length = 870
Score = 184 (69.8 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 76/341 (22%), Positives = 134/341 (39%)
Query: 219 GPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGFWSPEKGXXXXX 275
G + + + + GLTG F +G ++I++ G +G W P G
Sbjct: 318 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTE 377
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P + T + + L V +++ + F K + P
Sbjct: 378 SQKGK----------PANITDS-------LSNRSLIVTTILEEPYVLFKK-SDKPLYGND 419
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
GY ID+ + + L + V Y D + G +N ++ ++ + D V
Sbjct: 420 RFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVN-GQWNGMVRELIDHKADLAVAP 478
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSG 444
I + R +DF+ P+ G+S++ + + FL PL+ D+W+ S
Sbjct: 479 LAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSC 538
Query: 445 CFFIFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFV 500
F+ F W H N D + + SFWF ++ E + L+ R V
Sbjct: 539 VLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIV 598
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
+W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 599 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 639
Score = 144 (55.7 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 55/217 (25%), Positives = 101/217 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF ++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I
Sbjct: 573 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 632
Query: 535 VNLLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSHEECDELFQK 582
+ L K+ G + + K S + K F R+ V+ S+EE Q+
Sbjct: 633 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEG---IQR 689
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+ A E + + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 690 VLTSD--YAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 746
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ E K+ +++ W++ + CP+ + A +LG+ +
Sbjct: 747 LQEEGKLHMMKEKWWRGNG-CPEEESK-EASALGVQN 781
Score = 106 (42.4 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 61/273 (22%), Positives = 108/273 (39%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDD 65
SS AI +++ F W+ +Y D+ G LI L + ++A +R R I L D
Sbjct: 116 SSLSRAILDLVQFFKWKTVTVVY-DDSTG--LI-RLQELIKA-PSRYNLRLKIRQLPADT 170
Query: 66 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
+ K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 171 KDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 229
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPS----LFDAELNIFGLLAYDA 180
P + + G R + + + +W + LQ P L D + L YDA
Sbjct: 230 PYRYSGVN-MTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDA 288
Query: 181 TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
++VAV++ F + VSS + G + + + + GLTG F
Sbjct: 289 VHVVSVAVQQ-------FPQMTVSS--LQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 339
Query: 241 --VDGQLQSSAFEIINVNN-GARGVGFWSPEKG 270
+G ++I++ G +G W P G
Sbjct: 340 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASG 372
>UNIPROTKB|F1NU20 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0019228 "regulation of action
potential in neuron" evidence=IEA] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IEA] [GO:0048172 "regulation
of short-term neuronal synaptic plasticity" evidence=IEA]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0006886 GO:GO:0051967
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0042734
GO:GO:0043524 GO:GO:0005622 GO:GO:0042391 GO:GO:0006874
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:AADN02002208 EMBL:AADN02002209
EMBL:AADN02002210 EMBL:AADN02002211 EMBL:AADN02002212
EMBL:AADN02002213 EMBL:AADN02002214 EMBL:AADN02002215
EMBL:AADN02002216 EMBL:AADN02002217 EMBL:AADN02002218
EMBL:AADN02002219 EMBL:AADN02002220 EMBL:AADN02002221
EMBL:AADN02002222 IPI:IPI00573083 ProteinModelPortal:F1NU20
Ensembl:ENSGALT00000024893 Uniprot:F1NU20
Length = 877
Score = 186 (70.5 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 59/219 (26%), Positives = 100/219 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---Y-AQPDGTSSGSYNDLIYQVFLGEFDAVVGDTT 394
GY ID+ + + L ++ V Y AQ D +SG +N ++ ++ + D V
Sbjct: 430 GYCIDLLRELSTILGFSYEIRLVEDGKYGAQED--ASGQWNGMVRELIDHKADLAVAPLA 487
Query: 395 IVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSGCF 446
I + R +DF+ P+ G+S++ + + FL PL+ D+W+ S
Sbjct: 488 ITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVL 547
Query: 447 FIFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVI 502
F+ F W H N D + + SFWF ++ E + L+ R V
Sbjct: 548 FVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGG 607
Query: 503 VWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
+W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 608 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 646
Score = 144 (55.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 55/217 (25%), Positives = 101/217 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF ++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I
Sbjct: 580 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 639
Query: 535 VNLLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSHEECDELFQK 582
+ L K+ G + + K S + K F R+ V+ S+EE Q+
Sbjct: 640 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEG---IQR 696
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+ A E + + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 697 VLTSD--YAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 753
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ E K+ +++ W++ + CP+ + A +LG+ +
Sbjct: 754 LQEEGKLHMMKEKWWRGNG-CPEEESK-EASALGVQN 788
Score = 104 (41.7 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 62/273 (22%), Positives = 108/273 (39%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDD 65
SS AI +++ F W+ +Y D+ G LI L + ++A +R R I L D
Sbjct: 123 SSLSRAILDLVQFFKWKTVTVVY-DDSTG--LI-RLQELIKA-PSRYNLRLKIRQLPADT 177
Query: 66 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
+ K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 178 KDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 236
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPS----LFDAELNIFGLLAYDA 180
P + + G R + + + +W + LQ P L D + L YDA
Sbjct: 237 PYRYSGVN-MTGFRILNTENSQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDA 295
Query: 181 TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
++VAV++ F + VSS + G + + + + GLTG F
Sbjct: 296 VHVVSVAVQQ-------FPQMTVSS--LQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 346
Query: 241 --VDGQLQSSAFEIINVNN-GARGVGFWSPEKG 270
+G ++I++ G VG W P G
Sbjct: 347 NKSNGLRTDFDLDVISLKEEGLEKVGTWDPLSG 379
>RGD|2733 [details] [associations]
symbol:Grik2 "glutamate receptor, ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=ISO] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA;ISO;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=ISO] [GO:0006886 "intracellular protein transport"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0008066 "glutamate receptor activity" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IDA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISO;IDA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IPI] [GO:0030424 "axon"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0031624
"ubiquitin conjugating enzyme binding" evidence=IPI] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0032839
"dendrite cytoplasm" evidence=IDA] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;TAS] [GO:0035249
"synaptic transmission, glutamatergic" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0042734
"presynaptic membrane" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043113 "receptor clustering" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=ISO] [GO:0043525 "positive regulation of neuron
apoptotic process" evidence=IMP] [GO:0045202 "synapse" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0046328
"regulation of JNK cascade" evidence=IMP] [GO:0048169 "regulation of
long-term neuronal synaptic plasticity" evidence=ISO] [GO:0048172
"regulation of short-term neuronal synaptic plasticity" evidence=ISO]
[GO:0050804 "regulation of synaptic transmission" evidence=ISO]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=ISO] [GO:0051402 "neuron apoptotic process" evidence=IMP]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2733 GO:GO:0006886
GO:GO:0042803 GO:GO:0043525 GO:GO:0051967 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0051402 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328 GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2898 KO:K05202
OrthoDB:EOG41C6VH EMBL:Z11548 EMBL:Z11715 IPI:IPI00324708 PIR:S19098
RefSeq:NP_062182.1 UniGene:Rn.87696 PDB:1S50 PDB:1S7Y PDB:1S9T
PDB:1SD3 PDB:1TT1 PDB:1YAE PDB:2I0B PDB:2I0C PDB:2XXR PDB:2XXT
PDB:2XXU PDB:2XXV PDB:2XXW PDB:2XXX PDB:2XXY PDB:3G3F PDB:3G3G
PDB:3G3H PDB:3G3I PDB:3G3J PDB:3G3K PDB:3H6G PDB:3H6H PDB:3QLT
PDB:3QLU PDB:3QLV PDBsum:1S50 PDBsum:1S7Y PDBsum:1S9T PDBsum:1SD3
PDBsum:1TT1 PDBsum:1YAE PDBsum:2I0B PDBsum:2I0C PDBsum:2XXR
PDBsum:2XXT PDBsum:2XXU PDBsum:2XXV PDBsum:2XXW PDBsum:2XXX
PDBsum:2XXY PDBsum:3G3F PDBsum:3G3G PDBsum:3G3H PDBsum:3G3I
PDBsum:3G3J PDBsum:3G3K PDBsum:3H6G PDBsum:3H6H PDBsum:3QLT
PDBsum:3QLU PDBsum:3QLV ProteinModelPortal:P42260 SMR:P42260
DIP:DIP-29256N STRING:P42260 PhosphoSite:P42260 PRIDE:P42260
GeneID:54257 KEGG:rno:54257 UCSC:RGD:2733 InParanoid:P42260
BindingDB:P42260 ChEMBL:CHEMBL3607 EvolutionaryTrace:P42260
NextBio:610770 ArrayExpress:P42260 Genevestigator:P42260
GermOnline:ENSRNOG00000000368 Uniprot:P42260
Length = 908
Score = 184 (69.8 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 76/341 (22%), Positives = 134/341 (39%)
Query: 219 GPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGFWSPEKGXXXXX 275
G + + + + GLTG F +G ++I++ G +G W P G
Sbjct: 356 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTE 415
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P + T + + L V +++ + F K + P
Sbjct: 416 SQKGK----------PANITDS-------LSNRSLIVTTILEEPYVLFKK-SDKPLYGND 457
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
GY ID+ + + L + V Y D + G +N ++ ++ + D V
Sbjct: 458 RFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVN-GQWNGMVRELIDHKADLAVAP 516
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSG 444
I + R +DF+ P+ G+S++ + + FL PL+ D+W+ S
Sbjct: 517 LAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSC 576
Query: 445 CFFIFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFV 500
F+ F W H N D + + SFWF ++ E + L+ R V
Sbjct: 577 VLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIV 636
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
+W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 637 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 677
Score = 144 (55.7 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 55/217 (25%), Positives = 101/217 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF ++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I
Sbjct: 611 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 670
Query: 535 VNLLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSHEECDELFQK 582
+ L K+ G + + K S + K F R+ V+ S+EE Q+
Sbjct: 671 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEG---IQR 727
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+ A E + + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 728 VLTSD--YAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 784
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ E K+ +++ W++ + CP+ + A +LG+ +
Sbjct: 785 LQEEGKLHMMKEKWWRGNG-CPEEESK-EASALGVQN 819
Score = 106 (42.4 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 61/273 (22%), Positives = 108/273 (39%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDD 65
SS AI +++ F W+ +Y D+ G LI L + ++A +R R I L D
Sbjct: 154 SSLSRAILDLVQFFKWKTVTVVY-DDSTG--LI-RLQELIKA-PSRYNLRLKIRQLPADT 208
Query: 66 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
+ K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 209 KDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 267
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPS----LFDAELNIFGLLAYDA 180
P + + G R + + + +W + LQ P L D + L YDA
Sbjct: 268 PYRYSGVN-MTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDA 326
Query: 181 TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
++VAV++ F + VSS + G + + + + GLTG F
Sbjct: 327 VHVVSVAVQQ-------FPQMTVSS--LQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 241 --VDGQLQSSAFEIINVNN-GARGVGFWSPEKG 270
+G ++I++ G +G W P G
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASG 410
>UNIPROTKB|P42260 [details] [associations]
symbol:Grik2 "Glutamate receptor ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IPI] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2733 GO:GO:0006886
GO:GO:0042803 GO:GO:0043525 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0051402
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0006874 GO:GO:0019228
GO:GO:0043113 GO:GO:0032839 GO:GO:0046328 GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2898 KO:K05202
OrthoDB:EOG41C6VH EMBL:Z11548 EMBL:Z11715 IPI:IPI00324708
PIR:S19098 RefSeq:NP_062182.1 UniGene:Rn.87696 PDB:1S50 PDB:1S7Y
PDB:1S9T PDB:1SD3 PDB:1TT1 PDB:1YAE PDB:2I0B PDB:2I0C PDB:2XXR
PDB:2XXT PDB:2XXU PDB:2XXV PDB:2XXW PDB:2XXX PDB:2XXY PDB:3G3F
PDB:3G3G PDB:3G3H PDB:3G3I PDB:3G3J PDB:3G3K PDB:3H6G PDB:3H6H
PDB:3QLT PDB:3QLU PDB:3QLV PDBsum:1S50 PDBsum:1S7Y PDBsum:1S9T
PDBsum:1SD3 PDBsum:1TT1 PDBsum:1YAE PDBsum:2I0B PDBsum:2I0C
PDBsum:2XXR PDBsum:2XXT PDBsum:2XXU PDBsum:2XXV PDBsum:2XXW
PDBsum:2XXX PDBsum:2XXY PDBsum:3G3F PDBsum:3G3G PDBsum:3G3H
PDBsum:3G3I PDBsum:3G3J PDBsum:3G3K PDBsum:3H6G PDBsum:3H6H
PDBsum:3QLT PDBsum:3QLU PDBsum:3QLV ProteinModelPortal:P42260
SMR:P42260 DIP:DIP-29256N STRING:P42260 PhosphoSite:P42260
PRIDE:P42260 GeneID:54257 KEGG:rno:54257 UCSC:RGD:2733
InParanoid:P42260 BindingDB:P42260 ChEMBL:CHEMBL3607
EvolutionaryTrace:P42260 NextBio:610770 ArrayExpress:P42260
Genevestigator:P42260 GermOnline:ENSRNOG00000000368 Uniprot:P42260
Length = 908
Score = 184 (69.8 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 76/341 (22%), Positives = 134/341 (39%)
Query: 219 GPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGFWSPEKGXXXXX 275
G + + + + GLTG F +G ++I++ G +G W P G
Sbjct: 356 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTE 415
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P + T + + L V +++ + F K + P
Sbjct: 416 SQKGK----------PANITDS-------LSNRSLIVTTILEEPYVLFKK-SDKPLYGND 457
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
GY ID+ + + L + V Y D + G +N ++ ++ + D V
Sbjct: 458 RFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVN-GQWNGMVRELIDHKADLAVAP 516
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSG 444
I + R +DF+ P+ G+S++ + + FL PL+ D+W+ S
Sbjct: 517 LAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSC 576
Query: 445 CFFIFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFV 500
F+ F W H N D + + SFWF ++ E + L+ R V
Sbjct: 577 VLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIV 636
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
+W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 637 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 677
Score = 144 (55.7 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 55/217 (25%), Positives = 101/217 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF ++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I
Sbjct: 611 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 670
Query: 535 VNLLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSHEECDELFQK 582
+ L K+ G + + K S + K F R+ V+ S+EE Q+
Sbjct: 671 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEG---IQR 727
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+ A E + + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 728 VLTSD--YAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 784
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ E K+ +++ W++ + CP+ + A +LG+ +
Sbjct: 785 LQEEGKLHMMKEKWWRGNG-CPEEESK-EASALGVQN 819
Score = 106 (42.4 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 61/273 (22%), Positives = 108/273 (39%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDD 65
SS AI +++ F W+ +Y D+ G LI L + ++A +R R I L D
Sbjct: 154 SSLSRAILDLVQFFKWKTVTVVY-DDSTG--LI-RLQELIKA-PSRYNLRLKIRQLPADT 208
Query: 66 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
+ K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 209 KDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 267
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPS----LFDAELNIFGLLAYDA 180
P + + G R + + + +W + LQ P L D + L YDA
Sbjct: 268 PYRYSGVN-MTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDA 326
Query: 181 TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
++VAV++ F + VSS + G + + + + GLTG F
Sbjct: 327 VHVVSVAVQQ-------FPQMTVSS--LQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 241 --VDGQLQSSAFEIINVNN-GARGVGFWSPEKG 270
+G ++I++ G +G W P G
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASG 410
>UNIPROTKB|B7Z1W1 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AC010613
EMBL:AC025156 EMBL:AC091960 EMBL:AC091962 UniGene:Hs.519693
UniGene:Hs.737709 HGNC:HGNC:4571 HOVERGEN:HBG051839 EMBL:AK294011
IPI:IPI00956375 SMR:B7Z1W1 STRING:B7Z1W1 Ensembl:ENST00000537037
Uniprot:B7Z1W1
Length = 716
Score = 198 (74.8 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 70/255 (27%), Positives = 118/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y+ + V Y D + ++N ++ ++ G D V TI
Sbjct: 391 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 449
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 450 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 506
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F ++ G S WFS F Q+ IS +L
Sbjct: 507 VLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSL 564
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 565 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAG 621
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ V+
Sbjct: 622 STKEF-FRRSKIAVF 635
Score = 88 (36.0 bits), Expect = 4.8e-16, Sum P(2) = 4.8e-16
Identities = 61/274 (22%), Positives = 117/274 (42%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 86 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 141
Query: 71 LYK-LFTMQTRVFIL-----HMLPSLGSRIFEKANEIG----LMNKGCVWI----MTDGM 116
L++ L + R+ ++ + LG I + N IG L N G + I +
Sbjct: 142 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 201
Query: 117 TNLLRTLEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLL 176
N+ + TD++ I ++ + + A ++ RV WKR P A L
Sbjct: 202 ANVTGFQLVNYTDTIPAKI-MQQW-KNSDARDHTRVDWKR------PKYTSA-------L 246
Query: 177 AYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTG 236
YD +A A + + + + A Q G + +AL +RF GLTG
Sbjct: 247 TYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLTG 305
Query: 237 DYIFVD-GQLQSSAFEIINV-NNGARGVGFWSPE 268
+ F + G+ + +I + ++G R +G+W+ +
Sbjct: 306 NVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 339
Score = 44 (20.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 26 PIYVDNQYGEELIPSLTDALQAI 48
P+ NQ+ +L P L DAL +I
Sbjct: 68 PVDTSNQFVLQLRPELQDALISI 90
>UNIPROTKB|J9NWC8 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
EMBL:AAEX03006734 Ensembl:ENSCAFT00000044506 Uniprot:J9NWC8
Length = 730
Score = 209 (78.6 bits), Expect = 5.5e-16, Sum P(3) = 5.5e-16
Identities = 73/313 (23%), Positives = 142/313 (45%)
Query: 367 DGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR 426
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 283 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPRS 341
Query: 427 NAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFWF 479
F+QP LW+ G + ++++L+ +VN + + ++ WF
Sbjct: 342 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 401
Query: 480 SFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN- 536
S+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 402 SWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIND 461
Query: 537 -LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGIA 590
L D Y ++ S + +Q+ R + +N +E E Q N A
Sbjct: 462 PRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLHA 520
Query: 591 AAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMK 650
+D + Q C T E F++ GFG SP +VS +IL E M+
Sbjct: 521 FIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENGFME 578
Query: 651 EIEDAWFKKHSSC 663
+++ W + + C
Sbjct: 579 DLDKTWVR-YQEC 590
Score = 78 (32.5 bits), Expect = 5.5e-16, Sum P(3) = 5.5e-16
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 215 ISQNGPKLLQALSSIRFR-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWSPEKGX 271
I + GP + L S ++ G+TG F DG + + + I+N+ N VG ++
Sbjct: 106 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN----- 160
Query: 272 XXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPK 331
R IIWPG T P+G+++ T +L++ ++ F +VK T+
Sbjct: 161 ------GTHVIPNDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDG 210
Query: 332 T--QETSVVGYSIDVFKAVI 349
T +E +V G D K VI
Sbjct: 211 TCKEEFTVNG---DPVKKVI 227
Score = 42 (19.8 bits), Expect = 5.5e-16, Sum P(3) = 5.5e-16
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 77 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 6 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLV 41
>UNIPROTKB|F1LNE4 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 IPI:IPI00952011 ProteinModelPortal:F1LNE4
Ensembl:ENSRNOT00000067113 ArrayExpress:F1LNE4 Uniprot:F1LNE4
Length = 756
Score = 189 (71.6 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 69/256 (26%), Positives = 117/256 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D + TI
Sbjct: 317 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 375
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 376 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 432
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F + ++ G S WFS F Q+ IS +L
Sbjct: 433 VLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 490
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 491 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSG 547
Query: 556 ILKQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 548 STKEF-FRRSKIAVFD 562
Score = 142 (55.0 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 470 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 527
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V++ ++ E +F + +A G
Sbjct: 528 ESAEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEG 583
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 584 VARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLA 643
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 644 VLKLNEQGLLDKLKNKWWYDKGECGSGG 671
Score = 97 (39.2 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 56/266 (21%), Positives = 110/266 (41%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 7 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 63
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 64 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 122
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P A + L YDA
Sbjct: 123 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQ 178
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 179 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 237
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 238 NGKRINYTINIMELKTNGPRKIGYWS 263
>UNIPROTKB|F1PDR1 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AAEX03003077 Ensembl:ENSCAFT00000028234
Uniprot:F1PDR1
Length = 806
Score = 198 (74.8 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 70/255 (27%), Positives = 118/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y+ + V Y D + ++N ++ ++ G D V TI
Sbjct: 437 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 495
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 552
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F ++ G S WFS F Q+ IS +L
Sbjct: 553 VLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSL 610
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 611 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAG 667
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ V+
Sbjct: 668 STKEF-FRRSKIAVF 681
Score = 146 (56.5 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 590 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 647
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V+ ++ + E +F + + G
Sbjct: 648 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 703
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
I + YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 704 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 763
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 764 VLKLNEQGLLDKLKNKWWYDKGECGSGG 791
Score = 88 (36.0 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 61/274 (22%), Positives = 117/274 (42%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 187
Query: 71 LYK-LFTMQTRVFIL-----HMLPSLGSRIFEKANEIG----LMNKGCVWI----MTDGM 116
L++ L + R+ ++ + LG I + N IG L N G + I +
Sbjct: 188 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 247
Query: 117 TNLLRTLEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLL 176
N+ + TD++ I ++ + + A ++ RV WKR P A L
Sbjct: 248 ANVTGFQLVNYTDTIPAKI-MQQW-KNSDARDHTRVDWKR------PKYTSA-------L 292
Query: 177 AYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTG 236
YD +A A + + + + A Q G + +AL +RF GLTG
Sbjct: 293 TYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLTG 351
Query: 237 DYIFVD-GQLQSSAFEIINV-NNGARGVGFWSPE 268
+ F + G+ + +I + ++G R +G+W+ +
Sbjct: 352 NVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 385
Score = 44 (20.5 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 26 PIYVDNQYGEELIPSLTDALQAI 48
P+ NQ+ +L P L DAL +I
Sbjct: 114 PVDTSNQFVLQLRPELQDALISI 136
>UNIPROTKB|F1P7K5 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:AAEX03008563 EMBL:AAEX03008564
Ensembl:ENSCAFT00000005767 Uniprot:F1P7K5
Length = 859
Score = 185 (70.2 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 76/341 (22%), Positives = 135/341 (39%)
Query: 219 GPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGFWSPEKGXXXXX 275
G + + + + GLTG F +G ++I++ G +G W P G
Sbjct: 307 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTE 366
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P + T + + L V +++ + F K + P
Sbjct: 367 SQKGK----------PANITDS-------LSNRSLIVTTILEEPYVLFKK-SDKPLYGND 408
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
GY ID+ + + L + V Y D ++G +N ++ ++ + D V
Sbjct: 409 RFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD-ANGQWNGMVRELIDHKADLAVAP 467
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSG 444
I + R +DF+ P+ G+S++ + + FL PL+ D+W+ S
Sbjct: 468 LAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSC 527
Query: 445 CFFIFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFV 500
F+ F W H N D + + SFWF ++ E + L+ R V
Sbjct: 528 VLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIV 587
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
+W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 588 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 628
Score = 144 (55.7 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 55/217 (25%), Positives = 101/217 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF ++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I
Sbjct: 562 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 621
Query: 535 VNLLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSHEECDELFQK 582
+ L K+ G + + K S + K F R+ V+ S+EE Q+
Sbjct: 622 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEG---IQR 678
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+ A E + + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 679 VLTSD--YAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 735
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ E K+ +++ W++ + CP+ + A +LG+ +
Sbjct: 736 LQEEGKLHMMKEKWWRGNG-CPEEESK-EASALGVQN 770
Score = 102 (41.0 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 60/273 (21%), Positives = 107/273 (39%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDD 65
SS AI +++ F W+ +Y D+ G LI L + ++A +R R I L D
Sbjct: 105 SSLSRAILDLVQFFKWKTVTVVY-DDSTG--LI-RLQELIKA-PSRYNLRLKIRQLPADT 159
Query: 66 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
+ K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 160 KDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 218
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPS----LFDAELNIFGLLAYDA 180
P + + G R + + + +W + LQ P L D + L YDA
Sbjct: 219 PYRYSGVN-MTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDA 277
Query: 181 TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
++V V++ F + VSS + G + + + + GLTG F
Sbjct: 278 VHVVSVGVQQ-------FPQMTVSS--LQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 328
Query: 241 --VDGQLQSSAFEIINVNN-GARGVGFWSPEKG 270
+G ++I++ G +G W P G
Sbjct: 329 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASG 361
>UNIPROTKB|F1P7K6 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IEA] [GO:0048172 "regulation of short-term
neuronal synaptic plasticity" evidence=IEA] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0019228 "regulation of action potential in neuron"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524
GO:GO:0035249 GO:GO:0005622 GO:GO:0006874 GO:GO:0019228
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0050806 GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:AAEX03008563 EMBL:AAEX03008564
Ensembl:ENSCAFT00000005766 Uniprot:F1P7K6
Length = 891
Score = 185 (70.2 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 76/341 (22%), Positives = 135/341 (39%)
Query: 219 GPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGFWSPEKGXXXXX 275
G + + + + GLTG F +G ++I++ G +G W P G
Sbjct: 339 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTE 398
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P + T + + L V +++ + F K + P
Sbjct: 399 SQKGK----------PANITDS-------LSNRSLIVTTILEEPYVLFKK-SDKPLYGND 440
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
GY ID+ + + L + V Y D ++G +N ++ ++ + D V
Sbjct: 441 RFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD-ANGQWNGMVRELIDHKADLAVAP 499
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSG 444
I + R +DF+ P+ G+S++ + + FL PL+ D+W+ S
Sbjct: 500 LAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSC 559
Query: 445 CFFIFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFV 500
F+ F W H N D + + SFWF ++ E + L+ R V
Sbjct: 560 VLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIV 619
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
+W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 620 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 660
Score = 144 (55.7 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 55/217 (25%), Positives = 101/217 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF ++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I
Sbjct: 594 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 653
Query: 535 VNLLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSHEECDELFQK 582
+ L K+ G + + K S + K F R+ V+ S+EE Q+
Sbjct: 654 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEG---IQR 710
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+ A E + + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 711 VLTSD--YAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 767
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ E K+ +++ W++ + CP+ + A +LG+ +
Sbjct: 768 LQEEGKLHMMKEKWWRGNG-CPEEESK-EASALGVQN 802
Score = 102 (41.0 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 60/273 (21%), Positives = 107/273 (39%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDD 65
SS AI +++ F W+ +Y D+ G LI L + ++A +R R I L D
Sbjct: 137 SSLSRAILDLVQFFKWKTVTVVY-DDSTG--LI-RLQELIKA-PSRYNLRLKIRQLPADT 191
Query: 66 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
+ K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 192 KDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 250
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPS----LFDAELNIFGLLAYDA 180
P + + G R + + + +W + LQ P L D + L YDA
Sbjct: 251 PYRYSGVN-MTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDA 309
Query: 181 TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
++V V++ F + VSS + G + + + + GLTG F
Sbjct: 310 VHVVSVGVQQ-------FPQMTVSS--LQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 360
Query: 241 --VDGQLQSSAFEIINVNN-GARGVGFWSPEKG 270
+G ++I++ G +G W P G
Sbjct: 361 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASG 393
>UNIPROTKB|F1MG21 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=IEA]
[GO:0048172 "regulation of short-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0006886 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0005622 GO:GO:0006874
GO:GO:0019228 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 CTD:2898 KO:K05202 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:DAAA02026130 EMBL:DAAA02026131
EMBL:DAAA02026132 EMBL:DAAA02026133 EMBL:DAAA02026134
EMBL:DAAA02026135 EMBL:DAAA02026136 EMBL:DAAA02026137
EMBL:DAAA02026138 EMBL:DAAA02026139 EMBL:DAAA02026140
EMBL:DAAA02026141 EMBL:DAAA02026142 IPI:IPI00706450
RefSeq:NP_001179992.1 UniGene:Bt.32868 ProteinModelPortal:F1MG21
Ensembl:ENSBTAT00000015563 GeneID:615226 KEGG:bta:615226
NextBio:20899512 Uniprot:F1MG21
Length = 908
Score = 185 (70.2 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 76/341 (22%), Positives = 135/341 (39%)
Query: 219 GPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGFWSPEKGXXXXX 275
G + + + + GLTG F +G ++I++ G +G W P G
Sbjct: 356 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTE 415
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P + T + + L V +++ + F K + P
Sbjct: 416 SQKGK----------PANITDS-------LSNRSLIVTTILEEPYVLFKK-SDKPLYGND 457
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
GY ID+ + + L + V Y D ++G +N ++ ++ + D V
Sbjct: 458 RFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD-ANGQWNGMVRELIDHKADLAVAP 516
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSG 444
I + R +DF+ P+ G+S++ + + FL PL+ D+W+ S
Sbjct: 517 LAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSC 576
Query: 445 CFFIFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFV 500
F+ F W H N D + + SFWF ++ E + L+ R V
Sbjct: 577 VLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIV 636
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
+W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 637 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 677
Score = 144 (55.7 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 55/217 (25%), Positives = 101/217 (46%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
SFWF ++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I
Sbjct: 611 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 670
Query: 535 VNLLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSHEECDELFQK 582
+ L K+ G + + K S + K F R+ V+ S+EE Q+
Sbjct: 671 ADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEG---IQR 727
Query: 583 GSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
+ A E + + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 728 VLTSD--YAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQ 784
Query: 643 VTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ E K+ +++ W++ + CP+ + A +LG+ +
Sbjct: 785 LQEEGKLHMMKEKWWRGNG-CPEEESK-EASALGVQN 819
Score = 102 (41.0 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 60/273 (21%), Positives = 107/273 (39%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDD 65
SS AI +++ F W+ +Y D+ G LI L + ++A +R R I L D
Sbjct: 154 SSLSRAILDLVQFFKWKTVTVVY-DDSTG--LI-RLQELIKA-PSRYNLRLKIRQLPADT 208
Query: 66 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
+ K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 209 KDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 267
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPS----LFDAELNIFGLLAYDA 180
P + + G R + + + +W + LQ P L D + L YDA
Sbjct: 268 PYRYSGVN-MTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDA 326
Query: 181 TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
++V V++ F + VSS + G + + + + GLTG F
Sbjct: 327 VHVVSVGVQQ-------FPQMTVSS--LQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 377
Query: 241 --VDGQLQSSAFEIINVNN-GARGVGFWSPEKG 270
+G ++I++ G +G W P G
Sbjct: 378 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASG 410
>UNIPROTKB|F8W7L6 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4572
EMBL:AC079233 EMBL:AC112240 IPI:IPI01012058
ProteinModelPortal:F8W7L6 SMR:F8W7L6 Ensembl:ENST00000323661
ArrayExpress:F8W7L6 Bgee:F8W7L6 Uniprot:F8W7L6
Length = 730
Score = 189 (71.6 bits), Expect = 9.0e-16, Sum P(2) = 9.0e-16
Identities = 69/256 (26%), Positives = 117/256 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D + TI
Sbjct: 397 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 455
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 456 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 512
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F + ++ G S WFS F Q+ IS +L
Sbjct: 513 VLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 570
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 571 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSG 627
Query: 556 ILKQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 628 STKEF-FRRSKIAVFD 642
Score = 95 (38.5 bits), Expect = 9.0e-16, Sum P(2) = 9.0e-16
Identities = 55/266 (20%), Positives = 110/266 (41%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 87 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 143
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ + L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 144 MYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 202
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P + L YDA
Sbjct: 203 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQ 258
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 259 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 317
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 318 NGKRINYTINIMELKTNGPRKIGYWS 343
>UNIPROTKB|F1P0E1 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00681402 Ensembl:ENSGALT00000027749 Uniprot:F1P0E1
Length = 819
Score = 198 (74.8 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 73/255 (28%), Positives = 119/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + VP Y D + +N ++ ++ G+ + V TI
Sbjct: 362 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETK-IWNGMVGELVYGKAEIAVAPLTI 420
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 421 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 477
Query: 454 VWVLEHRVN---------EDFR-GPAR---HQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + ED + GP+ ++ G S WFS F Q+ IS +L
Sbjct: 478 VLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSL 535
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 536 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSG 592
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 593 STKEF-FRRSKIAVY 606
Score = 157 (60.3 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 67/230 (29%), Positives = 108/230 (46%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 507 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 564
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY ++ + E +
Sbjct: 565 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWTYMKSAEPSV 620
Query: 580 FQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSP 631
F + +A G + +A LL I Q TM V + G+G A P SP
Sbjct: 621 FTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSP 680
Query: 632 LVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC-P-DAGTVVSARSLGLNS 679
L V+ A+L ++E + ++++ W+ C P D+G+ +L L++
Sbjct: 681 LRTPVNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSN 730
Score = 87 (35.7 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 50/260 (19%), Positives = 99/260 (38%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GA+ +++ + W V +Y D G ++ ++ + +V ++ D +
Sbjct: 57 GALLSLLDHYEWNRFVFLY-DTDRGYSILQAIMEKAGQNSWQVS--AICVENFNDASYRR 113
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L L Q + F++ + E+ +G KG +I+ + G ++ +LE +
Sbjct: 114 LLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVANLGFKDI--SLERFMH 171
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
V G + T + RWK+ +E P + L YD +A
Sbjct: 172 GGAN-VTGFQLVDFSTPMVTKLMQRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETF 229
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQS 247
+ + + A Q G + + L +R +GLTG+ F G+ +
Sbjct: 230 RNLRRQKIDISRRGNAGDCLANPAAPWGQ-GIDMERTLKQVRIQGLTGNVQFDHYGRRVN 288
Query: 248 SAFEIINVNN-GARGVGFWS 266
++ + N G R VG+W+
Sbjct: 289 YTMDVFELKNTGPRKVGYWN 308
Score = 37 (18.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 405 FTLPY-TESGVSMIVPIKDSKKRNAW 429
F Y T+ G S++ I + +N+W
Sbjct: 71 FVFLYDTDRGYSILQAIMEKAGQNSW 96
>UNIPROTKB|F1N982 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00821478 ProteinModelPortal:F1N982
Ensembl:ENSGALT00000036434 Uniprot:F1N982
Length = 819
Score = 198 (74.8 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 73/255 (28%), Positives = 119/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + VP Y D + +N ++ ++ G+ + V TI
Sbjct: 362 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETK-IWNGMVGELVYGKAEIAVAPLTI 420
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 421 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 477
Query: 454 VWVLEHRVN---------EDFR-GPAR---HQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + ED + GP+ ++ G S WFS F Q+ IS +L
Sbjct: 478 VLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSL 535
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 536 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSG 592
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 593 STKEF-FRRSKIAVY 606
Score = 152 (58.6 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 63/216 (29%), Positives = 99/216 (45%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 507 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 564
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY ++ + E +
Sbjct: 565 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWTYMKSAEPSV 620
Query: 580 FQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSP 631
F + +A G + +A LL I Q TM V + G+G A P SP
Sbjct: 621 FTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSP 680
Query: 632 LVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
L + V+ A+L + E + ++++ W+ C G
Sbjct: 681 LRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 716
Score = 87 (35.7 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 50/260 (19%), Positives = 99/260 (38%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GA+ +++ + W V +Y D G ++ ++ + +V ++ D +
Sbjct: 57 GALLSLLDHYEWNRFVFLY-DTDRGYSILQAIMEKAGQNSWQVS--AICVENFNDASYRR 113
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L L Q + F++ + E+ +G KG +I+ + G ++ +LE +
Sbjct: 114 LLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVANLGFKDI--SLERFMH 171
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
V G + T + RWK+ +E P + L YD +A
Sbjct: 172 GGAN-VTGFQLVDFSTPMVTKLMQRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETF 229
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQS 247
+ + + A Q G + + L +R +GLTG+ F G+ +
Sbjct: 230 RNLRRQKIDISRRGNAGDCLANPAAPWGQ-GIDMERTLKQVRIQGLTGNVQFDHYGRRVN 288
Query: 248 SAFEIINVNN-GARGVGFWS 266
++ + N G R VG+W+
Sbjct: 289 YTMDVFELKNTGPRKVGYWN 308
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 405 FTLPY-TESGVSMIVPIKDSKKRNAW 429
F Y T+ G S++ I + +N+W
Sbjct: 71 FVFLYDTDRGYSILQAIMEKAGQNSW 96
>UNIPROTKB|F1PDP9 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2890 KO:K05197 OMA:ARIMQQW EMBL:AAEX03003077
RefSeq:XP_853398.1 ProteinModelPortal:F1PDP9
Ensembl:ENSCAFT00000028256 GeneID:489168 KEGG:cfa:489168
Uniprot:F1PDP9
Length = 906
Score = 198 (74.8 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 70/255 (27%), Positives = 118/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y+ + V Y D + ++N ++ ++ G D V TI
Sbjct: 437 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 495
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 552
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F ++ G S WFS F Q+ IS +L
Sbjct: 553 VLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSL 610
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 611 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAG 667
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ V+
Sbjct: 668 STKEF-FRRSKIAVF 681
Score = 146 (56.5 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 590 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 647
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V+ ++ + E +F + + G
Sbjct: 648 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 703
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
I + YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 704 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 763
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 764 VLKLNEQGLLDKLKNKWWYDKGECGSGG 791
Score = 88 (36.0 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 61/274 (22%), Positives = 117/274 (42%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 187
Query: 71 LYK-LFTMQTRVFIL-----HMLPSLGSRIFEKANEIG----LMNKGCVWI----MTDGM 116
L++ L + R+ ++ + LG I + N IG L N G + I +
Sbjct: 188 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 247
Query: 117 TNLLRTLEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLL 176
N+ + TD++ I ++ + + A ++ RV WKR P A L
Sbjct: 248 ANVTGFQLVNYTDTIPAKI-MQQW-KNSDARDHTRVDWKR------PKYTSA-------L 292
Query: 177 AYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTG 236
YD +A A + + + + A Q G + +AL +RF GLTG
Sbjct: 293 TYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLTG 351
Query: 237 DYIFVD-GQLQSSAFEIINV-NNGARGVGFWSPE 268
+ F + G+ + +I + ++G R +G+W+ +
Sbjct: 352 NVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 385
Score = 44 (20.5 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 26 PIYVDNQYGEELIPSLTDALQAI 48
P+ NQ+ +L P L DAL +I
Sbjct: 114 PVDTSNQFVLQLRPELQDALISI 136
>UNIPROTKB|P42261 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0007616 "long-term memory" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0032590 "dendrite membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030425 "dendrite"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0008066 "glutamate
receptor activity" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] [GO:0009986 "cell
surface" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0044309 "neuron spine" evidence=ISS] [GO:0030165
"PDZ domain binding" evidence=ISS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0014069 GO:GO:0009986 EMBL:CH471062 GO:GO:0005789
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0007616 DrugBank:DB00142 GO:GO:0030288
GO:GO:0032281 GO:GO:0031623 GO:GO:0030165 GO:GO:0032590
DrugBank:DB01159 InterPro:IPR001828 DrugBank:DB01189
DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028 DrugBank:DB01236
GO:GO:0030666 Pathway_Interaction_DB:ephbfwdpathway
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234372 EMBL:M64752 EMBL:X58633 EMBL:M81886
EMBL:AK295039 EMBL:AK295827 EMBL:AC010613 EMBL:AC025156
EMBL:AC091960 EMBL:AC091962 EMBL:BC111734 IPI:IPI00030880
IPI:IPI00219124 PIR:A40222 PIR:A41273 PIR:S25852 PIR:S38723
RefSeq:NP_000818.2 RefSeq:NP_001107655.1 RefSeq:NP_001244948.1
RefSeq:NP_001244950.1 RefSeq:NP_001244952.1 UniGene:Hs.519693
UniGene:Hs.737709 ProteinModelPortal:P42261 SMR:P42261
DIP:DIP-41487N MINT:MINT-271172 STRING:P42261 PhosphoSite:P42261
DMDM:116242505 PaxDb:P42261 PRIDE:P42261 Ensembl:ENST00000285900
Ensembl:ENST00000340592 Ensembl:ENST00000518142
Ensembl:ENST00000544403 Ensembl:ENST00000544794 GeneID:2890
KEGG:hsa:2890 UCSC:uc003luy.4 UCSC:uc003lva.4 CTD:2890
GeneCards:GC05P152850 H-InvDB:HIX0032120 HGNC:HGNC:4571
HPA:CAB001965 MIM:138248 neXtProt:NX_P42261 PharmGKB:PA28966
HOVERGEN:HBG051839 KO:K05197 OrthoDB:EOG479F6B PhylomeDB:P42261
BindingDB:P42261 ChEMBL:CHEMBL2009 GenomeRNAi:2890 NextBio:11425
ArrayExpress:P42261 Bgee:P42261 CleanEx:HS_GRIA1
Genevestigator:P42261 GermOnline:ENSG00000155511 GO:GO:0015277
Uniprot:P42261
Length = 906
Score = 198 (74.8 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 70/255 (27%), Positives = 118/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y+ + V Y D + ++N ++ ++ G D V TI
Sbjct: 437 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 495
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 552
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F ++ G S WFS F Q+ IS +L
Sbjct: 553 VLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSL 610
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 611 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAG 667
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ V+
Sbjct: 668 STKEF-FRRSKIAVF 681
Score = 146 (56.5 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 590 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 647
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V+ ++ + E +F + + G
Sbjct: 648 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 703
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
I + YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 704 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 763
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 764 VLKLNEQGLLDKLKNKWWYDKGECGSGG 791
Score = 88 (36.0 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 61/274 (22%), Positives = 117/274 (42%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 187
Query: 71 LYK-LFTMQTRVFIL-----HMLPSLGSRIFEKANEIG----LMNKGCVWI----MTDGM 116
L++ L + R+ ++ + LG I + N IG L N G + I +
Sbjct: 188 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 247
Query: 117 TNLLRTLEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLL 176
N+ + TD++ I ++ + + A ++ RV WKR P A L
Sbjct: 248 ANVTGFQLVNYTDTIPAKI-MQQW-KNSDARDHTRVDWKR------PKYTSA-------L 292
Query: 177 AYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTG 236
YD +A A + + + + A Q G + +AL +RF GLTG
Sbjct: 293 TYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLTG 351
Query: 237 DYIFVD-GQLQSSAFEIINV-NNGARGVGFWSPE 268
+ F + G+ + +I + ++G R +G+W+ +
Sbjct: 352 NVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 385
Score = 44 (20.5 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 26 PIYVDNQYGEELIPSLTDALQAI 48
P+ NQ+ +L P L DAL +I
Sbjct: 114 PVDTSNQFVLQLRPELQDALISI 136
>UNIPROTKB|Q38PU8 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9541 "Macaca
fascicularis" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0014069
"postsynaptic density" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0043197 "dendritic
spine" evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0005789 GO:GO:0030054 GO:GO:0045211
GO:GO:0030288 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 EMBL:DQ159929 HSSP:P19491
ProteinModelPortal:Q38PU8 SMR:Q38PU8 Uniprot:Q38PU8
Length = 906
Score = 198 (74.8 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 70/255 (27%), Positives = 118/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y+ + V Y D + ++N ++ ++ G D V TI
Sbjct: 437 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 495
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 552
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F ++ G S WFS F Q+ IS +L
Sbjct: 553 VLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSL 610
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 611 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAG 667
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ V+
Sbjct: 668 STKEF-FRRSKIAVF 681
Score = 146 (56.5 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 590 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 647
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V+ ++ + E +F + + G
Sbjct: 648 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 703
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
I + YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 704 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 763
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 764 VLKLNEQGLLDKLKNKWWYDKGECGSGG 791
Score = 88 (36.0 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 61/274 (22%), Positives = 117/274 (42%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 187
Query: 71 LYK-LFTMQTRVFIL-----HMLPSLGSRIFEKANEIG----LMNKGCVWI----MTDGM 116
L++ L + R+ ++ + LG I + N IG L N G + I +
Sbjct: 188 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 247
Query: 117 TNLLRTLEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLL 176
N+ + TD++ I ++ + + A ++ RV WKR P A L
Sbjct: 248 ANVTGFQLVNYTDTIPAKI-MQQW-KNSDARDHTRVDWKR------PKYTSA-------L 292
Query: 177 AYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTG 236
YD +A A + + + + A Q G + +AL +RF GLTG
Sbjct: 293 TYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLTG 351
Query: 237 DYIFVD-GQLQSSAFEIINV-NNGARGVGFWSPE 268
+ F + G+ + +I + ++G R +G+W+ +
Sbjct: 352 NVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 385
Score = 44 (20.5 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 26 PIYVDNQYGEELIPSLTDALQAI 48
P+ NQ+ +L P L DAL +I
Sbjct: 114 PVDTSNQFVLQLRPELQDALISI 136
>UNIPROTKB|G3V914 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 EMBL:CH473976 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 UniGene:Rn.91361
ProteinModelPortal:G3V914 Ensembl:ENSRNOT00000039587 Uniprot:G3V914
Length = 883
Score = 189 (71.6 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 69/256 (26%), Positives = 117/256 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D + TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 559
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F + ++ G S WFS F Q+ IS +L
Sbjct: 560 VLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 617
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 618 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSG 674
Query: 556 ILKQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 675 STKEF-FRRSKIAVFD 689
Score = 145 (56.1 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 64/222 (28%), Positives = 104/222 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 597 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 654
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V++ ++ E +F + +A G
Sbjct: 655 ESAEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEG 710
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ YA LL I Q TM V + G+G A P S L V+ A
Sbjct: 711 VARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLA 770
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSC--PDAGTVVSARSLGLNS 679
+L ++E + ++++ W+ C D+G+ +L L++
Sbjct: 771 VLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 812
Score = 97 (39.2 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 56/266 (21%), Positives = 110/266 (41%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 249
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P A + L YDA
Sbjct: 250 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQ 305
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 306 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 364
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 365 NGKRINYTINIMELKTNGPRKIGYWS 390
>MGI|MGI:95809 [details] [associations]
symbol:Gria2 "glutamate receptor, ionotropic, AMPA2 (alpha 2)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0004872 "receptor activity"
evidence=ISO] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO;IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=ISO;IDA] [GO:0008021 "synaptic
vesicle" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030672 "synaptic vesicle membrane" evidence=ISO]
[GO:0031623 "receptor internalization" evidence=ISO] [GO:0032279
"asymmetric synapse" evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032839 "dendrite
cytoplasm" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IDA] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043197 "dendritic spine"
evidence=ISO] [GO:0043198 "dendritic shaft" evidence=ISO]
[GO:0043204 "perikaryon" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0045184 "establishment of protein
localization" evidence=ISO] [GO:0045202 "synapse" evidence=ISO;IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051966
"regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95809 GO:GO:0005789
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0043005 GO:GO:0032281 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2891 KO:K05198 OrthoDB:EOG4TB49K EMBL:X57498
EMBL:L32204 EMBL:L32189 EMBL:L32190 EMBL:L32192 EMBL:L32194
EMBL:L32196 EMBL:L32198 EMBL:L32200 EMBL:L32202 EMBL:L32203
EMBL:L32201 EMBL:L32199 EMBL:L32197 EMBL:L32195 EMBL:L32193
EMBL:L32191 EMBL:L32372 EMBL:AK014389 EMBL:AK043490 EMBL:AK044574
EMBL:AK046861 IPI:IPI00136967 IPI:IPI00466699 IPI:IPI00608015
IPI:IPI00845711 PIR:I49695 PIR:I49696 RefSeq:NP_001034284.1
RefSeq:NP_001077275.1 RefSeq:NP_038568.2 UniGene:Mm.220224
ProteinModelPortal:P23819 SMR:P23819 IntAct:P23819
MINT:MINT-1776844 STRING:P23819 PhosphoSite:P23819 PaxDb:P23819
PRIDE:P23819 GeneID:14800 KEGG:mmu:14800 UCSC:uc008pnz.1
UCSC:uc008pof.1 BindingDB:P23819 ChEMBL:CHEMBL3205 NextBio:286957
CleanEx:MM_GRIA2 Genevestigator:P23819
GermOnline:ENSMUSG00000033981 Uniprot:P23819
Length = 883
Score = 189 (71.6 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 69/256 (26%), Positives = 117/256 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D + TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 559
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F + ++ G S WFS F Q+ IS +L
Sbjct: 560 VLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 617
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 618 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSG 674
Query: 556 ILKQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 675 STKEF-FRRSKIAVFD 689
Score = 142 (55.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 597 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 654
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V++ ++ E +F + +A G
Sbjct: 655 ESAEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEG 710
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 711 VARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLA 770
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 771 VLKLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 97 (39.2 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 56/266 (21%), Positives = 110/266 (41%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 249
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P A + L YDA
Sbjct: 250 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQ 305
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 306 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 364
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 365 NGKRINYTINIMELKTNGPRKIGYWS 390
>RGD|61862 [details] [associations]
symbol:Gria2 "glutamate receptor, ionotropic, AMPA 2"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO;IDA;TAS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;ISO] [GO:0005246 "calcium channel regulator activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=ISO;IDA] [GO:0008021 "synaptic
vesicle" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=TAS] [GO:0010226 "response to lithium ion"
evidence=IEP] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IDA;IPI]
[GO:0030425 "dendrite" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030672 "synaptic vesicle membrane" evidence=IDA]
[GO:0031623 "receptor internalization" evidence=IDA] [GO:0032279
"asymmetric synapse" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032839 "dendrite
cytoplasm" evidence=IDA] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;ISS] [GO:0042734 "presynaptic membrane"
evidence=IDA] [GO:0043005 "neuron projection" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043198 "dendritic shaft" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA;IPI]
[GO:0045184 "establishment of protein localization" evidence=IMP]
[GO:0045202 "synapse" evidence=ISO;IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0051262 "protein tetramerization"
evidence=IDA] [GO:0051966 "regulation of synaptic transmission,
glutamatergic" evidence=IMP] [GO:0060992 "response to fungicide"
evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0014069
GO:GO:0051262 GO:GO:0005789 GO:GO:0060992 GO:GO:0010226
GO:GO:0007268 GO:GO:0043198 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0032279 GO:GO:0042734 GO:GO:0043195
GO:GO:0030672 GO:GO:0032281 GO:GO:0030426 GO:GO:0045184
GO:GO:0031623 GO:GO:0001919 GO:GO:0032839 GO:GO:0030165
InterPro:IPR001828 DrugBank:DB00606 GO:GO:0050806 GO:GO:0051966
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 CTD:2891 KO:K05198 EMBL:M36419
EMBL:M38061 EMBL:M85035 EMBL:X54655 EMBL:AF164344 IPI:IPI00231061
IPI:IPI00324625 IPI:IPI00876626 PIR:S13677 RefSeq:NP_001077280.1
RefSeq:NP_058957.1 UniGene:Rn.91361 PDB:1FTJ PDB:1FTK PDB:1FTL
PDB:1FTM PDB:1FTO PDB:1FW0 PDB:1GR2 PDB:1LB8 PDB:1LB9 PDB:1LBB
PDB:1LBC PDB:1M5B PDB:1M5C PDB:1M5D PDB:1M5E PDB:1M5F PDB:1MM6
PDB:1MM7 PDB:1MQD PDB:1MQG PDB:1MQH PDB:1MQI PDB:1MQJ PDB:1MS7
PDB:1MXU PDB:1MXV PDB:1MXW PDB:1MXX PDB:1MXY PDB:1MXZ PDB:1MY0
PDB:1MY1 PDB:1MY2 PDB:1MY3 PDB:1MY4 PDB:1N0T PDB:1NNK PDB:1NNP
PDB:1P1N PDB:1P1O PDB:1P1Q PDB:1P1U PDB:1P1W PDB:1SYH PDB:1SYI
PDB:1WVJ PDB:1XHY PDB:2AIX PDB:2AL4 PDB:2AL5 PDB:2ANJ PDB:2CMO
PDB:2GFE PDB:2I3V PDB:2I3W PDB:2P2A PDB:2UXA PDB:2XX7 PDB:2XX8
PDB:2XX9 PDB:2XXH PDB:2XXI PDB:3B6Q PDB:3B6T PDB:3B6W PDB:3B7D
PDB:3BBR PDB:3BFT PDB:3BFU PDB:3BKI PDB:3DP6 PDB:3H03 PDB:3H06
PDB:3H5V PDB:3H5W PDB:3H6T PDB:3H6U PDB:3H6V PDB:3H6W PDB:3HSY
PDB:3IJO PDB:3IJX PDB:3IK6 PDB:3IL1 PDB:3ILT PDB:3ILU PDB:3KG2
PDB:3KGC PDB:3LSF PDB:3LSL PDB:3M3L PDB:3N6V PDB:3O28 PDB:3O29
PDB:3O2A PDB:3O2J PDB:3O6G PDB:3O6H PDB:3O6I PDB:3PD8 PDB:3PD9
PDB:3PMV PDB:3PMW PDB:3PMX PDB:3RTF PDB:3RTW PDB:3T93 PDB:3T96
PDB:3T9H PDB:3T9U PDB:3T9V PDB:3T9X PDB:3TDJ PDB:3TKD PDB:3TZA
PDB:4FAT PDB:4G8M PDB:4GXS PDBsum:1FTJ PDBsum:1FTK PDBsum:1FTL
PDBsum:1FTM PDBsum:1FTO PDBsum:1FW0 PDBsum:1GR2 PDBsum:1LB8
PDBsum:1LB9 PDBsum:1LBB PDBsum:1LBC PDBsum:1M5B PDBsum:1M5C
PDBsum:1M5D PDBsum:1M5E PDBsum:1M5F PDBsum:1MM6 PDBsum:1MM7
PDBsum:1MQD PDBsum:1MQG PDBsum:1MQH PDBsum:1MQI PDBsum:1MQJ
