Query         043278
Match_columns 752
No_of_seqs    457 out of 3512
Neff          9.0 
Searched_HMMs 29240
Date          Mon Mar 25 05:07:58 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043278.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043278hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4asz_A BDNF/NT-3 growth factor 100.0 3.4E-53 1.1E-57  443.9  17.8  259  430-707    13-288 (299)
  2 4aoj_A High affinity nerve gro 100.0 9.1E-53 3.1E-57  446.7  20.6  260  430-708    41-319 (329)
  3 4gt4_A Tyrosine-protein kinase 100.0 1.2E-52   4E-57  441.7  18.4  257  431-706    27-304 (308)
  4 3omv_A RAF proto-oncogene seri 100.0 7.9E-52 2.7E-56  433.4  22.8  263  430-711    36-303 (307)
  5 4b9d_A Serine/threonine-protei 100.0 9.3E-50 3.2E-54  423.6  17.9  251  430-702    24-277 (350)
  6 4fih_A Serine/threonine-protei 100.0 1.1E-49 3.7E-54  422.4  18.4  250  430-702    74-324 (346)
  7 4ase_A Vascular endothelial gr 100.0 3.2E-50 1.1E-54  430.5  13.9  269  420-706    54-345 (353)
  8 3hmm_A TGF-beta receptor type- 100.0 4.8E-49 1.7E-53  415.0  19.6  267  430-706     3-295 (303)
  9 4g3f_A NF-kappa-beta-inducing  100.0 4.8E-49 1.7E-53  416.3  18.5  252  430-706    58-314 (336)
 10 4aw0_A HPDK1, 3-phosphoinositi 100.0 8.2E-49 2.8E-53  409.5  18.9  248  430-700    32-283 (311)
 11 4fie_A Serine/threonine-protei 100.0 4.8E-48 1.6E-52  419.8  24.0  250  430-702   151-401 (423)
 12 3fpq_A Serine/threonine-protei 100.0 8.9E-48   3E-52  399.8  23.7  247  433-702    29-283 (290)
 13 3hyh_A Carbon catabolite-derep 100.0 2.1E-47 7.3E-52  393.4  22.5  246  430-702    13-263 (275)
 14 3ubd_A Ribosomal protein S6 ki 100.0 1.1E-47 3.8E-52  401.1  14.5  248  430-702    24-282 (304)
 15 4g31_A Eukaryotic translation  100.0 3.3E-46 1.1E-50  391.4  20.3  256  430-706     5-286 (299)
 16 2qkw_B Protein kinase; three-h 100.0 8.8E-45   3E-49  387.4  23.6  282  422-706    31-313 (321)
 17 3uim_A Brassinosteroid insensi 100.0 6.4E-44 2.2E-48  381.5  24.0  293  414-707    14-310 (326)
 18 4b99_A Mitogen-activated prote 100.0   2E-43 6.9E-48  384.4  24.2  264  429-702    53-345 (398)
 19 4f9c_A Cell division cycle 7-r 100.0 5.4E-43 1.9E-47  377.1  24.6  201  427-638    18-251 (361)
 20 3uto_A Twitchin; kinase, muscl 100.0 4.9E-43 1.7E-47  400.0  18.6  252  430-702   157-411 (573)
 21 2nru_A Interleukin-1 receptor- 100.0 2.2E-41 7.5E-46  358.5  28.8  285  415-707    10-305 (307)
 22 3v5w_A G-protein coupled recep 100.0   2E-42 6.7E-47  392.0  19.9  249  430-702   189-450 (689)
 23 2psq_A Fibroblast growth facto 100.0 1.8E-41 6.2E-46  368.7  20.2  258  430-706    81-362 (370)
 24 3p86_A Serine/threonine-protei 100.0 3.1E-41 1.1E-45  357.7  21.2  262  428-708    35-298 (309)
 25 3soc_A Activin receptor type-2 100.0 8.5E-42 2.9E-46  364.4  14.7  268  429-706    23-316 (322)
 26 3s95_A LIMK-1, LIM domain kina 100.0 5.6E-41 1.9E-45  356.0  20.8  258  430-706    10-280 (310)
 27 3fxz_A Serine/threonine-protei 100.0 7.4E-41 2.5E-45  352.8  21.5  251  429-702    19-270 (297)
 28 2c30_A Serine/threonine-protei 100.0 4.2E-40 1.4E-44  351.0  27.3  262  418-702    23-295 (321)
 29 3kul_A Ephrin type-A receptor  100.0 3.5E-41 1.2E-45  360.0  16.1  259  429-708    48-313 (325)
 30 2qol_A Ephrin receptor; recept 100.0 5.3E-41 1.8E-45  365.4  17.0  257  429-706    44-307 (373)
 31 3cbl_A C-FES, proto-oncogene t 100.0 2.4E-41 8.1E-46  369.0  13.8  257  429-706   113-372 (377)
 32 3poz_A Epidermal growth factor 100.0 4.9E-41 1.7E-45  359.3  15.8  255  430-706    15-276 (327)
 33 3l9p_A Anaplastic lymphoma kin 100.0 7.1E-41 2.4E-45  363.7  15.4  258  430-706    71-343 (367)
 34 3fe3_A MAP/microtubule affinit 100.0   5E-40 1.7E-44  351.1  21.7  247  430-702    15-265 (328)
 35 4hcu_A Tyrosine-protein kinase 100.0 1.7E-40 5.7E-45  344.8  17.4  254  430-706    10-264 (269)
 36 3vhe_A Vascular endothelial gr 100.0 3.7E-41 1.3E-45  365.0  12.9  269  420-706    12-353 (359)
 37 1luf_A Muscle-specific tyrosin 100.0 5.4E-40 1.9E-44  353.5  21.4  263  427-708    44-335 (343)
 38 4euu_A Serine/threonine-protei 100.0 2.1E-39 7.3E-44  345.3  25.7  271  430-708     9-309 (319)
 39 3tt0_A Basic fibroblast growth 100.0 1.2E-40 4.2E-45  364.0  16.5  261  429-708    68-352 (382)
 40 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.9E-40   1E-44  342.7  18.1  257  429-708     7-264 (268)
 41 2ivs_A Proto-oncogene tyrosine 100.0 2.5E-40 8.5E-45  351.4  17.8  259  429-706    22-309 (314)
 42 3zgw_A Maternal embryonic leuc 100.0 5.8E-40   2E-44  352.7  20.5  250  429-702     9-261 (347)
 43 3tki_A Serine/threonine-protei 100.0 4.4E-40 1.5E-44  351.1  19.5  253  430-702     7-262 (323)
 44 3q4u_A Activin receptor type-1 100.0 1.2E-39 4.1E-44  344.0  22.3  261  429-706     7-300 (301)
 45 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.3E-40   8E-45  369.7  17.4  263  430-715   184-447 (452)
 46 3ugc_A Tyrosine-protein kinase 100.0 1.6E-41 5.3E-46  357.6   7.2  264  429-706     9-289 (295)
 47 1qcf_A Haematopoetic cell kina 100.0 1.9E-40 6.5E-45  370.8  16.3  257  429-708   187-444 (454)
 48 3lb7_A RAF proto-oncogene seri 100.0 1.7E-39 5.7E-44  344.2  22.7  264  429-711    35-303 (307)
 49 1opk_A P150, C-ABL, proto-onco 100.0 4.8E-40 1.6E-44  371.1  19.7  256  430-707   220-477 (495)
 50 3qup_A Tyrosine-protein kinase 100.0 2.3E-40 7.9E-45  353.4  15.3  261  428-707    21-297 (323)
 51 2izr_A Casein kinase I isoform 100.0 2.9E-39   1E-43  346.0  23.7  260  429-706     8-279 (330)
 52 3niz_A Rhodanese family protei 100.0 1.1E-39 3.7E-44  346.2  20.2  263  429-702    20-301 (311)
 53 3kex_A Receptor tyrosine-prote 100.0 2.2E-40 7.4E-45  354.0  14.7  256  430-707    13-275 (325)
 54 1rjb_A FL cytokine receptor; k 100.0 3.6E-40 1.2E-44  355.1  16.5  263  428-708    43-334 (344)
 55 3dtc_A Mitogen-activated prote 100.0 6.8E-40 2.3E-44  340.5  17.9  253  430-706     7-271 (271)
 56 3gen_A Tyrosine-protein kinase 100.0 5.1E-40 1.7E-44  343.8  16.5  255  429-706    23-278 (283)
 57 2eva_A TAK1 kinase - TAB1 chim 100.0 4.8E-39 1.7E-43  340.6  23.3  262  430-715     8-270 (307)
 58 4eqm_A Protein kinase; transfe 100.0 1.3E-39 4.4E-44  342.8  18.7  261  429-708    10-275 (294)
 59 1o6l_A RAC-beta serine/threoni 100.0   4E-39 1.4E-43  345.1  22.6  248  430-702     5-261 (337)
 60 1k9a_A Carboxyl-terminal SRC k 100.0   2E-39 6.9E-44  361.9  21.0  249  430-706   193-443 (450)
 61 1t46_A HOMO sapiens V-KIT hard 100.0 6.6E-40 2.3E-44  348.0  16.3  260  429-706    22-305 (313)
 62 1p4o_A Insulin-like growth fac 100.0 9.9E-40 3.4E-44  348.3  16.3  264  426-708    21-299 (322)
 63 3qd2_B Eukaryotic translation  100.0 5.6E-39 1.9E-43  343.6  22.2  253  429-702     5-326 (332)
 64 2yab_A Death-associated protei 100.0 2.3E-39 7.9E-44  350.2  19.1  252  429-702    11-273 (361)
 65 2pvf_A Fibroblast growth facto 100.0 5.4E-39 1.9E-43  344.5  21.9  259  429-706    34-316 (334)
 66 3lxl_A Tyrosine-protein kinase 100.0 1.1E-39 3.9E-44  348.7  16.5  265  430-708    23-303 (327)
 67 1csn_A Casein kinase-1; phosph 100.0 9.3E-39 3.2E-43  336.6  23.1  261  429-706     9-281 (298)
 68 2i1m_A Macrophage colony-stimu 100.0 8.8E-40   3E-44  350.4  15.0  261  428-706    44-324 (333)
 69 2y0a_A Death-associated protei 100.0 2.7E-39 9.2E-44  345.6  18.5  252  429-702    10-272 (326)
 70 4aw2_A Serine/threonine-protei 100.0 2.3E-39 7.8E-44  358.2  17.9  264  421-702    65-339 (437)
 71 4fvq_A Tyrosine-protein kinase 100.0 5.3E-39 1.8E-43  337.0  19.8  251  430-708     8-275 (289)
 72 2zv2_A Calcium/calmodulin-depe 100.0 1.3E-38 4.4E-43  335.8  22.8  249  430-702    13-293 (298)
 73 3lzb_A Epidermal growth factor 100.0 3.1E-39 1.1E-43  345.2  18.0  256  430-707    15-277 (327)
 74 4dc2_A Protein kinase C IOTA t 100.0 7.4E-39 2.5E-43  349.5  21.2  255  430-702    52-319 (396)
 75 3t9t_A Tyrosine-protein kinase 100.0 2.3E-39 7.9E-44  335.5  16.2  254  430-706     8-262 (267)
 76 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-39 3.8E-44  371.6  15.0  261  429-712   266-527 (535)
 77 1tki_A Titin; serine kinase, m 100.0 2.4E-39 8.3E-44  345.0  16.8  252  429-702     4-258 (321)
 78 3dbq_A Dual specificity protei 100.0   2E-39 6.9E-44  349.2  16.2  252  429-702     8-274 (343)
 79 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.6E-39 1.2E-43  347.7  18.2  249  429-702    22-281 (353)
 80 1mp8_A Focal adhesion kinase 1 100.0   3E-39   1E-43  337.6  16.9  255  429-706    14-274 (281)
 81 4fr4_A YANK1, serine/threonine 100.0   1E-38 3.5E-43  347.2  21.2  249  430-701    15-271 (384)
 82 1kob_A Twitchin; kinase, intra 100.0 5.2E-39 1.8E-43  350.6  19.0  253  429-702    50-305 (387)
 83 3og7_A AKAP9-BRAF fusion prote 100.0   1E-38 3.4E-43  335.2  20.4  260  429-707    23-287 (289)
 84 2xir_A Vascular endothelial gr 100.0 1.6E-39 5.4E-44  345.6  14.4  269  420-706    17-308 (316)
 85 4e5w_A Tyrosine-protein kinase 100.0 7.8E-39 2.7E-43  338.0  19.5  263  430-706    21-300 (302)
 86 3o0g_A Cell division protein k 100.0   7E-39 2.4E-43  336.8  19.0  263  430-702     2-283 (292)
 87 4f0f_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43  333.8  20.8  254  430-706    19-287 (287)
 88 1ob3_A PFPK5, cell division co 100.0 3.6E-39 1.2E-43  338.4  16.6  262  430-702     2-281 (288)
 89 1fot_A TPK1 delta, CAMP-depend 100.0 2.6E-38 8.8E-43  336.3  23.2  245  430-702     6-259 (318)
 90 3gni_B Strad alpha; kinase fol 100.0 1.4E-38 4.7E-43  348.9  21.7  263  429-702    24-334 (389)
 91 3uc3_A Serine/threonine-protei 100.0 1.3E-38 4.6E-43  344.9  21.3  253  429-702    19-275 (361)
 92 3brb_A Proto-oncogene tyrosine 100.0 3.2E-39 1.1E-43  342.9  16.1  261  428-707    32-307 (313)
 93 3soa_A Calcium/calmodulin-depe 100.0 7.7E-39 2.6E-43  355.2  19.8  254  428-702     9-268 (444)
 94 3op5_A Serine/threonine-protei 100.0 7.6E-39 2.6E-43  347.6  19.3  266  429-706    34-327 (364)
 95 2buj_A Serine/threonine-protei 100.0 8.6E-39   3E-43  340.2  19.3  266  429-711    28-309 (317)
 96 1qpc_A LCK kinase; alpha beta  100.0 3.4E-39 1.2E-43  336.8  15.8  255  429-706    12-267 (279)
 97 3v8s_A RHO-associated protein  100.0 1.6E-39 5.6E-44  356.6  14.1  259  423-702    62-330 (410)
 98 3kfa_A Tyrosine-protein kinase 100.0 5.2E-39 1.8E-43  336.9  17.1  256  429-706    12-269 (288)
 99 2bdw_A Hypothetical protein K1 100.0 6.5E-39 2.2E-43  347.4  18.3  253  428-702    27-285 (362)
100 2v62_A Serine/threonine-protei 100.0 1.8E-38 6.2E-43  342.0  21.4  267  429-708    36-328 (345)
101 2zmd_A Dual specificity protei 100.0 4.5E-39 1.5E-43  352.3  16.9  252  429-702    55-321 (390)
102 3a8x_A Protein kinase C IOTA t 100.0 2.4E-38 8.1E-43  340.5  22.0  255  430-702     9-276 (345)
103 3c0i_A Peripheral plasma membr 100.0 1.4E-38 4.7E-43  343.6  20.3  255  429-702    23-287 (351)
104 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.3E-39 1.8E-43  343.8  16.8  246  430-702     9-259 (336)
105 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.8E-38 9.6E-43  340.5  22.6  245  430-702    41-294 (350)
106 3p1a_A MYT1 kinase, membrane-a 100.0 4.8E-39 1.6E-43  341.3  16.3  246  429-702    56-305 (311)
107 3gxj_A TGF-beta receptor type- 100.0 6.8E-40 2.3E-44  346.1   9.7  263  429-708     2-297 (303)
108 3ork_A Serine/threonine protei 100.0 5.3E-39 1.8E-43  341.0  16.6  258  429-705    11-278 (311)
109 1xjd_A Protein kinase C, theta 100.0 9.2E-39 3.1E-43  343.3  18.6  250  427-701    14-269 (345)
110 2pmi_A Negative RE, cyclin-dep 100.0 1.1E-38 3.6E-43  339.6  18.7  265  429-702     4-294 (317)
111 2vd5_A DMPK protein; serine/th 100.0 3.4E-39 1.2E-43  354.3  15.1  263  421-702    52-328 (412)
112 1mqb_A Ephrin type-A receptor  100.0   1E-38 3.4E-43  342.3  18.4  257  430-707    44-308 (333)
113 3lxp_A Non-receptor tyrosine-p 100.0 6.1E-40 2.1E-44  349.4   8.6  259  432-706    33-308 (318)
114 1u59_A Tyrosine-protein kinase 100.0 1.1E-38 3.7E-43  334.5  17.7  255  430-706     9-270 (287)
115 3mdy_A Bone morphogenetic prot 100.0 6.9E-38 2.4E-42  336.0  24.3  269  425-707    32-330 (337)
116 4eut_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42  346.6  22.1  269  430-706     9-307 (396)
117 4hgt_A Casein kinase I isoform 100.0   7E-38 2.4E-42  329.5  23.6  262  428-706     7-278 (296)
118 3kn6_A Ribosomal protein S6 ki 100.0 1.6E-38 5.6E-43  339.3  19.0  251  435-702    16-271 (325)
119 2w4o_A Calcium/calmodulin-depe 100.0 3.6E-38 1.2E-42  340.0  21.8  251  429-702    52-306 (349)
120 3a62_A Ribosomal protein S6 ki 100.0 3.1E-38 1.1E-42  337.5  20.9  249  429-702    16-277 (327)
121 2x4f_A Myosin light chain kina 100.0   1E-38 3.5E-43  347.2  17.0  247  435-702    94-343 (373)
122 2yfx_A Tyrosine-protein kinase 100.0 8.9E-39 3.1E-43  341.8  16.2  259  429-706    29-302 (327)
123 3uzp_A CKI-delta, CKID, casein 100.0 1.1E-37 3.8E-42  328.1  24.2  261  429-706     8-278 (296)
124 2ozo_A Tyrosine-protein kinase 100.0 1.4E-38 4.6E-43  367.8  18.8  248  437-706   343-596 (613)
125 3ll6_A Cyclin G-associated kin 100.0 4.9E-39 1.7E-43  344.8  14.0  258  429-707    27-307 (337)
126 3llt_A Serine/threonine kinase 100.0 1.6E-38 5.6E-43  344.4  18.2  212  416-638    21-263 (360)
127 3cc6_A Protein tyrosine kinase 100.0 1.4E-38 4.8E-43  332.5  17.0  255  429-706    11-271 (281)
128 1b6c_B TGF-B superfamily recep 100.0 9.3E-38 3.2E-42  335.9  23.9  265  425-706    37-334 (342)
129 3c1x_A Hepatocyte growth facto 100.0   1E-38 3.6E-43  347.0  16.5  256  431-707    90-354 (373)
130 2wqm_A Serine/threonine-protei 100.0 3.7E-38 1.3E-42  334.3  20.3  261  430-708    32-297 (310)
131 2yex_A Serine/threonine-protei 100.0 3.1E-38   1E-42  328.8  19.3  254  429-702     6-262 (276)
132 2i0e_A Protein kinase C-beta I 100.0 3.9E-38 1.3E-42  339.5  20.7  249  429-702    19-277 (353)
133 3hko_A Calcium/calmodulin-depe 100.0 4.2E-38 1.4E-42  339.0  21.0  262  425-702    21-331 (345)
134 2a19_B Interferon-induced, dou 100.0 6.5E-38 2.2E-42  327.6  21.5  251  428-710     9-276 (284)
135 3g33_A Cell division protein k 100.0 2.6E-38 8.9E-43  335.1  18.7  264  428-702     7-297 (308)
136 3kmu_A ILK, integrin-linked ki 100.0 8.9E-39   3E-43  331.7  14.8  253  430-707    10-269 (271)
137 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.5E-38 1.2E-42  342.6  20.0  252  428-706    63-337 (365)
138 3f3z_A Calcium/calmodulin-depe 100.0 1.4E-37 4.8E-42  324.2  23.7  252  428-702     7-262 (277)
139 4agu_A Cyclin-dependent kinase 100.0 1.4E-38 4.8E-43  337.6  16.4  263  430-702     3-285 (311)
140 2ac3_A MAP kinase-interacting  100.0 1.6E-38 5.5E-43  337.9  16.9  261  430-702    12-296 (316)
141 3g2f_A Bone morphogenetic prot 100.0 2.3E-38   8E-43  339.7  18.2  264  430-706    13-316 (336)
142 3f66_A Hepatocyte growth facto 100.0   3E-38   1E-42  332.9  18.7  257  429-706    24-289 (298)
143 2eue_A Carbon catabolite derep 100.0 7.4E-38 2.5E-42  325.9  21.3  246  430-702    13-263 (275)
144 2y94_A 5'-AMP-activated protei 100.0 7.9E-38 2.7E-42  349.4  22.7  247  430-702    16-267 (476)
145 1xbb_A Tyrosine-protein kinase 100.0   1E-38 3.6E-43  335.3  14.6  255  429-706    15-277 (291)
146 3pls_A Macrophage-stimulating  100.0 3.6E-38 1.2E-42  332.1  18.6  256  431-706    22-285 (298)
147 3cok_A Serine/threonine-protei 100.0 3.9E-38 1.3E-42  328.5  18.6  250  429-702    10-263 (278)
148 1u5q_A Serine/threonine protei 100.0 5.7E-38   2E-42  338.1  20.4  248  429-703    53-307 (348)
149 3kk8_A Calcium/calmodulin depe 100.0 6.1E-38 2.1E-42  328.0  19.7  252  429-702     5-262 (284)
150 3is5_A Calcium-dependent prote 100.0 1.5E-37 5.3E-42  325.4  22.6  253  429-702    21-279 (285)
151 4ejn_A RAC-alpha serine/threon 100.0 2.5E-38 8.4E-43  353.1  17.5  249  429-702   147-405 (446)
152 3fdn_A Serine/threonine-protei 100.0 8.3E-38 2.8E-42  326.3  20.4  247  429-702     8-258 (279)
153 2h34_A Serine/threonine-protei 100.0 2.6E-37 8.8E-42  327.7  24.4  258  429-708    33-296 (309)
154 2w1i_A JAK2; chromosomal rearr 100.0 6.9E-38 2.4E-42  334.7  19.9  264  429-706    40-320 (326)
155 2a2a_A Death-associated protei 100.0 4.7E-38 1.6E-42  335.3  18.4  252  429-702    11-273 (321)
156 2acx_A G protein-coupled recep 100.0 6.4E-38 2.2E-42  354.8  20.6  254  429-702   183-445 (576)
157 3sv0_A Casein kinase I-like; t 100.0 2.1E-37 7.3E-42  346.5  24.5  261  429-706     6-276 (483)
158 1fvr_A Tyrosine-protein kinase 100.0 3.4E-38 1.2E-42  337.3  17.3  255  430-706    25-298 (327)
159 3oz6_A Mitogen-activated prote 100.0 1.1E-37 3.8E-42  341.5  21.7  264  428-702     7-329 (388)
160 1vzo_A Ribosomal protein S6 ki 100.0 4.2E-38 1.4E-42  340.4  18.1  254  430-703    54-323 (355)
161 4fl3_A Tyrosine-protein kinase 100.0 2.2E-38 7.5E-43  367.0  16.9  248  436-706   375-629 (635)
162 2qr7_A Ribosomal protein S6 ki 100.0 7.3E-38 2.5E-42  336.3  19.2  253  428-702    20-278 (342)
163 2clq_A Mitogen-activated prote 100.0 1.6E-37 5.6E-42  326.6  21.5  253  431-702    23-279 (295)
164 3dls_A PAS domain-containing s 100.0 5.8E-38   2E-42  336.4  18.3  243  428-702    22-275 (335)
165 2wtk_C Serine/threonine-protei 100.0 5.6E-37 1.9E-41  324.3  25.5  252  429-702     4-264 (305)
166 2rku_A Serine/threonine-protei 100.0 3.1E-37 1.1E-41  324.5  23.3  249  429-702    14-266 (294)
167 1byg_A CSK, protein (C-termina 100.0 3.1E-38 1.1E-42  329.3  15.5  250  429-706    20-271 (278)
168 2w5a_A Serine/threonine-protei 100.0 4.4E-38 1.5E-42  328.2  16.4  259  429-705     5-271 (279)
169 2owb_A Serine/threonine-protei 100.0 2.6E-37 8.9E-42  331.5  22.8  249  429-702    40-292 (335)
170 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.1E-37 7.1E-42  349.9  22.9  255  429-701   184-448 (543)
171 2jam_A Calcium/calmodulin-depe 100.0   2E-37 6.8E-42  327.7  21.4  252  428-702     7-262 (304)
172 1nxk_A MAP kinase-activated pr 100.0 2.5E-37 8.6E-42  339.5  22.9  252  430-702    61-322 (400)
173 3a7i_A MST3 kinase, serine/thr 100.0   1E-37 3.6E-42  329.7  19.0  250  429-703    21-272 (303)
174 3mtl_A Cell division protein k 100.0 1.8E-38   6E-43  339.0  13.1  262  430-702     2-282 (324)
175 3ttj_A Mitogen-activated prote 100.0 6.3E-38 2.1E-42  350.5  18.1  259  429-702    61-356 (464)
176 3bhy_A Death-associated protei 100.0 7.5E-38 2.6E-42  327.2  17.4  252  429-702     4-266 (283)
177 2jii_A Serine/threonine-protei 100.0 6.4E-38 2.2E-42  338.7  17.3  262  429-706    41-334 (352)
178 2r5t_A Serine/threonine-protei 100.0 8.1E-38 2.8E-42  339.4  17.8  244  430-698    38-286 (373)
179 3byv_A Rhoptry kinase; malaria 100.0 7.7E-39 2.6E-43  349.3   9.7  243  429-702    72-360 (377)
180 4aaa_A Cyclin-dependent kinase 100.0 1.4E-37 4.9E-42  333.0  19.3  265  430-702    25-307 (331)
181 3mi9_A Cell division protein k 100.0 1.2E-37   4E-42  336.5  18.6  264  430-702    17-312 (351)
182 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.3E-37 4.3E-42  331.4  18.6  266  429-717    32-311 (319)
183 2j7t_A Serine/threonine-protei 100.0 2.5E-37 8.6E-42  326.4  20.7  253  429-702    18-276 (302)
184 1x8b_A WEE1HU, WEE1-like prote 100.0 1.3E-37 4.4E-42  325.9  18.3  246  429-702    10-280 (289)
185 1ua2_A CAK, cell division prot 100.0 1.3E-37 4.4E-42  335.5  18.5  266  427-703     7-293 (346)
186 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.4E-38 1.5E-42  336.6  14.7  262  428-702    32-319 (329)
187 2vgo_A Serine/threonine-protei 100.0 5.8E-37   2E-41  320.8  22.8  246  430-702    14-263 (284)
188 3i6u_A CDS1, serine/threonine- 100.0 1.3E-37 4.3E-42  344.1  18.6  253  428-702   133-400 (419)
189 1u46_A ACK-1, activated CDC42  100.0 4.7E-38 1.6E-42  330.1  14.3  258  429-707    17-283 (291)
190 2vwi_A Serine/threonine-protei 100.0 6.1E-38 2.1E-42  331.1  15.1  262  428-702    13-288 (303)
191 3eqc_A Dual specificity mitoge 100.0 2.9E-37 9.8E-42  334.7  20.8  200  429-638    32-234 (360)
192 3rp9_A Mitogen-activated prote 100.0 3.4E-37 1.2E-41  345.2  21.0  195  429-630    52-280 (458)
193 3q60_A ROP5B; pseudokinase, tr 100.0 7.9E-38 2.7E-42  340.5  15.0  254  430-702    62-353 (371)
194 2r3i_A Cell division protein k 100.0 1.6E-36 5.4E-41  319.8  24.3  268  430-707     3-291 (299)
195 3lm5_A Serine/threonine-protei 100.0 2.1E-37 7.2E-42  331.1  17.7  258  425-702    23-288 (327)
196 2y7j_A Phosphorylase B kinase  100.0 2.3E-36 7.8E-41  328.0  25.8  258  423-702    87-360 (365)
197 3pg1_A Mitogen-activated prote 100.0 1.5E-37 5.2E-42  337.1  16.5  270  421-702    13-317 (362)
198 3com_A Serine/threonine-protei 100.0 1.7E-36 5.8E-41  322.0  24.2  252  428-702    27-279 (314)
199 2h6d_A 5'-AMP-activated protei 100.0 5.6E-37 1.9E-41  319.3  20.0  247  430-702    11-262 (276)
200 4e7w_A Glycogen synthase kinas 100.0 1.6E-37 5.4E-42  340.6  16.3  260  430-702    40-322 (394)
201 1cm8_A Phosphorylated MAP kina 100.0 1.2E-37 3.9E-42  338.4  14.9  261  429-706    24-314 (367)
202 1t4h_A Serine/threonine-protei 100.0 1.9E-36 6.4E-41  317.9  23.4  250  430-702    26-283 (290)
203 3pfq_A PKC-B, PKC-beta, protei 100.0   8E-37 2.7E-41  356.3  22.5  250  428-702   339-598 (674)
204 1wak_A Serine/threonine-protei 100.0 1.7E-36 5.7E-41  332.9  23.4  263  429-702    36-392 (397)
205 2x7f_A TRAF2 and NCK-interacti 100.0   4E-37 1.4E-41  328.7  17.9  261  420-702    14-287 (326)
206 3mwu_A Calmodulin-domain prote 100.0   1E-36 3.6E-41  343.8  22.3  252  428-702    20-277 (486)
207 3lij_A Calcium/calmodulin depe 100.0 4.5E-37 1.5E-41  347.4  19.3  251  429-702    36-292 (494)
208 3fme_A Dual specificity mitoge 100.0   1E-37 3.4E-42  327.4  12.9  253  429-702     6-267 (290)
209 3nsz_A CK II alpha, casein kin 100.0 7.5E-37 2.6E-41  327.1  19.7  257  429-702    35-320 (330)
210 3m7h_A Putidacin L1; monocot m 100.0 6.9E-38 2.4E-42  321.3  10.8  201    2-248    28-240 (276)
211 3n9x_A Phosphotransferase; mal 100.0 1.3E-36 4.5E-41  337.5  21.9  200  429-635    25-253 (432)
212 3nyv_A Calmodulin-domain prote 100.0 5.7E-37   2E-41  345.9  19.3  251  429-702    25-282 (484)
213 3kvw_A DYRK2, dual specificity 100.0 1.3E-36 4.4E-41  337.0  21.8  199  429-638    96-303 (429)
214 3cek_A Dual specificity protei 100.0 2.7E-37 9.3E-42  328.1  15.6  253  428-702    26-293 (313)
215 2pml_X PFPK7, Ser/Thr protein  100.0 8.4E-37 2.9E-41  329.3  19.4  258  430-702    31-323 (348)
216 3qyz_A Mitogen-activated prote 100.0 1.9E-36 6.4E-41  328.8  22.2  263  429-702    26-314 (364)
217 3q5i_A Protein kinase; CDPK, m 100.0 3.9E-36 1.3E-40  340.6  24.9  252  428-702    34-302 (504)
218 1j1b_A Glycogen synthase kinas 100.0 7.8E-37 2.7E-41  337.9  18.5  259  430-702    54-337 (420)
219 1phk_A Phosphorylase kinase; g 100.0 1.1E-36 3.9E-41  320.7  18.9  251  429-701    16-283 (298)
220 3eb0_A Putative uncharacterize 100.0 2.6E-37 8.8E-42  337.9  14.0  263  426-702     3-322 (383)
221 2i6l_A Mitogen-activated prote 100.0 1.5E-36 5.1E-41  323.0  19.3  267  429-706    10-312 (320)
222 2ycf_A Serine/threonine-protei 100.0 1.1E-36 3.7E-41  324.9  18.2  253  428-702     8-275 (322)
223 2fst_X Mitogen-activated prote 100.0   1E-36 3.5E-41  330.7  17.7  257  429-702    28-312 (367)
224 2xrw_A Mitogen-activated prote 100.0   2E-36 6.7E-41  329.4  19.9  261  430-702    25-319 (371)
225 3e3p_A Protein kinase, putativ 100.0 1.3E-36 4.5E-41  329.4  18.3  269  424-702    17-315 (360)
226 3an0_A Dual specificity mitoge 100.0 1.2E-36 4.2E-41  327.0  17.8  254  428-702    49-311 (340)
227 3rgf_A Cyclin-dependent kinase 100.0 3.1E-36 1.1E-40  331.9  21.2  267  430-702    20-334 (405)
228 2j0j_A Focal adhesion kinase 1 100.0 2.1E-36 7.2E-41  351.7  20.6  256  428-706   388-649 (656)
229 1z57_A Dual specificity protei 100.0 1.4E-36 4.8E-41  325.8  17.2  260  429-702    13-329 (339)
230 1blx_A Cyclin-dependent kinase 100.0 1.1E-36 3.8E-41  325.2  15.9  264  428-702     9-297 (326)
231 2b9h_A MAP kinase FUS3, mitoge 100.0 7.5E-37 2.6E-41  330.4  14.3  263  429-702    10-306 (353)
232 2vx3_A Dual specificity tyrosi 100.0   1E-35 3.5E-40  325.1  22.9  201  429-638    53-262 (382)
233 1q8y_A SR protein kinase; tran 100.0 2.2E-35 7.6E-40  321.3  25.3  262  430-702    19-334 (373)
234 3aln_A Dual specificity mitoge 100.0 2.7E-36 9.2E-41  322.5  17.7  255  430-702    22-286 (327)
235 4exu_A Mitogen-activated prote 100.0 5.3E-36 1.8E-40  326.0  20.2  256  429-702    41-324 (371)
236 1zy4_A Serine/threonine-protei 100.0 6.4E-36 2.2E-40  315.3  20.2  253  429-702     5-284 (303)
237 2wei_A Calmodulin-domain prote 100.0 8.4E-36 2.9E-40  312.5  20.9  253  427-702    19-277 (287)
238 2rio_A Serine/threonine-protei 100.0 3.9E-36 1.3E-40  333.7  19.3  253  431-702    16-296 (434)
239 3fhr_A MAP kinase-activated pr 100.0 6.3E-36 2.2E-40  320.8  17.8  253  429-702    27-288 (336)
240 3coi_A Mitogen-activated prote 100.0 3.8E-36 1.3E-40  325.0  15.1  255  430-702    24-306 (353)
241 2iwi_A Serine/threonine-protei 100.0 1.1E-35 3.8E-40  315.5  17.3  244  426-702    27-284 (312)
242 3p23_A Serine/threonine-protei 100.0 1.8E-35 6.2E-40  327.5  19.7  251  429-702    23-284 (432)
243 2eu9_A Dual specificity protei 100.0 3.6E-35 1.2E-39  317.1  20.8  259  430-702    19-334 (355)
244 2dyl_A Dual specificity mitoge 100.0 5.1E-35 1.7E-39  311.0  21.3  251  430-702    25-284 (318)
245 3a99_A Proto-oncogene serine/t 100.0 1.4E-35 4.7E-40  316.0  14.9  242  428-702    41-294 (320)
246 3qa8_A MGC80376 protein; kinas 100.0   2E-35 6.7E-40  337.6  16.3  264  429-698    13-294 (676)
247 3uqc_A Probable conserved tran 100.0 3.2E-34 1.1E-38  300.1  19.9  230  429-706    30-263 (286)
248 2pzi_A Probable serine/threoni 100.0 1.1E-34 3.8E-39  340.3  16.3  237  430-705    80-325 (681)
249 3dzo_A Rhoptry kinase domain;  100.0 9.9E-35 3.4E-39  320.3  10.4  241  430-701    78-363 (413)
250 3m2w_A MAP kinase-activated pr 100.0 2.3E-33 7.8E-38  295.9  19.6  227  430-702    17-257 (299)
251 2vuw_A Serine/threonine-protei 100.0 5.5E-34 1.9E-38  305.8  10.3  243  429-701    19-331 (336)
252 1dlp_A Lectin scafet precursor 100.0 7.9E-31 2.7E-35  264.9  13.8  194    6-248    24-227 (236)
253 4azs_A Methyltransferase WBDD;  99.9 7.6E-28 2.6E-32  274.6   8.5  183  437-631   241-435 (569)
254 3en9_A Glycoprotease, O-sialog  99.9 2.7E-25 9.3E-30  252.1   9.9  184  434-634   340-538 (540)
255 1zar_A RIO2 kinase; serine kin  99.9 2.3E-22 7.9E-27  209.1   9.4  154  422-608    82-253 (282)
256 1zth_A RIO1 serine protein kin  99.7 2.6E-18 8.8E-23  176.3  10.0  136  432-582    49-219 (258)
257 4h3o_A Lectin; cadmium, plant   99.7 5.9E-16   2E-20  134.0  11.5   90    3-130    16-105 (105)
258 1b2p_A Protein (lectin); manno  99.6 9.6E-16 3.3E-20  136.0  10.7   92    2-130    22-115 (119)
259 1xd5_A Gastrodianin-1, antifun  99.6   1E-15 3.5E-20  134.8  10.6   99   61-200    13-111 (112)
260 4gyi_A RIO2 kinase; protein ki  99.6 1.8E-16   6E-21  169.1   6.2  139  429-581    94-264 (397)
261 3a0c_A Mannose/sialic acid-bin  99.6 1.5E-15 5.2E-20  133.0  11.0   96    2-135    15-110 (110)
262 2dpf_A Curculin; sweet taste,   99.6 9.1E-15 3.1E-19  129.3  10.5   93    7-136    19-111 (115)
263 3a0c_A Mannose/sialic acid-bin  99.6 6.4E-15 2.2E-19  129.0   8.9  101   53-198     8-108 (110)
264 1xd5_A Gastrodianin-1, antifun  99.5 1.9E-14 6.5E-19  126.6   8.9   94    6-134    17-110 (112)
265 1b2p_A Protein (lectin); manno  99.5 6.5E-14 2.2E-18  124.2  10.5   86   69-197    32-117 (119)
266 2dpf_A Curculin; sweet taste,   99.5 1.8E-13 6.3E-18  120.9  10.4   92   68-202    21-112 (115)
267 3dzw_A Agglutinin; lectin, man  99.4 5.4E-13 1.8E-17  116.6   9.3   87    7-130    18-104 (109)
268 3tm0_A Aminoglycoside 3'-phosp  99.2 1.7E-11 5.8E-16  125.6  10.9  146  427-581    11-213 (263)
269 3r0e_B Lectin; carbohydrate bi  99.2 6.3E-11 2.1E-15  103.4  10.6   67   53-130    42-108 (110)
270 3mez_B Mannose-specific lectin  99.2 8.4E-11 2.9E-15  103.2  10.4   68   52-130    44-111 (113)
271 3mez_B Mannose-specific lectin  99.1 2.1E-10 7.3E-15  100.6   9.4   96   60-197    17-113 (113)
272 3mez_A Mannose-specific lectin  99.1 3.2E-10 1.1E-14   99.0   9.2   96   61-197    14-109 (111)
273 1nd4_A Aminoglycoside 3'-phosp  99.1 1.6E-10 5.4E-15  118.0   8.2  129  439-581    29-214 (264)
274 3r0e_A Lectin; carbohydrate bi  99.0 6.8E-10 2.3E-14   96.6   9.1   71   55-141    39-109 (109)
275 3dxp_A Putative acyl-COA dehyd  98.9 3.7E-09 1.3E-13  113.5  12.1  142  434-581    42-248 (359)
276 3r0e_B Lectin; carbohydrate bi  98.9 5.4E-09 1.8E-13   91.1   9.5   91   62-196    19-109 (110)
277 3sg8_A APH(2'')-ID; antibiotic  98.8 3.8E-09 1.3E-13  110.6   8.1  186  435-633    25-286 (304)
278 3dzw_A Agglutinin; lectin, man  98.8 8.3E-09 2.8E-13   89.8   8.6   86   68-196    20-105 (109)
279 3r0e_A Lectin; carbohydrate bi  98.8 1.1E-08 3.8E-13   88.9   9.2   95   59-199    13-107 (109)
280 3m7h_A Putidacin L1; monocot m  98.8 1.6E-08 5.3E-13  103.4  10.2   69   53-133   184-252 (276)
281 3mez_A Mannose-specific lectin  98.8   2E-08 6.7E-13   87.6   9.2   65   55-130    40-107 (111)
282 3r70_A Aminoglycoside phosphot  98.5 5.8E-07   2E-11   94.6  14.1  137  431-582    38-238 (320)
283 3d1u_A Putative fructosamine-3  98.4 1.1E-06 3.7E-11   90.8  12.3  141  434-580    19-215 (288)
284 3tdw_A Gentamicin resistance p  98.4 3.7E-06 1.3E-10   87.7  14.4  135  436-581    25-224 (306)
285 4h3o_A Lectin; cadmium, plant   98.4 2.1E-06 7.1E-11   73.8  10.2   55   69-130    21-76  (105)
286 1dlp_A Lectin scafet precursor  98.3 1.1E-06 3.7E-11   87.9   8.6   93   60-196   144-236 (236)
287 4gkh_A Aminoglycoside 3'-phosp  98.3 3.5E-06 1.2E-10   86.2  12.0  136  436-581    30-223 (272)
288 3ats_A Putative uncharacterize  98.2 2.5E-06 8.7E-11   91.1   8.5   79  436-514    26-121 (357)
289 3ovc_A Hygromycin-B 4-O-kinase  98.1 8.8E-06   3E-10   87.0  10.9  143  433-581    44-243 (362)
290 2q83_A YTAA protein; 2635576,   97.9 5.9E-05   2E-09   79.7  12.6  141  436-581    38-252 (346)
291 3f7w_A Putative fructosamine-3  97.9   5E-05 1.7E-09   78.3  11.4   80  430-513    15-97  (288)
292 2olc_A MTR kinase, methylthior  97.9 5.4E-05 1.8E-09   82.0  11.9   75  435-511    35-120 (397)
293 3jr1_A Putative fructosamine-3  97.7 0.00026 8.8E-09   73.6  12.9  138  435-577    41-232 (312)
294 2pyw_A Uncharacterized protein  97.6 0.00044 1.5E-08   75.4  13.1   77  550-630   231-312 (420)
295 2ppq_A HSK, HK, homoserine kin  97.2 0.00071 2.4E-08   70.7   9.2  158  421-581     8-217 (322)
296 3dxq_A Choline/ethanolamine ki  97.2  0.0015   5E-08   67.6  10.9  128  435-581    23-202 (301)
297 3feg_A Choline/ethanolamine ki  97.2  0.0016 5.5E-08   69.5  11.3  141  436-581    56-254 (379)
298 1zyl_A Hypothetical protein YI  97.2  0.0073 2.5E-07   63.0  16.3  142  436-581    32-223 (328)
299 1nw1_A Choline kinase (49.2 KD  97.2 0.00075 2.6E-08   73.6   8.8   72  436-513    79-159 (429)
300 3csv_A Aminoglycoside phosphot  97.2  0.0029 9.8E-08   66.4  13.0  142  436-582    24-218 (333)
301 2qg7_A Ethanolamine kinase PV0  97.0  0.0028 9.5E-08   69.5  11.5   73  436-513   114-188 (458)
302 3c5i_A Choline kinase; choline  96.6  0.0038 1.3E-07   66.6   8.5   73  436-513    39-121 (369)
303 3i1a_A Spectinomycin phosphotr  96.6   0.022 7.4E-07   59.9  14.1   32  550-581   205-236 (339)
304 2yle_A Protein spire homolog 1  96.1   0.022 7.5E-07   54.8   9.6  102  510-631    32-133 (229)
305 3f2s_A CK, chetk-alpha, cholin  96.1   0.013 4.6E-07   62.6   8.9  142  436-581    58-280 (401)
306 3mes_A Choline kinase; malaria  94.4    0.19 6.6E-06   54.1  11.3  140  436-581    76-291 (424)
307 3g15_A CK, chetk-alpha, cholin  91.9    0.39 1.3E-05   51.4   8.9   30  552-581   245-280 (401)
308 4ano_A ESSB; membrane protein,  82.0     2.9 9.8E-05   40.2   7.2   83  484-579    48-131 (219)
309 4ann_A ESSB; membrane protein,  79.9     2.4 8.2E-05   40.6   5.8  114  484-634    43-157 (215)
310 3no2_A Uncharacterized protein  77.6      38  0.0013   33.4  14.4   66   52-118    25-96  (276)
311 3cxl_A N-chimerin; SH2, RHO-GA  77.0    0.47 1.6E-05   51.8  -0.1   60  434-496   146-214 (463)
312 2ks1_B Epidermal growth factor  76.7     1.2   4E-05   30.7   1.8   14  378-391    27-40  (44)
313 3no2_A Uncharacterized protein  74.2      17 0.00057   36.1  10.6   66   52-117   155-231 (276)
314 2l2t_A Receptor tyrosine-prote  73.2     1.4 4.9E-05   30.2   1.5   14  378-391    26-39  (44)
315 2ll3_A Micronemal protein 4; c  68.5     1.8   6E-05   34.4   1.3   36  297-337    28-63  (82)
316 2k1k_A Ephrin type-A receptor   66.7     2.5 8.4E-05   28.1   1.5   23  366-388    15-37  (38)
317 1dmc_A CD6 metallothionein-1;   52.5     3.9 0.00013   24.8   0.5   15  301-315    15-29  (31)
318 3oja_A Leucine-rich immune mol  51.8     1.4 4.7E-05   48.4  -2.8   31  468-498   321-351 (487)
319 2li3_A Potassium channel toxin  47.6     5.8  0.0002   23.8   0.7   11  305-315    19-29  (30)
320 1cja_A Protein (actin-fragmin   40.6 1.7E+02  0.0058   29.8  10.7  135  437-581    76-237 (342)
321 3isy_A Bsupi, intracellular pr  38.2   1E+02  0.0035   26.2   7.4   15  164-178    89-103 (120)
322 3hms_A Hepatocyte growth facto  33.8      10 0.00034   31.4   0.4   31  298-333    39-73  (101)
323 2klu_A T-cell surface glycopro  32.6      17  0.0006   27.0   1.4   12  367-378    12-23  (70)
324 1zla_K Latent nuclear antigen;  32.2      15 0.00052   20.8   0.8   15  139-153     3-17  (26)
325 2knc_B Integrin beta-3; transm  31.4      16 0.00055   28.7   1.2   22  366-387    12-33  (79)
326 1afo_A Glycophorin A; integral  28.7      24 0.00082   23.2   1.4   25  366-390    14-38  (40)
327 1iij_A ERBB-2 receptor protein  25.0      21 0.00073   23.1   0.7    6  383-388    28-33  (35)
328 2k9y_A Ephrin type-A receptor   21.6      25 0.00085   23.5   0.5    6  383-388    34-39  (41)
329 1c5e_A Head decoration protein  20.4      65  0.0022   25.7   2.7   54   70-132    22-78  (95)

No 1  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=3.4e-53  Score=443.86  Aligned_cols=259  Identities=27%  Similarity=0.440  Sum_probs=215.8

Q ss_pred             cCCCcCCeeecCCcccEEEEEec------CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA------DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  503 (752)
                      ++|.+.++||+|+||+||+|++.      ++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            46777899999999999999864      467899999988777777889999999999999999999999999999999


Q ss_pred             EEeeCCCCCHhHHHhhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCcee
Q 043278          504 VYEFMPNKSLDFFLFNSG----------RKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKI  573 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl  573 (752)
                      |||||++|+|.++|....          ....++|.+++.++.|||+||+|||+++   ||||||||+||||++++.+||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence            999999999999997532          3456999999999999999999999988   999999999999999999999


Q ss_pred             cccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHH
Q 043278          574 SDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQL  652 (752)
Q Consensus       574 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~  652 (752)
                      +|||+|+...............||+.|||||++.+..++.|+|||||||+||||+| |+.||......       .....
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-------~~~~~  242 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-------EVIEC  242 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-------HHHHH
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHH
Confidence            99999987654444334445679999999999999999999999999999999999 89999765421       12223


Q ss_pred             hhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCC
Q 043278          653 LSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNET  707 (752)
Q Consensus       653 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~  707 (752)
                      +..+.....         +......+.+|+.+||+.||++||||+||++.|+++.
T Consensus       243 i~~~~~~~~---------p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~  288 (299)
T 4asz_A          243 ITQGRVLQR---------PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA  288 (299)
T ss_dssp             HHHTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHcCCCCCC---------CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            333332221         1122345778999999999999999999999998764


No 2  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=9.1e-53  Score=446.68  Aligned_cols=260  Identities=27%  Similarity=0.431  Sum_probs=208.5

Q ss_pred             cCCCcCCeeecCCcccEEEEEec------CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA------DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  503 (752)
                      ++|.+.++||+|+||+||+|++.      +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            45667789999999999999864      467899999988777777889999999999999999999999999999999