PDBsum:1MS7 PDBsum:1MXU PDBsum:1MXV PDBsum:1MXW PDBsum:1MXX
PDBsum:1MXY PDBsum:1MXZ PDBsum:1MY0 PDBsum:1MY1 PDBsum:1MY2
PDBsum:1MY3 PDBsum:1MY4 PDBsum:1N0T PDBsum:1NNK PDBsum:1NNP
PDBsum:1P1N PDBsum:1P1O PDBsum:1P1Q PDBsum:1P1U PDBsum:1P1W
PDBsum:1SYH PDBsum:1SYI PDBsum:1WVJ PDBsum:1XHY PDBsum:2AIX
PDBsum:2AL4 PDBsum:2AL5 PDBsum:2ANJ PDBsum:2CMO PDBsum:2GFE
PDBsum:2I3V PDBsum:2I3W PDBsum:2P2A PDBsum:2UXA PDBsum:2XX7
PDBsum:2XX8 PDBsum:2XX9 PDBsum:2XXH PDBsum:2XXI PDBsum:3B6Q
PDBsum:3B6T PDBsum:3B6W PDBsum:3B7D PDBsum:3BBR PDBsum:3BFT
PDBsum:3BFU PDBsum:3BKI PDBsum:3DP6 PDBsum:3H03 PDBsum:3H06
PDBsum:3H5V PDBsum:3H5W PDBsum:3H6T PDBsum:3H6U PDBsum:3H6V
PDBsum:3H6W PDBsum:3HSY PDBsum:3IJO PDBsum:3IJX PDBsum:3IK6
PDBsum:3IL1 PDBsum:3ILT PDBsum:3ILU PDBsum:3KG2 PDBsum:3KGC
PDBsum:3LSF PDBsum:3LSL PDBsum:3M3L PDBsum:3N6V PDBsum:3O28
PDBsum:3O29 PDBsum:3O2A PDBsum:3O2J PDBsum:3O6G PDBsum:3O6H
PDBsum:3O6I PDBsum:3PD8 PDBsum:3PD9 PDBsum:3PMV PDBsum:3PMW
PDBsum:3PMX PDBsum:3RTF PDBsum:3RTW PDBsum:3T93 PDBsum:3T96
PDBsum:3T9H PDBsum:3T9U PDBsum:3T9V PDBsum:3T9X PDBsum:3TDJ
PDBsum:3TKD PDBsum:3TZA PDBsum:4FAT PDBsum:4G8M PDBsum:4GXS
ProteinModelPortal:P19491 SMR:P19491 DIP:DIP-30952N IntAct:P19491
MINT:MINT-86056 STRING:P19491 PhosphoSite:P19491 PRIDE:P19491
GeneID:29627 KEGG:rno:29627 UCSC:RGD:61862 BindingDB:P19491
ChEMBL:CHEMBL3503 EvolutionaryTrace:P19491 NextBio:609842
ArrayExpress:P19491 Genevestigator:P19491
GermOnline:ENSRNOG00000028589 Uniprot:P19491
Length = 883
Score = 189 (71.6 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 69/256 (26%), Positives = 117/256 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D + TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 559
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F + ++ G S WFS F Q+ IS +L
Sbjct: 560 VLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 617
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 618 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSG 674
Query: 556 ILKQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 675 STKEF-FRRSKIAVFD 689
Score = 142 (55.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 597 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 654
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V++ ++ E +F + +A G
Sbjct: 655 ESAEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEG 710
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 711 VARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLA 770
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 771 VLKLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 97 (39.2 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 56/266 (21%), Positives = 110/266 (41%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 249
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P A + L YDA
Sbjct: 250 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQ 305
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 306 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 364
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 365 NGKRINYTINIMELKTNGPRKIGYWS 390
>UNIPROTKB|G3V938 [details] [associations]
symbol:Gria2 "Glutamate receptor, ionotropic, AMPA2,
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
EMBL:CH473976 GO:GO:0005234 GO:GO:0004970 UniGene:Rn.91361
ProteinModelPortal:G3V938 Ensembl:ENSRNOT00000039610 Uniprot:G3V938
Length = 883
Score = 189 (71.6 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 69/256 (26%), Positives = 117/256 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D + TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 559
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F + ++ G S WFS F Q+ IS +L
Sbjct: 560 VLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 617
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 618 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSG 674
Query: 556 ILKQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 675 STKEF-FRRSKIAVFD 689
Score = 142 (55.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 597 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 654
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V++ ++ E +F + +A G
Sbjct: 655 ESAEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEG 710
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 711 VARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLA 770
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 771 VLKLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 97 (39.2 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 56/266 (21%), Positives = 110/266 (41%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 249
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P A + L YDA
Sbjct: 250 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQ 305
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 306 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 364
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 365 NGKRINYTINIMELKTNGPRKIGYWS 390
>UNIPROTKB|P19491 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0014069 GO:GO:0051262
GO:GO:0005789 GO:GO:0060992 GO:GO:0010226 GO:GO:0007268
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0032279 GO:GO:0042734 GO:GO:0043195 GO:GO:0030672
GO:GO:0032281 GO:GO:0030426 GO:GO:0045184 GO:GO:0031623
GO:GO:0001919 GO:GO:0032839 GO:GO:0030165 InterPro:IPR001828
DrugBank:DB00606 GO:GO:0050806 GO:GO:0051966 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2891 KO:K05198 EMBL:M36419 EMBL:M38061
EMBL:M85035 EMBL:X54655 EMBL:AF164344 IPI:IPI00231061
IPI:IPI00324625 IPI:IPI00876626 PIR:S13677 RefSeq:NP_001077280.1
RefSeq:NP_058957.1 UniGene:Rn.91361 PDB:1FTJ PDB:1FTK PDB:1FTL
PDB:1FTM PDB:1FTO PDB:1FW0 PDB:1GR2 PDB:1LB8 PDB:1LB9 PDB:1LBB
PDB:1LBC PDB:1M5B PDB:1M5C PDB:1M5D PDB:1M5E PDB:1M5F PDB:1MM6
PDB:1MM7 PDB:1MQD PDB:1MQG PDB:1MQH PDB:1MQI PDB:1MQJ PDB:1MS7
PDB:1MXU PDB:1MXV PDB:1MXW PDB:1MXX PDB:1MXY PDB:1MXZ PDB:1MY0
PDB:1MY1 PDB:1MY2 PDB:1MY3 PDB:1MY4 PDB:1N0T PDB:1NNK PDB:1NNP
PDB:1P1N PDB:1P1O PDB:1P1Q PDB:1P1U PDB:1P1W PDB:1SYH PDB:1SYI
PDB:1WVJ PDB:1XHY PDB:2AIX PDB:2AL4 PDB:2AL5 PDB:2ANJ PDB:2CMO
PDB:2GFE PDB:2I3V PDB:2I3W PDB:2P2A PDB:2UXA PDB:2XX7 PDB:2XX8
PDB:2XX9 PDB:2XXH PDB:2XXI PDB:3B6Q PDB:3B6T PDB:3B6W PDB:3B7D
PDB:3BBR PDB:3BFT PDB:3BFU PDB:3BKI PDB:3DP6 PDB:3H03 PDB:3H06
PDB:3H5V PDB:3H5W PDB:3H6T PDB:3H6U PDB:3H6V PDB:3H6W PDB:3HSY
PDB:3IJO PDB:3IJX PDB:3IK6 PDB:3IL1 PDB:3ILT PDB:3ILU PDB:3KG2
PDB:3KGC PDB:3LSF PDB:3LSL PDB:3M3L PDB:3N6V PDB:3O28 PDB:3O29
PDB:3O2A PDB:3O2J PDB:3O6G PDB:3O6H PDB:3O6I PDB:3PD8 PDB:3PD9
PDB:3PMV PDB:3PMW PDB:3PMX PDB:3RTF PDB:3RTW PDB:3T93 PDB:3T96
PDB:3T9H PDB:3T9U PDB:3T9V PDB:3T9X PDB:3TDJ PDB:3TKD PDB:3TZA
PDB:4FAT PDB:4G8M PDB:4GXS PDBsum:1FTJ PDBsum:1FTK PDBsum:1FTL
PDBsum:1FTM PDBsum:1FTO PDBsum:1FW0 PDBsum:1GR2 PDBsum:1LB8
PDBsum:1LB9 PDBsum:1LBB PDBsum:1LBC PDBsum:1M5B PDBsum:1M5C
PDBsum:1M5D PDBsum:1M5E PDBsum:1M5F PDBsum:1MM6 PDBsum:1MM7
PDBsum:1MQD PDBsum:1MQG PDBsum:1MQH PDBsum:1MQI PDBsum:1MQJ
PDBsum:1MS7 PDBsum:1MXU PDBsum:1MXV PDBsum:1MXW PDBsum:1MXX
PDBsum:1MXY PDBsum:1MXZ PDBsum:1MY0 PDBsum:1MY1 PDBsum:1MY2
PDBsum:1MY3 PDBsum:1MY4 PDBsum:1N0T PDBsum:1NNK PDBsum:1NNP
PDBsum:1P1N PDBsum:1P1O PDBsum:1P1Q PDBsum:1P1U PDBsum:1P1W
PDBsum:1SYH PDBsum:1SYI PDBsum:1WVJ PDBsum:1XHY PDBsum:2AIX
PDBsum:2AL4 PDBsum:2AL5 PDBsum:2ANJ PDBsum:2CMO PDBsum:2GFE
PDBsum:2I3V PDBsum:2I3W PDBsum:2P2A PDBsum:2UXA PDBsum:2XX7
PDBsum:2XX8 PDBsum:2XX9 PDBsum:2XXH PDBsum:2XXI PDBsum:3B6Q
PDBsum:3B6T PDBsum:3B6W PDBsum:3B7D PDBsum:3BBR PDBsum:3BFT
PDBsum:3BFU PDBsum:3BKI PDBsum:3DP6 PDBsum:3H03 PDBsum:3H06
PDBsum:3H5V PDBsum:3H5W PDBsum:3H6T PDBsum:3H6U PDBsum:3H6V
PDBsum:3H6W PDBsum:3HSY PDBsum:3IJO PDBsum:3IJX PDBsum:3IK6
PDBsum:3IL1 PDBsum:3ILT PDBsum:3ILU PDBsum:3KG2 PDBsum:3KGC
PDBsum:3LSF PDBsum:3LSL PDBsum:3M3L PDBsum:3N6V PDBsum:3O28
PDBsum:3O29 PDBsum:3O2A PDBsum:3O2J PDBsum:3O6G PDBsum:3O6H
PDBsum:3O6I PDBsum:3PD8 PDBsum:3PD9 PDBsum:3PMV PDBsum:3PMW
PDBsum:3PMX PDBsum:3RTF PDBsum:3RTW PDBsum:3T93 PDBsum:3T96
PDBsum:3T9H PDBsum:3T9U PDBsum:3T9V PDBsum:3T9X PDBsum:3TDJ
PDBsum:3TKD PDBsum:3TZA PDBsum:4FAT PDBsum:4G8M PDBsum:4GXS
ProteinModelPortal:P19491 SMR:P19491 DIP:DIP-30952N IntAct:P19491
MINT:MINT-86056 STRING:P19491 PhosphoSite:P19491 PRIDE:P19491
GeneID:29627 KEGG:rno:29627 UCSC:RGD:61862 BindingDB:P19491
ChEMBL:CHEMBL3503 EvolutionaryTrace:P19491 NextBio:609842
ArrayExpress:P19491 Genevestigator:P19491
GermOnline:ENSRNOG00000028589 Uniprot:P19491
Length = 883
Score = 189 (71.6 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 69/256 (26%), Positives = 117/256 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D + TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 559
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F + ++ G S WFS F Q+ IS +L
Sbjct: 560 VLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 617
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 618 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSG 674
Query: 556 ILKQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 675 STKEF-FRRSKIAVFD 689
Score = 142 (55.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 597 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 654
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V++ ++ E +F + +A G
Sbjct: 655 ESAEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEG 710
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 711 VARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLA 770
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 771 VLKLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 97 (39.2 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 56/266 (21%), Positives = 110/266 (41%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 249
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P A + L YDA
Sbjct: 250 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQ 305
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 306 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 364
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 365 NGKRINYTINIMELKTNGPRKIGYWS 390
>UNIPROTKB|F1N3G8 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032590
"dendrite membrane" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0007616
"long-term memory" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0009986
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0007616 GO:GO:0030288 GO:GO:0032281
GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234 CTD:2890
KO:K05197 OMA:ARIMQQW EMBL:DAAA02020690 EMBL:DAAA02020691
EMBL:DAAA02020692 EMBL:DAAA02020693 EMBL:DAAA02020694
EMBL:DAAA02020695 EMBL:DAAA02020696 EMBL:DAAA02020697
EMBL:DAAA02020698 EMBL:DAAA02020699 EMBL:DAAA02020700
EMBL:DAAA02020701 EMBL:DAAA02020702 IPI:IPI01000809
RefSeq:XP_002704933.2 UniGene:Bt.110838 Ensembl:ENSBTAT00000007628
GeneID:529618 KEGG:bta:529618 Uniprot:F1N3G8
Length = 837
Score = 198 (74.8 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 70/255 (27%), Positives = 118/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y+ + V Y D + ++N ++ ++ G D V TI
Sbjct: 368 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 426
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 427 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 483
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F ++ G S WFS F Q+ IS +L
Sbjct: 484 VLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSL 541
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 542 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAG 598
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ V+
Sbjct: 599 STKEF-FRRSKIAVF 612
Score = 146 (56.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 521 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 578
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V+ ++ + E +F + + G
Sbjct: 579 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 634
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
I + YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 635 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 694
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 695 VLKLNEQGLLDKLKNKWWYDKGECGSGG 722
Score = 87 (35.7 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 60/274 (21%), Positives = 117/274 (42%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 63 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 118
Query: 71 LYK-LFTMQTRVFIL-----HMLPSLGSRIFEKANEIG----LMNKGCVWI----MTDGM 116
L++ L + R+ ++ + LG + + N IG L N G + I +
Sbjct: 119 LFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGFMDIDLNKFKESG 178
Query: 117 TNLLRTLEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLL 176
N+ + TD++ I ++ + + A ++ RV WKR P A L
Sbjct: 179 ANVTGFQLVNYTDTIPAKI-MQQW-KNSDARDHTRVDWKR------PKYTSA-------L 223
Query: 177 AYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTG 236
YD +A A + + + + A Q G + +AL +RF GLTG
Sbjct: 224 TYDGVKVMAEAFQNLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLTG 282
Query: 237 DYIFVD-GQLQSSAFEIINV-NNGARGVGFWSPE 268
+ F + G+ + +I + ++G R +G+W+ +
Sbjct: 283 NVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 316
Score = 44 (20.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 26 PIYVDNQYGEELIPSLTDALQAI 48
P+ NQ+ +L P L DAL +I
Sbjct: 45 PVDTSNQFVLQLRPELQDALISI 67
>UNIPROTKB|B7Z9G9 [details] [associations]
symbol:GRIA1 "cDNA, FLJ78833, highly similar to Glutamate
receptor 1" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 EMBL:AC010613 EMBL:AC025156
EMBL:AC091960 EMBL:AC091962 RefSeq:NP_001244950.1 UniGene:Hs.519693
UniGene:Hs.737709 GeneID:2890 KEGG:hsa:2890 CTD:2890 HGNC:HGNC:4571
HOVERGEN:HBG051839 KO:K05197 EMBL:AK315934 IPI:IPI00978580
RefSeq:NP_001244951.1 SMR:B7Z9G9 STRING:B7Z9G9
Ensembl:ENST00000448073 UCSC:uc011dcy.2 Uniprot:B7Z9G9
Length = 916
Score = 198 (74.8 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 70/255 (27%), Positives = 118/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y+ + V Y D + ++N ++ ++ G D V TI
Sbjct: 447 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 505
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 506 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 562
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F ++ G S WFS F Q+ IS +L
Sbjct: 563 VLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSL 620
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 621 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAG 677
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ V+
Sbjct: 678 STKEF-FRRSKIAVF 691
Score = 146 (56.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 64/222 (28%), Positives = 103/222 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 600 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 657
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V+ ++ + E +F + + G
Sbjct: 658 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 713
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
I + YA LL I Q TM V + G+G A P S L V+ A
Sbjct: 714 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLA 773
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSC--PDAGTVVSARSLGLNS 679
+L ++E + +++ W+ C D+G+ +L L++
Sbjct: 774 VLKLSEQGVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSN 815
Score = 88 (36.0 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 61/274 (22%), Positives = 117/274 (42%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 142 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 197
Query: 71 LYK-LFTMQTRVFIL-----HMLPSLGSRIFEKANEIG----LMNKGCVWI----MTDGM 116
L++ L + R+ ++ + LG I + N IG L N G + I +
Sbjct: 198 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 257
Query: 117 TNLLRTLEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLL 176
N+ + TD++ I ++ + + A ++ RV WKR P A L
Sbjct: 258 ANVTGFQLVNYTDTIPAKI-MQQW-KNSDARDHTRVDWKR------PKYTSA-------L 302
Query: 177 AYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTG 236
YD +A A + + + + A Q G + +AL +RF GLTG
Sbjct: 303 TYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLTG 361
Query: 237 DYIFVD-GQLQSSAFEIINV-NNGARGVGFWSPE 268
+ F + G+ + +I + ++G R +G+W+ +
Sbjct: 362 NVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 395
Score = 44 (20.5 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 26 PIYVDNQYGEELIPSLTDALQAI 48
P+ NQ+ +L P L DAL +I
Sbjct: 124 PVDTSNQFVLQLRPELQDALISI 146
>UNIPROTKB|E7ESV8 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC010613 EMBL:AC025156 EMBL:AC091960
EMBL:AC091962 RefSeq:NP_001244950.1 UniGene:Hs.519693
UniGene:Hs.737709 GeneID:2890 KEGG:hsa:2890 CTD:2890 HGNC:HGNC:4571
KO:K05197 OMA:ARIMQQW IPI:IPI00978580 ProteinModelPortal:E7ESV8
SMR:E7ESV8 Ensembl:ENST00000518783 UCSC:uc011dcz.2
ArrayExpress:E7ESV8 Bgee:E7ESV8 Uniprot:E7ESV8
Length = 916
Score = 198 (74.8 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 70/255 (27%), Positives = 118/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y+ + V Y D + ++N ++ ++ G D V TI
Sbjct: 447 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 505
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 506 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 562
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F ++ G S WFS F Q+ IS +L
Sbjct: 563 VLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSL 620
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 621 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAG 677
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ V+
Sbjct: 678 STKEF-FRRSKIAVF 691
Score = 146 (56.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 600 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 657
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V+ ++ + E +F + + G
Sbjct: 658 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 713
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
I + YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 714 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 773
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 774 VLKLNEQGLLDKLKNKWWYDKGECGSGG 801
Score = 88 (36.0 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 61/274 (22%), Positives = 117/274 (42%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ +II + W++ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 142 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQV---TAVNILTTTEEGYRM 197
Query: 71 LYK-LFTMQTRVFIL-----HMLPSLGSRIFEKANEIG----LMNKGCVWI----MTDGM 116
L++ L + R+ ++ + LG I + N IG L N G + I +
Sbjct: 198 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 257
Query: 117 TNLLRTLEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLL 176
N+ + TD++ I ++ + + A ++ RV WKR P A L
Sbjct: 258 ANVTGFQLVNYTDTIPAKI-MQQW-KNSDARDHTRVDWKR------PKYTSA-------L 302
Query: 177 AYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTG 236
YD +A A + + + + A Q G + +AL +RF GLTG
Sbjct: 303 TYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLTG 361
Query: 237 DYIFVD-GQLQSSAFEIINV-NNGARGVGFWSPE 268
+ F + G+ + +I + ++G R +G+W+ +
Sbjct: 362 NVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 395
Score = 44 (20.5 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 26 PIYVDNQYGEELIPSLTDALQAI 48
P+ NQ+ +L P L DAL +I
Sbjct: 124 PVDTSNQFVLQLRPELQDALISI 146
>UNIPROTKB|F1LPK4 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00948300
ProteinModelPortal:F1LPK4 Ensembl:ENSRNOT00000039491
ArrayExpress:F1LPK4 Uniprot:F1LPK4
Length = 920
Score = 189 (71.6 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 69/256 (26%), Positives = 117/256 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D + TI
Sbjct: 443 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 501
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 502 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 558
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F + ++ G S WFS F Q+ IS +L
Sbjct: 559 VLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 616
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 617 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSG 673
Query: 556 ILKQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 674 STKEF-FRRSKIAVFD 688
Score = 142 (55.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 596 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 653
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V++ ++ E +F + +A G
Sbjct: 654 ESAEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEG 709
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 710 VARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLA 769
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 770 VLKLNEQGLLDKLKNKWWYDKGECGSGG 797
Score = 97 (39.2 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 56/266 (21%), Positives = 110/266 (41%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 133 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 189
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 190 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 248
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P A + L YDA
Sbjct: 249 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTATIKYTSALTYDAVQ 304
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 305 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 363
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 364 NGKRINYTINIMELKTNGPRKIGYWS 389
Score = 46 (21.3 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 10/46 (21%), Positives = 25/46 (54%)
Query: 636 VSKAILNVTEGDKMKEIEDAWFKKHSSC--PDAGTVVSARSLGLNS 679
V+ A+L ++E + ++++ W+ C D+G+ +L L++
Sbjct: 804 VNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 849
>UNIPROTKB|F1P0E2 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:AADN02005016 EMBL:AADN02005017
EMBL:AADN02005018 IPI:IPI00581692 ProteinModelPortal:F1P0E2
Ensembl:ENSGALT00000027747 Uniprot:F1P0E2
Length = 902
Score = 198 (74.8 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 73/255 (28%), Positives = 119/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + VP Y D + +N ++ ++ G+ + V TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETK-IWNGMVGELVYGKAEIAVAPLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 560
Query: 454 VWVLEHRVN---------EDFR-GPAR---HQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + ED + GP+ ++ G S WFS F Q+ IS +L
Sbjct: 561 VLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSL 618
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 619 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSG 675
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 676 STKEF-FRRSKIAVY 689
Score = 152 (58.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 63/216 (29%), Positives = 99/216 (45%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 590 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 647
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY ++ + E +
Sbjct: 648 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWTYMKSAEPSV 703
Query: 580 FQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSP 631
F + +A G + +A LL I Q TM V + G+G A P SP
Sbjct: 704 FTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSP 763
Query: 632 LVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
L + V+ A+L + E + ++++ W+ C G
Sbjct: 764 LRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 799
Score = 87 (35.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 50/260 (19%), Positives = 99/260 (38%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GA+ +++ + W V +Y D G ++ ++ + +V ++ D +
Sbjct: 140 GALLSLLDHYEWNRFVFLY-DTDRGYSILQAIMEKAGQNSWQVS--AICVENFNDASYRR 196
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L L Q + F++ + E+ +G KG +I+ + G ++ +LE +
Sbjct: 197 LLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVANLGFKDI--SLERFMH 254
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
V G + T + RWK+ +E P + L YD +A
Sbjct: 255 GGAN-VTGFQLVDFSTPMVTKLMQRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETF 312
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQS 247
+ + + A Q G + + L +R +GLTG+ F G+ +
Sbjct: 313 RNLRRQKIDISRRGNAGDCLANPAAPWGQ-GIDMERTLKQVRIQGLTGNVQFDHYGRRVN 371
Query: 248 SAFEIINVNN-GARGVGFWS 266
++ + N G R VG+W+
Sbjct: 372 YTMDVFELKNTGPRKVGYWN 391
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 405 FTLPY-TESGVSMIVPIKDSKKRNAW 429
F Y T+ G S++ I + +N+W
Sbjct: 154 FVFLYDTDRGYSILQAIMEKAGQNSW 179
>UNIPROTKB|A8MT92 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9606 "Homo
sapiens" [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0060992 GO:GO:0007268 GO:GO:0043198
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0032279
GO:GO:0042734 GO:GO:0043195 GO:GO:0030672 GO:GO:0032281
GO:GO:0030426 GO:GO:0032839 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOGENOM:HOG000234372 HOVERGEN:HBG051839
HGNC:HGNC:4572 OrthoDB:EOG4TB49K EMBL:AC079233 EMBL:AC112240
IPI:IPI00789563 SMR:A8MT92 STRING:A8MT92 Ensembl:ENST00000393815
Ensembl:ENST00000449365 Ensembl:ENST00000507898 UCSC:uc011cit.2
Uniprot:A8MT92
Length = 836
Score = 189 (71.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 69/256 (26%), Positives = 117/256 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D + TI
Sbjct: 397 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 455
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 456 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 512
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F + ++ G S WFS F Q+ IS +L
Sbjct: 513 VLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 570
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 571 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSG 627
Query: 556 ILKQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 628 STKEF-FRRSKIAVFD 642
Score = 145 (56.1 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 64/222 (28%), Positives = 104/222 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 550 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 607
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V++ ++ E +F + +A G
Sbjct: 608 ESAEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEG 663
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ YA LL I Q TM V + G+G A P S L V+ A
Sbjct: 664 VARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLA 723
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSC--PDAGTVVSARSLGLNS 679
+L ++E + ++++ W+ C D+G+ +L L++
Sbjct: 724 VLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 765
Score = 95 (38.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 55/266 (20%), Positives = 110/266 (41%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 87 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 143
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ + L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 144 MYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 202
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P + L YDA
Sbjct: 203 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQ 258
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 259 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 317
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 318 NGKRINYTINIMELKTNGPRKIGYWS 343
>UNIPROTKB|F1PY46 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
EMBL:AAEX03006734 Ensembl:ENSCAFT00000031011 Uniprot:F1PY46
Length = 921
Score = 209 (78.6 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 73/313 (23%), Positives = 142/313 (45%)
Query: 367 DGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR 426
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 490 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPRS 548
Query: 427 NAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFWF 479
F+QP LW+ G + ++++L+ +VN + + ++ WF
Sbjct: 549 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 608
Query: 480 SFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN- 536
S+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 609 SWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIND 668
Query: 537 -LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGIA 590
L D Y ++ S + +Q+ R + +N +E E Q N A
Sbjct: 669 PRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLHA 727
Query: 591 AAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMK 650
+D + Q C T E F++ GFG SP +VS +IL E M+
Sbjct: 728 FIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENGFME 785
Query: 651 EIEDAWFKKHSSC 663
+++ W + + C
Sbjct: 786 DLDKTWVR-YQEC 797
Score = 78 (32.5 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 215 ISQNGPKLLQALSSIRFR-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWSPEKGX 271
I + GP + L S ++ G+TG F DG + + + I+N+ N VG ++
Sbjct: 313 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN----- 367
Query: 272 XXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPK 331
R IIWPG T P+G+++ T +L++ ++ F +VK T+
Sbjct: 368 ------GTHVIPNDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDG 417
Query: 332 T--QETSVVGYSIDVFKAVI 349
T +E +V G D K VI
Sbjct: 418 TCKEEFTVNG---DPVKKVI 434
Score = 42 (19.8 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 77 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 213 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLV 248
>ZFIN|ZDB-GENE-051202-1 [details] [associations]
symbol:grin1a "glutamate receptor, ionotropic,
N-methyl D-aspartate 1a" species:7955 "Danio rerio" [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-051202-1
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:BX005379 IPI:IPI00920462
Ensembl:ENSDART00000129744 Uniprot:E7F101
Length = 966
Score = 206 (77.6 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 74/313 (23%), Positives = 142/313 (45%)
Query: 367 DGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR 426
+ ++ +N ++ ++ G D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 507 NNSNKKEWNGMMGELLGGLADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPRS 565
Query: 427 NAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFWF 479
F+QP LW+ G + ++++L+ +VN + + ++ WF
Sbjct: 566 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 625
Query: 480 SFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN- 536
S+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 626 SWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIND 685
Query: 537 -LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGIA 590
L D Y ++ S + +Q+ R + +N +E E Q N A
Sbjct: 686 PRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLHA 744
Query: 591 AAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMK 650
+D + Q C T E F++ GFG SP +VS AIL+ E M+
Sbjct: 745 FIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLAILSSHENGFME 802
Query: 651 EIEDAWFKKHSSC 663
+++ W + + C
Sbjct: 803 DLDKTWVR-YQEC 814
Score = 78 (32.5 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 35/128 (27%), Positives = 53/128 (41%)
Query: 185 AVAVEKAGITGFGFDKTNVSSNATDLEA-FGISQNGPKLLQALSSIRF-RGLTGDYIFVD 242
AVAV I F+K N++ I + GP + L S ++ GLTG F D
Sbjct: 301 AVAVVAQSIQEL-FEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFND 359
Query: 243 -GQLQSSAFEIINVNNGAR-GVGFWSPEKGXXXXXXXXXXXXXXXRPIIWPGDSTSDPKG 300
G + + + I+N VG ++ + R IIWPG T P+G
Sbjct: 360 DGDRKYAHYSILNYQKSRLIQVGIYNGTQ----------VVMNKQRKIIWPGGETERPRG 409
Query: 301 WEIPTNEK 308
+++ T K
Sbjct: 410 FQMSTRLK 417
Score = 46 (21.3 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 13/70 (18%), Positives = 28/70 (40%)
Query: 43 DALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIG 102
D L + R P + + + L + ++ RV IL + +++ A +
Sbjct: 197 DQLSYDNKRGPKAEKVLQFNQETNLTALLLEAKELEARVIILSASEEDAAAVYKTARFLN 256
Query: 103 LMNKGCVWIM 112
+ G VW++
Sbjct: 257 MTGSGYVWLV 266
>UNIPROTKB|Q5VSF9 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:AL929554 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882 Pfam:PF10562
HOGENOM:HOG000231491 HOVERGEN:HBG052638 UniGene:Hs.558334
HGNC:HGNC:4584 ChiTaRS:GRIN1 IPI:IPI00647309 SMR:Q5VSF9
STRING:Q5VSF9 Ensembl:ENST00000371555 Uniprot:Q5VSF9
Length = 922
Score = 209 (78.6 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 73/313 (23%), Positives = 142/313 (45%)
Query: 367 DGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR 426
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 512 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPRS 570
Query: 427 NAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFWF 479
F+QP LW+ G + ++++L+ +VN + + ++ WF
Sbjct: 571 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 630
Query: 480 SFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN- 536
S+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 631 SWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIND 690
Query: 537 -LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGIA 590
L D Y ++ S + +Q+ R + +N +E E Q N A
Sbjct: 691 PRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLHA 749
Query: 591 AAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMK 650
+D + Q C T E F++ GFG SP +VS +IL E M+
Sbjct: 750 FIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENGFME 807
Query: 651 EIEDAWFKKHSSC 663
+++ W + + C
Sbjct: 808 DLDKTWVR-YQEC 819
Score = 78 (32.5 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 215 ISQNGPKLLQALSSIRFR-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWSPEKGX 271
I + GP + L S ++ G+TG F DG + + + I+N+ N VG ++
Sbjct: 335 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN----- 389
Query: 272 XXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPK 331
R IIWPG T P+G+++ T +L++ ++ F +VK T+
Sbjct: 390 ------GTHVIPNDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDG 439
Query: 332 T--QETSVVGYSIDVFKAVI 349
T +E +V G D K VI
Sbjct: 440 TCKEEFTVNG---DPVKKVI 456
Score = 42 (19.8 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 77 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 235 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLV 270
>UNIPROTKB|P42262 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9606 "Homo
sapiens" [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IDA] [GO:0007165
"signal transduction" evidence=TAS] [GO:0008066 "glutamate receptor
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0005789
GO:GO:0060992 GO:GO:0007268 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0042734
GO:GO:0043195 DrugBank:DB00142 GO:GO:0030672 GO:GO:0032281
GO:GO:0030426 GO:GO:0032839 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 EMBL:L20814 EMBL:BC010574
IPI:IPI00030882 IPI:IPI00219216 IPI:IPI00871510 PIR:I58181
RefSeq:NP_000817.2 RefSeq:NP_001077088.1 RefSeq:NP_001077089.1
UniGene:Hs.32763 PDB:2WJW PDB:2WJX PDB:2XHD PDB:3R7X PDB:3RN8
PDB:3RNN PDB:3UA8 PDBsum:2WJW PDBsum:2WJX PDBsum:2XHD PDBsum:3R7X
PDBsum:3RN8 PDBsum:3RNN PDBsum:3UA8 ProteinModelPortal:P42262
SMR:P42262 DIP:DIP-42852N IntAct:P42262 MINT:MINT-2791741
STRING:P42262 PhosphoSite:P42262 DMDM:23831146 PaxDb:P42262
PRIDE:P42262 Ensembl:ENST00000264426 Ensembl:ENST00000296526
GeneID:2891 KEGG:hsa:2891 UCSC:uc003ipm.4 CTD:2891
GeneCards:GC04P158141 HGNC:HGNC:4572 HPA:CAB006830 HPA:CAB007812
HPA:CAB012981 HPA:HPA008441 MIM:138247 neXtProt:NX_P42262
PharmGKB:PA28967 KO:K05198 OMA:HAVPYVS OrthoDB:EOG4TB49K
BindingDB:P42262 ChEMBL:CHEMBL4016 EvolutionaryTrace:P42262
GenomeRNAi:2891 NextBio:11429 ArrayExpress:P42262 Bgee:P42262
CleanEx:HS_GRIA2 Genevestigator:P42262 GermOnline:ENSG00000120251
Uniprot:P42262
Length = 883
Score = 189 (71.6 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 69/256 (26%), Positives = 117/256 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D + TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 559
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F + ++ G S WFS F Q+ IS +L
Sbjct: 560 VLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 617
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 618 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSG 674
Query: 556 ILKQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 675 STKEF-FRRSKIAVFD 689
Score = 142 (55.0 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 597 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 654
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V++ ++ E +F + +A G
Sbjct: 655 ESAEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEG 710
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 711 VARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLA 770
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 771 VLKLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 95 (38.5 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 55/266 (20%), Positives = 110/266 (41%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ + L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 MYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 249
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P + L YDA
Sbjct: 250 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQ 305
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 306 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 364
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 365 NGKRINYTINIMELKTNGPRKIGYWS 390
>UNIPROTKB|L7MTP7 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA]
GeneTree:ENSGT00700000104113 EMBL:AAEX03006734
Ensembl:ENSCAFT00000031003 Uniprot:L7MTP7
Length = 942
Score = 209 (78.6 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 73/313 (23%), Positives = 142/313 (45%)
Query: 367 DGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR 426
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 511 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPRS 569
Query: 427 NAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFWF 479
F+QP LW+ G + ++++L+ +VN + + ++ WF
Sbjct: 570 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 629
Query: 480 SFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN- 536
S+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 630 SWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIND 689
Query: 537 -LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGIA 590
L D Y ++ S + +Q+ R + +N +E E Q N A
Sbjct: 690 PRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLHA 748
Query: 591 AAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMK 650
+D + Q C T E F++ GFG SP +VS +IL E M+
Sbjct: 749 FIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENGFME 806
Query: 651 EIEDAWFKKHSSC 663
+++ W + + C
Sbjct: 807 DLDKTWVR-YQEC 818
Score = 78 (32.5 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 215 ISQNGPKLLQALSSIRFR-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWSPEKGX 271
I + GP + L S ++ G+TG F DG + + + I+N+ N VG ++
Sbjct: 334 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN----- 388
Query: 272 XXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPK 331
R IIWPG T P+G+++ T +L++ ++ F +VK T+
Sbjct: 389 ------GTHVIPNDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDG 438
Query: 332 T--QETSVVGYSIDVFKAVI 349
T +E +V G D K VI
Sbjct: 439 TCKEEFTVNG---DPVKKVI 455
Score = 42 (19.8 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 77 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 234 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLV 269
>UNIPROTKB|Q5R1P0 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0014069 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 KO:K05208 InterPro:IPR018882
Pfam:PF10562 EMBL:AB195993 EMBL:AB195994 EMBL:AB195995
RefSeq:NP_001008717.1 UniGene:Cfa.16224 ProteinModelPortal:Q5R1P0
SMR:Q5R1P0 STRING:Q5R1P0 PRIDE:Q5R1P0 GeneID:494007 KEGG:cfa:494007
CTD:2902 HOGENOM:HOG000231491 HOVERGEN:HBG052638 OrthoDB:EOG4CG07J
NextBio:20865536 Uniprot:Q5R1P0
Length = 943
Score = 209 (78.6 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 73/313 (23%), Positives = 142/313 (45%)
Query: 367 DGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR 426
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 512 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPRS 570
Query: 427 NAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFWF 479
F+QP LW+ G + ++++L+ +VN + + ++ WF
Sbjct: 571 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 630
Query: 480 SFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN- 536
S+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 631 SWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIND 690
Query: 537 -LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGIA 590
L D Y ++ S + +Q+ R + +N +E E Q N A
Sbjct: 691 PRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLHA 749
Query: 591 AAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMK 650
+D + Q C T E F++ GFG SP +VS +IL E M+
Sbjct: 750 FIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENGFME 807
Query: 651 EIEDAWFKKHSSC 663
+++ W + + C
Sbjct: 808 DLDKTWVR-YQEC 819
Score = 78 (32.5 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 215 ISQNGPKLLQALSSIRFR-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWSPEKGX 271
I + GP + L S ++ G+TG F DG + + + I+N+ N VG ++
Sbjct: 335 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN----- 389
Query: 272 XXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPK 331
R IIWPG T P+G+++ T +L++ ++ F +VK T+
Sbjct: 390 ------GTHVIPNDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDG 439
Query: 332 T--QETSVVGYSIDVFKAVI 349
T +E +V G D K VI
Sbjct: 440 TCKEEFTVNG---DPVKKVI 456
Score = 42 (19.8 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 77 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 235 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLV 270
>UNIPROTKB|F6Y5R7 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
OMA:VYRSAAM Ensembl:ENSCAFT00000035191 EMBL:AAEX03006734
Uniprot:F6Y5R7
Length = 949
Score = 209 (78.6 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 73/313 (23%), Positives = 142/313 (45%)
Query: 367 DGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR 426
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 518 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPRS 576
Query: 427 NAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFWF 479
F+QP LW+ G + ++++L+ +VN + + ++ WF
Sbjct: 577 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 636
Query: 480 SFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN- 536
S+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 637 SWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIND 696
Query: 537 -LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGIA 590
L D Y ++ S + +Q+ R + +N +E E Q N A
Sbjct: 697 PRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLHA 755
Query: 591 AAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMK 650
+D + Q C T E F++ GFG SP +VS +IL E M+
Sbjct: 756 FIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENGFME 813
Query: 651 EIEDAWFKKHSSC 663
+++ W + + C
Sbjct: 814 DLDKTWVR-YQEC 825
Score = 78 (32.5 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 215 ISQNGPKLLQALSSIRFR-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWSPEKGX 271
I + GP + L S ++ G+TG F DG + + + I+N+ N VG ++
Sbjct: 341 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN----- 395
Query: 272 XXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPK 331
R IIWPG T P+G+++ T +L++ ++ F +VK T+
Sbjct: 396 ------GTHVIPNDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDG 445
Query: 332 T--QETSVVGYSIDVFKAVI 349
T +E +V G D K VI
Sbjct: 446 TCKEEFTVNG---DPVKKVI 462
Score = 42 (19.8 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 77 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 241 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLV 276
>UNIPROTKB|E2R3A6 [details] [associations]
symbol:E2R3A6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882
Pfam:PF10562 ProteinModelPortal:E2R3A6 Ensembl:ENSCAFT00000035191
Uniprot:E2R3A6
Length = 957
Score = 209 (78.6 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 73/313 (23%), Positives = 142/313 (45%)
Query: 367 DGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR 426
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 510 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPRS 568
Query: 427 NAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEH-------RVNEDFRGPARHQVGTSFWF 479
F+QP LW+ G + ++++L+ +VN + + ++ WF
Sbjct: 569 TLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWF 628
Query: 480 SFSTMVFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN- 536
S+ ++ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N
Sbjct: 629 SWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIND 688
Query: 537 -LLIKRGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGIA 590
L D Y ++ S + +Q+ R + +N +E E Q N A
Sbjct: 689 PRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLHA 747
Query: 591 AAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMK 650
+D + Q C T E F++ GFG SP +VS +IL E M+
Sbjct: 748 FIWDSA-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENGFME 805
Query: 651 EIEDAWFKKHSSC 663
+++ W + + C
Sbjct: 806 DLDKTWVR-YQEC 817
Score = 78 (32.5 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 215 ISQNGPKLLQALSSIRFR-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWSPEKGX 271
I + GP + L S ++ G+TG F DG + + + I+N+ N VG ++
Sbjct: 335 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN----- 389
Query: 272 XXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPK 331
R IIWPG T P+G+++ T +L++ ++ F +VK T+
Sbjct: 390 ------GTHVIPNDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDG 439
Query: 332 T--QETSVVGYSIDVFKAVI 349
T +E +V G D K VI
Sbjct: 440 TCKEEFTVNG---DPVKKVI 456
Score = 42 (19.8 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 77 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 235 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLV 270
>UNIPROTKB|F1RYR0 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=IEA]
[GO:0048172 "regulation of short-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0006886 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0005622 GO:GO:0006874
GO:GO:0019228 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 OMA:VNGQWNG GeneTree:ENSGT00590000083056
EMBL:AEMK01188348 EMBL:CU062538 EMBL:CU407189 EMBL:CU457396
EMBL:CU928568 Ensembl:ENSSSCT00000004819 Uniprot:F1RYR0
Length = 872
Score = 181 (68.8 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 74/342 (21%), Positives = 134/342 (39%)
Query: 219 GPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGFWSPEKGXXXXX 275
G + + + + GLTG F +G ++I++ G +G W P G
Sbjct: 319 GTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMTE 378
Query: 276 XXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQET 335
P + T + + L V +++ + F K + P
Sbjct: 379 SQKGK----------PANITDS-------LSNRSLIVTTILEEPYVLFKK-SDKPLYGND 420
Query: 336 SVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGD 392
GY ID+ + + L + V Y D ++G +N ++ ++ + D V
Sbjct: 421 RFEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD-ANGQWNGMVRELIDHKADLAVAP 479
Query: 393 TTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSG 444
I + R +DF+ P+ G+S++ + + FL PL+ D+W+ S
Sbjct: 480 LAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSC 539
Query: 445 CFFIFIGF--VVWVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISN--LARF 499
F+ F W H N D + + SFWF ++ + ++ R
Sbjct: 540 VLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQEGPELMPKALFLRI 599
Query: 500 VVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 600 VGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 641
Score = 140 (54.3 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 53/218 (24%), Positives = 100/218 (45%)
Query: 476 SFWFSFSTMVFSQRERVISN--LARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTIT 533
SFWF ++ + ++ R V +W F LI+I SYTA+L + LTV++++ I
Sbjct: 574 SFWFGVGALMQQEGPELMPKALFLRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPID 633
Query: 534 DVNLLIKR----------GDNVGYQKGSFVLGILKQLGF--DERKLVVYNSHEECDELFQ 581
+ L K+ G + + K S + K F R+ V+ S+EE Q
Sbjct: 634 SADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEG---IQ 690
Query: 582 KGSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAIL 641
+ + A E + + ++C+ T + + G+G P+ SP ++ AIL
Sbjct: 691 RVLTSD--YAFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAIL 747
Query: 642 NVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ E K+ +++ W++ + CP+ + A +LG+ +
Sbjct: 748 QLQEEGKLHMMKEKWWRGNG-CPEEESK-EASALGVQN 783
Score = 102 (41.0 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 60/273 (21%), Positives = 107/273 (39%)
Query: 6 SSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDD 65
SS AI +++ F W+ +Y D+ G LI L + ++A +R R I L D
Sbjct: 117 SSLSRAILDLVQFFKWKTVTVVY-DDSTG--LI-RLQELIKA-PSRYNLRLKIRQLPADT 171
Query: 66 QIEKELYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
+ K L K ++ + + I ++A +G+M + +I T + +E
Sbjct: 172 KDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTT-LDLFALDVE 230
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPS----LFDAELNIFGLLAYDA 180
P + + G R + + + +W + LQ P L D + L YDA
Sbjct: 231 PYRYSGVN-MTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDA 289
Query: 181 TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
++V V++ F + VSS + G + + + + GLTG F
Sbjct: 290 VHVVSVGVQQ-------FPQMTVSS--LQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITF 340
Query: 241 --VDGQLQSSAFEIINVNN-GARGVGFWSPEKG 270
+G ++I++ G +G W P G
Sbjct: 341 NKTNGLRTDFDLDVISLKEEGLEKIGTWDPASG 373
>UNIPROTKB|F1PE26 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 OMA:HAVPYVS EMBL:AAEX03010079
Ensembl:ENSCAFT00000013743 Uniprot:F1PE26
Length = 842
Score = 189 (71.6 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 69/256 (26%), Positives = 117/256 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D + TI
Sbjct: 378 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 436
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 437 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 493
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F + ++ G S WFS F Q+ IS +L
Sbjct: 494 VLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 551
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 552 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSG 608
Query: 556 ILKQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 609 STKEF-FRRSKIAVFD 623
Score = 145 (56.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 64/222 (28%), Positives = 104/222 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 531 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 588
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V++ ++ E +F + +A G
Sbjct: 589 ESAEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEG 644
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ YA LL I Q TM V + G+G A P S L V+ A
Sbjct: 645 VARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLA 704
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSC--PDAGTVVSARSLGLNS 679
+L ++E + ++++ W+ C D+G+ +L L++
Sbjct: 705 VLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 746
Score = 93 (37.8 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 55/266 (20%), Positives = 109/266 (40%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 68 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 124
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 125 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 183
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P + L YDA
Sbjct: 184 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQ 239
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 240 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 298
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 299 NGKRINYTINIMELKTNGPRKIGYWS 324
>ZFIN|ZDB-GENE-040913-1 [details] [associations]
symbol:grid2 "glutamate receptor, ionotropic, delta
2" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;ISS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=ISS] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-040913-1 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG276334 HOGENOM:HOG000264260
HOVERGEN:HBG051840 EMBL:AB154207 IPI:IPI00487693
RefSeq:NP_001004123.1 UniGene:Dr.116180 ProteinModelPortal:Q68Y21
SMR:Q68Y21 STRING:Q68Y21 GeneID:448841 KEGG:dre:448841 CTD:2895
InParanoid:Q68Y21 KO:K05207 OrthoDB:EOG4SBDX4 NextBio:20832541
Uniprot:Q68Y21
Length = 1009
Score = 217 (81.4 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 101/381 (26%), Positives = 164/381 (43%)
Query: 323 FVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPD---GT--SSGSYNDL 377
FV V+ + + G+SIDV A+ L + Y+ Y PD G+ + G++N L
Sbjct: 453 FVMVSENVLGKPKKYQGFSIDVLDALANYLGFK--YEI--YVAPDHKYGSQQADGTWNGL 508
Query: 378 IYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTW 437
I ++ D + TI R + VDFT Y + V +++ K + + + L P
Sbjct: 509 IGELVFKRADVGLSALTITPERESVVDFTTRYMDYSVGVLLR-KAERTVDMFACLAPFDL 567
Query: 438 DLWVTSGCFFIFIGFVVWVLEHRVNEDFRGPARHQVGT----SFWFSFSTMVFSQRERVI 493
LW + +G +V++L +N R P T S WF + + V E
Sbjct: 568 SLWACIAGTVLLVGTLVYLLNW-LNPP-RLPMGSVSSTTLYNSMWFVYGSFVQQGGEVPY 625
Query: 494 SNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQKGS 551
+ LA R ++ VW LI+I SYTA+L + LT+ +++ +I + L K+ D G S
Sbjct: 626 TTLATRMMMGVWWLFALIVISSYTANLAAFLTISRIENSIQSLQDLAKQTDLPYGTVLDS 685
Query: 552 FVLGILKQLGFD--ER--------KLV-----VYNSHEECDELFQKGSANGGIAAAFDEI 596
V ++ G + ER +++ N+ EE E +K G A +D
Sbjct: 686 AVYDQVRSKGMNPFERDPMYSQMWRMINRTGGAENNVEESKEGIRKVKY-GRFAFVWDAA 744
Query: 597 PYAKLLIG-QHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDA 655
+ I + CS YT V G+G A SP S+ IL + + M ++
Sbjct: 745 VLEYVAINDEDCSLYT-VSNNVADRGYGMAMQHGSPYRDIFSQRILELQQNGDMDILKLK 803
Query: 656 WFKKHSSCPDAGTVVSARSLG 676
W+ + S C D + V R G
Sbjct: 804 WWPRDSPC-DLYSPVGTRKSG 823
Score = 66 (28.3 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 64/280 (22%), Positives = 106/280 (37%)
Query: 12 ITAIIKAFGWREAVPIYVDNQYGEELIPSLTD--ALQAIDTRVP-YRSVISPLATDD--- 65
I ++ + W++ + I+ D Y I + D + Q +D + S I+ + T
Sbjct: 156 IFQVVMEYTWQKFI-IFYDTDYDIRGIENFLDQTSQQGMDVSLQKVESNINMMITGMFRT 214
Query: 66 -QIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
++E EL++ + R +L M P+ + E L+ C WI+ + + +
Sbjct: 215 MRVE-ELHR-YRDTLRRAVLFMSPATAKAFITEVVETNLVAFDCQWIIINEEIS-----D 267
Query: 125 PSVTDSMQGVIGVRPYVPKTKAL-ENFRVRWKRKFLQENPSLFDAE------LNIFGLLA 177
V + + IG V +T L +N R R + N SL D + L I
Sbjct: 268 MDVQELVMKSIGRLTLVRQTFPLPQNTSQRCVRNNHRINTSLCDPKDPKAQMLEITNRYI 327
Query: 178 YDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGD 237
YD LA + ++S + + Q G +L+ + GLT
Sbjct: 328 YDTVLLLANTFHRKLEDRKWHSMASLSCIRKGSKPW---QGGKSMLETVKKGGVSGLTSL 384
Query: 238 YIFVD-GQLQSSAFEIINVNNG---ARGVG---FWSPEKG 270
F D G + FEI+ N G RGV W P G
Sbjct: 385 LEFNDNGSNPNIHFEILGTNYGEDRGRGVSRLATWDPIHG 424
>UNIPROTKB|I3LHM1 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:HAVPYVS EMBL:CU915394 EMBL:FP325266 Ensembl:ENSSSCT00000022356
Uniprot:I3LHM1
Length = 854
Score = 189 (71.6 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 69/256 (26%), Positives = 117/256 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D + TI
Sbjct: 397 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 455
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 456 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 512
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F + ++ G S WFS F Q+ IS +L
Sbjct: 513 VLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 570
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 571 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSG 627
Query: 556 ILKQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 628 STKEF-FRRSKIAVFD 642
Score = 142 (55.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 550 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 607
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V++ ++ E +F + +A G
Sbjct: 608 ESAEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEG 663
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 664 VARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLA 723
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 724 VLKLNEQGLLDKLKNKWWYDKGECGSGG 751
Score = 93 (37.8 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 55/266 (20%), Positives = 109/266 (40%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 87 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 143
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 144 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 202
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P + L YDA
Sbjct: 203 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQ 258
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 259 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 317
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 318 NGKRINYTINIMELKTNGPRKIGYWS 343
>UNIPROTKB|F1MK58 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:HAVPYVS EMBL:DAAA02044901 EMBL:DAAA02044902 IPI:IPI00705733
ProteinModelPortal:F1MK58 Ensembl:ENSBTAT00000006271 Uniprot:F1MK58
Length = 883
Score = 189 (71.6 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 69/256 (26%), Positives = 117/256 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D + TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 559
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F + ++ G S WFS F Q+ IS +L
Sbjct: 560 VLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 617
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 618 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSG 674
Query: 556 ILKQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 675 STKEF-FRRSKIAVFD 689
Score = 145 (56.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 64/222 (28%), Positives = 104/222 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 597 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 654
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V++ ++ E +F + +A G
Sbjct: 655 ESAEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEG 710
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ YA LL I Q TM V + G+G A P S L V+ A
Sbjct: 711 VARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLA 770
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSC--PDAGTVVSARSLGLNS 679
+L ++E + ++++ W+ C D+G+ +L L++
Sbjct: 771 VLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 812
Score = 93 (37.8 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 55/266 (20%), Positives = 109/266 (40%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 249
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P + L YDA
Sbjct: 250 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQ 305
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 306 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 364
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 365 NGKRINYTINIMELKTNGPRKIGYWS 390
>UNIPROTKB|F1MBY1 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:DAAA02044901 EMBL:DAAA02044902 IPI:IPI00908138
Ensembl:ENSBTAT00000056038 Uniprot:F1MBY1
Length = 883
Score = 189 (71.6 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 69/256 (26%), Positives = 117/256 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D + TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 559
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F + ++ G S WFS F Q+ IS +L
Sbjct: 560 VLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGA--FMQQGCDISPRSL 617
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 618 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSG 674
Query: 556 ILKQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 675 STKEF-FRRSKIAVFD 689
Score = 142 (55.0 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 597 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 654
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V++ ++ E +F + +A G
Sbjct: 655 ESAEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEG 710
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 711 VARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLA 770
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 771 VLKLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 93 (37.8 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 55/266 (20%), Positives = 109/266 (40%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 TYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 249
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P + L YDA
Sbjct: 250 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQ 305
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 306 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 364
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 365 NGKRINYTINIMELKTNGPRKIGYWS 390
>UNIPROTKB|Q38PU7 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9541 "Macaca
fascicularis" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005789 GO:GO:0030054
GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 HSSP:P19491
EMBL:DQ159930 ProteinModelPortal:Q38PU7 SMR:Q38PU7 Uniprot:Q38PU7
Length = 883
Score = 186 (70.5 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 65/254 (25%), Positives = 114/254 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D + TI
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVYGKADIAIAPLTI 502
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 503 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 559
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVISNLA- 497
V L R + E+F + ++ G S WFS + + +L+
Sbjct: 560 VLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSG 619
Query: 498 RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGIL 557
R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 620 RIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGST 676
Query: 558 KQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 677 KEF-FRRSKIAVFD 689
Score = 139 (54.0 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 57/206 (27%), Positives = 93/206 (45%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
S WFS + + +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 597 SLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIES 656
Query: 535 VNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANGGI 589
L K+ + + Y G+ G K+ F K+ V++ ++ E +F + +A G
Sbjct: 657 AEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVA 712
Query: 590 AAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKAIL 641
+ YA LL I Q TM V + G+G A P S L + V+ A+L
Sbjct: 713 RVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLAVL 772
Query: 642 NVTEGDKMKEIEDAWFKKHSSCPDAG 667
+ E + ++++ W+ C G
Sbjct: 773 KLNEQGLLDKLKNKWWYDKGECGSGG 798