Q ss_pred             EEeeCCCCCHhHHHhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCc
Q 043278          504 VYEFMPNKSLDFFLFNSGR------------KNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNP  571 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~  571 (752)
                      |||||++|+|.+++.....            ...++|.+++.|+.|||+||+|||+.+   ||||||||+||||++++.+
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence            9999999999999975422            346999999999999999999999988   9999999999999999999


Q ss_pred             eecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHH
Q 043278          572 KISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAW  650 (752)
Q Consensus       572 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~  650 (752)
                      ||+|||+++...............||+.|||||++.+..++.++|||||||+||||+| |+.||......       ...
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-------~~~  270 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-------EAI  270 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-------HHH
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-------HHH
Confidence            9999999997655444444455789999999999999999999999999999999999 89999765421       122


Q ss_pred             HHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCC
Q 043278          651 QLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETM  708 (752)
Q Consensus       651 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~  708 (752)
                      ..+..+.....         +......+.+|+.+||+.||++||||+||+++|+.+..
T Consensus       271 ~~i~~g~~~~~---------p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          271 DCITQGRELER---------PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             HHHHHTCCCCC---------CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCCC---------cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence            22333322211         11123457789999999999999999999999998754


No 3  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=1.2e-52  Score=441.66  Aligned_cols=257  Identities=28%  Similarity=0.411  Sum_probs=212.8

Q ss_pred             CCCcCCeeecCCcccEEEEEec------CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEE
Q 043278          431 NFSTTNKLGEGGFGPVYKGKLA------DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       431 ~~~~~~~LG~G~fg~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  503 (752)
                      .+++.++||+|+||+||+|++.      +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..+|
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  106 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM  106 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence            3445689999999999999863      46789999997553 3456789999999999999999999999999999999


Q ss_pred             EEeeCCCCCHhHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCC
Q 043278          504 VYEFMPNKSLDFFLFNSGR-------------KNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMN  570 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~  570 (752)
                      |||||++|+|.++|.....             ...++|.+++.|+.|||+||+|||+++   ||||||||+||||+++++
T Consensus       107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~  183 (308)
T 4gt4_A          107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN  183 (308)
T ss_dssp             EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred             EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCC
Confidence            9999999999999965321             245999999999999999999999988   999999999999999999


Q ss_pred             ceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHH
Q 043278          571 PKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYA  649 (752)
Q Consensus       571 ~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~  649 (752)
                      +||+|||+++...............||+.|||||++.++.++.|+|||||||+||||+| |+.||.....       ...
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-------~~~  256 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-------QDV  256 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-------HHH
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-------HHH
Confidence            99999999987655444444455789999999999999999999999999999999999 8999976542       112


Q ss_pred             HHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          650 WQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       650 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      ...+..+.....         +......+.+|+.+||+.||++||||+||+++|+..
T Consensus       257 ~~~i~~~~~~~~---------p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          257 VEMIRNRQVLPC---------PDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHcCCCCCC---------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            233344433221         122334577899999999999999999999999864


No 4  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=7.9e-52  Score=433.44  Aligned_cols=263  Identities=25%  Similarity=0.438  Sum_probs=205.4

Q ss_pred             cCCCcCCeeecCCcccEEEEEecCCceeEEEEcccC--CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEee
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRS--SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEF  507 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  507 (752)
                      +++.+.++||+|+||+||+|++.+  .||||+++..  ..+..++|.+|+.++++++|||||+++|++.+ +..+|||||
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy  112 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW  112 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence            567788999999999999998754  5999998754  33445789999999999999999999999865 568999999


Q ss_pred             CCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccccc
Q 043278          508 MPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNES  587 (752)
Q Consensus       508 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~  587 (752)
                      |++|+|.++|...  ...+++.+++.|+.|||+||+|||+++   ||||||||+||||++++++||+|||+|+.......
T Consensus       113 ~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~  187 (307)
T 3omv_A          113 CEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG  187 (307)
T ss_dssp             CSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred             CCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence            9999999999653  345999999999999999999999988   99999999999999999999999999987654443


Q ss_pred             ccccccccccCCccChhhhcc---CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          588 EANTKRIVGTYGYMSPEYAMS---GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       588 ~~~~~~~~gt~~y~aPE~~~~---~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      ........||+.|||||++.+   ..|+.|+|||||||+||||+||+.||......      ......+..+..    .|
T Consensus       188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~------~~~~~~~~~~~~----~p  257 (307)
T 3omv_A          188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGYA----SP  257 (307)
T ss_dssp             ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHTTCC----CC
T ss_pred             ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcCCC----CC
Confidence            334455789999999999864   46999999999999999999999999754421      111222222211    11


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCCCCC
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETMPLP  711 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~~~  711 (752)
                      .+. ..+......+.+|+.+||+.||++||||.||+++|+.+..++|
T Consensus       258 ~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          258 DLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             CST-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             Ccc-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence            111 1112223457789999999999999999999999987765444


No 5  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=9.3e-50  Score=423.62  Aligned_cols=251  Identities=20%  Similarity=0.303  Sum_probs=202.4

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      ++|++.++||+|+||+||+|+.. +|+.||||++....  ....+.+.+|++++++++|||||++++++.+++..+||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            57999999999999999999864 68999999997542  3345678999999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNE  586 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~  586 (752)
                      ||++|+|.+++... +...+++.+++.++.||+.||+|||+++   ||||||||+||||++++.+||+|||+|+.+....
T Consensus       104 y~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  179 (350)
T 4b9d_A          104 YCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV  179 (350)
T ss_dssp             CCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred             CCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence            99999999999653 3345789999999999999999999998   9999999999999999999999999998754321


Q ss_pred             cccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCC
Q 043278          587 SEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSL  666 (752)
Q Consensus       587 ~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  666 (752)
                        ......+||+.|||||++.+..|+.++|||||||+||||++|+.||.....      .....+... +....     +
T Consensus       180 --~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~------~~~~~~i~~-~~~~~-----~  245 (350)
T 4b9d_A          180 --ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM------KNLVLKIIS-GSFPP-----V  245 (350)
T ss_dssp             --HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHH-TCCCC-----C
T ss_pred             --ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHHHc-CCCCC-----C
Confidence              123346899999999999999999999999999999999999999976542      222222222 22111     1


Q ss_pred             CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          667 EQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       667 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ..    .....+.+|+.+||+.||++|||+.|++++
T Consensus       246 ~~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          246 SL----HYSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             CT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             Cc----cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            11    122357789999999999999999999864


No 6  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=1.1e-49  Score=422.41  Aligned_cols=250  Identities=26%  Similarity=0.336  Sum_probs=208.6

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeC
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFM  508 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  508 (752)
                      +.|+..++||+|+||+||+|+.. +|+.||||++........+.+.+|+.+|++++|||||++++++.+++..+||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            56888899999999999999875 68999999997665556667899999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccccc
Q 043278          509 PNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESE  588 (752)
Q Consensus       509 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~  588 (752)
                      ++|+|.+++..    ..+++.++..++.||+.||+|||+++   ||||||||+||||+.++.+||+|||+|+.+....  
T Consensus       154 ~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--  224 (346)
T 4fih_A          154 EGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--  224 (346)
T ss_dssp             TTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--
T ss_pred             CCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCC--
Confidence            99999998854    34899999999999999999999998   9999999999999999999999999998765332  


Q ss_pred             cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCC
Q 043278          589 ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQ  668 (752)
Q Consensus       589 ~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  668 (752)
                      ......+||+.|||||++.+..|+.++|||||||+||||++|+.||......      . ....+..+.     .+.+. 
T Consensus       225 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~-~~~~i~~~~-----~~~~~-  291 (346)
T 4fih_A          225 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL------K-AMKMIRDNL-----PPRLK-  291 (346)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------H-HHHHHHHSS-----CCCCS-
T ss_pred             CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------H-HHHHHHcCC-----CCCCC-
Confidence            2234578999999999999999999999999999999999999999765421      1 112222211     11111 


Q ss_pred             CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          669 PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       669 ~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                       ........+.+|+.+||+.||++|||+.|++++
T Consensus       292 -~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          292 -NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             -CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             -ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence             111223457789999999999999999999874


No 7  
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=3.2e-50  Score=430.50  Aligned_cols=269  Identities=27%  Similarity=0.377  Sum_probs=218.6

Q ss_pred             ccHHHHHHHhcCCCcCCeeecCCcccEEEEEecC------CceeEEEEcccCCc-ccHHHHHHHHHHHHhcCC-CCccee
Q 043278          420 FDFQTIAAAANNFSTTNKLGEGGFGPVYKGKLAD------EQEVAIKRLSRSSG-QGIVEFKNEVRLIAKLQH-TNLVRL  491 (752)
Q Consensus       420 ~~~~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h-~niv~l  491 (752)
                      ++..+.+...++|++.++||+|+||+||+|++..      ++.||||++..... ...++|.+|+++|.+++| ||||++
T Consensus        54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l  133 (353)
T 4ase_A           54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL  133 (353)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence            4445555556889999999999999999998643      35799999976543 345679999999999965 899999


Q ss_pred             eeeeeeC-CeeEEEEeeCCCCCHhHHHhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecC
Q 043278          492 LGCSLHG-EERLLVYEFMPNKSLDFFLFNSG-------------RKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRD  557 (752)
Q Consensus       492 ~~~~~~~-~~~~lv~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~D  557 (752)
                      +|+|.+. +..+||||||++|+|.++|....             ....+++.+++.++.|||+||+|||+++   |||||
T Consensus       134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRD  210 (353)
T 4ase_A          134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD  210 (353)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred             EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCc
Confidence            9999764 56899999999999999997532             1345899999999999999999999998   99999


Q ss_pred             CCCCcEEecCCCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCC
Q 043278          558 LKASNILLDDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTR  636 (752)
Q Consensus       558 ikp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~  636 (752)
                      |||+||||++++.+||+|||+|+.+........+....||+.|||||++.+..|+.|+|||||||+||||+| |+.||..
T Consensus       211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~  290 (353)
T 4ase_A          211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  290 (353)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred             cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence            999999999999999999999997665544444456789999999999999999999999999999999998 8999976


Q ss_pred             CCCCCCcchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          637 HHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       637 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      .....      .....+..+......         .....++.+++.+||+.||++||||.||+++|+.+
T Consensus       291 ~~~~~------~~~~~i~~g~~~~~p---------~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l  345 (353)
T 4ase_A          291 VKIDE------EFCRRLKEGTRMRAP---------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  345 (353)
T ss_dssp             CCCSH------HHHHHHHHTCCCCCC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCHHH------HHHHHHHcCCCCCCC---------ccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            54221      122333333322211         11224577899999999999999999999999765


No 8  
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=4.8e-49  Score=414.98  Aligned_cols=267  Identities=21%  Similarity=0.265  Sum_probs=202.1

Q ss_pred             cCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCC----eeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGE----ERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~  505 (752)
                      ++|.+.++||+|+||+||+|++ .|+.||||++..... ....+..|+..+.+++|||||+++++|.+++    ..+|||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~   80 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence            4567789999999999999998 688999999965422 1222345666667889999999999998654    579999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCcEeecCCCCCcEEecCCCCceecccccce
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKY-----SRLRVIHRDLKASNILLDDKMNPKISDFGMAR  580 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~  580 (752)
                      |||++|+|.+++..    ..++|+.+++++.|+++||+|||++     ..++||||||||+||||++++++||+|||+++
T Consensus        81 Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~  156 (303)
T 3hmm_A           81 DYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             ECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             cCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence            99999999999964    3489999999999999999999986     23459999999999999999999999999998


Q ss_pred             eecccccc--cccccccccCCccChhhhccC------CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC--------cc
Q 043278          581 IFEVNESE--ANTKRIVGTYGYMSPEYAMSG------IVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRP--------LN  644 (752)
Q Consensus       581 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~--------~~  644 (752)
                      ........  .......||+.|||||++.+.      .++.|+|||||||+||||+||++|+........        ..
T Consensus       157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~  236 (303)
T 3hmm_A          157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  236 (303)
T ss_dssp             EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence            76543322  222346899999999999764      478899999999999999999887754332211        00


Q ss_pred             hHHHHHHHhhCCCcccccCCCCCC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          645 LIGYAWQLLSDGKGLELIDPSLEQ-PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       645 l~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      ...........+    .++|.+.. ..+.+....+.+|+.+||+.||++||||.||+++|+.+
T Consensus       237 ~~~~~~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l  295 (303)
T 3hmm_A          237 SVEEMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  295 (303)
T ss_dssp             CHHHHHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            111222222221    12232221 12345667788999999999999999999999999865


No 9  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=4.8e-49  Score=416.25  Aligned_cols=252  Identities=20%  Similarity=0.252  Sum_probs=203.8

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeC
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFM  508 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  508 (752)
                      +.|...++||+|+||+||+|+.. +|+.||||+++....     ..+|+.++++++|||||++++++.+++..+||||||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  132 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL  132 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            45777889999999999999874 589999999976432     257999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCC-Cceecccccceeeccccc
Q 043278          509 PNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKM-NPKISDFGMARIFEVNES  587 (752)
Q Consensus       509 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~-~~kl~DFgla~~~~~~~~  587 (752)
                      ++|+|.+++...   ..+++..+..++.||+.||+|||+++   ||||||||+||||+.++ .+||+|||+|+.+.....
T Consensus       133 ~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~  206 (336)
T 4g3f_A          133 EGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL  206 (336)
T ss_dssp             TTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred             CCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence            999999999653   35999999999999999999999998   99999999999999987 699999999997654322


Q ss_pred             c---cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          588 E---ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       588 ~---~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      .   ......+||+.|||||++.+..++.++|||||||+||||++|+.||..........      ..........-   
T Consensus       207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~------~i~~~~~~~~~---  277 (336)
T 4g3f_A          207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL------KIASEPPPIRE---  277 (336)
T ss_dssp             -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHH------HHHHSCCGGGG---
T ss_pred             ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH------HHHcCCCCchh---
Confidence            1   12234689999999999999999999999999999999999999998765443221      11222111111   


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                       +    +......+.+++.+||+.||.+|||+.|+++.|...
T Consensus       278 -~----~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          278 -I----PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             -S----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -c----CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence             1    111234567889999999999999999999887543


No 10 
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=8.2e-49  Score=409.50  Aligned_cols=248  Identities=23%  Similarity=0.311  Sum_probs=208.4

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccC---CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRS---SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ++|++.+.||+|+||+||+|+.. +++.||||++.+.   .......+.+|+++|++++|||||++++++.+++..+|||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            46899999999999999999864 6899999999753   2345677899999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      ||+++|+|.+++...   ..+++..+..++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+|+.+...
T Consensus       112 Ey~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~  185 (311)
T 4aw0_A          112 SYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  185 (311)
T ss_dssp             CCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence            999999999999653   35999999999999999999999998   999999999999999999999999999987654


Q ss_pred             ccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCC
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPS  665 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  665 (752)
                      .........+||+.|||||++.+..|+.++||||+||+||||++|+.||.....      ........ .+..      .
T Consensus       186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~~~i~-~~~~------~  252 (311)
T 4aw0_A          186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE------GLIFAKII-KLEY------D  252 (311)
T ss_dssp             TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH-HTCC------C
T ss_pred             CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHH-cCCC------C
Confidence            444445567999999999999999999999999999999999999999976442      11112222 2211      1


Q ss_pred             CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 043278          666 LEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVV  700 (752)
Q Consensus       666 l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~  700 (752)
                      +....    ...+.+|+.+||+.||++|||++|++
T Consensus       253 ~p~~~----s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          253 FPEKF----FPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             CCTTC----CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             CCccc----CHHHHHHHHHHccCCHhHCcChHHHc
Confidence            11112    23567899999999999999999863


No 11 
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=4.8e-48  Score=419.80  Aligned_cols=250  Identities=26%  Similarity=0.339  Sum_probs=208.8

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeC
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFM  508 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  508 (752)
                      +.|+..++||+|+||.||+|+.. +|+.||||++........+.+.+|+.+|++++|||||++++++.+++..+||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            56888999999999999999875 58999999998766666677899999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccccc
Q 043278          509 PNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESE  588 (752)
Q Consensus       509 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~  588 (752)
                      ++|+|.+++..    ..+++.++..++.||+.||+|||+++   ||||||||+||||+.++.+||+|||+|+.+....  
T Consensus       231 ~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--  301 (423)
T 4fie_A          231 EGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--  301 (423)
T ss_dssp             TTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--
T ss_pred             CCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC--
Confidence            99999998853    34899999999999999999999998   9999999999999999999999999998765332  


Q ss_pred             cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCC
Q 043278          589 ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQ  668 (752)
Q Consensus       589 ~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  668 (752)
                      ......+||+.|||||++.+..|+.++|||||||+||||++|+.||......      . ....+..+.     .+.+..
T Consensus       302 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~-~~~~i~~~~-----~~~~~~  369 (423)
T 4fie_A          302 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL------K-AMKMIRDNL-----PPRLKN  369 (423)
T ss_dssp             CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------H-HHHHHHHSC-----CCCCSC
T ss_pred             ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------H-HHHHHHcCC-----CCCCcc
Confidence            2234578999999999999999999999999999999999999999765421      1 112222211     111111


Q ss_pred             CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          669 PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       669 ~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                        .......+.+|+.+||+.||++|||+.|++++
T Consensus       370 --~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          370 --LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             --TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             --cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence              11112356788999999999999999999874


No 12 
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=8.9e-48  Score=399.83  Aligned_cols=247  Identities=25%  Similarity=0.363  Sum_probs=197.0

Q ss_pred             CcCCeeecCCcccEEEEEec-CCceeEEEEcccC--CcccHHHHHHHHHHHHhcCCCCcceeeeeeee----CCeeEEEE
Q 043278          433 STTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRS--SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLH----GEERLLVY  505 (752)
Q Consensus       433 ~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~  505 (752)
                      ...++||+|+||+||+|... .+..||+|++...  .......|.+|++++++++|||||++++++..    ++..+|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            45578999999999999875 5789999998654  33345679999999999999999999999865    34679999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC-CCCceecccccceeecc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD-KMNPKISDFGMARIFEV  584 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~-~~~~kl~DFgla~~~~~  584 (752)
                      |||++|+|.+++...   ..+++..+..++.||+.||+|||+++ ++||||||||+||||+. ++.+||+|||+|+....
T Consensus       109 Ey~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             ECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             eCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence            999999999999653   45999999999999999999999875 35999999999999984 79999999999985332


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                          ......+||+.|||||++.+ .|+.++|||||||+||||++|+.||.....      .......+..+.....++ 
T Consensus       185 ----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~------~~~~~~~i~~~~~~~~~~-  252 (290)
T 3fpq_A          185 ----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN------AAQIYRRVTSGVKPASFD-  252 (290)
T ss_dssp             ----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS------HHHHHHHHTTTCCCGGGG-
T ss_pred             ----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc------HHHHHHHHHcCCCCCCCC-
Confidence                22345789999999998865 699999999999999999999999965431      111222333322111111 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                         ...+    ..+.+|+.+||+.||++|||++|++++
T Consensus       253 ---~~~~----~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          253 ---KVAI----PEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             ---GCCC----HHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ---ccCC----HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence               1112    246788999999999999999999874


No 13 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2.1e-47  Score=393.45  Aligned_cols=246  Identities=22%  Similarity=0.348  Sum_probs=190.4

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ++|++.+.||+|+||+||+|+.. +++.||||++.+..   ......+.+|+.++++++|||||++++++.+.+..+|||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            58999999999999999999864 68999999997542   334567899999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      ||+ +|+|.+++...   ..+++.++..++.||+.||+|||+++   |+||||||+||||++++++||+|||+|+.....
T Consensus        93 Ey~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~  165 (275)
T 3hyh_A           93 EYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG  165 (275)
T ss_dssp             ECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred             eCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence            999 57898888653   45999999999999999999999998   999999999999999999999999999865432


Q ss_pred             ccccccccccccCCccChhhhccCCC-CccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIV-SIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~-t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      .   .....+||+.|||||++.+..+ +.++||||+||++|||++|+.||.....      .. ..+.+..+..      
T Consensus       166 ~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~------~~-~~~~i~~~~~------  229 (275)
T 3hyh_A          166 N---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI------PV-LFKNISNGVY------  229 (275)
T ss_dssp             ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHTCC------
T ss_pred             C---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH------HH-HHHHHHcCCC------
Confidence            2   2234689999999999998876 5899999999999999999999975431      11 1122222221      


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .+....    ...+.+|+.+||+.||++|||++|++++
T Consensus       230 ~~p~~~----s~~~~~li~~~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          230 TLPKFL----SPGAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             CCCTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred             CCCCCC----CHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            111111    2356788999999999999999999874


No 14 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=1.1e-47  Score=401.06  Aligned_cols=248  Identities=24%  Similarity=0.297  Sum_probs=195.8

Q ss_pred             cCCCcCCeeecCCcccEEEEEec----CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA----DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~----~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  503 (752)
                      ++|++.+.||+|+||+||+|+..    .++.||||++++..  .....++.+|++++++++|||||++++++.+++..+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            57889999999999999999852    46789999997542  2233467899999999999999999999999999999


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      |||||++|+|.+++...   ..+++.++..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+...
T Consensus       104 vmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  177 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESI  177 (304)
T ss_dssp             EECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred             EEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence            99999999999999653   35999999999999999999999998   9999999999999999999999999998654


Q ss_pred             ccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccC
Q 043278          584 VNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELID  663 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  663 (752)
                      ...  ......+||+.|||||++.+..++.++|||||||+||||++|+.||......      ........ +..     
T Consensus       178 ~~~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------~~~~~i~~-~~~-----  243 (304)
T 3ubd_A          178 DHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK------ETMTMILK-AKL-----  243 (304)
T ss_dssp             -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHH-CCC-----
T ss_pred             CCC--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH------HHHHHHHc-CCC-----
Confidence            322  2233478999999999999999999999999999999999999999765421      11112222 111     


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 043278          664 PSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTM-----PEVVCM  702 (752)
Q Consensus       664 ~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~-----~ev~~~  702 (752)
                       .+...    ....+.+|+.+||+.||++|||+     +|++++
T Consensus       244 -~~p~~----~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H  282 (304)
T 3ubd_A          244 -GMPQF----LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH  282 (304)
T ss_dssp             -CCCTT----SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred             -CCCCc----CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence             11111    22356789999999999999984     677653


No 15 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=3.3e-46  Score=391.45  Aligned_cols=256  Identities=24%  Similarity=0.332  Sum_probs=192.4

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc-ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCC--------
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG-QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGE--------  499 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--------  499 (752)
                      ++|++.+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|+.+|++++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            35888899999999999999864 688999999975543 34467899999999999999999999987544        


Q ss_pred             ----eeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecc
Q 043278          500 ----ERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISD  575 (752)
Q Consensus       500 ----~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~D  575 (752)
                          ..+||||||++|+|.+++..........+..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence                36899999999999999976555555677889999999999999999998   99999999999999999999999


Q ss_pred             cccceeeccccccc----------ccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcch
Q 043278          576 FGMARIFEVNESEA----------NTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNL  645 (752)
Q Consensus       576 Fgla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l  645 (752)
                      ||+|+.+.......          .....+||+.|||||++.+..|+.++|||||||+||||++   ||....     ..
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~  233 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ER  233 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HH
Confidence            99998765432211          1234579999999999999999999999999999999996   553211     11


Q ss_pred             HHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--hhcC
Q 043278          646 IGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM--LQNE  706 (752)
Q Consensus       646 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~  706 (752)
                      . .............         ........+.+|+.+||+.||++|||+.|++++  ++++
T Consensus       234 ~-~~~~~~~~~~~p~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~  286 (299)
T 4g31_A          234 V-RTLTDVRNLKFPP---------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL  286 (299)
T ss_dssp             H-HHHHHHHTTCCCH---------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred             H-HHHHHHhcCCCCC---------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence            1 1111222221111         111223345678999999999999999999873  4443


No 16 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=8.8e-45  Score=387.35  Aligned_cols=282  Identities=34%  Similarity=0.597  Sum_probs=248.3

Q ss_pred             HHHHHHHhcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCee
Q 043278          422 FQTIAAAANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEER  501 (752)
Q Consensus       422 ~~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  501 (752)
                      +.++...+++|...+.||+|+||.||+|+..+++.||||++.........++.+|+.++.+++||||+++++++.+++..
T Consensus        31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  110 (321)
T 2qkw_B           31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM  110 (321)
T ss_dssp             CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred             HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence            33445567899999999999999999999888999999999877666778899999999999999999999999999999


Q ss_pred             EEEEeeCCCCCHhHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccce
Q 043278          502 LLVYEFMPNKSLDFFLFNSGR-KNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMAR  580 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~  580 (752)
                      ++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus       111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  187 (321)
T 2qkw_B          111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK  187 (321)
T ss_dssp             EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred             EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccccc
Confidence            999999999999999865432 335899999999999999999999988   9999999999999999999999999998


Q ss_pred             eecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCccc
Q 043278          581 IFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLE  660 (752)
Q Consensus       581 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  660 (752)
                      ...............||+.|+|||++.+..++.++||||||+++|||++|+.||....+........+.......+....
T Consensus       188 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (321)
T 2qkw_B          188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ  267 (321)
T ss_dssp             ECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCS
T ss_pred             ccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHH
Confidence            75433333333445689999999999999999999999999999999999999988877777777777766777777778


Q ss_pred             ccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          661 LIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       661 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      .+++.+......+....+.+++.+|++.||++|||+.||+++|+..
T Consensus       268 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  313 (321)
T 2qkw_B          268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA  313 (321)
T ss_dssp             SSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            8888887778888899999999999999999999999999999865


No 17 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=6.4e-44  Score=381.46  Aligned_cols=293  Identities=40%  Similarity=0.669  Sum_probs=248.1

Q ss_pred             ccccccccHHHHHHHhcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCc-ccHHHHHHHHHHHHhcCCCCcceee
Q 043278          414 SHELKIFDFQTIAAAANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSG-QGIVEFKNEVRLIAKLQHTNLVRLL  492 (752)
Q Consensus       414 ~~~~~~~~~~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~  492 (752)
                      ....+.|++.++....++|+..+.||+|+||.||+|+..+++.||||++..... .....+.+|+.++.+++||||++++
T Consensus        14 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~   93 (326)
T 3uim_A           14 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR   93 (326)
T ss_dssp             -CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred             cCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence            345677899999999999999999999999999999988899999999976532 2233689999999999999999999


Q ss_pred             eeeeeCCeeEEEEeeCCCCCHhHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCc
Q 043278          493 GCSLHGEERLLVYEFMPNKSLDFFLFNSG-RKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNP  571 (752)
Q Consensus       493 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~  571 (752)
                      +++...+..++||||+++|+|.+++.... ....+++..+..++.||+.||+|||+...++|+||||||+|||++.++.+
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~  173 (326)
T 3uim_A           94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA  173 (326)
T ss_dssp             EEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred             EEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence            99999999999999999999999997643 34459999999999999999999999833339999999999999999999


Q ss_pred             eecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCC--CCCCcchHHHH
Q 043278          572 KISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHH--PDRPLNLIGYA  649 (752)
Q Consensus       572 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~--~~~~~~l~~~~  649 (752)
                      ||+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....  .........+.
T Consensus       174 kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  252 (326)
T 3uim_A          174 VVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV  252 (326)
T ss_dssp             EECCCSSCEECCSSSSC-EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred             EeccCccccccCccccc-ccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence            99999999876533222 2234568999999999999999999999999999999999999996321  22333455566


Q ss_pred             HHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCC
Q 043278          650 WQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNET  707 (752)
Q Consensus       650 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~  707 (752)
                      ...........+.+..+......+....+.+++.+|++.||.+|||+.||+++|++..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~  310 (326)
T 3uim_A          253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG  310 (326)
T ss_dssp             TTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred             HHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence            5666666777788888888888999999999999999999999999999999998754


No 18 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=2e-43  Score=384.43  Aligned_cols=264  Identities=21%  Similarity=0.301  Sum_probs=200.9

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeee------CC
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLH------GE  499 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~  499 (752)
                      .++|++.+.||+|+||+||+|+.. +|+.||||+++...  ......+.+|+++|++++|||||++++++..      .+
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            357999999999999999999874 68999999997543  2334568899999999999999999998753      35


Q ss_pred             eeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccc
Q 043278          500 ERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMA  579 (752)
Q Consensus       500 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla  579 (752)
                      ..+||||||+ |+|..++..   ...+++..+..++.||+.||+|||+++   ||||||||+|||++.++.+||+|||+|
T Consensus       133 ~~~ivmE~~~-g~L~~~i~~---~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla  205 (398)
T 4b99_A          133 SVYVVLDLME-SDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMA  205 (398)
T ss_dssp             CEEEEEECCS-EEHHHHHTS---SSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEEEeCCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeeccee
Confidence            7899999996 678888853   456999999999999999999999998   999999999999999999999999999


Q ss_pred             eeecccc--cccccccccccCCccChhhhccC-CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCC
Q 043278          580 RIFEVNE--SEANTKRIVGTYGYMSPEYAMSG-IVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDG  656 (752)
Q Consensus       580 ~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  656 (752)
                      +.+....  ........+||+.|||||++.+. .++.++||||+||++|||++|+.||...........   ........
T Consensus       206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~---I~~~~g~p  282 (398)
T 4b99_A          206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQL---IMMVLGTP  282 (398)
T ss_dssp             BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHH---HHHHHCCC
T ss_pred             eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHH---HHHhcCCC
Confidence            8764332  12233457899999999998875 579999999999999999999999987653221111   11111110


Q ss_pred             Cccc-----------ccCC-CCCCCCCHH-----HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          657 KGLE-----------LIDP-SLEQPCSAN-----EVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       657 ~~~~-----------~~d~-~l~~~~~~~-----~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ....           .+.. ....+.+.+     ....+.+|+.+||+.||.+|||+.|++++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            0000           0000 000011111     12356789999999999999999999875


No 19 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=5.4e-43  Score=377.06  Aligned_cols=201  Identities=23%  Similarity=0.386  Sum_probs=172.1

Q ss_pred             HHhcCCCcCCeeecCCcccEEEEEec----CCceeEEEEcccCCcccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCee
Q 043278          427 AAANNFSTTNKLGEGGFGPVYKGKLA----DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEER  501 (752)
Q Consensus       427 ~~~~~~~~~~~LG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  501 (752)
                      ...++|++.++||+|+||+||+|+.+    .++.||||++....  ...++.+|+++|..+ +|||||++++++.+.++.
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence            35688999999999999999999753    46789999986543  345678999999998 699999999999999999


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCC-CCceecccccce
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDK-MNPKISDFGMAR  580 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~-~~~kl~DFgla~  580 (752)
                      +|||||+++|+|.+++.      .+++.++..++.||+.||+|||+++   |+||||||+||||+.+ +.+||+|||+|+
T Consensus        96 ~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~  166 (361)
T 4f9c_A           96 VIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQ  166 (361)
T ss_dssp             EEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence            99999999999999882      3899999999999999999999998   9999999999999876 799999999998


Q ss_pred             eecccccc--------------------------cccccccccCCccChhhhccC-CCCccchhHHHHHHHHHHHhCCCC
Q 043278          581 IFEVNESE--------------------------ANTKRIVGTYGYMSPEYAMSG-IVSIKTDVFSFGVLVLEIVSGQKN  633 (752)
Q Consensus       581 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~t~k~DV~S~G~vl~elltG~~p  633 (752)
                      ........                          ......+||+.|||||++.+. .++.++||||+||++|||++|+.|
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P  246 (361)
T 4f9c_A          167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP  246 (361)
T ss_dssp             ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred             ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence            65432110                          112235799999999999875 589999999999999999999999


Q ss_pred             CCCCC
Q 043278          634 HTRHH  638 (752)
Q Consensus       634 ~~~~~  638 (752)
                      |....
T Consensus       247 f~~~~  251 (361)
T 4f9c_A          247 FYKAS  251 (361)
T ss_dssp             SSCCS
T ss_pred             CCCCC
Confidence            96543


No 20 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=4.9e-43  Score=400.03  Aligned_cols=252  Identities=22%  Similarity=0.287  Sum_probs=208.2

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeC
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFM  508 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  508 (752)
                      ++|++.+.||+|+||.||+++.. +|+.||+|++..........+.+|+.+|++++|||||++++++.+.+..+||||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            57889999999999999999874 68999999998776666678899999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCC--CCceecccccceeecccc
Q 043278          509 PNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDK--MNPKISDFGMARIFEVNE  586 (752)
Q Consensus       509 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~--~~~kl~DFgla~~~~~~~  586 (752)
                      ++|+|.+++..  ....+++.++..++.||+.||+|||+++   |+||||||+|||++.+  +.+||+|||+++.+....
T Consensus       237 ~gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~  311 (573)
T 3uto_A          237 SGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ  311 (573)
T ss_dssp             CCCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred             CCCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCCC
Confidence            99999998853  3346999999999999999999999998   9999999999999854  899999999999765332


Q ss_pred             cccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCC
Q 043278          587 SEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSL  666 (752)
Q Consensus       587 ~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  666 (752)
                         .....+||+.|||||++.+..|+.++|||||||+||||++|+.||......      . ....+...... + .+..
T Consensus       312 ---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~------~-~~~~i~~~~~~-~-~~~~  379 (573)
T 3uto_A          312 ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD------E-TLRNVKSCDWN-M-DDSA  379 (573)
T ss_dssp             ---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH------H-HHHHHHTTCCC-C-CSGG
T ss_pred             ---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------H-HHHHHHhCCCC-C-Cccc
Confidence               223468999999999999999999999999999999999999999765421      1 11222222110 0 1111


Q ss_pred             CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          667 EQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       667 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ...    ....+.+|+.+||+.||.+|||+.|++++
T Consensus       380 ~~~----~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          380 FSG----ISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             GTT----SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             ccC----CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            011    12356788999999999999999999885


No 21 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=2.2e-41  Score=358.55  Aligned_cols=285  Identities=36%  Similarity=0.571  Sum_probs=234.1

Q ss_pred             cccccccHHHHHHHhcCCCcC------CeeecCCcccEEEEEecCCceeEEEEcccCC----cccHHHHHHHHHHHHhcC
Q 043278          415 HELKIFDFQTIAAAANNFSTT------NKLGEGGFGPVYKGKLADEQEVAIKRLSRSS----GQGIVEFKNEVRLIAKLQ  484 (752)
Q Consensus       415 ~~~~~~~~~~i~~~~~~~~~~------~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~  484 (752)
                      .....|++.++..++++|...      +.||+|+||.||+|.. +++.||||++....    ......+.+|+.++.+++
T Consensus        10 ~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~   88 (307)
T 2nru_A           10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ   88 (307)
T ss_dssp             -CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred             CCCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence            345779999999999999888      8999999999999987 67899999986532    234567899999999999


Q ss_pred             CCCcceeeeeeeeCCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEE
Q 043278          485 HTNLVRLLGCSLHGEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNIL  564 (752)
Q Consensus       485 h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIl  564 (752)
                      ||||+++++++.+.+..++||||+++++|.+++........+++..++.++.||+.||+|||+.+   |+||||||+|||
T Consensus        89 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil  165 (307)
T 2nru_A           89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANIL  165 (307)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEE
T ss_pred             CCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEE
Confidence            99999999999999999999999999999999976555567999999999999999999999998   999999999999


Q ss_pred             ecCCCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcc
Q 043278          565 LDDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLN  644 (752)
Q Consensus       565 l~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~  644 (752)
                      +++++.+||+|||+++...............|++.|+|||.+.+ .++.++||||||+++|||++|+.||..........
T Consensus       166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~  244 (307)
T 2nru_A          166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL  244 (307)
T ss_dssp             ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT
T ss_pred             EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH
Confidence            99999999999999987654333333344678999999998765 58999999999999999999999998765433222


Q ss_pred             hHHHHHHHhh-CCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCC
Q 043278          645 LIGYAWQLLS-DGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNET  707 (752)
Q Consensus       645 l~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~  707 (752)
                      .  ....... .....+.+++.+ ...+......+.+++.+|++.||.+|||+.||+++|+.+.
T Consensus       245 ~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          245 D--IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             H--HHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             H--HHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            1  1111111 122233444443 3346677788999999999999999999999999998754


No 22 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=2e-42  Score=392.04  Aligned_cols=249  Identities=25%  Similarity=0.312  Sum_probs=199.0

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHH---HHHHHHhcCCCCcceeeeeeeeCCeeE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKN---EVRLIAKLQHTNLVRLLGCSLHGEERL  502 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~---E~~~l~~l~h~niv~l~~~~~~~~~~~  502 (752)
                      ++|++.++||+|+||+||+++.. +|+.||||++.+..   ......+.+   ++.++..++|||||++++++.+.+..+
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            57899999999999999999875 58999999996431   222333333   456667789999999999999999999


Q ss_pred             EEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceee
Q 043278          503 LVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIF  582 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~  582 (752)
                      ||||||++|+|..+|...   ..+++..+..++.||+.||+|||+++   ||||||||+||||+.+|++||+|||+|+.+
T Consensus       269 lVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~  342 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF  342 (689)
T ss_dssp             EEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeec
Confidence            999999999999999653   35999999999999999999999998   999999999999999999999999999876


Q ss_pred             cccccccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccc
Q 043278          583 EVNESEANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLEL  661 (752)
Q Consensus       583 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  661 (752)
                      ....    ....+||+.|||||++.. ..|+.++|+|||||+||||++|+.||..........+   ....... .    
T Consensus       343 ~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i---~~~i~~~-~----  410 (689)
T 3v5w_A          343 SKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI---DRMTLTM-A----  410 (689)
T ss_dssp             SSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHH---HHHHHHC-C----
T ss_pred             CCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH---HHhhcCC-C----
Confidence            4332    334789999999999975 5799999999999999999999999976543322111   1111111 1    


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 043278          662 IDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPT-----MPEVVCM  702 (752)
Q Consensus       662 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt-----~~ev~~~  702 (752)
                        ..+    +......+.+|+.+||+.||.+|++     ++||.++
T Consensus       411 --~~~----p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H  450 (689)
T 3v5w_A          411 --VEL----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  450 (689)
T ss_dssp             --CCC----CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred             --CCC----CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence              011    1112235678999999999999998     6787764


No 23 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=1.8e-41  Score=368.74  Aligned_cols=258  Identities=25%  Similarity=0.398  Sum_probs=211.4

Q ss_pred             cCCCcCCeeecCCcccEEEEEec--------CCceeEEEEcccCC-cccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCC
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA--------DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGE  499 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  499 (752)
                      ++|.+.+.||+|+||.||+|+..        ++..||||+++... .....++.+|+.++.++ +||||+++++++.+.+
T Consensus        81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  160 (370)
T 2psq_A           81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG  160 (370)
T ss_dssp             GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred             HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence            67888899999999999999852        34579999997653 23456789999999999 8999999999999999


Q ss_pred             eeEEEEeeCCCCCHhHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEec
Q 043278          500 ERLLVYEFMPNKSLDFFLFNSGR-------------KNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLD  566 (752)
Q Consensus       500 ~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~  566 (752)
                      ..++||||+++|+|.+++.....             ...+++..++.++.||+.||+|||+++   |+||||||+||||+
T Consensus       161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~  237 (370)
T 2psq_A          161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVT  237 (370)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEC
T ss_pred             CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEEC
Confidence            99999999999999999976432             235899999999999999999999998   99999999999999


Q ss_pred             CCCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcch
Q 043278          567 DKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNL  645 (752)
Q Consensus       567 ~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l  645 (752)
                      .++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||.......   +
T Consensus       238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~---~  314 (370)
T 2psq_A          238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---L  314 (370)
T ss_dssp             TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---H
T ss_pred             CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---H
Confidence            999999999999987654433333344567889999999999999999999999999999999 999987654221   1


Q ss_pred             HHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          646 IGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       646 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                          ...+..+.....         +......+.+++.+||+.||.+|||+.|+++.|+.+
T Consensus       315 ----~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i  362 (370)
T 2psq_A          315 ----FKLLKEGHRMDK---------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  362 (370)
T ss_dssp             ----HHHHHTTCCCCC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----HHHHhcCCCCCC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                122222221111         112234577899999999999999999999999875


No 24 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=3.1e-41  Score=357.73  Aligned_cols=262  Identities=26%  Similarity=0.434  Sum_probs=204.2

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ..++|++.+.||+|+||+||+|+. .++.||||++....  .....++.+|+.++.+++||||+++++++.+.+..++||
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT  113 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred             ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence            356888899999999999999987 67889999987653  334467899999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      ||+++|+|.+++........+++..++.++.||+.||+|||+.+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~  192 (309)
T 3p86_A          114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST  192 (309)
T ss_dssp             ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred             ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence            99999999999975443445999999999999999999999875 34999999999999999999999999999854322


Q ss_pred             ccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCC
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPS  665 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  665 (752)
                      .  .......||+.|+|||.+.+..++.++||||||+++|||++|+.||......      ..............     
T Consensus       193 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~------~~~~~~~~~~~~~~-----  259 (309)
T 3p86_A          193 F--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA------QVVAAVGFKCKRLE-----  259 (309)
T ss_dssp             -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH------HHHHHHHHSCCCCC-----
T ss_pred             c--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhcCCCCC-----
Confidence            1  1223467899999999999999999999999999999999999999755421      11111111111111     


Q ss_pred             CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCC
Q 043278          666 LEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETM  708 (752)
Q Consensus       666 l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~  708 (752)
                      +    +......+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus       260 ~----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          260 I----PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             C----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            1    11122357789999999999999999999999988754


No 25 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=8.5e-42  Score=364.38  Aligned_cols=268  Identities=25%  Similarity=0.354  Sum_probs=209.4

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCC----eeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGE----ERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv  504 (752)
                      .++|++.++||+|+||.||+|+.. ++.||||++.... .....+..|+.++.+++||||+++++++.+..    ..++|
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            367888999999999999999875 7899999996543 23445667899999999999999999998754    46999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-------CCCcEeecCCCCCcEEecCCCCceecccc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKY-------SRLRVIHRDLKASNILLDDKMNPKISDFG  577 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-------~~~~iiH~Dikp~NIll~~~~~~kl~DFg  577 (752)
                      |||+++|+|.+++..    ..+++..+..++.||+.||+|||+.       ...+|+||||||+|||++.++.+||+|||
T Consensus       101 ~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg  176 (322)
T 3soc_A          101 TAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG  176 (322)
T ss_dssp             EECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             EecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence            999999999999954    3489999999999999999999987       01139999999999999999999999999


Q ss_pred             cceeecccccccccccccccCCccChhhhcc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHH-----
Q 043278          578 MARIFEVNESEANTKRIVGTYGYMSPEYAMS-----GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIG-----  647 (752)
Q Consensus       578 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~-----  647 (752)
                      +++...............||+.|+|||++.+     ..++.++||||||+++|||++|+.||.............     
T Consensus       177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~  256 (322)
T 3soc_A          177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH  256 (322)
T ss_dssp             TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred             cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence            9987765444333445679999999999987     356678999999999999999999998765433221111     


Q ss_pred             ----HHHHHhhCCCcccccCCCCCC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          648 ----YAWQLLSDGKGLELIDPSLEQ-PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       648 ----~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                          ...........    .+.+.. .........+.+++.+||+.||++|||+.||++.|+.+
T Consensus       257 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l  316 (322)
T 3soc_A          257 PSLEDMQEVVVHKKK----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM  316 (322)
T ss_dssp             CCHHHHHHHHTTSCC----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CchhhhhhhhhcccC----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                11111111111    111111 11234556788999999999999999999999999864


No 26 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=5.6e-41  Score=356.03  Aligned_cols=258  Identities=23%  Similarity=0.392  Sum_probs=210.4

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeC
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFM  508 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  508 (752)
                      ++|.+.+.||+|+||+||++... +++.||+|++..........+.+|++++.+++||||+++++++.+++..++||||+
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            57888899999999999999875 58899999997777777788999999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccccc
Q 043278          509 PNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESE  588 (752)
Q Consensus       509 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~  588 (752)
                      ++++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++........
T Consensus        90 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  164 (310)
T 3s95_A           90 KGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ  164 (310)
T ss_dssp             TTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred             CCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence            999999999653  345899999999999999999999998   999999999999999999999999999876433221


Q ss_pred             c------------ccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCC
Q 043278          589 A------------NTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDG  656 (752)
Q Consensus       589 ~------------~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  656 (752)
                      .            ......||+.|+|||.+.+..++.++||||||+++|||++|..|+.............. ...... 
T Consensus       165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-~~~~~~-  242 (310)
T 3s95_A          165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV-RGFLDR-  242 (310)
T ss_dssp             ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCH-HHHHHH-
T ss_pred             ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhh-hccccc-
Confidence            1            11145789999999999999999999999999999999999999876543322111000 000000 


Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          657 KGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       657 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                          ...+    .    ....+.+++.+|++.||++|||+.|+++.|+.+
T Consensus       243 ----~~~~----~----~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l  280 (310)
T 3s95_A          243 ----YCPP----N----CPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL  280 (310)
T ss_dssp             ----TCCT----T----CCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----cCCC----C----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                0001    1    112467899999999999999999999999876


No 27 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=7.4e-41  Score=352.83  Aligned_cols=251  Identities=25%  Similarity=0.371  Sum_probs=208.6

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEF  507 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  507 (752)
                      .++|.+.+.||+|+||+||+|.. .+++.||||++..........+.+|+.++.+++||||+++++++..++..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            46899999999999999999986 56889999999776666677889999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccccc
Q 043278          508 MPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNES  587 (752)
Q Consensus       508 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~  587 (752)
                      +++++|.+++...    .+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++........
T Consensus        99 ~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  171 (297)
T 3fxz_A           99 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (297)
T ss_dssp             CTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             CCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc
Confidence            9999999998542    4899999999999999999999998   99999999999999999999999999987653322


Q ss_pred             ccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCC
Q 043278          588 EANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLE  667 (752)
Q Consensus       588 ~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  667 (752)
                        ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......      .........+. ..+      
T Consensus       172 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~~~~~~-~~~------  236 (297)
T 3fxz_A          172 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYLIATNGT-PEL------  236 (297)
T ss_dssp             --CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHHCS-CCC------
T ss_pred             --ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCC-CCC------
Confidence              223467899999999999999999999999999999999999999765421      11111111111 011      


Q ss_pred             CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          668 QPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       668 ~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                       ..+......+.+++.+||+.||.+|||+.|++++
T Consensus       237 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          237 -QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             -SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             -CCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence             0111223457789999999999999999999874


No 28 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=4.2e-40  Score=351.05  Aligned_cols=262  Identities=28%  Similarity=0.364  Sum_probs=215.5

Q ss_pred             ccccHHHHHHHhcC----------CCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCC
Q 043278          418 KIFDFQTIAAAANN----------FSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHT  486 (752)
Q Consensus       418 ~~~~~~~i~~~~~~----------~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~  486 (752)
                      ..++++++..+++.          |...+.||+|+||.||+|+.. +|+.||||++..........+.+|+.++.+++||
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            45788888887765          666789999999999999976 6899999999877767778899999999999999


Q ss_pred             CcceeeeeeeeCCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEec
Q 043278          487 NLVRLLGCSLHGEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLD  566 (752)
Q Consensus       487 niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~  566 (752)
                      ||+++++++..++..++||||+++++|.+++..    ..+++..+..++.||+.||+|||+.+   |+||||||+|||++
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~  175 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLT  175 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEC
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEC
Confidence            999999999999999999999999999998842    35899999999999999999999988   99999999999999


Q ss_pred             CCCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchH
Q 043278          567 DKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLI  646 (752)
Q Consensus       567 ~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~  646 (752)
                      .++.+||+|||++........  ......||+.|+|||++.+..++.++||||||+++|||++|+.||......      
T Consensus       176 ~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~------  247 (321)
T 2c30_A          176 LDGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV------  247 (321)
T ss_dssp             TTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------
T ss_pred             CCCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------
Confidence            999999999999987653321  223467899999999999999999999999999999999999999754321      


Q ss_pred             HHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          647 GYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       647 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      . ....+.....     +.+..  .......+.+++.+||+.||++|||+.|+++.
T Consensus       248 ~-~~~~~~~~~~-----~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          248 Q-AMKRLRDSPP-----PKLKN--SHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             H-HHHHHHHSSC-----CCCTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             H-HHHHHhcCCC-----CCcCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1 1112222111     11111  11122356788899999999999999999885


No 29 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=3.5e-41  Score=360.00  Aligned_cols=259  Identities=27%  Similarity=0.433  Sum_probs=207.7

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec----CCceeEEEEcccC-CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA----DEQEVAIKRLSRS-SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~----~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  503 (752)
                      .++|.+.+.||+|+||.||+|...    .+..||||+++.. .......+.+|+.++.+++||||+++++++.+++..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            357888899999999999999874    3445999999765 33445678999999999999999999999999999999