Score = 95 (38.5 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 55/266 (20%), Positives = 110/266 (41%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ + L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 MYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 249
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P + L YDA
Sbjct: 250 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQ 305
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 306 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 364
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 365 NGKRINYTINIMELKTNGPRKIGYWS 390
>UNIPROTKB|F1NZT2 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0014054
"positive regulation of gamma-aminobutyric acid secretion"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0030534 "adult behavior" evidence=IEA] [GO:0032230 "positive
regulation of synaptic transmission, GABAergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0035235
GO:GO:0042734 GO:GO:0032230 GO:GO:0051899 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:AADN02010740
EMBL:AADN02010741 IPI:IPI00602891 ProteinModelPortal:F1NZT2
Ensembl:ENSGALT00000025530 Uniprot:F1NZT2
Length = 874
Score = 187 (70.9 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 56/216 (25%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + V + + G +N ++ ++ + D V TI +
Sbjct: 431 GYCLDLLKELSNILGFIYEVKLVSDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITY 490
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 491 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 550
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 551 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 610
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 611 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 646
Score = 150 (57.9 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 65/268 (24%), Positives = 114/268 (42%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 528 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 586
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 587 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 646
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + GI Y
Sbjct: 647 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVKNNDE--GIQRVLTT-DY 702
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 703 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 762
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ + A +LG+ +
Sbjct: 763 MKEKWWRGNG-CPEEDSK-EASALGVEN 788
Score = 92 (37.4 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 58/273 (21%), Positives = 104/273 (38%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVIS------PLATD 64
A+ ++ + W+ +Y D+ G + L A + ++ R + S PL +
Sbjct: 129 AVLDLVLYYNWKIVTVVYEDST-GLIRLQELIKAPSRYNIKIKIRQLPSGNKDARPLLKE 187
Query: 65 DQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
+ KE Y +F H + I ++ +G+M + + T + LE
Sbjct: 188 MKKGKEFYVIFDCS------H---ETAAEILKQILSMGMMTEYYHYFFTT-LDLFALDLE 237
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPS----LFDAELNIFGLLAYDA 180
P + + G R + + + +W + LQ P L D + L YDA
Sbjct: 238 PYRYSGVN-MTGFRLLNIENPQVSSVIEKWSMERLQAPPKPETGLLDGMMTTEAALMYDA 296
Query: 181 TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
+AVA ++A + VSS + GP+ + + R+ GLTG F
Sbjct: 297 VYMVAVASQRAS-------QMTVSS--LQCHRHKPWRFGPRFMNLIKEARWDGLTGRITF 347
Query: 241 --VDGQLQSSAFEIINVNN-GARGVGFWSPEKG 270
DG + +II++ G +G W+ G
Sbjct: 348 NKTDGLRKDFDLDIISLKEEGTEKIGVWNSYSG 380
>MGI|MGI:95808 [details] [associations]
symbol:Gria1 "glutamate receptor, ionotropic, AMPA1 (alpha 1)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0001965 "G-protein alpha-subunit
binding" evidence=ISO] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005769 "early endosome" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005829
"cytosol" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IGI] [GO:0007616 "long-term memory" evidence=ISO;IMP]
[GO:0008021 "synaptic vesicle" evidence=IDA] [GO:0008179 "adenylate
cyclase binding" evidence=ISO] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=IDA] [GO:0009636 "response to toxic
substance" evidence=ISO] [GO:0009986 "cell surface" evidence=IDA]
[GO:0014069 "postsynaptic density" evidence=ISO;IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030165
"PDZ domain binding" evidence=ISO] [GO:0030425 "dendrite"
evidence=IDA] [GO:0031267 "small GTPase binding" evidence=ISO]
[GO:0031489 "myosin V binding" evidence=ISO] [GO:0031594
"neuromuscular junction" evidence=ISO] [GO:0031623 "receptor
internalization" evidence=ISO;IMP] [GO:0031681 "G-protein
beta-subunit binding" evidence=ISO] [GO:0031698 "beta-2 adrenergic
receptor binding" evidence=ISO] [GO:0032279 "asymmetric synapse"
evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032590 "dendrite
membrane" evidence=IDA] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043025 "neuronal cell body" evidence=ISO;IDA] [GO:0043197
"dendritic spine" evidence=ISO;IDA] [GO:0043198 "dendritic shaft"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044309 "neuron spine" evidence=ISO;IDA] [GO:0045202 "synapse"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045838 "positive regulation of membrane potential"
evidence=ISO] [GO:0048167 "regulation of synaptic plasticity"
evidence=ISO] [GO:0050804 "regulation of synaptic transmission"
evidence=ISO] [GO:0050806 "positive regulation of synaptic
transmission" evidence=ISO] [GO:0051018 "protein kinase A binding"
evidence=ISO] [GO:0060076 "excitatory synapse" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95808 GO:GO:0014069
GO:GO:0009986 GO:GO:0005789 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0008021 GO:GO:0007616
GO:GO:0032281 GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
eggNOG:NOG316680 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 HOGENOM:HOG000234372 CTD:2890 HOVERGEN:HBG051839
KO:K05197 EMBL:X57497 IPI:IPI00136965 PIR:S12874
RefSeq:NP_001106796.1 UniGene:Mm.4920 ProteinModelPortal:P23818
SMR:P23818 DIP:DIP-31970N IntAct:P23818 MINT:MINT-1897734
STRING:P23818 PhosphoSite:P23818 PaxDb:P23818 PRIDE:P23818
Ensembl:ENSMUST00000036315 GeneID:14799 KEGG:mmu:14799
UCSC:uc007izs.2 InParanoid:P23818 OMA:ARIMQQW BindingDB:P23818
ChEMBL:CHEMBL3502 ChiTaRS:GRIA1 NextBio:286953 Bgee:P23818
CleanEx:MM_GRIA1 Genevestigator:P23818
GermOnline:ENSMUSG00000020524 Uniprot:P23818
Length = 907
Score = 198 (74.8 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 70/255 (27%), Positives = 118/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y+ + V Y D + ++N ++ ++ G D V TI
Sbjct: 437 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 495
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 552
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F ++ G S WFS F Q+ IS +L
Sbjct: 553 VLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSL 610
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 611 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAG 667
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ V+
Sbjct: 668 STKEF-FRRSKIAVF 681
Score = 146 (56.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 64/222 (28%), Positives = 103/222 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 590 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 647
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V+ ++ + E +F + + G
Sbjct: 648 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 703
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
I + YA LL I Q TM V + G+G A P S L V+ A
Sbjct: 704 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLA 763
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSC--PDAGTVVSARSLGLNS 679
+L ++E + +++ W+ C D+G+ +L L++
Sbjct: 764 VLKLSEQGVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSN 805
Score = 81 (33.6 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 60/274 (21%), Positives = 116/274 (42%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ +II + W+ V IY D G ++ + D + +V + ++ L T ++ +
Sbjct: 132 ALISIIDHYKWQTFVYIY-DADRGLSVLQRVLDTAAEKNWQV---TAVNILTTTEEGYRM 187
Query: 71 LYK-LFTMQTRVFIL-----HMLPSLGSRIFEKANEIG----LMNKGCVWI----MTDGM 116
L++ L + R+ ++ + LG + + N IG L N G + I +
Sbjct: 188 LFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGFMDIDLNKFKESG 247
Query: 117 TNLLRTLEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLL 176
N+ + TD++ I ++ + + A ++ RV WKR P A L
Sbjct: 248 ANVTGFQLVNYTDTIPARI-MQQW-RTSDARDHTRVDWKR------PKYTSA-------L 292
Query: 177 AYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTG 236
YD +A A + + + + A Q G + +AL +RF GLTG
Sbjct: 293 TYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLTG 351
Query: 237 DYIFVD-GQLQSSAFEIINV-NNGARGVGFWSPE 268
+ F + G+ + +I + ++G R +G+W+ +
Sbjct: 352 NVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 385
Score = 40 (19.1 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 26 PIYVDNQYGEELIPSLTDALQAI 48
P+ NQ+ +L P L +AL +I
Sbjct: 114 PVDTSNQFVLQLRPELQEALISI 136
>UNIPROTKB|E2RIZ6 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 OMA:RIGYWND EMBL:AAEX03003527 EMBL:AAEX03003528
Ensembl:ENSCAFT00000023560 Uniprot:E2RIZ6
Length = 854
Score = 199 (75.1 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 72/255 (28%), Positives = 119/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + VP Y D + +N ++ ++ G+ + + TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 560
Query: 454 VWVLEHRVN---------EDFR-GPAR---HQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + ED + GP+ ++ G S WFS F Q+ IS +L
Sbjct: 561 VLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSL 618
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 619 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSG 675
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 676 STKEF-FRRSKIAVY 689
Score = 161 (61.7 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 69/227 (30%), Positives = 106/227 (46%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 590 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 647
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY ++ E +
Sbjct: 648 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWTYMRSAEPSV 703
Query: 580 FQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSP 631
F + +A G + +A LL I Q TM V + G+G A P S
Sbjct: 704 FTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSS 763
Query: 632 LVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC-P-DAGTVVSARSLG 676
L V+ A+L ++E + ++++ W+ C P D+G+ VS RS G
Sbjct: 764 LRTPVNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKVSRRSSG 810
Score = 79 (32.9 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 50/260 (19%), Positives = 99/260 (38%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GA+ +++ + W V +Y D G ++ ++ + V ++ D +
Sbjct: 140 GALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQHGWHVS--AICVENFNDVSYRQ 196
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L +L Q + F++ I E+ +G KG +I+ + G ++ +LE +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLERFIH 254
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
V G + T + RWK+ +E P + L YD +A
Sbjct: 255 GGAN-VTGFQLVDFNTPMVTKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETF 312
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQS 247
+ + + A Q G + + L +R +GLTG+ F G+ +
Sbjct: 313 RNLRRQKIDISRRGNAGDCLANPAAPWGQ-GIDMERTLKQVRIQGLTGNVQFDHYGRRVN 371
Query: 248 SAFEIINVNN-GARGVGFWS 266
++ + + G R VG+W+
Sbjct: 372 YTMDVFELKSTGPRKVGYWN 391
Score = 38 (18.4 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 372 GSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTL--PY 409
G +ND+ V + + + DT + NR+ V + PY
Sbjct: 388 GYWNDMDKLVLIQDVPTLGNDTAAIENRTVVVTTIMESPY 427
>UNIPROTKB|G3V6W0 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
EMBL:CH474089 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
CTD:2893 KO:K05200 RefSeq:NP_058959.2 UniGene:Rn.10938 GeneID:29629
KEGG:rno:29629 NextBio:609852 ProteinModelPortal:G3V6W0
Ensembl:ENSRNOT00000009514 Uniprot:G3V6W0
Length = 902
Score = 199 (75.1 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 72/255 (28%), Positives = 119/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + VP Y D + +N ++ ++ G+ + + TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 560
Query: 454 VWVLEHRVN---------EDFR-GPAR---HQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + ED + GP+ ++ G S WFS F Q+ IS +L
Sbjct: 561 VLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSL 618
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 619 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSG 675
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 676 STKEF-FRRSKIAVY 689
Score = 148 (57.2 bits), Expect = 7.6e-09, Sum P(3) = 7.6e-09
Identities = 66/230 (28%), Positives = 106/230 (46%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 590 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 647
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY ++ E +
Sbjct: 648 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWTYMRSAEPSV 703
Query: 580 FQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSP 631
F + +A G + +A LL I Q TM V + G+G A P S
Sbjct: 704 FTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSS 763
Query: 632 LVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC-P-DAGTVVSARSLGLNS 679
L V+ A+L ++E + ++++ W+ C P D+G+ +L L++
Sbjct: 764 LRTPVNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSN 813
Score = 79 (32.9 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 50/260 (19%), Positives = 99/260 (38%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GA+ +++ + W V +Y D G ++ ++ + V ++ D +
Sbjct: 140 GALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVSYRQ 196
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L +L Q + F++ I E+ +G KG +I+ + G ++ +LE +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLERFIH 254
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
V G + T + RWK+ +E P + L YD +A
Sbjct: 255 GGAN-VTGFQLVDFNTPMVTKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETF 312
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQS 247
+ + + A Q G + + L +R +GLTG+ F G+ +
Sbjct: 313 RSLRRQKIDISRRGNAGDCLANPAAPWGQ-GIDMERTLKQVRIQGLTGNVQFDHYGRRVN 371
Query: 248 SAFEIINVNN-GARGVGFWS 266
++ + + G R VG+W+
Sbjct: 372 YTMDVFELKSTGPRKVGYWN 391
Score = 39 (18.8 bits), Expect = 7.6e-09, Sum P(3) = 7.6e-09
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 372 GSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTL--PY 409
G +ND+ V + + + DT + NR+ V + PY
Sbjct: 388 GYWNDMDKLVLIQDMPTLGNDTAAIENRTVVVTTIMESPY 427
>MGI|MGI:95811 [details] [associations]
symbol:Gria4 "glutamate receptor, ionotropic, AMPA4 (alpha 4)"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0014069 "postsynaptic density" evidence=ISO] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO]
[GO:0042995 "cell projection" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO;IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050804 "regulation of
synaptic transmission" evidence=ISO] [GO:0051968 "positive
regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95811 GO:GO:0030054
GO:GO:0045211 GO:GO:0030425 GO:GO:0045202 GO:GO:0032281
InterPro:IPR001828 eggNOG:NOG316680 GeneTree:ENSGT00590000082809
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2893 KO:K05200 OrthoDB:EOG4DBTD0 ChiTaRS:GRIA4
GO:GO:0032983 EMBL:AB022913 EMBL:AB079073 EMBL:BC060697
IPI:IPI00131471 RefSeq:NP_001106651.1 RefSeq:NP_001106652.1
RefSeq:NP_062665.3 UniGene:Mm.209263 ProteinModelPortal:Q9Z2W8
SMR:Q9Z2W8 IntAct:Q9Z2W8 STRING:Q9Z2W8 PhosphoSite:Q9Z2W8
PaxDb:Q9Z2W8 PRIDE:Q9Z2W8 Ensembl:ENSMUST00000063508 GeneID:14802
KEGG:mmu:14802 UCSC:uc009obo.2 InParanoid:Q9Z2W8 BindingDB:Q9Z2W8
ChEMBL:CHEMBL3615 NextBio:286965 Bgee:Q9Z2W8 CleanEx:MM_GRIA4
Genevestigator:Q9Z2W8 GermOnline:ENSMUSG00000025892 Uniprot:Q9Z2W8
Length = 902
Score = 199 (75.1 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 72/255 (28%), Positives = 119/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + VP Y D + +N ++ ++ G+ + + TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 560
Query: 454 VWVLEHRVN---------EDFR-GPAR---HQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + ED + GP+ ++ G S WFS F Q+ IS +L
Sbjct: 561 VLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSL 618
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 619 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSG 675
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 676 STKEF-FRRSKIAVY 689
Score = 148 (57.2 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 66/230 (28%), Positives = 106/230 (46%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 590 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 647
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY ++ E +
Sbjct: 648 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWTYMRSAEPSV 703
Query: 580 FQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSP 631
F + +A G + +A LL I Q TM V + G+G A P S
Sbjct: 704 FTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSS 763
Query: 632 LVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC-P-DAGTVVSARSLGLNS 679
L V+ A+L ++E + ++++ W+ C P D+G+ +L L++
Sbjct: 764 LRTPVNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSN 813
Score = 79 (32.9 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 50/260 (19%), Positives = 99/260 (38%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GA+ +++ + W V +Y D G ++ ++ + V ++ D +
Sbjct: 140 GALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVSYRQ 196
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L +L Q + F++ I E+ +G KG +I+ + G ++ +LE +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLERFIH 254
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
V G + T + RWK+ +E P + L YD +A
Sbjct: 255 GGAN-VTGFQLVDFNTPMVTKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETF 312
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQS 247
+ + + A Q G + + L +R +GLTG+ F G+ +
Sbjct: 313 RSLRRQKIDISRRGNAGDCLANPAAPWGQ-GIDMERTLKQVRIQGLTGNVQFDHYGRRVN 371
Query: 248 SAFEIINVNN-GARGVGFWS 266
++ + + G R VG+W+
Sbjct: 372 YTMDVFELKSTGPRKVGYWN 391
Score = 37 (18.1 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 372 GSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTL--PY 409
G +ND+ V + + + DT + NR+ V + PY
Sbjct: 388 GYWNDMDKLVLIQDAPTLGNDTAAIENRTVVVTTIMESPY 427
>RGD|61863 [details] [associations]
symbol:Gria4 "glutamate receptor, ionotropic, AMPA 4"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IMP;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007268 "synaptic
transmission" evidence=IMP;TAS] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=TAS] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IDA;IMP] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0045202 "synapse" evidence=ISO;IMP]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050803
"regulation of synapse structure and activity" evidence=TAS]
[GO:0050804 "regulation of synaptic transmission" evidence=IMP]
[GO:0051968 "positive regulation of synaptic transmission,
glutamatergic" evidence=IMP] [GO:0060992 "response to fungicide"
evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0014069
GO:GO:0060992 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0050803 GO:GO:0043195 GO:GO:0051968 GO:GO:0032281
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234
HOGENOM:HOG000234372 HOVERGEN:HBG051839 GO:GO:0015277 CTD:2893
KO:K05200 OrthoDB:EOG4DBTD0 GO:GO:0032983 EMBL:M36421 EMBL:M85037
EMBL:M38063 EMBL:S94371 IPI:IPI00195445 IPI:IPI00231131
IPI:IPI00231132 PIR:A44839 PIR:D40170 RefSeq:NP_001106655.1
RefSeq:NP_058959.2 UniGene:Rn.10938 PDB:3EN3 PDB:3EPE PDB:3FAS
PDB:3FAT PDB:3KEI PDB:3KFM PDB:4GPA PDBsum:3EN3 PDBsum:3EPE
PDBsum:3FAS PDBsum:3FAT PDBsum:3KEI PDBsum:3KFM PDBsum:4GPA
ProteinModelPortal:P19493 SMR:P19493 DIP:DIP-41142N MINT:MINT-86166
STRING:P19493 TCDB:1.A.10.1.2 PhosphoSite:P19493 PRIDE:P19493
GeneID:29629 KEGG:rno:29629 UCSC:RGD:61863 InParanoid:P19493
BindingDB:P19493 ChEMBL:CHEMBL3505 EvolutionaryTrace:P19493
NextBio:609852 ArrayExpress:P19493 Genevestigator:P19493
GermOnline:ENSRNOG00000006957 Uniprot:P19493
Length = 902
Score = 199 (75.1 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 72/255 (28%), Positives = 119/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + VP Y D + +N ++ ++ G+ + + TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 560
Query: 454 VWVLEHRVN---------EDFR-GPAR---HQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + ED + GP+ ++ G S WFS F Q+ IS +L
Sbjct: 561 VLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSL 618
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 619 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSG 675
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 676 STKEF-FRRSKIAVY 689
Score = 144 (55.7 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 61/217 (28%), Positives = 99/217 (45%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 590 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 647
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY ++ E +
Sbjct: 648 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWTYMRSAEPSV 703
Query: 580 FQKGSANGGIAAAFDEIPYAKLLIGQHCSKYT-MVEP--TFKTAG------FGFAFPLHS 630
F + +A G + +A L+ ++YT +P T K G +G A P S
Sbjct: 704 FTRTTAEGVARVRKSKGKFA-FLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGS 762
Query: 631 PLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
L + V+ A+L + E + ++++ W+ C G
Sbjct: 763 SLGNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 799
Score = 79 (32.9 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 50/260 (19%), Positives = 99/260 (38%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GA+ +++ + W V +Y D G ++ ++ + V ++ D +
Sbjct: 140 GALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVSYRQ 196
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L +L Q + F++ I E+ +G KG +I+ + G ++ +LE +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLERFIH 254
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
V G + T + RWK+ +E P + L YD +A
Sbjct: 255 GGAN-VTGFQLVDFNTPMVTKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETF 312
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQS 247
+ + + A Q G + + L +R +GLTG+ F G+ +
Sbjct: 313 RSLRRQKIDISRRGNAGDCLANPAAPWGQ-GIDMERTLKQVRIQGLTGNVQFDHYGRRVN 371
Query: 248 SAFEIINVNN-GARGVGFWS 266
++ + + G R VG+W+
Sbjct: 372 YTMDVFELKSTGPRKVGYWN 391
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 372 GSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTL--PY 409
G +ND+ V + + + DT + NR+ V + PY
Sbjct: 388 GYWNDMDKLVLIQDMPTLGNDTAAIENRTVVVTTIMESPY 427
>UNIPROTKB|P19493 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0014069 GO:GO:0060992
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0050803
GO:GO:0043195 GO:GO:0051968 GO:GO:0032281 InterPro:IPR001828
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 CTD:2893 KO:K05200
OrthoDB:EOG4DBTD0 GO:GO:0032983 EMBL:M36421 EMBL:M85037 EMBL:M38063
EMBL:S94371 IPI:IPI00195445 IPI:IPI00231131 IPI:IPI00231132
PIR:A44839 PIR:D40170 RefSeq:NP_001106655.1 RefSeq:NP_058959.2
UniGene:Rn.10938 PDB:3EN3 PDB:3EPE PDB:3FAS PDB:3FAT PDB:3KEI
PDB:3KFM PDB:4GPA PDBsum:3EN3 PDBsum:3EPE PDBsum:3FAS PDBsum:3FAT
PDBsum:3KEI PDBsum:3KFM PDBsum:4GPA ProteinModelPortal:P19493
SMR:P19493 DIP:DIP-41142N MINT:MINT-86166 STRING:P19493
TCDB:1.A.10.1.2 PhosphoSite:P19493 PRIDE:P19493 GeneID:29629
KEGG:rno:29629 UCSC:RGD:61863 InParanoid:P19493 BindingDB:P19493
ChEMBL:CHEMBL3505 EvolutionaryTrace:P19493 NextBio:609852
ArrayExpress:P19493 Genevestigator:P19493
GermOnline:ENSRNOG00000006957 Uniprot:P19493
Length = 902
Score = 199 (75.1 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 72/255 (28%), Positives = 119/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + VP Y D + +N ++ ++ G+ + + TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 560
Query: 454 VWVLEHRVN---------EDFR-GPAR---HQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + ED + GP+ ++ G S WFS F Q+ IS +L
Sbjct: 561 VLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSL 618
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 619 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSG 675
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 676 STKEF-FRRSKIAVY 689
Score = 144 (55.7 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 61/217 (28%), Positives = 99/217 (45%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 590 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 647
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY ++ E +
Sbjct: 648 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWTYMRSAEPSV 703
Query: 580 FQKGSANGGIAAAFDEIPYAKLLIGQHCSKYT-MVEP--TFKTAG------FGFAFPLHS 630
F + +A G + +A L+ ++YT +P T K G +G A P S
Sbjct: 704 FTRTTAEGVARVRKSKGKFA-FLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGS 762
Query: 631 PLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
L + V+ A+L + E + ++++ W+ C G
Sbjct: 763 SLGNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 799
Score = 79 (32.9 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 50/260 (19%), Positives = 99/260 (38%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GA+ +++ + W V +Y D G ++ ++ + V ++ D +
Sbjct: 140 GALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVSYRQ 196
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L +L Q + F++ I E+ +G KG +I+ + G ++ +LE +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLERFIH 254
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
V G + T + RWK+ +E P + L YD +A
Sbjct: 255 GGAN-VTGFQLVDFNTPMVTKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETF 312
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQS 247
+ + + A Q G + + L +R +GLTG+ F G+ +
Sbjct: 313 RSLRRQKIDISRRGNAGDCLANPAAPWGQ-GIDMERTLKQVRIQGLTGNVQFDHYGRRVN 371
Query: 248 SAFEIINVNN-GARGVGFWS 266
++ + + G R VG+W+
Sbjct: 372 YTMDVFELKSTGPRKVGYWN 391
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 372 GSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTL--PY 409
G +ND+ V + + + DT + NR+ V + PY
Sbjct: 388 GYWNDMDKLVLIQDMPTLGNDTAAIENRTVVVTTIMESPY 427
>UNIPROTKB|G3V6W1 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
EMBL:CH474089 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 CTD:2893 KO:K05200 OMA:RIGYWND
RefSeq:NP_001106655.1 UniGene:Rn.10938 GeneID:29629 KEGG:rno:29629
NextBio:609852 ProteinModelPortal:G3V6W1 Ensembl:ENSRNOT00000009542
Uniprot:G3V6W1
Length = 902
Score = 199 (75.1 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 72/255 (28%), Positives = 119/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + VP Y D + +N ++ ++ G+ + + TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 560
Query: 454 VWVLEHRVN---------EDFR-GPAR---HQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + ED + GP+ ++ G S WFS F Q+ IS +L
Sbjct: 561 VLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSL 618
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 619 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSG 675
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 676 STKEF-FRRSKIAVY 689
Score = 143 (55.4 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 62/216 (28%), Positives = 97/216 (44%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 590 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 647
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY ++ E +
Sbjct: 648 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWTYMRSAEPSV 703
Query: 580 FQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSP 631
F + +A G + +A LL I Q TM V + G+G A P S
Sbjct: 704 FTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSS 763
Query: 632 LVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
L + V+ A+L + E + ++++ W+ C G
Sbjct: 764 LRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 799
Score = 79 (32.9 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 50/260 (19%), Positives = 99/260 (38%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GA+ +++ + W V +Y D G ++ ++ + V ++ D +
Sbjct: 140 GALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVSYRQ 196
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L +L Q + F++ I E+ +G KG +I+ + G ++ +LE +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLERFIH 254
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
V G + T + RWK+ +E P + L YD +A
Sbjct: 255 GGAN-VTGFQLVDFNTPMVTKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETF 312
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQS 247
+ + + A Q G + + L +R +GLTG+ F G+ +
Sbjct: 313 RSLRRQKIDISRRGNAGDCLANPAAPWGQ-GIDMERTLKQVRIQGLTGNVQFDHYGRRVN 371
Query: 248 SAFEIINVNN-GARGVGFWS 266
++ + + G R VG+W+
Sbjct: 372 YTMDVFELKSTGPRKVGYWN 391
Score = 39 (18.8 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 372 GSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTL--PY 409
G +ND+ V + + + DT + NR+ V + PY
Sbjct: 388 GYWNDMDKLVLIQDMPTLGNDTAAIENRTVVVTTIMESPY 427
>UNIPROTKB|F1M4B0 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0030534
"adult behavior" evidence=IEA] [GO:0032230 "positive regulation of
synaptic transmission, GABAergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
IPI:IPI00952320 ProteinModelPortal:F1M4B0
Ensembl:ENSRNOT00000067147 ArrayExpress:F1M4B0 Uniprot:F1M4B0
Length = 895
Score = 193 (73.0 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 423 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 482
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 483 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 542
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 543 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 602
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 603 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 638
Score = 153 (58.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 520 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 578
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 579 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 638
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 639 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVK--NSDEGIQRVLTT-DY 694
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 695 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 754
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ + A +LG+ +
Sbjct: 755 MKEKWWRGNG-CPEEDSK-EASALGVEN 780
Score = 85 (35.0 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 55/268 (20%), Positives = 99/268 (36%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ ++ + W+ +Y D+ G + L A + ++ R + P A D K
Sbjct: 121 AVLDLVLYYNWKTVTVVYEDST-GLIRLQELIKAPSRYNIKIKIRQL--PPANKDA--KP 175
Query: 71 LYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTD 129
L K +++ + I ++ +G+M + + T + LE
Sbjct: 176 LLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT-LDLFALDLE-LYRY 233
Query: 130 SMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSALA 185
S + G R + + +W + LQ P L D + L YDA +A
Sbjct: 234 SGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 293
Query: 186 VAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VDG 243
+A +A + VSS + GP+ + + R+ GLTG F DG
Sbjct: 294 IASHRAS-------QLTVSS--LQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDG 344
Query: 244 QLQSSAFEIINVNN-GARGVGFWSPEKG 270
+ +II++ G +G W+ G
Sbjct: 345 LRKDFDLDIISLKEEGTEKIGIWNSNSG 372
Score = 39 (18.8 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 96 EKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDSM 131
E +IG+ N MTDG N R ++TDS+
Sbjct: 359 EGTEKIGIWNSNSGLNMTDG--N--RDRSNNITDSL 390
>WB|WBGene00001613 [details] [associations]
symbol:glr-2 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 EMBL:FO080148
eggNOG:NOG316680 GeneTree:ENSGT00590000082809 KO:K05313
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234372 EMBL:AF318606
PIR:T15306 RefSeq:NP_001021113.1 RefSeq:NP_001021114.1
UniGene:Cel.19346 ProteinModelPortal:Q10914 SMR:Q10914
STRING:Q10914 PaxDb:Q10914 PRIDE:Q10914 EnsemblMetazoa:B0280.12b
GeneID:175999 KEGG:cel:CELE_B0280.12 UCSC:B0280.12b CTD:175999
WormBase:B0280.12a WormBase:B0280.12b InParanoid:Q10914 OMA:MTPPIES
NextBio:890672 Uniprot:Q10914
Length = 977
Score = 189 (71.6 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 83/355 (23%), Positives = 147/355 (41%)
Query: 208 TDLEAFGISQNGPKLLQALSSIRFRG----LTGDYIF--VDGQLQSSAFEIINVNNGARG 261
T+ F ++G K+ +A+ + LTG F V G+ + + EI+ + G
Sbjct: 382 TESRQFETFEHGKKIAEAIKKVVLTDKDGTLTGRIQFDKVTGKRTNFSAEIVEIKPGVNS 441
Query: 262 VG-FWSPEKGXXXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGF 320
+ W + DS+ KG +P+ +LR V V
Sbjct: 442 LNSIWERFQWAEGEGFLLGGERYVQEK---KKDSSQTRKGI-LPSKPWQLRFNV-VTVLV 496
Query: 321 SDFVKVTI-DPKTQETS----VVGYSIDVFKAVIEELPYAVAYD-FVPYAQPDGT--SSG 372
FV + +P E GY ID+ + + + YD F+ G+ + G
Sbjct: 497 KPFVMLKRRNPGEPELKGNDRFEGYCIDLLNLLAKNIT-GFEYDVFISDGNKYGSRQADG 555
Query: 373 SYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFL 432
S++ +I + D V TI R VDF+ P+ +G+S+++ + ++ N + F+
Sbjct: 556 SWDGMIGYLLNETADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEFNIFSFM 615
Query: 433 QPLTWDLWV-TSGCFF---IFIGFVVWVLEHRVNEDF-RGPA----RHQVGTSFWFSFST 483
+PL +W+ T +F + I V W + +F RG + S WF+ +
Sbjct: 616 EPLGMTIWIFTLSSYFGVSLTIFLVSWFSPYEKRIEFKRGEFTVTNEFTLYNSLWFTLAA 675
Query: 484 MVFSQRE---RVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDV 535
+ + R +S R W F LI++ SYTA+L + LT++++ P I V
Sbjct: 676 FMQQGTDILPRAVSG--RIASSCWWFFTLIIVSSYTANLAAFLTLERMTPPIESV 728
Score = 90 (36.7 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 611 TM-VEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAGTV 669
TM V T G+G A + +PL ++ AIL ++E ++K++E+ W+ C D GT
Sbjct: 828 TMKVGQNLNTLGYGIATKIGNPLRVSLNLAILYLSEKGELKKLENKWWYDRGQC-DTGTS 886
Query: 670 VSARSLGLN 678
S LN
Sbjct: 887 DGGTSSSLN 895
>MGI|MGI:95814 [details] [associations]
symbol:Grik1 "glutamate receptor, ionotropic, kainate 1"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007399
"nervous system development" evidence=ISO] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=ISO;IC] [GO:0014054 "positive regulation of
gamma-aminobutyric acid secretion" evidence=IMP] [GO:0015277
"kainate selective glutamate receptor activity"
evidence=ISO;IGI;IDA;IMP] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=ISO] [GO:0022843 "voltage-gated cation
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0030534
"adult behavior" evidence=IMP] [GO:0032229 "negative regulation of
synaptic transmission, GABAergic" evidence=ISO] [GO:0032230
"positive regulation of synaptic transmission, GABAergic"
evidence=ISO;IMP] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IPI] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IGI;IDA;IMP] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IGI;IMP] [GO:0042391
"regulation of membrane potential" evidence=IDA;IMP] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043025 "neuronal cell
body" evidence=ISO] [GO:0043195 "terminal bouton" evidence=ISO]
[GO:0043235 "receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048169 "regulation of long-term neuronal synaptic plasticity"
evidence=TAS] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=ISO;TAS] [GO:0048266 "behavioral
response to pain" evidence=IMP] [GO:0051899 "membrane
depolarization" evidence=IMP] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=ISO;IGI] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IGI;IMP] [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IGI;IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95814 GO:GO:0051967
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0030425
GO:GO:0048266 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 GO:GO:0048169
InterPro:IPR001828 GO:GO:0048172 eggNOG:NOG316680 GO:GO:0005234
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:X66118
EMBL:U31444 IPI:IPI00122550 PIR:A41053 UniGene:Mm.5134
ProteinModelPortal:Q60934 SMR:Q60934 STRING:Q60934
PhosphoSite:Q60934 PRIDE:Q60934 UCSC:uc007zuw.2 CleanEx:MM_GRIK1
Genevestigator:Q60934 Uniprot:Q60934
Length = 836
Score = 193 (73.0 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 462 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 521
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 522 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 581
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 582 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 641
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 642 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 677
Score = 83 (34.3 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 32/125 (25%), Positives = 50/125 (40%)
Query: 153 RWKRKFLQENP----SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNAT 208
+W + LQ P L D + L YDA +A+A +A + VSS
Sbjct: 296 KWSMERLQAPPRPETGLLDGVMTTEAALMYDAVYMVAIASHRAS-------QLTVSS--L 346
Query: 209 DLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGFW 265
+ GP+ + + R+ GLTG F DG + +II++ G +G W
Sbjct: 347 QCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGIW 406
Query: 266 SPEKG 270
+ G
Sbjct: 407 NSNSG 411
Score = 39 (18.8 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 96 EKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDSM 131
E +IG+ N MTDG N R ++TDS+
Sbjct: 398 EGTEKIGIWNSNSGLNMTDG--N--RDRSNNITDSL 429
>ZFIN|ZDB-GENE-020125-3 [details] [associations]
symbol:gria2a "glutamate receptor, ionotropic, AMPA
2a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-020125-3 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05198 EMBL:AF525743
IPI:IPI00486705 RefSeq:NP_571969.1 UniGene:Dr.107958
ProteinModelPortal:Q71E63 SMR:Q71E63 PRIDE:Q71E63 GeneID:170450
KEGG:dre:170450 CTD:170450 InParanoid:Q71E63 NextBio:20797091
ArrayExpress:Q71E63 Bgee:Q71E63 Uniprot:Q71E63
Length = 875
Score = 198 (74.8 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 75/289 (25%), Positives = 130/289 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D V TI
Sbjct: 437 GYCVDLAAEIAKHCGFKYQLRIVADGKYGARDAETK-IWNGMVGELVYGKADIAVAPLTI 495
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 552
Query: 454 VWVLEHRVN------EDFR----GPAR--HQVG--TSFWFSFSTMVFSQRERVISNLA-R 498
V L R + E+F GP+ ++ G S WFS + + +L+ R
Sbjct: 553 VLFLVSRFSPYEWHTEEFEDGQLGPSESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGR 612
Query: 499 FVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILK 558
V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G K
Sbjct: 613 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDAGSTK 669
Query: 559 QLGFDERKLVVYNS---HEECDE--LFQKGSANGGIAAAFDEIPYAKLL 602
+ F K+ +++ + + E +F K + G + + YA LL
Sbjct: 670 EF-FRRSKIALFDKMWQYMKSAEPSVFVKNTVEGVLRVRKSKGKYAYLL 717
Score = 142 (55.0 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 56/206 (27%), Positives = 93/206 (45%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
S WFS + + +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 589 SLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIES 648
Query: 535 VNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNS---HEECDE--LFQKGSANGGI 589
L K+ + + Y G+ G K+ F K+ +++ + + E +F K + G +
Sbjct: 649 AEDLAKQTE-IAY--GTLDAGSTKEF-FRRSKIALFDKMWQYMKSAEPSVFVKNTVEGVL 704
Query: 590 AAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKAIL 641
+ YA LL I Q TM V + G+G A P S L + V+ A+L
Sbjct: 705 RVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNAVNLAVL 764
Query: 642 NVTEGDKMKEIEDAWFKKHSSCPDAG 667
+ E + ++++ W+ C G
Sbjct: 765 KLNEQGLLDKLKNKWWYDKGECGSGG 790
Score = 78 (32.5 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 56/268 (20%), Positives = 109/268 (40%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
G + ++++ + W + +Y D+ G + ++ D A + + ++ + L + D+
Sbjct: 129 GPLISLVEYYKWEKFAYLY-DSDRGLSTLQAVLDT--AAERKWQVTAINVGNLKDEWKDE 185
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMT-----DGMTNLL 120
+ L++ L R IL I E+ IG KG +I+ DG + +
Sbjct: 186 AYRSLFQDLENKNERRVILDCEQDKVKDIMEQVITIGRHVKGYHYIIANFGFVDGDLSKI 245
Query: 121 RTLEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDA 180
+ +V+ Q V P V K F RW+ +E P D+ + L YDA
Sbjct: 246 QYGGANVS-GFQIVDFDDPLVAK------FDQRWEALEEKEYPGA-DSRIRYTSALTYDA 297
Query: 181 TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
+ A + + + A +Q G ++ +AL +R GLTG+ F
Sbjct: 298 VQVMTEAFRFLHKQRIDISRRGNNGDCLANPAVPWAQ-GVEIERALKQVRVDGLTGNIQF 356
Query: 241 VD-GQLQSSAFEIINV-NNGARGVGFWS 266
G+ + ++ + N+G +G+W+
Sbjct: 357 DQYGRRVNYTVNVMELKNSGPVKIGYWN 384
>UNIPROTKB|G3V164 [details] [associations]
symbol:GRIA4 "Glutamate receptor, ionotrophic, AMPA 4,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CH471065 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AP000641
EMBL:AP000673 EMBL:AP000813 EMBL:AP001561 UniGene:Hs.503743
HGNC:HGNC:4574 ChiTaRS:GRIA4 EMBL:AP001023 SMR:G3V164
Ensembl:ENST00000393127 Ensembl:ENST00000525187 Uniprot:G3V164
Length = 884
Score = 199 (75.1 bits), Expect = 9.7e-15, Sum P(2) = 9.7e-15
Identities = 72/255 (28%), Positives = 119/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + VP Y D + +N ++ ++ G+ + + TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 560
Query: 454 VWVLEHRVN---------EDFR-GPAR---HQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + ED + GP+ ++ G S WFS F Q+ IS +L
Sbjct: 561 VLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSL 618
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 619 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSG 675
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 676 STKEF-FRRSKIAVY 689
Score = 143 (55.4 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 62/216 (28%), Positives = 97/216 (44%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 590 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 647
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY ++ E +
Sbjct: 648 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWTYMRSAEPSV 703
Query: 580 FQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSP 631
F + +A G + +A LL I Q TM V + G+G A P S
Sbjct: 704 FTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSS 763
Query: 632 LVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
L + V+ A+L + E + ++++ W+ C G
Sbjct: 764 LRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 799
Score = 77 (32.2 bits), Expect = 9.7e-15, Sum P(2) = 9.7e-15
Identities = 50/260 (19%), Positives = 99/260 (38%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GA+ +++ + W V +Y D G ++ ++ + V ++ D +
Sbjct: 140 GALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVSYRQ 196
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L +L Q + F++ I E+ +G KG +I+ + G ++ +LE +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLERFIH 254
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
V G + T + RWK+ +E P + L YD +A
Sbjct: 255 GGAN-VTGFQLVDFNTPMVIKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETF 312
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQS 247
+ + + A Q G + + L +R +GLTG+ F G+ +
Sbjct: 313 RSLRRQKIDISRRGNAGDCLANPAAPWGQ-GIDMERTLKQVRIQGLTGNVQFDHYGRRVN 371
Query: 248 SAFEIINVNN-GARGVGFWS 266
++ + + G R VG+W+
Sbjct: 372 YTMDVFELKSTGPRKVGYWN 391
Score = 38 (18.4 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 372 GSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTL--PY 409
G +ND+ V + + + DT + NR+ V + PY
Sbjct: 388 GYWNDMDKLVLIQDVPTLGNDTAAIENRTVVVTTIMESPY 427
>UNIPROTKB|P48058 [details] [associations]
symbol:GRIA4 "Glutamate receptor 4" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0032983
"kainate selective glutamate receptor complex" evidence=ISS]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISS]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=ISS]
[GO:0006810 "transport" evidence=TAS] [GO:0007215 "glutamate
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0030666 "endocytic vesicle membrane"
evidence=TAS] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0060992 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0043195 GO:GO:0051968
DrugBank:DB00142 GO:GO:0032281 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 EMBL:U16129 EMBL:AP000641
EMBL:AP000673 EMBL:AP000813 EMBL:AP001561 EMBL:BC045546
EMBL:BC142654 EMBL:BC150209 IPI:IPI00007632 IPI:IPI00791228
RefSeq:NP_000820.3 RefSeq:NP_001070711.2 RefSeq:NP_001070712.1
RefSeq:NP_001106283.1 UniGene:Hs.503743 ProteinModelPortal:P48058
SMR:P48058 MINT:MINT-95403 STRING:P48058 PhosphoSite:P48058
DMDM:218512059 PRIDE:P48058 DNASU:2893 Ensembl:ENST00000282499
Ensembl:ENST00000393125 Ensembl:ENST00000428631
Ensembl:ENST00000530497 GeneID:2893 KEGG:hsa:2893 UCSC:uc001pix.2
CTD:2893 GeneCards:GC11P105514 H-InvDB:HIX0026176 HGNC:HGNC:4574
MIM:138246 neXtProt:NX_P48058 PharmGKB:PA28969 InParanoid:P48058
KO:K05200 OMA:RIGYWND OrthoDB:EOG4DBTD0 PhylomeDB:P48058
BindingDB:P48058 ChEMBL:CHEMBL3190 ChiTaRS:GRIA4 GenomeRNAi:2893
NextBio:11443 ArrayExpress:P48058 Bgee:P48058 CleanEx:HS_GRIA4
Genevestigator:P48058 GO:GO:0032983 Uniprot:P48058
Length = 902
Score = 199 (75.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 72/255 (28%), Positives = 119/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + VP Y D + +N ++ ++ G+ + + TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 560
Query: 454 VWVLEHRVN---------EDFR-GPAR---HQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + ED + GP+ ++ G S WFS F Q+ IS +L
Sbjct: 561 VLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSL 618
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 619 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSG 675
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 676 STKEF-FRRSKIAVY 689
Score = 148 (57.2 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 66/230 (28%), Positives = 106/230 (46%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 590 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 647
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY ++ E +
Sbjct: 648 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWTYMRSAEPSV 703
Query: 580 FQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSP 631
F + +A G + +A LL I Q TM V + G+G A P S
Sbjct: 704 FTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSS 763
Query: 632 LVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC-P-DAGTVVSARSLGLNS 679
L V+ A+L ++E + ++++ W+ C P D+G+ +L L++
Sbjct: 764 LRTPVNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSN 813
Score = 77 (32.2 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 50/260 (19%), Positives = 99/260 (38%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GA+ +++ + W V +Y D G ++ ++ + V ++ D +
Sbjct: 140 GALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVSYRQ 196
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L +L Q + F++ I E+ +G KG +I+ + G ++ +LE +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLERFIH 254
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
V G + T + RWK+ +E P + L YD +A
Sbjct: 255 GGAN-VTGFQLVDFNTPMVIKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETF 312
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQS 247
+ + + A Q G + + L +R +GLTG+ F G+ +
Sbjct: 313 RSLRRQKIDISRRGNAGDCLANPAAPWGQ-GIDMERTLKQVRIQGLTGNVQFDHYGRRVN 371
Query: 248 SAFEIINVNN-GARGVGFWS 266
++ + + G R VG+W+
Sbjct: 372 YTMDVFELKSTGPRKVGYWN 391
Score = 38 (18.4 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 372 GSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTL--PY 409
G +ND+ V + + + DT + NR+ V + PY
Sbjct: 388 GYWNDMDKLVLIQDVPTLGNDTAAIENRTVVVTTIMESPY 427
>UNIPROTKB|Q38PU5 [details] [associations]
symbol:GRIA4 "Glutamate receptor 4" species:9541 "Macaca
fascicularis" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=ISS] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 HSSP:P19491
GO:GO:0032983 EMBL:DQ159932 ProteinModelPortal:Q38PU5 SMR:Q38PU5
Uniprot:Q38PU5
Length = 902
Score = 199 (75.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 72/255 (28%), Positives = 119/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + VP Y D + +N ++ ++ G+ + + TI
Sbjct: 445 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 560
Query: 454 VWVLEHRVN---------EDFR-GPAR---HQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + ED + GP+ ++ G S WFS F Q+ IS +L
Sbjct: 561 VLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSL 618
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 619 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSG 675
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 676 STKEF-FRRSKIAVY 689
Score = 143 (55.4 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 62/216 (28%), Positives = 97/216 (44%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 590 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 647
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY ++ E +
Sbjct: 648 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWTYMRSAEPSV 703
Query: 580 FQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSP 631
F + +A G + +A LL I Q TM V + G+G A P S
Sbjct: 704 FTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSS 763
Query: 632 LVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
L + V+ A+L + E + ++++ W+ C G
Sbjct: 764 LGNAVNLAVLKLNEPGLLDKLKNKWWYDKGECGSGG 799
Score = 77 (32.2 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 50/260 (19%), Positives = 99/260 (38%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GA+ +++ + W V +Y D G ++ ++ + V ++ D +
Sbjct: 140 GALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVSYRQ 196
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L +L Q + F++ I E+ +G KG +I+ + G ++ +LE +
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLERFIH 254
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
V G + T + RWK+ +E P + L YD +A
Sbjct: 255 GGAN-VTGFQLVDFNTPMVIKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETF 312
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQS 247
+ + + A Q G + + L +R +GLTG+ F G+ +
Sbjct: 313 RSLRRQKIDISRRGNAGDCLANPAAPWGQ-GIDMERTLKQVRIQGLTGNVQFDHYGRRVN 371
Query: 248 SAFEIINVNN-GARGVGFWS 266
++ + + G R VG+W+
Sbjct: 372 YTMDVFELKSTGPRKVGYWN 391
Score = 38 (18.4 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 372 GSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTL--PY 409
G +ND+ V + + + DT + NR+ V + PY
Sbjct: 388 GYWNDMDKLVLIQDVPTLGNDTAAIENRTVVVTTIMESPY 427
>ZFIN|ZDB-GENE-070821-5 [details] [associations]
symbol:grik4 "glutamate receptor, ionotropic, kainate
4" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070821-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:BX571886 EMBL:BX572079 EMBL:CR626883
EMBL:CU104717 IPI:IPI00505029 Ensembl:ENSDART00000035812
Uniprot:E7F1P4
Length = 965
Score = 163 (62.4 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 63/283 (22%), Positives = 122/283 (43%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
G+ +D+ K + + L + V Y P ++G++ ++ ++ + D V TI
Sbjct: 446 GFCVDMLKELADILKFKYRIRLVGDGVYGVPG--ANGTWTGMVGELISRKADLAVAALTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVW 455
R +DF+ P+ G+S++ + ++ + FL P + +W+ ++ + V++
Sbjct: 504 TAEREKVIDFSKPFMTLGISIMYRVHIGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLF 563
Query: 456 VLEHRVNEDFRGPA------------RHQVGTSFWFSFSTMVFSQRERVISNLA---RFV 500
++ ++ P ++ +G SFWF F Q+ I+ A R V
Sbjct: 564 LVARLTPYEWYNPHPCLKGRCSLLINQYSLGNSFWFPVGG--FMQQGSTIAPRALSTRCV 621
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN-LLIKRGDNVGYQKGSFVLGILKQ 559
VW LI+I SYTA+L + LTV +++ I V+ L + G G + +
Sbjct: 622 SGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGTMHGGSTMTFFQN 681
Query: 560 LGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPYAKLL 602
+ + + + + +F K S GIA + YA LL
Sbjct: 682 SRYQTYQRMWNFMYSKQPSVFVK-STEEGIARVLNS-NYAYLL 722
Score = 137 (53.3 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 57/222 (25%), Positives = 96/222 (43%)
Query: 470 RHQVGTSFWFSFSTMVFSQRERVISNLA---RFVVIVWCFVVLILIQSYTASLTSLLTVD 526
++ +G SFWF F Q+ I+ A R V VW LI+I SYTA+L + LTV
Sbjct: 590 QYSLGNSFWFPVGG--FMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQ 647
Query: 527 QLQPTITDVN-LLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSA 585
+++ I V+ L + G G + + + + + + + +F K S
Sbjct: 648 RMEVPIESVDDLADQTAIEYGTMHGGSTMTFFQNSRYQTYQRMWNFMYSKQPSVFVK-ST 706
Query: 586 NGGIAAAFDEIPYAKLLIG--------QHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVS 637
GIA + YA LL ++C+ T + T G+G PL S +
Sbjct: 707 EEGIARVLNS-NYAYLLESTMNEYYRQRNCN-LTQIGGLLDTKGYGIGMPLGSVYRDEFD 764
Query: 638 KAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
AIL + E ++++ ++ W+ CP A+ LG+ +
Sbjct: 765 LAILRLQEENRLEILKRKWWDG-GKCPKEEDH-RAKGLGMEN 804
Score = 124 (48.7 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 48/196 (24%), Positives = 88/196 (44%)
Query: 78 QTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDSMQGVIGV 137
+T I+ ++ I E+A+E+G+++ +I+T +LLR L+ + D ++G
Sbjct: 211 KTATIIVDANATMSHVILERASELGMLSVYYTYILTSLEFSLLR-LD-DLADQRVNIVGF 268
Query: 138 RPYVPKTKALENFRVRWKRKFLQENPSLFD-AELNIFGLLAYDATSALAVAVEKAGITGF 196
+ ++F + R + QEN A + L +DA + AV++ +
Sbjct: 269 SVFNRTHPFFQDFVLSLNRSW-QENCDHAPFAGTPLSSALLFDAVHTVVAAVQELNRS-- 325
Query: 197 GFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEII-N 254
NV + ++ I ++G L+ L + GLTG F GQ + A I+ N
Sbjct: 326 ----QNVGATQLSCKSSKIWEHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALRIMQN 381
Query: 255 VNNGARGVGFWSPEKG 270
+G R +G W E+G
Sbjct: 382 SRDGLRQIGQWHSEQG 397
Score = 37 (18.1 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 743 GIQVHGMGPTEASP 756
GI+V GP ASP
Sbjct: 933 GIRVRPSGPPGASP 946
>FB|FBgn0039916 [details] [associations]
symbol:CG9935 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0060025 "regulation
of synaptic activity" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
InterPro:IPR001828 EMBL:AE014135 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0015277 RefSeq:NP_001036250.1 UniGene:Dm.14094
ProteinModelPortal:Q0KIF2 SMR:Q0KIF2 STRING:Q0KIF2 PRIDE:Q0KIF2
EnsemblMetazoa:FBtr0110906 GeneID:43806 KEGG:dme:Dmel_CG9935
UCSC:CG9935-RB FlyBase:FBgn0039916 OMA:MISQIAN OrthoDB:EOG48CZB3
PhylomeDB:Q0KIF2 GenomeRNAi:43806 NextBio:835962 Bgee:Q0KIF2
Uniprot:Q0KIF2
Length = 899
Score = 205 (77.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 52/207 (25%), Positives = 99/207 (47%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
G+ +D+ + + E+ + D VP Y D +G +N ++ Q+ + D VG TI
Sbjct: 432 GFCVDILETISREVGFDYILDLVPDRKYGAKD-PETGEWNGMVAQLMKYKADLAVGSMTI 490
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWV--------TSGCFF 447
+ R + +DFT P+ G+S++ + S+ + F+ PL ++W+ S C +
Sbjct: 491 TYARESVIDFTKPFMNLGISILFKVPTSEPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIY 550
Query: 448 IF--IGFVVWVLEHRVN-EDFRGPARHQVGTSFWFSFSTMVFSQRE---RVISNLARFVV 501
I + + W + + E+ + + SFWF+ T + + R +S R +
Sbjct: 551 IVGKLSPIEWKCINACDLENISIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMST--RIIS 608
Query: 502 IVWCFVVLILIQSYTASLTSLLTVDQL 528
W F LI++ SYTA+L + LT +++
Sbjct: 609 STWGFFSLIIVASYTANLAAFLTTERM 635
Score = 139 (54.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 60/222 (27%), Positives = 97/222 (43%)
Query: 476 SFWFSFSTMVFSQRE---RVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
SFWF+ T + + R +S R + W F LI++ SYTA+L + LT +++ I
Sbjct: 582 SFWFTIGTFMQQSPDIYPRAMST--RIISSTWGFFSLIIVASYTANLAAFLTTERMINPI 639
Query: 533 TDVNLLIKRGDNVGY---QKGS---F----VLGILKQL--GFDERKLVVYNSHEECDELF 580
+ L + + + Y GS F V+ K++ D +K + + E D +
Sbjct: 640 ENAEDLASQTE-ISYGTLDSGSTMTFFRDSVIETYKKIWRSMDNKKPSAFTTTYE-DGIK 697
Query: 581 QKGSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAI 640
+ N G A E ++ + C+ T + T G+G A P SP +S AI
Sbjct: 698 R---VNQGNYAFLMESTMLDYIVQRDCN-LTQIGGLLDTKGYGIATPKGSPWRDKISLAI 753
Query: 641 LNVTEGDKMKEIEDAWFKK-HSSCPDAGTVVS--ARSLGLNS 679
L + E ++ + D W+K +C T A SLGL S
Sbjct: 754 LELQERGDIQMLYDKWWKNTDETCTRKNTSKQSKANSLGLES 795
Score = 70 (29.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 219 GPKLLQALSSIRFRGLTGDYIFVDGQLQSSAFEIINVN-NGARGVGFWSP 267
G L+ L+++ ++GLTG F DGQ ++I + + VG W+P
Sbjct: 334 GLSLINYLNAVEWKGLTGPIQFKDGQRVQFKLDLIKLKQHSIVKVGEWTP 383
>UNIPROTKB|I3L8N9 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:AEMK01190335 EMBL:CU855529
EMBL:CU972413 EMBL:FP312660 Ensembl:ENSSSCT00000027751
Uniprot:I3L8N9
Length = 883
Score = 199 (75.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 72/255 (28%), Positives = 119/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + VP Y D + +N ++ ++ G+ + + TI
Sbjct: 426 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 484
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 485 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 541
Query: 454 VWVLEHRVN---------EDFR-GPAR---HQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + ED + GP+ ++ G S WFS F Q+ IS +L
Sbjct: 542 VLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSL 599
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 600 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSG 656
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 657 STKEF-FRRSKIAVY 670
Score = 143 (55.4 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 62/216 (28%), Positives = 97/216 (44%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 571 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 628
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY ++ E +
Sbjct: 629 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWTYMRSAEPSV 684
Query: 580 FQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSP 631
F + +A G + +A LL I Q TM V + G+G A P S
Sbjct: 685 FTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSS 744
Query: 632 LVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
L + V+ A+L + E + ++++ W+ C G
Sbjct: 745 LRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 780
Score = 75 (31.5 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 49/260 (18%), Positives = 99/260 (38%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GA+ +++ + W V +Y D G ++ ++ + V ++ D +
Sbjct: 121 GALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS--AICVENFNDVSYRQ 177
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L +L Q + F++ I E+ +G KG +I+ + G ++ +LE +
Sbjct: 178 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLERFIH 235
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
V G + T + RWK+ +E P + L YD +A
Sbjct: 236 GGAN-VTGFQLVDFNTPMVTKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETF 293
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQS 247
+ + + A Q G + + L ++ +GLTG+ F G+ +
Sbjct: 294 RNLRRQKIDISRRGNAGDCLANPAAPWGQ-GIDMERTLKQVQIQGLTGNVQFDHYGRRVN 352
Query: 248 SAFEIINVNN-GARGVGFWS 266
++ + + G R VG+W+
Sbjct: 353 YTMDVFELKSTGPRKVGYWN 372
Score = 38 (18.4 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 372 GSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTL--PY 409
G +ND+ V + + + DT + NR+ V + PY
Sbjct: 369 GYWNDMDKLVLIQDVPTLGNDTAAIENRTVVVTTIMESPY 408
>UNIPROTKB|I3L9I7 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032590
"dendrite membrane" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0007616
"long-term memory" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0009986 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0035235 GO:GO:0007616
GO:GO:0032281 GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
EMBL:FP312836 Ensembl:ENSSSCT00000032251 OMA:SHERREQ Uniprot:I3L9I7
Length = 530
Score = 188 (71.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 70/255 (27%), Positives = 116/255 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y+ + V Y D + ++N ++ ++ G D V TI
Sbjct: 206 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 264
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 265 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 321
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F ++ G S WFS F Q+ IS +L
Sbjct: 322 VLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSL 379
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LT + P I L K+ + + Y G+ G
Sbjct: 380 SGRIVGGVWWFFTLIIISSYTANLAAFLTERMVSP-IESAEDLAKQTE-IAY--GTLEAG 435
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ V+
Sbjct: 436 STKEF-FRRSKIAVF 449
Score = 79 (32.9 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 176 LAYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLT 235
L YD +A A + + + + A Q G + +AL +RF GLT
Sbjct: 61 LTYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLT 119
Query: 236 GDYIFVD-GQLQSSAFEIINV-NNGARGVGFWSPE 268
G+ F + G+ + +I + ++G R +G+W+ +
Sbjct: 120 GNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 154
>UNIPROTKB|I3LT35 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0048266
GO:GO:0035235 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:CU861922
EMBL:FP325290 Ensembl:ENSSSCT00000028121 Uniprot:I3LT35
Length = 896
Score = 194 (73.4 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 57/216 (26%), Positives = 99/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ + D V TI +
Sbjct: 423 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITY 482
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 483 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 542
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 543 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 602
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 603 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 638
Score = 152 (58.6 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 72/316 (22%), Positives = 128/316 (40%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 520 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 578
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 579 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 638
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 639 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVK--NSDEGIQRVLTT-DY 694
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 695 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 754
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNSFWXXXXXXXXXXXXXXXXXXXVFVHE-HWNVL 710
+++ W++ + CP+ A +LG+ + F+++ N
Sbjct: 755 MKEKWWRGNG-CPEEDNK-EASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKNND 812
Query: 711 KNSESSLLSRIRIFLR 726
+ SRIR + R
Sbjct: 813 IEQQKGKSSRIRFYFR 828
Score = 79 (32.9 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 31/125 (24%), Positives = 50/125 (40%)
Query: 153 RWKRKFLQENP----SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNAT 208
+W + LQ P L D + L YDA +A+A +A + VSS
Sbjct: 257 KWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRAS-------QLTVSS--L 307
Query: 209 DLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGFW 265
+ GP+ + + ++ GLTG F DG + +II++ G +G W
Sbjct: 308 QCHRHKPWRLGPRFMNLIKEAQWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGIW 367
Query: 266 SPEKG 270
+ G
Sbjct: 368 NSNSG 372
Score = 38 (18.4 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 96 EKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDSMQGVIGV--RPYVPKTKA 146
E +IG+ N MTDG + + S+ + V + PYV K+
Sbjct: 359 EGTEKIGIWNSNSGLNMTDGNKDRSNNITDSLANRTLIVTTILEEPYVMYRKS 411
>UNIPROTKB|E1BXA6 [details] [associations]
symbol:GRID1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:LLPWICQ
EMBL:AADN02043560 EMBL:AADN02043561 EMBL:AADN02043562
EMBL:AADN02043563 IPI:IPI00574242 ProteinModelPortal:E1BXA6
Ensembl:ENSGALT00000002914 Uniprot:E1BXA6
Length = 800
Score = 220 (82.5 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 94/382 (24%), Positives = 159/382 (41%)
Query: 323 FVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGT-----SSGSYNDL 377
FV V + Q G+SIDV A+ + L + Y+ Y PDG +GS+N +
Sbjct: 239 FVMVAENILGQPKRYKGFSIDVLDALAKNLGFK--YEI--YQAPDGKYGHQLQNGSWNGM 294
Query: 378 IYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTW 437
I ++ D + TI R + VDF+ Y + V +++ K +K N + P +
Sbjct: 295 IGELINKRADLAISAITITPERESVVDFSKRYMDYSVGILIK-KPEEKINIFSLFAPFDF 353
Query: 438 DLWVTSGCFFIFIGFVVWVLEH----RV-NEDFRGP-ARHQVGTSFWFSFSTMVFSQRER 491
+W +G +++VL R N P A + ++ W + V E
Sbjct: 354 AVWACIAAAIPIVGVLIFVLNRIQAVRAQNASQPSPSASSTLHSAIWVVYGAFVQQGGES 413
Query: 492 VISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQK 549
++++A R V+ W LI+ SYTA+L + LTV ++ I L K+ D + G +
Sbjct: 414 TVNSVAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQMDISYGTVR 473
Query: 550 GSFVLGILKQLG---------FDE--RKLVVYNSHEECDELFQKG---SANGGIAAAFD- 594
S V K G F E R + N + C +G + G A +D
Sbjct: 474 DSAVYEYFKAKGTNPLEQDNTFAELWRTISKNNGADNCVSNPSEGIRKAKKGNYAFLWDV 533
Query: 595 EIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIED 654
+ L CS T++ + + G+G A SP S+ IL + E + ++
Sbjct: 534 TVVEYAALTDDECS-VTVIGNSISSKGYGIALQHGSPYRDLFSQRILELQESGDLDVLKQ 592
Query: 655 AWFKKHSSCPDAGTVVSARSLG 676
W+ + C D + +A++ G
Sbjct: 593 KWWPRMGRC-DLNSHTNAQTDG 613
>UNIPROTKB|E7EPZ0 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00792601
ProteinModelPortal:E7EPZ0 SMR:E7EPZ0 Ensembl:ENST00000399909
ArrayExpress:E7EPZ0 Bgee:E7EPZ0 Uniprot:E7EPZ0
Length = 903
Score = 193 (73.0 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 462 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 521
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 522 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 581
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 582 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 641
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 642 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 677
Score = 151 (58.2 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 65/268 (24%), Positives = 116/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 559 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 617
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 618 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 677
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 678 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVR--NSDEGIQRVLTT-DY 733
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 734 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 793
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ A +LG+ +
Sbjct: 794 MKEKWWRGNG-CPEEDNK-EASALGVEN 819
Score = 79 (32.9 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 31/125 (24%), Positives = 50/125 (40%)
Query: 153 RWKRKFLQENP----SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNAT 208
+W + LQ P L D + L YDA +A+A +A + VSS
Sbjct: 296 KWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRAS-------QLTVSS--L 346
Query: 209 DLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGFW 265
+ GP+ + + R+ GLTG F +G + +II++ G +G W
Sbjct: 347 QCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISLKEEGTEKIGIW 406
Query: 266 SPEKG 270
+ G
Sbjct: 407 NSNSG 411
>RGD|621531 [details] [associations]
symbol:Gria1 "glutamate receptor, ionotropic, AMPA 1"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0001965 "G-protein
alpha-subunit binding" evidence=IPI] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005769 "early
endosome" evidence=IDA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO;IDA] [GO:0007268
"synaptic transmission" evidence=ISO] [GO:0007616 "long-term
memory" evidence=ISO;IMP] [GO:0008021 "synaptic vesicle"
evidence=ISO] [GO:0008179 "adenylate cyclase binding" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex"
evidence=ISO;TAS] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009986 "cell surface" evidence=ISO] [GO:0010226
"response to lithium ion" evidence=IEP] [GO:0014069 "postsynaptic
density" evidence=ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0016020 "membrane" evidence=ISO]
[GO:0019228 "regulation of action potential in neuron"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0021510 "spinal cord development" evidence=IEP] [GO:0030054
"cell junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;ISS]
[GO:0031267 "small GTPase binding" evidence=IPI] [GO:0031489
"myosin V binding" evidence=IPI] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031623 "receptor internalization"
evidence=ISO;IDA] [GO:0031681 "G-protein beta-subunit binding"
evidence=IDA] [GO:0031698 "beta-2 adrenergic receptor binding"
evidence=IPI] [GO:0032279 "asymmetric synapse" evidence=IDA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=ISO;IDA]
[GO:0032355 "response to estradiol stimulus" evidence=IEP]
[GO:0032590 "dendrite membrane" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=NAS]
[GO:0042220 "response to cocaine" evidence=IEP] [GO:0042493
"response to drug" evidence=IEP] [GO:0042803 "protein
homodimerization activity" evidence=TAS] [GO:0043005 "neuron
projection" evidence=ISO;IDA] [GO:0043025 "neuronal cell body"
evidence=ISO;IDA] [GO:0043197 "dendritic spine" evidence=ISO;IDA]
[GO:0043198 "dendritic shaft" evidence=IDA] [GO:0043234 "protein
complex" evidence=IDA] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0044309 "neuron spine"
evidence=ISO;IDA] [GO:0045202 "synapse" evidence=IDA;IMP]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0045838
"positive regulation of membrane potential" evidence=IMP]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEP] [GO:0048167 "regulation of synaptic plasticity"
evidence=NAS;IMP] [GO:0050804 "regulation of synaptic transmission"
evidence=IDA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0051018 "protein kinase A binding"
evidence=IDA] [GO:0051602 "response to electrical stimulus"
evidence=IEP] [GO:0060076 "excitatory synapse" evidence=IDA]
[GO:0060992 "response to fungicide" evidence=IEP] [GO:0071230
"cellular response to amino acid stimulus" evidence=IEP]
[GO:0071359 "cellular response to dsRNA" evidence=IEP] [GO:0071363
"cellular response to growth factor stimulus" evidence=IEP]
[GO:0071375 "cellular response to peptide hormone stimulus"
evidence=IEP] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] [GO:0071418 "cellular response to amine
stimulus" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:621531
GO:GO:0005829 GO:GO:0048167 GO:GO:0042803 GO:GO:0014069
GO:GO:0071363 GO:GO:0005789 GO:GO:0046685 GO:GO:0042493
GO:GO:0032355 GO:GO:0060992 GO:GO:0010226 GO:GO:0042220
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0051602 GO:GO:0031594 GO:GO:0007616 GO:GO:0032279
GO:GO:0035249 GO:GO:0030288 GO:GO:0032281 GO:GO:0031623
GO:GO:0001919 GO:GO:0019228 GO:GO:0008179 GO:GO:0051018
GO:GO:0021510 GO:GO:0005769 GO:GO:0045838 InterPro:IPR001828
GO:GO:0071375 GO:GO:0060076 GO:GO:0071418 GO:GO:0071230
GO:GO:0050806 PDB:2AWW PDBsum:2AWW GO:GO:0031681 GO:GO:0004971
GO:GO:0005234 CTD:2890 HOVERGEN:HBG051839 KO:K05197 EMBL:X17184
EMBL:M36418 EMBL:M38060 IPI:IPI00231012 IPI:IPI00324555 PIR:A40170
PIR:S07059 RefSeq:NP_113796.1 UniGene:Rn.29971 PDB:3SAJ PDBsum:3SAJ
ProteinModelPortal:P19490 SMR:P19490 DIP:DIP-30929N IntAct:P19490
MINT:MINT-726538 TCDB:1.A.10.1.1 PhosphoSite:P19490 PRIDE:P19490
GeneID:50592 KEGG:rno:50592 UCSC:RGD:621531 BindingDB:P19490
ChEMBL:CHEMBL3753 EvolutionaryTrace:P19490 NextBio:610434
Genevestigator:P19490 GO:GO:0071359 Uniprot:P19490
Length = 907
Score = 198 (74.8 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 70/255 (27%), Positives = 118/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y+ + V Y D + ++N ++ ++ G D V TI
Sbjct: 437 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 495
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 552
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F ++ G S WFS F Q+ IS +L
Sbjct: 553 VLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSL 610
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 611 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAG 667
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ V+
Sbjct: 668 STKEF-FRRSKIAVF 681
Score = 146 (56.5 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 590 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 647
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V+ ++ + E +F + + G
Sbjct: 648 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 703
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
I + YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 704 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 763
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 764 VLKLNEQGLLDKLKNKWWYDKGECGSGG 791
Score = 79 (32.9 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 176 LAYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLT 235
L YD +A A + + + + A Q G + +AL +RF GLT
Sbjct: 292 LTYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLT 350
Query: 236 GDYIFVD-GQLQSSAFEIINV-NNGARGVGFWSPE 268
G+ F + G+ + +I + ++G R +G+W+ +
Sbjct: 351 GNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 385
Score = 40 (19.1 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 26 PIYVDNQYGEELIPSLTDALQAI 48
P+ NQ+ +L P L +AL +I
Sbjct: 114 PVDTSNQFVLQLRPELQEALISI 136
>UNIPROTKB|P19490 [details] [associations]
symbol:Gria1 "Glutamate receptor 1" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:621531 GO:GO:0005829
GO:GO:0048167 GO:GO:0042803 GO:GO:0014069 GO:GO:0071363
GO:GO:0005789 GO:GO:0046685 GO:GO:0042493 GO:GO:0032355
GO:GO:0060992 GO:GO:0010226 GO:GO:0042220 GO:GO:0043198
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0051602
GO:GO:0031594 GO:GO:0007616 GO:GO:0032279 GO:GO:0035249
GO:GO:0030288 GO:GO:0032281 GO:GO:0031623 GO:GO:0001919
GO:GO:0019228 GO:GO:0008179 GO:GO:0051018 GO:GO:0021510
GO:GO:0005769 GO:GO:0045838 InterPro:IPR001828 GO:GO:0071375
GO:GO:0060076 GO:GO:0071418 GO:GO:0071230 GO:GO:0050806 PDB:2AWW
PDBsum:2AWW GO:GO:0031681 GO:GO:0004971 GO:GO:0005234 CTD:2890
HOVERGEN:HBG051839 KO:K05197 EMBL:X17184 EMBL:M36418 EMBL:M38060
IPI:IPI00231012 IPI:IPI00324555 PIR:A40170 PIR:S07059
RefSeq:NP_113796.1 UniGene:Rn.29971 PDB:3SAJ PDBsum:3SAJ
ProteinModelPortal:P19490 SMR:P19490 DIP:DIP-30929N IntAct:P19490
MINT:MINT-726538 TCDB:1.A.10.1.1 PhosphoSite:P19490 PRIDE:P19490
GeneID:50592 KEGG:rno:50592 UCSC:RGD:621531 BindingDB:P19490
ChEMBL:CHEMBL3753 EvolutionaryTrace:P19490 NextBio:610434
Genevestigator:P19490 GO:GO:0071359 Uniprot:P19490
Length = 907
Score = 198 (74.8 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 70/255 (27%), Positives = 118/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +++ + + + Y+ + V Y D + ++N ++ ++ G D V TI
Sbjct: 437 GYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTK-AWNGMVGELVYGRADVAVAPLTI 495
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 552
Query: 454 VWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + E+F ++ G S WFS F Q+ IS +L
Sbjct: 553 VLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGA--FMQQGCDISPRSL 610
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 611 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLEAG 667
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ V+
Sbjct: 668 STKEF-FRRSKIAVF 681
Score = 146 (56.5 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 590 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 647
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V+ ++ + E +F + + G
Sbjct: 648 ESAEDLAKQTE-IAY--GTLEAGSTKEF-FRRSKIAVFEKMWTYMKSAEPSVFVRTTEEG 703
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
I + YA LL I Q TM V + G+G A P S L + V+ A
Sbjct: 704 MIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLA 763
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
+L + E + ++++ W+ C G
Sbjct: 764 VLKLNEQGLLDKLKNKWWYDKGECGSGG 791
Score = 79 (32.9 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 176 LAYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLT 235
L YD +A A + + + + A Q G + +AL +RF GLT
Sbjct: 292 LTYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQ-GIDIQRALQQVRFEGLT 350
Query: 236 GDYIFVD-GQLQSSAFEIINV-NNGARGVGFWSPE 268
G+ F + G+ + +I + ++G R +G+W+ +
Sbjct: 351 GNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNED 385
Score = 40 (19.1 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 26 PIYVDNQYGEELIPSLTDALQAI 48
P+ NQ+ +L P L +AL +I
Sbjct: 114 PVDTSNQFVLQLRPELQEALISI 136
>UNIPROTKB|D4ACE2 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00231401
ProteinModelPortal:D4ACE2 Ensembl:ENSRNOT00000002142
ArrayExpress:D4ACE2 Uniprot:D4ACE2
Length = 834
Score = 193 (73.0 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 393 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 452
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 453 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 512
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 513 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 572
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 573 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 608
Score = 153 (58.9 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 490 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 548
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 549 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 608
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 609 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVK--NSDEGIQRVLTT-DY 664
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 665 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 724
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ + A +LG+ +
Sbjct: 725 MKEKWWRGNG-CPEEDSK-EASALGVEN 750
Score = 78 (32.5 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 56/270 (20%), Positives = 99/270 (36%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ ++ + W+ +Y D+ G + L A + ++ R + P A D K
Sbjct: 89 AVLDLVLYYNWKTVTVVYEDST-GLIRLQELIKAPSRYNIKIKIRQL--PPANKDA--KP 143
Query: 71 LYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTD 129
L K +++ + I ++ +G+M + + T + LE
Sbjct: 144 LLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT-LDLFALDLE-LYRY 201
Query: 130 SMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSALA 185
S + G R + + +W + LQ P L D + L YDA +A
Sbjct: 202 SGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 261
Query: 186 VAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFR--GLTGDYIF--V 241
+A +A + VSS + GP+ + + R R GLTG F
Sbjct: 262 IASHRAS-------QLTVSS--LQCHRHKPWRLGPRFMNLIKEARARWDGLTGRITFNKT 312
Query: 242 DGQLQSSAFEIINVNN-GARGVGFWSPEKG 270
DG + +II++ G +G W+ G
Sbjct: 313 DGLRKDFDLDIISLKEEGTEKIGIWNSNSG 342
Score = 39 (18.8 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 96 EKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDSM 131
E +IG+ N MTDG N R ++TDS+
Sbjct: 329 EGTEKIGIWNSNSGLNMTDG--N--RDRSNNITDSL 360
>FB|FBgn0264000 [details] [associations]
symbol:GluRIB "Glutamate receptor IB" species:7227
"Drosophila melanogaster" [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0006812 "cation
transport" evidence=ISS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=ISS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0030054
GO:GO:0045211 GO:GO:0006812 InterPro:IPR001828 OrthoDB:EOG4WM38M
GO:GO:0008328 GO:GO:0004971 GO:GO:0005234 HSSP:P19491
FlyBase:FBgn0264000 EMBL:AJ251886 EMBL:AJ251887 SMR:Q9TVG7
STRING:Q9TVG7 InParanoid:Q9TVG7 Uniprot:Q9TVG7
Length = 1095
Score = 145 (56.1 bits), Expect = 2.9e-14, Sum P(4) = 2.9e-14
Identities = 54/205 (26%), Positives = 88/205 (42%)
Query: 473 VGTSFWFSFSTMVFSQRERVISNLA---RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQ 529
V SFWFS + F Q+ +S + R W F LILI SYTA+L + LTV+++
Sbjct: 739 VWNSFWFSLAA--FMQQGCDLSPRSVSGRIAAASWFFFTLILISSYTANLAAFLTVERM- 795
Query: 530 PTITDVNLLIKRGDNVGYQKGSFVLGIL------KQLGFDERKLVVYNSHEEC-----DE 578
+T +N Q G+ + G Q+G + NS + DE
Sbjct: 796 --VTPINSPEDLAMQTEVQYGTLLHGSTWDFFRRSQIGLHNKMWEYMNSRKHVFVPTYDE 853
Query: 579 LFQKGSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSK 638
++ + G A E P + + + V T GFG A PL S L ++
Sbjct: 854 GIKRVRNSKGKYALLVESPKNEYVNAREPCDTMKVGRNLDTKGFGIATPLGSALKDPINL 913
Query: 639 AILNVTEGDKMKEIEDAWFKKHSSC 663
A+L + E ++ ++ + W+ + + C
Sbjct: 914 AVLTLKENGELIKLRNKWWYEKAEC 938
Score = 109 (43.4 bits), Expect = 2.9e-14, Sum P(4) = 2.9e-14
Identities = 28/118 (23%), Positives = 56/118 (47%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY D+ + +EL V Y ++ G ++ ++ ++ E D + TI
Sbjct: 530 GYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDGMVGELVRKEADIAIAAMTI 589
Query: 396 VFNRSNYVDFTLPYTESGVSMIV--PIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIG 451
R +DF+ P+ G+S+++ P+K + + F+ PL+ ++WV+ F +IG
Sbjct: 590 TAERERVIDFSKPFMSLGISIMIKKPVKQTP--GVFSFMNPLSQEIWVS--VIFSYIG 643
Score = 62 (26.9 bits), Expect = 2.9e-14, Sum P(4) = 2.9e-14
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIIN--VNNGARGVGFWSPEKG 270
++G K+ + L + GLTGD F D G+ + ++ VN+ V W+ + G
Sbjct: 421 EHGDKISRYLRKVEIEGLTGDIKFNDDGRRVNYTLHVVEMTVNSAMVKVAEWNDDAG 477
Score = 50 (22.7 bits), Expect = 2.9e-14, Sum P(4) = 2.9e-14
Identities = 33/185 (17%), Positives = 71/185 (38%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYG----EELIPSLTDALQAIDTRVPYRSVISPLATDDQ 66
AI I+ +GWR+ + +Y D+ G +++ L ++ + R IS ++ +
Sbjct: 160 AIIDTIQFYGWRKIIYLY-DSHDGLLRLQQIYQGLRPGNESFQVELVKR--ISNVSMAIE 216
Query: 67 IEKELYKLFTMQTRVFILHMLPSLGSRIF-EKANEIGLMNKGCVWIMTDGMTNLLRTLEP 125
L ++ + + +L + +I + ++ L + ++++ G+ R
Sbjct: 217 FLHTLEQIGRFENKHIVLDCPTEMAKQILIQHVRDLRLGRRTYHYLLS-GLVMDDRWESE 275
Query: 126 SVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALA 185
+ + G R + + F WKR Q + ++ L YDA L
Sbjct: 276 IIEFGAINITGFRIVDTNRRLVREFYDSWKRLDPQMSVGAGRESISAQAALMYDAVFVLV 335
Query: 186 VAVEK 190
A K
Sbjct: 336 EAFNK 340
>UNIPROTKB|E7EPY9 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00790891
ProteinModelPortal:E7EPY9 SMR:E7EPY9 Ensembl:ENST00000399914
ArrayExpress:E7EPY9 Bgee:E7EPY9 Uniprot:E7EPY9
Length = 934
Score = 193 (73.0 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 462 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 521
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 522 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 581
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 582 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 641
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 642 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 677
Score = 154 (59.3 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 71/315 (22%), Positives = 127/315 (40%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 559 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 617
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 618 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 677
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 678 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVR--NSDEGIQRVLTT-DY 733
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 734 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 793
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNSFWXXXXXXXXXXXXXXXXXXXVFVHEHWNVLK 711
+++ W++ + CP+ A +LG+ + F+++
Sbjct: 794 MKEKWWRGNG-CPEEDNK-EASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKNND 851
Query: 712 NSESSLLSRIRIFLR 726
+ SRIR + R
Sbjct: 852 IEQKGKSSRIRFYFR 866
Score = 79 (32.9 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 31/125 (24%), Positives = 50/125 (40%)
Query: 153 RWKRKFLQENP----SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNAT 208
+W + LQ P L D + L YDA +A+A +A + VSS
Sbjct: 296 KWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRAS-------QLTVSS--L 346
Query: 209 DLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGFW 265
+ GP+ + + R+ GLTG F +G + +II++ G +G W
Sbjct: 347 QCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISLKEEGTEKIGIW 406
Query: 266 SPEKG 270
+ G
Sbjct: 407 NSNSG 411
>UNIPROTKB|F1PG03 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 EMBL:AAEX03003527 EMBL:AAEX03003528
Ensembl:ENSCAFT00000023554 Uniprot:F1PG03
Length = 740
Score = 199 (75.1 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 72/255 (28%), Positives = 119/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + VP Y D + +N ++ ++ G+ + + TI
Sbjct: 283 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 341
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 342 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 398
Query: 454 VWVLEHRVN---------EDFR-GPAR---HQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + ED + GP+ ++ G S WFS F Q+ IS +L
Sbjct: 399 VLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSL 456
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 457 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSG 513
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 514 STKEF-FRRSKIAVY 527
Score = 143 (55.4 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 62/216 (28%), Positives = 97/216 (44%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 428 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 485
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY ++ E +
Sbjct: 486 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWTYMRSAEPSV 541
Query: 580 FQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSP 631
F + +A G + +A LL I Q TM V + G+G A P S
Sbjct: 542 FTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSS 601
Query: 632 LVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
L + V+ A+L + E + ++++ W+ C G
Sbjct: 602 LRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 637
Score = 69 (29.3 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 41/199 (20%), Positives = 76/199 (38%)
Query: 71 LYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVTD 129
L +L Q + F++ I E+ +G KG +I+ + G ++ +LE +
Sbjct: 36 LEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDI--SLERFIHG 93
Query: 130 SMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAVE 189
V G + T + RWK+ +E P + L YD +A
Sbjct: 94 GAN-VTGFQLVDFNTPMVTKLMDRWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETFR 151
Query: 190 KAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSS 248
+ + + A Q G + + L +R +GLTG+ F G+ +
Sbjct: 152 NLRRQKIDISRRGNAGDCLANPAAPWGQ-GIDMERTLKQVRIQGLTGNVQFDHYGRRVNY 210
Query: 249 AFEIINVNN-GARGVGFWS 266
++ + + G R VG+W+
Sbjct: 211 TMDVFELKSTGPRKVGYWN 229
Score = 38 (18.4 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 372 GSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTL--PY 409
G +ND+ V + + + DT + NR+ V + PY
Sbjct: 226 GYWNDMDKLVLIQDVPTLGNDTAAIENRTVVVTTIMESPY 265
>UNIPROTKB|B4GF83 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7234 "Drosophila persimilis" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH479182 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002017168.1
ProteinModelPortal:B4GF83 EnsemblMetazoa:FBtr0187775 GeneID:6591341
KEGG:dpe:Dper_GL22160 FlyBase:FBgn0159752 Uniprot:B4GF83
Length = 1004
Score = 161 (61.7 bits), Expect = 5.3e-14, Sum P(3) = 5.3e-14
Identities = 66/291 (22%), Positives = 128/291 (43%)
Query: 387 DAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF 446
D +V TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 537 DMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVS 595
Query: 447 FIFIGFVVWVLEH-----RV---NEDFRGPARHQVGTSFWFSFSTMVFSQ-RERVISNL- 496
+ V+++L+ R + D + ++ WF++ ++ S E +
Sbjct: 596 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 655
Query: 497 ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRG--DNV--GYQKGSF 552
AR + +VW +I++ SYTA+L + L +++ + ++ +N R +N+ KGS
Sbjct: 656 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 715
Query: 553 V-LGILKQLGFDER-KLVVYNSHEECDELFQKGSANGGIAAAFDEIPYAKLLIGQHCSKY 610
V + +Q+ + + N++ ++ Q G + A + + + C
Sbjct: 716 VDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSSRLEYEASKDCELV 774
Query: 611 TMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW-FKKH 660
T E F +G+G SP V+ AIL E M++++ W F H
Sbjct: 775 TAGE-LFGRSGYGVGLQKGSPWTDSVTLAILEFHESGFMEKLDKQWIFHGH 824
Score = 83 (34.3 bits), Expect = 5.3e-14, Sum P(3) = 5.3e-14
Identities = 28/99 (28%), Positives = 42/99 (42%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWSPEKGXXX 273
++G +L Q L S G TG F D G + +++IN+ + VG +S +
Sbjct: 344 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREHQKKHVVGKFSYDS---- 399
Query: 274 XXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRV 312
IIWPG P+G IPT+ K L +
Sbjct: 400 -MRAKMRMNINDSEIIWPGKQNRKPEGIMIPTHLKVLTI 437
Score = 74 (31.1 bits), Expect = 5.3e-14, Sum P(3) = 5.3e-14
Identities = 21/104 (20%), Positives = 47/104 (45%)
Query: 15 IIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLAT-DDQIE---KE 70
++ F + + + I+ + G ++ Q V R+ + + + ++E +
Sbjct: 179 MLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEH 238
Query: 71 LYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 114
L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 239 LIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 282
>UNIPROTKB|Q296F7 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0004970
"ionotropic glutamate receptor activity" evidence=ISS] [GO:0007268
"synaptic transmission" evidence=ISS] [GO:0007616 "long-term
memory" evidence=ISS] [GO:0008355 "olfactory learning"
evidence=ISS] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=ISS] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISS] [GO:0042391 "regulation
of membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0008355
GO:GO:0014069 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0007616 GO:GO:0042391 EMBL:CM000070 InterPro:IPR001828
GO:GO:0055074 GenomeReviews:CM000070_GR GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 HSSP:P19491 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH
RefSeq:XP_001359355.1 ProteinModelPortal:Q296F7 GeneID:4802433
KEGG:dpo:Dpse_GA15505 FlyBase:FBgn0075522 InParanoid:Q296F7
Uniprot:Q296F7
Length = 1004
Score = 161 (61.7 bits), Expect = 5.3e-14, Sum P(3) = 5.3e-14
Identities = 66/291 (22%), Positives = 128/291 (43%)
Query: 387 DAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF 446
D +V TI R+ Y++F+ P+ G++ I+ K S+ FLQP + LW+
Sbjct: 537 DMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVS 595
Query: 447 FIFIGFVVWVLEH-----RV---NEDFRGPARHQVGTSFWFSFSTMVFSQ-RERVISNL- 496
+ V+++L+ R + D + ++ WF++ ++ S E +
Sbjct: 596 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 655
Query: 497 ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRG--DNV--GYQKGSF 552
AR + +VW +I++ SYTA+L + L +++ + ++ +N R +N+ KGS
Sbjct: 656 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 715
Query: 553 V-LGILKQLGFDER-KLVVYNSHEECDELFQKGSANGGIAAAFDEIPYAKLLIGQHCSKY 610
V + +Q+ + + N++ ++ Q G + A + + + C
Sbjct: 716 VDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSSRLEYEASKDCELV 774
Query: 611 TMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW-FKKH 660
T E F +G+G SP V+ AIL E M++++ W F H
Sbjct: 775 TAGE-LFGRSGYGVGLQKGSPWTDSVTLAILEFHESGFMEKLDKQWIFHGH 824
Score = 83 (34.3 bits), Expect = 5.3e-14, Sum P(3) = 5.3e-14
Identities = 28/99 (28%), Positives = 42/99 (42%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWSPEKGXXX 273
++G +L Q L S G TG F D G + +++IN+ + VG +S +
Sbjct: 344 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREHQKKHVVGKFSYDS---- 399
Query: 274 XXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRV 312
IIWPG P+G IPT+ K L +
Sbjct: 400 -MRAKMRMNINDSEIIWPGKQNRKPEGIMIPTHLKVLTI 437
Score = 74 (31.1 bits), Expect = 5.3e-14, Sum P(3) = 5.3e-14
Identities = 21/104 (20%), Positives = 47/104 (45%)
Query: 15 IIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLAT-DDQIE---KE 70
++ F + + + I+ + G ++ Q V R+ + + + ++E +
Sbjct: 179 MLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEH 238
Query: 71 LYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 114
L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 239 LIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 282
>ZFIN|ZDB-GENE-020125-7 [details] [associations]
symbol:gria4a "glutamate receptor, ionotropic, AMPA
4a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-7 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0030425 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05200 EMBL:AF525747
IPI:IPI01016706 RefSeq:NP_999971.1 UniGene:Dr.89716
ProteinModelPortal:Q71E59 SMR:Q71E59 GeneID:407735 KEGG:dre:407735
CTD:407735 NextBio:20818588 Uniprot:Q71E59
Length = 898
Score = 184 (69.8 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 67/254 (26%), Positives = 110/254 (43%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ V + + V Y D + +N ++ ++ G+ + V I
Sbjct: 439 GYCVDLASEVAKHIGIKYKISIVLDGKYGARDPETK-IWNGMVGELVYGKAEIAVAPLAI 497
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 498 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 554
Query: 454 VWVLEHRVN----------EDFRGPARHQ------VGTSFWFSFSTMVFSQRERVISNLA 497
V L R + E GP Q + S WFS + + +L+
Sbjct: 555 VLFLVSRFSPYEWHTEEPEEGSDGPPSDQPPNEFGIFNSLWFSLGAFMQQGCDFTPRSLS 614
Query: 498 -RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGI 556
R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 615 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGS 671
Query: 557 LKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 672 TKEF-FRRSKIAVY 684
Score = 158 (60.7 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 65/230 (28%), Positives = 109/230 (47%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVD 526
P + S WFS + + +L+ R V VW F LI+I SYTA+L + LTV+
Sbjct: 585 PNEFGIFNSLWFSLGAFMQQGCDFTPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVE 644
Query: 527 QLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQ 581
++ I L K+ + + Y G+ G K+ F K+ VY S+ + E +F
Sbjct: 645 RMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWSYMKSAEPTVFT 700
Query: 582 KGSANGGIAAAFDEIPYAKLLIGQHCSKYT-MVEP--TFKTAG------FGFAFPLHSPL 632
K +A G + YA L+ ++YT +P T K G +G A P S L
Sbjct: 701 KTTAEGVARVRKSKGKYA-FLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGSQL 759
Query: 633 VHDVSKAILNVTEGDKMKEIEDAWFKKHSSC-P-DAGTV-VSARSLGLNS 679
V+ A+L ++E + ++++ W+ C P D+G+ S+++L L++
Sbjct: 760 GTPVNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKSSQALSLSN 809
Score = 85 (35.0 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 51/261 (19%), Positives = 105/261 (40%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GA+ +++ + W V +Y D G ++ ++ + +V ++ D +
Sbjct: 135 GALLSLLDHYDWSRFVFLY-DTDRGYAVLQAIMEKAGQNGWQVS--AICVENFNDASYRR 191
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
L L Q + F++ + I E+ +G KG +I+ + G ++ +LE +
Sbjct: 192 LLEDLDRRQEKKFVIDLEAERLQNILEQIVSVGKHVKGYHYIVANLGFKDI--SLERFMH 249
Query: 129 DSMQGVIGVRPYVPKTKALE-NFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVA 187
V G + V +K + RW + +E P ++ L YD +A A
Sbjct: 250 GGAN-VTGFQ-LVDFSKPMVIKLMQRWNKLDQREYPGS-ESPPRYTSSLTYDGVLVMAEA 306
Query: 188 VEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQ 246
+ + + A +Q G + + L +R +GLTG+ F G+
Sbjct: 307 FRNLRRQKIDISRRGNAGDCLANPAAPWNQ-GIDMERTLKQVRIQGLTGNIQFDHYGRRV 365
Query: 247 SSAFEIINV-NNGARGVGFWS 266
+ ++ + +NG R +G+W+
Sbjct: 366 NYTMDVFELKSNGPRKIGYWN 386
>UNIPROTKB|B3LZ39 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7217 "Drosophila ananassae" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH902617 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 RefSeq:XP_001953330.1
ProteinModelPortal:B3LZ39 STRING:B3LZ39 EnsemblMetazoa:FBtr0122404
GeneID:6500487 KEGG:dan:Dana_GF17704 FlyBase:FBgn0094722
InParanoid:B3LZ39 KO:K05208 OrthoDB:EOG4RXWF5 InterPro:IPR018882
Pfam:PF10562 Uniprot:B3LZ39
Length = 994
Score = 161 (61.7 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 68/304 (22%), Positives = 133/304 (43%)
Query: 374 YNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQ 433
+ LI ++ D +V TI R+ Y++F+ P+ G++ I+ K S+ FLQ
Sbjct: 509 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQ 567
Query: 434 PLTWDLWVTSGCFFIFIGFVVWVLEH-----RV---NEDFRGPARHQVGTSFWFSFSTMV 485
P + LW+ + V+++L+ R + D + ++ WF++ ++
Sbjct: 568 PFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLL 627
Query: 486 FSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRG- 542
S E + AR + +VW +I++ SYTA+L + L +++ + ++ +N R
Sbjct: 628 NSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNT 687
Query: 543 -DNV--GYQKGSFV-LGILKQLGFDER-KLVVYNSHEECDELFQKGSANGGIAAAFDEIP 597
+N+ KGS V + +Q+ + + N++ ++ Q G + A +
Sbjct: 688 MENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSS 746
Query: 598 YAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW- 656
+ + C T E F +G+G SP V+ AIL E M++++ W
Sbjct: 747 RLEYEASKDCELVTAGE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 805
Query: 657 FKKH 660
F H
Sbjct: 806 FHGH 809
Score = 82 (33.9 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 28/99 (28%), Positives = 42/99 (42%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWSPEKGXXX 273
++G +L Q L S G TG F D G + +++IN+ + VG +S +
Sbjct: 329 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSYDNERAK 388
Query: 274 XXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRV 312
IIWPG P+G IPT+ K L +
Sbjct: 389 MRMRINDSE-----IIWPGKQRRKPEGIMIPTHLKVLTI 422
Score = 74 (31.1 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 21/104 (20%), Positives = 47/104 (45%)
Query: 15 IIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLAT-DDQIE---KE 70
++ F + + + I+ + G ++ Q V R+ + + + ++E +
Sbjct: 164 MLSHFSYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEH 223
Query: 71 LYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 114
L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 224 LIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 267
>UNIPROTKB|B3P2E5 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7220 "Drosophila erecta" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH954181 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_001978937.1
ProteinModelPortal:B3P2E5 EnsemblMetazoa:FBtr0131035 GeneID:6552207
KEGG:der:Dere_GG10981 FlyBase:FBgn0103284 Uniprot:B3P2E5
Length = 997
Score = 161 (61.7 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 68/304 (22%), Positives = 133/304 (43%)
Query: 374 YNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQ 433
+ LI ++ D +V TI R+ Y++F+ P+ G++ I+ K S+ FLQ
Sbjct: 512 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQ 570
Query: 434 PLTWDLWVTSGCFFIFIGFVVWVLEH-----RV---NEDFRGPARHQVGTSFWFSFSTMV 485
P + LW+ + V+++L+ R + D + ++ WF++ ++
Sbjct: 571 PFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLL 630
Query: 486 FSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRG- 542
S E + AR + +VW +I++ SYTA+L + L +++ + ++ +N R
Sbjct: 631 NSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNT 690
Query: 543 -DNV--GYQKGSFV-LGILKQLGFDER-KLVVYNSHEECDELFQKGSANGGIAAAFDEIP 597
+N+ KGS V + +Q+ + + N++ ++ Q G + A +
Sbjct: 691 MENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSS 749
Query: 598 YAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW- 656
+ + C T E F +G+G SP V+ AIL E M++++ W
Sbjct: 750 RLEYEASKDCELVTAGE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 808
Query: 657 FKKH 660
F H
Sbjct: 809 FHGH 812
Score = 82 (33.9 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 28/99 (28%), Positives = 42/99 (42%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWSPEKGXXX 273
++G +L Q L S G TG F D G + +++IN+ + VG +S +
Sbjct: 332 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSYDS---- 387
Query: 274 XXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRV 312
IIWPG P+G IPT+ K L +
Sbjct: 388 -MRAKMRMRINDSEIIWPGKQRRKPEGIMIPTHLKLLTI 425
Score = 74 (31.1 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 21/104 (20%), Positives = 47/104 (45%)
Query: 15 IIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLAT-DDQIE---KE 70
++ F + + + I+ + G ++ Q V R+ + + + ++E +
Sbjct: 167 MLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEH 226
Query: 71 LYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 114
L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 227 LIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
>UNIPROTKB|B4I414 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7238 "Drosophila sechellia" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH480821 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002038420.1
ProteinModelPortal:B4I414 EnsemblMetazoa:FBtr0193612 GeneID:6613956
KEGG:dse:Dsec_GM10627 FlyBase:FBgn0165573 Uniprot:B4I414
Length = 997
Score = 161 (61.7 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 68/304 (22%), Positives = 133/304 (43%)
Query: 374 YNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQ 433
+ LI ++ D +V TI R+ Y++F+ P+ G++ I+ K S+ FLQ
Sbjct: 512 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQ 570
Query: 434 PLTWDLWVTSGCFFIFIGFVVWVLEH-----RV---NEDFRGPARHQVGTSFWFSFSTMV 485
P + LW+ + V+++L+ R + D + ++ WF++ ++
Sbjct: 571 PFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLL 630
Query: 486 FSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRG- 542
S E + AR + +VW +I++ SYTA+L + L +++ + ++ +N R
Sbjct: 631 NSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNT 690
Query: 543 -DNV--GYQKGSFV-LGILKQLGFDER-KLVVYNSHEECDELFQKGSANGGIAAAFDEIP 597
+N+ KGS V + +Q+ + + N++ ++ Q G + A +
Sbjct: 691 MENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSS 749
Query: 598 YAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW- 656
+ + C T E F +G+G SP V+ AIL E M++++ W
Sbjct: 750 RLEYEASKDCELVTAGE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 808
Query: 657 FKKH 660
F H
Sbjct: 809 FHGH 812
Score = 82 (33.9 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 28/99 (28%), Positives = 42/99 (42%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWSPEKGXXX 273
++G +L Q L S G TG F D G + +++IN+ + VG +S +
Sbjct: 332 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSYDS---- 387
Query: 274 XXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRV 312
IIWPG P+G IPT+ K L +
Sbjct: 388 -MRAKMRMRINDSEIIWPGKQRRKPEGIMIPTHLKLLTI 425
Score = 74 (31.1 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 21/104 (20%), Positives = 47/104 (45%)
Query: 15 IIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLAT-DDQIE---KE 70
++ F + + + I+ + G ++ Q V R+ + + + ++E +
Sbjct: 167 MLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEH 226
Query: 71 LYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 114
L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 227 LIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
>UNIPROTKB|B4PVB0 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7245 "Drosophila yakuba" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
EMBL:CM000160 InterPro:IPR001828 GO:GO:0055074 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_002096067.1 ProteinModelPortal:B4PVB0 STRING:B4PVB0
EnsemblMetazoa:FBtr0271792 GeneID:6535418 KEGG:dya:Dyak_GE25274
FlyBase:FBgn0242356 Uniprot:B4PVB0
Length = 997
Score = 161 (61.7 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 68/304 (22%), Positives = 133/304 (43%)
Query: 374 YNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQ 433
+ LI ++ D +V TI R+ Y++F+ P+ G++ I+ K S+ FLQ
Sbjct: 512 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQ 570
Query: 434 PLTWDLWVTSGCFFIFIGFVVWVLEH-----RV---NEDFRGPARHQVGTSFWFSFSTMV 485
P + LW+ + V+++L+ R + D + ++ WF++ ++
Sbjct: 571 PFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLL 630
Query: 486 FSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRG- 542
S E + AR + +VW +I++ SYTA+L + L +++ + ++ +N R
Sbjct: 631 NSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNT 690
Query: 543 -DNV--GYQKGSFV-LGILKQLGFDER-KLVVYNSHEECDELFQKGSANGGIAAAFDEIP 597
+N+ KGS V + +Q+ + + N++ ++ Q G + A +
Sbjct: 691 MENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSS 749
Query: 598 YAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW- 656
+ + C T E F +G+G SP V+ AIL E M++++ W
Sbjct: 750 RLEYEASKDCELVTAGE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 808
Query: 657 FKKH 660
F H
Sbjct: 809 FHGH 812
Score = 82 (33.9 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 28/99 (28%), Positives = 42/99 (42%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWSPEKGXXX 273
++G +L Q L S G TG F D G + +++IN+ + VG +S +
Sbjct: 332 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSYDS---- 387
Query: 274 XXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRV 312
IIWPG P+G IPT+ K L +
Sbjct: 388 -MRAKMRMRINDSEIIWPGKQRRKPEGIMIPTHLKLLTI 425
Score = 74 (31.1 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 21/104 (20%), Positives = 47/104 (45%)
Query: 15 IIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLAT-DDQIE---KE 70
++ F + + + I+ + G ++ Q V R+ + + + ++E +
Sbjct: 167 MLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEH 226
Query: 71 LYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 114
L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 227 LIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
>UNIPROTKB|B4QWW7 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7240 "Drosophila simulans" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CM000364 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002102226.1
ProteinModelPortal:B4QWW7 EnsemblMetazoa:FBtr0219522 GeneID:6726819
KEGG:dsi:Dsim_GD19612 FlyBase:FBgn0191104 Uniprot:B4QWW7
Length = 997
Score = 161 (61.7 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 68/304 (22%), Positives = 133/304 (43%)
Query: 374 YNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQ 433
+ LI ++ D +V TI R+ Y++F+ P+ G++ I+ K S+ FLQ
Sbjct: 512 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQ 570
Query: 434 PLTWDLWVTSGCFFIFIGFVVWVLEH-----RV---NEDFRGPARHQVGTSFWFSFSTMV 485
P + LW+ + V+++L+ R + D + ++ WF++ ++
Sbjct: 571 PFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLL 630
Query: 486 FSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRG- 542
S E + AR + +VW +I++ SYTA+L + L +++ + ++ +N R
Sbjct: 631 NSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNT 690
Query: 543 -DNV--GYQKGSFV-LGILKQLGFDER-KLVVYNSHEECDELFQKGSANGGIAAAFDEIP 597
+N+ KGS V + +Q+ + + N++ ++ Q G + A +
Sbjct: 691 MENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSS 749
Query: 598 YAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW- 656
+ + C T E F +G+G SP V+ AIL E M++++ W
Sbjct: 750 RLEYEASKDCELVTAGE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 808
Query: 657 FKKH 660
F H
Sbjct: 809 FHGH 812
Score = 82 (33.9 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 28/99 (28%), Positives = 42/99 (42%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWSPEKGXXX 273
++G +L Q L S G TG F D G + +++IN+ + VG +S +
Sbjct: 332 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSYDS---- 387
Query: 274 XXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRV 312
IIWPG P+G IPT+ K L +
Sbjct: 388 -MRAKMRMRINDSEIIWPGKQRRKPEGIMIPTHLKLLTI 425
Score = 74 (31.1 bits), Expect = 6.5e-14, Sum P(3) = 6.5e-14
Identities = 21/104 (20%), Positives = 47/104 (45%)
Query: 15 IIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLAT-DDQIE---KE 70
++ F + + + I+ + G ++ Q V R+ + + + ++E +
Sbjct: 167 MLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEH 226
Query: 71 LYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 114
L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 227 LIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
>UNIPROTKB|Q5R4M0 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9601 "Pongo
abelii" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005789 GO:GO:0030054
GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 EMBL:CR861226
UniGene:Pab.364 ProteinModelPortal:Q5R4M0 SMR:Q5R4M0 PRIDE:Q5R4M0
InParanoid:Q5R4M0 Uniprot:Q5R4M0
Length = 883
Score = 182 (69.1 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 66/255 (25%), Positives = 116/255 (45%)
Query: 339 GYSIDVFKAVIEELPY----AVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTT 394
GY +D+ + + + +A D Y D + +N ++ ++ G+ D + T
Sbjct: 444 GYCVDLAAEIAKHCGFKYKLTIAGDG-KYGARDADTK-IWNGMVGELVYGKADIAIAPLT 501
Query: 395 IVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF- 452
I R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG
Sbjct: 502 ITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLYPLAYEIWM---CIVFAYIGVS 558
Query: 453 VVWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVFSQRERVISNLA 497
VV L R + E+F + ++ G S WFS + + +L+
Sbjct: 559 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMRQGCDISPRSLS 618
Query: 498 -RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGI 556
R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 619 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE-IAY--GTLDSGS 675
Query: 557 LKQLGFDERKLVVYN 571
K+ F K+ V++
Sbjct: 676 TKEF-FRRSKIAVFD 689
Score = 142 (55.0 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 60/220 (27%), Positives = 101/220 (45%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
S WFS + + +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 597 SLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIES 656
Query: 535 VNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANGGI 589
L K+ + + Y G+ G K+ F K+ V++ ++ E +F + +A G
Sbjct: 657 AEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVA 712
Query: 590 AAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKAIL 641
+ YA LL I Q TM V + G+G A P S L V+ A+L
Sbjct: 713 RVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGTPVNLAVL 772
Query: 642 NVTEGDKMKEIEDAWFKKHSSC--PDAGTVVSARSLGLNS 679
++E + ++++ W+ C D+G+ +L L++
Sbjct: 773 KLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 812
Score = 86 (35.3 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 54/266 (20%), Positives = 109/266 (40%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSV-ISPLATD--DQ 66
GA+ ++I+ + W + +Y D+ G + ++ D+ A + + ++ + + D D+
Sbjct: 134 GALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDS--AAEKKWQVTAINVGNINNDKKDE 190
Query: 67 IEKELYK-LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTN--LLRT 122
+ + L++ L + R IL + I ++ IG KG +I+ + G T+ LL+
Sbjct: 191 MYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANLGFTDGDLLK- 249
Query: 123 LEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATS 182
+ V G + + F RW +E P + L Y A
Sbjct: 250 ----IQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEYPGAHTTTIKYTSALTYYAVQ 305
Query: 183 ALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-V 241
+ A + + + A Q G ++ +AL ++ GL+G+ F
Sbjct: 306 VMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQ-GVEIERALKQVQVEGLSGNIKFDQ 364
Query: 242 DGQLQSSAFEIINVN-NGARGVGFWS 266
+G+ + I+ + NG R +G+WS
Sbjct: 365 NGKRINYTINIMELKTNGPRKIGYWS 390
>FB|FBgn0038837 [details] [associations]
symbol:CG3822 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0060025 "regulation of synaptic activity" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0015277 HSSP:P19491 OrthoDB:EOG4FQZ6P
EMBL:AY119103 ProteinModelPortal:Q8MS48 SMR:Q8MS48 PaxDb:Q8MS48
PRIDE:Q8MS48 FlyBase:FBgn0038837 InParanoid:Q8MS48
ArrayExpress:Q8MS48 Bgee:Q8MS48 Uniprot:Q8MS48
Length = 853
Score = 213 (80.0 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 68/262 (25%), Positives = 116/262 (44%)
Query: 295 TSDPKGWEIPTNEK-KLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELP 353
T K EI N K K V + K + P + GY++D+ + + L
Sbjct: 401 TFSQKQQEIEANLKNKTLVVTTILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLG 460
Query: 354 YAVAYDFVPYAQPDGTS--SGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTE 411
+ VP + +G +N +I ++ D + D TI F R VDFT P+
Sbjct: 461 FNYKIQLVPDGSYGSLNKLTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMN 520
Query: 412 SGVSMIV--PIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVL------EHRVNE 463
GVS++ PIK N + FL PL+ D+W+ ++ + ++++L E
Sbjct: 521 LGVSILYRKPIKQPP--NLFSFLSPLSLDVWIYMATAYLGVSVLLFILAKFTPYEWPAYT 578
Query: 464 DFRGP---ARHQVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASL 519
D G ++ + WF+ +++ + + L+ R V +W F LI+I SYTA+L
Sbjct: 579 DAHGEKVESQFTLLNCMWFAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANL 638
Query: 520 TSLLTVDQLQPTITDVNLLIKR 541
+ LTV+++ I L K+
Sbjct: 639 AAFLTVERMDSPIESAEDLAKQ 660
Score = 130 (50.8 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 49/195 (25%), Positives = 84/195 (43%)
Query: 478 WFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
WF+ +++ + + L+ R V +W F LI+I SYTA+L + LTV+++ I
Sbjct: 596 WFAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAE 655
Query: 537 LLIKR----------GDNVGYQKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGS 584
L K+ G + + S + + F E R V S+ E E KG
Sbjct: 656 DLAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTVSNGEGVERVAKGK 715
Query: 585 ANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVT 644
+ I Y + ++C + T V T +G A P +SP ++ IL +
Sbjct: 716 GSYAFLMESTSIEY---VTERNC-ELTQVGGMLDTKSYGIATPPNSPYRTAINSVILKLQ 771
Query: 645 EGDKMKEIEDAWFKK 659
E K+ ++ W+K+
Sbjct: 772 EEGKLHILKTKWWKE 786
Score = 53 (23.7 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 54/262 (20%), Positives = 99/262 (37%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A I++ +GW+ IY +N G I L + L+A P+ + L+
Sbjct: 147 AYVDIVRHWGWKTFTIIYENND-G---IVRLQELLKA-HGMTPFPITVRQLSDSGDYRPL 201
Query: 71 LYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDS 130
L ++ +L + ++A +IG+M+ +++T + + E +
Sbjct: 202 LKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTSLDLHTVNLDEFRYGGT 261
Query: 131 MQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFG---LLAYDATSALAVA 187
+ G R + K + + +W + E L A L L YDA A A
Sbjct: 262 --NITGFR--LINEKIVSDVVRQWS---IDEKGLLRSANLTTVRSETALMYDAVHLFAKA 314
Query: 188 VEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVDGQLQS 247
+ T D +S + G S L+ + + +GLT + I D Q
Sbjct: 315 LHDLD-TSQQIDIHPISCDGQSTWQHGFS-----LINYMKIVEMKGLT-NVIKFDHQGFR 367
Query: 248 SAF--EIINVNN-GARGVGFWS 266
+ F +I+ + G R +G W+
Sbjct: 368 ADFMLDIVELTPAGIRKIGTWN 389
>UNIPROTKB|E1C2Q1 [details] [associations]
symbol:GRIK4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0042734 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
GO:GO:0032983 OMA:NRAPERL EMBL:AADN02041869 EMBL:AADN02041870
IPI:IPI00596764 ProteinModelPortal:E1C2Q1
Ensembl:ENSGALT00000010723 Uniprot:E1C2Q1
Length = 869
Score = 162 (62.1 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 51/216 (23%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
G+ +D+ K + E L + V Y P+ ++G++ ++ ++ + D V TI
Sbjct: 431 GFCVDMLKELAEILRFNYKIHLVGDGVYGVPE--ANGTWTGMVGELIARKADLAVAGLTI 488
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVW 455
R +DF+ P+ G+S++ + +K + FL P + +W+ ++ + V++
Sbjct: 489 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLF 548
Query: 456 VLEHRVNEDFRGPA------------RHQVGTSFWFSFSTMVFSQRERVISNLA---RFV 500
++ ++ P ++ +G S WF F Q+ I+ A R V
Sbjct: 549 LVARLTPYEWYSPHPCSQGRCNLLINQYSLGNSLWFPVGG--FMQQGSTIAPQALSTRCV 606
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
VW LI+I SYTA+L + LTV ++ I V+
Sbjct: 607 SGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVD 642
Score = 128 (50.1 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 69/290 (23%), Positives = 119/290 (41%)
Query: 470 RHQVGTSFWFSFSTMVFSQRERVISNLA---RFVVIVWCFVVLILIQSYTASLTSLLTVD 526
++ +G S WF F Q+ I+ A R V VW LI+I SYTA+L + LTV
Sbjct: 575 QYSLGNSLWFPVGG--FMQQGSTIAPQALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQ 632
Query: 527 QLQPTITDVNLLIKRGD-NVGYQKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSA 585
++ I V+ L + G G + + + + + + + +F K S
Sbjct: 633 RMDVPIESVDDLADQTTIEYGTIHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVFVK-ST 691
Query: 586 NGGIAAAFDEIPYAKLLIG--------QHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVS 637
GIA + YA LL ++C+ T V T G+G P+ S +
Sbjct: 692 EEGIARVLNS-NYAFLLESTMNEYYRQRNCN-LTQVGGLLDTKGYGIGMPVGSVFRDEFD 749
Query: 638 KAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNSFWXXXXXXXXXXXXXXXX 697
AIL + E ++++ ++ W++ CP A+ LG+ +
Sbjct: 750 LAILQLQENNRLEILKRKWWEG-GKCPKEEDH-RAKGLGMENIGGIFVVLICGLIVAIFM 807
Query: 698 XXXVFVHEHWNVL--KNSESSLLSRIRIFLR-IFVSRDLSAHTFKDKGGI 744
F+ W++ + SE S+ + LR I + +D S H + +GG+
Sbjct: 808 AMLEFL---WSLRHSEQSEVSVCQEMVTELRNIILCKD-SFHPRRRRGGM 853
Score = 106 (42.4 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 47/197 (23%), Positives = 86/197 (43%)
Query: 78 QTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDSMQGVIGV 137
+T I+H S+ I +KA E+G+ + +I T+ +L R L+ + D + ++G
Sbjct: 196 KTATIIVHANASMSHTILQKAAELGMASAYYTYIFTNLEFSLQR-LDSQLDDRVN-ILGF 253
Query: 138 RPYVPKTKALENFRVRWKRKFLQEN--PSLFDAELNIFGLLAYDATSALAVAVEKAGITG 195
+ + F V+ + QEN + F + L +DA A+ AV++ +
Sbjct: 254 SIFNQSHAFFQEF-VQSLNQSWQENCDHAPFTGPA-LSSALLFDAVYAVVSAVQELNRS- 310
Query: 196 FGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEII- 253
+ + I Q+G L+ L + GLTG F GQ + A +I+
Sbjct: 311 -----QEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQ 365
Query: 254 NVNNGARGVGFWSPEKG 270
+ ++G R +G W +G
Sbjct: 366 HTHSGFRQIGHWHVSEG 382
>FB|FBgn0004619 [details] [associations]
symbol:GluRIA "Glutamate receptor IA" species:7227
"Drosophila melanogaster" [GO:0006812 "cation transport"
evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0016021 "integral
to membrane" evidence=NAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;NAS] InterPro:IPR001320 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 SMART:SM00079 SMART:SM00918 Pfam:PF01094
EMBL:AE014296 GO:GO:0030054 GO:GO:0045211 GO:GO:0006812
InterPro:IPR001828 EMBL:M97192 EMBL:BT003218 EMBL:BT050435
PIR:A46421 RefSeq:NP_476855.1 UniGene:Dm.6460
ProteinModelPortal:Q03445 SMR:Q03445 STRING:Q03445 PaxDb:Q03445
EnsemblMetazoa:FBtr0076982 GeneID:38742 KEGG:dme:Dmel_CG8442
CTD:38742 FlyBase:FBgn0004619 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 InParanoid:Q03445 KO:K05313
OMA:EWRIVRR OrthoDB:EOG4WM38M PhylomeDB:Q03445 GenomeRNAi:38742
NextBio:810146 Bgee:Q03445 GermOnline:CG8442 GO:GO:0008328
GO:GO:0004971 GO:GO:0005234 Uniprot:Q03445
Length = 991
Score = 157 (60.3 bits), Expect = 1.2e-13, Sum P(4) = 1.2e-13
Identities = 55/198 (27%), Positives = 90/198 (45%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQL-QPTIT 533
SFW+S + + + ++A R VW F +ILI SYTA+L + LTV+++ P T
Sbjct: 683 SFWYSLAAFMQQGCDITPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTVERMVAPIKT 742
Query: 534 DVNLLIKRGDNVG-YQKGS-FVLGILKQLGFDERKLVVY---NSHEEC---DELFQKGSA 585
+L ++ N G GS + Q+G K+ Y N H DE ++
Sbjct: 743 PEDLTMQTDVNYGTLLYGSTWEFFRRSQIGL-HNKMWEYMNANQHHSVHTYDEGIRRVRQ 801
Query: 586 NGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTE 645
+ G A E P + + + V T GFG A P+ SPL +++A+L + E
Sbjct: 802 SKGKYALLVESPKNEYVNARPPCDTMKVGRNIDTKGFGVATPIGSPLRKRLNEAVLTLKE 861
Query: 646 GDKMKEIEDAWFKKHSSC 663
++ I + W+ + C
Sbjct: 862 NGELLRIRNKWWFDKTEC 879
Score = 109 (43.4 bits), Expect = 1.2e-13, Sum P(4) = 1.2e-13
Identities = 21/95 (22%), Positives = 50/95 (52%)
Query: 363 YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIV--PI 420
Y + + G ++ ++ ++ E D + TI R +DF+ P+ G+S+++ P+
Sbjct: 537 YGAENQYAPGGWDGMVGELIRKEADIAISAMTITAERERVIDFSKPFMTLGISIMIKKPV 596
Query: 421 KDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVW 455
K + + FL PL+ ++W++ ++ + FV++
Sbjct: 597 KQTP--GVFSFLNPLSQEIWISVILSYVGVSFVLY 629
Score = 54 (24.1 bits), Expect = 1.2e-13, Sum P(4) = 1.2e-13
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIF-VDGQLQSSAFEII--NVNNGARGVGFWSPEKG 270
+ G K+ + L + GL+G+ F DG+ + ++ +VN+ + V W + G
Sbjct: 395 EQGEKISRVLRKVEIDGLSGEIRFDEDGRRINYTLHVVEMSVNSTLQQVAEWRDDAG 451
Score = 37 (18.1 bits), Expect = 1.2e-13, Sum P(4) = 1.2e-13
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYG 34
AI I+ +GW+ + +Y D+ G
Sbjct: 158 AIIDTIQYYGWQSIIYLY-DSHDG 180
>FB|FBgn0010399 [details] [associations]
symbol:Nmdar1 "NMDA receptor 1" species:7227 "Drosophila
melanogaster" [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=ISS;IDA;NAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IGI;IMP] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IPI] [GO:0007616
"long-term memory" evidence=IGI;IMP] [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0072375 "medium-term memory"
evidence=IMP] [GO:0008306 "associative learning" evidence=IDA]
[GO:0042331 "phototaxis" evidence=IDA] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] [GO:0050975 "sensory
perception of touch" evidence=IMP] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 EMBL:AE014297 GO:GO:0008355
GO:GO:0014069 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0042331 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
GO:GO:0007476 GO:GO:0072375 InterPro:IPR001828 GO:GO:0055074
GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GeneTree:ENSGT00700000104113 GO:GO:0004972 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH
EMBL:X71790 EMBL:AY070577 PIR:S33754 RefSeq:NP_730940.1
UniGene:Dm.3670 HSSP:Q05586 ProteinModelPortal:Q24418 SMR:Q24418
STRING:Q24418 PRIDE:Q24418 EnsemblMetazoa:FBtr0078763 GeneID:40665
KEGG:dme:Dmel_CG2902 UCSC:CG2902-RA CTD:40665 FlyBase:FBgn0010399
HOGENOM:HOG000184780 InParanoid:Q24418 PhylomeDB:Q24418
GenomeRNAi:40665 NextBio:819920 Bgee:Q24418 Uniprot:Q24418
Length = 997
Score = 161 (61.7 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 68/304 (22%), Positives = 133/304 (43%)
Query: 374 YNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQ 433
+ LI ++ D +V TI R+ Y++F+ P+ G++ I+ K S+ FLQ
Sbjct: 512 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQ 570
Query: 434 PLTWDLWVTSGCFFIFIGFVVWVLEH-----RV---NEDFRGPARHQVGTSFWFSFSTMV 485
P + LW+ + V+++L+ R + D + ++ WF++ ++
Sbjct: 571 PFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLL 630
Query: 486 FSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRG- 542
S E + AR + +VW +I++ SYTA+L + L +++ + ++ +N R
Sbjct: 631 NSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNT 690
Query: 543 -DNV--GYQKGSFV-LGILKQLGFDER-KLVVYNSHEECDELFQKGSANGGIAAAFDEIP 597
+N+ KGS V + +Q+ + + N++ ++ Q G + A +
Sbjct: 691 MENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQAIQDVK-KGKLMAFIWDSS 749
Query: 598 YAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW- 656
+ + C T E F +G+G SP V+ AIL E M++++ W
Sbjct: 750 RLEYEASKDCELVTAGE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 808
Query: 657 FKKH 660
F H
Sbjct: 809 FHGH 812
Score = 79 (32.9 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 27/99 (27%), Positives = 42/99 (42%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWSPEKGXXX 273
++G +L Q L S G TG F D G + +++IN+ + VG +S +
Sbjct: 332 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSYDS---- 387
Query: 274 XXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRV 312
IIWPG P+G IPT+ + L +
Sbjct: 388 -MRAKMRMRINDSEIIWPGKQRRKPEGIMIPTHLRLLTI 425
Score = 74 (31.1 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 21/104 (20%), Positives = 47/104 (45%)
Query: 15 IIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLAT-DDQIE---KE 70
++ F + + + I+ + G ++ Q V R+ + + + ++E +
Sbjct: 167 MLSHFAYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEH 226
Query: 71 LYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 114
L + T Q+RV++++ IF A E + +G VWI+T+
Sbjct: 227 LIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
>ZFIN|ZDB-GENE-020125-4 [details] [associations]
symbol:gria2b "glutamate receptor, ionotropic, AMPA
2b" species:7955 "Danio rerio" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-020125-4 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234372 HOVERGEN:HBG051839
HSSP:P19491 EMBL:AF361751 IPI:IPI00513119 UniGene:Dr.81161
ProteinModelPortal:Q90XP6 SMR:Q90XP6 InParanoid:Q90XP6
ArrayExpress:Q90XP6 Uniprot:Q90XP6
Length = 897
Score = 186 (70.5 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 73/289 (25%), Positives = 129/289 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G+ D V TI
Sbjct: 441 GYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETK-IWNGMVGELVYGKADIAVAPLTI 499
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 500 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 556
Query: 454 VWVLEHRVN------EDFR------GPARHQVG--TSFWFSFSTMVFSQRERVISNL-AR 498
V L R + E++ + ++ G S WFS + + +L R
Sbjct: 557 VLFLVSRFSPYEWHTEEYEDGQIQTNESTNEFGIFNSLWFSLGAFMRQGCDISPRSLPGR 616
Query: 499 FVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILK 558
V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G K
Sbjct: 617 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSGSTK 673
Query: 559 QLGFDERKLVVYN---SHEECDE--LFQKGSANGGIAAAFDEIPYAKLL 602
+ F K+ +++ ++ + E +F K +A G + + YA LL
Sbjct: 674 EF-FRRSKIALFDKMWTYMKGAEPSVFVKTTAEGVMRVRKSKGKYAYLL 721
Score = 139 (54.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 57/206 (27%), Positives = 94/206 (45%)
Query: 476 SFWFSFSTMVFSQRERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
S WFS + + +L R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 593 SLWFSLGAFMRQGCDISPRSLPGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIES 652
Query: 535 VNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANGGI 589
L K+ + + Y G+ G K+ F K+ +++ ++ + E +F K +A G +
Sbjct: 653 AEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIALFDKMWTYMKGAEPSVFVKTTAEGVM 708
Query: 590 AAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKAIL 641
+ YA LL I Q TM V + G+G A P S L + V+ A+L
Sbjct: 709 RVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLAVL 768
Query: 642 NVTEGDKMKEIEDAWFKKHSSCPDAG 667
+ E + ++++ W+ C G
Sbjct: 769 KLNEQGLLDKLKNKWWYDKGECGTGG 794
Score = 79 (32.9 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 28/122 (22%), Positives = 53/122 (43%)
Query: 147 LENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSN 206
+ F RW+ +E P D+++ L YDA + A + + +