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      ||||+++++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus       128 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  202 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLE  202 (325)
T ss_dssp             EEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             EeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence            99999999999998543  345999999999999999999999998   9999999999999999999999999998765


Q ss_pred             cccccc-ccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccc
Q 043278          584 VNESEA-NTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLEL  661 (752)
Q Consensus       584 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  661 (752)
                      ...... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......       .....+..+...  
T Consensus       203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-------~~~~~~~~~~~~--  273 (325)
T 3kul_A          203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-------DVISSVEEGYRL--  273 (325)
T ss_dssp             ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-------HHHHHHHTTCCC--
T ss_pred             cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-------HHHHHHHcCCCC--
Confidence            432211 1223455778999999999999999999999999999999 99998654321       112222222111  


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCC
Q 043278          662 IDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETM  708 (752)
Q Consensus       662 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~  708 (752)
                             +.+......+.+++.+||+.||.+|||+.||+++|+.+..
T Consensus       274 -------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~  313 (325)
T 3kul_A          274 -------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR  313 (325)
T ss_dssp             -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence                   1112223467789999999999999999999999988643


No 30 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=5.3e-41  Score=365.36  Aligned_cols=257  Identities=28%  Similarity=0.452  Sum_probs=198.0

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec----CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA----DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~----~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  503 (752)
                      .++|++.+.||+|+||.||+|+..    .+..||||+++... .....+|.+|+.++.+++||||+++++++.+++..++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            357899999999999999999865    56789999997653 3345679999999999999999999999999999999


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      ||||+++|+|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus       124 v~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  198 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLE  198 (373)
T ss_dssp             EEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             EEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence            99999999999999643  345899999999999999999999998   9999999999999999999999999998765


Q ss_pred             cccccc-ccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccc
Q 043278          584 VNESEA-NTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLEL  661 (752)
Q Consensus       584 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  661 (752)
                      ...... ......++..|+|||++.+..++.++||||||+++|||++ |+.||......       .....+..+..   
T Consensus       199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-------~~~~~i~~~~~---  268 (373)
T 2qol_A          199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------DVIKAVDEGYR---  268 (373)
T ss_dssp             ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-------HHHHHHHTTEE---
T ss_pred             cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCC---
Confidence            432211 1222345778999999999999999999999999999998 99998654311       11122222211   


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          662 IDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       662 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                            .+.+......+.+++.+||+.||.+||++.||+++|+.+
T Consensus       269 ------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~  307 (373)
T 2qol_A          269 ------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL  307 (373)
T ss_dssp             ------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence                  111222335678899999999999999999999999875


No 31 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=2.4e-41  Score=369.00  Aligned_cols=257  Identities=26%  Similarity=0.356  Sum_probs=208.6

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc-ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG-QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      .++|.+.+.||+|+||.||+|+.. +++.||||.++.... ....+|.+|++++.+++||||+++++++.+++..++|||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            357788899999999999999986 688999999875432 233468899999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNE  586 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~  586 (752)
                      |+++|+|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......
T Consensus       193 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~  267 (377)
T 3cbl_A          193 LVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV  267 (377)
T ss_dssp             CCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred             cCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence            99999999998653  234899999999999999999999998   9999999999999999999999999998654332


Q ss_pred             cccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCC
Q 043278          587 SEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPS  665 (752)
Q Consensus       587 ~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  665 (752)
                      .........++..|+|||.+....++.++||||||+++|||++ |+.||......       .....+..+.....    
T Consensus       268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~~----  336 (377)
T 3cbl_A          268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-------QTREFVEKGGRLPC----  336 (377)
T ss_dssp             EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-------HHHHHHHTTCCCCC----
T ss_pred             eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCCCCC----
Confidence            2222222345778999999999999999999999999999998 99998765421       12222323221111    


Q ss_pred             CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          666 LEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       666 l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                           +......+.+++.+||+.||++|||+.++++.|+.+
T Consensus       337 -----~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          337 -----PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             -----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence                 111224577899999999999999999999999864


No 32 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=4.9e-41  Score=359.28  Aligned_cols=255  Identities=27%  Similarity=0.420  Sum_probs=200.1

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCce----eEEEEcccC-CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQE----VAIKRLSRS-SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~----vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  503 (752)
                      ++|+..++||+|+||+||+|+.. +++.    ||+|.+... ......++.+|+.++.+++||||+++++++.++. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            57888899999999999999864 3443    588888644 3356678999999999999999999999998754 789


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      |+||+++|+|.+++....  ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        94 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~  168 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             EEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred             EEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence            999999999999997643  45899999999999999999999998   9999999999999999999999999998765


Q ss_pred             ccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCccccc
Q 043278          584 VNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  662 (752)
                      ............+|..|+|||.+.+..++.++||||||+++|||++ |+.||.......   +    ...+..+...   
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~----~~~~~~~~~~---  238 (327)
T 3poz_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---I----SSILEKGERL---  238 (327)
T ss_dssp             TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---H----HHHHHTTCCC---
T ss_pred             CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---H----HHHHHcCCCC---
Confidence            4443333334566889999999999999999999999999999999 999997654221   1    1222222111   


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                            ..+......+.+++.+||+.||.+|||+.|++++|+.+
T Consensus       239 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  276 (327)
T 3poz_A          239 ------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  276 (327)
T ss_dssp             ------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred             ------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence                  11122234577899999999999999999999999764


No 33 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=7.1e-41  Score=363.74  Aligned_cols=258  Identities=31%  Similarity=0.435  Sum_probs=209.3

Q ss_pred             cCCCcCCeeecCCcccEEEEEec------CCceeEEEEcccC-CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA------DEQEVAIKRLSRS-SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERL  502 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~------~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  502 (752)
                      ++|.+.++||+|+||.||+|+..      .++.||||++... ......++.+|+.++.+++||||+++++++.++...+
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            57888899999999999999853      4568999999754 3344567889999999999999999999999999999


Q ss_pred             EEEeeCCCCCHhHHHhhcC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCC---Cceecc
Q 043278          503 LVYEFMPNKSLDFFLFNSG----RKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKM---NPKISD  575 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~---~~kl~D  575 (752)
                      +||||+++|+|.+++....    ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++   .+||+|
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~D  227 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGD  227 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEECC
Confidence            9999999999999997643    2245899999999999999999999998   99999999999999555   599999


Q ss_pred             cccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhh
Q 043278          576 FGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLS  654 (752)
Q Consensus       576 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~  654 (752)
                      ||+++...............+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......       .....+.
T Consensus       228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~-------~~~~~i~  300 (367)
T 3l9p_A          228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-------EVLEFVT  300 (367)
T ss_dssp             CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-------HHHHHHH
T ss_pred             CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHH
Confidence            999986543333333344667899999999999999999999999999999998 99998765421       1122222


Q ss_pred             CCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          655 DGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       655 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      .+.....         +......+.+|+.+||+.||.+|||+.||++.|+..
T Consensus       301 ~~~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          301 SGGRMDP---------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             TTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCCCC---------CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            2221111         111223577899999999999999999999999765


No 34 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=5e-40  Score=351.06  Aligned_cols=247  Identities=24%  Similarity=0.365  Sum_probs=204.3

Q ss_pred             cCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccC--CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRS--SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      ++|.+.+.||+|+||.||+|+. .+|+.||||++...  .......+.+|++++++++||||+++++++...+..++|||
T Consensus        15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e   94 (328)
T 3fe3_A           15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME   94 (328)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEE
Confidence            5788899999999999999987 57899999998654  33345678899999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNE  586 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~  586 (752)
                      |+++++|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......
T Consensus        95 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  168 (328)
T 3fe3_A           95 YASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG  168 (328)
T ss_dssp             CCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred             CCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence            99999999998654   34899999999999999999999998   9999999999999999999999999997654322


Q ss_pred             cccccccccccCCccChhhhccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCC
Q 043278          587 SEANTKRIVGTYGYMSPEYAMSGIVS-IKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPS  665 (752)
Q Consensus       587 ~~~~~~~~~gt~~y~aPE~~~~~~~t-~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  665 (752)
                         ......||+.|+|||++.+..++ .++|||||||++|||++|+.||.....      ... ...+..+...      
T Consensus       169 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~-~~~i~~~~~~------  232 (328)
T 3fe3_A          169 ---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL------KEL-RERVLRGKYR------  232 (328)
T ss_dssp             ---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHH-HHHHHHCCCC------
T ss_pred             ---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH------HHH-HHHHHhCCCC------
Confidence               22346799999999999988765 899999999999999999999976541      111 1222222110      


Q ss_pred             CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          666 LEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       666 l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      +    +......+.+++.+|++.||.+|||++|++++
T Consensus       233 ~----p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          233 I----PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             C----CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             C----CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            1    11122356788999999999999999999875


No 35 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.7e-40  Score=344.80  Aligned_cols=254  Identities=28%  Similarity=0.416  Sum_probs=209.3

Q ss_pred             cCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeCC
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFMP  509 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  509 (752)
                      ++|.+.+.||+|+||.||++...+++.||+|++.... ...+++.+|+.++.+++||||+++++++.+++..++||||++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            5688889999999999999999888999999997653 345679999999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccccccc
Q 043278          510 NKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESEA  589 (752)
Q Consensus       510 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~~  589 (752)
                      +++|.+++...  ...+++..++.++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++....... .
T Consensus        89 ~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~  162 (269)
T 4hcu_A           89 HGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-T  162 (269)
T ss_dssp             TCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH-H
T ss_pred             CCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccccc-c
Confidence            99999998543  345899999999999999999999998   99999999999999999999999999986543321 1


Q ss_pred             ccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCC
Q 043278          590 NTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQ  668 (752)
Q Consensus       590 ~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  668 (752)
                      ......+++.|+|||.+.+..++.++||||||++++||++ |+.||......       .....+..+..  ...+    
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-------~~~~~~~~~~~--~~~~----  229 (269)
T 4hcu_A          163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-------EVVEDISTGFR--LYKP----  229 (269)
T ss_dssp             STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHTTCC--CCCC----
T ss_pred             cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-------HHHHHHhcCcc--CCCC----
Confidence            2223456778999999999999999999999999999999 89998754421       11122222211  1111    


Q ss_pred             CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          669 PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       669 ~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                         ......+.+++.+|++.||.+|||+.|++++|+.+
T Consensus       230 ---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l  264 (269)
T 4hcu_A          230 ---RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI  264 (269)
T ss_dssp             ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence               11124577889999999999999999999999865


No 36 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=3.7e-41  Score=365.03  Aligned_cols=269  Identities=27%  Similarity=0.391  Sum_probs=214.9

Q ss_pred             ccHHHHHHHhcCCCcCCeeecCCcccEEEEEe------cCCceeEEEEcccCC-cccHHHHHHHHHHHHhc-CCCCccee
Q 043278          420 FDFQTIAAAANNFSTTNKLGEGGFGPVYKGKL------ADEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKL-QHTNLVRL  491 (752)
Q Consensus       420 ~~~~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l  491 (752)
                      ++..+.....++|.+.+.||+|+||.||+|+.      .+++.||||++.... ......+.+|++++.++ +||||+++
T Consensus        12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            44555556678999999999999999999974      245789999997653 23446789999999999 88999999


Q ss_pred             eeeeeeCC-eeEEEEeeCCCCCHhHHHhhcCC------------------------------------------------
Q 043278          492 LGCSLHGE-ERLLVYEFMPNKSLDFFLFNSGR------------------------------------------------  522 (752)
Q Consensus       492 ~~~~~~~~-~~~lv~E~~~~gsL~~~l~~~~~------------------------------------------------  522 (752)
                      ++++.+.+ ..++||||+++|+|.+++.....                                                
T Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (359)
T 3vhe_A           92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK  171 (359)
T ss_dssp             EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred             eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence            99988755 48999999999999999976432                                                


Q ss_pred             ---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccccc
Q 043278          523 ---------------KNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNES  587 (752)
Q Consensus       523 ---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~  587 (752)
                                     ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.......
T Consensus       172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~  248 (359)
T 3vhe_A          172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD  248 (359)
T ss_dssp             ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred             ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence                           222899999999999999999999998   99999999999999999999999999987654433


Q ss_pred             ccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCC
Q 043278          588 EANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSL  666 (752)
Q Consensus       588 ~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  666 (752)
                      ........||+.|+|||++.+..++.++||||||+++|||++ |+.||.......      .....+..+.....     
T Consensus       249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~~~~~~-----  317 (359)
T 3vhe_A          249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTRMRA-----  317 (359)
T ss_dssp             CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHHTCCCCC-----
T ss_pred             chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH------HHHHHHHcCCCCCC-----
Confidence            333445678899999999999999999999999999999998 999997654321      11222222221111     


Q ss_pred             CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          667 EQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       667 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                          +......+.+++..|++.||.+|||+.||+++|+.+
T Consensus       318 ----~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  353 (359)
T 3vhe_A          318 ----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  353 (359)
T ss_dssp             ----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence                111223577889999999999999999999999864


No 37 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=5.4e-40  Score=353.46  Aligned_cols=263  Identities=26%  Similarity=0.402  Sum_probs=213.9

Q ss_pred             HHhcCCCcCCeeecCCcccEEEEEec------CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCC
Q 043278          427 AAANNFSTTNKLGEGGFGPVYKGKLA------DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGE  499 (752)
Q Consensus       427 ~~~~~~~~~~~LG~G~fg~Vy~~~~~------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  499 (752)
                      ...++|.+.+.||+|+||.||+|+..      +++.||||+++... ......+.+|+.++.+++||||+++++++.+++
T Consensus        44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  123 (343)
T 1luf_A           44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK  123 (343)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence            34678999999999999999999874      34789999997653 334567899999999999999999999999999


Q ss_pred             eeEEEEeeCCCCCHhHHHhhcCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCC
Q 043278          500 ERLLVYEFMPNKSLDFFLFNSGR---------------------KNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDL  558 (752)
Q Consensus       500 ~~~lv~E~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Di  558 (752)
                      ..++||||+++++|.+++.....                     ...+++..++.++.||+.||.|||+.+   |+||||
T Consensus       124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dl  200 (343)
T 1luf_A          124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDL  200 (343)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred             ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence            99999999999999999976421                     256899999999999999999999998   999999


Q ss_pred             CCCcEEecCCCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCC
Q 043278          559 KASNILLDDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRH  637 (752)
Q Consensus       559 kp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~  637 (752)
                      ||+|||++.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus       201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  280 (343)
T 1luf_A          201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM  280 (343)
T ss_dssp             SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence            99999999999999999999986644333233334567889999999999999999999999999999999 99998754


Q ss_pred             CCCCCcchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCC
Q 043278          638 HPDRPLNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETM  708 (752)
Q Consensus       638 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~  708 (752)
                      ..       ......+..+.....         +......+.+++.+||+.||.+|||+.||+++|+.+..
T Consensus       281 ~~-------~~~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          281 AH-------EEVIYYVRDGNILAC---------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             CH-------HHHHHHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             Ch-------HHHHHHHhCCCcCCC---------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence            31       112223333332211         11122457789999999999999999999999998754


No 38 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=2.1e-39  Score=345.35  Aligned_cols=271  Identities=20%  Similarity=0.255  Sum_probs=215.8

Q ss_pred             cCCCcCCeeecCCcccEEEEEecC-CceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCC--eeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLAD-EQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGE--ERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~  505 (752)
                      ++|.+.++||+|+||.||+|+... ++.||||++.... ......+.+|++++.+++||||+++++++....  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            578889999999999999998754 8899999997543 345677889999999999999999999987765  779999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEe----cCCCCceeccccccee
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILL----DDKMNPKISDFGMARI  581 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll----~~~~~~kl~DFgla~~  581 (752)
                      ||+++++|.+++........+++..++.++.||+.||+|||+.+   |+||||||+|||+    +.++.+||+|||+++.
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence            99999999999976555555999999999999999999999998   9999999999999    8888899999999987


Q ss_pred             ecccccccccccccccCCccChhhhc--------cCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHh
Q 043278          582 FEVNESEANTKRIVGTYGYMSPEYAM--------SGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLL  653 (752)
Q Consensus       582 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~  653 (752)
                      ......   .....||+.|+|||++.        +..++.++||||||+++|||++|+.||.........  .......+
T Consensus       166 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~  240 (319)
T 4euu_A          166 LEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN--KEVMYKII  240 (319)
T ss_dssp             CCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC--HHHHHHHH
T ss_pred             cCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh--HHHHHHHh
Confidence            653321   22356899999999986        578999999999999999999999999754432221  11112222


Q ss_pred             hCC---Cccccc-----------CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCC
Q 043278          654 SDG---KGLELI-----------DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETM  708 (752)
Q Consensus       654 ~~~---~~~~~~-----------d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~  708 (752)
                      ...   ....+.           +.......+......+.+++.+||+.||++|||++|+++..++...
T Consensus       241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~  309 (319)
T 4euu_A          241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (319)
T ss_dssp             HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred             cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence            111   100000           0011123456677788899999999999999999999999987644


No 39 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.2e-40  Score=364.04  Aligned_cols=261  Identities=25%  Similarity=0.364  Sum_probs=213.6

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec--------CCceeEEEEcccCC-cccHHHHHHHHHHHHhc-CCCCcceeeeeeeeC
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA--------DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHG  498 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  498 (752)
                      .++|.+.+.||+|+||.||+|+..        .+..||||++.... .....++.+|++++.++ +||||+++++++.++
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            467888999999999999999852        23579999997653 33456789999999999 999999999999999


Q ss_pred             CeeEEEEeeCCCCCHhHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEe
Q 043278          499 EERLLVYEFMPNKSLDFFLFNSGR-------------KNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILL  565 (752)
Q Consensus       499 ~~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll  565 (752)
                      +..++||||+++|+|.+++.....             ...+++..++.++.||+.||+|||+.+   |+||||||+||||
T Consensus       148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll  224 (382)
T 3tt0_A          148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV  224 (382)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEE
T ss_pred             CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEE
Confidence            999999999999999999976432             245999999999999999999999998   9999999999999


Q ss_pred             cCCCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 043278          566 DDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLN  644 (752)
Q Consensus       566 ~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~  644 (752)
                      +.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||++++||++ |+.||.....     
T Consensus       225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-----  299 (382)
T 3tt0_A          225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-----  299 (382)
T ss_dssp             CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred             cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----
Confidence            9999999999999987654433333444567889999999999999999999999999999999 9999865541     


Q ss_pred             hHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCC
Q 043278          645 LIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETM  708 (752)
Q Consensus       645 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~  708 (752)
                        ......+..+.....         +......+.+++.+||+.||.+|||+.||++.|+.+..
T Consensus       300 --~~~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  352 (382)
T 3tt0_A          300 --EELFKLLKEGHRMDK---------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  352 (382)
T ss_dssp             --HHHHHHHHTTCCCCC---------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --HHHHHHHHcCCCCCC---------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence              122233333322111         11122457789999999999999999999999988743


No 40 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=2.9e-40  Score=342.70  Aligned_cols=257  Identities=25%  Similarity=0.344  Sum_probs=211.1

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeC
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFM  508 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  508 (752)
                      .++|++.+.||+|+||.||+++..++..||+|++.... ....++.+|+.++.+++||||+++++++.+++..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            36788889999999999999999888899999997654 34567899999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccccc
Q 043278          509 PNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESE  588 (752)
Q Consensus       509 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~  588 (752)
                      ++++|.+++...  ...+++..++.++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++.........
T Consensus        86 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  160 (268)
T 3sxs_A           86 SNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV  160 (268)
T ss_dssp             TTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE
T ss_pred             CCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhhh
Confidence            999999998653  235899999999999999999999998   999999999999999999999999999876543222


Q ss_pred             cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCC
Q 043278          589 ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLE  667 (752)
Q Consensus       589 ~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  667 (752)
                      . .....+++.|+|||.+.+..++.++||||||++++||++ |+.||......       ........+..  ...+.  
T Consensus       161 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~~--~~~~~--  228 (268)
T 3sxs_A          161 S-SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-------EVVLKVSQGHR--LYRPH--  228 (268)
T ss_dssp             E-CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-------HHHHHHHTTCC--CCCCT--
T ss_pred             c-ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-------HHHHHHHcCCC--CCCCC--
Confidence            1 223456778999999999999999999999999999999 99998654421       11112222211  11111  


Q ss_pred             CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCC
Q 043278          668 QPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETM  708 (752)
Q Consensus       668 ~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~  708 (752)
                           .....+.+++.+|++.||.+|||+.|+++.|+.+..
T Consensus       229 -----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          229 -----LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             -----TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             -----cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence                 112357789999999999999999999999998743


No 41 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=2.5e-40  Score=351.43  Aligned_cols=259  Identities=29%  Similarity=0.434  Sum_probs=212.2

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe------cCCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL------ADEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEER  501 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  501 (752)
                      .++|.+.+.||+|+||.||++..      .+++.||||++.... .....++.+|+.++.+++||||+++++++.+.+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            46788889999999999999985      235789999997643 33456789999999999999999999999999999


Q ss_pred             EEEEeeCCCCCHhHHHhhcCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCC
Q 043278          502 LLVYEFMPNKSLDFFLFNSGR---------------------KNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKA  560 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp  560 (752)
                      ++||||+++++|.+++.....                     ...+++..++.++.||+.||+|||+++   |+||||||
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp  178 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAA  178 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccch
Confidence            999999999999999976432                     234899999999999999999999998   99999999


Q ss_pred             CcEEecCCCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCC
Q 043278          561 SNILLDDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHP  639 (752)
Q Consensus       561 ~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~  639 (752)
                      +|||++.++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus       179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  258 (314)
T 2ivs_A          179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP  258 (314)
T ss_dssp             GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            999999999999999999987654443333344567889999999999999999999999999999999 9999976543


Q ss_pred             CCCcchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          640 DRPLNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       640 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      ..   +    ...+..+.....         +......+.+++.+|++.||.+|||+.|+++.|+.+
T Consensus       259 ~~---~----~~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~  309 (314)
T 2ivs_A          259 ER---L----FNLLKTGHRMER---------PDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM  309 (314)
T ss_dssp             GG---H----HHHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HH---H----HHHhhcCCcCCC---------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            21   1    122222221111         112234577899999999999999999999999865


No 42 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=5.8e-40  Score=352.70  Aligned_cols=250  Identities=21%  Similarity=0.336  Sum_probs=196.6

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      .++|.+.+.||+|+||+||+|+. .+++.||||++.... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus         9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E   88 (347)
T 3zgw_A            9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE   88 (347)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence            46888999999999999999986 568999999987653 2334568899999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNE  586 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~  586 (752)
                      |+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||++.......
T Consensus        89 ~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~  162 (347)
T 3zgw_A           89 YCPGGELFDYIISQ---DRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK  162 (347)
T ss_dssp             CCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred             CCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence            99999999998653   34899999999999999999999998   9999999999999999999999999987654322


Q ss_pred             cccccccccccCCccChhhhccCCC-CccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCC
Q 043278          587 SEANTKRIVGTYGYMSPEYAMSGIV-SIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPS  665 (752)
Q Consensus       587 ~~~~~~~~~gt~~y~aPE~~~~~~~-t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  665 (752)
                      . .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....      .... ..+..+...      
T Consensus       163 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~------~~~~-~~i~~~~~~------  228 (347)
T 3zgw_A          163 D-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV------MALY-KKIMRGKYD------  228 (347)
T ss_dssp             ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHH-HHHHHTCCC------
T ss_pred             C-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH------HHHH-HHHHcCCCC------
Confidence            1 12234678999999999988775 8999999999999999999999975431      1111 222222110      


Q ss_pred             CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          666 LEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       666 l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      +...    ....+.+++.+||+.||.+|||++|+++.
T Consensus       229 ~p~~----~s~~~~~li~~~L~~dP~~Rps~~eil~h  261 (347)
T 3zgw_A          229 VPKW----LSPSSILLLQQMLQVDPKKRISMKNLLNH  261 (347)
T ss_dssp             CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             CCCC----CCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence            1111    12346678999999999999999999875


No 43 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=4.4e-40  Score=351.13  Aligned_cols=253  Identities=23%  Similarity=0.351  Sum_probs=203.6

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc-ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEee
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG-QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEF  507 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  507 (752)
                      ++|++.+.||+|+||.||+++.. +++.||||++..... ...+.+.+|+.++.+++||||+++++++.+++..++||||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            57888999999999999999875 688999999865432 2345688999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccccc
Q 043278          508 MPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNES  587 (752)
Q Consensus       508 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~  587 (752)
                      +++++|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+.....
T Consensus        87 ~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  160 (323)
T 3tki_A           87 CSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR  160 (323)
T ss_dssp             CTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred             CCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence            999999998843   345999999999999999999999998   99999999999999999999999999987654443


Q ss_pred             ccccccccccCCccChhhhccCCC-CccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCC
Q 043278          588 EANTKRIVGTYGYMSPEYAMSGIV-SIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSL  666 (752)
Q Consensus       588 ~~~~~~~~gt~~y~aPE~~~~~~~-t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  666 (752)
                      ........||+.|+|||++.+..+ +.++||||||+++|||++|+.||.........      ...+.....  ...+  
T Consensus       161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~------~~~~~~~~~--~~~~--  230 (323)
T 3tki_A          161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE------YSDWKEKKT--YLNP--  230 (323)
T ss_dssp             ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHH------HHHHHTTCT--TSTT--
T ss_pred             ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHH------HHHHhcccc--cCCc--
Confidence            333445789999999999988775 78999999999999999999999765432111      111111110  0010  


Q ss_pred             CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          667 EQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       667 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                          .......+.+++.+||+.||.+|||+.|+++.
T Consensus       231 ----~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          231 ----WKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             ----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ----cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence                11122456788999999999999999999876


No 44 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=1.2e-39  Score=343.99  Aligned_cols=261  Identities=22%  Similarity=0.327  Sum_probs=203.8

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHh--cCCCCcceeeeeeee----CCeeE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAK--LQHTNLVRLLGCSLH----GEERL  502 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~~  502 (752)
                      .++|.+.+.||+|+||+||+|+. +++.||||++...   ....+..|.+++..  ++||||+++++++..    ....+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            46888999999999999999988 6889999998653   34556677777776  799999999998654    34578


Q ss_pred             EEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCcEeecCCCCCcEEecCCCCceec
Q 043278          503 LVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLH--------KYSRLRVIHRDLKASNILLDDKMNPKIS  574 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~iiH~Dikp~NIll~~~~~~kl~  574 (752)
                      +||||+++|+|.+++.    ...+++..++.++.||+.||+|||        +.+   |+||||||+|||++.++.+||+
T Consensus        83 lv~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~  155 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIA  155 (301)
T ss_dssp             EEECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEEC
T ss_pred             EehhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEe
Confidence            9999999999999993    345999999999999999999999        655   9999999999999999999999


Q ss_pred             ccccceeecccccc--cccccccccCCccChhhhccC------CCCccchhHHHHHHHHHHHhC----------CCCCCC
Q 043278          575 DFGMARIFEVNESE--ANTKRIVGTYGYMSPEYAMSG------IVSIKTDVFSFGVLVLEIVSG----------QKNHTR  636 (752)
Q Consensus       575 DFgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~t~k~DV~S~G~vl~elltG----------~~p~~~  636 (752)
                      |||+++........  .......||+.|+|||.+.+.      .++.++||||||+++|||++|          +.||..
T Consensus       156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~  235 (301)
T 3q4u_A          156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD  235 (301)
T ss_dssp             CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence            99999876543222  112335789999999999876      456799999999999999999          777765


Q ss_pred             CCCCCCcchHHHHHHHhhCCCcccccCCCCC-CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          637 HHPDRPLNLIGYAWQLLSDGKGLELIDPSLE-QPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       637 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      ........  ............    .+.+. ...+......+.+++.+||+.||++|||+.||++.|+.+
T Consensus       236 ~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          236 VVPNDPSF--EDMRKVVCVDQQ----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             TSCSSCCH--HHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCCcch--hhhhHHHhccCC----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            54333221  111222211111    11111 112334667888999999999999999999999999864


No 45 
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=2.3e-40  Score=369.72  Aligned_cols=263  Identities=28%  Similarity=0.431  Sum_probs=207.8

Q ss_pred             cCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeCC
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFMP  509 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  509 (752)
                      ++|.+.++||+|+||.||+|...++..||||+++... ...++|.+|+.++.+++||||+++++++.+ +..++||||++
T Consensus       184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~  261 (452)
T 1fmk_A          184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS  261 (452)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred             hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence            5677789999999999999999888889999997654 346789999999999999999999999876 67899999999


Q ss_pred             CCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccccccc
Q 043278          510 NKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESEA  589 (752)
Q Consensus       510 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~~  589 (752)
                      +|+|.+++... ....+++..++.++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++....... .
T Consensus       262 ~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~  336 (452)
T 1fmk_A          262 KGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-T  336 (452)
T ss_dssp             TCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred             CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCce-e
Confidence            99999999542 1235899999999999999999999998   99999999999999999999999999987643221 1


Q ss_pred             ccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCC
Q 043278          590 NTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQ  668 (752)
Q Consensus       590 ~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  668 (752)
                      ......++..|+|||.+....++.++||||||+++|||++ |+.||......       .....+..+....        
T Consensus       337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-------~~~~~i~~~~~~~--------  401 (452)
T 1fmk_A          337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-------EVLDQVERGYRMP--------  401 (452)
T ss_dssp             ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTTCCCC--------
T ss_pred             cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCCCC--------
Confidence            1223456788999999999999999999999999999999 89998754321       1122222222111        


Q ss_pred             CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCCCCCCCCC
Q 043278          669 PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETMPLPPPKQ  715 (752)
Q Consensus       669 ~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~~~~p~~  715 (752)
                       .+......+.+++.+||+.||++|||++++++.|+......+++.+
T Consensus       402 -~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~~~  447 (452)
T 1fmk_A          402 -CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQ  447 (452)
T ss_dssp             -CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCC
T ss_pred             -CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcccc
Confidence             1122234577899999999999999999999999987654444433


No 46 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.6e-41  Score=357.58  Aligned_cols=264  Identities=23%  Similarity=0.382  Sum_probs=205.5

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-----cCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeC--Cee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-----ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG--EER  501 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  501 (752)
                      .++|++.++||+|+||+||++++     .+++.||||++..........+.+|+.++.+++||||+++++++...  ...
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            36788889999999999999984     35789999999877666677899999999999999999999998653  458


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                      ++||||+++++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus        89 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~  163 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKV  163 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred             EEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCccccc
Confidence            9999999999999999654  234899999999999999999999988   99999999999999999999999999987


Q ss_pred             ecccccc-cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCC---------CCCcchHHHHHH
Q 043278          582 FEVNESE-ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHP---------DRPLNLIGYAWQ  651 (752)
Q Consensus       582 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~---------~~~~~l~~~~~~  651 (752)
                      ....... .......++..|+|||.+.+..++.++||||||+++|||++|..|+.....         ............
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (295)
T 3ugc_A          164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE  243 (295)
T ss_dssp             ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred             ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence            6543221 122234567789999999999999999999999999999999988754321         000111111122


Q ss_pred             HhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          652 LLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       652 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      .+..+...         +.+......+.+++.+||+.||++|||+.|+++.|+.+
T Consensus       244 ~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l  289 (295)
T 3ugc_A          244 LLKNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI  289 (295)
T ss_dssp             HHHTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHhccCcC---------CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            22222111         11222234677899999999999999999999999875


No 47 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=1.9e-40  Score=370.81  Aligned_cols=257  Identities=28%  Similarity=0.416  Sum_probs=209.5

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeC
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFM  508 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  508 (752)
                      .++|.+.+.||+|+||.||+|...++..||||+++... ...++|.+|+.++.+++||||+++++++. .+..++||||+
T Consensus       187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~  264 (454)
T 1qcf_A          187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM  264 (454)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred             hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence            35677889999999999999999888999999997654 45778999999999999999999999986 56789999999


Q ss_pred             CCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccccc
Q 043278          509 PNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESE  588 (752)
Q Consensus       509 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~  588 (752)
                      ++|+|.+++.... ...+++..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++........
T Consensus       265 ~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~  340 (454)
T 1qcf_A          265 AKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT  340 (454)
T ss_dssp             TTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred             CCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence            9999999996432 234789999999999999999999998   999999999999999999999999999865432211


Q ss_pred             cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCC
Q 043278          589 ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLE  667 (752)
Q Consensus       589 ~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  667 (752)
                       ......++..|+|||++....++.++||||||++||||++ |+.||......       .....+..+....       
T Consensus       341 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-------~~~~~i~~~~~~~-------  405 (454)
T 1qcf_A          341 -AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-------EVIRALERGYRMP-------  405 (454)
T ss_dssp             -TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-------HHHHHHHHTCCCC-------
T ss_pred             -ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCCCC-------
Confidence             1223446788999999999999999999999999999999 99999754321       1112222221111       


Q ss_pred             CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCC
Q 043278          668 QPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETM  708 (752)
Q Consensus       668 ~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~  708 (752)
                        .+......+.+++.+||+.||++|||+.+|++.|+....
T Consensus       406 --~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          406 --RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             --CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             --CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence              111223457789999999999999999999999998754


No 48 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=1.7e-39  Score=344.15  Aligned_cols=264  Identities=25%  Similarity=0.421  Sum_probs=203.3

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      .++|.+.++||+|+||.||+|+...  .+|+|.++...  ......+.+|+.++.+++||||+++++++. .+..++|||
T Consensus        35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e  111 (307)
T 3lb7_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ  111 (307)
T ss_dssp             TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred             ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence            3688899999999999999998643  58999887543  334567899999999999999999999875 456889999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNE  586 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~  586 (752)
                      |+++++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++......
T Consensus       112 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~  186 (307)
T 3lb7_A          112 WCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS  186 (307)
T ss_dssp             CCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC-----
T ss_pred             cCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceeccccc
Confidence            99999999998643  345899999999999999999999998   9999999999999999999999999998654333


Q ss_pred             cccccccccccCCccChhhhc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccC
Q 043278          587 SEANTKRIVGTYGYMSPEYAM---SGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELID  663 (752)
Q Consensus       587 ~~~~~~~~~gt~~y~aPE~~~---~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  663 (752)
                      .........||+.|+|||.+.   +..++.++||||||+++|||++|+.||.......      ........+.....+.
T Consensus       187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~------~~~~~~~~~~~~~~~~  260 (307)
T 3lb7_A          187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD------QIIFMVGRGYASPDLS  260 (307)
T ss_dssp             -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH------HHHHHHHHTCCCCCST
T ss_pred             ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH------HHHHHHhcCCCCcchh
Confidence            333334467899999999986   6678999999999999999999999997654221      1111111111111000


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCCCCC
Q 043278          664 PSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETMPLP  711 (752)
Q Consensus       664 ~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~~~  711 (752)
                       .+...    ....+.+++.+|++.+|++|||+.|+++.|+.+....|
T Consensus       261 -~~~~~----~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p  303 (307)
T 3lb7_A          261 -KLYKN----CPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             -TSCSS----SCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             -hhhcC----CcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence             11111    22457789999999999999999999999988755443


No 49 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=4.8e-40  Score=371.14  Aligned_cols=256  Identities=26%  Similarity=0.399  Sum_probs=211.4

Q ss_pred             cCCCcCCeeecCCcccEEEEEecC-CceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeC
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLAD-EQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFM  508 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  508 (752)
                      ++|.+.++||+|+||.||+|+... +..||||+++... ...++|.+|+.++.+++||||++++++|.+.+..+|||||+
T Consensus       220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~  298 (495)
T 1opk_A          220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM  298 (495)
T ss_dssp             GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence            567788999999999999999865 7889999997653 35678999999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccccc
Q 043278          509 PNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESE  588 (752)
Q Consensus       509 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~  588 (752)
                      ++|+|.+++.... ...+++..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++....... 
T Consensus       299 ~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-  373 (495)
T 1opk_A          299 TYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY-  373 (495)
T ss_dssp             TTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE-
T ss_pred             CCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCce-
Confidence            9999999997543 345899999999999999999999998   99999999999999999999999999987643321 


Q ss_pred             cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCC
Q 043278          589 ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLE  667 (752)
Q Consensus       589 ~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  667 (752)
                      .......++..|+|||.+....++.++||||||++||||++ |+.||.......   .    .+.+..+...        
T Consensus       374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~----~~~~~~~~~~--------  438 (495)
T 1opk_A          374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---V----YELLEKDYRM--------  438 (495)
T ss_dssp             ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---H----HHHHHTTCCC--------
T ss_pred             eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---H----HHHHHcCCCC--------
Confidence            11223456788999999999999999999999999999999 999987654221   1    1222222111        


Q ss_pred             CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCC
Q 043278          668 QPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNET  707 (752)
Q Consensus       668 ~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~  707 (752)
                       ..+......+.+|+.+||+.||.+|||+.||++.|+.+.
T Consensus       439 -~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          439 -ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             -CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence             111222345778999999999999999999999999864


No 50 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=2.3e-40  Score=353.39  Aligned_cols=261  Identities=25%  Similarity=0.408  Sum_probs=194.4

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEecCCc----eeEEEEcccC--CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCee
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLADEQ----EVAIKRLSRS--SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEER  501 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~----~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  501 (752)
                      ..++|++.+.||+|+||.||+|+.....    .||||++...  .....+++.+|+.++++++||||+++++++......
T Consensus        21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  100 (323)
T 3qup_A           21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK  100 (323)
T ss_dssp             C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred             ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence            3468999999999999999999875432    7999999765  334567899999999999999999999999877655


Q ss_pred             ------EEEEeeCCCCCHhHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCce
Q 043278          502 ------LLVYEFMPNKSLDFFLFNSG---RKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPK  572 (752)
Q Consensus       502 ------~lv~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~k  572 (752)
                            ++||||+++|+|.+++....   ....+++..++.++.||+.||+|||+.+   |+||||||+|||+++++.+|
T Consensus       101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~k  177 (323)
T 3qup_A          101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVC  177 (323)
T ss_dssp             ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEE
T ss_pred             cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEE
Confidence                  99999999999999986532   2225899999999999999999999998   99999999999999999999


Q ss_pred             ecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHH
Q 043278          573 ISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQ  651 (752)
Q Consensus       573 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~  651 (752)
                      |+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......   .    ..
T Consensus       178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~----~~  250 (323)
T 3qup_A          178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---I----YN  250 (323)
T ss_dssp             ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---H----HH
T ss_pred             EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---H----HH
Confidence            999999987654433333334556788999999999999999999999999999999 899987654321   1    11


Q ss_pred             HhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCC
Q 043278          652 LLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNET  707 (752)
Q Consensus       652 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~  707 (752)
                      .+..+....         .+......+.+++.+|++.||.+|||+.|+++.|+.+.
T Consensus       251 ~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l  297 (323)
T 3qup_A          251 YLIGGNRLK---------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL  297 (323)
T ss_dssp             HHHTTCCCC---------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHhcCCCCC---------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            122221111         11122245778999999999999999999999998763


No 51 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=2.9e-39  Score=346.00  Aligned_cols=260  Identities=20%  Similarity=0.232  Sum_probs=208.1

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCeeEEEEe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      .++|.+.+.||+|+||.||+|+. .+++.||||++.....  ..++.+|+.++.++ +|+||+++++++..++..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            36788899999999999999986 5688999999875432  23578999999999 99999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCC-----ceeccccccee
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMN-----PKISDFGMARI  581 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~-----~kl~DFgla~~  581 (752)
                      |+ +++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.     +||+|||+++.
T Consensus        86 ~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~  159 (330)
T 2izr_A           86 LL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE  159 (330)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred             eC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence            99 99999998654  346999999999999999999999998   999999999999998887     99999999987


Q ss_pred             eccccccc-----ccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCC
Q 043278          582 FEVNESEA-----NTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDG  656 (752)
Q Consensus       582 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  656 (752)
                      ........     ......||+.|+|||++.+..++.++||||||+++|||++|+.||......................
T Consensus       160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~  239 (330)
T 2izr_A          160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT  239 (330)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred             eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence            64432211     1235689999999999999999999999999999999999999998765433222221111111000


Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          657 KGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       657 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      . .+.    +...     ...+.+++..|++.||.+||++.+|++.|+.+
T Consensus       240 ~-~~~----~~~~-----~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~  279 (330)
T 2izr_A          240 P-IEV----LCEN-----FPEMATYLRYVRRLDFFEKPDYDYLRKLFTDL  279 (330)
T ss_dssp             C-HHH----HTTT-----CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             C-HHH----Hhcc-----ChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence            0 000    0000     11678899999999999999999999998754


No 52 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=1.1e-39  Score=346.24  Aligned_cols=263  Identities=24%  Similarity=0.317  Sum_probs=202.5

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCc--ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSG--QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      .++|.+.++||+|+||+||+++..+++.||+|++.....  .....+.+|+.++++++||||+++++++.+++..++|||
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            367888999999999999999998899999999875432  234678899999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNE  586 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~  586 (752)
                      |+++ +|.+++...  ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......
T Consensus       100 ~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  173 (311)
T 3niz_A          100 FMEK-DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPV  173 (311)
T ss_dssp             CCSE-EHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred             CCCC-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence            9985 777777543  345899999999999999999999998   9999999999999999999999999998754322


Q ss_pred             cccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCccc---cc
Q 043278          587 SEANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLE---LI  662 (752)
Q Consensus       587 ~~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~  662 (752)
                      .  ......+|+.|+|||++.+ ..++.++||||||+++|||++|+.||.........   ......+.......   ..
T Consensus       174 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~~~  248 (311)
T 3niz_A          174 R--SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL---PKIFSILGTPNPREWPQVQ  248 (311)
T ss_dssp             C-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHH---HHHHHHHCCCCTTTSGGGT
T ss_pred             c--cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHHCCCChHHhhhhh
Confidence            1  1223568999999999876 56899999999999999999999999876544322   22222221111000   00


Q ss_pred             ------CCC--CCCCCCH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          663 ------DPS--LEQPCSA-----NEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       663 ------d~~--l~~~~~~-----~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                            +..  .....+.     .....+.+++.+|++.||++|||++|++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH  301 (311)
T ss_dssp             TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                  000  0000011     112457789999999999999999999874


No 53 
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=2.2e-40  Score=354.02  Aligned_cols=256  Identities=25%  Similarity=0.370  Sum_probs=202.5

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCce----eEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQE----VAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~----vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  503 (752)
                      ++|.+.+.||+|+||.||+|+.. +++.    ||+|.+.... ......+.+|+.++.+++||||+++++++. ++..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            57788899999999999999864 4444    7888775442 233456788999999999999999999986 566889


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      ||||+++|+|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        92 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  166 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP  166 (325)
T ss_dssp             EEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred             EEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccC
Confidence            99999999999998643  346899999999999999999999998   9999999999999999999999999998765


Q ss_pred             ccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCccccc
Q 043278          584 VNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  662 (752)
                      ............++..|+|||.+.+..++.++||||||+++|||++ |+.||.......       ....+..+..... 
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~~~~-  238 (325)
T 3kex_A          167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE-------VPDLLEKGERLAQ-  238 (325)
T ss_dssp             CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH-------HHHHHHTTCBCCC-
T ss_pred             cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH-------HHHHHHcCCCCCC-
Confidence            4443333445677889999999999999999999999999999999 999997654321       1122222221111 


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCC
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNET  707 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~  707 (752)
                       +..       ....+.+++.+||+.||.+|||+.|++++|+.+.
T Consensus       239 -~~~-------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~  275 (325)
T 3kex_A          239 -PQI-------CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA  275 (325)
T ss_dssp             -CTT-------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred             -CCc-------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence             110       1123567889999999999999999999998764


No 54 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.6e-40  Score=355.10  Aligned_cols=263  Identities=26%  Similarity=0.401  Sum_probs=210.9

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEe------cCCceeEEEEcccCC-cccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCC
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKL------ADEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGE  499 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~------~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  499 (752)
                      ..++|.+.+.||+|+||.||+|+.      ..+..||||++.... ......+.+|+.++.++ +||||+++++++...+
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            357889999999999999999986      235679999997542 33456789999999999 8999999999999999


Q ss_pred             eeEEEEeeCCCCCHhHHHhhcCCC--------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCC
Q 043278          500 ERLLVYEFMPNKSLDFFLFNSGRK--------------------NVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLK  559 (752)
Q Consensus       500 ~~~lv~E~~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dik  559 (752)
                      ..++||||+++|+|.+++......                    ..+++..++.++.||+.||+|||+.+   |+|||||
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dik  199 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLA  199 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCS
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCC
Confidence            999999999999999999754321                    34899999999999999999999998   9999999


Q ss_pred             CCcEEecCCCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCC
Q 043278          560 ASNILLDDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHH  638 (752)
Q Consensus       560 p~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~  638 (752)
                      |+|||++.++.+||+|||++................+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            9999999999999999999987654433333344567889999999999999999999999999999998 999997654


Q ss_pred             CCCCcchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCC
Q 043278          639 PDRPLNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETM  708 (752)
Q Consensus       639 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~  708 (752)
                      ...      .....+..+....         .+......+.+++.+||+.||.+|||+.|++++|+....
T Consensus       280 ~~~------~~~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          280 VDA------NFYKLIQNGFKMD---------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             CSH------HHHHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             cHH------HHHHHHhcCCCCC---------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            321      1122222221111         111123457789999999999999999999999988654


No 55 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=6.8e-40  Score=340.46  Aligned_cols=253  Identities=28%  Similarity=0.415  Sum_probs=196.0

Q ss_pred             cCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCc----ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSG----QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ++|+..+.||+|+||.||+|... ++.||||++.....    ...+.+.+|++++.+++||||+++++++.+++..++||
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            57888899999999999999974 78899999875432    33567899999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC--------CCCceecccc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD--------KMNPKISDFG  577 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~--------~~~~kl~DFg  577 (752)
                      ||+++++|.+++.    ...+++..+..++.|++.||+|||+++..+|+||||||+|||++.        ++.+||+|||
T Consensus        86 e~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg  161 (271)
T 3dtc_A           86 EFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG  161 (271)
T ss_dssp             ECCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred             EcCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence            9999999999883    346899999999999999999999987666999999999999986        7789999999


Q ss_pred             cceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCC
Q 043278          578 MARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGK  657 (752)
Q Consensus       578 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  657 (752)
                      +++......    .....|++.|+|||.+.+..++.++||||||++++||++|+.||......      ...........
T Consensus       162 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~  231 (271)
T 3dtc_A          162 LAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL------AVAYGVAMNKL  231 (271)
T ss_dssp             C-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH------HHHHHHHTSCC
T ss_pred             ccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHhhhcCCC
Confidence            998654322    12356899999999999999999999999999999999999999754311      11111111111


Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          658 GLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       658 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      ..     .    .+......+.+++.+|++.||.+|||+.|++++|+.+
T Consensus       232 ~~-----~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          232 AL-----P----IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             CC-----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             CC-----C----CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            11     1    1112234577899999999999999999999999853


No 56 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=5.1e-40  Score=343.75  Aligned_cols=255  Identities=26%  Similarity=0.404  Sum_probs=206.7

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeC
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFM  508 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  508 (752)
                      .++|.+.+.||+|+||.||+++..++..||+|++.... ....++.+|++++.+++|+||+++++++.+++..++||||+
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            46788889999999999999999888899999997653 34577899999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccccc
Q 043278          509 PNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESE  588 (752)
Q Consensus       509 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~  588 (752)
                      ++++|.+++...  ...+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++....... 
T Consensus       102 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~-  175 (283)
T 3gen_A          102 ANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-  175 (283)
T ss_dssp             TTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH-
T ss_pred             CCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEcccccccccccccc-
Confidence            999999999653  345999999999999999999999998   99999999999999999999999999986543221 


Q ss_pred             cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCC
Q 043278          589 ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLE  667 (752)
Q Consensus       589 ~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  667 (752)
                      .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......       .....+..+...  ..+   
T Consensus       176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-------~~~~~~~~~~~~--~~~---  243 (283)
T 3gen_A          176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-------ETAEHIAQGLRL--YRP---  243 (283)
T ss_dssp             HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-------HHHHHHHTTCCC--CCC---
T ss_pred             ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-------HHHHHHhcccCC--CCC---
Confidence            11223456788999999999999999999999999999998 99998765421       111222222111  111   


Q ss_pred             CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          668 QPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       668 ~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                          ......+.+++.+||+.||.+|||+.|+++.|+.+
T Consensus       244 ----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~  278 (283)
T 3gen_A          244 ----HLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  278 (283)
T ss_dssp             ----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence                11124577899999999999999999999999764


No 57 
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=4.8e-39  Score=340.64  Aligned_cols=262  Identities=27%  Similarity=0.388  Sum_probs=201.9

Q ss_pred             cCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeCC
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFMP  509 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  509 (752)
                      ++|++.+.||+|+||.||+++.. ++.||||++...  .....+.+|++++.+++||||+++++++.+  ..++||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence            56778899999999999999874 688999999653  345678999999999999999999998873  4799999999


Q ss_pred             CCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCC-ceecccccceeecccccc
Q 043278          510 NKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMN-PKISDFGMARIFEVNESE  588 (752)
Q Consensus       510 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~-~kl~DFgla~~~~~~~~~  588 (752)
                      +++|.+++........+++..++.++.||++||+|||+.+..+|+||||||+|||++.++. +||+|||++......   
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---  159 (307)
T 2eva_A           83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---  159 (307)
T ss_dssp             TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred             CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence            9999999976554456889999999999999999999943334999999999999998887 799999999754322   


Q ss_pred             cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCC
Q 043278          589 ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQ  668 (752)
Q Consensus       589 ~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  668 (752)
                        .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......    .....+. ...+.....     ..
T Consensus       160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~-~~~~~~~~~-----~~  227 (307)
T 2eva_A          160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP----AFRIMWA-VHNGTRPPL-----IK  227 (307)
T ss_dssp             -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS----HHHHHHH-HHTTCCCCC-----BT
T ss_pred             --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc----HHHHHHH-HhcCCCCCc-----cc
Confidence              12346899999999999999999999999999999999999999754321    1111111 122221111     11


Q ss_pred             CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCCCCCCCCC
Q 043278          669 PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETMPLPPPKQ  715 (752)
Q Consensus       669 ~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~~~~p~~  715 (752)
                      ..    ...+.+++.+|++.||.+|||+.|++++|+.+....+.+..
T Consensus       228 ~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~  270 (307)
T 2eva_A          228 NL----PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE  270 (307)
T ss_dssp             TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTS
T ss_pred             cc----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCC
Confidence            12    23567899999999999999999999999876443443333


No 58 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=1.3e-39  Score=342.80  Aligned_cols=261  Identities=24%  Similarity=0.377  Sum_probs=205.9

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc---ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG---QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      .++|++.+.||+|+||.||+++.. .++.||+|++.....   .....+.+|+.++.+++||||+++++++.+++..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            357888999999999999999864 588999999865432   3346789999999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||+++++|.+++...   ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus        90 ~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  163 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSE  163 (294)
T ss_dssp             EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred             EeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence            9999999999998653   35899999999999999999999998   99999999999999999999999999986543


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      ... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.....      ............ ... ..
T Consensus       164 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~-~~~-~~  234 (294)
T 4eqm_A          164 TSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA------VSIAIKHIQDSV-PNV-TT  234 (294)
T ss_dssp             ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH------HHHHHHHHSSCC-CCH-HH
T ss_pred             ccc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhhccC-CCc-ch
Confidence            221 223346789999999999999999999999999999999999999976541      111222222211 110 00


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHhhcCCC
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRP-TMPEVVCMLQNETM  708 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RP-t~~ev~~~L~~~~~  708 (752)
                      ..    .......+.+++.+|++.||.+|| +++++.+.|+....
T Consensus       235 ~~----~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~  275 (294)
T 4eqm_A          235 DV----RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH  275 (294)
T ss_dssp             HS----CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred             hc----ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence            01    111234577899999999999999 99999999987643


No 59 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=4e-39  Score=345.06  Aligned_cols=248  Identities=23%  Similarity=0.270  Sum_probs=204.4

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccC---CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRS---SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ++|++.+.||+|+||.||+++.. +++.||+|++++.   .......+.+|+.++.+++||||+++++++...+..++||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            57888999999999999999875 5889999999754   2345667899999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      ||+++|+|..++...   ..+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.....
T Consensus        85 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  158 (337)
T 1o6l_A           85 EYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             ECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred             eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence            999999999988643   35899999999999999999999998   999999999999999999999999999853322


Q ss_pred             ccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCC
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPS  665 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  665 (752)
                      .  .......||+.|+|||++.+..++.++||||||+++|||++|+.||......      ........ +..      .
T Consensus       159 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~-~~~------~  223 (337)
T 1o6l_A          159 G--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------RLFELILM-EEI------R  223 (337)
T ss_dssp             T--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHH-CCC------C
T ss_pred             C--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH------HHHHHHHc-CCC------C
Confidence            1  2233568999999999999999999999999999999999999999754311      11111221 111      1


Q ss_pred             CCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 043278          666 LEQPCSANEVMRCIHVGLLCVQDQAMDRP-----TMPEVVCM  702 (752)
Q Consensus       666 l~~~~~~~~~~~l~~l~~~Cl~~dp~~RP-----t~~ev~~~  702 (752)
                      +    +......+.+++.+||+.||.+||     +++|++++
T Consensus       224 ~----p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          224 F----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             C----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             C----CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence            1    111223567889999999999999     89999875


No 60 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=2e-39  Score=361.92  Aligned_cols=249  Identities=26%  Similarity=0.382  Sum_probs=204.6

Q ss_pred             cCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCC-eeEEEEeeC
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGE-ERLLVYEFM  508 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~E~~  508 (752)
                      ++|.+.+.||+|+||.||+|... ++.||||+++...  ...+|.+|+.++.+++||||+++++++.+.+ ..++||||+
T Consensus       193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~  269 (450)
T 1k9a_A          193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM  269 (450)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred             HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence            56778899999999999999985 6799999997653  4567999999999999999999999987765 789999999


Q ss_pred             CCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccccc
Q 043278          509 PNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESE  588 (752)
Q Consensus       509 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~  588 (752)
                      ++|+|.+++.... ...+++..++.++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.....   
T Consensus       270 ~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---  342 (450)
T 1k9a_A          270 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---  342 (450)
T ss_dssp             TTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence            9999999997643 345799999999999999999999998   999999999999999999999999999854321   


Q ss_pred             cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCC
Q 043278          589 ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLE  667 (752)
Q Consensus       589 ~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  667 (752)
                        .....++..|+|||.+.+..++.++||||||+++|||++ |+.||.......   .    ...+..+....       
T Consensus       343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~----~~~i~~~~~~~-------  406 (450)
T 1k9a_A          343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---V----VPRVEKGYKMD-------  406 (450)
T ss_dssp             ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---H----HHHHHTTCCCC-------
T ss_pred             --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---H----HHHHHcCCCCC-------
Confidence              112356789999999999999999999999999999999 999997655332   1    12222222111       


Q ss_pred             CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          668 QPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       668 ~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                        .+......+.+++.+||+.||.+|||+.|+++.|+.+
T Consensus       407 --~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i  443 (450)
T 1k9a_A          407 --APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI  443 (450)
T ss_dssp             --CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence              1112234577899999999999999999999999864


No 61 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=6.6e-40  Score=347.98  Aligned_cols=260  Identities=25%  Similarity=0.401  Sum_probs=211.4

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe------cCCceeEEEEcccCCc-ccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL------ADEQEVAIKRLSRSSG-QGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEE  500 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  500 (752)
                      .++|.+.+.||+|+||.||+|+.      .+++.||||++..... .....+.+|+.++.++ +||||+++++++.+++.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            36788899999999999999985      3467899999976533 3456789999999999 99999999999999999


Q ss_pred             eEEEEeeCCCCCHhHHHhhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEe
Q 043278          501 RLLVYEFMPNKSLDFFLFNSGR---------------KNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILL  565 (752)
Q Consensus       501 ~~lv~E~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll  565 (752)
                      .++||||+++|+|.+++.....               ...+++..++.++.||+.||+|||+.+   |+||||||+|||+
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~  178 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL  178 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEE
Confidence            9999999999999999976432               224899999999999999999999998   9999999999999


Q ss_pred             cCCCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 043278          566 DDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLN  644 (752)
Q Consensus       566 ~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~  644 (752)
                      +.++.+||+|||+++...............+++.|+|||.+.+..++.++||||||++++||++ |+.||.......   
T Consensus       179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---  255 (313)
T 1t46_A          179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS---  255 (313)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH---
T ss_pred             cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh---
Confidence            9999999999999987654433333344567889999999999999999999999999999999 999987654321   


Q ss_pred             hHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          645 LIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       645 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                         ........+...     .    .+......+.+++.+|++.||.+|||+.|++++|+..
T Consensus       256 ---~~~~~~~~~~~~-----~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  305 (313)
T 1t46_A          256 ---KFYKMIKEGFRM-----L----SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (313)
T ss_dssp             ---HHHHHHHHTCCC-----C----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---HHHHHhccCCCC-----C----CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence               111122211110     0    0111224577899999999999999999999999865


No 62 
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=9.9e-40  Score=348.25  Aligned_cols=264  Identities=26%  Similarity=0.417  Sum_probs=213.1

Q ss_pred             HHHhcCCCcCCeeecCCcccEEEEEec------CCceeEEEEcccCCc-ccHHHHHHHHHHHHhcCCCCcceeeeeeeeC
Q 043278          426 AAAANNFSTTNKLGEGGFGPVYKGKLA------DEQEVAIKRLSRSSG-QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG  498 (752)
Q Consensus       426 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~------~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  498 (752)
                      ....++|.+.+.||+|+||.||+|+..      .++.||||.+..... ....++.+|+.++.+++|+||+++++++.++
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  100 (322)
T 1p4o_A           21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG  100 (322)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence            345678999999999999999999764      367899999976532 3445688999999999999999999999999


Q ss_pred             CeeEEEEeeCCCCCHhHHHhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCc
Q 043278          499 EERLLVYEFMPNKSLDFFLFNSG-------RKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNP  571 (752)
Q Consensus       499 ~~~~lv~E~~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~  571 (752)
                      +..++||||+++++|.+++....       ....+++..++.++.||+.||.|||+++   |+||||||+|||++.++.+
T Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~  177 (322)
T 1p4o_A          101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTV  177 (322)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCE
T ss_pred             CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeE
Confidence            99999999999999999986532       1245789999999999999999999998   9999999999999999999


Q ss_pred             eecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHH
Q 043278          572 KISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAW  650 (752)
Q Consensus       572 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~  650 (752)
                      ||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....       ....
T Consensus       178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~~~  250 (322)
T 1p4o_A          178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-------EQVL  250 (322)
T ss_dssp             EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-------HHHH
T ss_pred             EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-------HHHH
Confidence            9999999986554333333334567889999999999999999999999999999999 8888865431       1112


Q ss_pred             HHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCC
Q 043278          651 QLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETM  708 (752)
Q Consensus       651 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~  708 (752)
                      ..+..+.....         +......+.+++.+|++.||.+|||+.|+++.|+....
T Consensus       251 ~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          251 RFVMEGGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             HHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHHHcCCcCCC---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            22222222111         11122457789999999999999999999999988643


No 63 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=5.6e-39  Score=343.57  Aligned_cols=253  Identities=24%  Similarity=0.314  Sum_probs=200.8

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCC-------
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGE-------  499 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------  499 (752)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++.+++||||+++++++.+..       
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            357888999999999999999976 68999999997543 334567899999999999999999999986543       


Q ss_pred             --------------------------------------------------eeEEEEeeCCCCCHhHHHhhcCCCCCCCHH
Q 043278          500 --------------------------------------------------ERLLVYEFMPNKSLDFFLFNSGRKNVLNWE  529 (752)
Q Consensus       500 --------------------------------------------------~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~  529 (752)
                                                                        ..++||||+++++|.+++..........+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                              378999999999999999876666667888


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccccc----------cccccccccCC
Q 043278          530 KRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESE----------ANTKRIVGTYG  599 (752)
Q Consensus       530 ~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~----------~~~~~~~gt~~  599 (752)
                      .++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++........          .......||+.
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  241 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL  241 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred             HHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence            89999999999999999998   999999999999999999999999999876543211          12234578999


Q ss_pred             ccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHH
Q 043278          600 YMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCI  679 (752)
Q Consensus       600 y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~  679 (752)
                      |+|||.+.+..++.++||||||+++|||++|..|+..         ...............         ........+.
T Consensus       242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~---------~~~~~~~~~~~~~~~---------~~~~~~~~~~  303 (332)
T 3qd2_B          242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME---------RVRIITDVRNLKFPL---------LFTQKYPQEH  303 (332)
T ss_dssp             GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH---------HHHHHHHHHTTCCCH---------HHHHHCHHHH
T ss_pred             ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH---------HHHHHHHhhccCCCc---------ccccCChhHH
Confidence            9999999999999999999999999999998654311         111111122211110         1122334567


Q ss_pred             HHHHHcccCCCCCCCCHHHHHHH
Q 043278          680 HVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       680 ~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      +++.+||+.||.+|||+.|++++
T Consensus       304 ~li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          304 MMVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             HHHHHHHCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHccCCCCcCCCHHHHhhc
Confidence            89999999999999999999874


No 64 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=2.3e-39  Score=350.18  Aligned_cols=252  Identities=24%  Similarity=0.294  Sum_probs=204.9

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc------ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG------QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEER  501 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  501 (752)
                      .++|.+.+.||+|+||.||+++.. +|+.||+|.+.....      .....+.+|+.++.+++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            467889999999999999999875 588999999976532      2357889999999999999999999999999999


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCC----Cceecccc
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKM----NPKISDFG  577 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~----~~kl~DFg  577 (752)
                      ++||||+++|+|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++    .+||+|||
T Consensus        91 ~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG  164 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG  164 (361)
T ss_dssp             EEEEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred             EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence            999999999999999853   346999999999999999999999998   99999999999998877    79999999


Q ss_pred             cceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCC
Q 043278          578 MARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGK  657 (752)
Q Consensus       578 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  657 (752)
                      +++......   ......||+.|+|||++.+..++.++||||||+++|||++|+.||......      .. ...+..+.
T Consensus       165 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~------~~-~~~i~~~~  234 (361)
T 2yab_A          165 LAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ET-LANITAVS  234 (361)
T ss_dssp             SCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HH-HHHHHTTC
T ss_pred             CceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH------HH-HHHHHhcC
Confidence            998765322   223467999999999999999999999999999999999999999765321      11 11121211


Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          658 GLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       658 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ..  .++....    .....+.+++.+||+.||.+|||+.|++++
T Consensus       235 ~~--~~~~~~~----~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          235 YD--FDEEFFS----QTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (361)
T ss_dssp             CC--CCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CC--CCchhcc----CCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            10  0000000    112356789999999999999999999864


No 65 
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=5.4e-39  Score=344.51  Aligned_cols=259  Identities=24%  Similarity=0.388  Sum_probs=209.7

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec--------CCceeEEEEcccCC-cccHHHHHHHHHHHHhc-CCCCcceeeeeeeeC
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA--------DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHG  498 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~--------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  498 (752)
                      .++|.+.+.||+|+||.||+|+..        ++..||||++.... .....++.+|+.++.++ +||||+++++++.+.
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            468888999999999999999863        46789999997653 33456789999999999 899999999999999


Q ss_pred             CeeEEEEeeCCCCCHhHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEe
Q 043278          499 EERLLVYEFMPNKSLDFFLFNSGR-------------KNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILL  565 (752)
Q Consensus       499 ~~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll  565 (752)
                      +..++||||+++++|.+++.....             ...+++..++.++.||+.||+|||+.+   |+||||||+|||+
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll  190 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV  190 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEE
Confidence            999999999999999999975432             234899999999999999999999998   9999999999999


Q ss_pred             cCCCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 043278          566 DDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLN  644 (752)
Q Consensus       566 ~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~  644 (752)
                      +.++.+||+|||+++...............+++.|+|||++.+..++.++||||||+++|||++ |+.||......    
T Consensus       191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----  266 (334)
T 2pvf_A          191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----  266 (334)
T ss_dssp             CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----
T ss_pred             cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH----
Confidence            9999999999999987654433333334567889999999999999999999999999999999 99998654311    


Q ss_pred             hHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          645 LIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       645 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                         .....+..+....     .    +......+.+++.+|++.||.+|||+.|+++.|+.+
T Consensus       267 ---~~~~~~~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l  316 (334)
T 2pvf_A          267 ---ELFKLLKEGHRMD-----K----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  316 (334)
T ss_dssp             ---HHHHHHHHTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---HHHHHHhcCCCCC-----C----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence               1122222222111     1    111224577889999999999999999999999876


No 66 
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=1.1e-39  Score=348.74  Aligned_cols=265  Identities=25%  Similarity=0.388  Sum_probs=211.0

Q ss_pred             cCCCcCCeeecCCcccEEEEEe-----cCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeee--eCCeeE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKL-----ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSL--HGEERL  502 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~  502 (752)
                      ++|++.+.||+|+||.||++++     ..++.||||++........+.+.+|++++.+++|+||+++++++.  +....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            5788889999999999999984     357889999998776666778999999999999999999999886  455789


Q ss_pred             EEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceee
Q 043278          503 LVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIF  582 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~  582 (752)
                      +||||+++++|.+++....  ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus       103 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  177 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLL  177 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred             EEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceec
Confidence            9999999999999986532  34899999999999999999999988   999999999999999999999999999876


Q ss_pred             cccccc-cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCC--------CCcchHHHHHHHh
Q 043278          583 EVNESE-ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPD--------RPLNLIGYAWQLL  653 (752)
Q Consensus       583 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~--------~~~~l~~~~~~~~  653 (752)
                      ...... .......++..|+|||.+.+..++.++||||||++++||++|+.|+......        .............
T Consensus       178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (327)
T 3lxl_A          178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL  257 (327)
T ss_dssp             CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred             ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence            543221 2223356788899999999999999999999999999999999987543210        0111111222222


Q ss_pred             hCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCC
Q 043278          654 SDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETM  708 (752)
Q Consensus       654 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~  708 (752)
                      ..+..         ...+......+.+++.+|++.||.+|||+.|++++|+.+..
T Consensus       258 ~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          258 EEGQR---------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             HTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             hcccC---------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            22211         11122233457789999999999999999999999998743


No 67 
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=9.3e-39  Score=336.62  Aligned_cols=261  Identities=18%  Similarity=0.219  Sum_probs=209.8

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCeeEEEEe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      .++|.+.+.||+|+||.||+|+. .+++.||||++.....  ...+.+|+.++.++ +|+|++++++++.++...++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            46788999999999999999986 5688999999865432  23578899999999 89999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCC-----ceeccccccee
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMN-----PKISDFGMARI  581 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~-----~kl~DFgla~~  581 (752)
                      |+ +++|.+++....  ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.     +||+|||+++.
T Consensus        87 ~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           87 LL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             CC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             ec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence            99 999999996542  35899999999999999999999988   999999999999987776     99999999987


Q ss_pred             ecccccc-----cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCC
Q 043278          582 FEVNESE-----ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDG  656 (752)
Q Consensus       582 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  656 (752)
                      .......     .......||+.|+|||.+.+..++.++||||||+++|||++|+.||......................
T Consensus       161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  240 (298)
T 1csn_A          161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST  240 (298)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc
Confidence            6543221     12334678999999999999999999999999999999999999998765443322222211111111


Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          657 KGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       657 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      ....+     ...    ....+.+++.+|++.||.+|||+++|++.|+.+
T Consensus       241 ~~~~~-----~~~----~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~  281 (298)
T 1csn_A          241 PLREL-----CAG----FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  281 (298)
T ss_dssp             CHHHH-----TTT----SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             cHHHH-----Hhh----CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence            11111     011    124577899999999999999999999999875


No 68 
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=8.8e-40  Score=350.43  Aligned_cols=261  Identities=26%  Similarity=0.414  Sum_probs=209.8

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEecC-C-----ceeEEEEcccCC-cccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCC
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLAD-E-----QEVAIKRLSRSS-GQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGE  499 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~~-~-----~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  499 (752)
                      ..++|.+.+.||+|+||.||+|.... +     ..||+|.+.... ......+.+|+.++.++ +||||+++++++.+++
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  123 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG  123 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence            34788999999999999999998643 2     479999997653 23456789999999999 8999999999999999


Q ss_pred             eeEEEEeeCCCCCHhHHHhhcC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCC
Q 043278          500 ERLLVYEFMPNKSLDFFLFNSG-----------RKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDK  568 (752)
Q Consensus       500 ~~~lv~E~~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~  568 (752)
                      ..++||||+++|+|.+++....           ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.+
T Consensus       124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~  200 (333)
T 2i1m_A          124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNG  200 (333)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGG
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCC
Confidence            9999999999999999986532           1345899999999999999999999998   9999999999999999


Q ss_pred             CCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHH
Q 043278          569 MNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIG  647 (752)
Q Consensus       569 ~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~  647 (752)
                      +.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |..||.......      
T Consensus       201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------  274 (333)
T 2i1m_A          201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS------  274 (333)
T ss_dssp             GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH------
T ss_pred             CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH------
Confidence            9999999999987654433333334567889999999999999999999999999999999 888987654221      


Q ss_pred             HHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          648 YAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       648 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      ........+....  .+       ......+.+++.+||+.||.+|||+.||+++|+..
T Consensus       275 ~~~~~~~~~~~~~--~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  324 (333)
T 2i1m_A          275 KFYKLVKDGYQMA--QP-------AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ  324 (333)
T ss_dssp             HHHHHHHHTCCCC--CC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCC--CC-------CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence            1112222221110  11       11124577899999999999999999999999764


No 69 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.7e-39  Score=345.57  Aligned_cols=252  Identities=23%  Similarity=0.317  Sum_probs=204.2

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc------ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG------QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEER  501 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  501 (752)
                      .++|.+.+.||+|+||.||+++.. +++.||+|.+.....      .....+.+|+.++.+++||||+++++++.+.+..
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            357888999999999999999875 588999999875432      2467899999999999999999999999999999


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCC----Cceecccc
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKM----NPKISDFG  577 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~----~~kl~DFg  577 (752)
                      ++||||+++++|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++    .+||+|||
T Consensus        90 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg  163 (326)
T 2y0a_A           90 ILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFG  163 (326)
T ss_dssp             EEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred             EEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence            999999999999999853   345899999999999999999999998   99999999999998887    79999999


Q ss_pred             cceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCC
Q 043278          578 MARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGK  657 (752)
Q Consensus       578 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  657 (752)
                      +++......   ......||+.|+|||++.+..++.++||||||+++|||++|+.||......      .... .+....
T Consensus       164 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~-~~~~~~  233 (326)
T 2y0a_A          164 LAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLA-NVSAVN  233 (326)
T ss_dssp             TCEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHH-HHHHTC
T ss_pred             CCeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH------HHHH-HHHhcC
Confidence            998764322   123457899999999999999999999999999999999999999754321      1111 111111


Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          658 GLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       658 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      . .. .+....    .....+.+++.+||+.||.+|||+.|++++
T Consensus       234 ~-~~-~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          234 Y-EF-EDEYFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             C-CC-CHHHHT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             C-Cc-Cccccc----cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            0 00 000000    112356788999999999999999999985


No 70 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=2.3e-39  Score=358.16  Aligned_cols=264  Identities=18%  Similarity=0.227  Sum_probs=207.9

Q ss_pred             cHHHHHHHhcCCCcCCeeecCCcccEEEEEecC-CceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeee
Q 043278          421 DFQTIAAAANNFSTTNKLGEGGFGPVYKGKLAD-EQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSL  496 (752)
Q Consensus       421 ~~~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  496 (752)
                      .+.++....++|++.++||+|+||+||+++... ++.||+|++.+..   ......+.+|..++..++||||+++++++.
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  144 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ  144 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            445555667899999999999999999999765 7889999986531   112234789999999999999999999999


Q ss_pred             eCCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceeccc
Q 043278          497 HGEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDF  576 (752)
Q Consensus       497 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DF  576 (752)
                      +++..+|||||+++|+|..++...  ...+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+||
T Consensus       145 ~~~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DF  219 (437)
T 4aw2_A          145 DDNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADF  219 (437)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcch
Confidence            999999999999999999999652  345999999999999999999999998   999999999999999999999999


Q ss_pred             ccceeecccccccccccccccCCccChhhhc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHH
Q 043278          577 GMARIFEVNESEANTKRIVGTYGYMSPEYAM-----SGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQ  651 (752)
Q Consensus       577 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~  651 (752)
                      |+++........ ......||+.|+|||++.     ...++.++|||||||++|||++|+.||......+      ....
T Consensus       220 Gla~~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~------~~~~  292 (437)
T 4aw2_A          220 GSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGK  292 (437)
T ss_dssp             TTCEECCTTSCE-ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHH
T ss_pred             hhhhhcccCCCc-ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH------HHHh
Confidence            999865433221 223468999999999987     5679999999999999999999999997654221      1111


Q ss_pred             HhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 043278          652 LLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMD--RPTMPEVVCM  702 (752)
Q Consensus       652 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~--RPt~~ev~~~  702 (752)
                      .+....  .+.-|......    ...+.+|+.+|++.+|++  ||+++|++++
T Consensus       293 i~~~~~--~~~~p~~~~~~----s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          293 IMNHKE--RFQFPTQVTDV----SENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             HHTHHH--HCCCCSSCCCS----CHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             hhhccc--cccCCcccccC----CHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence            111100  00011110111    234667888999888887  9999999886


No 71 
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=5.3e-39  Score=337.05  Aligned_cols=251  Identities=24%  Similarity=0.361  Sum_probs=202.9

Q ss_pred             cCCCcCCeeecCCcccEEEEEecC-C-------ceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCee
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLAD-E-------QEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEER  501 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~-~-------~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  501 (752)
                      ++|.+.+.||+|+||.||+|+... +       ..||+|++........+.+.+|+.++.+++||||+++++++.+++..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            578888999999999999998643 3       46999999877667778899999999999999999999999999999


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCC--------cee
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMN--------PKI  573 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~--------~kl  573 (752)
                      ++||||+++++|.+++...  ...+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.        +||
T Consensus        88 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl  162 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL  162 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred             EEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeee
Confidence            9999999999999999653  334899999999999999999999998   999999999999998887        999


Q ss_pred             cccccceeecccccccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHH
Q 043278          574 SDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQL  652 (752)
Q Consensus       574 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~  652 (752)
                      +|||++.....      .....+++.|+|||.+.+ ..++.++||||||+++|||++|..|+.....     ... ....
T Consensus       163 ~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~-----~~~-~~~~  230 (289)
T 4fvq_A          163 SDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-----SQR-KLQF  230 (289)
T ss_dssp             CCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----HHH-HHHH
T ss_pred             ccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc-----hHH-HHHH
Confidence            99999864322      123457889999999987 7799999999999999999996554433221     111 1111


Q ss_pred             hhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCC
Q 043278          653 LSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETM  708 (752)
Q Consensus       653 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~  708 (752)
                      .....  .+ .+    ..    ...+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus       231 ~~~~~--~~-~~----~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          231 YEDRH--QL-PA----PK----AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             HHTTC--CC-CC----CS----SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             hhccC--CC-CC----CC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            11111  00 01    11    1236688899999999999999999999998755


No 72 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.3e-38  Score=335.81  Aligned_cols=249  Identities=23%  Similarity=0.330  Sum_probs=194.8

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc--------------------------ccHHHHHHHHHHHHh
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG--------------------------QGIVEFKNEVRLIAK  482 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--------------------------~~~~~~~~E~~~l~~  482 (752)
                      ++|.+.+.||+|+||.||+|+.. +++.||||++.....                          ...+++.+|+.++++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            57888999999999999999864 578999999865431                          123468899999999


Q ss_pred             cCCCCcceeeeeeee--CCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCC
Q 043278          483 LQHTNLVRLLGCSLH--GEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKA  560 (752)
Q Consensus       483 l~h~niv~l~~~~~~--~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp  560 (752)
                      ++||||+++++++.+  ++..++||||+++++|.+++    ....+++..+..++.||+.||+|||+.+   |+||||||
T Consensus        93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp  165 (298)
T 2zv2_A           93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP----TLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKP  165 (298)
T ss_dssp             CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS----CSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCG
T ss_pred             CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCH
Confidence            999999999999986  56889999999999997765    3346999999999999999999999998   99999999


Q ss_pred             CcEEecCCCCceecccccceeecccccccccccccccCCccChhhhccCC---CCccchhHHHHHHHHHHHhCCCCCCCC
Q 043278          561 SNILLDDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGI---VSIKTDVFSFGVLVLEIVSGQKNHTRH  637 (752)
Q Consensus       561 ~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~t~k~DV~S~G~vl~elltG~~p~~~~  637 (752)
                      +|||++.++.+||+|||+++.......  ......||+.|+|||.+.+..   ++.++||||||+++|||++|+.||...
T Consensus       166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  243 (298)
T 2zv2_A          166 SNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE  243 (298)
T ss_dssp             GGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             HHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence            999999999999999999987643321  123457899999999987755   478999999999999999999999654


Q ss_pred             CCCCCcchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          638 HPDRPLNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       638 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ..      .... ..+..... ...+       .......+.+++.+||+.||++|||+.|++++
T Consensus       244 ~~------~~~~-~~~~~~~~-~~~~-------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          244 RI------MCLH-SKIKSQAL-EFPD-------QPDIAEDLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             SH------HHHH-HHHHHCCC-CCCS-------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             cH------HHHH-HHHhcccC-CCCC-------ccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            31      1111 11111111 1000       01122357789999999999999999999753


No 73 
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=3.1e-39  Score=345.21  Aligned_cols=256  Identities=27%  Similarity=0.409  Sum_probs=199.2

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCce----eEEEEcccC-CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQE----VAIKRLSRS-SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~----vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  503 (752)
                      ++|++.+.||+|+||.||+|+.. +++.    ||+|.+... ......++.+|+.++.+++||||+++++++..+. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence            67888999999999999999864 4544    577777543 3456778999999999999999999999998754 789


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      |+||+++|+|.+++...  ...+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        94 v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~  168 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             EECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred             EEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence            99999999999998654  345899999999999999999999998   9999999999999999999999999998765


Q ss_pred             ccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCccccc
Q 043278          584 VNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  662 (752)
                      ............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......   +    ...+..+....  
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~----~~~~~~~~~~~--  239 (327)
T 3lzb_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---I----SSILEKGERLP--  239 (327)
T ss_dssp             -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---H----HHHHHTTCCCC--
T ss_pred             CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---H----HHHHHcCCCCC--
Confidence            4433333334556788999999999999999999999999999999 999997654321   1    11222221111  


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCC
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNET  707 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~  707 (752)
                             .+......+.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus       240 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  277 (327)
T 3lzb_A          240 -------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             -------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence                   11112335778999999999999999999999998764


No 74 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=7.4e-39  Score=349.46  Aligned_cols=255  Identities=22%  Similarity=0.316  Sum_probs=201.2

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCeeEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  504 (752)
                      ++|++.++||+|+||+||+++.. +++.||||++++..   ......+.+|..++.++ +||||+++++++.+.+..++|
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV  131 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV  131 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence            57888999999999999999975 47889999997642   22234578899999887 899999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||+++|+|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++....
T Consensus       132 ~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~  205 (396)
T 4dc2_A          132 IEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  205 (396)
T ss_dssp             EECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence            9999999999988653   35899999999999999999999998   99999999999999999999999999985322


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC--cchHHHHHHHhhCCCccccc
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRP--LNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~  662 (752)
                      .  .......+||+.|+|||++.+..++.++|||||||++|||++|+.||........  ........+....+..    
T Consensus       206 ~--~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~----  279 (396)
T 4dc2_A          206 P--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----  279 (396)
T ss_dssp             T--TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC----
T ss_pred             C--CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc----
Confidence            2  1223457899999999999999999999999999999999999999975432211  1111222222222211    


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTM------PEVVCM  702 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~------~ev~~~  702 (752)
                        .+    +......+.+|+.+||+.||.+||++      .|++++
T Consensus       280 --~~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H  319 (396)
T 4dc2_A          280 --RI----PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  319 (396)
T ss_dssp             --CC----CTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred             --CC----CCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence              11    11122356789999999999999996      566554


No 75 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=2.3e-39  Score=335.55  Aligned_cols=254  Identities=28%  Similarity=0.403  Sum_probs=208.9

Q ss_pred             cCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeCC
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFMP  509 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  509 (752)
                      ++|.+.+.||+|+||.||++...+++.||+|++..... ..+++.+|+.++.+++||||+++++++.+.+..++||||++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            57788899999999999999998888999999976543 45688999999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccccccc
Q 043278          510 NKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESEA  589 (752)
Q Consensus       510 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~~  589 (752)
                      +++|.+++...  ...+++..++.++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||+++....... .
T Consensus        87 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~  160 (267)
T 3t9t_A           87 HGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-T  160 (267)
T ss_dssp             TCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH-H
T ss_pred             CCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccccccc-c
Confidence            99999999653  345899999999999999999999998   99999999999999999999999999986543221 1


Q ss_pred             ccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCC
Q 043278          590 NTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQ  668 (752)
Q Consensus       590 ~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  668 (752)
                      ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......       .....+..+...  ..+    
T Consensus       161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~i~~~~~~--~~~----  227 (267)
T 3t9t_A          161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-------EVVEDISTGFRL--YKP----  227 (267)
T ss_dssp             STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHTTCCC--CCC----
T ss_pred             ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-------HHHHHHhcCCcC--CCC----
Confidence            1223456788999999999999999999999999999999 89888754311       111222222111  111    


Q ss_pred             CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          669 PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       669 ~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                         ......+.+++.+|++.||.+|||+.|++++|+.+
T Consensus       228 ---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l  262 (267)
T 3t9t_A          228 ---RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI  262 (267)
T ss_dssp             ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence               11224577899999999999999999999999865


No 76 
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=1.1e-39  Score=371.58  Aligned_cols=261  Identities=28%  Similarity=0.433  Sum_probs=211.6

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeC
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFM  508 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  508 (752)
                      .++|.+.++||+|+||.||+|.+.++..||||+++... ...++|.+|+++|.+++|+||+++++++.+ +..+|||||+
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~  343 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM  343 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence            46788889999999999999999888889999997654 346789999999999999999999999876 6789999999


Q ss_pred             CCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccccc
Q 043278          509 PNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESE  588 (752)
Q Consensus       509 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~  588 (752)
                      ++|+|.+++... ....+++..++.++.||+.||+|||+++   |+||||||+||||++++.+||+|||+++....... 
T Consensus       344 ~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-  418 (535)
T 2h8h_A          344 SKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-  418 (535)
T ss_dssp             TTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH-
T ss_pred             cCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCce-
Confidence            999999999542 1235899999999999999999999998   99999999999999999999999999986543221 


Q ss_pred             cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCC
Q 043278          589 ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLE  667 (752)
Q Consensus       589 ~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  667 (752)
                      .......++..|+|||.+....++.++||||||++||||++ |+.||......       .....+..+....       
T Consensus       419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-------~~~~~i~~~~~~~-------  484 (535)
T 2h8h_A          419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-------EVLDQVERGYRMP-------  484 (535)
T ss_dssp             HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-------HHHHHHHTTCCCC-------
T ss_pred             ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCCCC-------
Confidence            11223456788999999999999999999999999999999 89998754321       1122233322111       


Q ss_pred             CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCCCCCC
Q 043278          668 QPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETMPLPP  712 (752)
Q Consensus       668 ~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~~~~  712 (752)
                        .+......+.+|+.+||+.||++|||+.+|+++|+.+.....+
T Consensus       485 --~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~  527 (535)
T 2h8h_A          485 --CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP  527 (535)
T ss_dssp             --CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred             --CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence              1112234577899999999999999999999999987554433


No 77 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.4e-39  Score=344.97  Aligned_cols=252  Identities=20%  Similarity=0.275  Sum_probs=204.5

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEF  507 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  507 (752)
                      .++|.+.+.||+|+||.||+++.. +++.+|+|.+.... .....+.+|+.++..++||||+++++++.+.+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            367888999999999999999875 57889999987543 3455688999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC--CCCceecccccceeeccc
Q 043278          508 MPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD--KMNPKISDFGMARIFEVN  585 (752)
Q Consensus       508 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~--~~~~kl~DFgla~~~~~~  585 (752)
                      +++++|.+++...  ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.  ++.+||+|||+++.....
T Consensus        83 ~~g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~  157 (321)
T 1tki_A           83 ISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             CCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             CCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence            9999999998542  335899999999999999999999998   999999999999987  889999999999876433


Q ss_pred             ccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCC
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPS  665 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  665 (752)
                      .   ......||+.|+|||++.+..++.++||||||+++|||++|+.||......      ........ +...  .++.
T Consensus       158 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~-~~~~--~~~~  225 (321)
T 1tki_A          158 D---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ------QIIENIMN-AEYT--FDEE  225 (321)
T ss_dssp             C---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHH-TCCC--CCHH
T ss_pred             C---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH------HHHHHHHc-CCCC--CChh
Confidence            2   123457899999999999988999999999999999999999999765421      11111111 1110  0000


Q ss_pred             CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          666 LEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       666 l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ...    .....+.+++.+|++.||.+|||+.|++++
T Consensus       226 ~~~----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          226 AFK----EISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             HHT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             hhc----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            000    112457789999999999999999999986


No 78 
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=2e-39  Score=349.18  Aligned_cols=252  Identities=23%  Similarity=0.342  Sum_probs=196.9

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCC--cccHHHHHHHHHHHHhcCC--CCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQH--TNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv  504 (752)
                      .++|++.+.||+|+||.||++...+++.||||++....  ......+.+|+.++.+++|  +||+++++++.+++..++|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            45788899999999999999999889999999986543  3345678999999999976  9999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      || +.+++|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++ ++.+||+|||+++....
T Consensus        88 ~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~  159 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  159 (343)
T ss_dssp             EC-CCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred             Ee-CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence            99 5688999998653   45899999999999999999999998   99999999999997 57899999999987654


Q ss_pred             cccccccccccccCCccChhhhcc-----------CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHh
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMS-----------GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLL  653 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~  653 (752)
                      ...........||+.|+|||++.+           ..++.++||||||+++|||++|+.||....     ..........
T Consensus       160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~~~~  234 (343)
T 3dbq_A          160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAII  234 (343)
T ss_dssp             ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHH
T ss_pred             ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-----hHHHHHHHHh
Confidence            433333345679999999999865           678999999999999999999999996533     1122222222


Q ss_pred             hCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          654 SDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       654 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ....         ....+......+.+++.+||+.||.+|||+.|++++
T Consensus       235 ~~~~---------~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          235 DPNH---------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             CTTS---------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cCCc---------ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            1111         111111112356788999999999999999999876


No 79 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=3.6e-39  Score=347.75  Aligned_cols=249  Identities=23%  Similarity=0.328  Sum_probs=199.7

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccC---CcccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCeeEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRS---SGQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  503 (752)
                      .++|++.+.||+|+||.||+++.. +++.||||++++.   .......+.+|..++..+ +||||+++++++.+.+..++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            478999999999999999999875 5889999999754   233456678999999988 79999999999999999999


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      ||||+++|+|..++...   ..+++..+..++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++...
T Consensus       102 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~  175 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGI  175 (353)
T ss_dssp             EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             EEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecc
Confidence            99999999999998654   34899999999999999999999998   9999999999999999999999999998532


Q ss_pred             ccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccC
Q 043278          584 VNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELID  663 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  663 (752)
                      ..  .......+||+.|+|||++.+..++.++|||||||++|||++|+.||......      ........ +...    
T Consensus       176 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~-~~~~----  242 (353)
T 3txo_A          176 CN--GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED------DLFEAILN-DEVV----  242 (353)
T ss_dssp             C-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHH-CCCC----
T ss_pred             cC--CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH------HHHHHHHc-CCCC----
Confidence            22  12233468999999999999999999999999999999999999999765421      11112222 1110    


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 043278          664 PSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTM------PEVVCM  702 (752)
Q Consensus       664 ~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~------~ev~~~  702 (752)
                        .    +......+.+++.+|++.||.+||++      .|++++
T Consensus       243 --~----p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h  281 (353)
T 3txo_A          243 --Y----PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH  281 (353)
T ss_dssp             --C----CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred             --C----CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence              0    11122346788999999999999998      777664


No 80 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=3e-39  Score=337.64  Aligned_cols=255  Identities=24%  Similarity=0.330  Sum_probs=194.8

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecC----CceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLAD----EQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~----~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  503 (752)
                      .++|.+.+.||+|+||.||+|....    +..||+|++.... ......+.+|+.++.+++||||+++++++. ++..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence            3678888999999999999998743    4569999987643 334567899999999999999999999984 467889


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      ||||+++++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        93 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  167 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME  167 (281)
T ss_dssp             EEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             EEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccC
Confidence            99999999999999653  335899999999999999999999998   9999999999999999999999999998764


Q ss_pred             ccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCccccc
Q 043278          584 VNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  662 (752)
                      ..... ......+++.|+|||.+....++.++||||||+++|||++ |+.||.......   ..    ..+..+....  
T Consensus       168 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~~----~~i~~~~~~~--  237 (281)
T 1mp8_A          168 DSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VI----GRIENGERLP--  237 (281)
T ss_dssp             ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HH----HHHHTTCCCC--
T ss_pred             ccccc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---HH----HHHHcCCCCC--
Confidence            33211 1223456788999999999999999999999999999997 999987654221   11    1222222111  


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                         +    +......+.+++.+|++.||.+|||+.|+++.|+.+
T Consensus       238 ---~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  274 (281)
T 1mp8_A          238 ---M----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  274 (281)
T ss_dssp             ---C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---C----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence               1    111234577899999999999999999999999864


No 81 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=1e-38  Score=347.19  Aligned_cols=249  Identities=21%  Similarity=0.328  Sum_probs=202.9

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccC---CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRS---SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ++|.+.+.||+|+||.||+++.. +++.||+|++...   .......+.+|+.++.+++||||+++++++.+.+..++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            57888899999999999999875 4788999998653   2345567889999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      ||+++|+|..++..   ...+++..+..++.||+.||.|||+.+   |+||||||+||||+.++.+||+|||+++.....
T Consensus        95 e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  168 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE  168 (384)
T ss_dssp             CCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             ecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence            99999999999864   345999999999999999999999998   999999999999999999999999999875432


Q ss_pred             ccccccccccccCCccChhhhcc---CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCccccc
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMS---GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~---~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  662 (752)
                         .......||+.|+|||++..   ..++.++|||||||++|||++|+.||............    ........    
T Consensus       169 ---~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~----~~~~~~~~----  237 (384)
T 4fr4_A          169 ---TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV----HTFETTVV----  237 (384)
T ss_dssp             ---CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHH----HHHHHCCC----
T ss_pred             ---CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHH----HHHhhccc----
Confidence               22334689999999999874   45899999999999999999999999765543222111    11111110    


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPT-MPEVVC  701 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt-~~ev~~  701 (752)
                        .    .+......+.+|+.+||+.||.+||+ +++|.+
T Consensus       238 --~----~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          238 --T----YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             --C----CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             --C----CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence              0    11112345778999999999999998 777765


No 82 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=5.2e-39  Score=350.56  Aligned_cols=253  Identities=20%  Similarity=0.231  Sum_probs=206.2

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEF  507 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  507 (752)
                      .++|.+.+.||+|+||.||+|... +++.||+|.+..........+.+|+.++.+++||||+++++++.+....++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            357889999999999999999875 5889999999876555566789999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC--CCCceecccccceeeccc
Q 043278          508 MPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD--KMNPKISDFGMARIFEVN  585 (752)
Q Consensus       508 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~--~~~~kl~DFgla~~~~~~  585 (752)
                      +++|+|.+++...  ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.  ++.+||+|||+++.....
T Consensus       130 ~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~  204 (387)
T 1kob_A          130 LSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  204 (387)
T ss_dssp             CCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             CCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence            9999999988542  335899999999999999999999998   999999999999974  577999999999876433


Q ss_pred             ccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCC
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPS  665 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  665 (752)
                      .   ......||+.|+|||++.+..++.++|||||||++|||++|+.||......      ....... .....  .++.
T Consensus       205 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~------~~~~~i~-~~~~~--~~~~  272 (387)
T 1kob_A          205 E---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL------ETLQNVK-RCDWE--FDED  272 (387)
T ss_dssp             S---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHH-HCCCC--CCSS
T ss_pred             c---ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH------HHHHHHH-hCCCC--CCcc
Confidence            2   122357899999999999999999999999999999999999999765321      1111111 11110  1111


Q ss_pred             CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          666 LEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       666 l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .    .......+.+++.+||+.||.+|||+.|+++.
T Consensus       273 ~----~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          273 A----FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             T----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             c----cccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            1    11122457789999999999999999999986


No 83 
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=1e-38  Score=335.15  Aligned_cols=260  Identities=27%  Similarity=0.464  Sum_probs=195.7

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      .++|.+.++||+|+||.||+|+...  .||||+++...  ......+.+|+.++++++|+||+++++++ .....++|||
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e   99 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ   99 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence            4678899999999999999998643  59999987543  33456789999999999999999999965 4556899999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNE  586 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~  586 (752)
                      |+++++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......
T Consensus       100 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  174 (289)
T 3og7_A          100 WCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS  174 (289)
T ss_dssp             CCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred             ecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecccccccc
Confidence            99999999998543  345899999999999999999999998   9999999999999999999999999998655333


Q ss_pred             cccccccccccCCccChhhhc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccC
Q 043278          587 SEANTKRIVGTYGYMSPEYAM---SGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELID  663 (752)
Q Consensus       587 ~~~~~~~~~gt~~y~aPE~~~---~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  663 (752)
                      .........||+.|+|||.+.   ...++.++||||||+++|||++|+.||......      .........+.....+.
T Consensus       175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~  248 (289)
T 3og7_A          175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR------DQIIEMVGRGSLSPDLS  248 (289)
T ss_dssp             ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH------HHHHHHHHHTSCCCCTT
T ss_pred             ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH------HHHHHHhcccccCcchh
Confidence            333334467899999999986   667899999999999999999999999764421      11122222222211111


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCC
Q 043278          664 PSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNET  707 (752)
Q Consensus       664 ~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~  707 (752)
                       .+    .......+.+++.+|++.||.+|||+.|++++|+.+.
T Consensus       249 -~~----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          249 -KV----RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             -SS----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             -hc----cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence             11    1122346778999999999999999999999998864


No 84 
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=1.6e-39  Score=345.58  Aligned_cols=269  Identities=27%  Similarity=0.391  Sum_probs=214.5

Q ss_pred             ccHHHHHHHhcCCCcCCeeecCCcccEEEEEe------cCCceeEEEEcccCCc-ccHHHHHHHHHHHHhc-CCCCccee
Q 043278          420 FDFQTIAAAANNFSTTNKLGEGGFGPVYKGKL------ADEQEVAIKRLSRSSG-QGIVEFKNEVRLIAKL-QHTNLVRL  491 (752)
Q Consensus       420 ~~~~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~------~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l  491 (752)
                      ++..+.....++|.+.+.||+|+||.||+|+.      .+++.||||++..... .....+.+|+.++.++ +||||+++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            34445555678999999999999999999974      3467899999976533 3445789999999999 79999999


Q ss_pred             eeeeeeCC-eeEEEEeeCCCCCHhHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecC
Q 043278          492 LGCSLHGE-ERLLVYEFMPNKSLDFFLFNSGR-------------KNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRD  557 (752)
Q Consensus       492 ~~~~~~~~-~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~D  557 (752)
                      ++++...+ ..++||||+++++|.+++.....             ...+++..++.++.||+.||.|||+.+   |+|||
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~d  173 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD  173 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---ccccc
Confidence            99987654 58999999999999999975432             223899999999999999999999998   99999


Q ss_pred             CCCCcEEecCCCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCC
Q 043278          558 LKASNILLDDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTR  636 (752)
Q Consensus       558 ikp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~  636 (752)
                      |||+|||++.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus       174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~  253 (316)
T 2xir_A          174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  253 (316)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence            999999999999999999999987654433333344567889999999999999999999999999999998 9999876


Q ss_pred             CCCCCCcchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          637 HHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       637 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      .....      .....+..+.....         +......+.+++.+||+.||.+|||+.|++++|+.+
T Consensus       254 ~~~~~------~~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  308 (316)
T 2xir_A          254 VKIDE------EFCRRLKEGTRMRA---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  308 (316)
T ss_dssp             CCCSH------HHHHHHHHTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cchhH------HHHHHhccCccCCC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            54221      11122222221111         111223577889999999999999999999999865


No 85 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=7.8e-39  Score=337.99  Aligned_cols=263  Identities=26%  Similarity=0.413  Sum_probs=206.1

Q ss_pred             cCCCcCCeeecCCcccEEEEEe-----cCCceeEEEEcccC-CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeC--Cee
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKL-----ADEQEVAIKRLSRS-SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG--EER  501 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~-----~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  501 (752)
                      +.|++.+.||+|+||.||++++     .+++.||||++... .......+.+|+.++.+++||||+++++++.+.  +..
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4578889999999999999984     46789999999754 334567889999999999999999999999876  568