Sbjct: 269 VSKFDQRWEALEEKEYPGA-DSKIRYTSALTYDAVQVMTEAFRYLHKQRIDISRRANNGD 327
Query: 207 ATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINV-NNGARGVGF 264
A +Q G ++ +AL +R GLTG+ F G+ + ++ + +NGA +G+
Sbjct: 328 CLANPAVPWAQ-GVEIERALKQVRVDGLTGNIQFDQYGKRVNYTVHVMELKSNGAVKIGY 386
Query: 265 WS 266
W+
Sbjct: 387 WN 388
>UNIPROTKB|Q16099 [details] [associations]
symbol:GRIK4 "Glutamate receptor ionotropic, kainate 4"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007215
"glutamate receptor signaling pathway" evidence=TAS] [GO:0015277
"kainate selective glutamate receptor activity" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005634 GO:GO:0005887 EMBL:CH471065 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0043204
GO:GO:0042734 GO:GO:0043195 DrugBank:DB00142 InterPro:IPR001828
GO:GO:0031960 eggNOG:NOG316680 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:S67803
EMBL:AK292726 IPI:IPI00292269 PIR:JH0826 RefSeq:NP_055434.2
UniGene:Hs.568901 ProteinModelPortal:Q16099 SMR:Q16099
STRING:Q16099 TCDB:1.A.10.1.9 PhosphoSite:Q16099 DMDM:209572625
PaxDb:Q16099 PRIDE:Q16099 Ensembl:ENST00000438375
Ensembl:ENST00000527524 GeneID:2900 KEGG:hsa:2900 UCSC:uc001pxn.2
CTD:2900 GeneCards:GC11P120480 H-InvDB:HIX0036043 HGNC:HGNC:4582
MIM:600282 neXtProt:NX_Q16099 PharmGKB:PA28976 InParanoid:Q16099
KO:K05204 OMA:NRAPERL PhylomeDB:Q16099 BindingDB:Q16099
ChEMBL:CHEMBL2829 GenomeRNAi:2900 NextBio:11479 Bgee:Q16099
CleanEx:HS_GRIK4 Genevestigator:Q16099 GermOnline:ENSG00000149403
Uniprot:Q16099
Length = 956
Score = 161 (61.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 51/216 (23%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
G+ +D+ K + E L + V Y P+ ++G++ ++ ++ + D V TI
Sbjct: 446 GFCVDMLKELAEILRFNYKIRLVGDGVYGVPE--ANGTWTGMVGELIARKADLAVAGLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVW 455
R +DF+ P+ G+S++ + +K + FL P + +W+ ++ + V++
Sbjct: 504 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLF 563
Query: 456 VLEHRVNEDFRGPA------------RHQVGTSFWFSFSTMVFSQRERVISNLA---RFV 500
++ ++ P ++ +G S WF F Q+ I+ A R V
Sbjct: 564 LVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGG--FMQQGSTIAPRALSTRCV 621
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
VW LI+I SYTA+L + LTV ++ I V+
Sbjct: 622 SGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVD 657
Score = 127 (49.8 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 58/226 (25%), Positives = 96/226 (42%)
Query: 470 RHQVGTSFWFSFSTMVFSQRERVISNLA---RFVVIVWCFVVLILIQSYTASLTSLLTVD 526
++ +G S WF F Q+ I+ A R V VW LI+I SYTA+L + LTV
Sbjct: 590 QYSLGNSLWFPVGG--FMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQ 647
Query: 527 QLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNS-----HEECDELFQ 581
++ I V+ L D + G+ + G F + Y + + +F
Sbjct: 648 RMDVPIESVDDL---ADQTAIEYGT-IHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVFV 703
Query: 582 KGSANGGIAAAFDEIPYAKLLIG--------QHCSKYTMVEPTFKTAGFGFAFPLHSPLV 633
K S GIA + YA LL ++C+ T + T G+G P+ S
Sbjct: 704 K-STEEGIARVLNS-NYAFLLESTMNEYYRQRNCN-LTQIGGLLDTKGYGIGMPVGSVFR 760
Query: 634 HDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ AIL + E ++++ ++ W++ CP A+ LG+ +
Sbjct: 761 DEFDLAILQLQENNRLEILKRKWWEG-GKCPKEEDH-RAKGLGMEN 804
Score = 105 (42.0 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 47/197 (23%), Positives = 80/197 (40%)
Query: 78 QTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDSMQGVIGV 137
+T I+H S+ I KA E+G+++ +I T+ +L R S+ D ++G
Sbjct: 211 KTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRM--DSLVDDRVNILGF 268
Query: 138 RPYVPKTKALENFRVRWKRKFLQENPSL--FDAELNIFGLLAYDATSALAVAVEKAGITG 195
+ + F + + QEN F + L +DA A+ AV++ +
Sbjct: 269 SIFNQSHAFFQEFAQSLNQSW-QENCDHVPFTGPA-LSSALLFDAVYAVVTAVQELNRS- 325
Query: 196 FGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIIN 254
+ + I Q+G L+ L + GLTG F GQ + A +I+
Sbjct: 326 -----QEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQ 380
Query: 255 -VNNGARGVGFWSPEKG 270
NG R +G W +G
Sbjct: 381 FTRNGFRQIGQWHVAEG 397
>WB|WBGene00001614 [details] [associations]
symbol:glr-3 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 eggNOG:NOG316680 KO:K05313 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371
HSSP:P19491 EMBL:Z75545 PIR:T23570 RefSeq:NP_492017.3
UniGene:Cel.19345 ProteinModelPortal:Q21415 SMR:Q21415
EnsemblMetazoa:K10D3.1 GeneID:172449 KEGG:cel:CELE_K10D3.1
UCSC:K10D3.1 CTD:172449 WormBase:K10D3.1 InParanoid:Q21415
OMA:RIVINIP NextBio:875561 ArrayExpress:Q21415 Uniprot:Q21415
Length = 836
Score = 219 (82.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 66/255 (25%), Positives = 119/255 (46%)
Query: 332 TQETSVVGYSIDVFKAVIEELPYAVAYDFV-PYAQPDGTSSGSYNDLIYQVFLGEFDAVV 390
T S GY ID+ + L + V A S+G ++ ++ ++ G+ D V
Sbjct: 417 TSNGSYEGYCIDLLHKIANILKFTYTIQKVRDNAYGSKESNGKWSGMVGELQRGDADLAV 476
Query: 391 GDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNA-WV-FLQPLTWDLWVTSGCFFI 448
TI + RS +DFT+PY G+S++ K + R++ W F+ PL+ +W+ + +
Sbjct: 477 ASLTISYGRSEVIDFTVPYMHLGISIL--FKKPRIRDSDWFKFMDPLSTQVWIMTFASYF 534
Query: 449 FIGFVVWVL------EHRVNEDFRG---PARHQVG--TSFWFSFSTMVFSQRERVISNLA 497
+ +W++ E ++ G P +Q SFWF+ +++ Q + A
Sbjct: 535 VVSVAIWIIAKISPYEQFERDEDNGQYKPVDNQFSLRNSFWFTVCSLM-QQGSELCPRAA 593
Query: 498 --RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
R + +W F LILI SYTA+L ++LT +++ I + + L + + Y G+ G
Sbjct: 594 STRLLTGIWWFFALILISSYTANLAAVLTTRRMETPIENADDLAAQ-TKIKY--GTLGRG 650
Query: 556 ILKQLGFDERKLVVY 570
F+E K+ Y
Sbjct: 651 STMSF-FNESKIETY 664
Score = 137 (53.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 50/198 (25%), Positives = 87/198 (43%)
Query: 476 SFWFSFSTMVFSQRERVISNLA--RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTIT 533
SFWF+ +++ Q + A R + +W F LILI SYTA+L ++LT +++ I
Sbjct: 573 SFWFTVCSLM-QQGSELCPRAASTRLLTGIWWFFALILISSYTANLAAVLTTRRMETPIE 631
Query: 534 DVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNSH----EECDELFQKGSANGGI 589
+ + L + + Y G+ G F+E K+ Y LF + S G
Sbjct: 632 NADDLAAQ-TKIKY--GTLGRGSTMSF-FNESKIETYERMWQLMSSSPGLFVQSSKEGIA 687
Query: 590 AAAFDEIPY---AKLL---IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNV 643
+ Y + +L + + C + + G+G P SP +S AIL +
Sbjct: 688 RVKSSDYAYLMESSMLEYAVERDC-ELMQIGGLIDQKGYGIGLPKGSPYRELISTAILRL 746
Query: 644 TEGDKMKEIEDAWFKKHS 661
E ++ E+++ W+K S
Sbjct: 747 QEKTELTELKEKWWKDKS 764
Score = 43 (20.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQA 47
A+ A IK W++ V ++ + +EL+ +TD + A
Sbjct: 138 AVAAFIKREKWKDVVVVFEEP---DELL-EITDMITA 170
>UNIPROTKB|F1PHA8 [details] [associations]
symbol:GRIK4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2900 KO:K05204 OMA:NRAPERL EMBL:AAEX03003415
EMBL:AAEX03003416 EMBL:AAEX03003417 EMBL:AAEX03003418
EMBL:AAEX03003419 RefSeq:XP_853030.3 Ensembl:ENSCAFT00000018877
GeneID:610429 KEGG:cfa:610429 Uniprot:F1PHA8
Length = 956
Score = 161 (61.7 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 51/216 (23%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
G+ +D+ K + E L + V Y P+ ++G++ ++ ++ + D V TI
Sbjct: 446 GFCVDMLKELAEILRFNYKIRLVGDGVYGVPE--ANGTWTGMVGELIARKADLAVAGLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVW 455
R +DF+ P+ G+S++ + +K + FL P + +W+ ++ + V++
Sbjct: 504 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLF 563
Query: 456 VLEHRVNEDFRGPA------------RHQVGTSFWFSFSTMVFSQRERVISNLA---RFV 500
++ ++ P ++ +G S WF F Q+ I+ A R V
Sbjct: 564 LVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGG--FMQQGSTIAPRALSTRCV 621
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
VW LI+I SYTA+L + LTV ++ I V+
Sbjct: 622 SGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVD 657
Score = 130 (50.8 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 76/319 (23%), Positives = 128/319 (40%)
Query: 470 RHQVGTSFWFSFSTMVFSQRERVISNLA---RFVVIVWCFVVLILIQSYTASLTSLLTVD 526
++ +G S WF F Q+ I+ A R V VW LI+I SYTA+L + LTV
Sbjct: 590 QYSLGNSLWFPVGG--FMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQ 647
Query: 527 QLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNS-----HEECDELFQ 581
++ I V+ L D + G+ + G F + Y + + +F
Sbjct: 648 RMDVPIESVDDL---ADQTAIEYGT-IHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVFV 703
Query: 582 KGSANGGIAAAFDEIPYAKLLIG--------QHCSKYTMVEPTFKTAGFGFAFPLHSPLV 633
K S GIA + YA LL ++C+ T + T G+G P+ S
Sbjct: 704 K-STEEGIARVLNS-NYAFLLESTMNEYYRQRNCN-LTQIGGLLDTKGYGIGMPVGSVFR 760
Query: 634 HDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNSFWXXXXXXXXXXXX 693
+ AIL + E ++++ ++ W++ CP A+ LG+ +
Sbjct: 761 DEFDLAILQLQENNRLEILKRKWWEG-GKCPKEEDH-RAKGLGMENIGGIFVVLICGLIV 818
Query: 694 XXXXXXXVFVHEHWNVLKNSES---SLLSRIRIFLR-IFVSRDLSAHTFKDKGGIQVHGM 749
F+ W L++SE+ S+ + LR I + +D S H + + G+
Sbjct: 819 AIFMAMLEFL---WT-LRHSEATEVSVCQEMVTELRSIILCQD-SVHPRRRRAGVPP--- 870
Query: 750 GPTEASPDSRYPASPSSYS 768
P P+ R P ++ S
Sbjct: 871 -PRPPVPEERRPRGTATLS 888
Score = 103 (41.3 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 47/197 (23%), Positives = 79/197 (40%)
Query: 78 QTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDSMQGVIGV 137
+T I+H S+ I KA E+G+++ +I T+ +L R S+ D ++G
Sbjct: 211 KTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRM--DSLVDDRVNILGF 268
Query: 138 RPYVPKTKALENFRVRWKRKFLQENPSL--FDAELNIFGLLAYDATSALAVAVEKAGITG 195
+ + F + + QEN F + L +DA A+ AV++ +
Sbjct: 269 SIFNQSHAFFQEFAQSLNQSW-QENCDHVPFTGPA-LSSALLFDAVYAVVTAVQELNRS- 325
Query: 196 FGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIIN 254
+ + I Q+G L+ L + GLTG F GQ + A +I+
Sbjct: 326 -----QEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQ 380
Query: 255 -VNNGARGVGFWSPEKG 270
NG R +G W G
Sbjct: 381 FTRNGFRQIGQWHVADG 397
>UNIPROTKB|G3N1N5 [details] [associations]
symbol:100335496 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:DAAA02039769 EMBL:DAAA02039770
Ensembl:ENSBTAT00000063398 Uniprot:G3N1N5
Length = 660
Score = 199 (75.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 72/255 (28%), Positives = 119/255 (46%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + VP Y D + +N ++ ++ G+ + + TI
Sbjct: 203 GYCVDLASEIAKHIGIKYKIAIVPDGKYGARDADTK-IWNGMVGELVYGKAEIAIAPLTI 261
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIGF-V 453
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG V
Sbjct: 262 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 318
Query: 454 VWVLEHRVN---------EDFR-GPAR---HQVG--TSFWFSFSTMVFSQRERVIS--NL 496
V L R + ED + GP+ ++ G S WFS F Q+ IS +L
Sbjct: 319 VLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGA--FMQQGCDISPRSL 376
Query: 497 A-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLG 555
+ R V VW F LI+I SYTA+L + LTV+++ I L K+ + + Y G+ G
Sbjct: 377 SGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE-IAY--GTLDSG 433
Query: 556 ILKQLGFDERKLVVY 570
K+ F K+ VY
Sbjct: 434 STKEF-FRRSKIAVY 447
Score = 143 (55.4 bits), Expect = 9.9e-07, Sum P(3) = 9.9e-07
Identities = 62/216 (28%), Positives = 97/216 (44%)
Query: 468 PARHQVGTSFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLT 524
P + S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LT
Sbjct: 348 PNEFGIFNSLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 405
Query: 525 VDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--L 579
V+++ I L K+ + + Y G+ G K+ F K+ VY ++ E +
Sbjct: 406 VERMVSPIESAEDLAKQTE-IAY--GTLDSGSTKEF-FRRSKIAVYEKMWTYMRSAEPSV 461
Query: 580 FQKGSANGGIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSP 631
F + +A G + +A LL I Q TM V + G+G A P S
Sbjct: 462 FTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSS 521
Query: 632 LVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
L + V+ A+L + E + ++++ W+ C G
Sbjct: 522 LRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGG 557
Score = 59 (25.8 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 24/116 (20%), Positives = 45/116 (38%)
Query: 153 RWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEA 212
RWK+ +E P + L YD +A + + + A
Sbjct: 36 RWKKLDQREYPGS-ETPPKYTSALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLANPA 94
Query: 213 FGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNN-GARGVGFWS 266
Q G + + L ++ +GLTG+ F G+ + ++ + + G R VG+W+
Sbjct: 95 APWGQ-GIDMERTLKQVQIQGLTGNVQFDHYGRRVNYTMDVFELKSTGPRKVGYWN 149
Score = 38 (18.4 bits), Expect = 9.9e-07, Sum P(3) = 9.9e-07
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 372 GSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTL--PY 409
G +ND+ V + + + DT + NR+ V + PY
Sbjct: 146 GYWNDMDKLVLIQDVPTLGNDTAAIENRTVVVTTIMESPY 185
>FB|FBgn0051201 [details] [associations]
symbol:GluRIIE "Glutamate receptor IIE" species:7227
"Drosophila melanogaster" [GO:0015277 "kainate selective glutamate
receptor activity" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IDA]
[GO:1900073 "regulation of neuromuscular synaptic transmission"
evidence=IC] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IC]
[GO:0008328 "ionotropic glutamate receptor complex" evidence=IPI]
[GO:0060025 "regulation of synaptic activity" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 EMBL:AE014297
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GeneTree:ENSGT00590000082809 KO:K05313 GO:GO:0005234 GO:GO:0004970
EMBL:BT056325 RefSeq:NP_001036733.1 UniGene:Dm.18739 SMR:Q0KI42
EnsemblMetazoa:FBtr0110837 GeneID:318623 KEGG:dme:Dmel_CG31201
UCSC:CG31201-RB CTD:318623 FlyBase:FBgn0051201 eggNOG:NOG304745
InParanoid:Q0KI42 OMA:GICATKE OrthoDB:EOG44XGXQ GenomeRNAi:318623
NextBio:845667 Uniprot:Q0KI42
Length = 897
Score = 196 (74.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 62/252 (24%), Positives = 115/252 (45%)
Query: 312 VGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS 371
+ VP K ++ V+ T + GY +D+ K + ++L + + FV G+ +
Sbjct: 426 LSVP-NKPYAQLVE-TYKQLEGNSQYEGYGVDLIKELADKLGFN--FTFVNGGNDYGSYN 481
Query: 372 GSYND---LIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR-N 427
S N+ ++ ++ G D + D TI R +DFT+P+ G++++ +K K
Sbjct: 482 KSTNESTGMLREIMTGRADLAITDLTITSEREQALDFTIPFMNLGIAILY-LKPQKATPE 540
Query: 428 AWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHRVNEDFRGP---------ARHQ--VGTS 476
+ F+ P + ++W G F+ + ++L ++ P +Q +G S
Sbjct: 541 LFTFMDPFSEEVWWFLGFSFLGVSLSFFILGRLSPSEWDNPYPCIEEPEELENQFTLGNS 600
Query: 477 FWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDV 535
WF+ ++ E L+ R V W F LI++ SYTA+L + LT+++ Q I V
Sbjct: 601 IWFTTGALLQQGSEIGPKALSTRTVASFWWFFTLIVVSSYTANLAAFLTIEKPQSLINSV 660
Query: 536 NLLIKRGDNVGY 547
+ L D V Y
Sbjct: 661 DDLADNKDGVVY 672
Score = 66 (28.3 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 51/267 (19%), Positives = 107/267 (40%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ ++I F W + +Y +Y ++ LT L T VI+ L D Q+
Sbjct: 148 ALYSLITEFNWTRFIFLYESAEY-LNILNELTTMLGKSGT------VITVLRYDMQLNGN 200
Query: 71 LYKLFTMQTRVFILHMLPSLGS-----RIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEP 125
YK + R + + + +GS +A ++G++N+ +I+ + + E
Sbjct: 201 -YKQVLRRVRKSVDNRIVVVGSSETMPEFLNQAQQVGIINEDYKYIIGNLDFHSFDLEEY 259
Query: 126 SVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALA 185
+++ + G+R + P+ A++ ++ Q+ + + L YDA A
Sbjct: 260 KYSEA--NITGLRLFSPEKMAVKELLMKLGYPTDQDEFRNGSCPITVEMALTYDAVQLFA 317
Query: 186 VAVEKAGITGFGFDKTNVSSNATDLEAFGIS-QNGPKLLQALSSIRFRGLTGDYIFVDGQ 244
++ N S + G S +N + L+ + LTG I+ +G
Sbjct: 318 QTLKNLPFKPM---PQNCSQRTESVRDDGSSFKNYMRTLRLTDRL----LTGP-IYFEGN 369
Query: 245 LQSSA-FEIINVN-NGARGVGFWSPEK 269
++ ++I + +G VG W ++
Sbjct: 370 VRKGYHLDVIELQPSGIVKVGTWDEDR 396
>FB|FBgn0028422 [details] [associations]
symbol:GluRIID "Glutamate receptor IID" species:7227
"Drosophila melanogaster" [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS;IPI] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA;IC;ISS] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISS]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0043179
"rhythmic excitation" evidence=IMP] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:1900073 "regulation of neuromuscular
synaptic transmission" evidence=IC] [GO:0045211 "postsynaptic
membrane" evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 EMBL:AE014297
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0007274 InterPro:IPR001828 GO:GO:0043179
GeneTree:ENSGT00590000082809 KO:K05313 GO:GO:0005234 OMA:IRFSENE
GO:GO:0015277 HSSP:P19491 EMBL:AY768536 EMBL:AY768537 EMBL:AJ251888
EMBL:AJ251889 RefSeq:NP_651982.1 UniGene:Dm.3353 SMR:Q9TVI0
STRING:Q9TVI0 EnsemblMetazoa:FBtr0083938 GeneID:44483
KEGG:dme:Dmel_CG18039 UCSC:CG18039-RA CTD:44483 FlyBase:FBgn0028422
InParanoid:Q9TVI0 OrthoDB:EOG4Z613H GenomeRNAi:44483 NextBio:837310
Uniprot:Q9TVI0
Length = 902
Score = 194 (73.4 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 58/248 (23%), Positives = 112/248 (45%)
Query: 318 KGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAY-----DFVPYAQPDGTSSG 372
K ++ V+ +ID GY +D+ K + ++L + + D+ + + ++SG
Sbjct: 429 KPYASLVE-SIDTLIGNNQFQGYGVDLIKELADKLGFNFTFRDGGNDYGSFNKTTNSTSG 487
Query: 373 SYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNA-WVF 431
+++ G D + D TI R +DF++P+ G++++ +K K A + F
Sbjct: 488 MLKEIVE----GRADLAITDLTITSEREEVIDFSIPFMNLGIAILY-VKPQKAPPALFSF 542
Query: 432 LQPLTWDLWVTSG--------CFFIF--IGFVVWVLEHR-VNEDFRGPARHQVGTSFWFS 480
+ P + ++W+ G CFFI + + W + + E + + S WF+
Sbjct: 543 MDPFSSEVWLYLGIAYLGVSLCFFIIGRLSPIEWDNPYPCIEEPEELENQFTINNSLWFT 602
Query: 481 FSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLI 539
++ E L+ R + +W F LI++ SYTA+L + LT++ I V L
Sbjct: 603 TGALLQQGSEIAPKALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKDLA 662
Query: 540 KRGDNVGY 547
D+V Y
Sbjct: 663 DNKDDVQY 670
Score = 126 (49.4 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 61/253 (24%), Positives = 104/253 (41%)
Query: 422 DSKKRNAWVFLQPLTWDLWVTSGCFFIF--IGFVVWVLEHR-VNEDFRGPARHQVGTSFW 478
D W++L + + L V S CFFI + + W + + E + + S W
Sbjct: 544 DPFSSEVWLYLG-IAY-LGV-SLCFFIIGRLSPIEWDNPYPCIEEPEELENQFTINNSLW 600
Query: 479 FSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNL 537
F+ ++ E L+ R + +W F LI++ SYTA+L + LT++ I V
Sbjct: 601 FTTGALLQQGSEIAPKALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKD 660
Query: 538 LIKRGDNVGYQKGSFVLGILKQLGFDERKLVVY-------NSHEEC-DELFQKG--SANG 587
L D+V Y G+ G + F + +Y N+H E E Q+G
Sbjct: 661 LADNKDDVQY--GAKRTGSTRNF-FSTSEEPIYIKMNEYLNAHPEMLMENNQQGVDKVKS 717
Query: 588 GIAAAF-DEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEG 646
G AF E + + C+ T V G+G A + P +KA+L + E
Sbjct: 718 GTKYAFLMESTSIEFNTVRECN-LTKVGDPLDEKGYGIAMVKNWPYRDKFNKALLELQEQ 776
Query: 647 DKMKEIEDAWFKK 659
+ +++ W+ +
Sbjct: 777 GVLARLKNKWWNE 789
Score = 68 (29.0 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 36/182 (19%), Positives = 79/182 (43%)
Query: 92 SRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE-PSVTDSMQGVIGVRPYVPKTKALENF 150
+ + +A ++G+MN+ +I+ G NL T + S + G+R + P + + +
Sbjct: 223 AELLRQAQQVGIMNEDYTYII--GNLNL-HTFDLEEYKYSEANITGIRMFSPDQEEVRDL 279
Query: 151 RVRWKRKFLQENP-SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNATD 209
+ ++ + P + + + L YDA +A E + N S +
Sbjct: 280 MEKLHQELGESEPVNSGSTFITMEMALTYDAVRVIA---ETTKHLPYQPQMLNCSERHDN 336
Query: 210 LEAFGISQNGPKLLQALSSIRFRGLTGDYIFVDGQLQSS-AFEIINVN-NGARGVGFWSP 267
++ G + +++L I+ + +TG I+ +G ++ F++I + +G VG W
Sbjct: 337 VQPDGSTFRN--YMRSLE-IKEKTITGR-IYFEGNVRKGFTFDVIELQTSGLVKVGTWEE 392
Query: 268 EK 269
K
Sbjct: 393 GK 394
>UNIPROTKB|F1N246 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0048266
GO:GO:0035235 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 EMBL:DAAA02000152 EMBL:DAAA02000153
EMBL:DAAA02000154 EMBL:DAAA02000155 EMBL:DAAA02000156
EMBL:DAAA02000157 IPI:IPI00707470 Ensembl:ENSBTAT00000026819
OMA:ICALICL Uniprot:F1N246
Length = 869
Score = 186 (70.5 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 56/216 (25%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + V + + G +N ++ ++ + D V TI +
Sbjct: 424 GYCLDLLKELSNILGFIYDVKLVADGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITY 483
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 484 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 543
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 544 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 603
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 604 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 639
Score = 135 (52.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 58/255 (22%), Positives = 107/255 (41%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 521 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 579
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 580 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 639
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 640 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVK--NSDEGIHRVLTT-DY 695
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ P + ++ A++N+ + +
Sbjct: 696 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIADPFMRKLTLAMINLQQEKSLHF 755
Query: 652 IEDAWFKKHSSCPDA 666
++ W + H D+
Sbjct: 756 NQEYWIRGHGRPKDS 770
Score = 74 (31.1 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 32/126 (25%), Positives = 50/126 (39%)
Query: 153 RWKRKFLQENP----SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNAT 208
+W + LQ P L D + L YDA +A+A +A + VSS
Sbjct: 257 KWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRAS-------QLTVSS--L 307
Query: 209 DLEAFGISQNGPKLLQALSSIRF-RGLTGDYIF--VDGQLQSSAFEIINVNN-GARGVGF 264
+ GP+ + + R+ GLTG F DG + +II++ G +G
Sbjct: 308 QCHRHKPWRLGPRFMNLIKEARWWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGI 367
Query: 265 WSPEKG 270
W+ G
Sbjct: 368 WNSNSG 373
Score = 38 (18.4 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 96 EKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDSMQGVIGV--RPYVPKTKA 146
E +IG+ N MTDG + + S+ + V + PYV K+
Sbjct: 360 EGTEKIGIWNSNSGLNMTDGNKDRSNNITDSLANRTLIVTTILEEPYVMYRKS 412
>UNIPROTKB|F1SQ84 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050966 "detection of mechanical
stimulus involved in sensory perception of pain" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001964 "startle response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0048167 GO:GO:0014069
GO:GO:0007423 GO:GO:0045471 GO:GO:0007613 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0007612 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0001701 GO:GO:0035235
GO:GO:0001967 GO:GO:0060079 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0001964 GO:GO:0017146 GO:GO:0005234
GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 OMA:CTNRSHL EMBL:CU463198
EMBL:CU694276 Ensembl:ENSSSCT00000000660 Uniprot:F1SQ84
Length = 1351
Score = 190 (71.9 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 59/237 (24%), Positives = 110/237 (46%)
Query: 304 PTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPY 363
P + +R VP +K K +P + G+ ID+ K + + + + V
Sbjct: 291 PLSGTCMRNTVPCQKRIVSENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTN 350
Query: 364 AQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDS 423
+ +G++N +I +V + VG TI RS VDF++P+ E+G+S++V + +
Sbjct: 351 GKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVS-RSN 409
Query: 424 KKRNAWVFLQPLTWDLWVTSGCFFIFIGFV-VWVLEH-------RVNEDFRGPA--RHQV 473
+ FL+P + D+WV + + V V+V E+ R D R P +
Sbjct: 410 GTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTI 469
Query: 474 GTSFWFSFSTMVFSQRERVIS---NLARFVVIVWCFVVLILIQSYTASLTSLLTVDQ 527
G + W + +VF+ V + ++ +V VW F +I + SYTA+L + + ++
Sbjct: 470 GKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE 525
Score = 74 (31.1 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
D +I+ +L KL Q+ + +L+ + IFE AN +GL G WI+
Sbjct: 80 DSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIV 125
>MGI|MGI:95817 [details] [associations]
symbol:Grik4 "glutamate receptor, ionotropic, kainate 4"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043204 "perikaryon" evidence=ISO] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95817
GO:GO:0005634 GO:GO:0030054 GO:GO:0045211 GO:GO:0030425
GO:GO:0043204 GO:GO:0035235 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 EMBL:AC160123 GO:GO:0031960 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0032983 CTD:2900
KO:K05204 OMA:NRAPERL EMBL:AK032029 EMBL:AC122449 EMBL:AC136903
EMBL:AC140387 IPI:IPI00273856 RefSeq:NP_780690.2 UniGene:Mm.370291
ProteinModelPortal:Q8BMF5 SMR:Q8BMF5 STRING:Q8BMF5
PhosphoSite:Q8BMF5 PRIDE:Q8BMF5 Ensembl:ENSMUST00000034515
Ensembl:ENSMUST00000114865 GeneID:110637 KEGG:mmu:110637
InParanoid:Q8BMF5 OrthoDB:EOG402WRF NextBio:364375 Bgee:Q8BMF5
CleanEx:MM_GRIK4 Genevestigator:Q8BMF5
GermOnline:ENSMUSG00000032017 Uniprot:Q8BMF5
Length = 956
Score = 160 (61.4 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 50/216 (23%), Positives = 99/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
G+ +D+ K + E L + V Y P+ ++G++ ++ ++ + D V TI
Sbjct: 446 GFCVDMLKELAEILRFNYKIRLVGDGVYGVPE--ANGTWTGMVGELIARKADLAVAGLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVW 455
R +DF+ P+ G+S++ + ++ + FL P + +W+ ++ + V++
Sbjct: 504 TAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLF 563
Query: 456 VLEHRVNEDFRGPA------------RHQVGTSFWFSFSTMVFSQRERVISNLA---RFV 500
++ ++ P ++ +G S WF F Q+ I+ A R V
Sbjct: 564 LVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGG--FMQQGSTIAPRALSTRCV 621
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
VW LI+I SYTA+L + LTV +++ I V+
Sbjct: 622 SGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVD 657
Score = 129 (50.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 58/226 (25%), Positives = 97/226 (42%)
Query: 470 RHQVGTSFWFSFSTMVFSQRERVISNLA---RFVVIVWCFVVLILIQSYTASLTSLLTVD 526
++ +G S WF F Q+ I+ A R V VW LI+I SYTA+L + LTV
Sbjct: 590 QYSLGNSLWFPVGG--FMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQ 647
Query: 527 QLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNS-----HEECDELFQ 581
+++ I V+ L D + G+ + G F + Y + + +F
Sbjct: 648 RMEVPIESVDDL---ADQTAIEYGT-IHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVFV 703
Query: 582 KGSANGGIAAAFDEIPYAKLLIG--------QHCSKYTMVEPTFKTAGFGFAFPLHSPLV 633
K S GIA + YA LL ++C+ T + T G+G P+ S
Sbjct: 704 K-STEEGIARVLNS-NYAFLLESTMNEYYRQRNCN-LTQIGGLLDTKGYGIGMPVGSVFR 760
Query: 634 HDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ AIL + E ++++ ++ W++ CP A+ LG+ +
Sbjct: 761 DEFDLAILQLQENNRLEILKRKWWEG-GKCPKEEDH-RAKGLGMEN 804
Score = 101 (40.6 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 46/197 (23%), Positives = 80/197 (40%)
Query: 78 QTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDSMQGVIGV 137
+T I+H S+ I KA E+G+++ +I T+ +L R S+ D ++G
Sbjct: 211 KTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRM--DSLVDDRVNILGF 268
Query: 138 RPYVPKTKALENFRVRWKRKFLQENPSL--FDAELNIFGLLAYDATSALAVAVEKAGITG 195
+ + F + + QEN F + L +DA A+ AV++ +
Sbjct: 269 SIFNQSHAFFQEFSQSLNQSW-QENCDHVPFTGPA-LSSALLFDAVYAVVTAVQELNRS- 325
Query: 196 FGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIIN 254
+ + I Q+G L+ L + GLTG F GQ + A +I+
Sbjct: 326 -----QEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQ 380
Query: 255 -VNNGARGVGFWSPEKG 270
NG + +G W +G
Sbjct: 381 FTRNGFQQIGQWHVAEG 397
>MGI|MGI:95821 [details] [associations]
symbol:Grin2b "glutamate receptor, ionotropic, NMDA2B (epsilon
2)" species:10090 "Mus musculus" [GO:0001508 "regulation of action
potential" evidence=ISO] [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0001964 "startle response" evidence=IGI;IMP]
[GO:0001967 "suckling behavior" evidence=IMP] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISO] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IGI;IMP] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005149 "interleukin-1
receptor binding" evidence=ISO] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005261 "cation channel activity" evidence=IGI]
[GO:0005262 "calcium channel activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006812 "cation transport"
evidence=IGI] [GO:0006816 "calcium ion transport" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007423
"sensory organ development" evidence=IMP] [GO:0007611 "learning or
memory" evidence=TAS] [GO:0007612 "learning" evidence=IMP;IDA]
[GO:0007613 "memory" evidence=ISO;IMP;IDA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008021 "synaptic vesicle"
evidence=IDA] [GO:0008144 "drug binding" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008306 "associative learning"
evidence=ISO] [GO:0009790 "embryo development" evidence=IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0014049 "positive
regulation of glutamate secretion" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=ISO;IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=ISO] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO;IPI] [GO:0030018 "Z disc" evidence=ISO] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0031749 "D2 dopamine receptor
binding" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IGI;IMP] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IGI;IMP] [GO:0035255 "ionotropic
glutamate receptor binding" evidence=ISO] [GO:0042165
"neurotransmitter binding" evidence=ISO] [GO:0042596 "fear
response" evidence=IMP] [GO:0042734 "presynaptic membrane"
evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043083 "synaptic cleft" evidence=ISO] [GO:0043113 "receptor
clustering" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043408 "regulation of MAPK cascade" evidence=ISO] [GO:0045202
"synapse" evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane"
evidence=IDA] [GO:0045471 "response to ethanol" evidence=ISO;IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048167 "regulation
of synaptic plasticity" evidence=IMP] [GO:0048168 "regulation of
neuronal synaptic plasticity" evidence=TAS] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=ISO]
[GO:0048266 "behavioral response to pain" evidence=IMP] [GO:0048511
"rhythmic process" evidence=ISO] [GO:0050806 "positive regulation
of synaptic transmission" evidence=ISO] [GO:0050839 "cell adhesion
molecule binding" evidence=ISO] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IMP] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=IMP] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IGI;IMP] [GO:0070588
"calcium ion transmembrane transport" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95821
GO:GO:0014069 GO:GO:0009986 GO:GO:0007423 GO:GO:0045471
GO:GO:0046872 GO:GO:0007613 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0007612 GO:GO:0008021 GO:GO:0048266
GO:GO:0050966 GO:GO:0008270 GO:GO:0001701 GO:GO:0001967
GO:GO:0060079 GO:GO:0042734 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0048168 GO:GO:0001964 GO:GO:0017146
GO:GO:0005234 eggNOG:NOG282132 GO:GO:0004972 HOVERGEN:HBG052635
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 CTD:2904
KO:K05210 OrthoDB:EOG4Z8XVM EMBL:D10651 EMBL:AK002963
IPI:IPI00321320 PIR:I49704 RefSeq:NP_032197.3 UniGene:Mm.436649
ProteinModelPortal:Q01097 SMR:Q01097 DIP:DIP-31568N IntAct:Q01097
MINT:MINT-135847 STRING:Q01097 PhosphoSite:Q01097 PaxDb:Q01097
PRIDE:Q01097 GeneID:14812 KEGG:mmu:14812 UCSC:uc009elq.1
InParanoid:Q01097 BindingDB:Q01097 ChEMBL:CHEMBL3442 NextBio:287003
Genevestigator:Q01097 GermOnline:ENSMUSG00000030209 Uniprot:Q01097
Length = 1482
Score = 190 (71.9 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 59/237 (24%), Positives = 110/237 (46%)
Query: 304 PTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPY 363
P + +R VP +K K +P + G+ ID+ K + + + + V
Sbjct: 424 PLSGTCMRNTVPCQKRIISENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTN 483
Query: 364 AQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDS 423
+ +G++N +I +V + VG TI RS VDF++P+ E+G+S++V + +
Sbjct: 484 GKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVS-RSN 542
Query: 424 KKRNAWVFLQPLTWDLWVTSGCFFIFIGFV-VWVLEH-------RVNEDFRGPA--RHQV 473
+ FL+P + D+WV + + V V+V E+ R D R P +
Sbjct: 543 GTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTI 602
Query: 474 GTSFWFSFSTMVFSQRERVIS---NLARFVVIVWCFVVLILIQSYTASLTSLLTVDQ 527
G + W + +VF+ V + ++ +V VW F +I + SYTA+L + + ++
Sbjct: 603 GKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE 658
Score = 74 (31.1 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
D +I+ +L KL Q+ + +L+ + IFE AN +GL G WI+
Sbjct: 213 DSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIV 258
Score = 39 (18.8 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 16/76 (21%), Positives = 31/76 (40%)
Query: 2 ALNDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVI--S 59
A+N++ IT I R+ + + + +E I + D + A T P + S
Sbjct: 72 AMNETDPKSIITRICDLMSDRKIQGVVLADDTDQEAIAQILDFISA-QTLTPILGIHGGS 130
Query: 60 PLATDDQIEKELYKLF 75
+ D+ E ++ F
Sbjct: 131 SMIMADKDESSMFFQF 146
>RGD|2738 [details] [associations]
symbol:Grin2b "glutamate receptor, ionotropic, N-methyl D-aspartate
2B" species:10116 "Rattus norvegicus" [GO:0001101 "response to acid"
evidence=IEP] [GO:0001508 "regulation of action potential"
evidence=IMP] [GO:0001662 "behavioral fear response"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=IEA;ISO] [GO:0001964 "startle response" evidence=IEA;ISO]
[GO:0001967 "suckling behavior" evidence=IEA;ISO] [GO:0001975
"response to amphetamine" evidence=IEP] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA;ISO;IDA] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005149 "interleukin-1 receptor binding" evidence=IPI]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA;IDA] [GO:0005261 "cation channel activity" evidence=ISO]
[GO:0005262 "calcium channel activity" evidence=IEA;ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0006812 "cation transport"
evidence=ISO] [GO:0006816 "calcium ion transport" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=ISO] [GO:0007423
"sensory organ development" evidence=IEA;ISO] [GO:0007611 "learning
or memory" evidence=TAS] [GO:0007612 "learning" evidence=IEA;ISO]
[GO:0007613 "memory" evidence=IEA;ISO;IDA] [GO:0007616 "long-term
memory" evidence=IEP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008021 "synaptic vesicle" evidence=IEA;ISO]
[GO:0008144 "drug binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0008306 "associative learning"
evidence=IMP] [GO:0009612 "response to mechanical stimulus"
evidence=IEP] [GO:0009743 "response to carbohydrate stimulus"
evidence=IEP] [GO:0009790 "embryo development" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010042 "response to
manganese ion" evidence=IEP] [GO:0010350 "cellular response to
magnesium starvation" evidence=IEP] [GO:0010942 "positive regulation
of cell death" evidence=IMP;IDA] [GO:0014049 "positive regulation of
glutamate secretion" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=IEA;ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0014075 "response to amine stimulus"
evidence=IEP] [GO:0016020 "membrane" evidence=ISO] [GO:0016594
"glycine binding" evidence=IEA;ISO] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=IEA;ISO;IDA]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0021987
"cerebral cortex development" evidence=IEP] [GO:0030018 "Z disc"
evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA] [GO:0031749
"D2 dopamine receptor binding" evidence=IPI] [GO:0032026 "response to
magnesium ion" evidence=IEP] [GO:0033555 "multicellular organismal
response to stress" evidence=IEP] [GO:0034097 "response to cytokine
stimulus" evidence=IEP] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0035255 "ionotropic glutamate receptor
binding" evidence=IPI] [GO:0042165 "neurotransmitter binding"
evidence=IDA] [GO:0042220 "response to cocaine" evidence=IEP]
[GO:0042596 "fear response" evidence=ISO] [GO:0042734 "presynaptic
membrane" evidence=ISO;IDA] [GO:0043005 "neuron projection"
evidence=ISO;IDA] [GO:0043083 "synaptic cleft" evidence=IDA]
[GO:0043113 "receptor clustering" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043408 "regulation of MAPK cascade" evidence=IMP] [GO:0045202
"synapse" evidence=ISO;IDA;TAS] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0045471 "response to ethanol"
evidence=IEA;IEP;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0048167 "regulation of synaptic
plasticity" evidence=IEA;ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048266 "behavioral
response to pain" evidence=IEA;ISO] [GO:0048511 "rhythmic process"
evidence=IDA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0050839 "cell adhesion molecule
binding" evidence=IPI] [GO:0050966 "detection of mechanical stimulus
involved in sensory perception of pain" evidence=IEA;ISO] [GO:0051592
"response to calcium ion" evidence=IEP] [GO:0051597 "response to
methylmercury" evidence=IEP] [GO:0051602 "response to electrical
stimulus" evidence=IEP] [GO:0051707 "response to other organism"
evidence=IEP] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=ISO] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA;ISO] [GO:0060416
"response to growth hormone stimulus" evidence=IEP] [GO:0060992
"response to fungicide" evidence=IEP] [GO:0070588 "calcium ion
transmembrane transport" evidence=ISO] [GO:0071230 "cellular response
to amino acid stimulus" evidence=IEP] [GO:0071287 "cellular response
to manganese ion" evidence=IEP] [GO:0071359 "cellular response to
dsRNA" evidence=IEP] [GO:0071363 "cellular response to growth factor
stimulus" evidence=IEP] [GO:0071396 "cellular response to lipid"
evidence=IEP] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2738
GO:GO:0021987 GO:GO:0021766 GO:GO:0014069 GO:GO:0009612 GO:GO:0030018
GO:GO:0071363 GO:GO:0007423 GO:GO:0051592 GO:GO:0045471 GO:GO:0060992
GO:GO:0046872 GO:GO:0008144 GO:GO:0042220 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0048266 GO:GO:0050966 GO:GO:0051602
GO:GO:0008270 GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0007616
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0001975 GO:GO:0014049
GO:GO:0048511 GO:GO:0030288 GO:GO:0051707 GO:GO:0043083 GO:GO:0010942
GO:GO:0001508 GO:GO:0008306 GO:GO:0043113 GO:GO:0033555 GO:GO:0046982
GO:GO:0009743 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0051597 GO:GO:0060416 GO:GO:0071230 GO:GO:0071396 GO:GO:0001964
GO:GO:0050806 GO:GO:0032026 GO:GO:0010350 GO:GO:0071287 GO:GO:0017146
GO:GO:0042165 GO:GO:0043408 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GO:GO:0071359 GO:GO:0004972 HOVERGEN:HBG052635
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 TCDB:1.A.10.1.6
CTD:2904 KO:K05210 OrthoDB:EOG4Z8XVM EMBL:M91562 EMBL:U11419
IPI:IPI00326061 PIR:B43274 RefSeq:NP_036706.1 UniGene:Rn.9711
PDB:3JPW PDB:3JPY PDB:3QEL PDB:3QEM PDBsum:3JPW PDBsum:3JPY
PDBsum:3QEL PDBsum:3QEM ProteinModelPortal:Q00960 SMR:Q00960
DIP:DIP-33702N IntAct:Q00960 MINT:MINT-104014 STRING:Q00960
PhosphoSite:Q00960 PRIDE:Q00960 GeneID:24410 KEGG:rno:24410
UCSC:RGD:2738 InParanoid:Q00960 BindingDB:Q00960 ChEMBL:CHEMBL311
EvolutionaryTrace:Q00960 NextBio:603231 Genevestigator:Q00960
GermOnline:ENSRNOG00000008766 Uniprot:Q00960
Length = 1482
Score = 190 (71.9 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 59/237 (24%), Positives = 110/237 (46%)
Query: 304 PTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPY 363
P + +R VP +K K +P + G+ ID+ K + + + + V
Sbjct: 424 PLSGTCMRNTVPCQKRIISENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTN 483
Query: 364 AQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDS 423
+ +G++N +I +V + VG TI RS VDF++P+ E+G+S++V + +
Sbjct: 484 GKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVS-RSN 542
Query: 424 KKRNAWVFLQPLTWDLWVTSGCFFIFIGFV-VWVLEH-------RVNEDFRGPA--RHQV 473
+ FL+P + D+WV + + V V+V E+ R D R P +
Sbjct: 543 GTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTI 602
Query: 474 GTSFWFSFSTMVFSQRERVIS---NLARFVVIVWCFVVLILIQSYTASLTSLLTVDQ 527
G + W + +VF+ V + ++ +V VW F +I + SYTA+L + + ++
Sbjct: 603 GKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE 658
Score = 74 (31.1 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
D +I+ +L KL Q+ + +L+ + IFE AN +GL G WI+
Sbjct: 213 DSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIV 258
Score = 37 (18.1 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 16/76 (21%), Positives = 30/76 (39%)
Query: 2 ALNDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVI--S 59
A+N++ IT I R+ + + +E I + D + A T P + S
Sbjct: 72 AMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDFISA-QTLTPILGIHGGS 130
Query: 60 PLATDDQIEKELYKLF 75
+ D+ E ++ F
Sbjct: 131 SMIMADKDESSMFFQF 146
>UNIPROTKB|Q00960 [details] [associations]
symbol:Grin2b "Glutamate receptor ionotropic, NMDA 2B"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2738 GO:GO:0021987
GO:GO:0021766 GO:GO:0014069 GO:GO:0009612 GO:GO:0030018
GO:GO:0071363 GO:GO:0007423 GO:GO:0051592 GO:GO:0045471
GO:GO:0060992 GO:GO:0046872 GO:GO:0008144 GO:GO:0042220
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0051602 GO:GO:0008270
GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0007616
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0001975
GO:GO:0014049 GO:GO:0048511 GO:GO:0030288 GO:GO:0051707
GO:GO:0043083 GO:GO:0010942 GO:GO:0001508 GO:GO:0008306
GO:GO:0043113 GO:GO:0033555 GO:GO:0046982 GO:GO:0009743
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0051597
GO:GO:0060416 GO:GO:0071230 GO:GO:0071396 GO:GO:0001964
GO:GO:0050806 GO:GO:0032026 GO:GO:0010350 GO:GO:0071287
GO:GO:0017146 GO:GO:0042165 GO:GO:0043408 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GO:GO:0071359 GO:GO:0004972
HOVERGEN:HBG052635 InterPro:IPR018884 Pfam:PF10565
HOGENOM:HOG000113802 TCDB:1.A.10.1.6 CTD:2904 KO:K05210
OrthoDB:EOG4Z8XVM EMBL:M91562 EMBL:U11419 IPI:IPI00326061
PIR:B43274 RefSeq:NP_036706.1 UniGene:Rn.9711 PDB:3JPW PDB:3JPY
PDB:3QEL PDB:3QEM PDBsum:3JPW PDBsum:3JPY PDBsum:3QEL PDBsum:3QEM
ProteinModelPortal:Q00960 SMR:Q00960 DIP:DIP-33702N IntAct:Q00960
MINT:MINT-104014 STRING:Q00960 PhosphoSite:Q00960 PRIDE:Q00960
GeneID:24410 KEGG:rno:24410 UCSC:RGD:2738 InParanoid:Q00960
BindingDB:Q00960 ChEMBL:CHEMBL311 EvolutionaryTrace:Q00960
NextBio:603231 Genevestigator:Q00960 GermOnline:ENSRNOG00000008766
Uniprot:Q00960
Length = 1482
Score = 190 (71.9 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 59/237 (24%), Positives = 110/237 (46%)
Query: 304 PTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPY 363
P + +R VP +K K +P + G+ ID+ K + + + + V
Sbjct: 424 PLSGTCMRNTVPCQKRIISENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTN 483
Query: 364 AQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDS 423
+ +G++N +I +V + VG TI RS VDF++P+ E+G+S++V + +
Sbjct: 484 GKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVS-RSN 542
Query: 424 KKRNAWVFLQPLTWDLWVTSGCFFIFIGFV-VWVLEH-------RVNEDFRGPA--RHQV 473
+ FL+P + D+WV + + V V+V E+ R D R P +
Sbjct: 543 GTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTI 602
Query: 474 GTSFWFSFSTMVFSQRERVIS---NLARFVVIVWCFVVLILIQSYTASLTSLLTVDQ 527
G + W + +VF+ V + ++ +V VW F +I + SYTA+L + + ++
Sbjct: 603 GKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE 658
Score = 74 (31.1 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
D +I+ +L KL Q+ + +L+ + IFE AN +GL G WI+
Sbjct: 213 DSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIV 258
Score = 37 (18.1 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 16/76 (21%), Positives = 30/76 (39%)
Query: 2 ALNDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVI--S 59
A+N++ IT I R+ + + +E I + D + A T P + S
Sbjct: 72 AMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDFISA-QTLTPILGIHGGS 130
Query: 60 PLATDDQIEKELYKLF 75
+ D+ E ++ F
Sbjct: 131 SMIMADKDESSMFFQF 146
>UNIPROTKB|F1MCL3 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050966 "detection of mechanical
stimulus involved in sensory perception of pain" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001964 "startle response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0048167 GO:GO:0014069
GO:GO:0007423 GO:GO:0045471 GO:GO:0007613 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0007612 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0001701 GO:GO:0035235
GO:GO:0001967 GO:GO:0060079 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0001964 GO:GO:0017146 GO:GO:0005234
GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 CTD:2904 KO:K05210 OMA:CTNRSHL
EMBL:DAAA02014263 EMBL:DAAA02014253 EMBL:DAAA02014254
EMBL:DAAA02014255 EMBL:DAAA02014256 EMBL:DAAA02014257
EMBL:DAAA02014258 EMBL:DAAA02014259 EMBL:DAAA02014260
EMBL:DAAA02014261 EMBL:DAAA02014262 IPI:IPI00717585
RefSeq:NP_001179850.1 UniGene:Bt.61353 ProteinModelPortal:F1MCL3
Ensembl:ENSBTAT00000000263 GeneID:537804 KEGG:bta:537804
NextBio:20877218 Uniprot:F1MCL3
Length = 1497
Score = 190 (71.9 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 59/237 (24%), Positives = 110/237 (46%)
Query: 304 PTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPY 363
P + +R VP +K K +P + G+ ID+ K + + + + V
Sbjct: 424 PLSGTCMRNTVPCQKRIISENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTN 483
Query: 364 AQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDS 423
+ +G++N +I +V + VG TI RS VDF++P+ E+G+S++V + +
Sbjct: 484 GKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVS-RSN 542
Query: 424 KKRNAWVFLQPLTWDLWVTSGCFFIFIGFV-VWVLEH-------RVNEDFRGPA--RHQV 473
+ FL+P + D+WV + + V V+V E+ R D R P +
Sbjct: 543 GTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTI 602
Query: 474 GTSFWFSFSTMVFSQRERVIS---NLARFVVIVWCFVVLILIQSYTASLTSLLTVDQ 527
G + W + +VF+ V + ++ +V VW F +I + SYTA+L + + ++
Sbjct: 603 GKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE 658
Score = 74 (31.1 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
D +I+ +L KL Q+ + +L+ + IFE AN +GL G WI+
Sbjct: 213 DSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIV 258
Score = 37 (18.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 16/76 (21%), Positives = 30/76 (39%)
Query: 2 ALNDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVI--S 59
A+N++ IT I R+ + + +E I + D + A T P + S
Sbjct: 72 AMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDFISA-QTLTPILGIHGGS 130
Query: 60 PLATDDQIEKELYKLF 75
+ D+ E ++ F
Sbjct: 131 SMIMADKDESSMFFQF 146
>UNIPROTKB|F1NMB0 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001964 "startle
response" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0005262 "calcium channel activity" evidence=IEA]
[GO:0007423 "sensory organ development" evidence=IEA] [GO:0007612
"learning" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0048266
"behavioral response to pain" evidence=IEA] [GO:0050966 "detection
of mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=ISS] [GO:0045202 "synapse" evidence=ISS]
[GO:0043005 "neuron projection" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=ISS] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=ISS] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=ISS] [GO:0007613 "memory" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0043408 "regulation of MAPK cascade"
evidence=ISS] [GO:0008021 "synaptic vesicle" evidence=ISS]
[GO:0014049 "positive regulation of glutamate secretion"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0048167 GO:GO:0014069 GO:GO:0045471 GO:GO:0007613
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0043005 GO:GO:0042734 GO:GO:0014049 GO:GO:0030288
GO:GO:0046982 InterPro:IPR001828 GO:GO:0017146 GO:GO:0043408
GO:GO:0005234 GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 OMA:CTNRSHL
EMBL:AADN02006024 EMBL:AADN02006025 EMBL:AADN02006026
EMBL:AADN02006027 IPI:IPI00599161 ProteinModelPortal:F1NMB0
Ensembl:ENSGALT00000019272 Uniprot:F1NMB0
Length = 1370
Score = 191 (72.3 bits), Expect = 7.6e-13, Sum P(3) = 7.6e-13
Identities = 60/237 (25%), Positives = 109/237 (45%)
Query: 304 PTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPY 363
P + +R VP +K K +P + G+ ID+ K + + + + V
Sbjct: 288 PLSGTCMRNTVPCQKRIVTENKTDEEPDYMKKCCKGFCIDILKKISKSVKFTYDLYLVTN 347
Query: 364 AQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDS 423
+ +G++N +I +V VG TI RS VDF++P+ E+G+S++V + +
Sbjct: 348 GKHGKKINGTWNGMIGEVVTKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVS-RSN 406
Query: 424 KKRNAWVFLQPLTWDLWVTSGCFFIFIGFV-VWVLEH-------RVNEDFRGPA--RHQV 473
+ FL+P + D+WV + I V V+V E+ R D R P +
Sbjct: 407 GTVSPSAFLEPFSADVWVMMFVMLLIISAVAVFVFEYFSPVGYNRCLADGREPGGPSFTI 466
Query: 474 GTSFWFSFSTMVFSQRERVIS---NLARFVVIVWCFVVLILIQSYTASLTSLLTVDQ 527
G + W + +VF+ V + ++ +V VW F +I + SYTA+L + + ++
Sbjct: 467 GKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE 522
Score = 75 (31.5 bits), Expect = 7.6e-13, Sum P(3) = 7.6e-13
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
D +I+ +L KL Q+ V +L+ + IFE AN +GL G WI+
Sbjct: 75 DSKIQNQLKKL---QSPVILLYCTKEEATYIFEVANSVGLTGYGYTWIV 120
Score = 44 (20.5 bits), Expect = 7.6e-13, Sum P(3) = 7.6e-13
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 752 TEASPDSRYPASPSS 766
T A+ S+YP SPS+
Sbjct: 1154 TSATSSSKYPQSPSN 1168
>UNIPROTKB|I3L7T2 [details] [associations]
symbol:LOC100623470 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0097110 "scaffold protein binding" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IEA]
[GO:0043197 "dendritic spine" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0034613 "cellular
protein localization" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00918 GO:GO:0034613 GO:GO:0043197
GO:GO:0035235 GO:GO:0045202 GO:GO:0060079 GO:GO:0060134
GO:GO:0035249 GO:GO:0043523 GO:GO:0008328 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113
Ensembl:ENSSSCT00000031108 OMA:INDANCA Uniprot:I3L7T2
Length = 229
Score = 181 (68.8 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 59/222 (26%), Positives = 101/222 (45%)
Query: 323 FVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIY 379
FV V+ + + G+SIDV A+ L + P Y P G++N L+
Sbjct: 16 FVMVSENVLGKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQ--EDGTWNGLVG 73
Query: 380 QVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDL 439
++ D + TI +R N VDFT Y + V +++ + K + + L P L
Sbjct: 74 ELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLLR-RAEKTVDMFACLAPFDLSL 132
Query: 440 WVTSGCFFIFIGFVVWVLEHRVNEDFRGPARHQVGT--------SFWFSFSTMVFSQRER 491
W + +G +V++L ++ P R Q+G+ S WF + + V E
Sbjct: 133 WACIAGTVLLVGLLVYLL------NWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEV 186
Query: 492 VISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
+ LA R ++ W LI+I SYTA+L + LT+ +++ +I
Sbjct: 187 PYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSI 228
>UNIPROTKB|F1M526 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00951061
ProteinModelPortal:F1M526 Ensembl:ENSRNOT00000067570
ArrayExpress:F1M526 Uniprot:F1M526
Length = 832
Score = 193 (73.0 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 438 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 497
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 498 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 557
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 558 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 617
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 618 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 653
Score = 153 (58.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 535 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 593
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 594 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 653
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 654 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVK--NSDEGIQRVLTT-DY 709
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 710 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 769
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ + A +LG+ +
Sbjct: 770 MKEKWWRGNG-CPEEDSK-EASALGVEN 795
Score = 64 (27.6 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 51/252 (20%), Positives = 93/252 (36%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ ++ + W+ +Y D+ G + L A + ++ R + P A D K
Sbjct: 121 AVLDLVLYYNWKTVTVVYEDST-GLIRLQELIKAPSRYNIKIKIRQL--PPANKDA--KP 175
Query: 71 LYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTD 129
L K +++ + I ++ +G+M + + T + LE
Sbjct: 176 LLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT-LDLFALDLE-LYRY 233
Query: 130 SMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSALA 185
S + G R + + +W + LQ P L D + L YDA +A
Sbjct: 234 SGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 293
Query: 186 VAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VDG 243
+A +A + VSS + GP+ + + R+ GLTG F DG
Sbjct: 294 IASHRAS-------QLTVSS--LQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDG 344
Query: 244 QLQSSAFEIINV 255
+ +II++
Sbjct: 345 LRKDFDLDIISL 356
>UNIPROTKB|Q13224 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0007612 "learning" evidence=IEA] [GO:0007613 "memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0048266
"behavioral response to pain" evidence=IEA] [GO:0050966 "detection
of mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IDA] [GO:0045471 "response to
ethanol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016594 "glycine binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007215
"glutamate receptor signaling pathway" evidence=TAS] [GO:0007611
"learning or memory" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0009986 "cell surface" evidence=ISS] [GO:0043005 "neuron
projection" evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0021987 GO:GO:0021766
GO:GO:0014069 GO:GO:0009986 GO:GO:0030018 GO:GO:0071363
GO:GO:0007423 GO:GO:0051592 GO:GO:0045471 GO:GO:0060992
GO:GO:0046872 GO:GO:0008144 GO:GO:0042220 GO:GO:0007268
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0051602 GO:GO:0008270
GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0043005
GO:GO:0007616 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0001975 GO:GO:0014049 DrugBank:DB00142 GO:GO:0048511
GO:GO:0030288 GO:GO:0051707 GO:GO:0007611 GO:GO:0043083
GO:GO:0010942 GO:GO:0001508 GO:GO:0008306 GO:GO:0043113
GO:GO:0009743 Pathway_Interaction_DB:reelinpathway GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0051597 GO:GO:0060416
GO:GO:0071230 GO:GO:0071396 DrugBank:DB00836 Orphanet:178469
GO:GO:0001964 GO:GO:0050806 GO:GO:0032026 DrugBank:DB00502
DrugBank:DB01043 DrugBank:DB00949 GO:GO:0010350 GO:GO:0071287
GO:GO:0017146 GO:GO:0042165 GO:GO:0043408 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GO:GO:0071359 GO:GO:0004972
HOVERGEN:HBG052635 InterPro:IPR018884 Pfam:PF10565
HOGENOM:HOG000113802 CTD:2904 KO:K05210 OrthoDB:EOG4Z8XVM
EMBL:U90278 EMBL:U88963 EMBL:U11287 EMBL:BC113618 EMBL:BC113620
EMBL:U28758 EMBL:U28861 EMBL:U28862 IPI:IPI00297933 PIR:I39066
PIR:S52086 RefSeq:NP_000825.2 UniGene:Hs.654430 PDB:1S11 PDB:1S2S
PDB:2IPV PDBsum:1S11 PDBsum:1S2S PDBsum:2IPV
ProteinModelPortal:Q13224 SMR:Q13224 IntAct:Q13224 MINT:MINT-127466
STRING:Q13224 PhosphoSite:Q13224 DMDM:14548162 PaxDb:Q13224
PeptideAtlas:Q13224 PRIDE:Q13224 Ensembl:ENST00000279593
GeneID:2904 KEGG:hsa:2904 UCSC:uc001rbt.2 GeneCards:GC12M013614
H-InvDB:HIX0036873 HGNC:HGNC:4586 MIM:138252 MIM:613970
neXtProt:NX_Q13224 PharmGKB:PA28980 InParanoid:Q13224 OMA:CTNRSHL
PhylomeDB:Q13224 BindingDB:Q13224 ChEMBL:CHEMBL1904 GenomeRNAi:2904
NextBio:11499 ArrayExpress:Q13224 Bgee:Q13224 CleanEx:HS_GRIN2B
Genevestigator:Q13224 GermOnline:ENSG00000150086 Uniprot:Q13224
Length = 1484
Score = 189 (71.6 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 59/237 (24%), Positives = 110/237 (46%)
Query: 304 PTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPY 363
P + +R VP +K K +P + G+ ID+ K + + + + V
Sbjct: 424 PLSGTCMRNTVPCQKRIVTENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTN 483
Query: 364 AQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDS 423
+ +G++N +I +V + VG TI RS VDF++P+ E+G+S++V + +
Sbjct: 484 GKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVS-RSN 542
Query: 424 KKRNAWVFLQPLTWDLWVTSGCFFIFIGFV-VWVLEH-------RVNEDFRGPA--RHQV 473
+ FL+P + D+WV + + V V+V E+ R D R P +
Sbjct: 543 GTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTI 602
Query: 474 GTSFWFSFSTMVFSQRERVIS---NLARFVVIVWCFVVLILIQSYTASLTSLLTVDQ 527
G + W + +VF+ V + ++ +V VW F +I + SYTA+L + + ++
Sbjct: 603 GKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE 658
Score = 74 (31.1 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
D +I+ +L KL Q+ + +L+ + IFE AN +GL G WI+
Sbjct: 213 DSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIV 258
Score = 37 (18.1 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 16/76 (21%), Positives = 30/76 (39%)
Query: 2 ALNDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVI--S 59
A+N++ IT I R+ + + +E I + D + A T P + S
Sbjct: 72 AMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDFISA-QTLTPILGIHGGS 130
Query: 60 PLATDDQIEKELYKLF 75
+ D+ E ++ F
Sbjct: 131 SMIMADKDESSMFFQF 146
>UNIPROTKB|G3N3K3 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060179 "male mating behavior" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0043576
"regulation of respiratory gaseous exchange" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043278 "response to morphine" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0021586
"pons maturation" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0018964 "propylene metabolic process"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0008542 "visual
learning" evidence=IEA] [GO:0008355 "olfactory learning"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008021 "synaptic vesicle" evidence=IEA] [GO:0007616 "long-term
memory" evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=IEA] [GO:0001975 "response to
amphetamine" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0021987 GO:GO:0008355 GO:GO:0014069 GO:GO:0009986
GO:GO:0043278 GO:GO:0019233 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0008344
GO:GO:0001967 GO:GO:0008542 GO:GO:0007616 GO:GO:0005509
GO:GO:0060079 GO:GO:0001975 GO:GO:0043524 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043065 GO:GO:0050770
GO:GO:0048814 GO:GO:0007585 GO:GO:0006874 GO:GO:0001661
GO:GO:0051963 GO:GO:0035176 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0060179 GO:GO:0004972
InterPro:IPR018882 Pfam:PF10562 OMA:VYRSAAM GO:GO:0021586
EMBL:DAAA02032413 EMBL:DAAA02032414 EMBL:DAAA02032415
Ensembl:ENSBTAT00000065439 Uniprot:G3N3K3
Length = 931
Score = 183 (69.5 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 73/308 (23%), Positives = 136/308 (44%)
Query: 367 DGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKR 426
+ ++ +N ++ ++ G+ D +V TI R+ Y++F+ P+ G++++V K+ +
Sbjct: 512 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVK-KEIPRS 570
Query: 427 NAWVFLQPLTWDLWVTSGCF--FIFIGFVVWVLEHRVNEDFRGPARHQVGTSFWFSFSTM 484
F+QP LW+ F F +VN + + ++ WFS+ +
Sbjct: 571 TLDSFMQPFQSTLWLLRPLRPRSPFGRF-------KVNSEEEEEDALTLSSAMWFSWGVL 623
Query: 485 VFSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN--LLIK 540
+ S E + AR + +VW +I++ SYTA+L + L +D+ + IT +N L
Sbjct: 624 LNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRN 683
Query: 541 RGDNVGY---QKGSFVLGILKQLGFDE--RKLVVYNSHEECDELFQKGSANGGIAAAFDE 595
D Y ++ S + +Q+ R + +N +E E Q N A +D
Sbjct: 684 PSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHN-YESAAEAIQAVRDNKLHAFIWDS 742
Query: 596 IPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDA 655
+ Q C T E F++ GFG SP +VS +IL E M++++
Sbjct: 743 A-VLEFEASQKCDLVTTGELFFRS-GFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKT 800
Query: 656 WFKKHSSC 663
W + + C
Sbjct: 801 WVR-YQEC 807
Score = 78 (32.5 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 215 ISQNGPKLLQALSSIRFR-GLTGDYIF-VDGQLQSSAFEIINVNNGAR-GVGFWSPEKGX 271
I + GP + L S ++ G+TG F DG + + + I+N+ N VG ++
Sbjct: 335 IWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN----- 389
Query: 272 XXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPK 331
R IIWPG T P+G+++ T +L++ ++ F +VK T+
Sbjct: 390 ------GTHVIPNDRKIIWPGGETEKPRGYQMST---RLKIVTIHQEPFV-YVKPTLSDG 439
Query: 332 T--QETSVVGYSIDVFKAVI 349
T +E +V G D K VI
Sbjct: 440 TCKEEFTVNG---DPVKKVI 456
Score = 42 (19.8 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 77 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
++ RV IL + ++ A + + G VW++
Sbjct: 235 LEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLV 270
>UNIPROTKB|B4MU83 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7260 "Drosophila willistoni" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH EMBL:CH963852
RefSeq:XP_002064686.1 ProteinModelPortal:B4MU83 STRING:B4MU83
EnsemblMetazoa:FBtr0254355 GeneID:6641663 KEGG:dwi:Dwil_GK23704
FlyBase:FBgn0225666 InParanoid:B4MU83 Uniprot:B4MU83
Length = 982
Score = 162 (62.1 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 69/304 (22%), Positives = 132/304 (43%)
Query: 374 YNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQ 433
+ LI Q+ D +V TI R+ Y++F+ P+ G++ I+ K S+ FLQ
Sbjct: 500 WTGLIGQLVNERADMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQ 558
Query: 434 PLTWDLWVTSGCFFIFIGFVVWVLEH-----RV---NEDFRGPARHQVGTSFWFSFSTMV 485
P + LW+ + V+++L+ R + D + ++ WF++ ++
Sbjct: 559 PFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLL 618
Query: 486 FSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRG- 542
S E + AR + +VW +I++ SYTA+L + L +++ + ++ +N R
Sbjct: 619 NSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNT 678
Query: 543 -DNV--GYQKGSFV-LGILKQLGFDER-KLVVYNSHEECDELFQKGSANGGIAAAFDEIP 597
+N+ KGS V + +Q+ + + N++ + Q G + A +
Sbjct: 679 MENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEHAIQDVK-KGKLMAFIWDSS 737
Query: 598 YAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW- 656
+ + C T E F +G+G SP V+ AIL E M++++ W
Sbjct: 738 RLEYEASKDCELVTAGE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 796
Query: 657 FKKH 660
F H
Sbjct: 797 FHGH 800
Score = 76 (31.8 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 45/176 (25%), Positives = 68/176 (38%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINV--NNGARGVGFWSPEKGXXX 273
++G +L Q L + G TG F D G + +++IN+ N VG +S +
Sbjct: 321 ESGKRLFQYLKTRNITGETGQVAFDDNGDRIYAGYDVINIRENQKQHVVGKFSYDN---- 376
Query: 274 XXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVG----VPVKK-GFSDF----- 323
IIW G P+G IPT+ K L + V V++ G +F
Sbjct: 377 -MRAKMRMKINDSEIIWAGKQKRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFHCEPN 435
Query: 324 -----VKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSY 374
+ T D E GY ID+ + + + + YD PDG G Y
Sbjct: 436 ERPCPLFNTTDATANEFCCSGYCIDLLIELAKRINFT--YDLA--LSPDG-QFGHY 486
Score = 67 (28.6 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 21/106 (19%), Positives = 45/106 (42%)
Query: 15 IIKAFGWREAVPIYVDNQYGEELIPSLTDALQA----IDTRVPYRSVIS--PLATDDQIE 68
++ F + + + I+ + G ++ Q +D R ++ P T
Sbjct: 156 MLSHFSYTKVIIIHSSDTDGRAILGRFQTTSQTYYDDVDVRATVEMIVEFEPKLTS--FS 213
Query: 69 KELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD 114
+ L + T Q+RV++++ IF A + + +G VWI+T+
Sbjct: 214 EHLTYMKTAQSRVYLMYASTEDAQIIFRDARDHNMTQEGHVWIVTE 259
>FB|FBgn0039927 [details] [associations]
symbol:CG11155 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0060025 "regulation of synaptic activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0016020 GO:GO:0030054
GO:GO:0045211 GO:GO:0030288 InterPro:IPR001828 EMBL:AE014135
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0015277
FlyBase:FBgn0039927 UniGene:Dm.10449 GeneID:43822
KEGG:dme:Dmel_CG11155 GenomeRNAi:43822 NextBio:836052 EMBL:BT044556
RefSeq:NP_651941.2 RefSeq:NP_726649.2 SMR:Q9V4A0
EnsemblMetazoa:FBtr0089195 EnsemblMetazoa:FBtr0333701
UCSC:CG11155-RA UCSC:CG11155-RC InParanoid:Q9V4A0 OMA:DIPHIEV
Uniprot:Q9V4A0
Length = 910
Score = 194 (73.4 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 70/297 (23%), Positives = 134/297 (45%)
Query: 292 GDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPK-TQETSVVGYSIDVFKAVIE 350
G + SDP + +N + + V ++ +V V D T G+ ID+ KA+
Sbjct: 408 GVNISDPTAF-YDSNIANITLVVMTREE-RPYVMVKEDKNLTGNLRFEGFCIDLLKAIAT 465
Query: 351 ELPYAVAYDFVPYAQPDGT---SSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTL 407
++ + + VP G + S+N ++ ++ D V TI + R + +DFT
Sbjct: 466 QVGFQYKIELVP-DNMYGVYIPETNSWNGIVQELMERRADLAVASMTINYARESVIDFTK 524
Query: 408 PYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHRVNEDFRG 467
P+ G+ ++ + S+ + F+ PL ++W+ +I + F ++V+ +++
Sbjct: 525 PFMNLGIGILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFSPYEWKN 584
Query: 468 P---------ARHQ--VGTSFWFSFSTMVFSQRERVISNLARFVVIV---WCFVVLILIQ 513
P +Q + SFWF T F ++ ++ A IV W F LI+I
Sbjct: 585 PHPCYKETDIVENQFSISNSFWFITGT--FLRQGSGLNPKATSTRIVGGCWFFFCLIIIS 642
Query: 514 SYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVY 570
SYTA+L + LTV+++ I + L ++ + + Y G+ G F + K+ +Y
Sbjct: 643 SYTANLAAFLTVERMISPIESASDLAEQTE-ISY--GTLEGGSTMTF-FRDSKIGIY 695
Score = 128 (50.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 58/226 (25%), Positives = 105/226 (46%)
Query: 473 VGTSFWFSFSTMVFSQRERVISNLARFVVIV---WCFVVLILIQSYTASLTSLLTVDQLQ 529
+ SFWF T F ++ ++ A IV W F LI+I SYTA+L + LTV+++
Sbjct: 601 ISNSFWFITGT--FLRQGSGLNPKATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMI 658
Query: 530 PTITDVNLLIKRGDNVGY---QKGSFV-------LGILKQLG--FDERKLVVY-NSHEEC 576
I + L ++ + + Y + GS + +GI +++ + RK V+ ++E+
Sbjct: 659 SPIESASDLAEQTE-ISYGTLEGGSTMTFFRDSKIGIYQKMWRYMENRKTAVFVKTYEDG 717
Query: 577 DELFQKGSANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDV 636
+ +GS + + + YA + + C+ T + + G+G A P SP +
Sbjct: 718 IKRVMEGSYAFLMESTM--LDYA---VQRDCN-LTQIGGLLDSKGYGIATPKGSPWRDKI 771
Query: 637 SKAILNVTEGDKMKEIEDAWFKKHSS-C--PDAGTVVSARSLGLNS 679
S AIL + E ++ + D W+K C D A +LG+ +
Sbjct: 772 SLAILELQEKGIIQILYDKWWKNTGDVCNRDDKSKESKANALGVEN 817
Score = 63 (27.2 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 218 NGPKLLQALSSIRFRGLTGDYIFVDGQLQSSAFEIINVNNGA-RGVGFWSPEKG 270
+G L +++ GLTG FV+G+ +I+ + + VG+W P+ G
Sbjct: 355 DGISLYNQINAAITDGLTGTVQFVEGRRNIFKLDILKLKQEKIQKVGYWHPDDG 408
>UNIPROTKB|J9NV46 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:AAEX03016479
Ensembl:ENSCAFT00000048687 Uniprot:J9NV46
Length = 849
Score = 194 (73.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 57/216 (26%), Positives = 99/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ + D V TI +
Sbjct: 406 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITY 465
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 466 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 525
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 526 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 585
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 586 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 621
Score = 152 (58.6 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 503 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 561
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 562 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 621
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 622 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVK--NSDEGIQRVLTT-DY 677
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 678 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 737
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ + A +LG+ +
Sbjct: 738 MKEKWWRGNG-CPEEDSK-EASALGVEN 763
Score = 62 (26.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 28/109 (25%), Positives = 44/109 (40%)
Query: 153 RWKRKFLQENP----SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNAT 208
+W + LQ P L D + L YDA +A+A +A + VSS
Sbjct: 225 KWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRAS-------QLTVSS--L 275
Query: 209 DLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINV 255
+ GP+ + + R+ GLTG F DG + +II++
Sbjct: 276 QCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISL 324
>WB|WBGene00001616 [details] [associations]
symbol:glr-5 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 eggNOG:NOG316680 KO:K05313 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 HSSP:P19491
EMBL:FO080218 PIR:T25941 RefSeq:NP_505244.1
ProteinModelPortal:O01623 SMR:O01623 STRING:O01623
EnsemblMetazoa:ZC196.7 GeneID:179251 KEGG:cel:CELE_ZC196.7
UCSC:ZC196.7 CTD:179251 WormBase:ZC196.7 HOGENOM:HOG000016348
InParanoid:O01623 OMA:IFRERED NextBio:904564 ArrayExpress:O01623
Uniprot:O01623
Length = 932
Score = 156 (60.0 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 44/181 (24%), Positives = 89/181 (49%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQ--PDGTSSGSYNDLIYQVFLGEFDAVVGDTTIV 396
G+ ID+ + ++L + V + D +GS++ ++ ++ GE + V T+
Sbjct: 467 GFCIDLLAELSKDLGFTYTIHAVKDGKYGNDKYGNGSWDGMMGEILRGEAEMAVAPLTVN 526
Query: 397 FNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIFIG--F 452
+ RS VDFT P+ G+S++ + D ++ + + FL PL+W +W + + + +G F
Sbjct: 527 YRRSEAVDFTKPFLSLGISILYKVPDDQQPDLFSFLNPLSWQIWTAIATSIITVTLGMYF 586
Query: 453 VVWVLEHRVNEDFRGPARHQVGTSFWFSFSTMVFSQRERVISNLARFVVIVWCFVVLILI 512
V V + N +F H+ + +F+T + V+SN F VW +V+ ++
Sbjct: 587 VANVTPYEWNLNFSCCTAHEPHPAA--AFATN--QEAPIVMSNNYSFWNTVW-YVLSTML 641
Query: 513 Q 513
+
Sbjct: 642 K 642
Score = 95 (38.5 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 58/283 (20%), Positives = 115/283 (40%)
Query: 478 WFSFSTMVFSQRE---RVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
W+ STM+ + R +S R + W L++I +YTA+L ++LTV + I +
Sbjct: 634 WYVLSTMLKGGCDFGPRAVST--RLLGGTWWVFYLVIISAYTANLAAVLTVSRPYIPIKN 691
Query: 535 VNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNS---HEECDELFQKGSANG-GIA 590
++ L + + Y G+ G Q F E ++ + + + ++F ++NG G+
Sbjct: 692 LDDLANQ-TTISY--GTIRGGSTMQF-FQESRIAAHVKMWQYMKDKDVFV--TSNGKGVE 745
Query: 591 AAFDEIPYAKLLIG--------QHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILN 642
A + YA L+ Q+C+ T + + G+G A S +S+ IL
Sbjct: 746 RALS-MNYAYLMESTSLEYETQQNCN-LTQIGGVLGSKGYGIALAKKSEWTDRISRQILL 803
Query: 643 VTEGDKMKEIEDAWFK-KHSSCPDAGTVVSARSLGLNSFWXXXXXXXXXXXXXXXXXXXV 701
+ ++ + W++ K ++C + V L+ + +
Sbjct: 804 YAKRGIIEMKKTKWWRSKGAACASTASAVKHDRFALSMYNVAGLFITLGVGIVLAAIVVI 863
Query: 702 F--VHEHWNVLKNSESSLLSRIRIFLRIFVSRD-LSAHTFKDK 741
F +H ++ K L + LR ++ + LS H + K
Sbjct: 864 FELIHRCHHIAKKEGKPFLEELLYELRFALNMNSLSDHRSRQK 906
Score = 53 (23.7 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVDGQLQSSAF----EIINVNNGARGVGFWSP 267
Q+G L+ + GL+GD ++G S F +++ + +GFW P
Sbjct: 355 QHGRSLIDNIVHNDLHGLSGDLRRLNGHPLKSNFSMRIQLLGYSGRLDDIGFWEP 409
>UNIPROTKB|F1P9T1 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:AAEX03016479
Ensembl:ENSCAFT00000013975 Uniprot:F1P9T1
Length = 879
Score = 194 (73.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 57/216 (26%), Positives = 99/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ + D V TI +
Sbjct: 438 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITY 497
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 498 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 557
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 558 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 617
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 618 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 653
Score = 152 (58.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 535 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 593
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 594 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 653
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 654 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVK--NSDEGIQRVLTT-DY 709
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 710 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 769
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ + A +LG+ +
Sbjct: 770 MKEKWWRGNG-CPEEDSK-EASALGVEN 795
Score = 62 (26.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 28/109 (25%), Positives = 44/109 (40%)
Query: 153 RWKRKFLQENP----SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNAT 208
+W + LQ P L D + L YDA +A+A +A + VSS
Sbjct: 257 KWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRAS-------QLTVSS--L 307
Query: 209 DLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINV 255
+ GP+ + + R+ GLTG F DG + +II++
Sbjct: 308 QCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIISL 356
>UNIPROTKB|B4KD90 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7230 "Drosophila mojavensis" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH933806 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_001999411.1
ProteinModelPortal:B4KD90 EnsemblMetazoa:FBtr0175219 GeneID:6573325
KEGG:dmo:Dmoj_GI24494 FlyBase:FBgn0147216 InParanoid:B4KD90
Uniprot:B4KD90
Length = 980
Score = 161 (61.7 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 68/304 (22%), Positives = 133/304 (43%)
Query: 374 YNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQ 433
+ LI ++ D +V TI R+ Y++F+ P+ G++ I+ K S+ FLQ
Sbjct: 509 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQ 567
Query: 434 PLTWDLWVTSGCFFIFIGFVVWVLEH-----RV---NEDFRGPARHQVGTSFWFSFSTMV 485
P + LW+ + V+++L+ R + D + ++ WF++ ++
Sbjct: 568 PFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAIWFAWGVLL 627
Query: 486 FSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRG- 542
S E + AR + +VW +I++ SYTA+L + L +++ + ++ +N R
Sbjct: 628 NSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNT 687
Query: 543 -DNV--GYQKGSFV-LGILKQLGFDER-KLVVYNSHEECDELFQKGSANGGIAAAFDEIP 597
+N+ KGS V + +Q+ + + N++ ++ Q G + A +
Sbjct: 688 MENLTCATVKGSSVDMYFRRQVELSNMYRTMESNNYVTAEQAIQDVK-KGKLMAFIWDSS 746
Query: 598 YAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW- 656
+ + C T E F +G+G SP V+ AIL E M++++ W
Sbjct: 747 RLEYEASKDCELVTAGE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 805
Query: 657 FKKH 660
F H
Sbjct: 806 FHGH 809
Score = 74 (31.1 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 27/99 (27%), Positives = 42/99 (42%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWSPEKGXXX 273
++G +L Q L S G TG F D G + +++IN+ + + VG +S +
Sbjct: 329 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIRDHQKQHIVGKFSYDS---- 384
Query: 274 XXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRV 312
IIW G P+G IPT+ K L +
Sbjct: 385 -LKAKMIMRINDSQIIWGGKQRRKPEGIMIPTHLKVLTI 422
Score = 69 (29.3 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 48 IDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKG 107
+D R ++ + + L + T Q+RV++++ IF A E + +G
Sbjct: 201 VDARATVELIVEFEPKLESFTEHLIDMKTAQSRVYLVYASTEDAQVIFRDAAEYNMTGEG 260
Query: 108 CVWIMTD 114
VWI+T+
Sbjct: 261 HVWIVTE 267
>UNIPROTKB|B4JHV0 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7222 "Drosophila grimshawi" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH916369 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_001989796.1 ProteinModelPortal:B4JHV0 STRING:B4JHV0
EnsemblMetazoa:FBtr0154407 GeneID:6563892 KEGG:dgr:Dgri_GH18993
FlyBase:FBgn0126460 InParanoid:B4JHV0 OMA:WLEMLSH Uniprot:B4JHV0
Length = 982
Score = 160 (61.4 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 68/304 (22%), Positives = 133/304 (43%)
Query: 374 YNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQ 433
+ LI ++ D +V TI R+ Y++F+ P+ G++ I+ K S+ FLQ
Sbjct: 507 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQ 565
Query: 434 PLTWDLWVTSGCFFIFIGFVVWVLEH-----RV---NEDFRGPARHQVGTSFWFSFSTMV 485
P + LW+ + V+++L+ R + D + ++ WF++ ++
Sbjct: 566 PFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLL 625
Query: 486 FSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRG- 542
S E + AR + +VW +I++ SYTA+L + L +++ + ++ +N R
Sbjct: 626 NSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNT 685
Query: 543 -DNV--GYQKGSFV-LGILKQLGFDER-KLVVYNSHEECDELFQKGSANGGIAAAFDEIP 597
+N+ KGS V + +Q+ + + N++ ++ Q G + A +
Sbjct: 686 MENLTCATVKGSSVDMYFRRQVELSNMYRTMESNNYVTAEQAIQDVK-KGKLMAFIWDSS 744
Query: 598 YAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW- 656
+ + C T E F +G+G SP V+ AIL E M++++ W
Sbjct: 745 RLEYEASKDCELVTAGE-LFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWI 803
Query: 657 FKKH 660
F H
Sbjct: 804 FHGH 807
Score = 72 (30.4 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 48 IDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKG 107
+D R ++ + + L + T Q+RV++++ IF A E + +G
Sbjct: 199 VDVRATVELIVEFEPKLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEG 258
Query: 108 CVWIMTD 114
VWI+T+
Sbjct: 259 HVWIVTE 265
Score = 72 (30.4 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 27/99 (27%), Positives = 41/99 (41%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWSPEKGXXX 273
++G +L Q L S G TG F D G + +++IN+ + VG +S +
Sbjct: 327 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREHQKQHVVGKFSYDSPRGK 386
Query: 274 XXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRV 312
IIW G P+G IPT+ K L +
Sbjct: 387 MRMRINDSE-----IIWGGKQKRKPEGIMIPTHLKLLTI 420
>FB|FBgn0026255 [details] [associations]
symbol:clumsy "clumsy" species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0060025 "regulation of synaptic activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 EMBL:AE014134 GO:GO:0030054 GO:GO:0045211
GO:GO:0030288 InterPro:IPR001828 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0015277
RefSeq:NP_001036373.1 UniGene:Dm.12535 ProteinModelPortal:Q0E8N6
SMR:Q0E8N6 STRING:Q0E8N6 PRIDE:Q0E8N6 EnsemblMetazoa:FBtr0110895
GeneID:35394 KEGG:dme:Dmel_CG8681 UCSC:CG8681-RB CTD:35394
FlyBase:FBgn0026255 OMA:WTAMESA OrthoDB:EOG4FQZ6P PhylomeDB:Q0E8N6
GenomeRNAi:35394 NextBio:793295 Bgee:Q0E8N6 Uniprot:Q0E8N6
Length = 1002
Score = 186 (70.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 53/239 (22%), Positives = 106/239 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTS--SGSYNDLIYQVFLGEFDAVVGDTTIV 396
GYSID+ + + L + + P + + + +++ ++ Q+ G D + D T+
Sbjct: 447 GYSIDLINEIAKMLNFKFEFRMSPDGKYGALNKVTQTWDGIVRQLIDGNADLGICDLTMT 506
Query: 397 FNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWV 456
+R VDFT P+ G+S++ + + + FL P + D+W+ G ++FI +++
Sbjct: 507 SSRRQAVDFTPPFMTLGISILFSKPPTPPTDLFSFLSPFSLDVWIYMGSAYLFISLLLFA 566
Query: 457 LEHRVNEDFRGP--ARH--------QVGTSFWFSFSTMVFSQRERVISNLA--RFVVIVW 504
L +D+ P + + + W S +++ Q ++ A R V +W
Sbjct: 567 LARMAPDDWENPHPCKEPEEVENIWSIMNTTWLSIGSLM-GQGCDILPKAASTRLVTGMW 625
Query: 505 CFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQKGSFVLGILKQLGF 562
F L+++ SYTA+L + LT + +I L + G G +G + F
Sbjct: 626 WFFALMMLNSYTANLAAFLTNSRQANSINSAEDLAAQSKIKYGAMAGGSTMGFFRDSNF 684
Score = 110 (43.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 44/196 (22%), Positives = 81/196 (41%)
Query: 478 WFSFSTMVFSQRERVISNLA--RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDV 535
W S +++ Q ++ A R V +W F L+++ SYTA+L + LT + +I
Sbjct: 598 WLSIGSLM-GQGCDILPKAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQANSINSA 656
Query: 536 NLLIKRGD-NVGYQKGSFVLGILKQLGFDE-RKL----------VVYNSHEECDELFQKG 583
L + G G +G + F +K+ V +++E E QKG
Sbjct: 657 EDLAAQSKIKYGAMAGGSTMGFFRDSNFSTYQKMWTAMESASPSVFTKTNDEGVERVQKG 716
Query: 584 SANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNV 643
+ A E + + + C + +G A P +SP +S A+L +
Sbjct: 717 K---NLYAFLMESTTLEYNVERKCD-LVQIGGWLDYKSYGIAMPFNSPYRKQISAAVLKL 772
Query: 644 TEGDKMKEIEDAWFKK 659
E ++ E++ W+K+
Sbjct: 773 GELGQLAELKRKWWKE 788
Score = 71 (30.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 22/95 (23%), Positives = 42/95 (44%)
Query: 12 ITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKEL 71
+ I+++F WR +Y + +EL L D LQ + + + + L D L
Sbjct: 145 LAEIVQSFAWRSFTVVY---ETDKEL-QQLQDILQ-VGEPISNPTTVKQLGPGDDHRPFL 199
Query: 72 YKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNK 106
++ ILH P +I ++ANE+ ++ +
Sbjct: 200 KEIKLSTDNCLILHCAPDNLLKILQQANELKMLGE 234
>RGD|2734 [details] [associations]
symbol:Grik4 "glutamate receptor, ionotropic, kainate 4"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=TAS] [GO:0007268
"synaptic transmission" evidence=TAS] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=TAS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=TAS] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030424
"axon" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0031960
"response to corticosteroid stimulus" evidence=IEP] [GO:0032983
"kainate selective glutamate receptor complex" evidence=ISO]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=TAS] [GO:0042734 "presynaptic membrane" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IEA;ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060
Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2734 GO:GO:0005634 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0043204 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 GO:GO:0031960 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2900 KO:K05204 OrthoDB:EOG402WRF EMBL:X59996
EMBL:U08257 IPI:IPI00326553 PIR:JS0685 RefSeq:NP_036704.1
UniGene:Rn.10049 ProteinModelPortal:Q01812 SMR:Q01812 STRING:Q01812
PRIDE:Q01812 GeneID:24406 KEGG:rno:24406 UCSC:RGD:2734
InParanoid:Q01812 BindingDB:Q01812 ChEMBL:CHEMBL3044 NextBio:603213
ArrayExpress:Q01812 Genevestigator:Q01812
GermOnline:ENSRNOG00000030910 Uniprot:Q01812
Length = 956
Score = 152 (58.6 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 49/216 (22%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
G+ +D+ K + E L + V Y P+ ++G++ ++ ++ + D V TI
Sbjct: 446 GFCVDMLKELAEILRFNYKIRLVGDGVYGVPE--ANGTWTGMVGELIARKADLAVAGLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVW 455
R +DF+ P+ G+S++ + ++ + L P + +W+ ++ + V++
Sbjct: 504 TAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSSLDPFSPGVWLFMLLAYLAVSCVLF 563
Query: 456 VLEHRVNEDFRGPA------------RHQVGTSFWFSFSTMVFSQRERVISNLA---RFV 500
++ ++ P ++ +G S WF F Q+ I+ A R V
Sbjct: 564 LVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGG--FMQQGSTIAPRALSTRCV 621
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
VW LI+I SYTA+L + LTV +++ I V+
Sbjct: 622 SGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVD 657
Score = 129 (50.5 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 58/226 (25%), Positives = 97/226 (42%)
Query: 470 RHQVGTSFWFSFSTMVFSQRERVISNLA---RFVVIVWCFVVLILIQSYTASLTSLLTVD 526
++ +G S WF F Q+ I+ A R V VW LI+I SYTA+L + LTV
Sbjct: 590 QYSLGNSLWFPVGG--FMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQ 647
Query: 527 QLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNS-----HEECDELFQ 581
+++ I V+ L D + G+ + G F + Y + + +F
Sbjct: 648 RMEVPIESVDDL---ADQTAIEYGT-IHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVFV 703
Query: 582 KGSANGGIAAAFDEIPYAKLLIG--------QHCSKYTMVEPTFKTAGFGFAFPLHSPLV 633
K S GIA + YA LL ++C+ T + T G+G P+ S
Sbjct: 704 K-STEEGIARVLNS-NYAFLLESTMNEYYRQRNCN-LTQIGGLLDTKGYGIGMPVGSVFR 760
Query: 634 HDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ AIL + E ++++ ++ W++ CP A+ LG+ +
Sbjct: 761 DEFDLAILQLQENNRLEILKRKWWEG-GKCPKEEDH-RAKGLGMEN 804
Score = 105 (42.0 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 47/197 (23%), Positives = 80/197 (40%)
Query: 78 QTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDSMQGVIGV 137
+T I+H S+ I KA E+G+++ +I T+ +L R S+ D ++G
Sbjct: 211 KTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRM--DSLVDDRVNILGF 268
Query: 138 RPYVPKTKALENFRVRWKRKFLQENPSL--FDAELNIFGLLAYDATSALAVAVEKAGITG 195
+ + F + + QEN F + L +DA A+ AV++ +
Sbjct: 269 SIFNQSHAFFQEFSQSLNQSW-QENCDHVPFTGPA-LSSALLFDAVYAVVTAVQELNRS- 325
Query: 196 FGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIIN 254
+ + I Q+G L+ L + GLTG F GQ + A +I+
Sbjct: 326 -----QEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQ 380
Query: 255 -VNNGARGVGFWSPEKG 270
NG R +G W +G
Sbjct: 381 FTRNGFRQIGQWHVAEG 397
>UNIPROTKB|Q01812 [details] [associations]
symbol:Grik4 "Glutamate receptor ionotropic, kainate 4"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2734
GO:GO:0005634 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0043204 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 GO:GO:0031960 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2900 KO:K05204 OrthoDB:EOG402WRF EMBL:X59996
EMBL:U08257 IPI:IPI00326553 PIR:JS0685 RefSeq:NP_036704.1
UniGene:Rn.10049 ProteinModelPortal:Q01812 SMR:Q01812 STRING:Q01812
PRIDE:Q01812 GeneID:24406 KEGG:rno:24406 UCSC:RGD:2734
InParanoid:Q01812 BindingDB:Q01812 ChEMBL:CHEMBL3044 NextBio:603213
ArrayExpress:Q01812 Genevestigator:Q01812
GermOnline:ENSRNOG00000030910 Uniprot:Q01812
Length = 956
Score = 152 (58.6 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 49/216 (22%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
G+ +D+ K + E L + V Y P+ ++G++ ++ ++ + D V TI
Sbjct: 446 GFCVDMLKELAEILRFNYKIRLVGDGVYGVPE--ANGTWTGMVGELIARKADLAVAGLTI 503
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVW 455
R +DF+ P+ G+S++ + ++ + L P + +W+ ++ + V++
Sbjct: 504 TAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSSLDPFSPGVWLFMLLAYLAVSCVLF 563
Query: 456 VLEHRVNEDFRGPA------------RHQVGTSFWFSFSTMVFSQRERVISNLA---RFV 500
++ ++ P ++ +G S WF F Q+ I+ A R V
Sbjct: 564 LVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGG--FMQQGSTIAPRALSTRCV 621
Query: 501 VIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
VW LI+I SYTA+L + LTV +++ I V+
Sbjct: 622 SGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVD 657
Score = 129 (50.5 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 58/226 (25%), Positives = 97/226 (42%)
Query: 470 RHQVGTSFWFSFSTMVFSQRERVISNLA---RFVVIVWCFVVLILIQSYTASLTSLLTVD 526
++ +G S WF F Q+ I+ A R V VW LI+I SYTA+L + LTV
Sbjct: 590 QYSLGNSLWFPVGG--FMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQ 647
Query: 527 QLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNS-----HEECDELFQ 581
+++ I V+ L D + G+ + G F + Y + + +F
Sbjct: 648 RMEVPIESVDDL---ADQTAIEYGT-IHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVFV 703
Query: 582 KGSANGGIAAAFDEIPYAKLLIG--------QHCSKYTMVEPTFKTAGFGFAFPLHSPLV 633
K S GIA + YA LL ++C+ T + T G+G P+ S
Sbjct: 704 K-STEEGIARVLNS-NYAFLLESTMNEYYRQRNCN-LTQIGGLLDTKGYGIGMPVGSVFR 760
Query: 634 HDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+ AIL + E ++++ ++ W++ CP A+ LG+ +
Sbjct: 761 DEFDLAILQLQENNRLEILKRKWWEG-GKCPKEEDH-RAKGLGMEN 804
Score = 105 (42.0 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 47/197 (23%), Positives = 80/197 (40%)
Query: 78 QTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDSMQGVIGV 137
+T I+H S+ I KA E+G+++ +I T+ +L R S+ D ++G
Sbjct: 211 KTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRM--DSLVDDRVNILGF 268
Query: 138 RPYVPKTKALENFRVRWKRKFLQENPSL--FDAELNIFGLLAYDATSALAVAVEKAGITG 195
+ + F + + QEN F + L +DA A+ AV++ +
Sbjct: 269 SIFNQSHAFFQEFSQSLNQSW-QENCDHVPFTGPA-LSSALLFDAVYAVVTAVQELNRS- 325
Query: 196 FGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIIN 254
+ + I Q+G L+ L + GLTG F GQ + A +I+
Sbjct: 326 -----QEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQ 380
Query: 255 -VNNGARGVGFWSPEKG 270
NG R +G W +G
Sbjct: 381 FTRNGFRQIGQWHVAEG 397
>RGD|2732 [details] [associations]
symbol:Grik1 "glutamate receptor, ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0008144 "drug binding" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IDA] [GO:0014054
"positive regulation of gamma-aminobutyric acid secretion"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=IDA] [GO:0022843 "voltage-gated cation
channel activity" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0030534
"adult behavior" evidence=ISO] [GO:0032229 "negative regulation of
synaptic transmission, GABAergic" evidence=IDA] [GO:0032230 "positive
regulation of synaptic transmission, GABAergic" evidence=ISO;IDA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISO] [GO:0042391 "regulation of membrane
potential" evidence=ISO] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043235 "receptor
complex" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0048167 "regulation of synaptic plasticity"
evidence=TAS] [GO:0048172 "regulation of short-term neuronal synaptic
plasticity" evidence=IDA] [GO:0048266 "behavioral response to pain"
evidence=ISO] [GO:0051899 "membrane depolarization" evidence=ISO]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0042803
GO:GO:0007399 GO:GO:0008144 GO:GO:0032229 GO:GO:0051967 GO:GO:0007268
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0030425
GO:GO:0048266 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0048172 GO:GO:0016595 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2897 KO:K05201 GO:GO:0022843 EMBL:M83560
EMBL:M83561 EMBL:Z11712 EMBL:Z11713 EMBL:Z11714 IPI:IPI00231402
IPI:IPI00569872 IPI:IPI00951061 IPI:IPI00952320 PIR:S19808
RefSeq:NP_001104584.1 RefSeq:NP_001104587.1 RefSeq:NP_058937.1
UniGene:Rn.10449 PDB:1TXF PDB:1VSO PDB:1YCJ PDB:2F34 PDB:2F35
PDB:2F36 PDB:2OJT PDB:2PBW PDB:2QS1 PDB:2QS2 PDB:2QS3 PDB:2QS4
PDB:2WKY PDB:3C31 PDB:3C32 PDB:3C33 PDB:3C34 PDB:3C35 PDB:3C36
PDB:3GBA PDB:3GBB PDB:3S2V PDB:4DLD PDB:4E0X PDBsum:1TXF PDBsum:1VSO
PDBsum:1YCJ PDBsum:2F34 PDBsum:2F35 PDBsum:2F36 PDBsum:2OJT
PDBsum:2PBW PDBsum:2QS1 PDBsum:2QS2 PDBsum:2QS3 PDBsum:2QS4
PDBsum:2WKY PDBsum:3C31 PDBsum:3C32 PDBsum:3C33 PDBsum:3C34
PDBsum:3C35 PDBsum:3C36 PDBsum:3GBA PDBsum:3GBB PDBsum:3S2V
PDBsum:4DLD PDBsum:4E0X ProteinModelPortal:P22756 SMR:P22756
DIP:DIP-29257N STRING:P22756 TCDB:1.A.10.1.5 PhosphoSite:P22756
PRIDE:P22756 GeneID:29559 KEGG:rno:29559 UCSC:RGD:2732
InParanoid:P22756 BindingDB:P22756 ChEMBL:CHEMBL2919
EvolutionaryTrace:P22756 NextBio:609606 ArrayExpress:P22756
Genevestigator:P22756 GermOnline:ENSRNOG00000001575 Uniprot:P22756
Length = 949
Score = 187 (70.9 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 56/215 (26%), Positives = 97/215 (45%)
Query: 340 YSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVFN 398
Y +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 478 YCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYV 537
Query: 399 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV- 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 538 REKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIA 597
Query: 455 ------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWCF 506
W H N D + + SFWF ++ E + L+ R V +W F
Sbjct: 598 RFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWF 657
Query: 507 VVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 658 FTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 692
Score = 153 (58.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 574 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 632
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 633 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 692
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 693 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVK--NSDEGIQRVLTT-DY 748
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 749 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 808
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ + A +LG+ +
Sbjct: 809 MKEKWWRGNG-CPEEDSK-EASALGVEN 834
Score = 66 (28.3 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 51/252 (20%), Positives = 92/252 (36%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ ++ + W+ +Y D+ G + L A + ++ R + P A D K
Sbjct: 160 AVLDLVLYYNWKTVTVVYEDST-GLIRLQELIKAPSRYNIKIKIRQL--PPANKDA--KP 214
Query: 71 LYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTD 129
L K +++ + I ++ +G+M + + T + LE
Sbjct: 215 LLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT-LDLFALDLE-LYRY 272
Query: 130 SMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSALA 185
S + G R + + +W + LQ P L D + L YDA +A
Sbjct: 273 SGVNMTGFRKLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 332
Query: 186 VAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VDG 243
+A +A + VSS GP+ + + R+ GLTG F DG
Sbjct: 333 IASHRAS-------QLTVSS--LQCHRHKPCALGPRFMNLIKEARWDGLTGRITFNKTDG 383
Query: 244 QLQSSAFEIINV 255
+ +II++
Sbjct: 384 LRKDFDLDIISL 395
>UNIPROTKB|P22756 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0042803
GO:GO:0007399 GO:GO:0008144 GO:GO:0032229 GO:GO:0051967
GO:GO:0007268 GO:GO:0014054 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0030425 GO:GO:0048266 GO:GO:0060079
GO:GO:0042734 GO:GO:0043195 GO:GO:0032230 GO:GO:0060080
GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828 GO:GO:0048172
GO:GO:0016595 eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983
CTD:2897 KO:K05201 GO:GO:0022843 EMBL:M83560 EMBL:M83561
EMBL:Z11712 EMBL:Z11713 EMBL:Z11714 IPI:IPI00231402 IPI:IPI00569872
IPI:IPI00951061 IPI:IPI00952320 PIR:S19808 RefSeq:NP_001104584.1
RefSeq:NP_001104587.1 RefSeq:NP_058937.1 UniGene:Rn.10449 PDB:1TXF
PDB:1VSO PDB:1YCJ PDB:2F34 PDB:2F35 PDB:2F36 PDB:2OJT PDB:2PBW
PDB:2QS1 PDB:2QS2 PDB:2QS3 PDB:2QS4 PDB:2WKY PDB:3C31 PDB:3C32
PDB:3C33 PDB:3C34 PDB:3C35 PDB:3C36 PDB:3GBA PDB:3GBB PDB:3S2V
PDB:4DLD PDB:4E0X PDBsum:1TXF PDBsum:1VSO PDBsum:1YCJ PDBsum:2F34
PDBsum:2F35 PDBsum:2F36 PDBsum:2OJT PDBsum:2PBW PDBsum:2QS1
PDBsum:2QS2 PDBsum:2QS3 PDBsum:2QS4 PDBsum:2WKY PDBsum:3C31
PDBsum:3C32 PDBsum:3C33 PDBsum:3C34 PDBsum:3C35 PDBsum:3C36
PDBsum:3GBA PDBsum:3GBB PDBsum:3S2V PDBsum:4DLD PDBsum:4E0X
ProteinModelPortal:P22756 SMR:P22756 DIP:DIP-29257N STRING:P22756
TCDB:1.A.10.1.5 PhosphoSite:P22756 PRIDE:P22756 GeneID:29559
KEGG:rno:29559 UCSC:RGD:2732 InParanoid:P22756 BindingDB:P22756
ChEMBL:CHEMBL2919 EvolutionaryTrace:P22756 NextBio:609606
ArrayExpress:P22756 Genevestigator:P22756
GermOnline:ENSRNOG00000001575 Uniprot:P22756
Length = 949
Score = 187 (70.9 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 56/215 (26%), Positives = 97/215 (45%)
Query: 340 YSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVFN 398
Y +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 478 YCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYV 537
Query: 399 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV- 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 538 REKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIA 597
Query: 455 ------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWCF 506
W H N D + + SFWF ++ E + L+ R V +W F
Sbjct: 598 RFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWF 657
Query: 507 VVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 658 FTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 692
Score = 153 (58.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 574 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 632
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 633 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 692
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 693 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVK--NSDEGIQRVLTT-DY 748
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 749 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 808
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ + A +LG+ +
Sbjct: 809 MKEKWWRGNG-CPEEDSK-EASALGVEN 834
Score = 66 (28.3 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 51/252 (20%), Positives = 92/252 (36%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ ++ + W+ +Y D+ G + L A + ++ R + P A D K
Sbjct: 160 AVLDLVLYYNWKTVTVVYEDST-GLIRLQELIKAPSRYNIKIKIRQL--PPANKDA--KP 214
Query: 71 LYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTD 129
L K +++ + I ++ +G+M + + T + LE
Sbjct: 215 LLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT-LDLFALDLE-LYRY 272
Query: 130 SMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSALA 185
S + G R + + +W + LQ P L D + L YDA +A
Sbjct: 273 SGVNMTGFRKLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 332
Query: 186 VAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VDG 243
+A +A + VSS GP+ + + R+ GLTG F DG
Sbjct: 333 IASHRAS-------QLTVSS--LQCHRHKPCALGPRFMNLIKEARWDGLTGRITFNKTDG 383
Query: 244 QLQSSAFEIINV 255
+ +II++
Sbjct: 384 LRKDFDLDIISL 395
>WB|WBGene00001612 [details] [associations]
symbol:glr-1 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA;IDA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009612
"response to mechanical stimulus" evidence=IMP] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISS]
[GO:0007631 "feeding behavior" evidence=IMP] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0043025 "neuronal cell
body" evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex"
evidence=ISS;IPI] [GO:0030425 "dendrite" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0016595 "glutamate
binding" evidence=ISS] [GO:0050913 "sensory perception of bitter
taste" evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0014069 "postsynaptic density" evidence=IDA] [GO:0007614
"short-term memory" evidence=IMP] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IDA] [GO:0006972
"hyperosmotic response" evidence=IMP] [GO:0001966 "thigmotaxis"
evidence=IMP] [GO:0032589 "neuron projection membrane"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009612 GO:GO:0007631 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0035249 GO:GO:0006972 GO:GO:0007614
InterPro:IPR001828 GO:GO:0001966 GO:GO:0016595 EMBL:FO080280
GO:GO:0032589 eggNOG:NOG316680 GeneTree:ENSGT00590000082809
KO:K05313 GO:GO:0008328 GO:GO:0004971 GO:GO:0005234 EMBL:U34661
PIR:B88533 PIR:S60225 RefSeq:NP_498887.2 UniGene:Cel.6005
ProteinModelPortal:P34299 SMR:P34299 STRING:P34299 PaxDb:P34299
EnsemblMetazoa:C06E1.4 GeneID:176204 KEGG:cel:CELE_C06E1.4
UCSC:C06E1.4 CTD:176204 WormBase:C06E1.4 HOGENOM:HOG000234372
InParanoid:P34299 OMA:LINIRSA NextBio:891570 GO:GO:0050913
Uniprot:P34299
Length = 962
Score = 209 (78.6 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 61/235 (25%), Positives = 113/235 (48%)
Query: 339 GYSIDVFKAV---IEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
G+ ID+ K + IEE Y + ++ + GS++ +I ++ G AVV TI
Sbjct: 494 GFCIDLLKLLADKIEEFNYEIKLGTKAGSKQ---ADGSWDGMIGELLSGRAHAVVASLTI 550
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVW 455
R VDF+ P+ +G+S+++ D ++ + + F+QPL+ ++W+ +I + V++
Sbjct: 551 NQERERVVDFSKPFMTTGISIMIKKPDKQEFSVFSFMQPLSTEIWMYIIFAYIGVSVVIF 610
Query: 456 VL------EHRVNEDFRGPAR----HQVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVW 504
++ E RV E RG V WF+ + + + + +++ R W
Sbjct: 611 LVSRFSPYEWRVEETSRGGFTISNDFSVYNCLWFTLAAFMQQGTDILPRSISGRIASSAW 670
Query: 505 CFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQKGSFVLGILK 558
F +I++ SYTA+L + LT++++Q I V L K+ G Q G K
Sbjct: 671 WFFTMIIVSSYTANLAAFLTLEKMQAPIESVEDLAKQSKIKYGIQGGGSTASFFK 725
Score = 153 (58.9 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 60/236 (25%), Positives = 96/236 (40%)
Query: 458 EHRVNEDFRGPAR----HQVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILI 512
E RV E RG V WF+ + + + + +++ R W F +I++
Sbjct: 619 EWRVEETSRGGFTISNDFSVYNCLWFTLAAFMQQGTDILPRSISGRIASSAWWFFTMIIV 678
Query: 513 QSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQKGSFVLGILKQLGFDERKLVVYN 571
SYTA+L + LT++++Q I V L K+ G Q G K + +
Sbjct: 679 SSYTANLAAFLTLEKMQAPIESVEDLAKQSKIKYGIQGGGSTASFFKYSSVQIYQRMWRY 738
Query: 572 SHEECDELFQKGSANGGIAAAFDEIPYAKLLIGQHCSKY--------TM-VEPTFKTAGF 622
+ +F A G + YA LL ++Y TM V + G+
Sbjct: 739 MESQVPPVFVASYAEGIERVRSHKGRYAFLLEAT-ANEYENTRKPCDTMKVGANLNSIGY 797
Query: 623 GFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLN 678
G A P S ++ AIL + E ++K++E+ W+ C DAG V S LN
Sbjct: 798 GIATPFGSDWKDHINLAILALQERGELKKLENKWWYDRGQC-DAGITVDGSSASLN 852
Score = 46 (21.3 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 29 VDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHML 87
VD + G E I ++DAL+ +P S ++ L+ DD +++ LF + R I +L
Sbjct: 102 VDGK-GREGIRGVSDALE-----MPLVS-LTALSNDDHQQQQFGNLFEVSVRPPISELL 153
Score = 42 (19.8 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 239 IFVDGQLQSSAFEIINVNNGARGVGFWSPEK 269
+F +G + S F IIN + G +WS +K
Sbjct: 268 MFQNGNINISGFNIINKD----GREYWSLKK 294
Score = 41 (19.5 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 354 YAVA-YDFVPYAQPDGTSSGSYN 375
Y +A YDF+PY Q + +G+ N
Sbjct: 254 YVLANYDFLPYDQ-EMFQNGNIN 275
>UNIPROTKB|B4LZB5 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7244 "Drosophila virilis" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH940650 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_002054630.1 ProteinModelPortal:B4LZB5 STRING:B4LZB5
EnsemblMetazoa:FBtr0240485 GeneID:6630672 KEGG:dvi:Dvir_GJ24560
FlyBase:FBgn0211640 InParanoid:B4LZB5 OMA:HVANELH Uniprot:B4LZB5
Length = 984
Score = 155 (59.6 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 67/304 (22%), Positives = 132/304 (43%)
Query: 374 YNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQ 433
+ LI ++ D +V TI R+ Y++F+ P+ G++ I+ K S+ FLQ
Sbjct: 509 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQ 567
Query: 434 PLTWDLWVTSGCFFIFIGFVVWVLEH-----RV---NEDFRGPARHQVGTSFWFSFSTMV 485
P + LW+ + V+++L+ R + D + ++ WF++ ++
Sbjct: 568 PFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLL 627
Query: 486 FSQ-RERVISNL-ARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRG- 542
S E + AR + +VW +I++ SYTA+L + L +++ + ++ +N R
Sbjct: 628 NSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNT 687
Query: 543 -DNV--GYQKGSFV-LGILKQLGFDER-KLVVYNSHEECDELFQKGSANGGIAAAFDEIP 597
+N+ KGS V + +Q+ + + N++ ++ Q G + A +
Sbjct: 688 MENLTCATVKGSSVDMYFRRQVELSNMYRTMESNNYVTAEQAIQDVK-KGKLMAFIWDSS 746
Query: 598 YAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW- 656
+ + C T E F +G+G SP V+ IL E M++++ W
Sbjct: 747 RLEYEASKDCELVTAGE-LFGRSGYGVGLQKGSPWTDAVTLTILEFHESGFMEKLDKQWI 805
Query: 657 FKKH 660
F H
Sbjct: 806 FHGH 809
Score = 73 (30.8 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 27/99 (27%), Positives = 41/99 (41%)
Query: 217 QNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGARG--VGFWSPEKGXXX 273
++G +L Q L S G TG F D G + +++IN+ + VG +S +
Sbjct: 329 ESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREHQKQHLVGKFSYDS---- 384
Query: 274 XXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRV 312
IIW G P+G IPT+ K L +
Sbjct: 385 -LRAKMRMRINDSEIIWGGKQKRKPEGIMIPTHLKVLTI 422
Score = 72 (30.4 bits), Expect = 3.6e-12, Sum P(3) = 3.6e-12
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 48 IDTRVPYRSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKG 107
+D R ++ + + L + T Q+RV++++ IF A E + +G
Sbjct: 201 VDVRATVELIVEFEPKLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEG 260
Query: 108 CVWIMTD 114
VWI+T+
Sbjct: 261 HVWIVTE 267
>UNIPROTKB|H7BYG7 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 ProteinModelPortal:H7BYG7
SMR:H7BYG7 Ensembl:ENST00000389124 Bgee:H7BYG7 Uniprot:H7BYG7
Length = 871
Score = 193 (73.0 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 536
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 537 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 596
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 597 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 656
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 657 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 692
Score = 151 (58.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 65/268 (24%), Positives = 116/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 574 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 632
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 633 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 692
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 693 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVR--NSDEGIQRVLTT-DY 748
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 749 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 808
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ A +LG+ +
Sbjct: 809 MKEKWWRGNG-CPEEDNK-EASALGVEN 834
Score = 58 (25.5 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 27/109 (24%), Positives = 44/109 (40%)
Query: 153 RWKRKFLQENP----SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNAT 208
+W + LQ P L D + L YDA +A+A +A + VSS
Sbjct: 296 KWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRAS-------QLTVSS--L 346
Query: 209 DLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINV 255
+ GP+ + + R+ GLTG F +G + +II++
Sbjct: 347 QCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISL 395
Score = 42 (19.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 192 GITG-FGFDKTNVSSNATDLEAFGISQNG 219
G+TG F+KTN DL+ + + G
Sbjct: 371 GLTGHITFNKTNGLRKDFDLDIISLKEEG 399
>UNIPROTKB|F1LTY2 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 GeneTree:ENSGT00590000083056
IPI:IPI00231400 Ensembl:ENSRNOT00000042581 ArrayExpress:F1LTY2
Uniprot:F1LTY2
Length = 834
Score = 193 (73.0 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 440 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 499
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 500 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 559
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 560 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 619
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 620 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 655
Score = 153 (58.9 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 537 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 595
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 596 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 655
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 656 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVK--NSDEGIQRVLTT-DY 711
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 712 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 771
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ + A +LG+ +
Sbjct: 772 MKEKWWRGNG-CPEEDSK-EASALGVEN 797
Score = 57 (25.1 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 52/254 (20%), Positives = 93/254 (36%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ ++ + W+ +Y D+ G + L A + ++ R + P A D K
Sbjct: 121 AVLDLVLYYNWKTVTVVYEDST-GLIRLQELIKAPSRYNIKIKIRQL--PPANKDA--KP 175
Query: 71 LYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTD 129
L K +++ + I ++ +G+M + + T + LE
Sbjct: 176 LLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT-LDLFALDLE-LYRY 233
Query: 130 SMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSALA 185
S + G R + + +W + LQ P L D + L YDA +A
Sbjct: 234 SGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 293
Query: 186 VAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFR--GLTGDYIF--V 241
+A +A + VSS + GP+ + + R R GLTG F
Sbjct: 294 IASHRAS-------QLTVSS--LQCHRHKPWRLGPRFMNLIKEARARWDGLTGRITFNKT 344
Query: 242 DGQLQSSAFEIINV 255
DG + +II++
Sbjct: 345 DGLRKDFDLDIISL 358
>ZFIN|ZDB-GENE-061207-27 [details] [associations]
symbol:grin2bb "glutamate receptor, ionotropic,
N-methyl D-aspartate 2B, genome duplicate b" species:7955 "Danio
rerio" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-061207-27 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:BX537268 EMBL:BX901927
EMBL:BX901961 IPI:IPI00508048 ProteinModelPortal:F1RDX3
Ensembl:ENSDART00000092613 Bgee:F1RDX3 Uniprot:F1RDX3
Length = 1770
Score = 189 (71.6 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 52/211 (24%), Positives = 102/211 (48%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFN 398
G+ ID+ K + + + + V + +G++N ++ +V L VG TI
Sbjct: 538 GFCIDILKKIAKSVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTINEE 597
Query: 399 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFV-VWVL 457
RS +DF++P+ E+G+S++V + + + FL+P + D+WV + + V V+V
Sbjct: 598 RSEVIDFSVPFIETGISVMVS-RSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVF 656
Query: 458 EH-------RVNEDFRGPA--RHQVGTSFWFSFSTMVFSQRERVIS---NLARFVVIVWC 505
E+ R D R P +G + W + +VF+ V + ++ +V VW
Sbjct: 657 EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWA 715
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
F +I + SYTA+L + + ++ +T ++
Sbjct: 716 FFAVIFLASYTANLAAFMIQEEYVDQVTGLS 746
Score = 69 (29.3 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
D +I+ ++ KL Q+ V +L+ + IFE A+ +GL G WI+
Sbjct: 287 DSKIQNQMKKL---QSPVILLYCTKEEATTIFEVAHSVGLTGYGYTWIV 332
>UNIPROTKB|P39086 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0014054 "positive
regulation of gamma-aminobutyric acid secretion" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IDA] [GO:0051966 "regulation of
synaptic transmission, glutamatergic" evidence=TAS] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0007417 "central nervous system development"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0008144 GO:GO:0032229 GO:GO:0051967 GO:GO:0007268
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0030425 GO:GO:0048266 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0032230 GO:GO:0060080 GO:GO:0007417
GO:GO:0035249 DrugBank:DB00142 GO:GO:0030534 InterPro:IPR001828
GO:GO:0048172 DrugBank:DB00273 GO:GO:0051966 GO:GO:0016595
eggNOG:NOG316680 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:L19058
EMBL:U16125 EMBL:AJ249208 IPI:IPI00783047 IPI:IPI00937051
PIR:I58178 RefSeq:NP_000821.1 RefSeq:NP_783300.1 UniGene:Hs.664641
PDB:2ZNS PDB:2ZNT PDB:2ZNU PDB:3FUZ PDB:3FV1 PDB:3FV2 PDB:3FVG
PDB:3FVK PDB:3FVN PDB:3FVO PDBsum:2ZNS PDBsum:2ZNT PDBsum:2ZNU
PDBsum:3FUZ PDBsum:3FV1 PDBsum:3FV2 PDBsum:3FVG PDBsum:3FVK
PDBsum:3FVN PDBsum:3FVO ProteinModelPortal:P39086 SMR:P39086
STRING:P39086 PhosphoSite:P39086 DMDM:729597 PaxDb:P39086
PRIDE:P39086 DNASU:2897 Ensembl:ENST00000389125
Ensembl:ENST00000399907 GeneID:2897 KEGG:hsa:2897 UCSC:uc002ynn.3
UCSC:uc002yno.1 CTD:2897 GeneCards:GC21M030909 HGNC:HGNC:4579
MIM:138245 neXtProt:NX_P39086 PharmGKB:PA28973 KO:K05201
BindingDB:P39086 ChEMBL:CHEMBL1918 EvolutionaryTrace:P39086
GenomeRNAi:2897 NextBio:11463 ArrayExpress:P39086 Bgee:P39086
CleanEx:HS_GRIK1 Genevestigator:P39086 GermOnline:ENSG00000171189
GO:GO:0022843 Uniprot:P39086
Length = 918
Score = 193 (73.0 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 536
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 537 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 596
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 597 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 656
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 657 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 692
Score = 151 (58.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 65/268 (24%), Positives = 116/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 574 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 632
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 633 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 692
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 693 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVR--NSDEGIQRVLTT-DY 748
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 749 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 808
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ A +LG+ +
Sbjct: 809 MKEKWWRGNG-CPEEDNK-EASALGVEN 834
Score = 58 (25.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 27/109 (24%), Positives = 44/109 (40%)
Query: 153 RWKRKFLQENP----SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNAT 208
+W + LQ P L D + L YDA +A+A +A + VSS
Sbjct: 296 KWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRAS-------QLTVSS--L 346
Query: 209 DLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINV 255
+ GP+ + + R+ GLTG F +G + +II++
Sbjct: 347 QCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISL 395
Score = 42 (19.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 192 GITG-FGFDKTNVSSNATDLEAFGISQNG 219
G+TG F+KTN DL+ + + G
Sbjct: 371 GLTGHITFNKTNGLRKDFDLDIISLKEEG 399
>UNIPROTKB|E9PD61 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00792018
ProteinModelPortal:E9PD61 SMR:E9PD61 Ensembl:ENST00000399913
UCSC:uc011acs.2 ArrayExpress:E9PD61 Bgee:E9PD61 Uniprot:E9PD61
Length = 920
Score = 193 (73.0 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 536
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 537 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 596
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 597 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 656
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 657 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 692
Score = 151 (58.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 65/268 (24%), Positives = 116/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 574 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 632
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 633 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 692
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 693 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVR--NSDEGIQRVLTT-DY 748
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 749 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 808
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ A +LG+ +
Sbjct: 809 MKEKWWRGNG-CPEEDNK-EASALGVEN 834
Score = 58 (25.5 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 27/109 (24%), Positives = 44/109 (40%)
Query: 153 RWKRKFLQENP----SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNAT 208
+W + LQ P L D + L YDA +A+A +A + VSS
Sbjct: 296 KWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRAS-------QLTVSS--L 346
Query: 209 DLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINV 255
+ GP+ + + R+ GLTG F +G + +II++
Sbjct: 347 QCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISL 395
Score = 42 (19.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 192 GITG-FGFDKTNVSSNATDLEAFGISQNG 219
G+TG F+KTN DL+ + + G
Sbjct: 371 GLTGHITFNKTNGLRKDFDLDIISLKEEG 399
>UNIPROTKB|E7ENK3 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00790860
ProteinModelPortal:E7ENK3 SMR:E7ENK3 Ensembl:ENST00000327783
OMA:KELIDHR ArrayExpress:E7ENK3 Bgee:E7ENK3 Uniprot:E7ENK3
Length = 949
Score = 193 (73.0 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 536
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 537 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 596
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 597 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 656
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 657 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 692
Score = 154 (59.3 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 71/315 (22%), Positives = 127/315 (40%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 574 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 632
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 633 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 692
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 693 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVR--NSDEGIQRVLTT-DY 748
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 749 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 808
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNSFWXXXXXXXXXXXXXXXXXXXVFVHEHWNVLK 711
+++ W++ + CP+ A +LG+ + F+++
Sbjct: 809 MKEKWWRGNG-CPEEDNK-EASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKNND 866
Query: 712 NSESSLLSRIRIFLR 726
+ SRIR + R
Sbjct: 867 IEQKGKSSRIRFYFR 881
Score = 58 (25.5 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 27/109 (24%), Positives = 44/109 (40%)
Query: 153 RWKRKFLQENP----SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNAT 208
+W + LQ P L D + L YDA +A+A +A + VSS
Sbjct: 296 KWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRAS-------QLTVSS--L 346
Query: 209 DLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINV 255
+ GP+ + + R+ GLTG F +G + +II++
Sbjct: 347 QCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISL 395
Score = 42 (19.8 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 192 GITG-FGFDKTNVSSNATDLEAFGISQNG 219
G+TG F+KTN DL+ + + G
Sbjct: 371 GLTGHITFNKTNGLRKDFDLDIISLKEEG 399
>UNIPROTKB|F1M4T4 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00947926
ProteinModelPortal:F1M4T4 Ensembl:ENSRNOT00000065613
ArrayExpress:F1M4T4 Uniprot:F1M4T4
Length = 883
Score = 193 (73.0 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 440 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 499
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 500 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 559
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 560 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 619
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 620 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 655
Score = 153 (58.9 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 537 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 595
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 596 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 655
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 656 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVK--NSDEGIQRVLTT-DY 711
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 712 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 771
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ + A +LG+ +
Sbjct: 772 MKEKWWRGNG-CPEEDSK-EASALGVEN 797
Score = 57 (25.1 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 52/254 (20%), Positives = 93/254 (36%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ ++ + W+ +Y D+ G + L A + ++ R + P A D K
Sbjct: 121 AVLDLVLYYNWKTVTVVYEDST-GLIRLQELIKAPSRYNIKIKIRQL--PPANKDA--KP 175
Query: 71 LYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTD 129
L K +++ + I ++ +G+M + + T + LE
Sbjct: 176 LLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT-LDLFALDLE-LYRY 233
Query: 130 SMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSALA 185
S + G R + + +W + LQ P L D + L YDA +A
Sbjct: 234 SGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 293
Query: 186 VAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFR--GLTGDYIF--V 241
+A +A + VSS + GP+ + + R R GLTG F
Sbjct: 294 IASHRAS-------QLTVSS--LQCHRHKPWRLGPRFMNLIKEARARWDGLTGRITFNKT 344
Query: 242 DGQLQSSAFEIINV 255
DG + +II++
Sbjct: 345 DGLRKDFDLDIISL 358
>UNIPROTKB|Q5R1P3 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9615 "Canis lupus familiaris" [GO:0008270 "zinc ion
binding" evidence=ISS] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0048167 "regulation of synaptic plasticity"
evidence=IEA] [GO:0045471 "response to ethanol" evidence=IEA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008021
"synaptic vesicle" evidence=IEA] [GO:0007613 "memory" evidence=IEA]
[GO:0007612 "learning" evidence=IEA] [GO:0007423 "sensory organ
development" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0048167
GO:GO:0014069 GO:GO:0007423 GO:GO:0045471 GO:GO:0046872
GO:GO:0007613 GO:GO:0005262 GO:GO:0030054 GO:GO:0045211
GO:GO:0007612 GO:GO:0008021 GO:GO:0048266 GO:GO:0050966
GO:GO:0008270 GO:GO:0001701 GO:GO:0035235 GO:GO:0001967
GO:GO:0060079 GO:GO:0030288 GO:GO:0001662 InterPro:IPR001828
GO:GO:0001964 GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GO:GO:0004972 HOVERGEN:HBG052635 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 HOGENOM:HOG000113802
EMBL:AB195992 RefSeq:NP_001008719.1 UniGene:Cfa.16222 HSSP:Q00959
ProteinModelPortal:Q5R1P3 SMR:Q5R1P3 STRING:Q5R1P3 PRIDE:Q5R1P3
Ensembl:ENSCAFT00000020886 GeneID:494009 KEGG:cfa:494009 CTD:2904
InParanoid:Q5R1P3 KO:K05210 OrthoDB:EOG4Z8XVM NextBio:20865538
Uniprot:Q5R1P3
Length = 1485
Score = 190 (71.9 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 59/237 (24%), Positives = 110/237 (46%)
Query: 304 PTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPY 363
P + +R VP +K K +P + G+ ID+ K + + + + V
Sbjct: 424 PLSGTCMRNTVPCQKRIVSENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTN 483
Query: 364 AQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDS 423
+ +G++N +I +V + VG TI RS VDF++P+ E+G+S++V + +
Sbjct: 484 GKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVS-RSN 542
Query: 424 KKRNAWVFLQPLTWDLWVTSGCFFIFIGFV-VWVLEH-------RVNEDFRGPA--RHQV 473
+ FL+P + D+WV + + V V+V E+ R D R P +
Sbjct: 543 GTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTI 602
Query: 474 GTSFWFSFSTMVFSQRERVIS---NLARFVVIVWCFVVLILIQSYTASLTSLLTVDQ 527
G + W + +VF+ V + ++ +V VW F +I + SYTA+L + + ++
Sbjct: 603 GKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE 658
Score = 74 (31.1 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
D +I+ +L KL Q+ + +L+ + IFE AN +GL G WI+
Sbjct: 213 DSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIV 258
Score = 39 (18.8 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 751 PTEASPDSRYPASPSS 766
P+ A P ++YP SP++
Sbjct: 1273 PSNA-PSTKYPQSPTN 1287
Score = 37 (18.1 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 16/76 (21%), Positives = 30/76 (39%)
Query: 2 ALNDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVI--S 59
A+N++ IT I R+ + + +E I + D + A T P + S
Sbjct: 72 AMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDFISA-QTLTPILGIHGGS 130
Query: 60 PLATDDQIEKELYKLF 75
+ D+ E ++ F
Sbjct: 131 SMIMADKDESSMFFQF 146
>UNIPROTKB|F1M5R4 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00951831
Ensembl:ENSRNOT00000066006 ArrayExpress:F1M5R4 Uniprot:F1M5R4
Length = 912
Score = 193 (73.0 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 440 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 499
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 500 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 559
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 560 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 619
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 620 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 655
Score = 153 (58.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 537 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 595
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 596 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 655
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 656 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVK--NSDEGIQRVLTT-DY 711
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 712 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 771
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ + A +LG+ +
Sbjct: 772 MKEKWWRGNG-CPEEDSK-EASALGVEN 797
Score = 57 (25.1 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 52/254 (20%), Positives = 93/254 (36%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ ++ + W+ +Y D+ G + L A + ++ R + P A D K
Sbjct: 121 AVLDLVLYYNWKTVTVVYEDST-GLIRLQELIKAPSRYNIKIKIRQL--PPANKDA--KP 175
Query: 71 LYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTD 129
L K +++ + I ++ +G+M + + T + LE
Sbjct: 176 LLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT-LDLFALDLE-LYRY 233
Query: 130 SMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSALA 185
S + G R + + +W + LQ P L D + L YDA +A
Sbjct: 234 SGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 293
Query: 186 VAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFR--GLTGDYIF--V 241
+A +A + VSS + GP+ + + R R GLTG F
Sbjct: 294 IASHRAS-------QLTVSS--LQCHRHKPWRLGPRFMNLIKEARARWDGLTGRITFNKT 344
Query: 242 DGQLQSSAFEIINV 255
DG + +II++
Sbjct: 345 DGLRKDFDLDIISL 358
>UNIPROTKB|J9P2L9 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
InterPro:IPR018884 Pfam:PF10565 GeneTree:ENSGT00540000070221
OMA:CTNRSHL EMBL:AAEX03015244 Ensembl:ENSCAFT00000044471
Uniprot:J9P2L9
Length = 1513
Score = 190 (71.9 bits), Expect = 5.6e-12, Sum P(3) = 5.6e-12
Identities = 59/237 (24%), Positives = 110/237 (46%)
Query: 304 PTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPY 363
P + +R VP +K K +P + G+ ID+ K + + + + V
Sbjct: 452 PLSGTCMRNTVPCQKRIVSENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTN 511
Query: 364 AQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDS 423
+ +G++N +I +V + VG TI RS VDF++P+ E+G+S++V + +
Sbjct: 512 GKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVS-RSN 570
Query: 424 KKRNAWVFLQPLTWDLWVTSGCFFIFIGFV-VWVLEH-------RVNEDFRGPA--RHQV 473
+ FL+P + D+WV + + V V+V E+ R D R P +
Sbjct: 571 GTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTI 630
Query: 474 GTSFWFSFSTMVFSQRERVIS---NLARFVVIVWCFVVLILIQSYTASLTSLLTVDQ 527
G + W + +VF+ V + ++ +V VW F +I + SYTA+L + + ++
Sbjct: 631 GKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE 686
Score = 74 (31.1 bits), Expect = 5.6e-12, Sum P(3) = 5.6e-12
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 64 DDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
D +I+ +L KL Q+ + +L+ + IFE AN +GL G WI+
Sbjct: 213 DSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIV 258
Score = 39 (18.8 bits), Expect = 5.6e-12, Sum P(3) = 5.6e-12
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 751 PTEASPDSRYPASPSS 766
P+ A P ++YP SP++
Sbjct: 1301 PSNA-PSTKYPQSPTN 1315
Score = 37 (18.1 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 16/76 (21%), Positives = 30/76 (39%)
Query: 2 ALNDSSQVGAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVI--S 59
A+N++ IT I R+ + + +E I + D + A T P + S
Sbjct: 72 AMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDFISA-QTLTPILGIHGGS 130
Query: 60 PLATDDQIEKELYKLF 75
+ D+ E ++ F
Sbjct: 131 SMIMADKDESSMFFQF 146
>FB|FBgn0038840 [details] [associations]
symbol:CG5621 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0060025 "regulation of synaptic activity" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 EMBL:AE014297 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR001828
eggNOG:NOG316680 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0015277 RefSeq:NP_001036735.1 UniGene:Dm.31266
ProteinModelPortal:Q0KI38 SMR:Q0KI38 PRIDE:Q0KI38
EnsemblMetazoa:FBtr0110956 GeneID:42476 KEGG:dme:Dmel_CG5621
UCSC:CG5621-RB FlyBase:FBgn0038840 OMA:IEYITER OrthoDB:EOG4W6M9W