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                      ++||||+++++|.+++....  ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  175 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA  175 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccc
Confidence            99999999999999986533  34899999999999999999999998   99999999999999999999999999987


Q ss_pred             ecccccc-cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCC--------CCCCcchHHHHHHH
Q 043278          582 FEVNESE-ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHH--------PDRPLNLIGYAWQL  652 (752)
Q Consensus       582 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~--------~~~~~~l~~~~~~~  652 (752)
                      ....... .......+|..|+|||.+.+..++.++||||||+++|||++|+.|+....        +.............
T Consensus       176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (302)
T 4e5w_A          176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT  255 (302)
T ss_dssp             CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred             ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence            6543321 22334567888999999999999999999999999999999998753221        11111111122222


Q ss_pred             hhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          653 LSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       653 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      +..+...         +.+......+.+++.+||+.||.+|||+.|+++.|+.+
T Consensus       256 ~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  300 (302)
T 4e5w_A          256 LKEGKRL---------PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL  300 (302)
T ss_dssp             HHTTCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhccCCC---------CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence            2222211         11222234677899999999999999999999999864


No 86 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=7e-39  Score=336.82  Aligned_cols=263  Identities=22%  Similarity=0.284  Sum_probs=199.0

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      ++|++.++||+|+||+||+|+.. +++.||||++....  ......+.+|+.++.+++||||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            46888899999999999999875 58899999997543  2334678899999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNE  586 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~  586 (752)
                      |++++ |...+...  ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......
T Consensus        82 ~~~~~-l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  155 (292)
T 3o0g_A           82 FCDQD-LKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV  155 (292)
T ss_dssp             CCSEE-HHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCC
T ss_pred             cCCCC-HHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcc
Confidence            99864 44444332  345999999999999999999999998   9999999999999999999999999998764322


Q ss_pred             cccccccccccCCccChhhhccCC-CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcc------
Q 043278          587 SEANTKRIVGTYGYMSPEYAMSGI-VSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGL------  659 (752)
Q Consensus       587 ~~~~~~~~~gt~~y~aPE~~~~~~-~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~------  659 (752)
                        .......||+.|+|||++.+.. ++.++||||||++++||++|+.|+......  ........+........      
T Consensus       156 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~  231 (292)
T 3o0g_A          156 --RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV--DDQLKRIFRLLGTPTEEQWPSMT  231 (292)
T ss_dssp             --SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH--HHHHHHHHHHHCCCCTTTCTTGG
T ss_pred             --ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH--HHHHHHHHHHhCCCChhhhhhhc
Confidence              2223457899999999998765 899999999999999999998886433211  11111222211111000      


Q ss_pred             cccCC---------CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          660 ELIDP---------SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       660 ~~~d~---------~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ...+.         .............+.+++.+|++.||++|||++|++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            00000         00001111223456789999999999999999999874


No 87 
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=1.3e-38  Score=333.82  Aligned_cols=254  Identities=27%  Similarity=0.498  Sum_probs=201.8

Q ss_pred             cCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCccc-------HHHHHHHHHHHHhcCCCCcceeeeeeeeCCee
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQG-------IVEFKNEVRLIAKLQHTNLVRLLGCSLHGEER  501 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  501 (752)
                      ++|.+.+.||+|+||.||+|+. .+++.||+|++.......       ..++.+|+.++.+++||||+++++++.+..  
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--   96 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--   96 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence            6788889999999999999987 468899999986543221       167899999999999999999999987654  


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCC-----ceeccc
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMN-----PKISDF  576 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~-----~kl~DF  576 (752)
                      ++||||+++++|.+++...  ...+++..++.++.|++.||+|||+.+ .+|+||||||+|||++.++.     +||+||
T Consensus        97 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df  173 (287)
T 4f0f_A           97 RMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADF  173 (287)
T ss_dssp             EEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred             eEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence            6999999999998888643  346999999999999999999999875 34999999999999988776     999999


Q ss_pred             ccceeecccccccccccccccCCccChhhh--ccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhh
Q 043278          577 GMARIFEVNESEANTKRIVGTYGYMSPEYA--MSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLS  654 (752)
Q Consensus       577 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  654 (752)
                      |+++....     ......||+.|+|||.+  ....++.++||||||+++|||++|+.||.......    .........
T Consensus       174 g~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~  244 (287)
T 4f0f_A          174 GLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK----IKFINMIRE  244 (287)
T ss_dssp             TTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH----HHHHHHHHH
T ss_pred             Cccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH----HHHHHHHhc
Confidence            99974332     22346789999999998  45568899999999999999999999997654321    111111111


Q ss_pred             CCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          655 DGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       655 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      .+.     .+.+    +......+.+++.+||+.||.+|||+.|+++.|+.+
T Consensus       245 ~~~-----~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          245 EGL-----RPTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             SCC-----CCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             cCC-----CCCC----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            111     1111    112234577899999999999999999999999863


No 88 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=3.6e-39  Score=338.39  Aligned_cols=262  Identities=22%  Similarity=0.315  Sum_probs=199.3

Q ss_pred             cCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEee
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEF  507 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  507 (752)
                      ++|.+.+.||+|+||.||+|+...++.||+|++....  ......+.+|+.++++++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            4688889999999999999999889999999986543  22346788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccccc
Q 043278          508 MPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNES  587 (752)
Q Consensus       508 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~  587 (752)
                      +++ +|.+++...  ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...... 
T Consensus        82 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-  154 (288)
T 1ob3_A           82 LDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV-  154 (288)
T ss_dssp             CSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred             cCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCccc-
Confidence            985 888887543  245899999999999999999999998   9999999999999999999999999998654221 


Q ss_pred             ccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcc-------
Q 043278          588 EANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGL-------  659 (752)
Q Consensus       588 ~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~-------  659 (752)
                       .......+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||......   ................       
T Consensus       155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T 1ob3_A          155 -RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA---DQLMRIFRILGTPNSKNWPNVTE  230 (288)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             -cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHHCCCChhhchhhhc
Confidence             11223568999999999876 45899999999999999999999999765421   1111111111111000       


Q ss_pred             -cccCCCCCC-------CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          660 -ELIDPSLEQ-------PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       660 -~~~d~~l~~-------~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                       ...++....       .........+.+++.+|++.||++|||++|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (288)
T ss_dssp             STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence             001111100       0001123456789999999999999999999864


No 89 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=2.6e-38  Score=336.29  Aligned_cols=245  Identities=22%  Similarity=0.291  Sum_probs=203.6

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ++|++.+.||+|+||.||+++.. +|+.||+|++....   ......+.+|..++..++||||+++++++.+.+..++||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            57888899999999999999875 68899999987542   234567889999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      ||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.... 
T Consensus        86 e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-  158 (318)
T 1fot_A           86 DYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-  158 (318)
T ss_dssp             CCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS-
T ss_pred             eCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC-
Confidence            999999999999653   35899999999999999999999988   99999999999999999999999999986532 


Q ss_pred             ccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCC
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPS  665 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  665 (752)
                          ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....      .......... ..      .
T Consensus       159 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~i~~~-~~------~  221 (318)
T 1fot_A          159 ----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT------MKTYEKILNA-EL------R  221 (318)
T ss_dssp             ----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHC-CC------C
T ss_pred             ----ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHHhC-CC------C
Confidence                12346799999999999999999999999999999999999999975431      1112222221 11      0


Q ss_pred             CCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 043278          666 LEQPCSANEVMRCIHVGLLCVQDQAMDRP-----TMPEVVCM  702 (752)
Q Consensus       666 l~~~~~~~~~~~l~~l~~~Cl~~dp~~RP-----t~~ev~~~  702 (752)
                      +    +......+.+++.+|++.||.+||     +++|++++
T Consensus       222 ~----p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          222 F----PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             C----CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             C----CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence            1    111123567888999999999999     89999865


No 90 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=1.4e-38  Score=348.88  Aligned_cols=263  Identities=19%  Similarity=0.251  Sum_probs=204.7

Q ss_pred             hcCCCcCCeeecC--CcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEE
Q 043278          429 ANNFSTTNKLGEG--GFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       429 ~~~~~~~~~LG~G--~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  503 (752)
                      .++|++.++||+|  +||.||+++.. +++.||||++....  ......+.+|+.++++++||||+++++++.+++..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            4678899999999  99999999976 68999999997543  3344668889999999999999999999999999999


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      ||||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++....
T Consensus       104 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~  179 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMI  179 (389)
T ss_dssp             EEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred             EEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence            999999999999986542 345899999999999999999999998   9999999999999999999999999987653


Q ss_pred             cccc-----ccccccccccCCccChhhhcc--CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCC
Q 043278          584 VNES-----EANTKRIVGTYGYMSPEYAMS--GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDG  656 (752)
Q Consensus       584 ~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  656 (752)
                      ....     ........||+.|+|||++.+  ..++.++|||||||++|||++|+.||..........  .    .+ .+
T Consensus       180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~----~~-~~  252 (389)
T 3gni_B          180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL--E----KL-NG  252 (389)
T ss_dssp             ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH--H----C----
T ss_pred             cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH--H----Hh-cC
Confidence            2211     111223478899999999987  679999999999999999999999997654332110  0    00 00


Q ss_pred             CcccccCC------------------------------C------CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 043278          657 KGLELIDP------------------------------S------LEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVV  700 (752)
Q Consensus       657 ~~~~~~d~------------------------------~------l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~  700 (752)
                      ....+++.                              .      ...+........+.+|+.+||+.||++|||+.|++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell  332 (389)
T 3gni_B          253 TVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLL  332 (389)
T ss_dssp             -----------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred             CCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHh
Confidence            00000000                              0      00011122234678899999999999999999998


Q ss_pred             HH
Q 043278          701 CM  702 (752)
Q Consensus       701 ~~  702 (752)
                      ++
T Consensus       333 ~h  334 (389)
T 3gni_B          333 NH  334 (389)
T ss_dssp             TS
T ss_pred             cC
Confidence            76


No 91 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=1.3e-38  Score=344.90  Aligned_cols=253  Identities=23%  Similarity=0.315  Sum_probs=194.4

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEF  507 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  507 (752)
                      .++|.+.+.||+|+||.||+++.. +++.||||++..... ....+.+|+.++++++||||+++++++.+.+..++||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            367889999999999999999975 688999999976543 335688999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCC--ceecccccceeeccc
Q 043278          508 MPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMN--PKISDFGMARIFEVN  585 (752)
Q Consensus       508 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~--~kl~DFgla~~~~~~  585 (752)
                      +++|+|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.  +||+|||+++.....
T Consensus        98 ~~~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~  171 (361)
T 3uc3_A           98 ASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH  171 (361)
T ss_dssp             CCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred             CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence            9999999998653   34899999999999999999999998   999999999999987765  999999999743221


Q ss_pred             ccccccccccccCCccChhhhccCCCCcc-chhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIVSIK-TDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~k-~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                         .......||+.|+|||++.+..++.+ +||||||+++|||++|+.||.........  .......... ..      
T Consensus       172 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~--~~~~~~~~~~-~~------  239 (361)
T 3uc3_A          172 ---SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY--RKTIQRILSV-KY------  239 (361)
T ss_dssp             ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH--HHHHHHHHTT-CC------
T ss_pred             ---CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH--HHHHHHHhcC-CC------
Confidence               12234578999999999988887665 89999999999999999999865543322  1111222211 11      


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                        ..+........+.+|+.+||+.||.+|||+.|++++
T Consensus       240 --~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          240 --SIPDDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             --CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             --CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence              001111112456789999999999999999999886


No 92 
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=3.2e-39  Score=342.91  Aligned_cols=261  Identities=24%  Similarity=0.396  Sum_probs=197.8

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEecC----CceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCC--
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLAD----EQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGE--  499 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~~----~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--  499 (752)
                      ..++|.+.+.||+|+||.||+|....    ++.||+|++....  ......+.+|+.++.+++||||+++++++.+.+  
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  111 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ  111 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence            45788899999999999999997642    4579999987543  334567899999999999999999999987755  


Q ss_pred             ---eeEEEEeeCCCCCHhHHHhhc---CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCcee
Q 043278          500 ---ERLLVYEFMPNKSLDFFLFNS---GRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKI  573 (752)
Q Consensus       500 ---~~~lv~E~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl  573 (752)
                         ..++||||+++++|..++...   .....+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||
T Consensus       112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl  188 (313)
T 3brb_A          112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCV  188 (313)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEE
T ss_pred             CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEE
Confidence               349999999999999998543   23456999999999999999999999988   999999999999999999999


Q ss_pred             cccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHH
Q 043278          574 SDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQL  652 (752)
Q Consensus       574 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~  652 (752)
                      +|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......   ..    ..
T Consensus       189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~----~~  261 (313)
T 3brb_A          189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---MY----DY  261 (313)
T ss_dssp             CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HH----HH
T ss_pred             eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HH----HH
Confidence            99999987654332233334567889999999999999999999999999999999 888886654221   11    11


Q ss_pred             hhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCC
Q 043278          653 LSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNET  707 (752)
Q Consensus       653 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~  707 (752)
                      ...+.....         +......+.+++.+|++.||.+|||+.+++++|+.+.
T Consensus       262 ~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~  307 (313)
T 3brb_A          262 LLHGHRLKQ---------PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL  307 (313)
T ss_dssp             HHTTCCCCC---------BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHcCCCCCC---------CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            222211111         1112245778999999999999999999999998764


No 93 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=7.7e-39  Score=355.17  Aligned_cols=254  Identities=21%  Similarity=0.273  Sum_probs=204.3

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      ..++|.+.+.||+|+||.||++.. .+++.+|+|++....  ......+.+|+.++++++||||+++++++.+++..++|
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            457899999999999999999986 468899999987653  23345688999999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEec---CCCCceeccccccee
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLD---DKMNPKISDFGMARI  581 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~---~~~~~kl~DFgla~~  581 (752)
                      |||+++|+|.+.+...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++   .++.+||+|||+++.
T Consensus        89 ~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~  162 (444)
T 3soa_A           89 FDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIE  162 (444)
T ss_dssp             ECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred             EEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence            9999999999988653   45899999999999999999999998   99999999999998   567899999999986


Q ss_pred             ecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccc
Q 043278          582 FEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLEL  661 (752)
Q Consensus       582 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  661 (752)
                      ......  ......||+.|+|||++.+..++.++||||+||++|||++|+.||......       .....+..+.. ..
T Consensus       163 ~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~-------~~~~~i~~~~~-~~  232 (444)
T 3soa_A          163 VEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH-------RLYQQIKAGAY-DF  232 (444)
T ss_dssp             CCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHTCC-CC
T ss_pred             ecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH-------HHHHHHHhCCC-CC
Confidence            543321  223467999999999999999999999999999999999999999654411       11222222221 11


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          662 IDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       662 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ..+..     ......+.+++.+||+.||.+|||+.|++++
T Consensus       233 ~~~~~-----~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          233 PSPEW-----DTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             CTTTT-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             Ccccc-----ccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            11111     1122456788999999999999999999985


No 94 
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=7.6e-39  Score=347.61  Aligned_cols=266  Identities=17%  Similarity=0.197  Sum_probs=202.3

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecC------CceeEEEEcccCCcccH-----------HHHHHHHHHHHhcCCCCccee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLAD------EQEVAIKRLSRSSGQGI-----------VEFKNEVRLIAKLQHTNLVRL  491 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~------~~~vavK~l~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l  491 (752)
                      .++|.+.+.||+|+||.||+|.+..      ++.||||++........           ..+..|+..+..++|+||+++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            4688899999999999999998765      47899999876542111           123345556677789999999


Q ss_pred             eeeeeeC----CeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEec-
Q 043278          492 LGCSLHG----EERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLD-  566 (752)
Q Consensus       492 ~~~~~~~----~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~-  566 (752)
                      ++++...    ...+|||||+ +++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+||||+ 
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~  187 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNY  187 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEES
T ss_pred             EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEec
Confidence            9998764    4589999999 99999998653  345999999999999999999999998   99999999999999 


Q ss_pred             -CCCCceecccccceeeccccccc-----ccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCC
Q 043278          567 -DKMNPKISDFGMARIFEVNESEA-----NTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPD  640 (752)
Q Consensus       567 -~~~~~kl~DFgla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~  640 (752)
                       .++.+||+|||+++.+.......     ......||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus       188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~  267 (364)
T 3op5_A          188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD  267 (364)
T ss_dssp             SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred             CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence             89999999999998765432211     112356999999999999999999999999999999999999999864322


Q ss_pred             CCcchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          641 RPLNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       641 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      .  ........... ....+++++.+....   ....+.+++..|++.+|.+||++.+|++.|+..
T Consensus       268 ~--~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~  327 (364)
T 3op5_A          268 P--KYVRDSKIRYR-ENIASLMDKCFPAAN---APGEIAKYMETVKLLDYTEKPLYENLRDILLQG  327 (364)
T ss_dssp             H--HHHHHHHHHHH-HCHHHHHHHHSCTTC---CCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             H--HHHHHHHHHhh-hhHHHHHHHhccccc---CHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            1  11111111111 122223332221111   123567888899999999999999999998765


No 95 
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=8.6e-39  Score=340.18  Aligned_cols=266  Identities=23%  Similarity=0.293  Sum_probs=207.3

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeee----CCeeEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLH----GEERLL  503 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l  503 (752)
                      .++|.+.+.||+|+||.||+++. .+++.||||++..........+.+|+.++.+++||||+++++++..    ....++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            46889999999999999999987 5689999999977666667789999999999999999999999873    347889


Q ss_pred             EEeeCCCCCHhHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceee
Q 043278          504 VYEFMPNKSLDFFLFNS-GRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIF  582 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~  582 (752)
                      ||||+++++|.+++... .....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++...
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence            99999999999988653 23456999999999999999999999998   999999999999999999999999998765


Q ss_pred             cccccc-------cccccccccCCccChhhhccCC---CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHH
Q 043278          583 EVNESE-------ANTKRIVGTYGYMSPEYAMSGI---VSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQL  652 (752)
Q Consensus       583 ~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~---~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~  652 (752)
                      ......       .......||+.|+|||.+....   ++.++||||||+++|||++|+.||......... ..    ..
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~----~~  259 (317)
T 2buj_A          185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS-VA----LA  259 (317)
T ss_dssp             CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC-HH----HH
T ss_pred             ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch-hh----HH
Confidence            321111       0112345789999999987654   789999999999999999999998542211111 11    11


Q ss_pred             hhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCCCCC
Q 043278          653 LSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETMPLP  711 (752)
Q Consensus       653 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~~~  711 (752)
                      .....  .       .+........+.+++.+||+.||.+|||+.|+++.|+.+..+.|
T Consensus       260 ~~~~~--~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~  309 (317)
T 2buj_A          260 VQNQL--S-------IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP  309 (317)
T ss_dssp             HHCC-----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred             hhccC--C-------CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence            11100  0       01111123457789999999999999999999999998765333


No 96 
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=3.4e-39  Score=336.77  Aligned_cols=255  Identities=31%  Similarity=0.451  Sum_probs=206.9

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeC
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFM  508 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~  508 (752)
                      .++|.+.+.||+|+||.||+|...+++.||||.+.... ...+.+.+|++++.+++||||+++++++.+ +..++||||+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~   89 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM   89 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence            35788889999999999999999888899999997643 356789999999999999999999999864 5689999999


Q ss_pred             CCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccccc
Q 043278          509 PNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESE  588 (752)
Q Consensus       509 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~  588 (752)
                      ++++|.+++.... ...+++..++.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++........
T Consensus        90 ~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  165 (279)
T 1qpc_A           90 ENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT  165 (279)
T ss_dssp             TTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred             CCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence            9999999985321 125899999999999999999999998   999999999999999999999999999876533221


Q ss_pred             cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCC
Q 043278          589 ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLE  667 (752)
Q Consensus       589 ~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~  667 (752)
                       ......++..|+|||.+.+..++.++||||||++++||++ |+.||......       .....+..+....     . 
T Consensus       166 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-------~~~~~~~~~~~~~-----~-  231 (279)
T 1qpc_A          166 -AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-------EVIQNLERGYRMV-----R-  231 (279)
T ss_dssp             -CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTTCCCC-----C-
T ss_pred             -cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-------HHHHHHhcccCCC-----C-
Confidence             1223456788999999998999999999999999999999 89888654311       1112222221111     1 


Q ss_pred             CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          668 QPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       668 ~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                         +......+.+++.+|++.||++|||+.++++.|+..
T Consensus       232 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  267 (279)
T 1qpc_A          232 ---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF  267 (279)
T ss_dssp             ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence               111224577899999999999999999999999875


No 97 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=1.6e-39  Score=356.57  Aligned_cols=259  Identities=22%  Similarity=0.276  Sum_probs=206.1

Q ss_pred             HHHHHHhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeC
Q 043278          423 QTIAAAANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG  498 (752)
Q Consensus       423 ~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  498 (752)
                      .++....++|.+.++||+|+||+||+++.. +++.||+|++.+..   ......+.+|+.++..++||||+++++++.++
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~  141 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  141 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            344456788999999999999999999975 47889999986521   12233578999999999999999999999999


Q ss_pred             CeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceeccccc
Q 043278          499 EERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGM  578 (752)
Q Consensus       499 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgl  578 (752)
                      +..++||||+++|+|..++..    ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+
T Consensus       142 ~~~~lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~  214 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT  214 (410)
T ss_dssp             SEEEEEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             CEEEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccce
Confidence            999999999999999998854    24899999999999999999999998   99999999999999999999999999


Q ss_pred             ceeecccccccccccccccCCccChhhhccCC----CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhh
Q 043278          579 ARIFEVNESEANTKRIVGTYGYMSPEYAMSGI----VSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLS  654 (752)
Q Consensus       579 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  654 (752)
                      ++....... ......+||+.|+|||++.+..    ++.++|||||||++|||++|+.||......      ......+.
T Consensus       215 a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~  287 (410)
T 3v8s_A          215 CMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMN  287 (410)
T ss_dssp             CEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHT
T ss_pred             eEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh------hHHHHHHh
Confidence            987653322 1223468999999999998765    889999999999999999999999765421      11111111


Q ss_pred             CCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 043278          655 DGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMD--RPTMPEVVCM  702 (752)
Q Consensus       655 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~--RPt~~ev~~~  702 (752)
                      ......+  |.     .......+.+|+.+|++.+|.+  ||+++||+++
T Consensus       288 ~~~~~~~--p~-----~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          288 HKNSLTF--PD-----DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             HHHHCCC--CT-----TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             ccccccC--CC-----cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence            1000011  10     0011235678888999999988  9999999986


No 98 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=5.2e-39  Score=336.94  Aligned_cols=256  Identities=26%  Similarity=0.404  Sum_probs=210.1

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecC-CceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLAD-EQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEF  507 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  507 (752)
                      .++|++.+.||+|+||.||+|.... +..||+|.+.... ....++.+|+.++++++||||+++++++.+++..++||||
T Consensus        12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   90 (288)
T 3kfa_A           12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   90 (288)
T ss_dssp             GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence            4678888999999999999999764 7889999997543 3467789999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccccc
Q 043278          508 MPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNES  587 (752)
Q Consensus       508 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~  587 (752)
                      +++++|.+++.... ...+++..++.++.||+.||+|||+.+   |+|+||||+||+++.++.+||+|||++........
T Consensus        91 ~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  166 (288)
T 3kfa_A           91 MTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY  166 (288)
T ss_dssp             CTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred             CCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence            99999999996543 355899999999999999999999998   99999999999999999999999999986543322


Q ss_pred             ccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCC
Q 043278          588 EANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSL  666 (752)
Q Consensus       588 ~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  666 (752)
                       .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......   .    ...+......       
T Consensus       167 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~----~~~~~~~~~~-------  231 (288)
T 3kfa_A          167 -TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---V----YELLEKDYRM-------  231 (288)
T ss_dssp             -EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---H----HHHHHTTCCC-------
T ss_pred             -ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---H----HHHHhccCCC-------
Confidence             12223456789999999999999999999999999999999 999987654221   1    1112111111       


Q ss_pred             CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          667 EQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       667 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                        ..+......+.+++.+|++.||.+|||+.|+++.|+.+
T Consensus       232 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~  269 (288)
T 3kfa_A          232 --ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  269 (288)
T ss_dssp             --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence              11112234577899999999999999999999999764


No 99 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=6.5e-39  Score=347.38  Aligned_cols=253  Identities=22%  Similarity=0.302  Sum_probs=204.5

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      ..++|.+.+.||+|+||.||++... +++.||+|++....  ......+.+|+.++.+++||||+++++++.+++..++|
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv  106 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV  106 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            3568999999999999999999875 58899999997543  23446788999999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCC---CCceeccccccee
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDK---MNPKISDFGMARI  581 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~---~~~kl~DFgla~~  581 (752)
                      |||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.+   +.+||+|||++..
T Consensus       107 ~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~  180 (362)
T 2bdw_A          107 FDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE  180 (362)
T ss_dssp             ECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred             EecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence            999999999988853   345899999999999999999999998   9999999999999765   4599999999986


Q ss_pred             ecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccc
Q 043278          582 FEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLEL  661 (752)
Q Consensus       582 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  661 (752)
                      .....   ......||+.|+|||++.+..++.++|||||||++|||++|+.||......       .....+..+... .
T Consensus       181 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-------~~~~~i~~~~~~-~  249 (362)
T 2bdw_A          181 VNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-------RLYAQIKAGAYD-Y  249 (362)
T ss_dssp             CTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTCCC-C
T ss_pred             ecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhCCCC-C
Confidence            54322   123467899999999999999999999999999999999999999764321       111222222111 0


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          662 IDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       662 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ..+.     .......+.+++.+||+.||.+|||+.|++++
T Consensus       250 ~~~~-----~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          250 PSPE-----WDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             CTTG-----GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             Cccc-----ccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0110     01122456789999999999999999999875


No 100
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=1.8e-38  Score=342.02  Aligned_cols=267  Identities=18%  Similarity=0.204  Sum_probs=199.7

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec----CCceeEEEEcccCCcc-----------cHHHHHHHHHHHHhcCCCCcceeee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA----DEQEVAIKRLSRSSGQ-----------GIVEFKNEVRLIAKLQHTNLVRLLG  493 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~----~~~~vavK~l~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~  493 (752)
                      .++|.+.+.||+|+||.||+|...    .+..+|||++......           ....+.+|+..+..++|+||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            367888999999999999999975    5678999998765322           1123567888899999999999999


Q ss_pred             eeee----CCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCC
Q 043278          494 CSLH----GEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKM  569 (752)
Q Consensus       494 ~~~~----~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~  569 (752)
                      ++..    ....++||||+ +++|.+++....   .+++..++.++.||+.||+|||+.+   |+||||||+|||++.++
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~  188 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKN  188 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSS
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCC
Confidence            9987    67899999999 999999985432   6999999999999999999999998   99999999999998887


Q ss_pred             --Cceecccccceeecccccc-----cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC
Q 043278          570 --NPKISDFGMARIFEVNESE-----ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRP  642 (752)
Q Consensus       570 --~~kl~DFgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~  642 (752)
                        .+||+|||+++.+......     .......||+.|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus       189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~  268 (345)
T 2v62_A          189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV  268 (345)
T ss_dssp             TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred             CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence              9999999999876533211     111345789999999999999999999999999999999999999965332211


Q ss_pred             cchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCC
Q 043278          643 LNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETM  708 (752)
Q Consensus       643 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~  708 (752)
                        ............ ....+.....   .......+.+++..||+.||++|||+.+|++.|+....
T Consensus       269 --~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          269 --AVQTAKTNLLDE-LPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             --HHHHHHHHHHHT-TTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             --HHHHHHHhhccc-ccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence              111111111111 0000000000   00122357788999999999999999999999998765


No 101
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=4.5e-39  Score=352.30  Aligned_cols=252  Identities=21%  Similarity=0.325  Sum_probs=197.7

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCC--cccHHHHHHHHHHHHhcC--CCCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQ--HTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv  504 (752)
                      .++|.+.+.||+|+||.||++....++.||||++....  ......+.+|+.++.+++  |+||+++++++..++..+||
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  134 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  134 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence            35688999999999999999998889999999986542  344567899999999996  59999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      || +.+++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++ ++.+||+|||+++.+..
T Consensus       135 ~E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~  206 (390)
T 2zmd_A          135 ME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  206 (390)
T ss_dssp             EE-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred             Ee-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence            99 6788999998653   35889999999999999999999988   99999999999995 58999999999987654


Q ss_pred             cccccccccccccCCccChhhhcc-----------CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHh
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMS-----------GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLL  653 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~  653 (752)
                      ...........||+.|+|||++.+           ..++.++|||||||+||||++|+.||.....     ........+
T Consensus       207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~~~~~~  281 (390)
T 2zmd_A          207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAII  281 (390)
T ss_dssp             -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----HHHHHHHHH
T ss_pred             CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-----HHHHHHHHh
Confidence            433333345679999999999875           4689999999999999999999999965431     112222222


Q ss_pred             hCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          654 SDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       654 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .....         ...+......+.+|+.+||+.||.+|||+.|++++
T Consensus       282 ~~~~~---------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          282 DPNHE---------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             CTTSC---------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             Ccccc---------CCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            21111         11111112356788999999999999999999876


No 102
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=2.4e-38  Score=340.53  Aligned_cols=255  Identities=22%  Similarity=0.317  Sum_probs=202.1

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCeeEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  504 (752)
                      ++|++.+.||+|+||.||+++.. +++.||+|++....   ......+.+|..++.++ +||||+++++++.+.+..++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            56888899999999999999975 57899999997653   23345678999999988 899999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||+++|+|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus        89 ~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~  162 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  162 (345)
T ss_dssp             ECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred             EeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence            9999999999998653   35899999999999999999999998   99999999999999999999999999985322


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC--cchHHHHHHHhhCCCccccc
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRP--LNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~  662 (752)
                      ..  .......||+.|+|||++.+..++.++|||||||++|||++|+.||........  ........+.+..+..    
T Consensus       163 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~----  236 (345)
T 3a8x_A          163 PG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----  236 (345)
T ss_dssp             TT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC----
T ss_pred             CC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC----
Confidence            21  223346899999999999999999999999999999999999999975322111  0111122222222211    


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCH------HHHHHH
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTM------PEVVCM  702 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~------~ev~~~  702 (752)
                        .+    +......+.+++.+||+.||.+||++      .|++++
T Consensus       237 --~~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h  276 (345)
T 3a8x_A          237 --RI----PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  276 (345)
T ss_dssp             --CC----CTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred             --CC----CCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence              11    11122356788999999999999996      566654


No 103
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=1.4e-38  Score=343.61  Aligned_cols=255  Identities=22%  Similarity=0.274  Sum_probs=203.9

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccC-----CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRS-----SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERL  502 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  502 (752)
                      .++|++.+.||+|+||.||++... +++.||||++...     .....+.+.+|+.++.+++||||+++++++.+++..+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            357889999999999999999864 5899999998532     2234678999999999999999999999999999999


Q ss_pred             EEEeeCCCCCHhHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCC---ceeccccc
Q 043278          503 LVYEFMPNKSLDFFLFNSG-RKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMN---PKISDFGM  578 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~---~kl~DFgl  578 (752)
                      +||||+++++|.+++.... ....+++..+..++.||+.||+|||+++   |+||||||+|||++.++.   +||+|||+
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            9999999999988775432 3345899999999999999999999998   999999999999986655   99999999


Q ss_pred             ceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCc
Q 043278          579 ARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKG  658 (752)
Q Consensus       579 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  658 (752)
                      ++.......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....        .....+..+..
T Consensus       180 a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~i~~~~~  249 (351)
T 3c0i_A          180 AIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--------RLFEGIIKGKY  249 (351)
T ss_dssp             CEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--------HHHHHHHHTCC
T ss_pred             eeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--------HHHHHHHcCCC
Confidence            987654321  22345799999999999999999999999999999999999999975321        11111111111


Q ss_pred             ccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          659 LELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       659 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .  ..+....    .....+.+++.+||+.||++|||+.|++++
T Consensus       250 ~--~~~~~~~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          250 K--MNPRQWS----HISESAKDLVRRMLMLDPAERITVYEALNH  287 (351)
T ss_dssp             C--CCHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             C--CCccccc----cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            0  0000000    112457789999999999999999999874


No 104
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=5.3e-39  Score=343.81  Aligned_cols=246  Identities=22%  Similarity=0.324  Sum_probs=200.7

Q ss_pred             cCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ++|.+.+.||+|+||.||+|.. .+++.||||++....   ......+.+|+.+++.++||||+++++++...+..++||
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5788899999999999999996 568899999986431   223457899999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      ||+ +|+|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||++......
T Consensus        89 E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~  161 (336)
T 3h4j_B           89 EYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG  161 (336)
T ss_dssp             CCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred             ECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence            999 67888887653   34899999999999999999999998   999999999999999999999999999865432


Q ss_pred             ccccccccccccCCccChhhhccCCC-CccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIV-SIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~-t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      .   ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...........               +...
T Consensus       162 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~---------------i~~~  223 (336)
T 3h4j_B          162 N---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK---------------VNSC  223 (336)
T ss_dssp             B---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC---------------CCSS
T ss_pred             c---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHH---------------HHcC
Confidence            2   2234578999999999988776 7899999999999999999999976543221110               0000


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .  ...+......+.+++.+|++.||.+|||++|+++.
T Consensus       224 ~--~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          224 V--YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             C--CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             C--CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            0  00111122456788999999999999999999875


No 105
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=2.8e-38  Score=340.50  Aligned_cols=245  Identities=22%  Similarity=0.280  Sum_probs=204.1

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ++|.+.+.||+|+||.||+++.. +++.||||++....   ......+.+|+.++.+++||||+++++++.+.+..++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            57888899999999999999875 58899999986532   234567889999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      ||+++|+|.+++...   ..+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.....
T Consensus       121 e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~  194 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             ECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             cCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC
Confidence            999999999999654   34899999999999999999999998   999999999999999999999999999865422


Q ss_pred             ccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCC
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPS  665 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  665 (752)
                           .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....      ... ...+..+..      .
T Consensus       195 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~-~~~i~~~~~------~  256 (350)
T 1rdq_E          195 -----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP------IQI-YEKIVSGKV------R  256 (350)
T ss_dssp             -----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHH-HHHHHHCCC------C
T ss_pred             -----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH------HHH-HHHHHcCCC------C
Confidence                 2346799999999999999999999999999999999999999975431      111 122222211      1


Q ss_pred             CCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 043278          666 LEQPCSANEVMRCIHVGLLCVQDQAMDRPT-----MPEVVCM  702 (752)
Q Consensus       666 l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt-----~~ev~~~  702 (752)
                      +    +......+.+++.+||+.||.+||+     ++|++++
T Consensus       257 ~----p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          257 F----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             C----CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             C----CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence            1    1112245778899999999999998     8888765


No 106
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=4.8e-39  Score=341.35  Aligned_cols=246  Identities=24%  Similarity=0.275  Sum_probs=193.4

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc--ccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG--QGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  504 (752)
                      .++|++.++||+|+||+||+|+.. +++.||||++.....  ....++..|+..+.++ +|+||+++++++.+++..++|
T Consensus        56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv  135 (311)
T 3p1a_A           56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ  135 (311)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence            367999999999999999999976 689999999865432  2333455566666555 999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||+ +++|..++....  ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++.....
T Consensus       136 ~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~  209 (311)
T 3p1a_A          136 TELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGT  209 (311)
T ss_dssp             EECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred             Eecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence            9999 678888876543  45999999999999999999999988   99999999999999999999999999986543


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      ..   ......||+.|+|||++.+ .++.++||||||+++|||++|..++....          .+..+..+.....+. 
T Consensus       210 ~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----------~~~~~~~~~~~~~~~-  274 (311)
T 3p1a_A          210 AG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----------GWQQLRQGYLPPEFT-  274 (311)
T ss_dssp             --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----------HHHHHTTTCCCHHHH-
T ss_pred             CC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----------HHHHHhccCCCcccc-
Confidence            22   2234568999999998876 79999999999999999999977654321          122222222111111 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                         .    .....+.+++.+|++.||++|||+.|++++
T Consensus       275 ---~----~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          275 ---A----GLSSELRSVLVMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             ---T----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ---c----CCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence               1    112457789999999999999999999874


No 107
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=6.8e-40  Score=346.09  Aligned_cols=263  Identities=23%  Similarity=0.319  Sum_probs=190.5

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHh--cCCCCcceeeeeeeeCC----eeE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAK--LQHTNLVRLLGCSLHGE----ERL  502 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~  502 (752)
                      .++|.+.+.||+|+||.||+|+.. ++.||||++...   ....+.+|.+++..  ++||||+++++++....    ..+
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   77 (303)
T 3gxj_A            2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred             cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence            367899999999999999999874 889999998653   34567788888887  79999999999998776    789


Q ss_pred             EEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCcEeecCCCCCcEEecCCCCceec
Q 043278          503 LVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLH--------KYSRLRVIHRDLKASNILLDDKMNPKIS  574 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~iiH~Dikp~NIll~~~~~~kl~  574 (752)
                      +||||+++|+|.+++..    ..+++..++.++.|++.||+|||        +.+   |+||||||+|||++.++.+||+
T Consensus        78 lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~  150 (303)
T 3gxj_A           78 LVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIA  150 (303)
T ss_dssp             EEEECCTTCCHHHHHHH----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BC
T ss_pred             EEEeccCCCCHHHHHhc----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEe
Confidence            99999999999999954    24788899999999999999999        666   9999999999999999999999


Q ss_pred             ccccceeeccccccc--ccccccccCCccChhhhccC------CCCccchhHHHHHHHHHHHhC----------CCCCCC
Q 043278          575 DFGMARIFEVNESEA--NTKRIVGTYGYMSPEYAMSG------IVSIKTDVFSFGVLVLEIVSG----------QKNHTR  636 (752)
Q Consensus       575 DFgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~t~k~DV~S~G~vl~elltG----------~~p~~~  636 (752)
                      |||+++.........  ......||+.|+|||++.+.      .++.++||||||+++|||++|          +.||..
T Consensus       151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~  230 (303)
T 3gxj_A          151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD  230 (303)
T ss_dssp             CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred             ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence            999998665433221  12335789999999999876      455789999999999999999          555544


Q ss_pred             CCCCCCcchHHHHHHHhhCCCcccccCCCCCC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCC
Q 043278          637 HHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQ-PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETM  708 (752)
Q Consensus       637 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~  708 (752)
                      ........  ......+....    ..+.+.. ....+....+.+++.+||+.||.+|||+.||+++|+.+..
T Consensus       231 ~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~  297 (303)
T 3gxj_A          231 LVPSDPSV--EEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             TCC-CCCC--C-CHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred             cCCCCccH--HHHHHHHHHhh----cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence            33221110  00011111111    1111111 1123666788999999999999999999999999998754


No 108
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=5.3e-39  Score=340.98  Aligned_cols=258  Identities=23%  Similarity=0.352  Sum_probs=195.5

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCc---ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCe----
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSG---QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEE----  500 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----  500 (752)
                      .++|++.+.||+|+||.||+++. .+++.||||++.....   .....+.+|+.++.+++||||+++++++.....    
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            36788999999999999999986 5688999999976532   234568899999999999999999999876543    


Q ss_pred             eEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccce
Q 043278          501 RLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMAR  580 (752)
Q Consensus       501 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~  580 (752)
                      .++||||+++++|.+++...   ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~  164 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR  164 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred             cEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence            39999999999999998653   35899999999999999999999998   9999999999999999999999999998


Q ss_pred             eeccccc-ccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcc
Q 043278          581 IFEVNES-EANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGL  659 (752)
Q Consensus       581 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  659 (752)
                      ....... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||.....      ..............
T Consensus       165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~~~  238 (311)
T 3ork_A          165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP------VSVAYQHVREDPIP  238 (311)
T ss_dssp             -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHCCCCC
T ss_pred             cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhcCCCCC
Confidence            7654322 1223346789999999999999999999999999999999999999976542      12222222222111


Q ss_pred             cccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHH-HHhhc
Q 043278          660 ELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVV-CMLQN  705 (752)
Q Consensus       660 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~-~~L~~  705 (752)
                      ..   ....    .....+.+++.+||+.||.+||++.+++ ..|..
T Consensus       239 ~~---~~~~----~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          239 PS---ARHE----GLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             HH---HHST----TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             cc---cccC----CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence            00   0000    1123567889999999999999766654 44544


No 109
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=9.2e-39  Score=343.27  Aligned_cols=250  Identities=23%  Similarity=0.349  Sum_probs=203.1

Q ss_pred             HHhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCee
Q 043278          427 AAANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEER  501 (752)
Q Consensus       427 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  501 (752)
                      ...++|.+.+.||+|+||.||+++.. +++.||||+++...   ......+..|..++..+ +||||+++++++.+.+..
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            34578999999999999999999975 58899999997542   33456678899999887 999999999999999999


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                      ++||||+++|+|..++...   ..+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.
T Consensus        94 ~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~  167 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKE  167 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence            9999999999999998653   34899999999999999999999998   99999999999999999999999999985


Q ss_pred             ecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccc
Q 043278          582 FEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLEL  661 (752)
Q Consensus       582 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  661 (752)
                      .....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||......      . ....+..+.    
T Consensus       168 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~-~~~~i~~~~----  234 (345)
T 1xjd_A          168 NMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE------E-LFHSIRMDN----  234 (345)
T ss_dssp             CCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------H-HHHHHHHCC----
T ss_pred             cccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH------H-HHHHHHhCC----
Confidence            43221  2234568999999999999999999999999999999999999999765421      1 111221111    


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHH-HHHH
Q 043278          662 IDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMP-EVVC  701 (752)
Q Consensus       662 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~-ev~~  701 (752)
                        +.+...    ....+.+++.+|++.||.+||++. |+++
T Consensus       235 --~~~p~~----~s~~~~~li~~lL~~dp~~R~~~~~~i~~  269 (345)
T 1xjd_A          235 --PFYPRW----LEKEAKDLLVKLFVREPEKRLGVRGDIRQ  269 (345)
T ss_dssp             --CCCCTT----SCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             --CCCCcc----cCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence              111111    223567889999999999999997 7654


No 110
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=1.1e-38  Score=339.62  Aligned_cols=265  Identities=23%  Similarity=0.329  Sum_probs=190.1

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      .++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++.+++||||+++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            467889999999999999999864 58899999987543 2334678899999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          507 FMPNKSLDFFLFNSG---RKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      |++ ++|.+++....   ....+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            998 58988886432   2345899999999999999999999998   9999999999999999999999999998754


Q ss_pred             ccccccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCC---cc
Q 043278          584 VNESEANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGK---GL  659 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~  659 (752)
                      ....  ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.......   .............   ..
T Consensus       160 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~  234 (317)
T 2pmi_A          160 IPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE---QLKLIFDIMGTPNESLWP  234 (317)
T ss_dssp             SCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCTTTCG
T ss_pred             CCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChhHhh
Confidence            3221  1223578999999999976 468999999999999999999999997654221   1111111111100   00


Q ss_pred             c-----ccCCCCCC------------CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          660 E-----LIDPSLEQ------------PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       660 ~-----~~d~~l~~------------~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .     ...+.+..            .........+.+++.+||+.||++|||+.|+++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             hhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence            0     00000000            0000112357789999999999999999999874


No 111
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.4e-39  Score=354.29  Aligned_cols=263  Identities=19%  Similarity=0.232  Sum_probs=206.5

Q ss_pred             cHHHHHHHhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeee
Q 043278          421 DFQTIAAAANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSL  496 (752)
Q Consensus       421 ~~~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  496 (752)
                      .++++....++|++.+.||+|+||+||+++.. +++.||||++.+..   ......+.+|..++.+++|+||+++++++.
T Consensus        52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  131 (412)
T 2vd5_A           52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ  131 (412)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            44555556789999999999999999999975 68999999996532   122334789999999999999999999999


Q ss_pred             eCCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceeccc
Q 043278          497 HGEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDF  576 (752)
Q Consensus       497 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DF  576 (752)
                      +.+..+|||||+++|+|..++....  ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++++||+||
T Consensus       132 ~~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DF  206 (412)
T 2vd5_A          132 DENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADF  206 (412)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred             eCCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeec
Confidence            9999999999999999999996532  35899999999999999999999998   999999999999999999999999


Q ss_pred             ccceeecccccccccccccccCCccChhhhc-------cCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHH
Q 043278          577 GMARIFEVNESEANTKRIVGTYGYMSPEYAM-------SGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYA  649 (752)
Q Consensus       577 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~  649 (752)
                      |+++....... ......+||+.|+|||++.       ...++.++|||||||++|||++|+.||.......      ..
T Consensus       207 Gla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~  279 (412)
T 2vd5_A          207 GSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE------TY  279 (412)
T ss_dssp             TTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HH
T ss_pred             hhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH------HH
Confidence            99987643322 1223468999999999987       4578999999999999999999999997654211      11


Q ss_pred             HHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCC---CCHHHHHHH
Q 043278          650 WQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDR---PTMPEVVCM  702 (752)
Q Consensus       650 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~R---Pt~~ev~~~  702 (752)
                      ...+....  .+.-|.....    ....+.+++.+||+ +|.+|   |+++|++++
T Consensus       280 ~~i~~~~~--~~~~p~~~~~----~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          280 GKIVHYKE--HLSLPLVDEG----VPEEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             HHHHTHHH--HCCCC----C----CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             HHHHhccc--CcCCCccccC----CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence            11111000  0001111111    12356788899999 99998   699999876


No 112
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1e-38  Score=342.25  Aligned_cols=257  Identities=27%  Similarity=0.444  Sum_probs=200.5

Q ss_pred             cCCCcCCeeecCCcccEEEEEecC-----CceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLAD-----EQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~-----~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  503 (752)
                      ++|...+.||+|+||.||+|....     +..||||++.... .....++.+|+.++.+++||||+++++++.+.+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            466777999999999999998643     2359999997653 2345578999999999999999999999999999999


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      ||||+++++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus       124 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  198 (333)
T 1mqb_A          124 ITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE  198 (333)
T ss_dssp             EEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             EEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence            99999999999998653  345899999999999999999999998   9999999999999999999999999998765


Q ss_pred             cccccc-ccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccc
Q 043278          584 VNESEA-NTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLEL  661 (752)
Q Consensus       584 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  661 (752)
                      ...... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.....       ......+..+.... 
T Consensus       199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-------~~~~~~~~~~~~~~-  270 (333)
T 1mqb_A          199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-------HEVMKAINDGFRLP-  270 (333)
T ss_dssp             ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTTCCCC-
T ss_pred             cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-------HHHHHHHHCCCcCC-
Confidence            332211 1222345778999999999999999999999999999999 9999865431       11122222221111 


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCC
Q 043278          662 IDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNET  707 (752)
Q Consensus       662 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~  707 (752)
                              .+......+.+++.+||+.||.+||++.|++++|+.+.
T Consensus       271 --------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  308 (333)
T 1mqb_A          271 --------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI  308 (333)
T ss_dssp             --------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             --------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                    11122345778999999999999999999999998753


No 113
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=6.1e-40  Score=349.40  Aligned_cols=259  Identities=25%  Similarity=0.365  Sum_probs=204.2

Q ss_pred             CCcCCeeecCCcccEEEEEec-----CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeC--CeeEE
Q 043278          432 FSTTNKLGEGGFGPVYKGKLA-----DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG--EERLL  503 (752)
Q Consensus       432 ~~~~~~LG~G~fg~Vy~~~~~-----~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  503 (752)
                      |++.++||+|+||.||++...     +++.||||++.... ......+.+|++++++++||||+++++++.+.  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            478899999999999998643     57889999997653 23456789999999999999999999999874  57899


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      ||||+++++|.+++..    ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus       113 v~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  185 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  185 (318)
T ss_dssp             EECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred             EEecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccc
Confidence            9999999999999854    24899999999999999999999998   9999999999999999999999999998765


Q ss_pred             ccccc-cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCC--------CCcchHHHHHHHhh
Q 043278          584 VNESE-ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPD--------RPLNLIGYAWQLLS  654 (752)
Q Consensus       584 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~--------~~~~l~~~~~~~~~  654 (752)
                      ..... .......++..|+|||.+.+..++.++||||||++++||++|+.|+......        ............+.
T Consensus       186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (318)
T 3lxp_A          186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE  265 (318)
T ss_dssp             TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred             ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence            43221 2223456788899999999999999999999999999999999988643210        00000001111222