PhylomeDB:Q0KI38 GenomeRNAi:42476 NextBio:828990 Bgee:Q0KI38
Uniprot:Q0KI38
Length = 956
Score = 199 (75.1 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 89/419 (21%), Positives = 169/419 (40%)
Query: 164 SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLL 223
+L+++E F ++ T+++A+ + + + N A G L+
Sbjct: 283 ALYESE-EPFQNVSCPLTNSMALVYDGVQLLAETYKHVNFRPVALSCNDDSAWDKGYTLV 341
Query: 224 QALSSIRFRGLTGDYIF-VDGQLQSSAFEIINVN-NGARGVGFWSPEKGXXXXXXXXXXX 281
+ S+ GLTG F +G E+I + +G + +G WS E G
Sbjct: 342 NYMKSLTLNGLTGPIRFDYEGLRTDFKLEVIELAVSGMQKIGQWSGEDGFQEN------- 394
Query: 282 XXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYS 341
RP P S +P + N K V + + + +K T + G+
Sbjct: 395 ----RPA--PAHSL-EPDMRSL-VN-KSFVVITAISEPYG-MLKETSEKLEGNDQFEGFG 444
Query: 342 IDVFKAVIEELPYAVAYDFVPYAQPDGTS--SGSYNDLIYQVFLGEFDAVVGDTTIVFNR 399
I++ + ++L ++ + + G +G +N ++ ++ D + D T+ R
Sbjct: 445 IELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWNGMLREIIDSRADMGITDLTMTSER 504
Query: 400 SNYVDFTLPYTESGVSMIV--PIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVL 457
+ VDFT+P+ G+ ++ P+K+ K + F+ P + ++W+ G ++ + ++VL
Sbjct: 505 ESGVDFTIPFMSLGIGILFRKPMKEPPK--LFSFMSPFSGEVWLWLGLAYMGVSISMFVL 562
Query: 458 EHRVNEDFRGPA-----------RHQVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
++ P + WFS ++ E + R V W
Sbjct: 563 GRLSPAEWDNPYPCIEEPTELENQFSFANCLWFSIGALLQQGSELAPKAYSTRAVAASWW 622
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR--GDNVGYQKGSFVLGILKQLGF 562
F LIL+ SYTA+L + LTV+ L I D + L K G N G + G K+ +
Sbjct: 623 FFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGGVNYGAKIGGATFNFFKESNY 681
Score = 131 (51.2 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 50/213 (23%), Positives = 91/213 (42%)
Query: 478 WFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
WFS ++ E + R V W F LIL+ SYTA+L + LTV+ L I D +
Sbjct: 594 WFSIGALLQQGSELAPKAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDAD 653
Query: 537 LLIKR--GDNVGYQKGSFVLGILKQLGFDE-RKLVVY--NSHEECDELFQKG--SANGGI 589
L K G N G + G K+ + +++ + ++ + Q+G
Sbjct: 654 DLSKNKGGVNYGAKIGGATFNFFKESNYPTYQRMYEFMRDNPQYMTNTNQEGVDRVENSN 713
Query: 590 AAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKM 649
A E + + + C+ T V G+G A + P +S+A+L + E +
Sbjct: 714 YAFLMESTTIEYITERRCT-LTQVGALLDEKGYGIAMRKNWPYRDTLSQAVLEMQEQGLL 772
Query: 650 KEIEDAWFKKH---SSCPDAGTVVSARSLGLNS 679
+++ W+++ +C DA A +L +++
Sbjct: 773 TKMKTKWWQEKRGGGACSDADEDSGAVALEISN 805
Score = 65 (27.9 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 54/264 (20%), Positives = 101/264 (38%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVIS-PLATDDQIEK 69
A+ ++ A GW IY +Y +P++ + LQ T P +V L +
Sbjct: 146 ALRDMVVALGWESFTIIYESGEY----LPTVRELLQMYGTAGPTVTVRRYELDLNGNYRN 201
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTD 129
L ++ F++ + F++A ++GL+ +I+ + + + LEP
Sbjct: 202 VLRRIRNADDFSFVVVGSMATLPEFFKQAQQVGLVTSDYRYIIGNLDWHTM-DLEP-YQH 259
Query: 130 SMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP-SLFDAELNIFGLLAYDATSALAVAV 188
+ + G+R P ++ ++ K + E P L L YD LA
Sbjct: 260 AGTNITGLRLVSPDSEQVQEVA---KALYESEEPFQNVSCPLTNSMALVYDGVQLLAETY 316
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRG-LTGDYIFVDGQLQS 247
+ F +S N D A+ +++L+ G + DY +G
Sbjct: 317 KHVN-----FRPVALSCN--DDSAWDKGYTLVNYMKSLTLNGLTGPIRFDY---EGLRTD 366
Query: 248 SAFEIINVN-NGARGVGFWSPEKG 270
E+I + +G + +G WS E G
Sbjct: 367 FKLEVIELAVSGMQKIGQWSGEDG 390
>WB|WBGene00001618 [details] [associations]
symbol:glr-7 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0019915 GO:GO:0040039 KO:K05313 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 EMBL:FO080845 RefSeq:NP_508441.3
ProteinModelPortal:Q18591 SMR:Q18591 PaxDb:Q18591
EnsemblMetazoa:C43H6.9 GeneID:180547 KEGG:cel:CELE_C43H6.9
UCSC:C43H6.9 CTD:180547 WormBase:C43H6.9 eggNOG:NOG315397
HOGENOM:HOG000016613 InParanoid:Q18591 OMA:YENTAFQ NextBio:909824
ArrayExpress:Q18591 Uniprot:Q18591
Length = 671
Score = 196 (74.1 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 60/235 (25%), Positives = 108/235 (45%)
Query: 323 FVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGT-----SSGSYNDL 377
FV+ T DP +T GY ID+ + E V + + Y DG+ +G++N L
Sbjct: 170 FVQRTGDP---DTPYEGYCIDLINMIQVE----VNFTYTIYEVEDGSFGTMDDNGNWNGL 222
Query: 378 IYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTW 437
I + G D + +++ R N VDFT+PY + + I+ K + + + F++ L W
Sbjct: 223 IGALVSGSADIALAPLSVMAERENDVDFTVPYYDLVGTTILMKKADVEYSLFKFMKVLEW 282
Query: 438 DLWVTSGCFFIFIGFVVWVLEHRVNEDF-RGPARHQ---------VGTSFWFSFSTMVFS 487
+W+ ++F ++W+ + F R+Q + WF +++
Sbjct: 283 PVWLCIVAAYLFTSILLWIFDRFSPYSFTNNKERYQNDIEKRQFSLKECLWFCMTSLTPQ 342
Query: 488 QRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
N++ R V W I+I SYTA+L + LTV +L+ I+ ++ L K+
Sbjct: 343 GGGEAPKNISGRLVAATWWLFGFIIIASYTANLAAFLTVSRLEQPISSLDDLAKQ 397
>UNIPROTKB|B7Z4C0 [details] [associations]
symbol:GRIA3 "cDNA FLJ51894, highly similar to Glutamate
receptor 3" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 SMART:SM00918
Pfam:PF01094 GO:GO:0016020 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839 EMBL:AL356213
EMBL:AL035426 EMBL:AL590139 EMBL:Z83848 EMBL:Z82899
UniGene:Hs.377070 HGNC:HGNC:4573 ChiTaRS:GRIA3 EMBL:AK297136
IPI:IPI00921875 SMR:B7Z4C0 STRING:B7Z4C0 Ensembl:ENST00000541091
UCSC:uc011muf.1 Uniprot:B7Z4C0
Length = 662
Score = 124 (48.7 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 53/201 (26%), Positives = 85/201 (42%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G D V TI
Sbjct: 437 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 495
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIG--- 451
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 552
Query: 452 --FVV-------WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMVFSQRERVISN 495
F+V W LE NE+ R P ++ G S WFS F Q+ IS
Sbjct: 553 VLFLVSRFSPYEWHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGA--FMQQGCDIS- 608
Query: 496 LARFVVIVWCFVVLILIQSYT 516
RFV + + IL SY+
Sbjct: 609 -PRFVFVAYSMPHCIL-WSYS 627
Score = 123 (48.4 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 53/260 (20%), Positives = 116/260 (44%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 131 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 188
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V
Sbjct: 189 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 245
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
+ G + + ++ F RW R +E P +A L L +DA +A A
Sbjct: 246 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 305
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-VDGQLQS 247
+ + + A SQ G + +AL ++ +G+TG+ F G+ +
Sbjct: 306 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 364
Query: 248 SAFEIINVN-NGARGVGFWS 266
++ + +G+R G+W+
Sbjct: 365 YTIDVYEMKVSGSRKAGYWN 384
>UNIPROTKB|F1M7M9 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0030534
"adult behavior" evidence=IEA] [GO:0032230 "positive regulation of
synaptic transmission, GABAergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732
GO:GO:0051967 GO:GO:0014054 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0048266 GO:GO:0035235 GO:GO:0060079
GO:GO:0042734 GO:GO:0032230 GO:GO:0060080 GO:GO:0035249
GO:GO:0030534 InterPro:IPR001828 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 IPI:IPI00231402 GeneTree:ENSGT00590000083056
OMA:KELIDHR ProteinModelPortal:F1M7M9 Ensembl:ENSRNOT00000050073
ArrayExpress:F1M7M9 Uniprot:F1M7M9
Length = 951
Score = 193 (73.0 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 479 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 538
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 539 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 598
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 599 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 658
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 659 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 694
Score = 153 (58.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 576 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 634
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 635 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 694
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 695 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVK--NSDEGIQRVLTT-DY 750
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 751 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 810
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ + A +LG+ +
Sbjct: 811 MKEKWWRGNG-CPEEDSK-EASALGVEN 836
Score = 55 (24.4 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 51/254 (20%), Positives = 95/254 (37%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKE 70
A+ ++ + W+ +Y D+ G + L A + ++ R + P A D K
Sbjct: 160 AVLDLVLYYNWKTVTVVYEDST-GLIRLQELIKAPSRYNIKIKIRQL--PPANKDA--KP 214
Query: 71 LYKLFTMQTRVFILHMLP-SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTD 129
L K +++ + I ++ +G+M + + T + LE
Sbjct: 215 LLKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTT-LDLFALDLE-LYRY 272
Query: 130 SMQGVIGVRPYVPKTKALENFRVRWKRKFLQENP----SLFDAELNIFGLLAYDATSALA 185
S + G R + + +W + LQ P L D + L YDA +A
Sbjct: 273 SGVNMTGFRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 332
Query: 186 VAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQAL--SSIRFRGLTGDYIF--V 241
+A +A + VSS + GP+ + + ++ R+ GLTG F
Sbjct: 333 IASHRAS-------QLTVSS--LQCHRHKPWRLGPRFMNLIKEATARWDGLTGRITFNKT 383
Query: 242 DGQLQSSAFEIINV 255
DG + +II++
Sbjct: 384 DGLRKDFDLDIISL 397
>UNIPROTKB|F6QCU7 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:DAAA02000152 EMBL:DAAA02000153
EMBL:DAAA02000154 EMBL:DAAA02000155 EMBL:DAAA02000156
EMBL:DAAA02000157 IPI:IPI00711099 Ensembl:ENSBTAT00000026817
Uniprot:F6QCU7
Length = 797
Score = 186 (70.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 56/216 (25%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + V + + G +N ++ ++ + D V TI +
Sbjct: 353 GYCLDLLKELSNILGFIYDVKLVADGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITY 412
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 413 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 472
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 473 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 532
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 533 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 568
Score = 58 (25.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 27/109 (24%), Positives = 44/109 (40%)
Query: 153 RWKRKFLQENP----SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNAT 208
+W + LQ P L D + L YDA +A+A +A + VSS
Sbjct: 225 KWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRAS-------QLTVSS--L 275
Query: 209 DLEAFGISQNGPKLLQALSSIRFRGLTGDYIF--VDGQLQSSAFEIINV 255
+ GP+ + + ++ GLTG F DG + +II++
Sbjct: 276 QCHRHKPWRLGPRFMNLIKEAQWDGLTGRITFNKTDGLRKDFDLDIISL 324
>ZFIN|ZDB-GENE-060809-5 [details] [associations]
symbol:si:ch211-251b21.1 "si:ch211-251b21.1"
species:7955 "Danio rerio" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 ZFIN:ZDB-GENE-060809-5 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG241927
GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371
HOVERGEN:HBG104989 OrthoDB:EOG43FGX0 EMBL:CU499311 IPI:IPI00482094
RefSeq:NP_001138274.1 UniGene:Dr.3211 Ensembl:ENSDART00000008778
Ensembl:ENSDART00000139096 GeneID:571720 KEGG:dre:571720
OMA:QEGNFAF NextBio:20890667 Uniprot:B8JLR6
Length = 458
Score = 188 (71.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 79/345 (22%), Positives = 145/345 (42%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
G+ ID+ A+ +L + V Y + D SG++N +I +V GE D V T+
Sbjct: 45 GFCIDMLSAISNKLGFKYDVHLVKDGRYGKTD--DSGNWNGMIGEVVRGEADIAVAPLTL 102
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKD--SKKRNAWVFLQPLTWDLWVTSGCFFIFIGFV 453
R VD + P+ ++G+S I+ KD S L+ + ++W+ ++
Sbjct: 103 TAQREAVVDMSKPFMQTGLSFIMR-KDLGSDDSQFLSLLKLFSTEMWMGVLVAYLLTSIC 161
Query: 454 VWVLEHRVNE-DFRGPARHQ----VGTSFWFSFSTMVFS---QRERVISNLARFVVIVWC 505
++++ R++ ++ P + + SFW++ + + +S R + +W
Sbjct: 162 IFLVS-RISPCEWEQPEKDNNSFTLSHSFWYTVGALTLQGAGPHPKALSG--RVITSIWW 218
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTI-TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDE 564
L+L+ Y A+L+ L D Q +I T +L + G K S K +
Sbjct: 219 IFSLVLLACYFANLSLWLHSDNQQLSIKTFEDLANQNVIEYGTIKDSSSFNFFKNSN-NP 277
Query: 565 RKLVVYNSHEECDELFQKGSANG------GIAAAFDEIPYAKLLIGQHCSKYTMVEPTFK 618
+Y +E + +A G G A E L + ++C+ T
Sbjct: 278 TYHRIYEHIKEAQS-YSLNAAEGFRRAQKGNYAFIGESVSLDLAVARYCN-LTRAPEIIG 335
Query: 619 TAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC 663
G+ A PL SPL+ ++S AIL ++E ++ W+ SSC
Sbjct: 336 MRGYSIAAPLGSPLIKNLSVAILRLSESGELDYFRSKWWA--SSC 378
>UNIPROTKB|F1NY64 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02016515 EMBL:AADN02016516 EMBL:AADN02016517
EMBL:AADN02016518 EMBL:AADN02016519 IPI:IPI00821646
Ensembl:ENSGALT00000015322 ArrayExpress:F1NY64 Uniprot:F1NY64
Length = 878
Score = 192 (72.6 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 104/448 (23%), Positives = 177/448 (39%)
Query: 147 LENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSN 206
+ F RW +E P + + L YDA + A + + +
Sbjct: 265 VSKFIQRWSTLEEKEYPGAHTSTIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGD 324
Query: 207 ATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVDGQLQSSAFEIINVNNGARGVGFWS 266
A +G ++ +AL ++ GLTG+ F D + F I NV + G
Sbjct: 325 CLANPAVPWG-HGVEIERALKQVQVEGLTGNIKF-DQNGKRINFTI-NVME-LKSTG--- 377
Query: 267 PEKGXXXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKV 326
P K + ++ P D P G E E K + + + +K
Sbjct: 378 PRK--------IGYWSEVDKMVVNPLDG---PLGNESSGLENKTIIVTTILESPYVMMKK 426
Query: 327 TIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFL 383
+ GY +D+ + + + V Y D + +N ++ ++
Sbjct: 427 NHEMLEGNDRYEGYCVDLATEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVY 485
Query: 384 GEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTS 443
G+ D + TI R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 486 GKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM-- 543
Query: 444 GCF-FIFIGF-VVWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVF 486
C F +IG VV L R + E+F + ++ G S WFS F
Sbjct: 544 -CIVFAYIGVSVVLFLVSRFSPYEWHTEEFEDGRETQTNESTNEFGIFNSLWFSLGA--F 600
Query: 487 SQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD 543
Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I L K+ +
Sbjct: 601 MQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 660
Query: 544 NVGYQKGSFVLGILKQLGFDERKLVVYN 571
+ Y G+ G K+ F K+ V++
Sbjct: 661 -IAY--GTLDSGSTKEF-FRRSKIAVFD 684
Score = 146 (56.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 64/222 (28%), Positives = 105/222 (47%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 592 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 649
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V++ ++ + E +F + +A G
Sbjct: 650 ESAEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMKSAEPSVFVRTTAEG 705
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ YA LL I Q TM V + G+G A P S L V+ A
Sbjct: 706 VARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLA 765
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSC--PDAGTVVSARSLGLNS 679
+L ++E + ++++ W+ C D+G+ +L L++
Sbjct: 766 VLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 807
>UNIPROTKB|F1NKF1 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:HAVPYVS EMBL:AADN02016515 EMBL:AADN02016516 EMBL:AADN02016517
EMBL:AADN02016518 EMBL:AADN02016519 IPI:IPI00603883
ProteinModelPortal:F1NKF1 Ensembl:ENSGALT00000038841
ArrayExpress:F1NKF1 Uniprot:F1NKF1
Length = 883
Score = 192 (72.6 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 104/448 (23%), Positives = 177/448 (39%)
Query: 147 LENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSN 206
+ F RW +E P + + L YDA + A + + +
Sbjct: 270 VSKFIQRWSTLEEKEYPGAHTSTIKYTSALTYDAVQVMTEAFRNLRKQRIEISRRGNAGD 329
Query: 207 ATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVDGQLQSSAFEIINVNNGARGVGFWS 266
A +G ++ +AL ++ GLTG+ F D + F I NV + G
Sbjct: 330 CLANPAVPWG-HGVEIERALKQVQVEGLTGNIKF-DQNGKRINFTI-NVME-LKSTG--- 382
Query: 267 PEKGXXXXXXXXXXXXXXXRPIIWPGDSTSDPKGWEIPTNEKKLRVGVPVKKGFSDFVKV 326
P K + ++ P D P G E E K + + + +K
Sbjct: 383 PRK--------IGYWSEVDKMVVNPLDG---PLGNESSGLENKTIIVTTILESPYVMMKK 431
Query: 327 TIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFL 383
+ GY +D+ + + + V Y D + +N ++ ++
Sbjct: 432 NHEMLEGNDRYEGYCVDLATEIAKHCGFKYKLTIVGDGKYGARDADTK-IWNGMVGELVY 490
Query: 384 GEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTS 443
G+ D + TI R +DF+ P+ G+S+++ K + FL PL +++W+
Sbjct: 491 GKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM-- 548
Query: 444 GCF-FIFIGF-VVWVLEHRVN------EDFR-------GPARHQVG--TSFWFSFSTMVF 486
C F +IG VV L R + E+F + ++ G S WFS F
Sbjct: 549 -CIVFAYIGVSVVLFLVSRFSPYEWHTEEFEDGRETQTNESTNEFGIFNSLWFSLGA--F 605
Query: 487 SQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD 543
Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I L K+ +
Sbjct: 606 MQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 665
Query: 544 NVGYQKGSFVLGILKQLGFDERKLVVYN 571
+ Y G+ G K+ F K+ V++
Sbjct: 666 -IAY--GTLDSGSTKEF-FRRSKIAVFD 689
Score = 146 (56.5 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 64/222 (28%), Positives = 105/222 (47%)
Query: 476 SFWFSFSTMVFSQRERVIS--NLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
S WFS F Q+ IS +L+ R V VW F LI+I SYTA+L + LTV+++ I
Sbjct: 597 SLWFSLGA--FMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPI 654
Query: 533 TDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYN---SHEECDE--LFQKGSANG 587
L K+ + + Y G+ G K+ F K+ V++ ++ + E +F + +A G
Sbjct: 655 ESAEDLSKQTE-IAY--GTLDSGSTKEF-FRRSKIAVFDKMWTYMKSAEPSVFVRTTAEG 710
Query: 588 GIAAAFDEIPYAKLL-------IGQHCSKYTM-VEPTFKTAGFGFAFPLHSPLVHDVSKA 639
+ YA LL I Q TM V + G+G A P S L V+ A
Sbjct: 711 VARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLA 770
Query: 640 ILNVTEGDKMKEIEDAWFKKHSSC--PDAGTVVSARSLGLNS 679
+L ++E + ++++ W+ C D+G+ +L L++
Sbjct: 771 VLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSN 812
>UNIPROTKB|F8W7X3 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI01010383
ProteinModelPortal:F8W7X3 SMR:F8W7X3 PRIDE:F8W7X3
Ensembl:ENST00000309434 PhylomeDB:F8W7X3 ArrayExpress:F8W7X3
Bgee:F8W7X3 Uniprot:F8W7X3
Length = 920
Score = 193 (73.0 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 479 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 538
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 539 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 598
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 599 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 658
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 659 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 694
Score = 151 (58.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 65/268 (24%), Positives = 116/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 576 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 634
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 635 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 694
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 695 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVR--NSDEGIQRVLTT-DY 750
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 751 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 810
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ A +LG+ +
Sbjct: 811 MKEKWWRGNG-CPEEDNK-EASALGVEN 836
Score = 49 (22.3 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 27/111 (24%), Positives = 46/111 (41%)
Query: 153 RWKRKFLQENP----SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNAT 208
+W + LQ P L D + L YDA +A+A +A + VSS
Sbjct: 296 KWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRAS-------QLTVSS--L 346
Query: 209 DLEAFGISQNGPKLLQAL--SSIRFRGLTGDYIF--VDGQLQSSAFEIINV 255
+ GP+ + + ++ R+ GLTG F +G + +II++
Sbjct: 347 QCHRHKPWRLGPRFMNLIKEATARWDGLTGHITFNKTNGLRKDFDLDIISL 397
Score = 42 (19.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 192 GITG-FGFDKTNVSSNATDLEAFGISQNG 219
G+TG F+KTN DL+ + + G
Sbjct: 373 GLTGHITFNKTNGLRKDFDLDIISLKEEG 401
>UNIPROTKB|F5H1W5 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI01013593
ProteinModelPortal:F5H1W5 SMR:F5H1W5 Ensembl:ENST00000535441
ArrayExpress:F5H1W5 Bgee:F5H1W5 Uniprot:F5H1W5
Length = 922
Score = 193 (73.0 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 57/216 (26%), Positives = 98/216 (45%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + VP + + G +N ++ ++ D V TI +
Sbjct: 479 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITY 538
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PL+ D+W V C + + FV+
Sbjct: 539 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVI 598
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N D + + SFWF ++ E + L+ R V +W
Sbjct: 599 ARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWW 658
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 659 FFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 694
Score = 151 (58.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 65/268 (24%), Positives = 116/268 (43%)
Query: 432 LQPLTWDLWVTSGCFFIF-IGFVV-------WVLEHRVNEDFRGPARH-QVGTSFWFSFS 482
L P W ++V C + + FV+ W H N D + + SFWF
Sbjct: 576 LSPDIW-MYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVG 634
Query: 483 TMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
++ E + L+ R V +W F LI+I SYTA+L + LTV++++ I + L K+
Sbjct: 635 ALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQ 694
Query: 542 GDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPY 598
+ Y + GS + K K+ + S + L + +++ GI Y
Sbjct: 695 -TKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALVR--NSDEGIQRVLTT-DY 750
Query: 599 AKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKE 651
A L+ + Q T + + G+G P+ SP ++ AIL + E K+
Sbjct: 751 ALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHM 810
Query: 652 IEDAWFKKHSSCPDAGTVVSARSLGLNS 679
+++ W++ + CP+ A +LG+ +
Sbjct: 811 MKEKWWRGNG-CPEEDNK-EASALGVEN 836
Score = 49 (22.3 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 27/111 (24%), Positives = 46/111 (41%)
Query: 153 RWKRKFLQENP----SLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNAT 208
+W + LQ P L D + L YDA +A+A +A + VSS
Sbjct: 296 KWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVAIASHRAS-------QLTVSS--L 346
Query: 209 DLEAFGISQNGPKLLQAL--SSIRFRGLTGDYIF--VDGQLQSSAFEIINV 255
+ GP+ + + ++ R+ GLTG F +G + +II++
Sbjct: 347 QCHRHKPWRLGPRFMNLIKEATARWDGLTGHITFNKTNGLRKDFDLDIISL 397
Score = 42 (19.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 192 GITG-FGFDKTNVSSNATDLEAFGISQNG 219
G+TG F+KTN DL+ + + G
Sbjct: 373 GLTGHITFNKTNGLRKDFDLDIISLKEEG 401
>UNIPROTKB|F1P6H3 [details] [associations]
symbol:GRIN2D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00540000070221 OMA:ARCGCPR
EMBL:AAEX03000823 Ensembl:ENSCAFT00000006426 Uniprot:F1P6H3
Length = 1126
Score = 191 (72.3 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 52/221 (23%), Positives = 106/221 (47%)
Query: 330 PKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAV 389
P+ ++ G+ ID+ K + + + ++ V + G +N +I +VF D
Sbjct: 266 PRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMA 325
Query: 390 VGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSG--CFF 447
+G TI RS VDF++P+ E+G+S++V + + + FL+P + +WV C
Sbjct: 326 IGSLTINEERSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPAVWVMMFVMCLT 384
Query: 448 IFIGFVVWVLEHR----VNEDFR-----GPARHQVGTSFWFSFSTMVFSQR---ERVISN 495
+ + V++ E+ N G + +G S W ++ +VF+ E
Sbjct: 385 V-VAVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWA-LVFNNSVPVENPRGT 442
Query: 496 LARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
++ +V+VW F +I + SYTA+L + + ++ T++ ++
Sbjct: 443 TSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGLS 483
Score = 49 (22.3 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 73 KLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
+L ++ ++ +L +F A E GL G VW M
Sbjct: 24 QLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVWFM 63
Score = 48 (22.0 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 617 FKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW 656
F T G+G A S + A+L D+++ +E W
Sbjct: 573 FATTGYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLW 612
Score = 38 (18.4 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 187 AVEKAGITGFGF 198
A E+AG+TG G+
Sbjct: 48 AAEEAGLTGPGY 59
>UNIPROTKB|K7GPI4 [details] [associations]
symbol:LOC100519996 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
SMART:SM00918 Pfam:PF01094 InterPro:IPR001828
GeneTree:ENSGT00590000082809 EMBL:CU210872 EMBL:CU469331
EMBL:CU856192 Ensembl:ENSSSCT00000032933 Ensembl:ENSSSCT00000036560
Uniprot:K7GPI4
Length = 625
Score = 122 (48.0 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 53/260 (20%), Positives = 115/260 (44%)
Query: 10 GAITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEK 69
GAI +++ + W + V +Y D + G ++ ++ +A + +V RSV + + +
Sbjct: 147 GAILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSV-GNIKDVQEFRR 204
Query: 70 ELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTD-GMTNLLRTLEPSVT 128
+ ++ Q + +++ + I E+ +G ++G +++ + G T++L LE V
Sbjct: 205 IIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LE-RVM 261
Query: 129 DSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAV 188
+ G + + ++ F RW R +E P +A L L +DA +A A
Sbjct: 262 HGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVIAEAF 321
Query: 189 EKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF-VDGQLQS 247
+ + + A SQ G + +AL ++ +G+TG+ F G+ +
Sbjct: 322 RYLRRQRVDVSRRGSAGDCLANPAVPWSQ-GIDIERALKMVQVQGMTGNIQFDTYGRRTN 380
Query: 248 SAFEIINVN-NGARGVGFWS 266
++ + G+R G+W+
Sbjct: 381 YTIDVYEMKVTGSRKAGYWN 400
Score = 116 (45.9 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 42/170 (24%), Positives = 71/170 (41%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFV---PYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
GY +D+ + + + V Y D + +N ++ ++ G D V TI
Sbjct: 453 GYCVDLAYEIAKHVRIKYKLSIVGDGKYGARDPETK-IWNGMVGELVYGRADIAVAPLTI 511
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCF-FIFIG--- 451
R +DF+ P+ G+S+++ K + FL PL +++W+ C F +IG
Sbjct: 512 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM---CIVFAYIGVSV 568
Query: 452 --FVV-------WVLEHRVNEDFRGPAR-----HQVG--TSFWFSFSTMV 485
F+V W LE NE+ R P ++ G S WFS +
Sbjct: 569 VLFLVSRFSPYEWHLEDN-NEEPRDPQSPPDPPNEFGIFNSLWFSLGAFM 617
>ZFIN|ZDB-GENE-030131-6502 [details] [associations]
symbol:grik1a "glutamate receptor, ionotropic,
kainate 1a" species:7955 "Danio rerio" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030131-6502 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 KO:K05201
GeneTree:ENSGT00590000083056 EMBL:AL837524 EMBL:CT573197
EMBL:AL954816 IPI:IPI00611951 RefSeq:XP_001924038.3
UniGene:Dr.14817 UniGene:Dr.155893 ProteinModelPortal:E9QGN5
Ensembl:ENSDART00000147089 GeneID:798001 KEGG:dre:798001 CTD:798001
NextBio:20933239 ArrayExpress:E9QGN5 Bgee:E9QGN5 Uniprot:E9QGN5
Length = 904
Score = 174 (66.3 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 54/216 (25%), Positives = 95/216 (43%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSS-GSYNDLIYQVFLGEFDAVVGDTTIVF 397
GY +D+ K + L + V + + G +N ++ ++ D V TI +
Sbjct: 462 GYCLDLLKELSNILGFTYEVKLVTDGKYGAQNDKGEWNGMVRELIDHIADLAVAPLTITY 521
Query: 398 NRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLW--VTSGCFFIF-IGFVV 454
R +DF+ P+ G+S++ + + FL PLT D+W V C + + FV+
Sbjct: 522 VREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLTPDIWMYVLLACLGVSCVLFVI 581
Query: 455 -------WVLEHRVNEDFRGPARH-QVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWC 505
W H N + + S WF + ++ E + L+ R + +W
Sbjct: 582 ARFTPYEWYNPHPCNPSSEVVENNFTLLNSLWFGVAALMRQGSELMPKALSTRILGGIWW 641
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKR 541
F LI+I SYTA+L + LTV+++ I + L K+
Sbjct: 642 FFTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQ 677
Score = 143 (55.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 55/215 (25%), Positives = 97/215 (45%)
Query: 476 SFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
S WF + ++ E + L+ R + +W F LI+I SYTA+L + LTV+++ I
Sbjct: 611 SLWFGVAALMRQGSELMPKALSTRILGGIWWFFTLIIISSYTANLAAFLTVERMDSPIDS 670
Query: 535 VNLLIKRGDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAA 591
+ L K+ + Y + GS + K K+ + S + L + ++ GI
Sbjct: 671 ADDLAKQ-TRIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRKNTALVK--NSKDGITR 727
Query: 592 AFDEIPYAKLL-------IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVT 644
YA L+ I Q T V + G+G P+ SP V+ AIL +
Sbjct: 728 VLTT-DYALLMESTSIEYITQRNCNLTQVGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQ 786
Query: 645 EGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
E K+ +++ W++ + CP+ + A +LG+ +
Sbjct: 787 EEGKLHMMKEKWWRGNG-CPEEDSK-EASALGVEN 819
Score = 66 (28.3 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 52/273 (19%), Positives = 104/273 (38%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVIS------PLATD 64
AI I+ + W+ +Y D+ G + L A + ++ R + S PL +
Sbjct: 162 AILDIVIFYKWKCVTVVYEDST-GLMRMQELIKAPSKNNLKIRIRQLPSGGGDSRPLLKE 220
Query: 65 DQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLE 124
+ EKE Y +F +V + + ++ +G+M + + T + LE
Sbjct: 221 MKKEKEFYVIFDCSYQV---------AAELLKQLMSMGMMTEYYHFFFTT-LDLFALDLE 270
Query: 125 PSVTDSMQGVIGVRPYVPKTKALENFRVRW--KRKFLQENPS--LFDAELNIFGLLAYDA 180
P + + R + + +W +R+ P L + L YDA
Sbjct: 271 PYRYSGVN-MTAFRLLNLDDSYVASVIQKWSMERQLAPPKPESGLMSGIMTTAAALMYDA 329
Query: 181 TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
+AVA ++A T ++ ++ + GP+ + ++ GLTG +
Sbjct: 330 VFMVAVASQRA---------TQMTVSSLQCHRHKPWRYGPRFMNLFKEAQWDGLTGRIVL 380
Query: 241 --VDGQLQSSAFEIINVN-NGARGVGFWSPEKG 270
DG + ++I++ +G +G W+ G
Sbjct: 381 NKTDGLRKEFNLDLISLKEDGTAKIGVWNSYTG 413
>UNIPROTKB|F1MR40 [details] [associations]
symbol:F1MR40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051930 "regulation of sensory perception of pain"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0051930 GO:GO:0030054 GO:GO:0045211 GO:GO:0008344
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964
GO:GO:0005234 GO:GO:0004972 GeneTree:ENSGT00540000070221
OMA:ARCGCPR EMBL:DAAA02047449 EMBL:DAAA02047450 EMBL:DAAA02047451
IPI:IPI00838975 Ensembl:ENSBTAT00000042550 Uniprot:F1MR40
Length = 993
Score = 191 (72.3 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 52/221 (23%), Positives = 106/221 (47%)
Query: 330 PKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAV 389
P+ ++ G+ ID+ K + + + ++ V + G +N +I +VF D
Sbjct: 475 PRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMA 534
Query: 390 VGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSG--CFF 447
+G TI RS VDF++P+ E+G+S++V + + + FL+P + +WV C
Sbjct: 535 IGSLTINEERSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPAVWVMMFVMCLT 593
Query: 448 IFIGFVVWVLEHR----VNEDFR-----GPARHQVGTSFWFSFSTMVFSQR---ERVISN 495
+ + V++ E+ N G + +G S W ++ +VF+ E
Sbjct: 594 V-VAVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWA-LVFNNSVPVENPRGT 651
Query: 496 LARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
++ +V+VW F +I + SYTA+L + + ++ T++ ++
Sbjct: 652 TSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGLS 692
Score = 49 (22.3 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 73 KLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
+L ++ ++ +L +F A E GL G VW M
Sbjct: 233 QLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVWFM 272
Score = 38 (18.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 187 AVEKAGITGFGF 198
A E+AG+TG G+
Sbjct: 257 AAEEAGLTGPGY 268
>WB|WBGene00001617 [details] [associations]
symbol:glr-6 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0009792 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 InterPro:IPR001828 KO:K05313 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 HSSP:P19491
EMBL:FO080933 GeneID:180955 KEGG:cel:CELE_F41B4.4 UCSC:F41B4.4a
CTD:180955 NextBio:911722 RefSeq:NP_741822.2
ProteinModelPortal:Q8MXV8 SMR:Q8MXV8 DIP:DIP-24287N
EnsemblMetazoa:F41B4.4a WormBase:F41B4.4a HOGENOM:HOG000019343
InParanoid:Q8MXV8 OMA:IVPRINE ArrayExpress:Q8MXV8 Uniprot:Q8MXV8
Length = 844
Score = 187 (70.9 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 82/364 (22%), Positives = 152/364 (41%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQ-PDGTSSGSYNDLIYQVFLGEFDAVVGDTT 394
G+ +D+ + E L + V Y + +GT ++ +I ++ G+ D V T
Sbjct: 436 GFCVDLLDKLAEMLHFNYTLKIVKDNKYGERKNGTDE--WDGMIGEILRGDADMAVAPIT 493
Query: 395 IVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWV-FLQPLTWDLWVTSGCFFIFIGFV 453
+ R +DFT P+ + G+SM++ + K ++ FL PL+ +W S + +
Sbjct: 494 VTATRLEVIDFTDPFLQLGISMLMRQPNPKSSSSLTRFLWPLSASVWTFSAIATVITALL 553
Query: 454 VWVLEHRVNEDFRGPARHQVGTSFWFSFSTMVFS-QRERVISNLARFVVIVWCFVVLILI 512
V V V A ++ S W+ ++ + + R + VW L+LI
Sbjct: 554 VTVAA--VLSPKESTAEFKIQNSVWYLVCILLRAGSGYNCQAGATRLISAVWWSFTLVLI 611
Query: 513 QSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNS 572
YTA+ +LLTVD+ L G+ Y GS + G Q F ++ +
Sbjct: 612 AQYTANFAALLTVDRKSMPFNSFEEL---GNQTEYNFGSILGGSTMQF-FKYSRIETFRR 667
Query: 573 HEECDELFQK----GSANGGIAAAFDEIPYAKLL--------IGQHCSKYTMVEPTFKTA 620
E + + G+ + G+ +E Y L+ + Q+C+ + +
Sbjct: 668 LWERMQSAEPSAFVGTNHEGVNRVLNE-KYVFLMESATLDYQVTQNCNLTRVGNVVLGSN 726
Query: 621 GFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKK-----HSSCP-DAGTVVSARS 674
G+ A P S +++ IL++ E + +++ W+KK SS P D T + A +
Sbjct: 727 GYSIALPKGSKWREKLTRQILDLNEKGIILMLKNNWWKKSQQECQSSEPEDLQTALGAEN 786
Query: 675 L-GL 677
+ GL
Sbjct: 787 VYGL 790
>UNIPROTKB|F1RL86 [details] [associations]
symbol:GRIN2D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051930 "regulation of sensory perception of pain"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0051930 GO:GO:0030054 GO:GO:0045211 GO:GO:0008344
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964
GO:GO:0005234 GO:GO:0004972 GeneTree:ENSGT00540000070221
OMA:ARCGCPR EMBL:FP102301 Ensembl:ENSSSCT00000003474 Uniprot:F1RL86
Length = 1328
Score = 191 (72.3 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 52/221 (23%), Positives = 106/221 (47%)
Query: 330 PKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAV 389
P+ ++ G+ ID+ K + + + ++ V + G +N +I +VF D
Sbjct: 477 PRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMA 536
Query: 390 VGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSG--CFF 447
+G TI RS VDF++P+ E+G+S++V + + + FL+P + +WV C
Sbjct: 537 IGSLTINEERSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPAVWVMMFVMCLT 595
Query: 448 IFIGFVVWVLEHR----VNEDFR-----GPARHQVGTSFWFSFSTMVFSQR---ERVISN 495
+ + V++ E+ N G + +G S W ++ +VF+ E
Sbjct: 596 V-VAVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWA-LVFNNSVPVENPRGT 653
Query: 496 LARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
++ +V+VW F +I + SYTA+L + + ++ T++ ++
Sbjct: 654 TSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGLS 694
Score = 49 (22.3 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 73 KLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
+L ++ ++ +L +F A E GL G VW M
Sbjct: 235 QLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVWFM 274
Score = 48 (22.0 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 617 FKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW 656
F T G+G A S + A+L D+++ +E W
Sbjct: 784 FATTGYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLW 823
Score = 38 (18.4 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 187 AVEKAGITGFGF 198
A E+AG+TG G+
Sbjct: 259 AAEEAGLTGPGY 270
>UNIPROTKB|P19439 [details] [associations]
symbol:KBP "Probable glutamate receptor" species:9031
"Gallus gallus" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GO:GO:0005234 GO:GO:0004970 EMBL:X17700 IPI:IPI00597968 PIR:S07062
RefSeq:NP_990684.1 UniGene:Gga.42516 ProteinModelPortal:P19439
Ensembl:ENSGALT00000001776 GeneID:396300 KEGG:gga:396300
CTD:100002194 eggNOG:NOG241927 GeneTree:ENSGT00700000104113
HOGENOM:HOG000234371 HOVERGEN:HBG104989 InParanoid:P19439
OMA:YLRSKWW OrthoDB:EOG43FGX0 NextBio:20816350 Uniprot:P19439
Length = 487
Score = 182 (69.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 80/355 (22%), Positives = 144/355 (40%)
Query: 329 DP--KTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGTS-SGSYNDLIYQVFLGE 385
DP + + GY ID+ KA+ L ++ V + S SG++ +I ++ E
Sbjct: 57 DPYVMVRSAELEGYCIDLLKALASMLHFSYKVKVVGDGKYGAISPSGNWTGMIGEILRQE 116
Query: 386 FDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKD-SKKRNAWVFLQPLTWDLWVTSG 444
D V T+ R V FT P+ ++G+ +++ + S++ + + FL P + + W +G
Sbjct: 117 ADIAVAPLTVTSAREEVVSFTTPFLQTGIGILLRKETISQEMSFFHFLAPFSKETW--TG 174
Query: 445 CFFIFIGFVVWV-LEHRVNE-DFRGPARHQVGTSF----WFSFSTMVF---SQRERVISN 495
F ++ V + L R++ ++ P + +F WF + + R + S
Sbjct: 175 LLFAYVLTCVCLFLVARLSPCEWNEPKNEENHFTFLNSLWFGAGALTLQGVTPRPKAFS- 233
Query: 496 LARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIK-RGDNVGYQKGSFVL 554
R + +W + L+ +Y A+ T+LL+ Q +I L+K R G GS
Sbjct: 234 -VRVIAAIWWLFTIALLAAYIANFTALLSSGSEQLSIQTFEDLVKQRKLEFGTLDGSSTF 292
Query: 555 GILKQLGFDERKLVVYNSHEECDELFQKGSANG------GIAAAFDEIPYAKLLIGQHCS 608
K ++V + D + K A E L +HC+
Sbjct: 293 YFFKNSKNPIHRMVYEYMDKRRDHVLVKTYQEAVQRVMESNYAFIGESISQDLAAARHCN 352
Query: 609 KYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSC 663
E GFG A SP +S A+L + E + + + W++ SSC
Sbjct: 353 LIRAPE-VIGARGFGIATAQASPWTKKLSVAVLKLRETGDLDYLRNKWWE--SSC 404
>UNIPROTKB|O15399 [details] [associations]
symbol:GRIN2D "Glutamate receptor ionotropic, NMDA 2D"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0001964 "startle
response" evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0051930 "regulation of
sensory perception of pain" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005886 GO:GO:0007268 GO:GO:0051930 GO:GO:0030054
GO:GO:0045211 GO:GO:0008344 GO:GO:0035235 GO:GO:0035249
DrugBank:DB00142 GO:GO:0030288 InterPro:IPR001828 DrugBank:DB00836
GO:GO:0001964 DrugBank:DB01173 GO:GO:0016595 GO:GO:0017146
GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132 GO:GO:0022843
EMBL:AC008403 GO:GO:0004972 OrthoDB:EOG42RD6M EMBL:U77783
EMBL:AC011527 IPI:IPI00006217 RefSeq:NP_000827.2 UniGene:Hs.445015
ProteinModelPortal:O15399 SMR:O15399 IntAct:O15399 MINT:MINT-130143
STRING:O15399 PhosphoSite:O15399 PaxDb:O15399 PRIDE:O15399
Ensembl:ENST00000263269 GeneID:2906 KEGG:hsa:2906 UCSC:uc002pjc.4
CTD:2906 GeneCards:GC19P048898 H-InvDB:HIX0040164 HGNC:HGNC:4588
HPA:HPA038269 MIM:602717 neXtProt:NX_O15399 PharmGKB:PA28982
HOGENOM:HOG000113803 HOVERGEN:HBG052637 InParanoid:O15399 KO:K05212
OMA:ARCGCPR PhylomeDB:O15399 BindingDB:O15399 ChEMBL:CHEMBL2591
GenomeRNAi:2906 NextBio:11507 Bgee:O15399 CleanEx:HS_GRIN2D
Genevestigator:O15399 GermOnline:ENSG00000105464 Uniprot:O15399
Length = 1336
Score = 189 (71.6 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 52/221 (23%), Positives = 105/221 (47%)
Query: 330 PKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAV 389
P+ ++ G+ ID+ K + + ++ V + G +N +I +VF D
Sbjct: 477 PRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMA 536
Query: 390 VGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSG--CFF 447
+G TI RS VDF++P+ E+G+S++V + + + FL+P + +WV C
Sbjct: 537 IGSLTINEERSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPAVWVMMFVMCLT 595
Query: 448 IFIGFVVWVLEHR----VNEDFR-----GPARHQVGTSFWFSFSTMVFSQR---ERVISN 495
+ + V++ E+ N G + +G S W ++ +VF+ E
Sbjct: 596 V-VAVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWA-LVFNNSVPVENPRGT 653
Query: 496 LARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
++ +V+VW F +I + SYTA+L + + ++ T++ ++
Sbjct: 654 TSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGLS 694
Score = 50 (22.7 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 73 KLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
+L ++ ++ +L +F A E GL G VW M
Sbjct: 235 QLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGSGYVWFM 274
Score = 48 (22.0 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 617 FKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW 656
F T G+G A S + A+L D+++ +E W
Sbjct: 784 FATTGYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLW 823
Score = 40 (19.1 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 187 AVEKAGITGFGF 198
A E+AG+TG G+
Sbjct: 259 AAEEAGLTGSGY 270
>MGI|MGI:95823 [details] [associations]
symbol:Grin2d "glutamate receptor, ionotropic, NMDA2D (epsilon
4)" species:10090 "Mus musculus" [GO:0001964 "startle response"
evidence=IMP] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IMP;IDA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016595 "glutamate binding" evidence=ISO] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO] [GO:0022843 "voltage-gated cation channel activity"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IMP;IDA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISO] [GO:0042165 "neurotransmitter binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IMP] [GO:0051930 "regulation of sensory perception of
pain" evidence=IMP] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IMP] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95823 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008344 GO:GO:0045202
GO:GO:0035249 GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964
GO:GO:0016595 GO:GO:0017146 GO:GO:0042165 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0022843 GO:GO:0004972
GeneTree:ENSGT00540000070221 OrthoDB:EOG42RD6M CTD:2906
HOGENOM:HOG000113803 HOVERGEN:HBG052637 KO:K05212 OMA:ARCGCPR
EMBL:AB154245 EMBL:D12822 IPI:IPI00131279 PIR:S27224
RefSeq:NP_032198.2 UniGene:Mm.322594 ProteinModelPortal:Q03391
SMR:Q03391 IntAct:Q03391 STRING:Q03391 PhosphoSite:Q03391
PaxDb:Q03391 PRIDE:Q03391 Ensembl:ENSMUST00000002848 GeneID:14814
KEGG:mmu:14814 InParanoid:Q03391 BindingDB:Q03391 ChEMBL:CHEMBL2893
NextBio:287011 Bgee:Q03391 Genevestigator:Q03391
GermOnline:ENSMUSG00000002771 Uniprot:Q03391
Length = 1323
Score = 189 (71.6 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 52/221 (23%), Positives = 105/221 (47%)
Query: 330 PKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAV 389
P+ ++ G+ ID+ K + + ++ V + G +N +I +VF D
Sbjct: 474 PRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMA 533
Query: 390 VGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSG--CFF 447
+G TI RS VDF++P+ E+G+S++V + + + FL+P + +WV C
Sbjct: 534 IGSLTINEERSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPAVWVMMFVMCLT 592
Query: 448 IFIGFVVWVLEHR----VNEDFR-----GPARHQVGTSFWFSFSTMVFSQR---ERVISN 495
+ + V++ E+ N G + +G S W ++ +VF+ E
Sbjct: 593 V-VAVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWA-LVFNNSVPVENPRGT 650
Query: 496 LARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
++ +V+VW F +I + SYTA+L + + ++ T++ ++
Sbjct: 651 TSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGLS 691
Score = 49 (22.3 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 73 KLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
+L ++ ++ +L +F A E GL G VW M
Sbjct: 232 QLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVWFM 271
Score = 48 (22.0 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 617 FKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW 656
F T G+G A S + A+L D+++ +E W
Sbjct: 781 FATTGYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLW 820
Score = 38 (18.4 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 187 AVEKAGITGFGF 198
A E+AG+TG G+
Sbjct: 256 AAEEAGLTGPGY 267
>RGD|2740 [details] [associations]
symbol:Grin2d "glutamate receptor, ionotropic, N-methyl D-aspartate
2D" species:10116 "Rattus norvegicus" [GO:0001964 "startle response"
evidence=ISO] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA;IDA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IDA;IMP] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005261 "cation channel activity" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=TAS] [GO:0008344 "adult locomotory
behavior" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016595 "glutamate binding" evidence=IMP]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IDA] [GO:0022843 "voltage-gated cation channel
activity" evidence=IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IDA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IMP] [GO:0042165 "neurotransmitter binding" evidence=IMP]
[GO:0045202 "synapse" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051930 "regulation of sensory perception
of pain" evidence=ISO] [GO:0050966 "detection of mechanical stimulus
involved in sensory perception of pain" evidence=ISO] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2740
GO:GO:0051930 GO:GO:0030054 GO:GO:0045211 GO:GO:0008344 GO:GO:0035249
GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964 GO:GO:0016595
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0022843 GO:GO:0004972 OrthoDB:EOG42RD6M CTD:2906
HOGENOM:HOG000113803 HOVERGEN:HBG052637 KO:K05212 EMBL:D13213
EMBL:D13214 EMBL:L31611 EMBL:L31612 EMBL:U08260 IPI:IPI00207093
IPI:IPI00231059 PIR:I78557 RefSeq:NP_073634.1 UniGene:Rn.91209
PDB:3OEK PDB:3OEL PDB:3OEM PDB:3OEN PDBsum:3OEK PDBsum:3OEL
PDBsum:3OEM PDBsum:3OEN ProteinModelPortal:Q62645 SMR:Q62645
IntAct:Q62645 MINT:MINT-103662 STRING:Q62645 PhosphoSite:Q62645
GeneID:24412 KEGG:rno:24412 UCSC:RGD:2740 InParanoid:Q62645
BindingDB:Q62645 ChEMBL:CHEMBL303 EvolutionaryTrace:Q62645
NextBio:603239 ArrayExpress:Q62645 Genevestigator:Q62645
GermOnline:ENSRNOG00000021063 Uniprot:Q62645
Length = 1323
Score = 189 (71.6 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 52/221 (23%), Positives = 105/221 (47%)
Query: 330 PKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAV 389
P+ ++ G+ ID+ K + + ++ V + G +N +I +VF D
Sbjct: 474 PRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMA 533
Query: 390 VGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSG--CFF 447
+G TI RS VDF++P+ E+G+S++V + + + FL+P + +WV C
Sbjct: 534 IGSLTINEERSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPAVWVMMFVMCLT 592
Query: 448 IFIGFVVWVLEHR----VNEDFR-----GPARHQVGTSFWFSFSTMVFSQR---ERVISN 495
+ + V++ E+ N G + +G S W ++ +VF+ E
Sbjct: 593 V-VAVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWA-LVFNNSVPVENPRGT 650
Query: 496 LARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
++ +V+VW F +I + SYTA+L + + ++ T++ ++
Sbjct: 651 TSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGLS 691
Score = 49 (22.3 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 73 KLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
+L ++ ++ +L +F A E GL G VW M
Sbjct: 232 QLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVWFM 271
Score = 48 (22.0 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 617 FKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW 656
F T G+G A S + A+L D+++ +E W
Sbjct: 781 FATTGYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLW 820
Score = 38 (18.4 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 187 AVEKAGITGFGF 198
A E+AG+TG G+
Sbjct: 256 AAEEAGLTGPGY 267
>UNIPROTKB|Q62645 [details] [associations]
symbol:Grin2d "Glutamate receptor ionotropic, NMDA 2D"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2740 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008344 GO:GO:0035249
GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964 GO:GO:0016595
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0022843 GO:GO:0004972 OrthoDB:EOG42RD6M CTD:2906
HOGENOM:HOG000113803 HOVERGEN:HBG052637 KO:K05212 EMBL:D13213
EMBL:D13214 EMBL:L31611 EMBL:L31612 EMBL:U08260 IPI:IPI00207093
IPI:IPI00231059 PIR:I78557 RefSeq:NP_073634.1 UniGene:Rn.91209
PDB:3OEK PDB:3OEL PDB:3OEM PDB:3OEN PDBsum:3OEK PDBsum:3OEL
PDBsum:3OEM PDBsum:3OEN ProteinModelPortal:Q62645 SMR:Q62645
IntAct:Q62645 MINT:MINT-103662 STRING:Q62645 PhosphoSite:Q62645
GeneID:24412 KEGG:rno:24412 UCSC:RGD:2740 InParanoid:Q62645
BindingDB:Q62645 ChEMBL:CHEMBL303 EvolutionaryTrace:Q62645
NextBio:603239 ArrayExpress:Q62645 Genevestigator:Q62645
GermOnline:ENSRNOG00000021063 Uniprot:Q62645
Length = 1323
Score = 189 (71.6 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 52/221 (23%), Positives = 105/221 (47%)
Query: 330 PKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAV 389
P+ ++ G+ ID+ K + + ++ V + G +N +I +VF D
Sbjct: 474 PRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMA 533
Query: 390 VGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSG--CFF 447
+G TI RS VDF++P+ E+G+S++V + + + FL+P + +WV C
Sbjct: 534 IGSLTINEERSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPAVWVMMFVMCLT 592
Query: 448 IFIGFVVWVLEHR----VNEDFR-----GPARHQVGTSFWFSFSTMVFSQR---ERVISN 495
+ + V++ E+ N G + +G S W ++ +VF+ E
Sbjct: 593 V-VAVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWA-LVFNNSVPVENPRGT 650
Query: 496 LARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
++ +V+VW F +I + SYTA+L + + ++ T++ ++
Sbjct: 651 TSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGLS 691
Score = 49 (22.3 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 73 KLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
+L ++ ++ +L +F A E GL G VW M
Sbjct: 232 QLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVWFM 271
Score = 48 (22.0 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 617 FKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAW 656
F T G+G A S + A+L D+++ +E W
Sbjct: 781 FATTGYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLW 820
Score = 38 (18.4 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 187 AVEKAGITGFGF 198
A E+AG+TG G+
Sbjct: 256 AAEEAGLTGPGY 267
>UNIPROTKB|B7Z7L0 [details] [associations]
symbol:GRID1 "Glutamate receptor ionotropic, delta-1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 GO:GO:0005234 GO:GO:0004970 UniGene:Hs.530653
HGNC:HGNC:4575 OrthoDB:EOG4ZCT3V EMBL:AL844892 EMBL:AC022028
EMBL:AC073162 EMBL:AC079955 EMBL:AL451059 EMBL:AL596135
EMBL:AL683834 EMBL:AL732479 EMBL:AK302192 IPI:IPI01012961
SMR:B7Z7L0 STRING:B7Z7L0 Ensembl:ENST00000536331 HOVERGEN:HBG106261
Uniprot:B7Z7L0
Length = 580
Score = 182 (69.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 88/382 (23%), Positives = 155/382 (40%)
Query: 323 FVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGT-----SSGSYNDL 377
FV V + Q G+SIDV A+ + L + Y+ Y PDG + S+N +
Sbjct: 20 FVMVAENILGQPKRYKGFSIDVLDALAKALGFK--YEI--YQAPDGRYGHQLHNTSWNGM 75
Query: 378 IYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTW 437
I ++ D + TI R + VDF+ Y + V +++ K +K + + P +
Sbjct: 76 IGELISKRADLAISAITITPERESVVDFSKRYMDYSVGILIK-KPEEKISIFSLFAPFDF 134
Query: 438 DLWVTSGCFFIFIGFVVWVLEH----RVNEDF--RGPARHQVGTSFWFSFSTMVFSQRER 491
+W +G +++VL R R A + ++ W + V E
Sbjct: 135 AVWACIAAAIPVVGVLIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGES 194
Query: 492 VISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQK 549
++++A R V+ W LI+ SYTA+L + LTV ++ I L K+ + + G +
Sbjct: 195 SVNSMAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGTVR 254
Query: 550 GSFVLGILKQLG---------FDE--RKLVVYNSHEECDELFQKG---SANGGIAAAFD- 594
S V + G F E R + + C +G + G A +D
Sbjct: 255 DSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGGADNCVSSPSEGIRKAKKGNYAFLWDV 314
Query: 595 EIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIED 654
+ L CS T++ + + G+G A SP S+ IL + + + ++
Sbjct: 315 AVVEYAALTDDDCS-VTVIGNSISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQ 373
Query: 655 AWFKKHSSCPDAGTVVSARSLG 676
W+ C D + SA++ G
Sbjct: 374 KWWPHMGRC-DLTSHASAQADG 394
>UNIPROTKB|F1Q0E7 [details] [associations]
symbol:GRID1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 OMA:LLPWICQ EMBL:AAEX03002913
EMBL:AAEX03002914 EMBL:AAEX03002915 EMBL:AAEX03002916
Ensembl:ENSCAFT00000025292 Uniprot:F1Q0E7
Length = 768
Score = 183 (69.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 89/382 (23%), Positives = 154/382 (40%)
Query: 323 FVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGT-----SSGSYNDL 377
FV V + Q G+SIDV A+ + L + Y+ Y PDG + S+N +
Sbjct: 208 FVMVAENILGQPKRYKGFSIDVLDALAKALGFK--YEI--YQAPDGRYGHQLHNTSWNGM 263
Query: 378 IYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTW 437
I ++ D + TI R + VDF+ Y + V +++ K +K + + P +
Sbjct: 264 IGELISKRADLAISAITITPERESVVDFSKRYMDYSVGILIK-KPEEKISIFSLFAPFDF 322
Query: 438 DLWVTSGCFFIFIGFVVWVLEH----RVNEDF--RGPARHQVGTSFWFSFSTMVFSQRER 491
+W +G +++VL R R A + ++ W + V E
Sbjct: 323 AVWACIAAAIPVVGVLIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGES 382
Query: 492 VISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQK 549
++++A R V+ W LI+ SYTA+L + LTV ++ I L K+ D + G +
Sbjct: 383 SVNSMAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVDISYGTVR 442
Query: 550 GSFVLGILKQLG---------FDE--RKLVVYNSHEECDELFQKG---SANGGIAAAFD- 594
S V + G F E R + + C +G + G A +D
Sbjct: 443 DSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGGADNCVSSPSEGIRKAKKGSYAFLWDV 502
Query: 595 EIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIED 654
+ L CS T+ + + G+G A SP S+ IL + + + ++
Sbjct: 503 AVVEYAALTDDDCS-VTVTGNSVSSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQ 561
Query: 655 AWFKKHSSCPDAGTVVSARSLG 676
W+ C D + SA++ G
Sbjct: 562 KWWPHMGRC-DLTSPASAQADG 582
>RGD|621705 [details] [associations]
symbol:Grin3b "glutamate receptor, ionotropic,
N-methyl-D-aspartate 3B" species:10116 "Rattus norvegicus"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IDA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISO;IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030594 "neurotransmitter receptor
activity" evidence=IDA] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=IDA] [GO:0042165 "neurotransmitter
binding" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051205 "protein insertion into membrane" evidence=ISO]
[GO:0051924 "regulation of calcium ion transport" evidence=ISO]
[GO:0005262 "calcium channel activity" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 RGD:621705 GO:GO:0005262 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0035235
GO:GO:0051924 GO:GO:0030288 GO:GO:0005261 GO:GO:0051205
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
GO:GO:0016594 eggNOG:NOG320645 HOGENOM:HOG000231528
HOVERGEN:HBG052634 OrthoDB:EOG480HW2 CTD:116444 KO:K05214
EMBL:AF440691 IPI:IPI00207177 RefSeq:NP_579842.2 UniGene:Rn.162906
PDB:2RCA PDB:2RCB PDBsum:2RCA PDBsum:2RCB ProteinModelPortal:Q8VHN2
SMR:Q8VHN2 STRING:Q8VHN2 PRIDE:Q8VHN2 GeneID:170796 KEGG:rno:170796
UCSC:RGD:621705 BindingDB:Q8VHN2 ChEMBL:CHEMBL282
EvolutionaryTrace:Q8VHN2 NextBio:621215 ArrayExpress:Q8VHN2
Genevestigator:Q8VHN2 GermOnline:ENSRNOG00000012562 Uniprot:Q8VHN2
Length = 1002
Score = 176 (67.0 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 76/359 (21%), Positives = 147/359 (40%)
Query: 320 FSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGT----SSGSYN 375
F+ V ++ P+T GY ID+ + + E+L A+DF Y DG G +
Sbjct: 460 FAALVNGSV-PRTLRRCCYGYCIDLLERLAEDL----AFDFELYIVGDGKYGALRDGRWT 514
Query: 376 DLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPL 435
L+ + G V +I RS VDFT P+ + + ++V +D+ F+ PL
Sbjct: 515 GLVGDLLAGRAHMAVTSFSINSARSQVVDFTSPFFSTSLGIMVRTRDTASPIG-AFMWPL 573
Query: 436 TWDLWVTSGCFFIFIGFVVWVLEHRVNEDFRGPARHQVGTSFWFSFS-TMVFSQR-ERVI 493
W +WV + + E R R++ GT F +S + + ++ R +
Sbjct: 574 HWSMWVGVFAALHLTALFLTLYEWRSPYGLTPRGRNR-GTVFSYSSALNLCYAILFGRTV 632
Query: 494 SN------LARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGY 547
S+ RF++ +W L+++ SYTA+L +++ D+ ++ ++ + G+
Sbjct: 633 SSKTPKCPTGRFLMNLWAIFCLLVLSSYTANLAAVMVGDKTFEELSGIHDPKLHHPSQGF 692
Query: 548 QKGS--------FVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPYA 599
+ G+ ++ ++ R+ + L + Y
Sbjct: 693 RFGTVWESSAEAYIKASFPEMHAHMRRHSAPTTPHGVAMLTSDPPKLNAFIMDKSLLDY- 751
Query: 600 KLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFK 658
++ I C T+ +P F G+G P +SPL ++S+ I + + D W+K
Sbjct: 752 EVSIDADCKLLTVGKP-FAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYK 809
Score = 58 (25.5 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 206 NATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVDGQLQ---SSAFEIINVNNGARGV 262
N DL+ G G L + L + F+G TG ++V G Q S F++ ++ G
Sbjct: 322 NCDDLKTGGSEATGRTLARFLGNTSFQGRTGA-VWVTGSSQVHVSRHFKVWSLRRDPLGA 380
Query: 263 GFWS 266
W+
Sbjct: 381 PAWA 384
>UNIPROTKB|Q8VHN2 [details] [associations]
symbol:Grin3b "Glutamate receptor ionotropic, NMDA 3B"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 RGD:621705 GO:GO:0005262 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0035235
GO:GO:0051924 GO:GO:0030288 GO:GO:0005261 GO:GO:0051205
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
GO:GO:0016594 eggNOG:NOG320645 HOGENOM:HOG000231528
HOVERGEN:HBG052634 OrthoDB:EOG480HW2 CTD:116444 KO:K05214
EMBL:AF440691 IPI:IPI00207177 RefSeq:NP_579842.2 UniGene:Rn.162906
PDB:2RCA PDB:2RCB PDBsum:2RCA PDBsum:2RCB ProteinModelPortal:Q8VHN2
SMR:Q8VHN2 STRING:Q8VHN2 PRIDE:Q8VHN2 GeneID:170796 KEGG:rno:170796
UCSC:RGD:621705 BindingDB:Q8VHN2 ChEMBL:CHEMBL282
EvolutionaryTrace:Q8VHN2 NextBio:621215 ArrayExpress:Q8VHN2
Genevestigator:Q8VHN2 GermOnline:ENSRNOG00000012562 Uniprot:Q8VHN2
Length = 1002
Score = 176 (67.0 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 76/359 (21%), Positives = 147/359 (40%)
Query: 320 FSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGT----SSGSYN 375
F+ V ++ P+T GY ID+ + + E+L A+DF Y DG G +
Sbjct: 460 FAALVNGSV-PRTLRRCCYGYCIDLLERLAEDL----AFDFELYIVGDGKYGALRDGRWT 514
Query: 376 DLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPL 435
L+ + G V +I RS VDFT P+ + + ++V +D+ F+ PL
Sbjct: 515 GLVGDLLAGRAHMAVTSFSINSARSQVVDFTSPFFSTSLGIMVRTRDTASPIG-AFMWPL 573
Query: 436 TWDLWVTSGCFFIFIGFVVWVLEHRVNEDFRGPARHQVGTSFWFSFS-TMVFSQR-ERVI 493
W +WV + + E R R++ GT F +S + + ++ R +
Sbjct: 574 HWSMWVGVFAALHLTALFLTLYEWRSPYGLTPRGRNR-GTVFSYSSALNLCYAILFGRTV 632
Query: 494 SN------LARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGY 547
S+ RF++ +W L+++ SYTA+L +++ D+ ++ ++ + G+
Sbjct: 633 SSKTPKCPTGRFLMNLWAIFCLLVLSSYTANLAAVMVGDKTFEELSGIHDPKLHHPSQGF 692
Query: 548 QKGS--------FVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPYA 599
+ G+ ++ ++ R+ + L + Y
Sbjct: 693 RFGTVWESSAEAYIKASFPEMHAHMRRHSAPTTPHGVAMLTSDPPKLNAFIMDKSLLDY- 751
Query: 600 KLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFK 658
++ I C T+ +P F G+G P +SPL ++S+ I + + D W+K
Sbjct: 752 EVSIDADCKLLTVGKP-FAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYK 809
Score = 58 (25.5 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 206 NATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVDGQLQ---SSAFEIINVNNGARGV 262
N DL+ G G L + L + F+G TG ++V G Q S F++ ++ G
Sbjct: 322 NCDDLKTGGSEATGRTLARFLGNTSFQGRTGA-VWVTGSSQVHVSRHFKVWSLRRDPLGA 380
Query: 263 GFWS 266
W+
Sbjct: 381 PAWA 384
>ZFIN|ZDB-GENE-070821-6 [details] [associations]
symbol:grik5 "glutamate receptor, ionotropic, kainate
5" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070821-6 GO:GO:0016021
GO:GO:0035235 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 EMBL:BX005242 EMBL:CR388405
IPI:IPI00884667 ProteinModelPortal:F1RCX4
Ensembl:ENSDART00000114766 Bgee:F1RCX4 Uniprot:F1RCX4
Length = 716
Score = 155 (59.6 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 53/225 (23%), Positives = 99/225 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
G+ +D+ + + + L + V Y P+ +GS+ ++ ++ + D V TI
Sbjct: 436 GFCVDMLRELSDILKFTYRIKLVDDGLYGAPE--PNGSWTGMVGELINRKADLAVAAFTI 493
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVV- 454
R +DF+ P+ G+S++ + +K + FL P + +W+ ++ + V+
Sbjct: 494 TSEREKVIDFSKPFMTLGISILYRVHIGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLF 553
Query: 455 ---------WVLEHRVNEDFRGPARHQ--VGTSFWFSFSTMVFSQRERVISNLA-RFVVI 502
W H + R +Q +G S WF + E + L+ R V
Sbjct: 554 LSARLSPYEWYNPHPCLRERRDLLENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSG 613
Query: 503 VWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGY 547
VW LI+I SYTA+L + LTV +++ I + L + N+ Y
Sbjct: 614 VWWAFTLIIISSYTANLAAFLTVQRMEVPIESPDDLADQ-TNIQY 657
Score = 76 (31.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 47/220 (21%), Positives = 89/220 (40%)
Query: 55 RSVISPLATDDQIEKE--LYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
R +S DD ++ L ++ + I+ S+ I +KA+E+G+ + +I+
Sbjct: 176 RETLSIRMLDDNLDPTPLLKEIRDDKIATIIIDANASISYLILKKASELGMTSAFYKYIL 235
Query: 113 TDGMTNLLRTLEPSVTDSMQGVIGVRPYVPK----TKALENFRVRWKRKFLQENPSLFDA 168
T M L L+ + D ++G + + + + + W R+ NP A
Sbjct: 236 TT-MDFPLLWLD-DIVDEQSNIVGFSMFNTTHPFYLEFIRSLNLSW-REGCDINPYPGPA 292
Query: 169 ELNIFGLLAYDATSALAVAVEKAGITG-FGFDKTNVSSNATDLEAFGISQNGPKLLQALS 227
+ L +DA + AV++ + G + +S I Q+G L+ L
Sbjct: 293 ---LSSALLFDAVHVVVSAVQELNRSQEIGVKPLSCTSPQ-------IWQHGTSLMNYLR 342
Query: 228 SIRFRGLTGDYIFVD-GQLQSSAFEIINVNNGA-RGVGFW 265
+ + GLTG F GQ + I+ + G + +G W
Sbjct: 343 MVEYDGLTGRVEFNSKGQRTNYTLHILEKHRGGHKEIGIW 382
>ZFIN|ZDB-GENE-070424-223 [details] [associations]
symbol:grin2ab "glutamate receptor, ionotropic,
N-methyl D-aspartate 2A, b" species:7955 "Danio rerio" [GO:0004872
"receptor activity" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070424-223
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 EMBL:BX005261
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:CT573178 IPI:IPI00489045
Ensembl:ENSDART00000103652 Ensembl:ENSDART00000137900
Uniprot:F1QDE5
Length = 1445
Score = 171 (65.3 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 54/241 (22%), Positives = 110/241 (45%)
Query: 310 LRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGT 369
+R VP +K D T + + G+ ID+ K + + + V +
Sbjct: 420 MRNSVPCRKHIKDN---TTEGSYVKKCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKK 476
Query: 370 SSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAW 429
+ +N ++ +V + VG TI RS +DF++P+ E+G+S++V + + +
Sbjct: 477 INNVWNGMVGEVVYKKAVMAVGSLTINEERSEAIDFSVPFVETGISVMVS-RSNGTVSPS 535
Query: 430 VFLQPLTWDLWVTSGCFFIFI-GFVVWVLE-------HR---VNEDFRGPARHQVGTSFW 478
FL+P + +WV + + V++ E +R +D GP+ +G + W
Sbjct: 536 AFLEPFSASVWVMMFVMLLIVTAIAVFLFEFISPLGFNRNLAQGKDPHGPS-FTIGKAVW 594
Query: 479 FSFSTMVFSQRERVIS---NLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDV 535
+ +VF+ V + ++F+V VW F +I + SYTA+L + + ++ +T +
Sbjct: 595 LLWG-LVFNNSVPVQNPRGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGL 653
Query: 536 N 536
+
Sbjct: 654 S 654
Score = 66 (28.3 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 24/121 (19%), Positives = 50/121 (41%)
Query: 14 AIIKAFGWREAVPIYVDNQYGEELIPSLTDALQAIDTRVPYRSVISPLATDDQIEKELYK 73
AI++ + W + +E I ++ + R +SV++ + ++ +
Sbjct: 149 AIMEEYDWHVFSVVTTKFPGFQEFIATVRVTVDHSFVRWDLQSVVTLDGVGEPEDRAHVQ 208
Query: 74 LFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDSMQG 133
L +Q+ V +L+ + + E+A +GL G VWI+ T L + + M
Sbjct: 209 LKRIQSPVILLYCSKDEAALVMEEARSLGLTGAGFVWIVPSLTTGNLEHIPEAFPAGMIS 268