Q ss_pred             CCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          655 DGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       655 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      .+..         ...+......+.+++.+||+.||.+|||+.|+++.|+.+
T Consensus       266 ~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l  308 (318)
T 3lxp_A          266 RGER---------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV  308 (318)
T ss_dssp             TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccC---------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            2111         111222335678899999999999999999999999876


No 114
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-38  Score=334.51  Aligned_cols=255  Identities=26%  Similarity=0.393  Sum_probs=205.7

Q ss_pred             cCCCcCC-eeecCCcccEEEEEec---CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          430 NNFSTTN-KLGEGGFGPVYKGKLA---DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       430 ~~~~~~~-~LG~G~fg~Vy~~~~~---~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      ++|.+.+ .||+|+||.||+|...   .+..||||+++... .....++.+|+.++.+++||||+++++++ +.+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            3455555 8999999999999853   57789999997653 33456789999999999999999999999 55678999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||+++++|.+++..  ....+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus        88 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  162 (287)
T 1u59_A           88 MEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGA  162 (287)
T ss_dssp             EECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             EEeCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence            999999999999854  3445999999999999999999999998   99999999999999999999999999987654


Q ss_pred             cccc-cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCccccc
Q 043278          585 NESE-ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       585 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  662 (752)
                      .... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......       .....+..+..... 
T Consensus       163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-------~~~~~i~~~~~~~~-  234 (287)
T 1u59_A          163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-------EVMAFIEQGKRMEC-  234 (287)
T ss_dssp             CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-------HHHHHHHTTCCCCC-
T ss_pred             CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-------HHHHHHhcCCcCCC-
Confidence            3322 12223456889999999998899999999999999999999 99999765421       11122222221111 


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                              +......+.+++.+|++.||.+||++.|+++.|+.+
T Consensus       235 --------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  270 (287)
T 1u59_A          235 --------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  270 (287)
T ss_dssp             --------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --------CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                    112234677899999999999999999999999876


No 115
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.9e-38  Score=336.04  Aligned_cols=269  Identities=23%  Similarity=0.337  Sum_probs=203.7

Q ss_pred             HHHHhcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhc--CCCCcceeeeeeeeC----
Q 043278          425 IAAAANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKL--QHTNLVRLLGCSLHG----  498 (752)
Q Consensus       425 i~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----  498 (752)
                      -....++|.+.+.||+|+||.||+|+.. ++.||||++...   ....+..|.+++..+  +|+||+++++++...    
T Consensus        32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~  107 (337)
T 3mdy_A           32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW  107 (337)
T ss_dssp             HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred             ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence            3345678999999999999999999885 889999998643   234455566666554  999999999999887    


Q ss_pred             CeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCcEeecCCCCCcEEecCCCCcee
Q 043278          499 EERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYS-----RLRVIHRDLKASNILLDDKMNPKI  573 (752)
Q Consensus       499 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~iiH~Dikp~NIll~~~~~~kl  573 (752)
                      ...++||||+++|+|.+++..    ..+++..++.++.|++.||+|||+..     ..+|+||||||+|||++.++.+||
T Consensus       108 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl  183 (337)
T 3mdy_A          108 TQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI  183 (337)
T ss_dssp             CEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred             CceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence            688999999999999999954    24899999999999999999999871     113999999999999999999999


Q ss_pred             cccccceeeccccccc--ccccccccCCccChhhhccCCCCcc------chhHHHHHHHHHHHhC----------CCCCC
Q 043278          574 SDFGMARIFEVNESEA--NTKRIVGTYGYMSPEYAMSGIVSIK------TDVFSFGVLVLEIVSG----------QKNHT  635 (752)
Q Consensus       574 ~DFgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~k------~DV~S~G~vl~elltG----------~~p~~  635 (752)
                      +|||+++.........  ......||+.|+|||++.+...+.+      +||||||+++|||++|          +.|+.
T Consensus       184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~  263 (337)
T 3mdy_A          184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH  263 (337)
T ss_dssp             CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred             EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence            9999998764332221  1224578999999999988766665      9999999999999999          55555


Q ss_pred             CCCCCCCcchHHHHHHHhhCCCcccccCCCCCC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCC
Q 043278          636 RHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQ-PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNET  707 (752)
Q Consensus       636 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~  707 (752)
                      ........  ............    ..+.+.. .........+.+++.+||+.||.+|||+.||+++|+.+.
T Consensus       264 ~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~  330 (337)
T 3mdy_A          264 DLVPSDPS--YEDMREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS  330 (337)
T ss_dssp             TTSCSSCC--HHHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhcCCCCc--hhhhHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHH
Confidence            44333222  111112221111    1111111 112256677889999999999999999999999998764


No 116
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.1e-38  Score=346.64  Aligned_cols=269  Identities=20%  Similarity=0.266  Sum_probs=213.3

Q ss_pred             cCCCcCCeeecCCcccEEEEEecC-CceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCC--eeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLAD-EQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGE--ERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~  505 (752)
                      ++|.+.++||+|+||.||+|+... ++.||||++.... ......+.+|++++.+++||||+++++++.+.+  ..++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            578889999999999999998754 8899999997543 344677889999999999999999999988755  679999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEe----cCCCCceeccccccee
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILL----DDKMNPKISDFGMARI  581 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll----~~~~~~kl~DFgla~~  581 (752)
                      ||+++|+|.+++........+++..++.++.||+.||+|||+.+   |+||||||+|||+    +.++.+||+|||+++.
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~  165 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence            99999999999976544445999999999999999999999998   9999999999999    7888899999999987


Q ss_pred             ecccccccccccccccCCccChhhhcc--------CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHh
Q 043278          582 FEVNESEANTKRIVGTYGYMSPEYAMS--------GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLL  653 (752)
Q Consensus       582 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~  653 (752)
                      .....   ......||+.|+|||++.+        ..++.++||||||+++|||++|+.||.........  .......+
T Consensus       166 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~--~~~~~~~~  240 (396)
T 4eut_A          166 LEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN--KEVMYKII  240 (396)
T ss_dssp             CCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC--HHHHHHHH
T ss_pred             ccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch--HHHHHHHh
Confidence            64332   1223578999999999875        56788999999999999999999999765432222  11222222


Q ss_pred             hCCCc---cccc-----------CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          654 SDGKG---LELI-----------DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       654 ~~~~~---~~~~-----------d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      .....   ..+.           +.......+......+.+++.+||+.||++||++.|+++.|+.+
T Consensus       241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i  307 (396)
T 4eut_A          241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (396)
T ss_dssp             HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence            21110   0000           00111234466777888999999999999999999999988764


No 117
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=7e-38  Score=329.48  Aligned_cols=262  Identities=19%  Similarity=0.243  Sum_probs=204.5

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeee-eeCCeeEEEE
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCS-LHGEERLLVY  505 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~  505 (752)
                      ..++|.+.+.||+|+||.||+|+. .+++.||||++......  .++.+|+.++.+++|++++..+..+ .+++..++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            457899999999999999999986 56889999987554322  3578899999999988877777665 6677889999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEe---cCCCCceecccccceee
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILL---DDKMNPKISDFGMARIF  582 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll---~~~~~~kl~DFgla~~~  582 (752)
                      ||+ +++|.+++...  ...+++..+..++.||+.||.|||+.+   |+||||||+|||+   +.++.+||+|||+++..
T Consensus        85 e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             ECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             Ecc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            999 99999998643  235999999999999999999999998   9999999999999   89999999999999876


Q ss_pred             cccccc-----cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCC
Q 043278          583 EVNESE-----ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGK  657 (752)
Q Consensus       583 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  657 (752)
                      ......     .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......................
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  238 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP  238 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch
Confidence            543321     122346789999999999999999999999999999999999999987665544433332222111111


Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          658 GLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       658 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      .. .+.    ...    ...+.+++.+|++.||++|||+.||++.|+.+
T Consensus       239 ~~-~~~----~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~  278 (296)
T 4hgt_A          239 IE-VLC----KGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HH-HHT----TTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             hh-hhh----ccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence            00 000    111    23577899999999999999999999999875


No 118
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=1.6e-38  Score=339.27  Aligned_cols=251  Identities=22%  Similarity=0.238  Sum_probs=181.5

Q ss_pred             CCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcC-CCCcceeeeeeeeCCeeEEEEeeCCCCC
Q 043278          435 TNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQ-HTNLVRLLGCSLHGEERLLVYEFMPNKS  512 (752)
Q Consensus       435 ~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~~gs  512 (752)
                      .+.||+|+||.||++... +++.||||++...   ....+.+|+.++.+++ ||||+++++++.++...++||||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            378999999999999875 5889999999653   4567789999999997 9999999999999999999999999999


Q ss_pred             HhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCC---Cceecccccceeeccccccc
Q 043278          513 LDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKM---NPKISDFGMARIFEVNESEA  589 (752)
Q Consensus       513 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~---~~kl~DFgla~~~~~~~~~~  589 (752)
                      |.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++   .+||+|||+++.......  
T Consensus        93 L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--  164 (325)
T 3kn6_A           93 LFERIKKK---KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--  164 (325)
T ss_dssp             HHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred             HHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--
Confidence            99999653   45999999999999999999999998   99999999999997665   799999999986543221  


Q ss_pred             ccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCCC
Q 043278          590 NTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQP  669 (752)
Q Consensus       590 ~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~  669 (752)
                      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..................+..+...      ....
T Consensus       165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~  238 (325)
T 3kn6_A          165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS------FEGE  238 (325)
T ss_dssp             -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC------CCSH
T ss_pred             cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC------CCcc
Confidence            2234568999999999999999999999999999999999999998765432222222233333332211      0000


Q ss_pred             CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          670 CSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       670 ~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ........+.+++.+|++.||.+|||+.|++++
T Consensus       239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred             cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence            001123457789999999999999999999764


No 119
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=3.6e-38  Score=339.96  Aligned_cols=251  Identities=22%  Similarity=0.321  Sum_probs=189.3

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEF  507 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  507 (752)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++....  ..+.+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  129 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL  129 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence            467889999999999999999986 47889999997643  345678999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC---CCCceecccccceeecc
Q 043278          508 MPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD---KMNPKISDFGMARIFEV  584 (752)
Q Consensus       508 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~---~~~~kl~DFgla~~~~~  584 (752)
                      +++++|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.   ++.+||+|||+++....
T Consensus       130 ~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~  203 (349)
T 2w4o_A          130 VTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH  203 (349)
T ss_dssp             CCSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred             CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence            999999998854   345899999999999999999999998   999999999999975   89999999999986543


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      ..   ......||+.|+|||++.+..++.++|||||||++|||++|+.||......      ......+...... ...+
T Consensus       204 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~i~~~~~~-~~~~  273 (349)
T 2w4o_A          204 QV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD------QFMFRRILNCEYY-FISP  273 (349)
T ss_dssp             ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH------HHHHHHHHTTCCC-CCTT
T ss_pred             cc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc------HHHHHHHHhCCCc-cCCc
Confidence            21   223467899999999999999999999999999999999999999654421      1111222222111 1111


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                           ........+.+++.+|++.||++|||+.|+++.
T Consensus       274 -----~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          274 -----WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             -----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             -----hhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                 111223457789999999999999999999884


No 120
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=3.1e-38  Score=337.48  Aligned_cols=249  Identities=23%  Similarity=0.324  Sum_probs=194.1

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe----cCCceeEEEEcccCC----cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL----ADEQEVAIKRLSRSS----GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEE  500 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  500 (752)
                      .++|++.+.||+|+||.||+++.    .+++.||+|+++...    ......+.+|+.++.+++||||+++++++.+++.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            36788899999999999999987    468899999997642    2334567899999999999999999999999999


Q ss_pred             eEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccce
Q 043278          501 RLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMAR  580 (752)
Q Consensus       501 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~  580 (752)
                      .++||||+++++|.+++...   ..+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~  169 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK  169 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred             EEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCccc
Confidence            99999999999999998653   35889999999999999999999998   9999999999999999999999999997


Q ss_pred             eecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCccc
Q 043278          581 IFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLE  660 (752)
Q Consensus       581 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  660 (752)
                      ......  .......||+.|+|||++.+..++.++||||||+++|||++|+.||......      ........ ...  
T Consensus       170 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~~-~~~--  238 (327)
T 3a62_A          170 ESIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK------KTIDKILK-CKL--  238 (327)
T ss_dssp             -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHH-TCC--
T ss_pred             ccccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHh-CCC--
Confidence            543222  1223467899999999999999999999999999999999999999765421      11112221 111  


Q ss_pred             ccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 043278          661 LIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRP-----TMPEVVCM  702 (752)
Q Consensus       661 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RP-----t~~ev~~~  702 (752)
                          .+    +......+.+++.+||+.||.+||     ++.|++++
T Consensus       239 ----~~----p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          239 ----NL----PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             ----CC----CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             ----CC----CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence                11    111224567889999999999999     77788765


No 121
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=1e-38  Score=347.19  Aligned_cols=247  Identities=26%  Similarity=0.315  Sum_probs=196.6

Q ss_pred             CCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeCCCCCH
Q 043278          435 TNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFMPNKSL  513 (752)
Q Consensus       435 ~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL  513 (752)
                      .+.||+|+||.||+|... +++.||+|++.........++.+|+.++.+++||||+++++++.+.+..+|||||+++++|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            468999999999999864 6889999999876656677899999999999999999999999999999999999999999


Q ss_pred             hHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEe--cCCCCceecccccceeeccccccccc
Q 043278          514 DFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILL--DDKMNPKISDFGMARIFEVNESEANT  591 (752)
Q Consensus       514 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll--~~~~~~kl~DFgla~~~~~~~~~~~~  591 (752)
                      .+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||+  +.++.+||+|||+++.......   .
T Consensus       174 ~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~  245 (373)
T 2x4f_A          174 FDRIIDE--SYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---L  245 (373)
T ss_dssp             HHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---C
T ss_pred             HHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---c
Confidence            9888643  345899999999999999999999998   9999999999999  5678899999999987643322   2


Q ss_pred             ccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCCCCC
Q 043278          592 KRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQPCS  671 (752)
Q Consensus       592 ~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~  671 (752)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......      ...........  .+..+. ..   
T Consensus       246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~------~~~~~i~~~~~--~~~~~~-~~---  313 (373)
T 2x4f_A          246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA------ETLNNILACRW--DLEDEE-FQ---  313 (373)
T ss_dssp             CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTCC--CSCSGG-GT---
T ss_pred             ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhccC--CCChhh-hc---
Confidence            2356899999999999999999999999999999999999999765421      11112221111  000000 01   


Q ss_pred             HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          672 ANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       672 ~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                       .....+.+++.+||+.||.+|||+.|+++.
T Consensus       314 -~~~~~~~~li~~~L~~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          314 -DISEEAKEFISKLLIKEKSWRISASEALKH  343 (373)
T ss_dssp             -TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             -cCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence             112457789999999999999999999884


No 122
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=8.9e-39  Score=341.76  Aligned_cols=259  Identities=31%  Similarity=0.431  Sum_probs=204.5

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe------cCCceeEEEEcccC-CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL------ADEQEVAIKRLSRS-SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEER  501 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~------~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  501 (752)
                      .++|.+.+.||+|+||.||+|+.      .+++.||||++... ......++.+|+.++.+++||||+++++++.+.+..
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            46889999999999999999984      24678999999754 334556789999999999999999999999999999


Q ss_pred             EEEEeeCCCCCHhHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC---CCCceec
Q 043278          502 LLVYEFMPNKSLDFFLFNSGR----KNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD---KMNPKIS  574 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~---~~~~kl~  574 (752)
                      ++||||+++++|.+++.....    ...+++..++.++.||+.||.|||+.+   |+||||||+|||++.   +..+||+
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~  185 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG  185 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEEC
Confidence            999999999999999976432    245899999999999999999999998   999999999999984   4569999


Q ss_pred             ccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHh
Q 043278          575 DFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLL  653 (752)
Q Consensus       575 DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~  653 (752)
                      |||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||......       .....+
T Consensus       186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-------~~~~~~  258 (327)
T 2yfx_A          186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-------EVLEFV  258 (327)
T ss_dssp             CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-------HHHHHH
T ss_pred             ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-------HHHHHH
Confidence            9999986543333233334567889999999999999999999999999999998 88888654311       112222


Q ss_pred             hCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          654 SDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       654 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      ..+....     .    +......+.+++.+||+.||.+|||+.|++++|+..
T Consensus       259 ~~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          259 TSGGRMD-----P----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             HTTCCCC-----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hcCCCCC-----C----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            2222111     1    111224577899999999999999999999999865


No 123
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=1.1e-37  Score=328.07  Aligned_cols=261  Identities=19%  Similarity=0.241  Sum_probs=207.3

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeee-eeCCeeEEEEe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCS-LHGEERLLVYE  506 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~E  506 (752)
                      .++|.+.+.||+|+||.||+|+. .+++.||||++......  .++.+|+.++.+++|++++..+..+ .+++..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            46889999999999999999986 57899999998655432  3688999999999998877666655 56778899999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEe---cCCCCceecccccceeec
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILL---DDKMNPKISDFGMARIFE  583 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll---~~~~~~kl~DFgla~~~~  583 (752)
                      |+ +++|.+++...  ...+++..++.++.||+.||+|||+++   |+||||||+|||+   +.++.+||+|||+++...
T Consensus        86 ~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           86 LL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             ec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            99 89999998643  235999999999999999999999998   9999999999999   588999999999998765


Q ss_pred             cccccc-----ccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCc
Q 043278          584 VNESEA-----NTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKG  658 (752)
Q Consensus       584 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  658 (752)
                      ......     ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........................
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  239 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI  239 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred             ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence            433211     123467899999999999999999999999999999999999999876544433333222221111110


Q ss_pred             ccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          659 LELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       659 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      ..     +....    ...+.+++.+|++.||.+|||+.||++.|+.+
T Consensus       240 ~~-----~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  278 (296)
T 3uzp_A          240 EV-----LCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HH-----HTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             HH-----HHhhC----CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence            00     00111    24577899999999999999999999999875


No 124
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.4e-38  Score=367.81  Aligned_cols=248  Identities=26%  Similarity=0.381  Sum_probs=198.9

Q ss_pred             eeecCCcccEEEEEec---CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeCCCCC
Q 043278          437 KLGEGGFGPVYKGKLA---DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFMPNKS  512 (752)
Q Consensus       437 ~LG~G~fg~Vy~~~~~---~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs  512 (752)
                      .||+|+||.||+|.+.   ++..||||+++... ....++|.+|++++.+++|||||++++++.. +..++||||+++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            7999999999999864   45679999998653 3456789999999999999999999999976 56899999999999


Q ss_pred             HhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccccccc-cc
Q 043278          513 LDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESEA-NT  591 (752)
Q Consensus       513 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~~-~~  591 (752)
                      |.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+||||++++.+||+|||+++......... ..
T Consensus       422 L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~  496 (613)
T 2ozo_A          422 LHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR  496 (613)
T ss_dssp             HHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------
T ss_pred             HHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeec
Confidence            99998543  456999999999999999999999998   9999999999999999999999999998764332211 11


Q ss_pred             ccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCCCC
Q 043278          592 KRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQPC  670 (752)
Q Consensus       592 ~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~  670 (752)
                      ....+++.|+|||++.+..++.++|||||||+||||++ |+.||......+       ....+..+.....         
T Consensus       497 ~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-------~~~~i~~~~~~~~---------  560 (613)
T 2ozo_A          497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-------VMAFIEQGKRMEC---------  560 (613)
T ss_dssp             -----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-------HHHHHHTTCCCCC---------
T ss_pred             cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-------HHHHHHcCCCCCC---------
Confidence            22345689999999999999999999999999999998 999997654221       1223333322211         


Q ss_pred             CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          671 SANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       671 ~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      +......+.+|+.+||+.||++||++.+|++.|+..
T Consensus       561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            112234677899999999999999999999999864


No 125
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=4.9e-39  Score=344.80  Aligned_cols=258  Identities=24%  Similarity=0.278  Sum_probs=189.3

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcC-CCCcceeeeeee--------eC
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQ-HTNLVRLLGCSL--------HG  498 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~~  498 (752)
                      ..+|.+.++||+|+||.||+++.. +++.||||++..........+.+|+.++.++. ||||+++++++.        ..
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            457888999999999999999964 68899999997766666778899999999996 999999999984        34


Q ss_pred             CeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceeccccc
Q 043278          499 EERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGM  578 (752)
Q Consensus       499 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgl  578 (752)
                      ...++||||++ |+|.+++........+++..++.++.||+.||+|||+.+ ++|+||||||+|||++.++.+||+|||+
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  184 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGS  184 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCcc
Confidence            45789999996 789888866444556999999999999999999999875 3599999999999999999999999999


Q ss_pred             ceeeccccccc----------ccccccccCCccChhhh---ccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcch
Q 043278          579 ARIFEVNESEA----------NTKRIVGTYGYMSPEYA---MSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNL  645 (752)
Q Consensus       579 a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l  645 (752)
                      ++.........          ......||+.|+|||++   .+..++.++||||||+++|||++|+.||........   
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~---  261 (337)
T 3ll6_A          185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI---  261 (337)
T ss_dssp             CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred             ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh---
Confidence            98765332111          11134689999999998   567789999999999999999999999965432110   


Q ss_pred             HHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCC
Q 043278          646 IGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNET  707 (752)
Q Consensus       646 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~  707 (752)
                             . .+...        ..........+.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus       262 -------~-~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~  307 (337)
T 3ll6_A          262 -------V-NGKYS--------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA  307 (337)
T ss_dssp             ------------CC--------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -------h-cCccc--------CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                   0 00000        0000111123667889999999999999999999998763


No 126
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=1.6e-38  Score=344.43  Aligned_cols=212  Identities=27%  Similarity=0.365  Sum_probs=182.1

Q ss_pred             ccccccHHHHHHHhcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHHHhcC-----CCCcc
Q 043278          416 ELKIFDFQTIAAAANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQ-----HTNLV  489 (752)
Q Consensus       416 ~~~~~~~~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----h~niv  489 (752)
                      +...|++.+.....++|.+.++||+|+||.||+|+. .+++.||||++... ......+..|+.++.+++     |+||+
T Consensus        21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv   99 (360)
T 3llt_A           21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIV   99 (360)
T ss_dssp             GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred             cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence            344455555555678999999999999999999987 46889999999643 334456788999999996     99999


Q ss_pred             eeeeeeeeCCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC--
Q 043278          490 RLLGCSLHGEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD--  567 (752)
Q Consensus       490 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~--  567 (752)
                      ++++++...+..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.  
T Consensus       100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~  174 (360)
T 3llt_A          100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPY  174 (360)
T ss_dssp             CEEEEEEETTEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTT
T ss_pred             cccceeeECCeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEcccc
Confidence            9999999999999999999 899999986543 235899999999999999999999998   999999999999975  


Q ss_pred             -----------------------CCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHH
Q 043278          568 -----------------------KMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLV  624 (752)
Q Consensus       568 -----------------------~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl  624 (752)
                                             ++.+||+|||+++.....     .....||+.|+|||++.+..++.++|||||||++
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  249 (360)
T 3llt_A          175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVL  249 (360)
T ss_dssp             CCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred             ccccccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHH
Confidence                                   889999999999864322     2346789999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCC
Q 043278          625 LEIVSGQKNHTRHH  638 (752)
Q Consensus       625 ~elltG~~p~~~~~  638 (752)
                      |||++|+.||....
T Consensus       250 ~ell~g~~pf~~~~  263 (360)
T 3llt_A          250 AELYTGSLLFRTHE  263 (360)
T ss_dssp             HHHHHSSCSCCCSS
T ss_pred             HHHHHCCCCCCCCc
Confidence            99999999997654


No 127
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=1.4e-38  Score=332.51  Aligned_cols=255  Identities=25%  Similarity=0.382  Sum_probs=201.6

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecC----CceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLAD----EQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~----~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  503 (752)
                      .++|.+.+.||+|+||.||+|+...    +..||+|.+.... ......+.+|+.++.+++||||+++++++.+ +..++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~   89 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI   89 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence            4678888999999999999998643    2359999997653 3345678999999999999999999999865 45689


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      ||||+++++|.+++....  ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++....
T Consensus        90 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  164 (281)
T 3cc6_A           90 IMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIE  164 (281)
T ss_dssp             EEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred             EEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcccc
Confidence            999999999999996532  35899999999999999999999998   9999999999999999999999999998654


Q ss_pred             ccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCccccc
Q 043278          584 VNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  662 (752)
                      ..... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......   ..    ..+..+..... 
T Consensus       165 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~----~~~~~~~~~~~-  235 (281)
T 3cc6_A          165 DEDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VI----GVLEKGDRLPK-  235 (281)
T ss_dssp             ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HH----HHHHHTCCCCC-
T ss_pred             ccccc-ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HH----HHHhcCCCCCC-
Confidence            33211 1223456789999999999999999999999999999998 999997544221   11    11111111110 


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                              +......+.+++.+|++.||.+|||+.|+++.|+.+
T Consensus       236 --------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  271 (281)
T 3cc6_A          236 --------PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV  271 (281)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --------CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence                    111224577899999999999999999999999864


No 128
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=9.3e-38  Score=335.87  Aligned_cols=265  Identities=23%  Similarity=0.319  Sum_probs=209.3

Q ss_pred             HHHHhcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHh--cCCCCcceeeeeeeeCC---
Q 043278          425 IAAAANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAK--LQHTNLVRLLGCSLHGE---  499 (752)
Q Consensus       425 i~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~---  499 (752)
                      -....++|.+.+.||+|+||.||+|+. .++.||||++...   ....+.+|.+++..  ++||||+++++++....   
T Consensus        37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~  112 (342)
T 1b6c_B           37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW  112 (342)
T ss_dssp             HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred             cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence            345668999999999999999999998 5889999998643   34567889998887  79999999999998776   


Q ss_pred             -eeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCcEeecCCCCCcEEecCCCC
Q 043278          500 -ERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLH--------KYSRLRVIHRDLKASNILLDDKMN  570 (752)
Q Consensus       500 -~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~iiH~Dikp~NIll~~~~~  570 (752)
                       ..++||||+++|+|.+++..    ..+++..++.++.||+.||+|||        +.+   |+||||||+|||++.++.
T Consensus       113 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~  185 (342)
T 1b6c_B          113 TQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGT  185 (342)
T ss_dssp             CCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSC
T ss_pred             ceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCC
Confidence             78999999999999999954    34899999999999999999999        555   999999999999999999


Q ss_pred             ceecccccceeeccccccc--ccccccccCCccChhhhccC------CCCccchhHHHHHHHHHHHhC----------CC
Q 043278          571 PKISDFGMARIFEVNESEA--NTKRIVGTYGYMSPEYAMSG------IVSIKTDVFSFGVLVLEIVSG----------QK  632 (752)
Q Consensus       571 ~kl~DFgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~t~k~DV~S~G~vl~elltG----------~~  632 (752)
                      +||+|||+++.........  ......||+.|+|||.+.+.      .++.++||||||+++|||++|          +.
T Consensus       186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~  265 (342)
T 1b6c_B          186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL  265 (342)
T ss_dssp             EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred             EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence            9999999998765433211  22345789999999998875      344789999999999999999          66


Q ss_pred             CCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCC-CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          633 NHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQ-PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       633 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      ||.........  .......+....    ..+.+.. ....+....+.+++.+||+.||.+|||+.||+++|+.+
T Consensus       266 p~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i  334 (342)
T 1b6c_B          266 PYYDLVPSDPS--VEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  334 (342)
T ss_dssp             TTTTTSCSSCC--HHHHHHHHTTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CccccCcCccc--HHHHHHHHHHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence            77654433221  111222222211    1121111 12345667888999999999999999999999999875


No 129
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1e-38  Score=346.96  Aligned_cols=256  Identities=27%  Similarity=0.393  Sum_probs=193.0

Q ss_pred             CCCcCCeeecCCcccEEEEEec--CC--ceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeee-CCeeEEE
Q 043278          431 NFSTTNKLGEGGFGPVYKGKLA--DE--QEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLH-GEERLLV  504 (752)
Q Consensus       431 ~~~~~~~LG~G~fg~Vy~~~~~--~~--~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv  504 (752)
                      .|...+.||+|+||.||+|+..  ++  ..||||.+.... .....+|.+|+.++.+++||||+++++++.+ ++..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            4566789999999999999863  22  358999987543 3445779999999999999999999998754 4578999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||+++|+|.+++...  ...+++..++.++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++....
T Consensus       170 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~  244 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD  244 (373)
T ss_dssp             EECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeeccccccccc
Confidence            9999999999999543  345889999999999999999999998   99999999999999999999999999986543


Q ss_pred             cccc--cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccc
Q 043278          585 NESE--ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLEL  661 (752)
Q Consensus       585 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  661 (752)
                      ....  .......+++.|+|||.+.+..++.++||||||+++|||++ |.+||.......   ..    ..+..+...  
T Consensus       245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~----~~~~~~~~~--  315 (373)
T 3c1x_A          245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---IT----VYLLQGRRL--  315 (373)
T ss_dssp             -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HH----HHHHTTCCC--
T ss_pred             cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HH----HHHHcCCCC--
Confidence            3211  11223456788999999999999999999999999999999 666776544322   11    112222211  


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCC
Q 043278          662 IDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNET  707 (752)
Q Consensus       662 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~  707 (752)
                      ..+       ......+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus       316 ~~p-------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~  354 (373)
T 3c1x_A          316 LQP-------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  354 (373)
T ss_dssp             CCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            111       112235778999999999999999999999998763


No 130
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=3.7e-38  Score=334.28  Aligned_cols=261  Identities=21%  Similarity=0.341  Sum_probs=198.7

Q ss_pred             cCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ++|.+.+.||+|+||.||+|.. .+++.||||++....   .....++.+|+.++.+++|+||+++++++.+++..++||
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            5788899999999999999986 468899999987532   334567889999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          506 EFMPNKSLDFFLFNS-GRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       506 E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      ||+++++|.+++... .....+++..++.++.||+.||.|||+.+   |+|+||||+|||++.++.+||+|||++.....
T Consensus       112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~  188 (310)
T 2wqm_A          112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  188 (310)
T ss_dssp             ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred             ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence            999999999988642 23456899999999999999999999998   99999999999999999999999999986543


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      ...  ......+++.|+|||.+.+..++.++||||||+++|||++|+.||......    .... ...+.......... 
T Consensus       189 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~-~~~~~~~~~~~~~~-  260 (310)
T 2wqm_A          189 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSL-CKKIEQCDYPPLPS-  260 (310)
T ss_dssp             ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC----HHHH-HHHHHTTCSCCCCT-
T ss_pred             CCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh----HHHH-HHHhhcccCCCCcc-
Confidence            221  122356899999999999999999999999999999999999998654321    1111 12222222211111 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCC
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETM  708 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~  708 (752)
                             ......+.+++.+||+.||.+|||+.||++.|+.+..
T Consensus       261 -------~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~  297 (310)
T 2wqm_A          261 -------DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA  297 (310)
T ss_dssp             -------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -------cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence                   1122357788999999999999999999999988743


No 131
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=3.1e-38  Score=328.79  Aligned_cols=254  Identities=23%  Similarity=0.345  Sum_probs=205.3

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      .++|++.+.||+|+||.||+++.. +++.||||++.... ......+.+|+.++.+++||||+++++++.+++..++|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            367888999999999999999875 68899999986543 2345678999999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNE  586 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~  586 (752)
                      |+++++|.+++..   ...+++..+..++.||+.||+|||+.+   |+|+||||+||+++.++.+||+|||++.......
T Consensus        86 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  159 (276)
T 2yex_A           86 YCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  159 (276)
T ss_dssp             CCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             ecCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence            9999999988843   345899999999999999999999998   9999999999999999999999999998765433


Q ss_pred             cccccccccccCCccChhhhccCCC-CccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCC
Q 043278          587 SEANTKRIVGTYGYMSPEYAMSGIV-SIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPS  665 (752)
Q Consensus       587 ~~~~~~~~~gt~~y~aPE~~~~~~~-t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  665 (752)
                      .........|++.|+|||.+.+..+ +.++||||||++++||++|+.||........  .    ...+......  ..+ 
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~----~~~~~~~~~~--~~~-  230 (276)
T 2yex_A          160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--E----YSDWKEKKTY--LNP-  230 (276)
T ss_dssp             EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH--H----HHHHHTTCTT--STT-
T ss_pred             chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH--H----HHHhhhcccc--cCc-
Confidence            3333345678999999999987765 7899999999999999999999976543211  1    1111111100  000 


Q ss_pred             CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          666 LEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       666 l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                           .......+.+++.+|++.||.+|||+.|+++.
T Consensus       231 -----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (276)
T 2yex_A          231 -----WKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (276)
T ss_dssp             -----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             -----hhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence                 11122356789999999999999999999874


No 132
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=3.9e-38  Score=339.48  Aligned_cols=249  Identities=22%  Similarity=0.304  Sum_probs=203.1

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecC-CceeEEEEcccC---CcccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCeeEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLAD-EQEVAIKRLSRS---SGQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  503 (752)
                      .++|.+.+.||+|+||.||+++... ++.||||+++..   .......+..|..++..+ +||||+++++++.+.+..++
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            4688999999999999999999764 788999999754   223456788999999988 89999999999999999999


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      ||||+++|+|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++...
T Consensus        99 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~  172 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI  172 (353)
T ss_dssp             EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence            99999999999998653   34899999999999999999999998   9999999999999999999999999998532


Q ss_pred             ccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccC
Q 043278          584 VNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELID  663 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  663 (752)
                      ...  .......||+.|+|||++.+..++.++||||||+++|||++|+.||......      ........ +..     
T Consensus       173 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~-~~~-----  238 (353)
T 2i0e_A          173 WDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIME-HNV-----  238 (353)
T ss_dssp             CTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHH-CCC-----
T ss_pred             cCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH------HHHHHHHh-CCC-----
Confidence            221  2234568999999999999999999999999999999999999999764321      11112222 111     


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHHH
Q 043278          664 PSLEQPCSANEVMRCIHVGLLCVQDQAMDRPT-----MPEVVCM  702 (752)
Q Consensus       664 ~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt-----~~ev~~~  702 (752)
                       .+    +......+.+++.+||+.||.+||+     +.|++++
T Consensus       239 -~~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          239 -AY----PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             -CC----CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             -CC----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence             01    1112245778899999999999995     5777654


No 133
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=4.2e-38  Score=339.04  Aligned_cols=262  Identities=21%  Similarity=0.214  Sum_probs=202.4

Q ss_pred             HHHHhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccC-----CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeC
Q 043278          425 IAAAANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRS-----SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG  498 (752)
Q Consensus       425 i~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  498 (752)
                      +....++|.+.+.||+|+||.||+|... +++.||+|++...     .......+.+|+.++.+++||||+++++++.+.
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            4456788999999999999999999874 5788999998643     234567889999999999999999999999999


Q ss_pred             CeeEEEEeeCCCCCHhHHHhhcC-------------------------------------CCCCCCHHHHHHHHHHHHHH
Q 043278          499 EERLLVYEFMPNKSLDFFLFNSG-------------------------------------RKNVLNWEKRFIIIEGISQG  541 (752)
Q Consensus       499 ~~~~lv~E~~~~gsL~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~~i~~~  541 (752)
                      +..++||||+++|+|.+++....                                     ....+++..+..++.||+.|
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  180 (345)
T 3hko_A          101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA  180 (345)
T ss_dssp             SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence            99999999999999999884210                                     01224577788999999999


Q ss_pred             HHHHHhcCCCcEeecCCCCCcEEecCCC--Cceecccccceeecccccc--cccccccccCCccChhhhcc--CCCCccc
Q 043278          542 LLYLHKYSRLRVIHRDLKASNILLDDKM--NPKISDFGMARIFEVNESE--ANTKRIVGTYGYMSPEYAMS--GIVSIKT  615 (752)
Q Consensus       542 l~~LH~~~~~~iiH~Dikp~NIll~~~~--~~kl~DFgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~t~k~  615 (752)
                      |+|||+.+   |+||||||+|||++.++  .+||+|||+++.+......  .......||+.|+|||.+.+  ..++.++
T Consensus       181 l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  257 (345)
T 3hko_A          181 LHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC  257 (345)
T ss_dssp             HHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred             HHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence            99999998   99999999999998766  8999999999876432211  12234678999999999975  6789999


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 043278          616 DVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPT  695 (752)
Q Consensus       616 DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt  695 (752)
                      ||||||+++|||++|+.||......      ............  ...+.     .......+.+++.+|++.||.+|||
T Consensus       258 DiwslG~il~el~~g~~pf~~~~~~------~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rps  324 (345)
T 3hko_A          258 DAWSAGVLLHLLLMGAVPFPGVNDA------DTISQVLNKKLC--FENPN-----YNVLSPLARDLLSNLLNRNVDERFD  324 (345)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCC--TTSGG-----GGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcccc--cCCcc-----cccCCHHHHHHHHHHcCCChhHCCC
Confidence            9999999999999999999655421      112222222111  00111     1112245778999999999999999


Q ss_pred             HHHHHHH
Q 043278          696 MPEVVCM  702 (752)
Q Consensus       696 ~~ev~~~  702 (752)
                      +.|+++.
T Consensus       325 ~~~~l~h  331 (345)
T 3hko_A          325 AMRALQH  331 (345)
T ss_dssp             HHHHHHS
T ss_pred             HHHHhcC
Confidence            9999885


No 134
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=6.5e-38  Score=327.63  Aligned_cols=251  Identities=27%  Similarity=0.382  Sum_probs=204.3

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeee---------
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLH---------  497 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------  497 (752)
                      ..++|++.+.||+|+||.||+++.. +++.||+|++....    ..+.+|++++.+++||||+++++++..         
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            3467889999999999999999975 68999999997653    346789999999999999999998754         


Q ss_pred             -------CCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCC
Q 043278          498 -------GEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMN  570 (752)
Q Consensus       498 -------~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~  570 (752)
                             ....++||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+   |+|+||||+|||+++++.
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~  160 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQ  160 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTE
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCC
Confidence                   445799999999999999996532 346899999999999999999999998   999999999999999999


Q ss_pred             ceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHH
Q 043278          571 PKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAW  650 (752)
Q Consensus       571 ~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~  650 (752)
                      +||+|||++.......   ......+++.|+|||.+.+..++.++||||||+++|||++|..|+...         ....
T Consensus       161 ~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---------~~~~  228 (284)
T 2a19_B          161 VKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET---------SKFF  228 (284)
T ss_dssp             EEECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH---------HHHH
T ss_pred             EEECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH---------HHHH
Confidence            9999999998765332   122356899999999999999999999999999999999998775321         1112


Q ss_pred             HHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCCCC
Q 043278          651 QLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETMPL  710 (752)
Q Consensus       651 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~~  710 (752)
                      ..+..+...        ...+    ..+.+++.+|++.||.+|||+.|++++|+.....+
T Consensus       229 ~~~~~~~~~--------~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~  276 (284)
T 2a19_B          229 TDLRDGIIS--------DIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP  276 (284)
T ss_dssp             HHHHTTCCC--------TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred             HHhhccccc--------ccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence            222222211        1112    34668889999999999999999999998875533


No 135
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=2.6e-38  Score=335.14  Aligned_cols=264  Identities=23%  Similarity=0.329  Sum_probs=198.5

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCC-----cccHHHHHHHHHHHHhcC---CCCcceeeeeeeeC
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSS-----GQGIVEFKNEVRLIAKLQ---HTNLVRLLGCSLHG  498 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~  498 (752)
                      ..++|++.++||+|+||+||+|+. .+++.||||++....     ......+.+|+.++.+++   ||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            467899999999999999999996 468899999986432     112345677777777764   99999999999775


Q ss_pred             C-----eeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCcee
Q 043278          499 E-----ERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKI  573 (752)
Q Consensus       499 ~-----~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl  573 (752)
                      .     ..++||||++ ++|.+++.... ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl  161 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKL  161 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEE
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEE
Confidence            5     5789999997 59988886543 334999999999999999999999998   999999999999999999999


Q ss_pred             cccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHh
Q 043278          574 SDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLL  653 (752)
Q Consensus       574 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~  653 (752)
                      +|||+++.....   .......||+.|+|||++.+..++.++||||||+++|||++|+.||.......   .........
T Consensus       162 ~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~  235 (308)
T 3g33_A          162 ADFGLARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD---QLGKIFDLI  235 (308)
T ss_dssp             CSCSCTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH---HHHHHHHHH
T ss_pred             eeCccccccCCC---cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHh
Confidence            999999865422   22234678999999999999999999999999999999999999997654221   111111111


Q ss_pred             hCCCcccc------cCCCC--CCCCCH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          654 SDGKGLEL------IDPSL--EQPCSA-----NEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       654 ~~~~~~~~------~d~~l--~~~~~~-----~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ........      ....+  ....+.     +....+.+++.+|++.||++|||+.|++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          236 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             CCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence            11100000      00000  000011     122467789999999999999999999874


No 136
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=8.9e-39  Score=331.68  Aligned_cols=253  Identities=18%  Similarity=0.313  Sum_probs=203.5

Q ss_pred             cCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeC--CeeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG--EERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~  505 (752)
                      ++|.+.+.||+|+||.||+|+.. ++.||||++....  ....+++.+|+.++.+++||||+++++++.+.  ...++||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            57888899999999999999984 7889999997653  33456789999999999999999999999877  7789999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      ||+++|+|.+++... ....+++..++.++.||+.||+|||+.+ .+|+||||||+|||++.++.++|+|||++....  
T Consensus        89 e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~--  164 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQ--  164 (271)
T ss_dssp             ECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS--
T ss_pred             cccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeec--
Confidence            999999999999653 2335899999999999999999999864 359999999999999999999999998875322  


Q ss_pred             ccccccccccccCCccChhhhccCCCCc---cchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCccccc
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIVSI---KTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~---k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  662 (752)
                           .....+|+.|+|||.+.+...+.   ++||||||+++|||++|+.||.....      ..........+...   
T Consensus       165 -----~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~~---  230 (271)
T 3kmu_A          165 -----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN------MEIGMKVALEGLRP---  230 (271)
T ss_dssp             -----CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH------HHHHHHHHHSCCCC---
T ss_pred             -----ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh------HHHHHHHHhcCCCC---
Confidence                 12356789999999998765544   89999999999999999999975431      11112222222111   


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCC
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNET  707 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~  707 (752)
                        .+..    .....+.+++..|++.||++|||+.|+++.|+.+.
T Consensus       231 --~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          231 --TIPP----GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             --CCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             --CCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence              1111    12345778899999999999999999999998753


No 137
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=3.5e-38  Score=342.55  Aligned_cols=252  Identities=15%  Similarity=0.151  Sum_probs=203.9

Q ss_pred             HhcCCCcCCeeecCCcccEEEEE------ecCCceeEEEEcccCCcccHHHHHHHHHHHHhcC---CCCcceeeeeeeeC
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGK------LADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQ---HTNLVRLLGCSLHG  498 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~------~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~  498 (752)
                      ..++|.+.++||+|+||.||+|.      ...++.||||++...   ...++..|+.++.+++   |+||+++++++...
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~  139 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ  139 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence            34678889999999999999994      456889999999754   3457788888888886   89999999999999


Q ss_pred             CeeEEEEeeCCCCCHhHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC---------
Q 043278          499 EERLLVYEFMPNKSLDFFLFNSG--RKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD---------  567 (752)
Q Consensus       499 ~~~~lv~E~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~---------  567 (752)
                      +..+|||||+++|+|.+++....  ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.         
T Consensus       140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~  216 (365)
T 3e7e_A          140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDED  216 (365)
T ss_dssp             SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC----
T ss_pred             CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccc
Confidence            99999999999999999996532  3456999999999999999999999988   999999999999998         


Q ss_pred             --CCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcch
Q 043278          568 --KMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNL  645 (752)
Q Consensus       568 --~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l  645 (752)
                        ++.+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.......    
T Consensus       217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----  292 (365)
T 3e7e_A          217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----  292 (365)
T ss_dssp             --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE----
T ss_pred             cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc----
Confidence              89999999999987653333333345679999999999999999999999999999999999999985443211    


Q ss_pred             HHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHhhcC
Q 043278          646 IGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDR-PTMPEVVCMLQNE  706 (752)
Q Consensus       646 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~R-Pt~~ev~~~L~~~  706 (752)
                                    ..+...+.....   ...+.+++..|++.+|.+| |+++++.+.|+..
T Consensus       293 --------------~~~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~  337 (365)
T 3e7e_A          293 --------------CKPEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV  337 (365)
T ss_dssp             --------------EEECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred             --------------eeechhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence                          001111111112   2345567789999999998 6888888888764


No 138
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=1.4e-37  Score=324.17  Aligned_cols=252  Identities=21%  Similarity=0.261  Sum_probs=204.9

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEecC-CceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLAD-EQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      ..++|.+.+.||+|+||.||+|.... +..||+|++..........+.+|++++.+++||||+++++++.+++..++|||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME   86 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence            34678999999999999999998754 67899999987766677889999999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEe---cCCCCceecccccceeec
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILL---DDKMNPKISDFGMARIFE  583 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll---~~~~~~kl~DFgla~~~~  583 (752)
                      |+++++|.+++...   ..+++..+..++.|++.||+|||+.+   |+||||||+|||+   +.++.+||+|||++....
T Consensus        87 ~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~  160 (277)
T 3f3z_A           87 LCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK  160 (277)
T ss_dssp             CCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             ccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence            99999999988653   34899999999999999999999998   9999999999999   888999999999998754


Q ss_pred             ccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccC
Q 043278          584 VNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELID  663 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  663 (752)
                      ...   ......||+.|+|||.+.+. ++.++||||||++++||++|+.||......       .....+..+.... ..
T Consensus       161 ~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~-~~  228 (277)
T 3f3z_A          161 PGK---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS-------EVMLKIREGTFTF-PE  228 (277)
T ss_dssp             TTS---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCCC-CH
T ss_pred             Ccc---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhCCCCC-Cc
Confidence            332   22345789999999988654 899999999999999999999999764321       1111222211100 00


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          664 PSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       664 ~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .. ..    .....+.+++.+|++.||.+|||+.|+++.
T Consensus       229 ~~-~~----~~~~~~~~li~~~l~~dp~~R~s~~~~l~h  262 (277)
T 3f3z_A          229 KD-WL----NVSPQAESLIRRLLTKSPKQRITSLQALEH  262 (277)
T ss_dssp             HH-HT----TSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             hh-hh----cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            00 00    112457789999999999999999999864


No 139
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.4e-38  Score=337.62  Aligned_cols=263  Identities=25%  Similarity=0.305  Sum_probs=198.8

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc--ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG--QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      ++|.+.++||+|+||.||+|+.. +++.||||++.....  .....+.+|+.++.+++||||+++++++.+.+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            57888999999999999999975 488999999865532  234567899999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNE  586 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~  586 (752)
                      |+++++|..++..   ...+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++......
T Consensus        83 ~~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  156 (311)
T 4agu_A           83 YCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS  156 (311)
T ss_dssp             CCSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             eCCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence            9999999888753   345899999999999999999999998   9999999999999999999999999998754322


Q ss_pred             cccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHH--------HHHhhCCC
Q 043278          587 SEANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYA--------WQLLSDGK  657 (752)
Q Consensus       587 ~~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~--------~~~~~~~~  657 (752)
                      .  ......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||...........+...        ........
T Consensus       157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (311)
T 4agu_A          157 D--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ  234 (311)
T ss_dssp             -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred             c--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence            1  1223578999999999876 67899999999999999999999999765432211111000        00011110


Q ss_pred             c---ccccCCCCCCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          658 G---LELIDPSLEQPCS-----ANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       658 ~---~~~~d~~l~~~~~-----~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .   ..+.++.  ...+     ......+.+++.+|++.||.+|||++|++++
T Consensus       235 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          235 YFSGVKIPDPE--DMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             GGTTCCCCCCS--SCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             ccccCcCCCcc--ccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            0   0011110  0001     1122357789999999999999999999875


No 140
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=1.6e-38  Score=337.92  Aligned_cols=261  Identities=21%  Similarity=0.272  Sum_probs=199.7

Q ss_pred             cCCCcC-CeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCeeEEEEe
Q 043278          430 NNFSTT-NKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       430 ~~~~~~-~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      +.|.+. +.||+|+||.||+++. .+++.||||++..........+.+|+.++.++ +||||+++++++.+++..++|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            466664 7899999999999985 46889999999877666778899999999985 79999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCC---ceecccccceeec
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMN---PKISDFGMARIFE  583 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~---~kl~DFgla~~~~  583 (752)
                      |+++++|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.   +||+|||++....
T Consensus        92 ~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~  165 (316)
T 2ac3_A           92 KMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK  165 (316)
T ss_dssp             CCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred             cCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence            99999999998653   35899999999999999999999998   999999999999988776   9999999998654