Query: 134 V 134
V
Sbjct: 269 V 269
>UNIPROTKB|Q9ULK0 [details] [associations]
symbol:GRID1 "Glutamate receptor ionotropic, delta-1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 DrugBank:DB00142 GO:GO:0030288 EMBL:CH471142
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AK127168
EMBL:BC039263 EMBL:AB033046 IPI:IPI00374337 RefSeq:NP_060021.1
UniGene:Hs.530653 ProteinModelPortal:Q9ULK0 SMR:Q9ULK0
STRING:Q9ULK0 PhosphoSite:Q9ULK0 DMDM:38372397 PaxDb:Q9ULK0
PRIDE:Q9ULK0 Ensembl:ENST00000327946 GeneID:2894 KEGG:hsa:2894
UCSC:uc001kdl.1 CTD:2894 GeneCards:GC10M087349 HGNC:HGNC:4575
MIM:610659 neXtProt:NX_Q9ULK0 PharmGKB:PA28970 eggNOG:NOG276334
HOGENOM:HOG000264260 HOVERGEN:HBG051840 InParanoid:Q9ULK0 KO:K05206
OMA:LLPWICQ PhylomeDB:Q9ULK0 BindingDB:Q9ULK0 ChEMBL:CHEMBL2936
GenomeRNAi:2894 NextBio:11451 ArrayExpress:Q9ULK0 Bgee:Q9ULK0
CleanEx:HS_GRID1 Genevestigator:Q9ULK0 GermOnline:ENSG00000182771
Uniprot:Q9ULK0
Length = 1009
Score = 182 (69.1 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 88/382 (23%), Positives = 155/382 (40%)
Query: 323 FVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGT-----SSGSYNDL 377
FV V + Q G+SIDV A+ + L + Y+ Y PDG + S+N +
Sbjct: 449 FVMVAENILGQPKRYKGFSIDVLDALAKALGFK--YEI--YQAPDGRYGHQLHNTSWNGM 504
Query: 378 IYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTW 437
I ++ D + TI R + VDF+ Y + V +++ K +K + + P +
Sbjct: 505 IGELISKRADLAISAITITPERESVVDFSKRYMDYSVGILIK-KPEEKISIFSLFAPFDF 563
Query: 438 DLWVTSGCFFIFIGFVVWVLEH----RVNEDF--RGPARHQVGTSFWFSFSTMVFSQRER 491
+W +G +++VL R R A + ++ W + V E
Sbjct: 564 AVWACIAAAIPVVGVLIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGES 623
Query: 492 VISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQK 549
++++A R V+ W LI+ SYTA+L + LTV ++ I L K+ + + G +
Sbjct: 624 SVNSMAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGTVR 683
Query: 550 GSFVLGILKQLG---------FDE--RKLVVYNSHEECDELFQKG---SANGGIAAAFD- 594
S V + G F E R + + C +G + G A +D
Sbjct: 684 DSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGGADNCVSSPSEGIRKAKKGNYAFLWDV 743
Query: 595 EIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIED 654
+ L CS T++ + + G+G A SP S+ IL + + + ++
Sbjct: 744 AVVEYAALTDDDCS-VTVIGNSISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQ 802
Query: 655 AWFKKHSSCPDAGTVVSARSLG 676
W+ C D + SA++ G
Sbjct: 803 KWWPHMGRC-DLTSHASAQADG 823
>ZFIN|ZDB-GENE-070912-354 [details] [associations]
symbol:grin3b "glutamate receptor, ionotropic,
N-methyl-D-aspartate 3B" species:7955 "Danio rerio" [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 ZFIN:ZDB-GENE-070912-354 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 EMBL:CR392012 EMBL:CT954241
IPI:IPI00482751 Ensembl:ENSDART00000058111 Uniprot:E7F2N4
Length = 1118
Score = 192 (72.6 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 79/373 (21%), Positives = 151/373 (40%)
Query: 330 PKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAV 389
P GY ID+ + + E++ + V + G ++ L+ + G D
Sbjct: 513 PTDMRKCCYGYCIDLLEKLAEDMHFEFDLYIVGDGKYGAWKGGRWSGLVGDLLSGVADMA 572
Query: 390 VGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIF 449
V +I RS +DFT P+ + + ++V KD+ F+ PL W +WV G F
Sbjct: 573 VTSFSINSARSRVIDFTSPFFSTSLGILVRSKDTAAPIG-AFMWPLHWSMWV--GIFVAL 629
Query: 450 IGFVVWVLEHRVNEDFRGPARHQVGTSFWFSFST---MVFSQR-ERVISN------LARF 499
+++ + N F G H FS+S+ + ++ R +++ RF
Sbjct: 630 HITALFITLYEWNSPF-GMTPHGRNRIRVFSYSSALNLCYAILFGRTVASKTPKCWTGRF 688
Query: 500 VVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGSFVLGILKQ 559
++ +W L+++ SYTA+L +++ ++ ++ ++ + ++G++ G+ + +
Sbjct: 689 LMNLWAIFCLLVLSSYTANLAAVMVGEKTFEEVSGIHDVKLHHPSLGFRFGT----VRES 744
Query: 560 LGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPYA------KLL------IGQHC 607
D K HE F K + G++ + P K L I C
Sbjct: 745 SAEDYVKKSFPEMHEYMRR-FNKPTTPDGVSTLKTDPPQLDAFIMDKALLDYEVSIDADC 803
Query: 608 SKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAG 667
T+ +P F G+G P +SPL +VS+ + M + D W+K
Sbjct: 804 KLLTVGKP-FAIEGYGIGLPQNSPLTRNVSEYVSRYKSDGYMDMLHDKWYKVVPCGKRVF 862
Query: 668 TVVSARSLGLNSF 680
V +G+ F
Sbjct: 863 AVTETLQMGIQHF 875
Score = 41 (19.5 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 215 ISQNGPKLLQALSSIRFRGLTGDYIFVDGQ----LQSSAFEIINVNNGARGVGFW 265
+ +G L + LS+ F GLTG + V+ L S F I ++ G W
Sbjct: 355 LPSSGQYLARFLSNTSFTGLTGP-VRVERSFSRVLTSQRFHIWSLQRDPLGQPSW 408
>MGI|MGI:2150393 [details] [associations]
symbol:Grin3b "glutamate receptor, ionotropic, NMDA3B"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005261 "cation channel activity" evidence=ISO] [GO:0005262
"calcium channel activity" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=ISO] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=ISO;IMP] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030594 "neurotransmitter
receptor activity" evidence=ISO] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=IEA;ISO] [GO:0042165
"neurotransmitter binding" evidence=ISO] [GO:0043025 "neuronal cell
body" evidence=IMP;IDA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0051205
"protein insertion into membrane" evidence=IMP] [GO:0051924
"regulation of calcium ion transport" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 MGI:MGI:2150393 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0051924
GO:GO:0030288 GO:GO:0005261 GO:GO:0051205 GO:GO:0070588
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
GO:GO:0016594 GeneTree:ENSGT00700000104113 eggNOG:NOG320645
HOGENOM:HOG000231528 HOVERGEN:HBG052634 CTD:116444 KO:K05214
OMA:HLQLDWA EMBL:AF396649 EMBL:AY062435 EMBL:AF373861
IPI:IPI00131433 RefSeq:NP_569722.1 UniGene:Mm.391566
ProteinModelPortal:Q91ZU9 SMR:Q91ZU9 STRING:Q91ZU9
PhosphoSite:Q91ZU9 PRIDE:Q91ZU9 DNASU:170483
Ensembl:ENSMUST00000045085 GeneID:170483 KEGG:mmu:170483
UCSC:uc007gau.1 InParanoid:Q91ZU9 BindingDB:Q91ZU9
ChEMBL:CHEMBL2557 NextBio:370111 Bgee:Q91ZU9 CleanEx:MM_GRIN3B
Genevestigator:Q91ZU9 GermOnline:ENSMUSG00000035745 Uniprot:Q91ZU9
Length = 1003
Score = 175 (66.7 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 74/349 (21%), Positives = 142/349 (40%)
Query: 330 PKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGT----SSGSYNDLIYQVFLGE 385
P+T GY ID+ + + E+L A+DF Y DG G + L+ + G
Sbjct: 469 PRTLRRCCYGYCIDLLERLAEDL----AFDFELYIVGDGKYGALRDGRWTGLVGDLLAGR 524
Query: 386 FDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGC 445
V +I RS VDFT P+ + + ++V +D+ F+ PL W +WV
Sbjct: 525 AHMAVTSFSINSARSQVVDFTSPFFSTSLGIMVRTRDTASPIG-AFMWPLHWSMWVGVFA 583
Query: 446 FFIFIGFVVWVLEHRVNEDFRGPARHQVGTSFWFSFS-TMVFSQR-ERVISN------LA 497
+ + E R R++ GT F +S + + ++ R +S+
Sbjct: 584 ALHLTALFLTLYEWRSPYGLTPRGRNR-GTVFSYSSALNLCYAILFGRTVSSKTPKCPTG 642
Query: 498 RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKGS------ 551
RF++ +W L+++ SYTA+L +++ D+ ++ ++ + G++ G+
Sbjct: 643 RFLMNLWAIFCLLVLSSYTANLAAVMVGDKTFEELSGIHDPKLHHPSQGFRFGTVWESSA 702
Query: 552 --FVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPYAKLLIGQHCSK 609
++ ++ R+ + L + Y ++ I C
Sbjct: 703 EAYIKASFPEMHAHMRRHSAPTTPHGVAMLTSDPPKLNAFIMDKSLLDY-EVSIDADCKL 761
Query: 610 YTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFK 658
T+ +P F G+G P +SPL ++S+ I + + D W+K
Sbjct: 762 LTVGKP-FAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYK 809
Score = 56 (24.8 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 206 NATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVDGQLQ---SSAFEIINVNNGARGV 262
N DL+ G L + LS+ F+G TG ++V G Q S F++ ++ G
Sbjct: 322 NCEDLKTGGSESTARTLARFLSNTSFQGRTGA-VWVAGSSQVHVSRHFKVWSLRRDPLGA 380
Query: 263 GFWS 266
W+
Sbjct: 381 PAWA 384
>UNIPROTKB|H0Y2V8 [details] [associations]
symbol:GRIN2C "Glutamate receptor, ionotropic, N-methyl
D-aspartate 2C, isoform CRA_a" species:9606 "Homo sapiens"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:CH471099 EMBL:AC068874
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 UniGene:Hs.436980
HGNC:HGNC:4587 HOVERGEN:HBG052636 HOGENOM:HOG000231061
Ensembl:ENST00000347612 UCSC:uc002jlu.1 Uniprot:H0Y2V8
Length = 873
Score = 184 (69.8 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 53/213 (24%), Positives = 104/213 (48%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFN 398
G+ ID+ K + + ++ V + G +N +I +V+ D +G TI
Sbjct: 456 GFCIDILKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 515
Query: 399 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSG--CFFIFIGFVVWV 456
RS VDF++P+ E+G+S++V + + + FL+P + +WV C + + V++
Sbjct: 516 RSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPAVWVMMFVMCLTV-VAITVFM 573
Query: 457 LEH----RVNEDFR------GPARHQVGTSFWFSFSTMVFSQR---ERVISNLARFVVIV 503
E+ N++ GPA +G S W ++ +VF+ E ++ +V+V
Sbjct: 574 FEYFSPVSYNQNLTRGKKSGGPA-FTIGKSVWLLWA-LVFNNSVPIENPRGTTSKIMVLV 631
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
W F +I + SYTA+L + + +Q T++ ++
Sbjct: 632 WAFFAVIFLASYTANLAAFMIQEQYIDTVSGLS 664
Score = 45 (20.9 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 81 VFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
VF+ + +F +A + GL+ G VW++
Sbjct: 223 VFVAYCSREEAEVLFAEAAQAGLVGPGHVWLV 254
>UNIPROTKB|F1N6E6 [details] [associations]
symbol:GRID1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 OMA:LLPWICQ EMBL:DAAA02062138
EMBL:DAAA02062139 EMBL:DAAA02062140 EMBL:DAAA02062141
EMBL:DAAA02062142 IPI:IPI00694102 Ensembl:ENSBTAT00000026142
Uniprot:F1N6E6
Length = 756
Score = 178 (67.7 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 88/382 (23%), Positives = 154/382 (40%)
Query: 323 FVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGT-----SSGSYNDL 377
FV V + Q G+SIDV A+ + L + Y+ Y PDG + S+N +
Sbjct: 196 FVMVAENILGQPKRYKGFSIDVLDALAKALGFK--YEI--YQAPDGRYGHQLHNTSWNGM 251
Query: 378 IYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTW 437
I ++ D + TI R + VDF+ Y + V +++ K +K + + P +
Sbjct: 252 IGELISKRADLAISAITITPERESVVDFSKRYMDYSVGILIK-KPEEKISIFSLFAPFDF 310
Query: 438 DLWVTSGCFFIFIGFVVWVLEH----RVNEDF--RGPARHQVGTSFWFSFSTMVFSQRER 491
+W +G +++VL R R A + ++ W + V E
Sbjct: 311 AVWACIAAAIPVVGVLIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGES 370
Query: 492 VISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQK 549
+++A R V+ W LI+ SYTA+L + LTV ++ I L K+ + + G +
Sbjct: 371 SANSMAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGTVR 430
Query: 550 GSFVLGILKQLG---------FDE--RKLVVYNSHEECDELFQKG---SANGGIAAAFD- 594
S V + G F E R + + C +G + G A +D
Sbjct: 431 DSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGGADNCVSSPSEGIRKAKKGNYAFLWDV 490
Query: 595 EIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIED 654
+ L CS T++ + + G+G A SP S+ IL + + + ++
Sbjct: 491 AVVEYAALTDDDCS-VTVIANSVSSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQ 549
Query: 655 AWFKKHSSCPDAGTVVSARSLG 676
W+ C D + SA++ G
Sbjct: 550 KWWPHTGRC-DLTSHASAQADG 570
>ZFIN|ZDB-GENE-081104-209 [details] [associations]
symbol:si:ch211-264f5.8 "si:ch211-264f5.8"
species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-081104-209 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:CU207217 EMBL:CABZ01071364 EMBL:CABZ01071365
EMBL:CABZ01071366 IPI:IPI00961248 Ensembl:ENSDART00000114472
Uniprot:F1R276
Length = 979
Score = 159 (61.0 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 64/283 (22%), Positives = 123/283 (43%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
G+ +D+ + + + L ++ V Y P+ +GS+ ++ ++ + D V TI
Sbjct: 419 GFCVDMLRELADILKFSFRIKLVDDGLYGAPE--PNGSWTGMVGELINRKADLAVAGFTI 476
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVW 455
R +DF+ P+ G+S++ + +K + FL P + +W+ ++ + V++
Sbjct: 477 TSEREKVIDFSKPFMNLGISILYRVHIGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLF 536
Query: 456 VLEHRVNEDFRGPA------------RHQVGTSFWFSFSTMVFSQRERVISNLA-RFVVI 502
+ ++ P ++ +G S WF + E + L+ R V
Sbjct: 537 LAARLSPYEWYNPFPCWRERRDLLENQYTLGNSLWFPIGGFMQQGSEIMPRALSTRCVSG 596
Query: 503 VWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGY---QKGSFVLGILKQ 559
VW LI+I SYTA+L + LTV +++ I L + N+ Y Q GS + +
Sbjct: 597 VWWAFTLIIISSYTANLAAFLTVQRMEVPIESAEDLADQ-TNIQYGTIQGGSTMTFFMNS 655
Query: 560 LGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPYAKLL 602
+++ Y + + +F K S GIA + YA LL
Sbjct: 656 RYQTYQRMWNY-MYSKQPSVFVK-STEEGIARVLNS-KYAFLL 695
Score = 136 (52.9 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 52/201 (25%), Positives = 93/201 (46%)
Query: 470 RHQVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQL 528
++ +G S WF + E + L+ R V VW LI+I SYTA+L + LTV ++
Sbjct: 563 QYTLGNSLWFPIGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRM 622
Query: 529 QPTITDVNLLIKRGDNVGY---QKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSA 585
+ I L + N+ Y Q GS + + +++ Y + + +F K S
Sbjct: 623 EVPIESAEDLADQ-TNIQYGTIQGGSTMTFFMNSRYQTYQRMWNY-MYSKQPSVFVK-ST 679
Query: 586 NGGIAAAFDEIPYAKLL---IGQH-----CSKYTMVEPTFKTAGFGFAFPLHSPLVHDVS 637
GIA + YA LL + ++ C+ T + T G+G PL SP +++
Sbjct: 680 EEGIARVLNS-KYAFLLESTMNEYHRRLNCN-LTQIGGLLDTKGYGIGMPLGSPFRDEIT 737
Query: 638 KAILNVTEGDKMKEIEDAWFK 658
IL + E ++++ ++ W++
Sbjct: 738 LGILQLQENNRLEILKRRWWE 758
Score = 71 (30.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 60/267 (22%), Positives = 111/267 (41%)
Query: 11 AITAIIKAFGWREAVPIYVDNQYG---EELIPSLTDALQAIDTRVPYRSVISPLATDDQI 67
AI AI+++FG+ A I + EEL+ + + + R+ + + P +I
Sbjct: 122 AIGAILRSFGYPTASLICAKAECLLRLEELVRHFLISRETLSVRMLDEN-LDPTPLLKEI 180
Query: 68 EKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSV 127
+ K+ T+ I+ S+ I +KA+E+G+ + +I+T LLR L+ V
Sbjct: 181 RDD--KVATI-----IIDANASVSILILKKASELGMTSAFYKYILTTMDFPLLR-LDDVV 232
Query: 128 TDSMQGVIGV------RPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDAT 181
D ++G P+ + + + + W R+ +P A + L +DA
Sbjct: 233 NDQ-SNIVGFSMLNNSHPFY--LEFIRSLNLSW-REGCDLSPYPGPA---LSSALMFDAV 285
Query: 182 SALAVAVEKAGITG-FGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF 240
+ AV + + G + +S+ I Q+G L+ L + + GLTG F
Sbjct: 286 HVVVGAVRELNRSQEIGVKPLSCTSSL-------IWQHGTSLMNYLRMVEYDGLTGRVEF 338
Query: 241 VD-GQLQSSAFEIIN-VNNGARGVGFW 265
GQ + I+ G + +G W
Sbjct: 339 NSKGQRTNYTLRILEKFKGGHKEIGVW 365
>UNIPROTKB|F1MLZ9 [details] [associations]
symbol:GRIN2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0051930 "regulation of sensory
perception of pain" evidence=IEA] [GO:0048167 "regulation of
synaptic plasticity" evidence=IEA] [GO:0045471 "response to
ethanol" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042428 "serotonin metabolic process" evidence=IEA] [GO:0042417
"dopamine metabolic process" evidence=IEA] [GO:0042177 "negative
regulation of protein catabolic process" evidence=IEA] [GO:0033058
"directional locomotion" evidence=IEA] [GO:0030431 "sleep"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0019233
"sensory perception of pain" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0009611 "response to
wounding" evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007613
"memory" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IEA] [GO:0001975 "response to
amphetamine" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0048167
GO:GO:0014069 GO:GO:0009986 GO:GO:0008104 GO:GO:0009611
GO:GO:0022008 GO:GO:0042493 GO:GO:0045471 GO:GO:0007613
GO:GO:0019233 GO:GO:0030431 GO:GO:0005262 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0008542
GO:GO:0060079 GO:GO:0042734 GO:GO:0001975 GO:GO:0030288
GO:GO:0043065 GO:GO:0042177 GO:GO:0042417 GO:GO:0042428
GO:GO:0001964 GO:GO:0017146 GO:GO:0005234 GO:GO:0004972 OMA:CRSCLSN
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:DAAA02057431 IPI:IPI00715468
Ensembl:ENSBTAT00000010376 Uniprot:F1MLZ9
Length = 1091
Score = 178 (67.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 60/249 (24%), Positives = 114/249 (45%)
Query: 304 PTNEKKLRVGVPVKKGFSDFVKV---TIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDF 360
P E +R VP +K FVK+ T + + G+ ID+ K + + +
Sbjct: 51 PLTETCVRNTVPCRK----FVKINNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYL 106
Query: 361 VPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPI 420
V + + +N +I +V VG TI RS VDF++P+ E+G+S++V
Sbjct: 107 VTNGKHGKKVNNVWNGMIGEVVYHRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVS- 165
Query: 421 KDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFV-VWVLEH----RVNEDF-RGPARH--- 471
+ + + FL+P + +WV + + + V+V E+ N + +G A H
Sbjct: 166 RSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPS 225
Query: 472 -QVGTSFWFSFSTMVFSQRERVIS---NLARFVVIVWCFVVLILIQSYTASLTSLLTVDQ 527
+G + W + +VF+ V + ++ +V VW F +I + SYTA+L + + ++
Sbjct: 226 FTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE 284
Query: 528 LQPTITDVN 536
+T ++
Sbjct: 285 FVDQVTGLS 293
>ZFIN|ZDB-GENE-070822-3 [details] [associations]
symbol:grin2ca "glutamate receptor, ionotropic,
N-methyl D-aspartate 2Ca" species:7955 "Danio rerio" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-070822-3 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:BX546473 EMBL:CU464067
IPI:IPI00932733 RefSeq:XP_002661175.2 Ensembl:ENSDART00000110554
Ensembl:ENSDART00000145215 GeneID:100329743 KEGG:dre:100329743
Uniprot:E7FH62
Length = 1400
Score = 182 (69.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 54/213 (25%), Positives = 102/213 (47%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFN 398
G+ ID+ K + + ++ V + G +N +I +VF D +G TI
Sbjct: 466 GFCIDILKKLSRNIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEE 525
Query: 399 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSG--CFFIFIGFVVWV 456
RS +DF++P+ E+G+S++V + + + FL+P + +WV C + + V+V
Sbjct: 526 RSEIIDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPAVWVMMFVMCLTV-VAVTVFV 583
Query: 457 LEH----RVN------EDFRGPARHQVGTSFWFSFSTMVFSQR---ERVISNLARFVVIV 503
E+ N +D GP +G S W + +VF+ E ++ +V+V
Sbjct: 584 FEYCSPVGYNRSLVSAKDPGGPT-FTIGKSVWLLWG-IVFNNSVPIENPKGTTSKIMVLV 641
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
W F +I + SYTA+L + + +Q T++ ++
Sbjct: 642 WAFFAVIFLASYTANLAAFMIQEQYIDTVSGLS 674
Score = 49 (22.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 77 MQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
+ +V +++ +F A E+GL+ G +W +
Sbjct: 229 IDAQVLLVYCSHDEAQYLFSMAREVGLVGPGYIWFI 264
>RGD|68366 [details] [associations]
symbol:Grid1 "glutamate receptor, ionotropic, delta 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918
Pfam:PF01094 RGD:68366 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 CTD:2894 eggNOG:NOG276334
HOVERGEN:HBG051840 KO:K05206 EMBL:U08255 EMBL:Z17238 IPI:IPI00207091
RefSeq:NP_077354.1 UniGene:Rn.10040 ProteinModelPortal:Q62640
SMR:Q62640 MINT:MINT-257777 STRING:Q62640 PhosphoSite:Q62640
PRIDE:Q62640 GeneID:79219 KEGG:rno:79219 UCSC:RGD:68366
ChEMBL:CHEMBL1681629 NextBio:614636 Genevestigator:Q62640
Uniprot:Q62640
Length = 1009
Score = 177 (67.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 87/382 (22%), Positives = 155/382 (40%)
Query: 323 FVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGT-----SSGSYNDL 377
FV V + Q G+SIDV A+ + L + Y+ Y PDG + S+N +
Sbjct: 449 FVMVAENILGQPKRYKGFSIDVLDALAKALGFK--YEI--YQAPDGRYGHQLHNTSWNGM 504
Query: 378 IYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTW 437
I ++ D + TI R + VDF+ Y + V +++ K +K + + P +
Sbjct: 505 IGELISKRADLAISAITITPERESVVDFSKRYMDYSVGILIK-KPEEKISIFSLFAPFDF 563
Query: 438 DLWVTSGCFFIFIGFVVWVLEH--RVNEDF----RGPARHQVGTSFWFSFSTMVFSQRER 491
+W +G +++VL V R A + ++ W + V E
Sbjct: 564 AVWACIAAAIPVVGVLIFVLNRIQAVRSQSATQPRPSASATLHSAIWIVYGAFVQQGGES 623
Query: 492 VISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQK 549
++++A R V+ W LI+ SYTA+L + LTV ++ + L K+ + + G +
Sbjct: 624 SVNSVAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDSPVRTFQDLSKQLEMSYGTVR 683
Query: 550 GSFVLGILKQLG---------FDE--RKLVVYNSHEECDELFQKG---SANGGIAAAFD- 594
S V + G F E R + + C +G + G A +D
Sbjct: 684 DSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGGADNCVSNPSEGIRKAKKGNYAFLWDV 743
Query: 595 EIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIED 654
+ L CS T++ + + G+G A SP S+ IL + + + ++
Sbjct: 744 AVVEYAALTDDDCS-VTVIGNSISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQ 802
Query: 655 AWFKKHSSCPDAGTVVSARSLG 676
W+ C D + SA++ G
Sbjct: 803 KWWPHTGRC-DLTSHSSAQTDG 823
>UNIPROTKB|E1BK87 [details] [associations]
symbol:GRIN3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043005 "neuron projection" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016358 "dendrite development" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0045471
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0016358 GO:GO:0035235 GO:GO:0043005 GO:GO:0060134
GO:GO:0030288 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 OMA:QSQGEMM GO:GO:0004972
EMBL:DAAA02024314 EMBL:DAAA02024315 EMBL:DAAA02024316
EMBL:DAAA02024317 IPI:IPI00698607 Ensembl:ENSBTAT00000024549
Uniprot:E1BK87
Length = 1137
Score = 165 (63.1 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 76/365 (20%), Positives = 149/365 (40%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGT----SSGSYNDLIYQVFLGEFDAVVGDTT 394
GY ID+ + + E++ + DF Y DG +G + L+ + G V +
Sbjct: 578 GYCIDLLEKLAEDMNF----DFDLYIVGDGKYGAWKNGHWTGLVGDLLSGSAHLAVTSFS 633
Query: 395 IVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVV 454
I RS +DFT P+ + + ++V +D+ F+ PL W +W+ G F +
Sbjct: 634 INTARSQVIDFTSPFFSTSLGILVRTRDTAAPIG-AFMWPLHWTMWL--GIFVALHITAI 690
Query: 455 WVLEHRVNEDFRGPARHQVGTSFWFSFST-------MVFSQRERVISN---LARFVVIVW 504
++ + F G S FSFS+ ++F + + RF++ +W
Sbjct: 691 FLTLYEWKSPF-GMTPKGRNRSKVFSFSSALNVCYALLFGRTAAIKPPKCWTGRFLMNLW 749
Query: 505 CFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKG----SFVLGILKQL 560
+ + +YTA+L +++ +++ ++ ++ + G++ G S ++Q
Sbjct: 750 AIFCMFCLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQ- 808
Query: 561 GFDERKLVV--YNSHEECDEL-FQKGSANGGIAAAFDE--IPYAKLLIGQHCSKYTMVEP 615
F E + YN D + + K A D+ + Y ++ + C T+ +P
Sbjct: 809 SFPEMHEYMRRYNVPATLDGVAYLKNDPEKLDAFIMDKALLDY-EVSVDADCKLLTVGKP 867
Query: 616 TFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSL 675
F G+G P +SP ++S+ I M + D W+K + V +
Sbjct: 868 -FAIEGYGIGLPPNSPFTSNISELISQYKSHGFMDVLHDKWYKVVPCGKRSFAVTETLQM 926
Query: 676 GLNSF 680
G+ F
Sbjct: 927 GIKHF 931
Score = 66 (28.3 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 28/99 (28%), Positives = 44/99 (44%)
Query: 171 NIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIR 230
++F DA +A AV A + + N D+E ++ +G L + L++
Sbjct: 383 SVFEYYVQDAMELVARAVATATMIQPELALIPSTVNCMDVETANLT-SGQYLSRFLANTT 441
Query: 231 FRGLTGDYIFVDGQLQSSA---FEIINVNNGARGVGFWS 266
FRGL+G I V G S+ F I N+ N G W+
Sbjct: 442 FRGLSGS-IKVKGSTIISSENNFFIWNLQNDPMGKPMWT 479
Score = 44 (20.5 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 93 RIFEKANEIGLMNKGCVWIMTDGMT-NLLRT 122
RIFE + G+M W++ D LRT
Sbjct: 337 RIFEITTQFGVMLPELRWVLGDSQNVEKLRT 367
>UNIPROTKB|Q14957 [details] [associations]
symbol:GRIN2C "Glutamate receptor ionotropic, NMDA 2C"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0009611
"response to wounding" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0033058 "directional locomotion"
evidence=IEA] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005737 GO:GO:0014069
GO:GO:0008104 GO:GO:0005887 GO:GO:0009611 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0050885 GO:GO:0060079
DrugBank:DB00142 GO:GO:0030288 GO:GO:0005261 EMBL:AC068874
GO:GO:0042177 DrugBank:DB00145 InterPro:IPR001828 DrugBank:DB00836
GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132 GO:GO:0004972
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565 EMBL:L76224
EMBL:BC140801 IPI:IPI00215887 RefSeq:NP_000826.2 UniGene:Hs.436980
ProteinModelPortal:Q14957 SMR:Q14957 MINT:MINT-1776011
STRING:Q14957 TCDB:1.A.10.1.3 PhosphoSite:Q14957 DMDM:215274091
PaxDb:Q14957 PRIDE:Q14957 Ensembl:ENST00000293190 GeneID:2905
KEGG:hsa:2905 UCSC:uc002jlt.1 CTD:2905 GeneCards:GC17M072854
H-InvDB:HIX0039170 HGNC:HGNC:4587 HPA:HPA041666 MIM:138254
neXtProt:NX_Q14957 PharmGKB:PA28981 HOVERGEN:HBG052636
InParanoid:Q14957 KO:K05211 OMA:CTWRRIS OrthoDB:EOG42RD6M
PhylomeDB:Q14957 BindingDB:Q14957 ChEMBL:CHEMBL4109 GenomeRNAi:2905
NextBio:11503 ArrayExpress:Q14957 Bgee:Q14957 CleanEx:HS_GRIN2C
Genevestigator:Q14957 GermOnline:ENSG00000161509 Uniprot:Q14957
Length = 1233
Score = 184 (69.8 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 53/213 (24%), Positives = 104/213 (48%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFN 398
G+ ID+ K + + ++ V + G +N +I +V+ D +G TI
Sbjct: 456 GFCIDILKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 515
Query: 399 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSG--CFFIFIGFVVWV 456
RS VDF++P+ E+G+S++V + + + FL+P + +WV C + + V++
Sbjct: 516 RSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPAVWVMMFVMCLTV-VAITVFM 573
Query: 457 LEH----RVNEDFR------GPARHQVGTSFWFSFSTMVFSQR---ERVISNLARFVVIV 503
E+ N++ GPA +G S W ++ +VF+ E ++ +V+V
Sbjct: 574 FEYFSPVSYNQNLTRGKKSGGPA-FTIGKSVWLLWA-LVFNNSVPIENPRGTTSKIMVLV 631
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
W F +I + SYTA+L + + +Q T++ ++
Sbjct: 632 WAFFAVIFLASYTANLAAFMIQEQYIDTVSGLS 664
Score = 45 (20.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 81 VFILHMLPSLGSRIFEKANEIGLMNKGCVWIM 112
VF+ + +F +A + GL+ G VW++
Sbjct: 223 VFVAYCSREEAEVLFAEAAQAGLVGPGHVWLV 254
>WB|WBGene00003774 [details] [associations]
symbol:nmr-1 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0043059 "regulation of forward locomotion"
evidence=IMP] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0045202 "synapse" evidence=IDA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 Pfam:PF01094 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0043005 GO:GO:0045202
GO:GO:0007626 GO:GO:0030288 InterPro:IPR001828 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 EMBL:FO081043 GO:GO:0005234
GeneTree:ENSGT00700000104113 GO:GO:0004972 KO:K05208 OMA:WLEMLSH
HSSP:Q05586 GO:GO:0043059 EMBL:AF318613 PIR:T15967
RefSeq:NP_495033.2 UniGene:Cel.9184 ProteinModelPortal:G5EGQ9
SMR:G5EGQ9 EnsemblMetazoa:F07F6.6.1 EnsemblMetazoa:F07F6.6.2
GeneID:173929 KEGG:cel:CELE_F07F6.6 CTD:173929 WormBase:F07F6.6
NextBio:881705 Uniprot:G5EGQ9
Length = 1025
Score = 137 (53.3 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 47/195 (24%), Positives = 84/195 (43%)
Query: 474 GTSFWFSFSTMVFS--QRERVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPT 531
G + WF + ++ S + S AR + IVWC +I++ SYTA+L + L +DQ +
Sbjct: 625 GEAMWFVWGVLLNSGVSEKTPRSCSARVLGIVWCGFCMIMVASYTANLAAFLVLDQPEKG 684
Query: 532 ITDVNLLIKRGDNVGYQKG----SFVLGILK---QLGFDERKLVVYNSHEECDELFQKGS 584
+T V R + + G S V K +L RK+ +N + +
Sbjct: 685 LTGVTDPRLRNPSANFSFGTVLNSNVYQYFKRHVELSSMFRKMEPHNVRRASEAVHSL-- 742
Query: 585 ANGGIAAAFDEIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVT 644
NG + A + + +HC T F + +G +SP ++ AIL ++
Sbjct: 743 LNGSLDAFIWDSTRLEFEAARHCELRTRGS-LFGRSAYGIGLQKNSPWTPHITSAILRMS 801
Query: 645 EGDKMKEIEDAWFKK 659
E M++++ W +
Sbjct: 802 ESGVMEKLDQKWIDR 816
Score = 91 (37.1 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 387 DAVVGDTTIVFNRSNYVDFTLPYTESGVSMI---VPIKDSKKRNAWVFLQPLTWDLWVTS 443
D +G TI R VDFT P+ G+ ++ +P +DS ++ FLQPL LW
Sbjct: 517 DMAIGGITINPERERIVDFTEPWLYHGIRILEKNIP-RDSPMQS---FLQPLQSSLWTAL 572
Query: 444 GCFFIFIGFVVWVLEHR 460
I +G ++ L+ +
Sbjct: 573 FISVILVGLAIYCLDFK 589
Score = 45 (20.9 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 16/68 (23%), Positives = 31/68 (45%)
Query: 51 RVPYRSVIS---PLATDDQIEKELYKLFTMQT-RVFILHMLPSLGSRIFEKANEIGLMNK 106
RV ++ ++ + ++ + L + F T + +L RIF A + L K
Sbjct: 193 RVEFKIIVQRYIEVELNENLNDTLAESFEEVTSNIIVLFAKKDDAVRIFANAGD--LTGK 250
Query: 107 GCVWIMTD 114
G VWI+++
Sbjct: 251 GKVWIVSE 258
>MGI|MGI:95812 [details] [associations]
symbol:Grid1 "glutamate receptor, ionotropic, delta 1"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95812 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
EMBL:CH466573 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 CTD:2894 eggNOG:NOG276334
HOGENOM:HOG000264260 HOVERGEN:HBG051840 KO:K05206 OMA:LLPWICQ
EMBL:D10171 EMBL:AK138279 EMBL:CT009532 EMBL:AC114572 EMBL:AC154388
EMBL:AC154730 EMBL:AC163280 EMBL:AC169510 EMBL:CT030647
IPI:IPI00123542 PIR:JH0266 RefSeq:NP_032192.2 UniGene:Mm.121569
UniGene:Mm.413604 ProteinModelPortal:Q61627 SMR:Q61627
MINT:MINT-1791814 STRING:Q61627 PhosphoSite:Q61627 PaxDb:Q61627
PRIDE:Q61627 DNASU:14803 Ensembl:ENSMUST00000043349 GeneID:14803
KEGG:mmu:14803 InParanoid:Q3UUL5 OrthoDB:EOG4ZCT3V ChiTaRS:GRID1
NextBio:286969 Bgee:Q61627 CleanEx:MM_GRID1 Genevestigator:Q61627
Uniprot:Q61627
Length = 1009
Score = 175 (66.7 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 84/369 (22%), Positives = 148/369 (40%)
Query: 323 FVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGT-----SSGSYNDL 377
FV V + Q G+SIDV A+ + L + Y+ Y PDG + S+N +
Sbjct: 449 FVMVAENILGQPKRYKGFSIDVLDALAKALGFK--YEI--YQAPDGRYGHQLHNTSWNGM 504
Query: 378 IYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTW 437
I ++ D + TI R + VDF+ Y + V +++ K +K + + P +
Sbjct: 505 IGELISKRADLAISAITITPERESVVDFSKRYMDYSVGILIK-KPEEKISIFSLFAPFDF 563
Query: 438 DLWVTSGCFFIFIGFVVWVLEH--RVNEDF----RGPARHQVGTSFWFSFSTMVFSQRER 491
+W +G +++VL V R A + ++ W + V E
Sbjct: 564 AVWACIAAAIPVVGVLIFVLNRIQAVRSQSATQPRPSASATLHSAIWIVYGAFVQQGGES 623
Query: 492 VISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGD-NVGYQK 549
++++A R V+ W LI+ SYTA+L + LTV ++ I L K+ + + G +
Sbjct: 624 SVNSVAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQLEMSYGTVR 683
Query: 550 GSFVLGILKQLG---------FDE--RKLVVYNSHEECDELFQKG---SANGGIAAAFD- 594
S V + G F E R + + C +G + G A +D
Sbjct: 684 DSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGGADNCVSNPSEGIRKAKKGNYAFLWDV 743
Query: 595 EIPYAKLLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIED 654
+ L CS T++ + + G+G A SP S+ IL + + + ++
Sbjct: 744 AVVEYAALTDDDCS-VTVIGNSISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQ 802
Query: 655 AWFKKHSSC 663
W+ C
Sbjct: 803 KWWPHTGRC 811
>UNIPROTKB|I3L657 [details] [associations]
symbol:LOC100739538 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00918
GO:GO:0016020 GO:GO:0035235 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 EMBL:CT990546
Ensembl:ENSSSCT00000023074 OMA:TSIRETV Uniprot:I3L657
Length = 237
Score = 160 (61.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 56/222 (25%), Positives = 97/222 (43%)
Query: 323 FVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGT-----SSGSYNDL 377
FV V + Q G+SIDV A+ + L + Y+ Y PDG + S+N +
Sbjct: 20 FVMVAENILGQPKRYKGFSIDVLDALAKALGFK--YEI--YQAPDGRYGHQLHNTSWNGM 75
Query: 378 IYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTW 437
I ++ D + TI R + VDF+ Y + V +++ K +K + + P +
Sbjct: 76 IGELISKRADLAISAITITPERESVVDFSKRYMDYSVGILIR-KPEEKISIFSLFAPFDF 134
Query: 438 DLWVTSGCFFIFIGFVVWVLEH----RVNEDF--RGPARHQVGTSFWFSFSTMVFSQRER 491
+W +G +++VL R R A + ++ W + V E
Sbjct: 135 AVWACIAAAIPVVGVLIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGES 194
Query: 492 VISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTI 532
++++A R V+ W LI+ SYTA+L + LTV ++ I
Sbjct: 195 SVNSMAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPI 236
>UNIPROTKB|J9P9T9 [details] [associations]
symbol:GRIN2C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 EMBL:AAEX03006305
EMBL:AAEX03006306 Ensembl:ENSCAFT00000044880 Uniprot:J9P9T9
Length = 1180
Score = 184 (69.8 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 52/213 (24%), Positives = 105/213 (49%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFN 398
G+ ID+ K + + + ++ V + G +N +I +V+ D +G TI
Sbjct: 455 GFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYQRADMAIGSLTINEE 514
Query: 399 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSG--CFFIFIGFVVWV 456
RS VDF++P+ E+G+S++V + + + FL+P + +WV C + + V++
Sbjct: 515 RSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPSVWVMMFVMCLTV-VAITVFM 572
Query: 457 LEH----RVNEDFR------GPARHQVGTSFWFSFSTMVFSQR---ERVISNLARFVVIV 503
E+ N++ GP+ +G S W ++ +VF+ E ++ +V+V
Sbjct: 573 FEYFSPVSYNQNLTSGKKSGGPS-FTIGKSVWLLWA-LVFNNSVPIENPRGTTSKIMVLV 630
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
W F +I + SYTA+L + + +Q T++ ++
Sbjct: 631 WAFFAVIFLASYTANLAAFMIQEQYIDTVSGLS 663
Score = 42 (19.8 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 94 IFEKANEIGLMNKGCVWIM 112
+F +A + GL+ G VW++
Sbjct: 236 LFAEAAQAGLVGPGHVWLV 254
>UNIPROTKB|E2RG96 [details] [associations]
symbol:GRIN2C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 OMA:CTWRRIS
EMBL:AAEX03006305 EMBL:AAEX03006306 Ensembl:ENSCAFT00000007441
Uniprot:E2RG96
Length = 1220
Score = 184 (69.8 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 52/213 (24%), Positives = 105/213 (49%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFN 398
G+ ID+ K + + + ++ V + G +N +I +V+ D +G TI
Sbjct: 456 GFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYQRADMAIGSLTINEE 515
Query: 399 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSG--CFFIFIGFVVWV 456
RS VDF++P+ E+G+S++V + + + FL+P + +WV C + + V++
Sbjct: 516 RSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPSVWVMMFVMCLTV-VAITVFM 573
Query: 457 LEH----RVNEDFR------GPARHQVGTSFWFSFSTMVFSQR---ERVISNLARFVVIV 503
E+ N++ GP+ +G S W ++ +VF+ E ++ +V+V
Sbjct: 574 FEYFSPVSYNQNLTSGKKSGGPS-FTIGKSVWLLWA-LVFNNSVPIENPRGTTSKIMVLV 631
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
W F +I + SYTA+L + + +Q T++ ++
Sbjct: 632 WAFFAVIFLASYTANLAAFMIQEQYIDTVSGLS 664
Score = 42 (19.8 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 94 IFEKANEIGLMNKGCVWIM 112
+F +A + GL+ G VW++
Sbjct: 236 LFAEAAQAGLVGPGHVWLV 254
>ZFIN|ZDB-GENE-070424-129 [details] [associations]
symbol:grin2aa "glutamate receptor, ionotropic,
N-methyl D-aspartate 2A, a" species:7955 "Danio rerio" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070424-129
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 HOVERGEN:HBG052635 OrthoDB:EOG4X0MRG
InterPro:IPR018884 Pfam:PF10565 GeneTree:ENSGT00540000070221
HOGENOM:HOG000113802 EMBL:CR954963 EMBL:BX908803 IPI:IPI00494319
Ensembl:ENSDART00000073979 Ensembl:ENSDART00000142141
Uniprot:F1QZC7
Length = 1460
Score = 167 (63.8 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 54/242 (22%), Positives = 109/242 (45%)
Query: 310 LRVGVPVKKGFSDFVKVTIDPKTQ-ETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDG 368
+R VP +K D T T + G+ ID+ K + + + V +
Sbjct: 427 MRNSVPCRKHIKD--NTTEGGGTYIKKCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGK 484
Query: 369 TSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNA 428
+ +N ++ +V + VG TI RS +DF++P+ E+G+S++V + + +
Sbjct: 485 KINNVWNGMVGEVVNKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVS-RSNGTVSP 543
Query: 429 WVFLQPLTWDLWVTSGCFFIFI-GFVVWVLEH----------RVNEDFRGPARHQVGTSF 477
FL+P + +WV + + V++ E+ +D GP+ +G +
Sbjct: 544 SAFLEPFSASVWVMMFVMLLLVTAMAVFMFEYISPLGFNRNLAQGKDPHGPS-FTMGKAV 602
Query: 478 WFSFSTMVFSQRERVIS---NLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITD 534
W + +VF+ V + ++F+V VW F +I + SYTA+L + + ++ +T
Sbjct: 603 WLLWG-LVFNNSVPVQNPKGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTG 661
Query: 535 VN 536
++
Sbjct: 662 LS 663
Score = 61 (26.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 23/83 (27%), Positives = 40/83 (48%)
Query: 57 VISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWIMTDGM 116
+I+ A D ++ +L +Q+ V +L+ + I E+A +GL G +WI+
Sbjct: 200 IITLDAVDGDSRTQI-QLKKVQSPVVLLYCSKDEAAYILEEARSLGLTGFGYIWIVPS-- 256
Query: 117 TNLLRTLEPSVT-DSM-QGVIGV 137
L T P +T D+ G+I V
Sbjct: 257 ---LTTGNPEITPDTFPSGMISV 276
Score = 40 (19.1 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 175 LLAYDATSALAVAVEKA---GITGFGF 198
+L Y + A +E+A G+TGFG+
Sbjct: 224 VLLYCSKDEAAYILEEARSLGLTGFGY 250
>UNIPROTKB|O60391 [details] [associations]
symbol:GRIN3B "Glutamate receptor ionotropic, NMDA 3B"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISS;NAS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0005261 "cation channel
activity" evidence=ISS] [GO:0016594 "glycine binding" evidence=ISS]
[GO:0030594 "neurotransmitter receptor activity" evidence=ISS]
[GO:0042165 "neurotransmitter binding" evidence=ISS] [GO:0005262
"calcium channel activity" evidence=ISS] [GO:0043025 "neuronal cell
body" evidence=ISS] [GO:0051205 "protein insertion into membrane"
evidence=ISS] [GO:0051924 "regulation of calcium ion transport"
evidence=ISS] [GO:0007268 "synaptic transmission" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0005262 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0035235
GO:GO:0051924 DrugBank:DB00142 GO:GO:0030288 GO:GO:0005261
DrugBank:DB00145 GO:GO:0051205 EMBL:AC004528 DrugBank:DB01173
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
GO:GO:0016594 eggNOG:NOG320645 HOGENOM:HOG000231528
HOVERGEN:HBG052634 EMBL:BK000070 EMBL:BK004079 IPI:IPI00297677
RefSeq:NP_619635.1 UniGene:Hs.660378 ProteinModelPortal:O60391
SMR:O60391 STRING:O60391 PhosphoSite:O60391 PaxDb:O60391
PRIDE:O60391 Ensembl:ENST00000234389 GeneID:116444 KEGG:hsa:116444
UCSC:uc002lqo.1 CTD:116444 GeneCards:GC19P001000 HGNC:HGNC:16768
MIM:606651 neXtProt:NX_O60391 PharmGKB:PA28984 InParanoid:O60391
KO:K05214 OMA:HLQLDWA BindingDB:O60391 ChEMBL:CHEMBL2913
GenomeRNAi:116444 NextBio:79923 Bgee:O60391 CleanEx:HS_GRIN3B
Genevestigator:O60391 GermOnline:ENSG00000116032 Uniprot:O60391
Length = 1043
Score = 137 (53.3 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 49/210 (23%), Positives = 89/210 (42%)
Query: 330 PKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGT----SSGSYNDLIYQVFLGE 385
P+ GY ID+ + + E+ P+ DF Y DG G + L+ + G
Sbjct: 469 PRALRKCCYGYCIDLLERLAEDTPF----DFELYLVGDGKYGALRDGRWTGLVGDLLAGR 524
Query: 386 FDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGC 445
V +I RS VDFT P+ + + ++V +D+ F+ PL W W+
Sbjct: 525 AHMAVTSFSINSARSQVVDFTSPFFSTSLGIMVRARDTASPIG-AFMWPLHWSTWLGVFA 583
Query: 446 FFIFIGFVVWVLEHRVNEDFRGPARHQVGTSFWFSFS-TMVFSQR-ERVISN------LA 497
+ V E R R++ T F +S + + ++ R +S+
Sbjct: 584 ALHLTALFLTVYEWRSPYGLTPRGRNR-STVFSYSSALNLCYAILFRRTVSSKTPKCPTG 642
Query: 498 RFVVIVWCFVVLILIQSYTASLTSLLTVDQ 527
R ++ +W L+++ SYTA+L +++ D+
Sbjct: 643 RLLMNLWAIFCLLVLSSYTANLAAVMVGDK 672
Score = 71 (30.1 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 603 IGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFK 658
I C T+ +P F G+G P +SPL ++S+ I + + D W+K
Sbjct: 755 IDADCKLLTVGKP-FAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYK 809
Score = 63 (27.2 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 206 NATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVDGQLQ---SSAFEIINVNNGARGV 262
N DL+ G G L + L++ F+G TG ++V G Q S F++ ++ RG
Sbjct: 322 NCGDLQPAGPESPGRFLARFLANTSFQGRTGP-VWVTGSSQVHMSRHFKVWSLRRDPRGA 380
Query: 263 GFWS 266
W+
Sbjct: 381 PAWA 384
>ZFIN|ZDB-GENE-041008-124 [details] [associations]
symbol:grin2da "glutamate receptor, ionotropic,
N-methyl D-aspartate 2D, a" species:7955 "Danio rerio" [GO:0004872
"receptor activity" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-041008-124
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 GeneTree:ENSGT00540000070221
OrthoDB:EOG42RD6M EMBL:BX950852 IPI:IPI00650738
ProteinModelPortal:I3NI77 Ensembl:ENSDART00000128837 Bgee:I3NI77
Uniprot:I3NI77
Length = 1916
Score = 175 (66.7 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 79/351 (22%), Positives = 152/351 (43%)
Query: 216 SQNGPKLLQALSSIRFRGLTGDYIFV-DGQLQSSAFEIINVNNGARG---VGFWSPEKGX 271
+Q P ++ S+I G DY F DG L + ++I+ G RG VG+W E G
Sbjct: 377 TQRVPGRIRFFSNITLSGR--DYSFNNDGYLANPLLDVISYTAG-RGWEEVGWW--ENGV 431
Query: 272 XXXXXXXXXXXXXXRPIIWPGDS-------TSDPKGWEI-----PTNEKKLRVGVPVKKG 319
P + P D T + + + I P +R VP +
Sbjct: 432 LRLRYPPWSRYG---PFLKPLDDSQHLRVVTLEERPFVIVEPADPGTGSCIRDSVPCRLP 488
Query: 320 FSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIY 379
++ + V ++ + G+ IDV K + + + + V + G +N ++
Sbjct: 489 LNNSMVVE-GIQSMKHCCKGFCIDVLKRLAKIVGFTYDLYLVTNGRHGKNIDGQWNGMVG 547
Query: 380 QVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDL 439
+V D +G TI RS V+F++P+ E+G+S++V + + + FL+P + +
Sbjct: 548 EVVSKRADMAIGSLTINEERSEVVEFSVPFVETGISVMVS-RSNGTVSPSAFLEPYSPAV 606
Query: 440 WVTSG--CFFIFIGFVVWVLEH----RVNEDFR-----GPARHQVGTSFWFSFSTMVFSQ 488
WV C + + V++ E N + G ++ +G S W ++ +VF+
Sbjct: 607 WVMMFVMCLSV-VAVTVFIFEFFSPVGYNRSLQSGKTAGGSKFTIGKSIWLLWA-LVFNN 664
Query: 489 R---ERVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
E ++ +V+VW F +I + SYTA+L + + ++ T++ ++
Sbjct: 665 SVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLS 715
>MGI|MGI:95822 [details] [associations]
symbol:Grin2c "glutamate receptor, ionotropic, NMDA2C (epsilon
3)" species:10090 "Mus musculus" [GO:0001964 "startle response"
evidence=IMP] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IGI;IMP] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006812 "cation transport" evidence=IMP]
[GO:0008104 "protein localization" evidence=IGI;IMP] [GO:0009611
"response to wounding" evidence=IGI] [GO:0014069 "postsynaptic
density" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO;IPI] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0033058
"directional locomotion" evidence=IGI] [GO:0034220 "ion
transmembrane transport" evidence=IMP] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI;IMP]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=IGI] [GO:0042391 "regulation of membrane potential"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0060079 "regulation
of excitatory postsynaptic membrane potential" evidence=IGI;IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95822 GO:GO:0005737
GO:GO:0014069 GO:GO:0008104 GO:GO:0009611 GO:GO:0030054
GO:GO:0045211 GO:GO:0050885 GO:GO:0060079 GO:GO:0005261
GO:GO:0042177 InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0004972 GO:GO:0033058 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 CTD:2905
HOVERGEN:HBG052636 KO:K05211 OMA:CTWRRIS OrthoDB:EOG42RD6M
EMBL:D10694 IPI:IPI00321321 PIR:I49705 RefSeq:NP_034480.2
UniGene:Mm.39090 ProteinModelPortal:Q01098 SMR:Q01098 IntAct:Q01098
MINT:MINT-104161 STRING:Q01098 PhosphoSite:Q01098 PaxDb:Q01098
PRIDE:Q01098 Ensembl:ENSMUST00000003351 Ensembl:ENSMUST00000106554
GeneID:14813 KEGG:mmu:14813 HOGENOM:HOG000231061 InParanoid:Q01098
BindingDB:Q01098 ChEMBL:CHEMBL3555 NextBio:287007 Bgee:Q01098
Genevestigator:Q01098 GermOnline:ENSMUSG00000020734 Uniprot:Q01098
Length = 1239
Score = 182 (69.1 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 57/239 (23%), Positives = 115/239 (48%)
Query: 314 VPVKKGFSD-FVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSG 372
VP ++ + F I P T+ G+ ID+ K + + + ++ V + G
Sbjct: 431 VPCRRQSNHTFSSGDITPYTK-LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRG 489
Query: 373 SYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFL 432
+N +I +V+ D +G TI RS +DF++P+ E+G+S++V + + + FL
Sbjct: 490 VWNGMIGEVYYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVA-RSNGTVSPSAFL 548
Query: 433 QPLTWDLWVTSG--CFFIFIGFVVWVLEH----RVNEDFR------GPARHQVGTSFWFS 480
+P + +WV C + + V++ E+ N++ GP+ +G S W
Sbjct: 549 EPYSPAVWVMMFVMCLTV-VAITVFMFEYFSPVSYNQNLTKGKKSGGPS-FTIGKSVWLL 606
Query: 481 FSTMVFSQR---ERVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
++ +VF+ E ++ +V+VW F +I + SYTA+L + + +Q T++ ++
Sbjct: 607 WA-LVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLS 664
Score = 42 (19.8 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 94 IFEKANEIGLMNKGCVWIM 112
+F +A + GL+ G VW++
Sbjct: 236 LFAEAAQAGLVGPGHVWLV 254
>UNIPROTKB|Q16478 [details] [associations]
symbol:GRIK5 "Glutamate receptor ionotropic, kainate 5"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0006621 "protein
retention in ER lumen" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0017124 "SH3 domain binding"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043113 "receptor clustering" evidence=IEA] [GO:0043195
"terminal bouton" evidence=IEA] [GO:0043204 "perikaryon"
evidence=IEA] [GO:0043525 "positive regulation of neuron apoptotic
process" evidence=IEA] [GO:0051649 "establishment of localization
in cell" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0071333
"cellular response to glucose stimulus" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=NAS;TAS] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0071333 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0030425 GO:GO:0043204 GO:GO:0060079
GO:GO:0042734 GO:GO:0043195 GO:GO:0035249 EMBL:CH471126
DrugBank:DB00142 GO:GO:0043113 GO:GO:0051649 GO:GO:0006621
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983
CleanEx:HS_GRIK2 EMBL:S40369 EMBL:AJ249209 IPI:IPI00103335
IPI:IPI00293288 PIR:I57936 RefSeq:NP_002079.3 UniGene:Hs.367799
ProteinModelPortal:Q16478 SMR:Q16478 IntAct:Q16478
MINT:MINT-1427286 STRING:Q16478 PhosphoSite:Q16478 DMDM:209572626
PRIDE:Q16478 DNASU:2901 Ensembl:ENST00000262895
Ensembl:ENST00000301218 GeneID:2901 KEGG:hsa:2901 UCSC:uc002osi.1
CTD:2901 GeneCards:GC19M042502 H-InvDB:HIX0022359
H-InvDB:HIX0027521 HGNC:HGNC:4583 MIM:600283 neXtProt:NX_Q16478
PharmGKB:PA28977 KO:K05205 OMA:NINSVME OrthoDB:EOG4RV2QP
BindingDB:Q16478 ChEMBL:CHEMBL2675 GenomeRNAi:2901 NextBio:11483
Bgee:Q16478 CleanEx:HS_GRIK5 Genevestigator:Q16478
GermOnline:ENSG00000105737 GO:GO:0031630 Uniprot:Q16478
Length = 980
Score = 154 (59.3 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 52/225 (23%), Positives = 101/225 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
G+ +D+ + + E L + V Y P+ +GS+ ++ ++ + D V TI
Sbjct: 445 GFCVDMLRELAELLRFRYRLRLVEDGLYGAPE--PNGSWTGMVGELINRKADLAVAAFTI 502
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVW 455
R +DF+ P+ G+S++ + +K + FL P + +W+ ++ + V++
Sbjct: 503 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLF 562
Query: 456 VLEHRVNEDFRGP-----AR-------HQVGTSFWFSFSTMVFSQRERVISNLA-RFVVI 502
+ ++ P AR + +G S WF + E + L+ R V
Sbjct: 563 LAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSG 622
Query: 503 VWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGY 547
VW LI+I SYTA+L + LTV +++ + + L + N+ Y
Sbjct: 623 VWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQ-TNIEY 666
Score = 136 (52.9 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 57/224 (25%), Positives = 99/224 (44%)
Query: 470 RHQVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQL 528
++ +G S WF + E + L+ R V VW LI+I SYTA+L + LTV ++
Sbjct: 589 QYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRM 648
Query: 529 QPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNS-----HEECDELFQKG 583
+ + + L + N+ Y G+ G F + Y + +F K
Sbjct: 649 EVPVESADDLADQ-TNIEY--GTIHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVK- 703
Query: 584 SANGGIAAAFDEIPYAKLL---IGQH-----CSKYTMVEPTFKTAGFGFAFPLHSPLVHD 635
S GIA + YA LL + ++ C+ T + T G+G PL SP +
Sbjct: 704 STEEGIARVLNS-RYAFLLESTMNEYHRRLNCN-LTQIGGLLDTKGYGIGMPLGSPFRDE 761
Query: 636 VSKAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
++ AIL + E ++++ ++ W++ CP A+ LG+ +
Sbjct: 762 ITLAILQLQENNRLEILKRKWWEG-GRCPKEEDH-RAKGLGMEN 803
Score = 68 (29.0 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 43/185 (23%), Positives = 77/185 (41%)
Query: 89 SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDSMQGVIGV------RPYVP 142
S+ I KA+E+G+ + +I+T +L L+ V DS ++G P+ P
Sbjct: 221 SISHLILRKASELGMTSAFYKYILTTMDFPILH-LDGIVEDS-SNILGFSMFNTSHPFYP 278
Query: 143 KTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTN 202
+ + + + W R+ + + L A + L +DA + AV + + +
Sbjct: 279 EF--VRSLNMSW-RENCEASTYLGPA---LSAALMFDAVHVVVSAVRELNRS----QEIG 328
Query: 203 VSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNN-GAR 260
V A + I +G L+ L + + GLTG F GQ + I+ + G R
Sbjct: 329 VKPLACT--SANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHR 386
Query: 261 GVGFW 265
+G W
Sbjct: 387 EIGVW 391
>UNIPROTKB|D4A2K9 [details] [associations]
symbol:Grin2c "Glutamate receptor ionotropic, NMDA 2C"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2739
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 IPI:IPI00201739 ProteinModelPortal:D4A2K9
Ensembl:ENSRNOT00000004502 ArrayExpress:D4A2K9 Uniprot:D4A2K9
Length = 1200
Score = 181 (68.8 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 51/213 (23%), Positives = 105/213 (49%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFN 398
G+ ID+ K + + + ++ V + G +N +I +V+ D +G TI
Sbjct: 456 GFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 515
Query: 399 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSG--CFFIFIGFVVWV 456
RS +DF++P+ E+G+S++V + + + FL+P + +WV C + + V++
Sbjct: 516 RSEIIDFSVPFVETGISVMVS-RSNGTVSPSAFLEPYSPAVWVMMFVMCLTV-VAITVFM 573
Query: 457 LEH----RVNEDFR------GPARHQVGTSFWFSFSTMVFSQR---ERVISNLARFVVIV 503
E+ N++ GP+ +G S W ++ +VF+ E ++ +V+V
Sbjct: 574 FEYFSPVSYNQNLTKGKKPGGPS-FTIGKSVWLLWA-LVFNNSVPIENPRGTTSKIMVLV 631
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
W F +I + SYTA+L + + +Q T++ ++
Sbjct: 632 WAFFAVIFLASYTANLAAFMIQEQYIDTVSGLS 664
Score = 42 (19.8 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 94 IFEKANEIGLMNKGCVWIM 112
+F +A + GL+ G VW++
Sbjct: 236 LFAEAAQAGLVGPGHVWLV 254
>RGD|2739 [details] [associations]
symbol:Grin2c "glutamate receptor, ionotropic, N-methyl D-aspartate
2C" species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=ISO;IDA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel activity"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006812 "cation
transport" evidence=ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0009611 "response to wounding"
evidence=IEA;ISO] [GO:0014069 "postsynaptic density"
evidence=IEA;ISO] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0033058 "directional locomotion" evidence=IEA;ISO]
[GO:0034220 "ion transmembrane transport" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO;IDA]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=IEA;ISO] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA;ISO]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:0001964 "startle response"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2739
GO:GO:0005737 GO:GO:0014069 GO:GO:0008104 GO:GO:0009611 GO:GO:0030054
GO:GO:0045211 GO:GO:0050885 GO:GO:0060079 GO:GO:0030288 GO:GO:0005261
GO:GO:0042177 InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0004972 GO:GO:0033058 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 CTD:2905 HOVERGEN:HBG052636
KO:K05211 OrthoDB:EOG42RD6M EMBL:M91563 EMBL:D13212 IPI:IPI00326555
RefSeq:NP_036707.3 UniGene:Rn.9709 ProteinModelPortal:Q00961
SMR:Q00961 IntAct:Q00961 MINT:MINT-87425 STRING:Q00961
PhosphoSite:Q00961 PRIDE:Q00961 Ensembl:ENSRNOT00000004477
GeneID:24411 KEGG:rno:24411 InParanoid:Q00961 BindingDB:Q00961
ChEMBL:CHEMBL401 NextBio:603235 ArrayExpress:Q00961
Genevestigator:Q00961 GermOnline:ENSRNOG00000003280 Uniprot:Q00961
Length = 1237
Score = 181 (68.8 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 51/213 (23%), Positives = 105/213 (49%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFN 398
G+ ID+ K + + + ++ V + G +N +I +V+ D +G TI
Sbjct: 456 GFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 515
Query: 399 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSG--CFFIFIGFVVWV 456
RS +DF++P+ E+G+S++V + + + FL+P + +WV C + + V++
Sbjct: 516 RSEIIDFSVPFVETGISVMVS-RSNGTVSPSAFLEPYSPAVWVMMFVMCLTV-VAITVFM 573
Query: 457 LEH----RVNEDFR------GPARHQVGTSFWFSFSTMVFSQR---ERVISNLARFVVIV 503
E+ N++ GP+ +G S W ++ +VF+ E ++ +V+V
Sbjct: 574 FEYFSPVSYNQNLTKGKKPGGPS-FTIGKSVWLLWA-LVFNNSVPIENPRGTTSKIMVLV 631
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
W F +I + SYTA+L + + +Q T++ ++
Sbjct: 632 WAFFAVIFLASYTANLAAFMIQEQYIDTVSGLS 664
Score = 42 (19.8 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 94 IFEKANEIGLMNKGCVWIM 112
+F +A + GL+ G VW++
Sbjct: 236 LFAEAAQAGLVGPGHVWLV 254
>UNIPROTKB|F1N947 [details] [associations]
symbol:GRIN3A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 EMBL:AADN02074600
EMBL:AADN02074601 EMBL:AADN02074602 EMBL:AADN02074603
EMBL:AADN02074604 EMBL:AADN02074605 IPI:IPI00682164
Ensembl:ENSGALT00000025069 ArrayExpress:F1N947 Uniprot:F1N947
Length = 667
Score = 168 (64.2 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 79/364 (21%), Positives = 150/364 (41%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGT----SSGSYNDLIYQVFLGEFDAVVGDTT 394
GY ID+ + + E++ + DF Y DG +G + L+ + G V +
Sbjct: 232 GYCIDLLEKLAEDMNF----DFDLYIVGDGKYGAWKNGHWTGLVGDLLSGTAHMAVTSFS 287
Query: 395 IVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVV 454
I RS +DFT P+ + + ++V +D+ F+ PL W +W+ G F V
Sbjct: 288 INTARSQVIDFTSPFFSTSLGILVRTRDTAAPIG-AFMWPLHWTMWL--GIFVALHITAV 344
Query: 455 WVLEHRVNEDF----RGPARHQVGT-SFWFSFSTMVFSQRERVISN----LARFVVIVWC 505
++ + F +G R++V + S + + R I RF++ +W
Sbjct: 345 FLTLYEWKSPFGMTPKGRNRNKVFSFSSALNVCYAILFGRTAAIKPPKCWTGRFLMNLWA 404
Query: 506 FVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKG----SFVLGILKQLG 561
L + +YTA+L +++ +++ ++ ++ + G++ G S ++Q
Sbjct: 405 IFCLFCLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQ-S 463
Query: 562 FDERKLVV--YNSHEECDEL-FQKGSANGGIAAAFDE--IPYAKLLIGQHCSKYTMVEPT 616
F E + YN D + + K A D+ + Y ++ I C T+ +P
Sbjct: 464 FPEMHEYMRRYNVPATPDGVAYLKNDPEKLDAFIMDKALLDY-EVSIDADCKLLTVGKP- 521
Query: 617 FKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLG 676
F G+G P +SPL ++S+ I M + D W+K + V +G
Sbjct: 522 FAIEGYGIGLPPNSPLTSNISELISQYKSHGFMDVLHDKWYKVVPCGKRSFAVTETLQMG 581
Query: 677 LNSF 680
+ F
Sbjct: 582 IKHF 585
>UNIPROTKB|Q38PU0 [details] [associations]
symbol:GRIK5 "KA2" species:9541 "Macaca fascicularis"
[GO:0005622 "intracellular" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 GO:GO:0043197
GO:GO:0035235 GO:GO:0005622 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 EMBL:DQ159937
ProteinModelPortal:Q38PU0 Uniprot:Q38PU0
Length = 891
Score = 154 (59.3 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 52/225 (23%), Positives = 101/225 (44%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVP---YAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTI 395
G+ +D+ + + E L + V Y P+ +GS+ ++ ++ + D V TI
Sbjct: 445 GFCVDMLRELAELLRFRYRLRLVEDGLYGAPE--PNGSWTGMVGELINRKADLAVAAFTI 502
Query: 396 VFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVW 455
R +DF+ P+ G+S++ + +K + FL P + +W+ ++ + V++
Sbjct: 503 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLF 562
Query: 456 VLEHRVNEDFRGP-----AR-------HQVGTSFWFSFSTMVFSQRERVISNLA-RFVVI 502
+ ++ P AR + +G S WF + E + L+ R V
Sbjct: 563 LAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSG 622
Query: 503 VWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGY 547
VW LI+I SYTA+L + LTV +++ + + L + N+ Y
Sbjct: 623 VWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQ-TNIEY 666
Score = 136 (52.9 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 57/224 (25%), Positives = 99/224 (44%)
Query: 470 RHQVGTSFWFSFSTMVFSQRERVISNLA-RFVVIVWCFVVLILIQSYTASLTSLLTVDQL 528
++ +G S WF + E + L+ R V VW LI+I SYTA+L + LTV ++
Sbjct: 589 QYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRM 648
Query: 529 QPTITDVNLLIKRGDNVGYQKGSFVLGILKQLGFDERKLVVYNS-----HEECDELFQKG 583
+ + + L + N+ Y G+ G F + Y + +F K
Sbjct: 649 EVPVESADDLADQ-TNIEY--GTIHAGSTMTF-FQNSRYQTYQRMWNYMQSKQPSVFVK- 703
Query: 584 SANGGIAAAFDEIPYAKLL---IGQH-----CSKYTMVEPTFKTAGFGFAFPLHSPLVHD 635
S GIA + YA LL + ++ C+ T + T G+G PL SP +
Sbjct: 704 STEEGIARVLNS-RYAFLLESTMNEYHRRLNCN-LTQIGGLLDTKGYGIGMPLGSPFRDE 761
Query: 636 VSKAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSLGLNS 679
++ AIL + E ++++ ++ W++ CP A+ LG+ +
Sbjct: 762 ITLAILQLQENNRLEILKRKWWEG-GRCPKEEDH-RAKGLGMEN 803
Score = 66 (28.3 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 43/181 (23%), Positives = 72/181 (39%)
Query: 89 SLGSRIFEKANEIGLMNKGCVWIMTDGMTNLLRTLEPSVTDSMQGVIGVRPYVPKTKALE 148
S+ I KA+E+G+ + +I+T +L L+ V DS ++G +
Sbjct: 221 SISHLILRKASELGMTSAFYKYILTTMDFPILH-LDGIVEDS-SNILGFSMFNTSHPFYP 278
Query: 149 NFRVRWKRKFLQEN--PSLFDAELNIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSN 206
F VR +EN S + + L +DA + AV + + + V
Sbjct: 279 EF-VRSLNMSWRENCEASTYPGPA-LSAALMFDAVHVVVSAVRELNRS----QEIGVKPL 332
Query: 207 ATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIFVD-GQLQSSAFEIINVNN-GARGVGF 264
A + I +G L+ L + + GLTG F GQ + I+ + G R +G
Sbjct: 333 ACT--SANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGV 390
Query: 265 W 265
W
Sbjct: 391 W 391
>UNIPROTKB|E2QUL1 [details] [associations]
symbol:GRIN3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060134 "prepulse inhibition" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0043025 "neuronal cell
body" evidence=IEA] [GO:0043005 "neuron projection" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016358 "dendrite development" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0045471
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0016358 GO:GO:0035235 GO:GO:0043005 GO:GO:0060134
GO:GO:0030288 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 OMA:QSQGEMM GO:GO:0004972
EMBL:AAEX03008005 Ensembl:ENSCAFT00000004119 NextBio:20850739
Uniprot:E2QUL1
Length = 1112
Score = 168 (64.2 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 78/365 (21%), Positives = 150/365 (41%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGT----SSGSYNDLIYQVFLGEFDAVVGDTT 394
GY ID+ + + E++ + DF Y DG +G + L+ + G V +
Sbjct: 578 GYCIDLLEKLAEDMNF----DFDLYIVGDGKYGAWKNGHWTGLVGDLLSGSAHLAVTSFS 633
Query: 395 IVFNRSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVV 454
I RS +DFT P+ + + ++V +D+ F+ PL W +W+ G F +
Sbjct: 634 INTARSQVIDFTSPFFSTSLGILVRTRDTAAPIG-AFMWPLHWTMWL--GIFVALHITAI 690
Query: 455 WVLEHRVNEDFRGPARHQVGTSFWFSFST-------MVFSQRERVISN---LARFVVIVW 504
++ + F G S FSFS+ ++F + + RF++ +W
Sbjct: 691 FLTLYEWKSPF-GMTPKGRNRSKVFSFSSALNVCYALLFGRTAAIKPPKCWTGRFLMNLW 749
Query: 505 CFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIKRGDNVGYQKG----SFVLGILKQL 560
+ + +YTA+L +++ +++ ++ ++ + G++ G S ++Q
Sbjct: 750 AIFCMFCLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQ- 808
Query: 561 GFDERKLVV--YNSHEECDEL-FQKGSANGGIAAAFDE--IPYAKLLIGQHCSKYTMVEP 615
F E + YN D + + K A D+ + Y ++ I C T+ +P
Sbjct: 809 SFPEMHEYMRRYNVPATPDGVEYLKNDPEKLDAFIMDKALLDY-EVSIDADCKLLTVGKP 867
Query: 616 TFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKHSSCPDAGTVVSARSL 675
F G+G P +SPL ++S+ I M + D W+K + V +
Sbjct: 868 -FAIEGYGIGLPPNSPLTSNISELISQYKSHGFMDVLHDKWYKVVPCGKRSFAVTETLQM 926
Query: 676 GLNSF 680
G+ F
Sbjct: 927 GIKHF 931
Score = 61 (26.5 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 27/99 (27%), Positives = 44/99 (44%)
Query: 171 NIFGLLAYDATSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIR 230
+IF DA +A AV A + + N D+E ++ +G L + L++
Sbjct: 383 SIFEYYVQDAMELVARAVATATMIQPELALIPSTMNCMDVETANLT-SGQYLSRFLANTT 441
Query: 231 FRGLTGDYIFVDGQLQSSA---FEIINVNNGARGVGFWS 266
FRG++G I V G S+ F I N+ + G W+
Sbjct: 442 FRGISGS-IRVKGSTIISSENNFFIWNLQHDPMGKPMWT 479
Score = 38 (18.4 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 93 RIFEKANEIGLMNKGCVWIMTDGMT-NLLRT 122
RIFE + G+ W++ D LRT
Sbjct: 337 RIFEITTQFGVTPPELRWVLGDSQNVEELRT 367
>UNIPROTKB|F1MP46 [details] [associations]
symbol:GRIN2C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA] [GO:0042177 "negative regulation
of protein catabolic process" evidence=IEA] [GO:0033058
"directional locomotion" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005737 GO:GO:0014069 GO:GO:0008104 GO:GO:0009611
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0050885
GO:GO:0060079 GO:GO:0030288 GO:GO:0005261 GO:GO:0042177
InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234 GO:GO:0004972
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 OMA:CTWRRIS EMBL:DAAA02049538
IPI:IPI00999923 Ensembl:ENSBTAT00000015137 Uniprot:F1MP46
Length = 1242
Score = 180 (68.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 52/213 (24%), Positives = 104/213 (48%)
Query: 339 GYSIDVFKAVIEELPYAVAYDFVPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFN 398
G+ ID+ K + + ++ V + G +N +I +V+ D +G TI
Sbjct: 470 GFCIDILKKLARVVRFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 529
Query: 399 RSNYVDFTLPYTESGVSMIVPIKDSKKRNAWVFLQPLTWDLWVTSG--CFFIFIGFVVWV 456
RS VDF++P+ E+G+S++V + + + FL+P + +WV C + + V++
Sbjct: 530 RSEIVDFSVPFVETGISVMVA-RSNGTVSPSAFLEPYSPAVWVMMFVMCLTV-VAITVFM 587
Query: 457 LEH----RVNEDFR------GPARHQVGTSFWFSFSTMVFSQR---ERVISNLARFVVIV 503
E+ N++ GP+ +G S W ++ +VF+ E ++ +V+V
Sbjct: 588 FEYFSPVSYNQNLTSGKRSGGPS-FTIGKSVWLLWA-LVFNNSVPIENPRGTTSKIMVLV 645
Query: 504 WCFVVLILIQSYTASLTSLLTVDQLQPTITDVN 536
W F +I + SYTA+L + + +Q T++ ++
Sbjct: 646 WAFFAVIFLASYTANLAAFMIQEQYIDTVSGLS 678
Score = 42 (19.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 94 IFEKANEIGLMNKGCVWIM 112
+F +A + GL+ G VW++
Sbjct: 249 LFAEAAQAGLVGPGHVWLV 267
>UNIPROTKB|F5GZ52 [details] [associations]
symbol:GRIN2A "Glutamate receptor ionotropic, NMDA 2A"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC006531 EMBL:AC007218 EMBL:AC022168
EMBL:AC026423 EMBL:AC133565 HGNC:HGNC:4585 InterPro:IPR018884
Pfam:PF10565 IPI:IPI01012161 ProteinModelPortal:F5GZ52 SMR:F5GZ52
Ensembl:ENST00000535259 UCSC:uc010uyn.2 ArrayExpress:F5GZ52
Bgee:F5GZ52 Uniprot:F5GZ52
Length = 1124
Score = 178 (67.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 60/249 (24%), Positives = 114/249 (45%)
Query: 304 PTNEKKLRVGVPVKKGFSDFVKV---TIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDF 360
P E +R VP +K FVK+ T + + G+ ID+ K + + +
Sbjct: 267 PLTETCVRNTVPCRK----FVKINNSTNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYL 322
Query: 361 VPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPI 420
V + + +N +I +V VG TI RS VDF++P+ E+G+S++V
Sbjct: 323 VTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVS- 381
Query: 421 KDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFV-VWVLEH----RVNEDF-RGPARH--- 471
+ + + FL+P + +WV + + + V+V E+ N + +G A H
Sbjct: 382 RSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPS 441
Query: 472 -QVGTSFWFSFSTMVFSQRERVIS---NLARFVVIVWCFVVLILIQSYTASLTSLLTVDQ 527
+G + W + +VF+ V + ++ +V VW F +I + SYTA+L + + ++
Sbjct: 442 FTIGKAIWLLWG-LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE 500
Query: 528 LQPTITDVN 536
+T ++
Sbjct: 501 FVDQVTGLS 509
Score = 43 (20.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 55 RSVISPLATDDQIEKELYKLFTMQTRVFILHMLPSLGSRIFEKANEIGLMNKGCVWI--- 111
++VI+ L T + K +L + + V +L+ I +A +GL WI
Sbjct: 44 QNVIT-LDTSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWIVPS 102
Query: 112 MTDGMTNLLRTLEPS 126
+ G T L+ PS
Sbjct: 103 LVSGNTELIPKEFPS 117
WARNING: HSPs involving 45 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 829 795 0.00096 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 295
No. of states in DFA: 626 (67 KB)
Total size of DFA: 404 KB (2195 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 63.55u 0.12s 63.67t Elapsed: 00:00:03
Total cpu time: 63.69u 0.12s 63.81t Elapsed: 00:00:04
Start: Mon May 20 21:10:58 2013 End: Mon May 20 21:11:02 2013
WARNINGS ISSUED: 2