Q ss_pred             cccc-----ccccccccccCCccChhhhcc-----CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcch--------
Q 043278          584 VNES-----EANTKRIVGTYGYMSPEYAMS-----GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNL--------  645 (752)
Q Consensus       584 ~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l--------  645 (752)
                      ....     ........||+.|+|||++..     ..++.++||||||+++|||++|+.||...........        
T Consensus       166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  245 (316)
T 2ac3_A          166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC  245 (316)
T ss_dssp             ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHH
T ss_pred             cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhH
Confidence            2211     111223568999999999875     5688999999999999999999999987654321110        


Q ss_pred             HHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          646 IGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       646 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .......+..+... +..... .    .....+.+++.+|++.||.+|||+.|++++
T Consensus       246 ~~~~~~~i~~~~~~-~~~~~~-~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          246 QNMLFESIQEGKYE-FPDKDW-A----HISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHHHHHHHHHCCCC-CCHHHH-T----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHhccCcc-cCchhc-c----cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            01111222222110 000000 0    112457789999999999999999999985


No 141
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=2.3e-38  Score=339.73  Aligned_cols=264  Identities=26%  Similarity=0.347  Sum_probs=196.0

Q ss_pred             cCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHH--HHhcCCCCcceeeeeee-----eCCeeE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRL--IAKLQHTNLVRLLGCSL-----HGEERL  502 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~-----~~~~~~  502 (752)
                      ++|++.+.||+|+||.||+|+. +++.||||++....   ...+..|.++  +..++|+||+++++.+.     .....+
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~   88 (336)
T 3g2f_A           13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL   88 (336)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred             HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence            5788899999999999999987 67899999986542   3344445444  44589999999998543     233678


Q ss_pred             EEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------CCCcEeecCCCCCcEEecCCCCcee
Q 043278          503 LVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKY---------SRLRVIHRDLKASNILLDDKMNPKI  573 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---------~~~~iiH~Dikp~NIll~~~~~~kl  573 (752)
                      +||||+++|+|.+++...    ..++..+..++.||++||+|||+.         +   |+||||||+|||++.++.+||
T Consensus        89 lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL  161 (336)
T 3g2f_A           89 LVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVI  161 (336)
T ss_dssp             EEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEE
T ss_pred             EEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEE
Confidence            999999999999999542    358999999999999999999998         6   999999999999999999999


Q ss_pred             cccccceeeccccc------ccccccccccCCccChhhhcc-------CCCCccchhHHHHHHHHHHHhCCCCCCCCCCC
Q 043278          574 SDFGMARIFEVNES------EANTKRIVGTYGYMSPEYAMS-------GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPD  640 (752)
Q Consensus       574 ~DFgla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~  640 (752)
                      +|||+++.+.....      ........||+.|+|||++.+       ..++.++||||||+++|||++|+.|+......
T Consensus       162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~  241 (336)
T 3g2f_A          162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV  241 (336)
T ss_dssp             CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred             eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence            99999987653321      111224578999999999987       45678999999999999999997776443322


Q ss_pred             CCcc-hH----------HHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          641 RPLN-LI----------GYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       641 ~~~~-l~----------~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      .... ..          ...............+...  ..........+.+++.+||+.||++|||++|+++.|+.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l  316 (336)
T 3g2f_A          242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEA--WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL  316 (336)
T ss_dssp             CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTT--CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcc--cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence            2111 00          0111111111111111111  112334556788999999999999999999999999876


No 142
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=3e-38  Score=332.87  Aligned_cols=257  Identities=27%  Similarity=0.381  Sum_probs=199.9

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCC----ceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeee-eCCeeE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADE----QEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSL-HGEERL  502 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~----~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~  502 (752)
                      ..+|.+.+.||+|+||.||+|+..+.    ..+|+|.+.... .....++.+|+.++++++||||+++++++. .++..+
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  103 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  103 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence            35677889999999999999986432    258999987643 334567899999999999999999999865 456789


Q ss_pred             EEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceee
Q 043278          503 LVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIF  582 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~  582 (752)
                      +||||+++++|.+++..  ....+++..++.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus       104 ~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~  178 (298)
T 3f66_A          104 VVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM  178 (298)
T ss_dssp             EEEECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred             EEEeCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccc
Confidence            99999999999999964  3345899999999999999999999998   999999999999999999999999999876


Q ss_pred             cccccc--cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhC-CCCCCCCCCCCCcchHHHHHHHhhCCCcc
Q 043278          583 EVNESE--ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSG-QKNHTRHHPDRPLNLIGYAWQLLSDGKGL  659 (752)
Q Consensus       583 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  659 (752)
                      ......  .......+|+.|+|||.+.+..++.++||||||++++||++| .+|+.......   ..    .....+...
T Consensus       179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~----~~~~~~~~~  251 (298)
T 3f66_A          179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---IT----VYLLQGRRL  251 (298)
T ss_dssp             SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HH----HHHHTTCCC
T ss_pred             cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HH----HHHhcCCCC
Confidence            433221  122335677899999999999999999999999999999995 45554433221   11    111111111


Q ss_pred             cccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          660 ELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       660 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                        ..+       ......+.+++.+|++.||.+|||+.|+++.|+.+
T Consensus       252 --~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  289 (298)
T 3f66_A          252 --LQP-------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  289 (298)
T ss_dssp             --CCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCC-------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence              111       11123577899999999999999999999999875


No 143
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=7.4e-38  Score=325.95  Aligned_cols=246  Identities=22%  Similarity=0.346  Sum_probs=179.6

Q ss_pred             cCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ++|++.+.||+|+||.||+++. .+++.||+|++....   ......+.+|+.++++++||||+++++++.+.+..++||
T Consensus        13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (275)
T 2eue_A           13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence            5799999999999999999986 468899999987542   334567899999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      ||+ +++|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||++......
T Consensus        93 e~~-~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  165 (275)
T 2eue_A           93 EYA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG  165 (275)
T ss_dssp             ECC-CEEHHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred             hhc-CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence            999 5677676644   345899999999999999999999998   999999999999999999999999999865432


Q ss_pred             ccccccccccccCCccChhhhccCCC-CccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIV-SIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~-t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      ..   .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||.....       .........+..      
T Consensus       166 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~------  229 (275)
T 2eue_A          166 NF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-------PVLFKNISNGVY------  229 (275)
T ss_dssp             ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCC------
T ss_pred             cc---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCC------
Confidence            21   223568999999999988765 7899999999999999999999975431       111122222111      


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .+    +......+.+++.+|++.||.+|||+.|++++
T Consensus       230 ~~----~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  263 (275)
T 2eue_A          230 TL----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             CC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             CC----CccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence            01    11122346789999999999999999999764


No 144
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=7.9e-38  Score=349.37  Aligned_cols=247  Identities=25%  Similarity=0.395  Sum_probs=204.0

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ++|.+.+.||+|+||.||+|+.. +|+.||||++....   ......+.+|+.+++.++||||+++++++...+..++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            57888899999999999999875 68999999996542   234567899999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      ||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus        96 E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~  169 (476)
T 2y94_A           96 EYVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  169 (476)
T ss_dssp             ECCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence            99999999999853   345999999999999999999999998   999999999999999999999999999876432


Q ss_pred             ccccccccccccCCccChhhhccCCC-CccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIV-SIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~-t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      .   ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||......      . ....+..+...   .+
T Consensus       170 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~------~-~~~~i~~~~~~---~p  236 (476)
T 2y94_A          170 E---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP------T-LFKKICDGIFY---TP  236 (476)
T ss_dssp             C---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH------H-HHHHHHTTCCC---CC
T ss_pred             c---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH------H-HHHHHhcCCcC---CC
Confidence            2   2234579999999999988765 78999999999999999999999754421      1 11222222110   01


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                         ..    ....+.+++.+||+.||.+|||+.|++++
T Consensus       237 ---~~----~s~~~~~Li~~~L~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          237 ---QY----LNPSVISLLKHMLQVDPMKRATIKDIREH  267 (476)
T ss_dssp             ---TT----CCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             ---cc----CCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence               11    12356788999999999999999999874


No 145
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=1e-38  Score=335.32  Aligned_cols=255  Identities=27%  Similarity=0.368  Sum_probs=202.5

Q ss_pred             hcCCCcCC-eeecCCcccEEEEEe---cCCceeEEEEcccCCc--ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeE
Q 043278          429 ANNFSTTN-KLGEGGFGPVYKGKL---ADEQEVAIKRLSRSSG--QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERL  502 (752)
Q Consensus       429 ~~~~~~~~-~LG~G~fg~Vy~~~~---~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  502 (752)
                      .++|.+.+ .||+|+||.||+|..   ..++.||||++.....  ...+++.+|+.++.+++||||+++++++ +.+..+
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~   93 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM   93 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence            35666667 999999999999964   2467899999976532  2356789999999999999999999999 567789


Q ss_pred             EEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceee
Q 043278          503 LVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIF  582 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~  582 (752)
                      +||||+++++|.+++...   ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        94 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  167 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL  167 (291)
T ss_dssp             EEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence            999999999999999653   34899999999999999999999998   999999999999999999999999999876


Q ss_pred             ccccccc-ccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCccc
Q 043278          583 EVNESEA-NTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLE  660 (752)
Q Consensus       583 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  660 (752)
                      ....... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......       .....+..+....
T Consensus       168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~~~~  240 (291)
T 1xbb_A          168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-------EVTAMLEKGERMG  240 (291)
T ss_dssp             CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTTCCCC
T ss_pred             ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-------HHHHHHHcCCCCC
Confidence            5433221 1222346788999999999899999999999999999999 99998765421       1222233322211


Q ss_pred             ccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          661 LIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       661 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      .         +......+.+++.+|++.||.+|||+.|+++.|+.+
T Consensus       241 ~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  277 (291)
T 1xbb_A          241 C---------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  277 (291)
T ss_dssp             C---------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             C---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            1         112234577899999999999999999999999875


No 146
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.6e-38  Score=332.14  Aligned_cols=256  Identities=27%  Similarity=0.368  Sum_probs=201.5

Q ss_pred             CCCcCCeeecCCcccEEEEEecC-C---ceeEEEEcccCCc-ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCee-EEE
Q 043278          431 NFSTTNKLGEGGFGPVYKGKLAD-E---QEVAIKRLSRSSG-QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEER-LLV  504 (752)
Q Consensus       431 ~~~~~~~LG~G~fg~Vy~~~~~~-~---~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv  504 (752)
                      .|...++||+|+||.||+|...+ +   ..+|+|.+..... ...+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            34556899999999999998643 2   3699999876433 3456789999999999999999999999876655 999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||+.+++|.+++..  ....+++..++.++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+++....
T Consensus       102 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  176 (298)
T 3pls_A          102 LPYMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILD  176 (298)
T ss_dssp             ECCCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred             EecccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence            999999999999965  2345899999999999999999999998   99999999999999999999999999986543


Q ss_pred             cc--cccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCccccc
Q 043278          585 NE--SEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       585 ~~--~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  662 (752)
                      ..  .........+++.|+|||.+.+..++.++||||||+++|||++|..|+......  ....    .....+....  
T Consensus       177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~--~~~~----~~~~~~~~~~--  248 (298)
T 3pls_A          177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP--FDLT----HFLAQGRRLP--  248 (298)
T ss_dssp             GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG--GGHH----HHHHTTCCCC--
T ss_pred             CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH--HHHH----HHhhcCCCCC--
Confidence            32  112223456788999999999999999999999999999999966654433211  1111    1122221111  


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                             .+......+.+++.+|++.||.+|||+.|+++.|+.+
T Consensus       249 -------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~  285 (298)
T 3pls_A          249 -------QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI  285 (298)
T ss_dssp             -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -------CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                   0111224577899999999999999999999999875


No 147
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=3.9e-38  Score=328.52  Aligned_cols=250  Identities=26%  Similarity=0.414  Sum_probs=183.5

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      .++|.+.+.||+|+||.||+|+. .+++.||||++....   ......+.+|+.++.+++||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            35788889999999999999987 468899999986432   23356789999999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||+++++|.+++...  ...+++..+..++.||+.||+|||+.+   |+|+||||+||+++.++.+||+|||++.....
T Consensus        90 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  164 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKM  164 (278)
T ss_dssp             EECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred             EecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence            9999999999998643  346899999999999999999999998   99999999999999999999999999987543


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      ...  ......|++.|+|||.+.+..++.++||||||++++||++|+.||..........       .....      +.
T Consensus       165 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-------~~~~~------~~  229 (278)
T 3cok_A          165 PHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN-------KVVLA------DY  229 (278)
T ss_dssp             -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------CCSS------CC
T ss_pred             CCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH-------HHhhc------cc
Confidence            221  1223568999999999999999999999999999999999999997654332110       00000      11


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ..    +......+.+++.+|++.||++|||+.|+++.
T Consensus       230 ~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  263 (278)
T 3cok_A          230 EM----PSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH  263 (278)
T ss_dssp             CC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             CC----ccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence            11    11122356789999999999999999999873


No 148
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=5.7e-38  Score=338.08  Aligned_cols=248  Identities=30%  Similarity=0.409  Sum_probs=199.7

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCc---ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSG---QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      .+.|+..+.||+|+||.||+|+. .+++.||||++.....   ....++.+|++++.+++||||+++++++.+++..++|
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  132 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV  132 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence            35688889999999999999986 5688999999975432   2345688999999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||++ |+|.+++...  ...+++..+..++.||++||+|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus       133 ~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~  206 (348)
T 1u5q_A          133 MEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  206 (348)
T ss_dssp             EECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             EecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence            99998 6777777543  245899999999999999999999998   99999999999999999999999999986432


Q ss_pred             cccccccccccccCCccChhhhc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccc
Q 043278          585 NESEANTKRIVGTYGYMSPEYAM---SGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLEL  661 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  661 (752)
                      .      ....||+.|+|||++.   ...++.++||||||+++|||++|+.||.....      ........... ....
T Consensus       207 ~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~------~~~~~~~~~~~-~~~~  273 (348)
T 1u5q_A          207 A------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQNE-SPAL  273 (348)
T ss_dssp             B------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSC-CCCC
T ss_pred             C------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHhcC-CCCC
Confidence            1      2357899999999985   57899999999999999999999999865431      11122222221 1111


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 043278          662 IDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCML  703 (752)
Q Consensus       662 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L  703 (752)
                      ..    ..    ....+.+++.+||+.||++|||+.|+++..
T Consensus       274 ~~----~~----~~~~l~~li~~~l~~dP~~Rps~~~ll~h~  307 (348)
T 1u5q_A          274 QS----GH----WSEYFRNFVDSCLQKIPQDRPTSEVLLKHR  307 (348)
T ss_dssp             CC----TT----SCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred             CC----CC----CCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence            11    11    123467888999999999999999998753


No 149
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=6.1e-38  Score=328.04  Aligned_cols=252  Identities=22%  Similarity=0.307  Sum_probs=203.4

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      .++|++.+.||+|+||.||+|... +++.||+|++....  ......+.+|+.++.+++||||+++++++.+++..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            468889999999999999999875 58899999986542  334567889999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCC---ceecccccceee
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMN---PKISDFGMARIF  582 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~---~kl~DFgla~~~  582 (752)
                      ||+++++|.+.+...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.   +||+|||++...
T Consensus        85 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~  158 (284)
T 3kk8_A           85 DLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV  158 (284)
T ss_dssp             CCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             ecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence            999999998888653   35899999999999999999999998   999999999999986655   999999999865


Q ss_pred             cccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCccccc
Q 043278          583 EVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       583 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  662 (752)
                      .....   .....|++.|+|||.+.+..++.++||||||++++||++|+.||......      . .......+... ..
T Consensus       159 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~-~~~~~~~~~~~-~~  227 (284)
T 3kk8_A          159 NDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------R-LYAQIKAGAYD-YP  227 (284)
T ss_dssp             CSSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------H-HHHHHHHTCCC-CC
T ss_pred             ccCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh------H-HHHHHHhcccc-CC
Confidence            43221   22357899999999999999999999999999999999999999654321      1 11112111111 11


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .+.     .......+.+++.+|++.||.+|||+.|++++
T Consensus       228 ~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          228 SPE-----WDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             TTT-----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             chh-----hcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            111     01122356788999999999999999999874


No 150
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=1.5e-37  Score=325.41  Aligned_cols=253  Identities=23%  Similarity=0.331  Sum_probs=198.1

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      .++|.+.++||+|+||.||+++.. ++..+|+|++.... ......+.+|++++.+++||||+++++++.+.+..++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            367888999999999999999874 58899999987653 3456789999999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEe---cCCCCceecccccceee
Q 043278          507 FMPNKSLDFFLFNS-GRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILL---DDKMNPKISDFGMARIF  582 (752)
Q Consensus       507 ~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll---~~~~~~kl~DFgla~~~  582 (752)
                      |+++++|.+++... .....+++..+..++.||+.||+|||+.+   |+||||||+|||+   +.++.+||+|||+++..
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A          101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF  177 (285)
T ss_dssp             CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred             eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence            99999999988643 22356999999999999999999999998   9999999999999   45688999999999865


Q ss_pred             cccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCccccc
Q 043278          583 EVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       583 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  662 (752)
                      ....   ......|++.|+|||.+. ..++.++||||||++++||++|+.||......      ............... 
T Consensus       178 ~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~------~~~~~~~~~~~~~~~-  246 (285)
T 3is5_A          178 KSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE------EVQQKATYKEPNYAV-  246 (285)
T ss_dssp             ------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCCCC-
T ss_pred             CCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH------HHHhhhccCCccccc-
Confidence            4322   123457899999999875 57899999999999999999999999764411      111111111110000 


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .   ...    ....+.+++.+|++.||.+|||+.|+++.
T Consensus       247 ~---~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          247 E---CRP----LTPQAVDLLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             -----CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             c---cCc----CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0   011    12356688999999999999999999863


No 151
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=2.5e-38  Score=353.08  Aligned_cols=249  Identities=22%  Similarity=0.262  Sum_probs=194.2

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccC---CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRS---SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      .++|++.+.||+|+||.||+++.. +++.||||++...   .......+.+|+.++.+++||||+++++++.+.+..++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            367889999999999999999864 5889999998753   233445678899999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHK-YSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      |||+++|+|..++...   ..+++..+..++.||+.||+|||+ .+   |+||||||+||||+.++.+||+|||+++...
T Consensus       227 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  300 (446)
T 4ejn_A          227 MEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGI  300 (446)
T ss_dssp             ECCCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred             EeeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence            9999999999988653   358999999999999999999998 77   9999999999999999999999999997533


Q ss_pred             ccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccC
Q 043278          584 VNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELID  663 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  663 (752)
                      ...  .......||+.|+|||++.+..++.++|||||||++|||++|+.||......      ......... ..     
T Consensus       301 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~-~~-----  366 (446)
T 4ejn_A          301 KDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------KLFELILME-EI-----  366 (446)
T ss_dssp             C-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHC-CC-----
T ss_pred             CCC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH------HHHHHHHhC-CC-----
Confidence            221  2233468999999999999999999999999999999999999999665421      111111111 11     


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 043278          664 PSLEQPCSANEVMRCIHVGLLCVQDQAMDRP-----TMPEVVCM  702 (752)
Q Consensus       664 ~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RP-----t~~ev~~~  702 (752)
                       .+    +......+.+++.+||+.||.+||     +++|++++
T Consensus       367 -~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          367 -RF----PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             -CC----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             -CC----CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence             01    111224577899999999999999     99999875


No 152
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=8.3e-38  Score=326.30  Aligned_cols=247  Identities=24%  Similarity=0.358  Sum_probs=199.8

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      .++|.+.+.||+|+||.||++... +++.||||++....   ......+.+|+.++.+++||||+++++++.+.+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            367888899999999999999875 46789999986432   23456789999999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||+++++|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++.....
T Consensus        88 ~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~  161 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS  161 (279)
T ss_dssp             ECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred             EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence            9999999999998654   34899999999999999999999988   99999999999999999999999999865332


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      .    ......|++.|+|||.+.+..++.++||||||+++|||++|+.||......      . .........      .
T Consensus       162 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~-~~~~~~~~~------~  224 (279)
T 3fdn_A          162 S----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------E-TYKRISRVE------F  224 (279)
T ss_dssp             ----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------H-HHHHHHHTC------C
T ss_pred             c----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH------H-HHHHHHhCC------C
Confidence            2    123357899999999999999999999999999999999999999754311      1 111111111      0


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ..    +......+.+++.+|++.||.+|||+.|++++
T Consensus       225 ~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          225 TF----PDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             CC----CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             CC----CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            11    11122356788999999999999999999986


No 153
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=2.6e-37  Score=327.72  Aligned_cols=258  Identities=19%  Similarity=0.234  Sum_probs=199.5

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcc---cHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQ---GIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      -++|.+.+.||+|+||.||+++.. +++.||+|++......   ....+.+|+.++.+++||||+++++++..++..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            478999999999999999999875 6889999999765322   346789999999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||+++++|.+++...   ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++.....
T Consensus       113 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  186 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTD  186 (309)
T ss_dssp             EECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred             EEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence            9999999999998653   35899999999999999999999998   99999999999999999999999999986543


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCC-cccccC
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGK-GLELID  663 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~d  663 (752)
                      ... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||.....       ......+.... ......
T Consensus       187 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~~  258 (309)
T 2h34_A          187 EKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-------SVMGAHINQAIPRPSTVR  258 (309)
T ss_dssp             -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH-------HHHHHHHHSCCCCGGGTS
T ss_pred             ccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH-------HHHHHHhccCCCCccccC
Confidence            321 112245689999999999999999999999999999999999999975431       11112222211 111111


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHhhcCCC
Q 043278          664 PSLEQPCSANEVMRCIHVGLLCVQDQAMDRP-TMPEVVCMLQNETM  708 (752)
Q Consensus       664 ~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RP-t~~ev~~~L~~~~~  708 (752)
                      +        .....+.+++.+||+.||++|| +++++++.|+....
T Consensus       259 ~--------~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~  296 (309)
T 2h34_A          259 P--------GIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA  296 (309)
T ss_dssp             T--------TCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred             C--------CCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence            1        1123467889999999999999 99999999988754


No 154
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=6.9e-38  Score=334.73  Aligned_cols=264  Identities=23%  Similarity=0.375  Sum_probs=207.9

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-----cCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCC--ee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-----ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGE--ER  501 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~  501 (752)
                      .++|++.+.||+|+||.||+++.     .+++.||||++..........+.+|+.++.+++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            35688889999999999999984     357899999998776666778999999999999999999999987644  68


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                      ++||||+++++|.+++....  ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~  194 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKV  194 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhh
Confidence            99999999999999996542  35899999999999999999999988   99999999999999999999999999987


Q ss_pred             ecccccc-cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCC---------CCCCcchHHHHHH
Q 043278          582 FEVNESE-ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHH---------PDRPLNLIGYAWQ  651 (752)
Q Consensus       582 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~---------~~~~~~l~~~~~~  651 (752)
                      ....... .......++..|+|||.+.+..++.++||||||++++||++|+.|+....         .............
T Consensus       195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (326)
T 2w1i_A          195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE  274 (326)
T ss_dssp             CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred             ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence            6543221 11223456778999999999999999999999999999999998875321         0000011111112


Q ss_pred             HhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          652 LLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       652 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      .+..+...         +.+......+.+++.+||+.||.+|||+.||++.|+.+
T Consensus       275 ~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l  320 (326)
T 2w1i_A          275 LLKNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI  320 (326)
T ss_dssp             HHHTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhhcCCCC---------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            22222111         11112234577899999999999999999999999864


No 155
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=4.7e-38  Score=335.30  Aligned_cols=252  Identities=24%  Similarity=0.294  Sum_probs=204.7

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc------ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG------QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEER  501 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  501 (752)
                      .++|.+.+.||+|+||.||+++.. +++.||+|.+.....      ....++.+|+.++.+++||||+++++++.+++..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            467889999999999999999875 588999999876432      1467899999999999999999999999999999


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCC----Cceecccc
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKM----NPKISDFG  577 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~----~~kl~DFg  577 (752)
                      ++||||+++++|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++    .+||+|||
T Consensus        91 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg  164 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG  164 (321)
T ss_dssp             EEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred             EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCc
Confidence            999999999999999854   345899999999999999999999998   99999999999999888    79999999


Q ss_pred             cceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCC
Q 043278          578 MARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGK  657 (752)
Q Consensus       578 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  657 (752)
                      +++......   ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......      .. ...+....
T Consensus       165 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~-~~~i~~~~  234 (321)
T 2a2a_A          165 LAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ET-LANITSVS  234 (321)
T ss_dssp             TCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HH-HHHHHTTC
T ss_pred             cceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH------HH-HHHHHhcc
Confidence            998755322   123456899999999999999999999999999999999999999654311      11 11111111


Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          658 GLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       658 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ..  .++.....    ....+.+++.+|++.||.+|||+.|++++
T Consensus       235 ~~--~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          235 YD--FDEEFFSH----TSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             CC--CCHHHHTT----CCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             cc--cChhhhcc----cCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            00  00000011    12356789999999999999999999884


No 156
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=6.4e-38  Score=354.81  Aligned_cols=254  Identities=25%  Similarity=0.344  Sum_probs=207.2

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccC---CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRS---SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      .++|...+.||+|+||.||+++.. +|+.||||++...   .......+.+|+.++.+++||||+++++++.+.+..++|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            467888899999999999999875 6899999998653   233456788999999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||+++|+|..++.... ...+++..+..++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++....
T Consensus       263 mEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~  338 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE  338 (576)
T ss_dssp             ECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceeccc
Confidence            99999999999986543 345899999999999999999999998   99999999999999999999999999987643


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      ..   ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+   ........      .
T Consensus       339 ~~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i---~~~i~~~~------~  406 (576)
T 2acx_A          339 GQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV---ERLVKEVP------E  406 (576)
T ss_dssp             TC---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHH---HHHHHHCC------C
T ss_pred             Cc---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHH---HHHhhccc------c
Confidence            32   123357999999999999999999999999999999999999999876533222111   11111111      0


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRP-----TMPEVVCM  702 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RP-----t~~ev~~~  702 (752)
                      .+    +......+.+|+.+||+.||.+||     ++.||+++
T Consensus       407 ~~----p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          407 EY----SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             CC----CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             cC----CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence            11    111224577889999999999999     78888765


No 157
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=2.1e-37  Score=346.51  Aligned_cols=261  Identities=20%  Similarity=0.269  Sum_probs=206.0

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHHHhcCC-CCcceeeeeeeeCCeeEEEEe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQH-TNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~E  506 (752)
                      .++|.+.++||+|+||.||+|+. .+++.||||++......  .++.+|++++..++| +++..+..++.+++..+||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            46899999999999999999986 56889999987654332  357899999999987 556666667778889999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEe---cCCCCceecccccceeec
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILL---DDKMNPKISDFGMARIFE  583 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll---~~~~~~kl~DFgla~~~~  583 (752)
                      |+ +++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+||||   +.++.+||+|||+++...
T Consensus        84 ~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           84 LL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             CC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence            99 99999998643  235999999999999999999999998   9999999999999   689999999999998765


Q ss_pred             ccccc-----cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCc
Q 043278          584 VNESE-----ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKG  658 (752)
Q Consensus       584 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  658 (752)
                      .....     .......||..|+|||.+.+..++.++|||||||+||||++|+.||...........+............
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~  237 (483)
T 3sv0_A          158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI  237 (483)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred             CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence            43321     1123567999999999999999999999999999999999999999876543322222221111111111


Q ss_pred             ccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          659 LELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       659 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      ..+.     ...    ...+.+++..||+.+|++||++.+|+++|+.+
T Consensus       238 ~~l~-----~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          238 EALC-----RGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HHHH-----TTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHh-----cCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            1110     111    24578899999999999999999999998764


No 158
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=3.4e-38  Score=337.29  Aligned_cols=255  Identities=29%  Similarity=0.435  Sum_probs=202.6

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCce--eEEEEcccC-CcccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCeeEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQE--VAIKRLSRS-SGQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~--vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  504 (752)
                      ++|.+.+.||+|+||.||+++.. ++..  +|+|.+... .......+.+|++++.++ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            57888899999999999999864 4554  499988754 233455789999999999 999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCc
Q 043278          505 YEFMPNKSLDFFLFNSG-------------RKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNP  571 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~  571 (752)
                      |||+++++|.+++....             ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence            99999999999986542             2346899999999999999999999998   9999999999999999999


Q ss_pred             eecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHH
Q 043278          572 KISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAW  650 (752)
Q Consensus       572 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~  650 (752)
                      ||+|||+++.....   .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....       ....
T Consensus       182 kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-------~~~~  251 (327)
T 1fvr_A          182 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-------AELY  251 (327)
T ss_dssp             EECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHH
T ss_pred             EEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-------HHHH
Confidence            99999999743211   11223456789999999999999999999999999999998 9999965541       1112


Q ss_pred             HHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          651 QLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       651 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      ..+..+....         .+......+.+++.+|++.||.+|||+.|+++.|+.+
T Consensus       252 ~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  298 (327)
T 1fvr_A          252 EKLPQGYRLE---------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  298 (327)
T ss_dssp             HHGGGTCCCC---------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHhhcCCCCC---------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            2222221111         1112234577899999999999999999999999875


No 159
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.1e-37  Score=341.47  Aligned_cols=264  Identities=21%  Similarity=0.316  Sum_probs=191.6

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccC--CcccHHHHHHHHHHHHhcC-CCCcceeeeeeeeCC--ee
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRS--SGQGIVEFKNEVRLIAKLQ-HTNLVRLLGCSLHGE--ER  501 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~  501 (752)
                      ..++|.+.+.||+|+||.||+|... +++.||||++...  .......+.+|+.++.++. ||||+++++++...+  ..
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            4578999999999999999999864 6889999998654  2334556789999999997 999999999997544  68


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                      ++|||||+ ++|..++..    ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus        87 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~  158 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRS  158 (388)
T ss_dssp             EEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence            99999998 688888854    35899999999999999999999998   99999999999999999999999999986


Q ss_pred             ecccc-------------------cccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 043278          582 FEVNE-------------------SEANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDR  641 (752)
Q Consensus       582 ~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~  641 (752)
                      +....                   .........||+.|+|||++.+ ..++.++|||||||+++||++|+.||.......
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~  238 (388)
T 3oz6_A          159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN  238 (388)
T ss_dssp             SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            53211                   0111234579999999999986 679999999999999999999999997654221


Q ss_pred             CcchHHHHHHHhhCCCcccc--c-------------------CCCCCCCC------------CHHHHHHHHHHHHHcccC
Q 043278          642 PLNLIGYAWQLLSDGKGLEL--I-------------------DPSLEQPC------------SANEVMRCIHVGLLCVQD  688 (752)
Q Consensus       642 ~~~l~~~~~~~~~~~~~~~~--~-------------------d~~l~~~~------------~~~~~~~l~~l~~~Cl~~  688 (752)
                      .   .......+.......+  +                   ........            .......+.+|+.+||+.
T Consensus       239 ~---~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~  315 (388)
T 3oz6_A          239 Q---LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF  315 (388)
T ss_dssp             H---HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCS
T ss_pred             H---HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhcc
Confidence            1   1111111110000000  0                   00000000            001123577899999999


Q ss_pred             CCCCCCCHHHHHHH
Q 043278          689 QAMDRPTMPEVVCM  702 (752)
Q Consensus       689 dp~~RPt~~ev~~~  702 (752)
                      ||.+|||+.|++++
T Consensus       316 dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          316 NPNKRISANDALKH  329 (388)
T ss_dssp             SGGGSCCHHHHTTS
T ss_pred             CcccCCCHHHHhCC
Confidence            99999999999886


No 160
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.2e-38  Score=340.37  Aligned_cols=254  Identities=22%  Similarity=0.308  Sum_probs=202.8

Q ss_pred             cCCCcCCeeecCCcccEEEEEe----cCCceeEEEEcccCC----cccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCe
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKL----ADEQEVAIKRLSRSS----GQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEE  500 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~----~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  500 (752)
                      ++|.+.+.||+|+||.||+++.    .+++.||||+++...    ......+.+|+.++.++ +|+||+++++++..++.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            5788899999999999999987    368899999987532    22345577899999999 69999999999999999


Q ss_pred             eEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccce
Q 043278          501 RLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMAR  580 (752)
Q Consensus       501 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~  580 (752)
                      .++||||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+||||+.++.+||+|||+++
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~  207 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK  207 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             EEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence            99999999999999998653   35899999999999999999999998   9999999999999999999999999998


Q ss_pred             eecccccccccccccccCCccChhhhcc--CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCc
Q 043278          581 IFEVNESEANTKRIVGTYGYMSPEYAMS--GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKG  658 (752)
Q Consensus       581 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  658 (752)
                      ........ ......||+.|+|||++.+  ..++.++||||||+++|||++|+.||.........  ...........  
T Consensus       208 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~--  282 (355)
T 1vzo_A          208 EFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ--AEISRRILKSE--  282 (355)
T ss_dssp             ECCGGGGG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH--HHHHHHHHHCC--
T ss_pred             ecccCCCC-cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchH--HHHHHHHhccC--
Confidence            75433222 2234679999999999986  45789999999999999999999999765533322  11111222111  


Q ss_pred             ccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHHh
Q 043278          659 LELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRP-----TMPEVVCML  703 (752)
Q Consensus       659 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RP-----t~~ev~~~L  703 (752)
                           +..    +......+.+|+.+||+.||.+||     |+.|++++.
T Consensus       283 -----~~~----~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          283 -----PPY----PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             -----CCC----CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred             -----CCC----CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence                 111    112224567899999999999999     999998875


No 161
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=2.2e-38  Score=366.96  Aligned_cols=248  Identities=28%  Similarity=0.371  Sum_probs=198.2

Q ss_pred             CeeecCCcccEEEEEec---CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeCCC
Q 043278          436 NKLGEGGFGPVYKGKLA---DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFMPN  510 (752)
Q Consensus       436 ~~LG~G~fg~Vy~~~~~---~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~  510 (752)
                      ++||+|+||.||+|.+.   .++.||||+++...  ....+++.+|++++.+++|||||++++++.. +..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            57999999999999653   45789999997643  3346789999999999999999999999864 568899999999


Q ss_pred             CCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccccc-c
Q 043278          511 KSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESE-A  589 (752)
Q Consensus       511 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~-~  589 (752)
                      |+|.+++...   ..+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.+...... .
T Consensus       454 g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~  527 (635)
T 4fl3_A          454 GPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK  527 (635)
T ss_dssp             EEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred             CCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence            9999999643   35899999999999999999999998   999999999999999999999999999876533221 1


Q ss_pred             ccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCC
Q 043278          590 NTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQ  668 (752)
Q Consensus       590 ~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~  668 (752)
                      ......+|+.|+|||++.+..++.++||||||++||||++ |+.||......       .....+..+.....       
T Consensus       528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-------~~~~~i~~~~~~~~-------  593 (635)
T 4fl3_A          528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-------EVTAMLEKGERMGC-------  593 (635)
T ss_dssp             -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTTCCCCC-------
T ss_pred             cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCCCCC-------
Confidence            2223456788999999999999999999999999999998 99999765421       12233333322211       


Q ss_pred             CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          669 PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       669 ~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                        +......+.+|+.+||+.||++|||+.+|+++|+..
T Consensus       594 --p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  629 (635)
T 4fl3_A          594 --PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  629 (635)
T ss_dssp             --CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             --CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence              112234677899999999999999999999999864


No 162
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=7.3e-38  Score=336.31  Aligned_cols=253  Identities=21%  Similarity=0.270  Sum_probs=200.4

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCeeEEEE
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ..++|++.+.||+|+||.||++... +++.||||++......    ..+|++++.++ +||||+++++++.+++..++||
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            3567999999999999999999875 5889999999765432    35688888887 7999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCC-C---Cceeccccccee
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDK-M---NPKISDFGMARI  581 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~-~---~~kl~DFgla~~  581 (752)
                      ||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||+.++ +   .+||+|||+++.
T Consensus        96 E~~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~  169 (342)
T 2qr7_A           96 ELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ  169 (342)
T ss_dssp             CCCCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred             eCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence            999999999988643   45899999999999999999999998   9999999999998443 3   499999999987


Q ss_pred             ecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccc
Q 043278          582 FEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLEL  661 (752)
Q Consensus       582 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  661 (752)
                      ......  ......||+.|+|||++.+..++.++||||||+++|||++|+.||.........    .....+..+... +
T Consensus       170 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~----~~~~~i~~~~~~-~  242 (342)
T 2qr7_A          170 LRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE----EILARIGSGKFS-L  242 (342)
T ss_dssp             CBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHH----HHHHHHHHCCCC-C
T ss_pred             CcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHH----HHHHHHccCCcc-c
Confidence            543322  223467899999999999888999999999999999999999999764322211    112222222211 0


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          662 IDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       662 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                       .    ..........+.+++.+|++.||++|||+.|++++
T Consensus       243 -~----~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          243 -S----GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             -C----STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             -C----ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence             0    11111123456788999999999999999999875


No 163
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=1.6e-37  Score=326.58  Aligned_cols=253  Identities=23%  Similarity=0.349  Sum_probs=200.1

Q ss_pred             CCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEeeCC
Q 043278          431 NFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEFMP  509 (752)
Q Consensus       431 ~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~  509 (752)
                      .|.....||+|+||.||+|.. .+++.||||.+..........+.+|+.++.+++||||+++++++.+.+..++||||++
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  102 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP  102 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence            445556999999999999986 4578999999987766667789999999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC-CCCceecccccceeecccccc
Q 043278          510 NKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD-KMNPKISDFGMARIFEVNESE  588 (752)
Q Consensus       510 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~-~~~~kl~DFgla~~~~~~~~~  588 (752)
                      +++|.+++........+++..+..++.||+.||+|||+.+   |+|+||||+|||++. ++.+||+|||+++......  
T Consensus       103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~--  177 (295)
T 2clq_A          103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN--  177 (295)
T ss_dssp             EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred             CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC--
Confidence            9999999976555556789999999999999999999998   999999999999987 8999999999998654322  


Q ss_pred             cccccccccCCccChhhhccCC--CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCC
Q 043278          589 ANTKRIVGTYGYMSPEYAMSGI--VSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSL  666 (752)
Q Consensus       589 ~~~~~~~gt~~y~aPE~~~~~~--~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  666 (752)
                      .......|++.|+|||.+.+..  ++.++||||||+++|||++|+.||.......    .. ........     ..+.+
T Consensus       178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~-~~~~~~~~-----~~~~~  247 (295)
T 2clq_A          178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ----AA-MFKVGMFK-----VHPEI  247 (295)
T ss_dssp             ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH----HH-HHHHHHHC-----CCCCC
T ss_pred             CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh----HH-HHhhcccc-----ccccc
Confidence            1123457899999999987654  8899999999999999999999986433110    01 11110000     11111


Q ss_pred             CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          667 EQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       667 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ..    .....+.+++.+||+.||++|||+.|+++.
T Consensus       248 ~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          248 PE----SMSAEAKAFILKCFEPDPDKRACANDLLVD  279 (295)
T ss_dssp             CT----TSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred             cc----cCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            11    122456788999999999999999999864


No 164
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=5.8e-38  Score=336.43  Aligned_cols=243  Identities=21%  Similarity=0.291  Sum_probs=200.6

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCc--------ccHHHHHHHHHHHHhcCCCCcceeeeeeeeC
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSG--------QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG  498 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  498 (752)
                      ..++|.+.+.||+|+||.||+|+. .+++.||||++.....        .....+.+|+.++.+++||||+++++++.+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            457899999999999999999986 4688999999876531        1233567899999999999999999999999


Q ss_pred             CeeEEEEeeCCCC-CHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccc
Q 043278          499 EERLLVYEFMPNK-SLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFG  577 (752)
Q Consensus       499 ~~~~lv~E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFg  577 (752)
                      +..++||||+..| +|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg  175 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFIDRH---PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFG  175 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHHTC---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCT
T ss_pred             CEEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecc
Confidence            9999999999777 998888543   35999999999999999999999998   9999999999999999999999999


Q ss_pred             cceeecccccccccccccccCCccChhhhccCCC-CccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCC
Q 043278          578 MARIFEVNESEANTKRIVGTYGYMSPEYAMSGIV-SIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDG  656 (752)
Q Consensus       578 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  656 (752)
                      +++......   ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||......                
T Consensus       176 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----------------  236 (335)
T 3dls_A          176 SAAYLERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET----------------  236 (335)
T ss_dssp             TCEECCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----------------
T ss_pred             cceECCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----------------
Confidence            998765332   1224578999999999998876 88999999999999999999999642210                


Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          657 KGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       657 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                           .......  +......+.+++.+||+.||.+|||+.|+++.
T Consensus       237 -----~~~~~~~--~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          237 -----VEAAIHP--PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             -----TTTCCCC--SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             -----HhhccCC--CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                 0000000  00112357788999999999999999999986


No 165
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=5.6e-37  Score=324.25  Aligned_cols=252  Identities=19%  Similarity=0.266  Sum_probs=198.9

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC----cccHHHHHHHHHHHHhcCCCCcceeeeeee--eCCee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS----GQGIVEFKNEVRLIAKLQHTNLVRLLGCSL--HGEER  501 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~  501 (752)
                      .++|.+.+.||+|+||.||++... +++.||+|++....    ......+.+|+.++.+++|+||+++++++.  +....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            468999999999999999999874 57899999987542    234567899999999999999999999984  45578


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                      ++||||++++ |.+++... ....+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++..
T Consensus        84 ~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~  158 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEA  158 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccc
Confidence            9999999987 66666543 2346899999999999999999999998   99999999999999999999999999987


Q ss_pred             ecccccccccccccccCCccChhhhccCC--CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcc
Q 043278          582 FEVNESEANTKRIVGTYGYMSPEYAMSGI--VSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGL  659 (752)
Q Consensus       582 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  659 (752)
                      ..............|++.|+|||.+.+..  .+.++||||||+++|||++|+.||.....      . .....+..+.. 
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~-~~~~~i~~~~~-  230 (305)
T 2wtk_C          159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI------Y-KLFENIGKGSY-  230 (305)
T ss_dssp             CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH------H-HHHHHHHHCCC-
T ss_pred             cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH------H-HHHHHHhcCCC-
Confidence            65333333333457899999999987644  47899999999999999999999975431      1 11222222211 


Q ss_pred             cccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          660 ELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       660 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                           .+...    ....+.+++.+|++.||.+|||+.|++++
T Consensus       231 -----~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          231 -----AIPGD----CGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             -----CCCSS----SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             -----CCCCc----cCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                 11111    22356788999999999999999999976


No 166
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=3.1e-37  Score=324.51  Aligned_cols=249  Identities=23%  Similarity=0.322  Sum_probs=204.0

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      .++|.+.+.||+|+||.||+++.. +++.+|+|++....   ....+.+.+|+.++++++|+||+++++++.+++..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            367888899999999999999976 47889999986542   23456788999999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||+++++|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++.....
T Consensus        94 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  167 (294)
T 2rku_A           94 LELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY  167 (294)
T ss_dssp             EECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence            9999999999988543   35899999999999999999999998   99999999999999999999999999987543


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      ...  ......|++.|+|||.+.+..++.++||||||++++||++|+.||......      . .......+..      
T Consensus       168 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~-~~~~~~~~~~------  232 (294)
T 2rku_A          168 DGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------E-TYLRIKKNEY------  232 (294)
T ss_dssp             TTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------H-HHHHHHTTCC------
T ss_pred             Ccc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------H-HHHHHhhccC------
Confidence            221  123357899999999999999999999999999999999999999654311      1 1112222111      


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .+..    .....+.+++.+|++.||++|||+.|+++.
T Consensus       233 ~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          233 SIPK----HINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             CCCT----TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             CCcc----ccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            0111    112356788999999999999999999875


No 167
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=3.1e-38  Score=329.33  Aligned_cols=250  Identities=26%  Similarity=0.369  Sum_probs=196.5

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeC-CeeEEEEee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG-EERLLVYEF  507 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~E~  507 (752)
                      .++|.+.+.||+|+||.||+++. .++.||||++....  ..+.+.+|+.++.+++||||+++++++.+. +..++||||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            36788889999999999999987 47899999997543  456789999999999999999999987654 478999999


Q ss_pred             CCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccccc
Q 043278          508 MPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNES  587 (752)
Q Consensus       508 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~  587 (752)
                      +++++|.+++.... ...+++..++.++.|++.||+|||+.+   |+||||||+||+++.++.+||+|||++....... 
T Consensus        97 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-  171 (278)
T 1byg_A           97 MAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-  171 (278)
T ss_dssp             CTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred             CCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccc-
Confidence            99999999986432 223789999999999999999999998   9999999999999999999999999997543221 


Q ss_pred             ccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCC
Q 043278          588 EANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSL  666 (752)
Q Consensus       588 ~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  666 (752)
                          ....++..|+|||.+.+..++.++||||||++++||++ |+.||.......   .    ...+..+...     ..
T Consensus       172 ----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~----~~~~~~~~~~-----~~  235 (278)
T 1byg_A          172 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---V----VPRVEKGYKM-----DA  235 (278)
T ss_dssp             --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---H----HHHHTTTCCC-----CC
T ss_pred             ----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---H----HHHHhcCCCC-----CC
Confidence                12356889999999999999999999999999999998 999987654211   1    1122222111     11


Q ss_pred             CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          667 EQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       667 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                          +......+.+++.+|++.||.+|||+.|+++.|+.+
T Consensus       236 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          236 ----PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             ----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence                112234577889999999999999999999999864


No 168
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=4.4e-38  Score=328.21  Aligned_cols=259  Identities=25%  Similarity=0.320  Sum_probs=204.0

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeee--CCeeEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLH--GEERLL  503 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l  503 (752)
                      .++|++.+.||+|+||.||+++.. +++.||+|++....  ......+.+|+.++.+++||||+++++++.+  +...++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            367888999999999999999875 68899999997543  3345678999999999999999999998754  568899


Q ss_pred             EEeeCCCCCHhHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCcEeecCCCCCcEEecCCCCceecccccce
Q 043278          504 VYEFMPNKSLDFFLFNSG-RKNVLNWEKRFIIIEGISQGLLYLHKYS--RLRVIHRDLKASNILLDDKMNPKISDFGMAR  580 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~iiH~Dikp~NIll~~~~~~kl~DFgla~  580 (752)
                      ||||+++++|.+++.... ....+++..++.++.||+.||+|||+.+  ..+|+||||||+|||++.++.+||+|||+++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            999999999999986532 3445899999999999999999999976  2349999999999999999999999999998


Q ss_pred             eecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCccc
Q 043278          581 IFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLE  660 (752)
Q Consensus       581 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  660 (752)
                      .......  ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.....       ......+..+....
T Consensus       165 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~i~~~~~~~  235 (279)
T 2w5a_A          165 ILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-------KELAGKIREGKFRR  235 (279)
T ss_dssp             HC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCCC
T ss_pred             eeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-------HHHHHHHhhccccc
Confidence            6543221  12235689999999999999999999999999999999999999876531       11122222332211


Q ss_pred             ccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhc
Q 043278          661 LIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQN  705 (752)
Q Consensus       661 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~  705 (752)
                      +     ..    .....+.+++.+||+.||.+|||+.||++.+..
T Consensus       236 ~-----~~----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          236 I-----PY----RYSDELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             C-----CT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             C-----Cc----ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence            1     11    122457789999999999999999999997754


No 169
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=2.6e-37  Score=331.54  Aligned_cols=249  Identities=23%  Similarity=0.317  Sum_probs=203.9

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      .++|.+.+.||+|+||.||+++.. +++.||+|++....   ......+.+|+.++.+++|+||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            367888999999999999999875 47889999986542   23456788999999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||+++++|.+++...   ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus       120 ~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  193 (335)
T 2owb_A          120 LELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY  193 (335)
T ss_dssp             ECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence            9999999999988643   35899999999999999999999998   99999999999999999999999999987643


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      ...  ......|+..|+|||.+.+..++.++||||||+++|||++|+.||......      .. ...+..+..      
T Consensus       194 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~-~~~~~~~~~------  258 (335)
T 2owb_A          194 DGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------ET-YLRIKKNEY------  258 (335)
T ss_dssp             TTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HH-HHHHHHTCC------
T ss_pred             Ccc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH------HH-HHHHhcCCC------
Confidence            221  223457899999999999999999999999999999999999999654311      11 111111111      


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .+....    ...+.+++.+||+.||++|||+.|+++.
T Consensus       259 ~~~~~~----~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          259 SIPKHI----NPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             CCCTTS----CHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             CCCccC----CHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            111111    2346788999999999999999999874


No 170
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=2.1e-37  Score=349.90  Aligned_cols=255  Identities=23%  Similarity=0.319  Sum_probs=206.4

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      .++|...+.||+|+||.||+++.. +|+.||+|++....   ......+.+|+.++.+++||||+++++++.+.+..++|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            367888899999999999999975 58999999996542   23456788999999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          505 YEFMPNKSLDFFLFNSGR-KNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      |||+++|+|..++..... ...+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.+.
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            999999999999875432 446999999999999999999999998   9999999999999999999999999998754


Q ss_pred             ccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccC
Q 043278          584 VNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELID  663 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  663 (752)
                      ....  ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........  ......... ...     
T Consensus       341 ~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~--~~~~~~i~~-~~~-----  410 (543)
T 3c4z_A          341 AGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN--KELKQRVLE-QAV-----  410 (543)
T ss_dssp             TTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCH--HHHHHHHHH-CCC-----
T ss_pred             CCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhH--HHHHHHHhh-ccc-----
Confidence            3321  223458999999999999999999999999999999999999999876432221  111112221 111     


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 043278          664 PSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTM-----PEVVC  701 (752)
Q Consensus       664 ~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~-----~ev~~  701 (752)
                       ..    +......+.+++.+||+.||.+||++     .|+++
T Consensus       411 -~~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          411 -TY----PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             -CC----CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             -CC----CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence             01    11122456788899999999999975     56664


No 171
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=2e-37  Score=327.73  Aligned_cols=252  Identities=21%  Similarity=0.312  Sum_probs=202.7

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      ..++|.+.+.||+|+||.||+++.. +++.||+|.+..........+.+|+.++.+++||||+++++++.+.+..++|||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ   86 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence            3467888999999999999999875 688999999987655555678999999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEe---cCCCCceecccccceeec
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILL---DDKMNPKISDFGMARIFE  583 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll---~~~~~~kl~DFgla~~~~  583 (752)
                      |+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||+   ++++.+||+|||++....
T Consensus        87 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A           87 LVSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             CCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             cCCCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence            99999999988653   34899999999999999999999998   9999999999999   788999999999997543


Q ss_pred             ccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccC
Q 043278          584 VNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELID  663 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d  663 (752)
                      ..    ......|++.|+|||.+.+..++.++||||||+++|||++|+.||......       .....+..+... . .
T Consensus       161 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~i~~~~~~-~-~  227 (304)
T 2jam_A          161 NG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES-------KLFEKIKEGYYE-F-E  227 (304)
T ss_dssp             CB----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHCCCC-C-C
T ss_pred             CC----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHcCCCC-C-C
Confidence            22    122356899999999999999999999999999999999999999754311       111222222111 0 1


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          664 PSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       664 ~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .    +........+.+++.+|++.||.+|||+.|+++.
T Consensus       228 ~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          228 S----PFWDDISESAKDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             T----TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             c----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            1    1111223457789999999999999999999874


No 172
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=2.5e-37  Score=339.45  Aligned_cols=252  Identities=21%  Similarity=0.245  Sum_probs=191.5

Q ss_pred             cCCCcC-CeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHh-cCCCCcceeeeeeee----CCeeE
Q 043278          430 NNFSTT-NKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAK-LQHTNLVRLLGCSLH----GEERL  502 (752)
Q Consensus       430 ~~~~~~-~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~~~~  502 (752)
                      ++|.+. +.||+|+||+||++... +++.||||++...     ..+.+|+.++.+ .+||||+++++++..    ....+
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            455554 68999999999999875 5889999998642     356788888754 589999999998865    56789


Q ss_pred             EEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC---CCCceecccccc
Q 043278          503 LVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD---KMNPKISDFGMA  579 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~---~~~~kl~DFgla  579 (752)
                      |||||+++|+|.+++.... ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.   ++.+||+|||++
T Consensus       136 lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a  211 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFA  211 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccc
Confidence            9999999999999996532 345899999999999999999999988   999999999999987   789999999999


Q ss_pred             eeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcc
Q 043278          580 RIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGL  659 (752)
Q Consensus       580 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  659 (752)
                      +......   ......||+.|+|||++.+..++.++|||||||++|||++|+.||............   ...+..+.. 
T Consensus       212 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~---~~~i~~~~~-  284 (400)
T 1nxk_A          212 KETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM---KTRIRMGQY-  284 (400)
T ss_dssp             EECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSH---HHHHHHTCC-
T ss_pred             cccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHH---HHHHHcCcc-
Confidence            8654221   223467899999999999999999999999999999999999999876543322111   111111111 


Q ss_pred             cccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          660 ELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       660 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .+..+.     .......+.+|+.+||+.||.+|||+.|++++
T Consensus       285 ~~~~~~-----~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          285 EFPNPE-----WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             CCCTTT-----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             cCCCcc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            111110     01122457789999999999999999999986


No 173
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=1e-37  Score=329.65  Aligned_cols=250  Identities=27%  Similarity=0.419  Sum_probs=205.6

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      .+.|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++.+++||||+++++++.+....++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            356888899999999999999864 68899999987553 3456789999999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNE  586 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~  586 (752)
                      |+++++|.+++.    ...+++..+..++.||+.||.|||+.+   |+|+||||+||+++.++.+||+|||++.......
T Consensus       101 ~~~~~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~  173 (303)
T 3a7i_A          101 YLGGGSALDLLE----PGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ  173 (303)
T ss_dssp             CCTTEEHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred             eCCCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc
Confidence            999999999984    345899999999999999999999998   9999999999999999999999999998765332


Q ss_pred             cccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCC
Q 043278          587 SEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSL  666 (752)
Q Consensus       587 ~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  666 (752)
                      .  ......|++.|+|||.+.+..++.++||||||++++||++|+.||......      .. ......+..     +.+
T Consensus       174 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~-~~~~~~~~~-----~~~  239 (303)
T 3a7i_A          174 I--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM------KV-LFLIPKNNP-----PTL  239 (303)
T ss_dssp             C--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HH-HHHHHHSCC-----CCC
T ss_pred             c--ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH------HH-HHHhhcCCC-----CCC
Confidence            1  223457899999999999999999999999999999999999998654311      11 111111111     111


Q ss_pred             CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 043278          667 EQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCML  703 (752)
Q Consensus       667 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L  703 (752)
                      ....+    ..+.+++..|++.||.+|||+.|+++..
T Consensus       240 ~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~~  272 (303)
T 3a7i_A          240 EGNYS----KPLKEFVEACLNKEPSFRPTAKELLKHK  272 (303)
T ss_dssp             CSSCC----HHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred             ccccC----HHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence            12222    3477889999999999999999998753


No 174
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.8e-38  Score=339.01  Aligned_cols=262  Identities=23%  Similarity=0.386  Sum_probs=194.1

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCccc-HHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEee
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQG-IVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEF  507 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  507 (752)
                      ++|.+.++||+|+||.||+|+.. +++.||||++....... ...+.+|+.++.+++||||+++++++..++..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            46888899999999999999875 68899999986543221 12345799999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccccc
Q 043278          508 MPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNES  587 (752)
Q Consensus       508 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~  587 (752)
                      ++ ++|..++...  ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++...... 
T Consensus        82 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-  154 (324)
T 3mtl_A           82 LD-KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-  154 (324)
T ss_dssp             CS-EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred             cc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCc-
Confidence            98 5888887653  345899999999999999999999998   9999999999999999999999999998644222 


Q ss_pred             ccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCc---ccccC
Q 043278          588 EANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKG---LELID  663 (752)
Q Consensus       588 ~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~d  663 (752)
                       .......+|+.|+|||++.+ ..++.++||||||+++|||++|+.||.......   ........+.....   .....
T Consensus       155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~  230 (324)
T 3mtl_A          155 -KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILS  230 (324)
T ss_dssp             ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGG
T ss_pred             -cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChHhchhhhc
Confidence             11223567999999999876 678999999999999999999999997654221   11112221111100   00000


Q ss_pred             ---------CCCCCC----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          664 ---------PSLEQP----CSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       664 ---------~~l~~~----~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                               +.....    ........+.+|+.+|++.||.+|||+.|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  282 (324)
T 3mtl_A          231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH  282 (324)
T ss_dssp             CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence                     000000    000112456789999999999999999999884


No 175
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=6.3e-38  Score=350.55  Aligned_cols=259  Identities=23%  Similarity=0.241  Sum_probs=194.4

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccC--CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeC------C
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRS--SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG------E  499 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~  499 (752)
                      .++|++.++||+|+||.||+|... +++.||||++...  ......++.+|+.+++.++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            468899999999999999999864 5889999999754  333456788999999999999999999998654      3


Q ss_pred             eeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccc
Q 043278          500 ERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMA  579 (752)
Q Consensus       500 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla  579 (752)
                      ..+|||||++++ |...+.     ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++
T Consensus       141 ~~~lv~E~~~~~-l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a  211 (464)
T 3ttj_A          141 DVYLVMELMDAN-LCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  211 (464)
T ss_dssp             EEEEEEECCSEE-HHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred             eEEEEEeCCCCC-HHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEee
Confidence            579999999865 545552     23899999999999999999999998   999999999999999999999999999


Q ss_pred             eeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCC---
Q 043278          580 RIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDG---  656 (752)
Q Consensus       580 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~---  656 (752)
                      +.....   .......||+.|+|||++.+..++.++|||||||+++||++|+.||........   .....+.+...   
T Consensus       212 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~---~~~i~~~lg~p~~~  285 (464)
T 3ttj_A          212 RTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ---WNKVIEQLGTPCPE  285 (464)
T ss_dssp             -----C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCSCCHH
T ss_pred             eecCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhcCCCCHH
Confidence            865432   123346889999999999999999999999999999999999999976542111   11111111000   


Q ss_pred             -----------------Ccc-----cccCCCCCCC---CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          657 -----------------KGL-----ELIDPSLEQP---CSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       657 -----------------~~~-----~~~d~~l~~~---~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                                       ...     ..+...+...   ........+.+|+.+||+.||++|||++|++++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             HHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                             000     0000000000   011124567899999999999999999999986


No 176
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=7.5e-38  Score=327.21  Aligned_cols=252  Identities=23%  Similarity=0.303  Sum_probs=201.5

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc------ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG------QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEER  501 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  501 (752)
                      .++|.+.+.||+|+||.||+++.. +++.||+|.+.....      .....+.+|+.++.+++||||+++++++.+.+..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV   83 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence            357888999999999999999976 588999999875421      2467899999999999999999999999999999


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCC----Cceecccc
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKM----NPKISDFG  577 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~----~~kl~DFg  577 (752)
                      ++||||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+|+||||+||+++.++    .+||+|||
T Consensus        84 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg  157 (283)
T 3bhy_A           84 VLILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFG  157 (283)
T ss_dssp             EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred             EEEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecc
Confidence            9999999999999998643   35899999999999999999999998   99999999999998877    89999999


Q ss_pred             cceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCC
Q 043278          578 MARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGK  657 (752)
Q Consensus       578 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~  657 (752)
                      ++.......   ......+++.|+|||.+.+..++.++||||||++++||++|+.||......       .....+....
T Consensus       158 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~  227 (283)
T 3bhy_A          158 IAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-------ETLTNISAVN  227 (283)
T ss_dssp             TCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTTC
T ss_pred             cceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-------HHHHHhHhcc
Confidence            998654322   122356899999999999999999999999999999999999999764321       1111111111


Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          658 GLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       658 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ..  ..+....    .....+.+++.+|++.||.+|||+.|++++
T Consensus       228 ~~--~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  266 (283)
T 3bhy_A          228 YD--FDEEYFS----NTSELAKDFIRRLLVKDPKRRMTIAQSLEH  266 (283)
T ss_dssp             CC--CCHHHHT----TCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred             cC--Ccchhcc----cCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence            00  0000000    112357789999999999999999999874


No 177
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=6.4e-38  Score=338.71  Aligned_cols=262  Identities=18%  Similarity=0.184  Sum_probs=204.1

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecC---------CceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcce---------
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLAD---------EQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVR---------  490 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~---------  490 (752)
                      .++|.+.+.||+|+||.||+|+...         ++.||||.+...     ..+.+|+.++.+++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            3678889999999999999998764         789999998754     35789999999999999988         


Q ss_pred             ------eeeeeee-CCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcE
Q 043278          491 ------LLGCSLH-GEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNI  563 (752)
Q Consensus       491 ------l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NI  563 (752)
                            +++++.. +...++||||+ +++|.+++.... ...+++..++.++.||+.||+|||+++   |+||||||+||
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NI  190 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENI  190 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGE
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHE
Confidence                  5667765 67889999999 999999997532 356999999999999999999999998   99999999999


Q ss_pred             EecCCC--Cceecccccceeecccccc-----cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 043278          564 LLDDKM--NPKISDFGMARIFEVNESE-----ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTR  636 (752)
Q Consensus       564 ll~~~~--~~kl~DFgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~  636 (752)
                      |++.++  .+||+|||+++.+......     .......||+.|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus       191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  270 (352)
T 2jii_A          191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN  270 (352)
T ss_dssp             EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred             EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            999998  9999999999876533221     112335789999999999999999999999999999999999999976


Q ss_pred             CCCCCCcchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          637 HHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       637 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      ......  .+......... ....+.+......   .....+.+++.+|++.||.+|||++||++.|+.+
T Consensus       271 ~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  334 (352)
T 2jii_A          271 CLPNTE--DIMKQKQKFVD-KPGPFVGPCGHWI---RPSETLQKYLKVVMALTYEEKPPYAMLRNNLEAL  334 (352)
T ss_dssp             GTTCHH--HHHHHHHHHHH-SCCCEECTTSCEE---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             CCcCHH--HHHHHHHhccC-ChhhhhhhccccC---CCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence            542211  11111111111 1112222111110   1124577888999999999999999999999875


No 178
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=8.1e-38  Score=339.40  Aligned_cols=244  Identities=20%  Similarity=0.273  Sum_probs=190.3

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc---ccHHHHHHHHHH-HHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG---QGIVEFKNEVRL-IAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      ++|++.+.||+|+||.||+++.. +++.||||++.+...   .....+.+|..+ ++.++||||+++++++.+.+..++|
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            57888999999999999999975 478899999976532   233445666665 4678999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||+++|+|..++...   ..+++..+..++.||+.||+|||+++   |+||||||+||||+.++++||+|||+++....
T Consensus       118 ~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~  191 (373)
T 2r5t_A          118 LDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIE  191 (373)
T ss_dssp             EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred             EeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence            9999999999998653   35889999999999999999999998   99999999999999999999999999975322


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      .  .......+||+.|+|||++.+..++.++|||||||++|||++|+.||.....      .......+.. ..      
T Consensus       192 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~-~~------  256 (373)
T 2r5t_A          192 H--NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT------AEMYDNILNK-PL------  256 (373)
T ss_dssp             C--CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH------HHHHHHHHHS-CC------
T ss_pred             C--CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHhc-cc------
Confidence            2  1223456899999999999999999999999999999999999999975432      1111222221 11      


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPE  698 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~e  698 (752)
                      .+...    ....+.+++.+||+.||.+||++.+
T Consensus       257 ~~~~~----~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          257 QLKPN----ITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             CCCSS----SCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             CCCCC----CCHHHHHHHHHHcccCHHhCCCCCC
Confidence            01111    1235678899999999999999854


No 179
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=7.7e-39  Score=349.26  Aligned_cols=243  Identities=15%  Similarity=0.156  Sum_probs=188.3

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccC---CcccHHHHHHHH---HHHHhcCCCCcceee-------ee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRS---SGQGIVEFKNEV---RLIAKLQHTNLVRLL-------GC  494 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~  494 (752)
                      .++|.+.+.||+|+||.||+|+. .+++.||||++...   .....+.+.+|+   +++++++||||++++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            36788889999999999999996 56899999999743   333457788999   555566899999998       55


Q ss_pred             eeeCC-----------------eeEEEEeeCCCCCHhHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcE
Q 043278          495 SLHGE-----------------ERLLVYEFMPNKSLDFFLFNSGR----KNVLNWEKRFIIIEGISQGLLYLHKYSRLRV  553 (752)
Q Consensus       495 ~~~~~-----------------~~~lv~E~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i  553 (752)
                      +...+                 ..+|||||+ +|+|.+++.....    ...+++..++.++.||+.||+|||+.+   |
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            44432                 278999999 6899999875321    223556888999999999999999998   9


Q ss_pred             eecCCCCCcEEecCCCCceecccccceeecccccccccccccccCCccChhhhccC-----------CCCccchhHHHHH
Q 043278          554 IHRDLKASNILLDDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSG-----------IVSIKTDVFSFGV  622 (752)
Q Consensus       554 iH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~t~k~DV~S~G~  622 (752)
                      +||||||+||||+.++.+||+|||+++....     ......| +.|+|||++.+.           .++.++|||||||
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~  301 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL  301 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence            9999999999999999999999999985322     2223567 999999999887           8999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          623 LVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       623 vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ++|||++|+.||...........               +.. .. ...    ...+.+++.+||+.||.+|||+.|++++
T Consensus       302 il~elltg~~Pf~~~~~~~~~~~---------------~~~-~~-~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~h  360 (377)
T 3byv_A          302 VIYWIWCADLPITKDAALGGSEW---------------IFR-SC-KNI----PQPVRALLEGFLRYPKEDRLLPLQAMET  360 (377)
T ss_dssp             HHHHHHHSSCCC------CCSGG---------------GGS-SC-CCC----CHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred             HHHHHHHCCCCCcccccccchhh---------------hhh-hc-cCC----CHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence            99999999999976553322211               001 00 111    2357788999999999999999999863


No 180
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=1.4e-37  Score=333.00  Aligned_cols=265  Identities=25%  Similarity=0.325  Sum_probs=199.5

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcc--cHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQ--GIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      ++|.+.+.||+|+||.||+++.. +++.||||++......  ....+.+|+.++.+++||||+++++++.+.+..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            57888899999999999999875 4889999998655332  34557899999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNE  586 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~  586 (752)
                      |+++++|..++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++......
T Consensus       105 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  178 (331)
T 4aaa_A          105 FVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG  178 (331)
T ss_dssp             CCSEEHHHHHHHST---TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             cCCcchHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence            99999998876432   34899999999999999999999998   9999999999999999999999999998654322


Q ss_pred             cccccccccccCCccChhhhccC-CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHH--------HHHHHhhCC-
Q 043278          587 SEANTKRIVGTYGYMSPEYAMSG-IVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIG--------YAWQLLSDG-  656 (752)
Q Consensus       587 ~~~~~~~~~gt~~y~aPE~~~~~-~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~--------~~~~~~~~~-  656 (752)
                      .  ......|++.|+|||.+.+. .++.++||||||+++|||++|+.||...........+.        ......... 
T Consensus       179 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (331)
T 4aaa_A          179 E--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP  256 (331)
T ss_dssp             -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred             c--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence            1  12235689999999999875 78999999999999999999999997654221110000        000001100 


Q ss_pred             CcccccCCCCCCCCCH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          657 KGLELIDPSLEQPCSA-----NEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       657 ~~~~~~d~~l~~~~~~-----~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .......+.+....+.     .....+.+++.+||+.||.+|||+.|++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH  307 (331)
T ss_dssp             GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            0111111111111111     123567889999999999999999999874


No 181
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=1.2e-37  Score=336.54  Aligned_cols=264  Identities=20%  Similarity=0.290  Sum_probs=199.1

Q ss_pred             cCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCc--ccHHHHHHHHHHHHhcCCCCcceeeeeeee--------C
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSG--QGIVEFKNEVRLIAKLQHTNLVRLLGCSLH--------G  498 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~  498 (752)
                      ++|.+.++||+|+||.||+|+. .+++.||||++.....  .....+.+|+.++.+++||||+++++++..        +
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            5788899999999999999987 4688999999865432  234567899999999999999999999877        4


Q ss_pred             CeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceeccccc
Q 043278          499 EERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGM  578 (752)
Q Consensus       499 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgl  578 (752)
                      +..++||||+++ +|...+...  ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+
T Consensus        97 ~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~  170 (351)
T 3mi9_A           97 GSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGL  170 (351)
T ss_dssp             CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             ceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchh
Confidence            468999999985 666666432  345999999999999999999999998   99999999999999999999999999


Q ss_pred             ceeeccccc--ccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhC
Q 043278          579 ARIFEVNES--EANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSD  655 (752)
Q Consensus       579 a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  655 (752)
                      ++.+.....  ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||........   ..........
T Consensus       171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~i~~~~~~  247 (351)
T 3mi9_A          171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ---LALISQLCGS  247 (351)
T ss_dssp             CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCC
T ss_pred             cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCC
Confidence            987653221  122234578999999999876 5689999999999999999999999976542211   1111111111


Q ss_pred             CC---cccc--------cCCCCCCCCCH-HH------HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          656 GK---GLEL--------IDPSLEQPCSA-NE------VMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       656 ~~---~~~~--------~d~~l~~~~~~-~~------~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ..   ....        +.......... +.      ...+.+|+.+||+.||++|||+.|+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          248 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            00   0000        00000000111 11      1346789999999999999999999885


No 182
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=1.3e-37  Score=331.42  Aligned_cols=266  Identities=23%  Similarity=0.339  Sum_probs=199.4

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      .++|.+.+.||+|+||.||+|+..+  .+|+|++....  ......+.+|+.++.+++|+||+++++++.+.+..++|||
T Consensus        32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e  109 (319)
T 2y4i_B           32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS  109 (319)
T ss_dssp             CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred             HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence            4688899999999999999998754  59999987542  2334567889999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNE  586 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~  586 (752)
                      |+++++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++ ++.+||+|||+++......
T Consensus       110 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~  183 (319)
T 2y4i_B          110 LCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ  183 (319)
T ss_dssp             CCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred             cccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence            99999999998543  345899999999999999999999998   99999999999998 6799999999987653221


Q ss_pred             ---cccccccccccCCccChhhhcc---------CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhh
Q 043278          587 ---SEANTKRIVGTYGYMSPEYAMS---------GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLS  654 (752)
Q Consensus       587 ---~~~~~~~~~gt~~y~aPE~~~~---------~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~  654 (752)
                         .........|++.|+|||.+..         ..++.++||||||+++|||++|+.||......       .......
T Consensus       184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~  256 (319)
T 2y4i_B          184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-------AIIWQMG  256 (319)
T ss_dssp             ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-------HHHHHHH
T ss_pred             ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHhc
Confidence               1122233568999999999874         45889999999999999999999999754421       1112222


Q ss_pred             CCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCCCCCCCCCCCc
Q 043278          655 DGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNETMPLPPPKQPA  717 (752)
Q Consensus       655 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~~~~p~~~~  717 (752)
                      .+.........    .    ...+.+++.+||+.||.+|||+.|++++|+.+.........|+
T Consensus       257 ~~~~~~~~~~~----~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~~~  311 (319)
T 2y4i_B          257 TGMKPNLSQIG----M----GKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHPG  311 (319)
T ss_dssp             TTCCCCCCCSS----C----CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----------
T ss_pred             cCCCCCCCcCC----C----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCCCCc
Confidence            22222111111    1    1246788999999999999999999999998765444434333


No 183
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=2.5e-37  Score=326.40  Aligned_cols=253  Identities=22%  Similarity=0.380  Sum_probs=199.6

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYEF  507 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~  507 (752)
                      .++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+|+.++.+++||||+++++++..++..++||||
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   97 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF   97 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence            468889999999999999999975 4889999999877777788899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccccc
Q 043278          508 MPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNES  587 (752)
Q Consensus       508 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~  587 (752)
                      +++++|..++....  ..+++..+..++.||+.||.|||+.+   ++||||||+|||++.++.+||+|||++....... 
T Consensus        98 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-  171 (302)
T 2j7t_A           98 CPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-  171 (302)
T ss_dssp             CTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-
T ss_pred             CCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccccc-
Confidence            99999999886532  34899999999999999999999998   9999999999999999999999999976432111 


Q ss_pred             ccccccccccCCccChhhh-----ccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCccccc
Q 043278          588 EANTKRIVGTYGYMSPEYA-----MSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       588 ~~~~~~~~gt~~y~aPE~~-----~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  662 (752)
                       .......|++.|+|||.+     ....++.++||||||+++|||++|+.|+.....      .......... ......
T Consensus       172 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~-~~~~~~  243 (302)
T 2j7t_A          172 -QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKS-DPPTLL  243 (302)
T ss_dssp             -HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHS-CCCCCS
T ss_pred             -cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH------HHHHHHHhcc-CCcccC
Confidence             112235689999999998     367789999999999999999999999875442      1111122211 111111


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .       +......+.+++.+|++.||.+|||+.|++++
T Consensus       244 ~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          244 T-------PSKWSVEFRDFLKIALDKNPETRPSAAQLLEH  276 (302)
T ss_dssp             S-------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred             C-------ccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            1       11122457789999999999999999999764


No 184
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=1.3e-37  Score=325.85  Aligned_cols=246  Identities=22%  Similarity=0.289  Sum_probs=199.5

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  504 (752)
                      .++|.+.+.||+|+||.||+++.. +++.||||++....  .....++.+|+..+.++ +||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            467889999999999999999875 68999999987642  33456788999999999 999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC----------------
Q 043278          505 YEFMPNKSLDFFLFNSGR-KNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD----------------  567 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~----------------  567 (752)
                      |||+++++|.+++..... ...+++..+..++.||+.||+|||+++   |+||||||+|||++.                
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~  166 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDW  166 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-----------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccc
Confidence            999999999999865322 245899999999999999999999998   999999999999984                


Q ss_pred             ---CCCceecccccceeecccccccccccccccCCccChhhhccC-CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 043278          568 ---KMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSG-IVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPL  643 (752)
Q Consensus       568 ---~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~  643 (752)
                         ...+||+|||++.......      ...||+.|+|||.+.+. .++.++||||||++++||++|++++....     
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----  235 (289)
T 1x8b_A          167 ASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-----  235 (289)
T ss_dssp             ---CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-----
T ss_pred             cCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-----
Confidence               4479999999998654322      24589999999999876 67789999999999999999987753321     


Q ss_pred             chHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          644 NLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       644 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                           ....+..+....+     ....    ...+.+++.+|++.||.+|||+.|++++
T Consensus       236 -----~~~~~~~~~~~~~-----~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          236 -----QWHEIRQGRLPRI-----PQVL----SQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             -----HHHHHHTTCCCCC-----SSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             -----HHHHHHcCCCCCC-----Cccc----CHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence                 1222333322211     1111    2356788999999999999999999874


No 185
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-37  Score=335.50  Aligned_cols=266  Identities=23%  Similarity=0.294  Sum_probs=197.1

Q ss_pred             HHhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCccc-----HHHHHHHHHHHHhcCCCCcceeeeeeeeCCe
Q 043278          427 AAANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQG-----IVEFKNEVRLIAKLQHTNLVRLLGCSLHGEE  500 (752)
Q Consensus       427 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  500 (752)
                      ...++|.+.+.||+|+||.||+++.. +++.||||++.......     ...+.+|+.++.+++||||+++++++.+.+.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            34578999999999999999999975 58899999997542211     2367899999999999999999999999999


Q ss_pred             eEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccce
Q 043278          501 RLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMAR  580 (752)
Q Consensus       501 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~  580 (752)
                      .++||||+++ +|..++..  ....+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus        87 ~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK  160 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred             eEEEEEcCCC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccce
Confidence            9999999986 78777754  2345889999999999999999999998   9999999999999999999999999998


Q ss_pred             eecccccccccccccccCCccChhhhccC-CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcc
Q 043278          581 IFEVNESEANTKRIVGTYGYMSPEYAMSG-IVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGL  659 (752)
Q Consensus       581 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  659 (752)
                      ......  .......+|+.|+|||.+.+. .++.++||||||+++|||++|.+||......   ................
T Consensus       161 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~---~~~~~i~~~~~~~~~~  235 (346)
T 1ua2_A          161 SFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL---DQLTRIFETLGTPTEE  235 (346)
T ss_dssp             TTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCCCCTT
T ss_pred             eccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH---HHHHHHHHHcCCCChh
Confidence            654322  122345789999999998764 5899999999999999999999998765421   1111111111111000


Q ss_pred             ---c------ccCCCCCCCCCH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 043278          660 ---E------LIDPSLEQPCSA-----NEVMRCIHVGLLCVQDQAMDRPTMPEVVCML  703 (752)
Q Consensus       660 ---~------~~d~~l~~~~~~-----~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L  703 (752)
                         .      .+........+.     .....+.+++.+|++.||.+|||+.|++++-
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~  293 (346)
T 1ua2_A          236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK  293 (346)
T ss_dssp             TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred             hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence               0      000000001111     1125678899999999999999999999864


No 186
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=4.4e-38  Score=336.65  Aligned_cols=262  Identities=21%  Similarity=0.281  Sum_probs=193.3

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc--ccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG--QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      ..++|.+.++||+|+||+||+++.. +++.||||++.....  .....+.+|+.++.+++||||+++++++.+++..++|
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            4568999999999999999999864 688999999975532  2245678999999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEec-----CCCCceecccccc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLD-----DKMNPKISDFGMA  579 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~-----~~~~~kl~DFgla  579 (752)
                      |||++ ++|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++     +++.+||+|||++
T Consensus       112 ~e~~~-~~L~~~~~~~---~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a  184 (329)
T 3gbz_A          112 FEYAE-NDLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLA  184 (329)
T ss_dssp             EECCS-EEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred             EecCC-CCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence            99998 5898888653   34899999999999999999999998   99999999999994     5556999999999


Q ss_pred             eeecccccccccccccccCCccChhhhccC-CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCc
Q 043278          580 RIFEVNESEANTKRIVGTYGYMSPEYAMSG-IVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKG  658 (752)
Q Consensus       580 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  658 (752)
                      +......  .......+|+.|+|||++.+. .++.++|||||||++|||++|+.||.......   ..............
T Consensus       185 ~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~~~~~~~~~~  259 (329)
T 3gbz_A          185 RAFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID---QLFKIFEVLGLPDD  259 (329)
T ss_dssp             HHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCT
T ss_pred             cccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH---HHHHHHHHhCCCch
Confidence            8654322  122335679999999999874 58999999999999999999999997654221   11111111111000


Q ss_pred             cc------c-----cCCCCCCCCCHH------HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          659 LE------L-----IDPSLEQPCSAN------EVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       659 ~~------~-----~d~~l~~~~~~~------~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ..      .     ..+.... ....      ....+.+|+.+||+.||.+|||+.|++++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  319 (329)
T 3gbz_A          260 TTWPGVTALPDWKQSFPKFRG-KTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH  319 (329)
T ss_dssp             TTSTTGGGSTTCCTTCCCCCC-CCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hhhhhhhhhhhhhhhhhhhcc-ccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence            00      0     0000000 0011      12456789999999999999999999873


No 187
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=5.8e-37  Score=320.80  Aligned_cols=246  Identities=22%  Similarity=0.309  Sum_probs=202.6

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ++|.+.+.||+|+||.||+++.. +++.||+|++....   ......+.+|+.++.+++||||+++++++.+++..++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            57888899999999999999875 57789999986431   234567899999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      ||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++......
T Consensus        94 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~  167 (284)
T 2vgo_A           94 EFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL  167 (284)
T ss_dssp             CCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred             EeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence            999999999998654   34899999999999999999999988   999999999999999999999999999764422


Q ss_pred             ccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCC
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPS  665 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~  665 (752)
                      .    .....|++.|+|||.+.+..++.++||||||++++||++|+.||.....      ... ...+....      ..
T Consensus       168 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~-~~~~~~~~------~~  230 (284)
T 2vgo_A          168 R----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH------TET-HRRIVNVD------LK  230 (284)
T ss_dssp             C----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHH-HHHHHTTC------CC
T ss_pred             c----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH------hHH-HHHHhccc------cC
Confidence            1    2345789999999999999999999999999999999999999965431      111 11121111      11


Q ss_pred             CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          666 LEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       666 l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      +..    .....+.+++.+|++.||.+|||+.|++++
T Consensus       231 ~~~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          231 FPP----FLSDGSKDLISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             CCT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred             CCC----cCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence            111    122356789999999999999999999874


No 188
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=1.3e-37  Score=344.10  Aligned_cols=253  Identities=23%  Similarity=0.328  Sum_probs=191.9

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--------cccHHHHHHHHHHHHhcCCCCcceeeeeeeeC
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--------GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG  498 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  498 (752)
                      ..++|.+.++||+|+||.||+|... +++.||||++....        ......+.+|+.++.+++||||+++++++. .
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~  211 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A  211 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence            4678999999999999999999864 57899999986532        112234789999999999999999999975 4


Q ss_pred             CeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCC---CCceecc
Q 043278          499 EERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDK---MNPKISD  575 (752)
Q Consensus       499 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~---~~~kl~D  575 (752)
                      +..++||||+++|+|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.+   ..+||+|
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~D  285 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITD  285 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred             CceEEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEee
Confidence            567999999999999888753   345899999999999999999999998   9999999999999654   4599999


Q ss_pred             cccceeecccccccccccccccCCccChhhhcc---CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHH
Q 043278          576 FGMARIFEVNESEANTKRIVGTYGYMSPEYAMS---GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQL  652 (752)
Q Consensus       576 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~  652 (752)
                      ||+++.....   .......||+.|+|||++.+   ..++.++||||||+++|||++|+.||........  +.    ..
T Consensus       286 FG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~----~~  356 (419)
T 3i6u_A          286 FGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LK----DQ  356 (419)
T ss_dssp             SSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HH----HH
T ss_pred             cccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HH----HH
Confidence            9999875432   12234678999999999863   6788999999999999999999999976543221  11    11


Q ss_pred             hhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          653 LSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       653 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      +..+.....  +...    ......+.+++.+||+.||.+|||+.|++++
T Consensus       357 i~~~~~~~~--~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          357 ITSGKYNFI--PEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             HHTTCCCCC--HHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HhcCCCCCC--chhh----cccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            222211100  0000    0113457789999999999999999999874


No 189
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=4.7e-38  Score=330.06  Aligned_cols=258  Identities=26%  Similarity=0.368  Sum_probs=197.1

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec--CCc--eeEEEEcccC---CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA--DEQ--EVAIKRLSRS---SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEER  501 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~--~~~--~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  501 (752)
                      .++|++.+.||+|+||.||+|+..  +++  .||||+++..   .....+++.+|+.++.+++||||+++++++...+ .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            357888999999999999999853  233  5899998754   2334567899999999999999999999998765 8


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                      ++||||+++++|.+++...  ...+++..+..++.||+.||.|||+.+   |+|+||||+|||++.++.+||+|||++..
T Consensus        96 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~  170 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRA  170 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             eeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEcccccccc
Confidence            8999999999999998653  245899999999999999999999998   99999999999999999999999999987


Q ss_pred             ecccccc-cccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcc
Q 043278          582 FEVNESE-ANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGL  659 (752)
Q Consensus       582 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  659 (752)
                      ....... .......++..|+|||.+.+..++.++||||||+++|||++ |+.||......      .........+...
T Consensus       171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~~  244 (291)
T 1u46_A          171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------QILHKIDKEGERL  244 (291)
T ss_dssp             CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTSCCCC
T ss_pred             ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH------HHHHHHHccCCCC
Confidence            6543221 12233567788999999999899999999999999999999 99998755421      1111222221111


Q ss_pred             cccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcCC
Q 043278          660 ELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNET  707 (752)
Q Consensus       660 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~  707 (752)
                      .         .+......+.+++.+|++.||.+|||+.++++.|+...
T Consensus       245 ~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          245 P---------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             C---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             C---------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            1         11122345778999999999999999999999998764


No 190
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=6.1e-38  Score=331.12  Aligned_cols=262  Identities=25%  Similarity=0.379  Sum_probs=186.7

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ..++|.+.+.||+|+||.||++... +++.||||++.... .....++.+|+.++.+++||||+++++++...+..++||
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence            3478999999999999999999864 68899999986543 334567889999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhc-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccce
Q 043278          506 EFMPNKSLDFFLFNS-----GRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMAR  580 (752)
Q Consensus       506 E~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~  580 (752)
                      ||+++++|.+++...     .....+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++.
T Consensus        93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~  169 (303)
T 2vwi_A           93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSA  169 (303)
T ss_dssp             ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred             hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchh
Confidence            999999999988641     12456899999999999999999999998   9999999999999999999999999997


Q ss_pred             eeccccc---ccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCC
Q 043278          581 IFEVNES---EANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDG  656 (752)
Q Consensus       581 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  656 (752)
                      .......   ........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||.......   ..   .......
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~---~~~~~~~  243 (303)
T 2vwi_A          170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK---VL---MLTLQND  243 (303)
T ss_dssp             HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG---HH---HHHHTSS
T ss_pred             eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh---HH---HHHhccC
Confidence            6543221   111234578999999999876 578999999999999999999999997654221   11   1111111


Q ss_pred             C--c-ccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          657 K--G-LELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       657 ~--~-~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .  . ....++......    ...+.+++.+||+.||.+|||+.|+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~h  288 (303)
T 2vwi_A          244 PPSLETGVQDKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELLRH  288 (303)
T ss_dssp             CCCTTC-----CCCCCC----CHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             CCccccccccchhhhhh----hHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            0  0 011111111122    2356788999999999999999999874


No 191
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=2.9e-37  Score=334.69  Aligned_cols=200  Identities=25%  Similarity=0.342  Sum_probs=175.2

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      .++|.+.+.||+|+||.||++... +++.||+|++.... ......+.+|+.++.+++||||+++++++.+++..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            467888999999999999999875 58899999987653 3345678999999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKY-SRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      |+++++|.+++...   ..+++..+..++.|++.||+|||+. +   |+||||||+|||++.++.+||+|||++......
T Consensus       112 ~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  185 (360)
T 3eqc_A          112 HMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  185 (360)
T ss_dssp             CCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred             CCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence            99999999999654   3489999999999999999999985 6   999999999999999999999999999754321


Q ss_pred             ccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHH  638 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~  638 (752)
                          ......||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus       186 ----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  234 (360)
T 3eqc_A          186 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD  234 (360)
T ss_dssp             ----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred             ----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                2234578999999999999999999999999999999999999997643


No 192
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=3.4e-37  Score=345.20  Aligned_cols=195  Identities=23%  Similarity=0.375  Sum_probs=153.6

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeC-----Ce
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG-----EE  500 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  500 (752)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++....  ....+++.+|+.++.+++|+||+++++++...     ..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            368999999999999999999865 68899999986542  33456788999999999999999999998543     56


Q ss_pred             eEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccce
Q 043278          501 RLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMAR  580 (752)
Q Consensus       501 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~  580 (752)
                      .++||||+. ++|..++..   ...+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++
T Consensus       132 ~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~  204 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLAR  204 (458)
T ss_dssp             EEEEECCCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             EEEEEeccc-cchhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccch
Confidence            899999985 788888753   345999999999999999999999998   9999999999999999999999999998


Q ss_pred             eecccccc-------------------------cccccccccCCccChhhh-ccCCCCccchhHHHHHHHHHHHhC
Q 043278          581 IFEVNESE-------------------------ANTKRIVGTYGYMSPEYA-MSGIVSIKTDVFSFGVLVLEIVSG  630 (752)
Q Consensus       581 ~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~t~k~DV~S~G~vl~elltG  630 (752)
                      ........                         .......||+.|+|||++ ....++.++|||||||+||||++|
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            75422110                         112345789999999986 456799999999999999999993


No 193
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=7.9e-38  Score=340.52  Aligned_cols=254  Identities=10%  Similarity=0.018  Sum_probs=180.7

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc---ccHHHHHHHHHHHHhc--CCCCcceee-------eeee
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG---QGIVEFKNEVRLIAKL--QHTNLVRLL-------GCSL  496 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~~  496 (752)
                      ..|...+.||+|+||.||+|+.. +++.||||++.....   .....+.+|+.++..+  +||||++++       +++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            45778899999999999999965 688999999987543   2345577885544444  699988755       3332


Q ss_pred             eC-----------------CeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCcE
Q 043278          497 HG-----------------EERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKR------FIIIEGISQGLLYLHKYSRLRV  553 (752)
Q Consensus       497 ~~-----------------~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~~~i  553 (752)
                      ..                 ...+|||||++ |+|.+++.....  .+.+..+      +.++.||+.||+|||+++   |
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---i  215 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSKG---L  215 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---C
Confidence            22                 34799999999 899999975422  2455555      788899999999999998   9


Q ss_pred             eecCCCCCcEEecCCCCceecccccceeecccccccccccccccCCccChhhhcc--CCCCccchhHHHHHHHHHHHhCC
Q 043278          554 IHRDLKASNILLDDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMS--GIVSIKTDVFSFGVLVLEIVSGQ  631 (752)
Q Consensus       554 iH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~k~DV~S~G~vl~elltG~  631 (752)
                      +||||||+||||+.++.+||+|||+++......     ....+|+.|+|||++.+  ..++.++|||||||++|||++|+
T Consensus       216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~  290 (371)
T 3q60_A          216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF  290 (371)
T ss_dssp             EETTCSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred             ccCcCCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence            999999999999999999999999998654221     13456799999999987  78999999999999999999999


Q ss_pred             CCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          632 KNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       632 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .||....+......        ............+..+........+.+++.+||+.||++|||+.|++++
T Consensus       291 ~Pf~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  353 (371)
T 3q60_A          291 LPFGLVTPGIKGSW--------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET  353 (371)
T ss_dssp             CSTTBCCTTCTTCC--------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred             CCCCCcCcccccch--------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            99987653321100        0000000011111111111223467789999999999999999999753


No 194
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=1.6e-36  Score=319.80  Aligned_cols=268  Identities=24%  Similarity=0.315  Sum_probs=202.0

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      ++|++.+.||+|+||.||+|+.. +++.||||++....  ......+.+|+.++.+++||||+++++++..++..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            57888899999999999999875 68899999986543  2234678899999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNE  586 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~  586 (752)
                      |++ ++|.+++.... ...+++..+..++.||+.||+|||+.+   |+||||||+||+++.++.+||+|||++.......
T Consensus        83 ~~~-~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~  157 (299)
T 2r3i_A           83 FLH-QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  157 (299)
T ss_dssp             CCS-EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred             ccc-CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence            998 69988886543 245899999999999999999999998   9999999999999999999999999997654322


Q ss_pred             cccccccccccCCccChhhhccCC-CCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCc------c
Q 043278          587 SEANTKRIVGTYGYMSPEYAMSGI-VSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKG------L  659 (752)
Q Consensus       587 ~~~~~~~~~gt~~y~aPE~~~~~~-~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~------~  659 (752)
                      .  ......+++.|+|||.+.+.. ++.++||||||+++|||++|+.||.......   ......+.......      .
T Consensus       158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  232 (299)
T 2r3i_A          158 R--TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID---QLFRIFRTLGTPDEVVWPGVT  232 (299)
T ss_dssp             B--CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGG
T ss_pred             c--ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHHHHhCCCchhhhhHhh
Confidence            1  122356799999999998765 8999999999999999999999997654211   11111111111000      0


Q ss_pred             --cccCCCCCCC--CC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--hhcCC
Q 043278          660 --ELIDPSLEQP--CS-----ANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM--LQNET  707 (752)
Q Consensus       660 --~~~d~~l~~~--~~-----~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~~  707 (752)
                        ....+.+...  ..     ......+.+++.+|++.||++|||+.|++++  +++..
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~~  291 (299)
T 2r3i_A          233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT  291 (299)
T ss_dssp             GSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             cCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcCC
Confidence              0000111000  00     0112456789999999999999999999983  55443


No 195
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=2.1e-37  Score=331.12  Aligned_cols=258  Identities=20%  Similarity=0.270  Sum_probs=202.7

Q ss_pred             HHHHhcCCCcC-CeeecCCcccEEEEEec-CCceeEEEEcccC--CcccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCC
Q 043278          425 IAAAANNFSTT-NKLGEGGFGPVYKGKLA-DEQEVAIKRLSRS--SGQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGE  499 (752)
Q Consensus       425 i~~~~~~~~~~-~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  499 (752)
                      .....+.|.+. +.||+|+||.||++... +++.||+|++...  ......++.+|+.++.++ +||||+++++++.+.+
T Consensus        23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~  102 (327)
T 3lm5_A           23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS  102 (327)
T ss_dssp             HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence            34455677776 88999999999999875 5889999998754  334567889999999999 5699999999999999


Q ss_pred             eeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC---CCCceeccc
Q 043278          500 ERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD---KMNPKISDF  576 (752)
Q Consensus       500 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~---~~~~kl~DF  576 (752)
                      ..++||||+++|+|.+++... ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.   ++.+||+||
T Consensus       103 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Df  178 (327)
T 3lm5_A          103 EIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDF  178 (327)
T ss_dssp             EEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred             eEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeC
Confidence            999999999999999988542 2356999999999999999999999998   999999999999987   789999999


Q ss_pred             ccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCC
Q 043278          577 GMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDG  656 (752)
Q Consensus       577 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~  656 (752)
                      |+++......   ......||+.|+|||++.+..++.++||||||+++|||++|+.||......      ....... ..
T Consensus       179 g~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~-~~  248 (327)
T 3lm5_A          179 GMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ------ETYLNIS-QV  248 (327)
T ss_dssp             GGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHH-HT
T ss_pred             ccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch------HHHHHHH-hc
Confidence            9998764322   123357899999999999999999999999999999999999999665421      1111111 11


Q ss_pred             CcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          657 KGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       657 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .. .     ............+.+++.+||+.||.+|||++|+++.
T Consensus       249 ~~-~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          249 NV-D-----YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             CC-C-----CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             cc-c-----cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence            10 0     0011111223457788999999999999999999875


No 196
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=2.3e-36  Score=327.99  Aligned_cols=258  Identities=20%  Similarity=0.309  Sum_probs=205.4

Q ss_pred             HHHHHHhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcc--------cHHHHHHHHHHHHhc-CCCCcceee
Q 043278          423 QTIAAAANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQ--------GIVEFKNEVRLIAKL-QHTNLVRLL  492 (752)
Q Consensus       423 ~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~l~  492 (752)
                      .......++|.+.+.||+|+||.||+|+.. +|+.||||++......        ....+.+|+.++.++ +||||++++
T Consensus        87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~  166 (365)
T 2y7j_A           87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI  166 (365)
T ss_dssp             HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred             hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence            344555678999999999999999999985 6899999998654321        134678999999999 899999999


Q ss_pred             eeeeeCCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCce
Q 043278          493 GCSLHGEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPK  572 (752)
Q Consensus       493 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~k  572 (752)
                      +++......++||||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+|+||||+|||++.++.+|
T Consensus       167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ik  240 (365)
T 2y7j_A          167 DSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIR  240 (365)
T ss_dssp             EEEEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEE
T ss_pred             EEEeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEE
Confidence            9999999999999999999999998643   35899999999999999999999998   99999999999999999999


Q ss_pred             ecccccceeecccccccccccccccCCccChhhhcc------CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchH
Q 043278          573 ISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMS------GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLI  646 (752)
Q Consensus       573 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~  646 (752)
                      |+|||++..+....   ......||+.|+|||++.+      ..++.++||||||+++|||++|+.||......      
T Consensus       241 l~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~------  311 (365)
T 2y7j_A          241 LSDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI------  311 (365)
T ss_dssp             ECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------
T ss_pred             EEecCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH------
Confidence            99999998765332   2234678999999999863      36889999999999999999999999654311      


Q ss_pred             HHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          647 GYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       647 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      . ....+..+.... ..+.. .    .....+.+++.+|++.||++|||+.|+++.
T Consensus       312 ~-~~~~i~~~~~~~-~~~~~-~----~~~~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          312 L-MLRMIMEGQYQF-SSPEW-D----DRSSTVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             H-HHHHHHHTCCCC-CHHHH-S----SSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             H-HHHHHHhCCCCC-CCccc-c----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            1 111121111100 00000 0    112357789999999999999999999874


No 197
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=1.5e-37  Score=337.09  Aligned_cols=270  Identities=21%  Similarity=0.261  Sum_probs=199.8

Q ss_pred             cHHHHHHHhcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcc-----------cHHHHHHHHHHHHhcCCCCcc
Q 043278          421 DFQTIAAAANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQ-----------GIVEFKNEVRLIAKLQHTNLV  489 (752)
Q Consensus       421 ~~~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~-----------~~~~~~~E~~~l~~l~h~niv  489 (752)
                      ...++....++|.+.+.||+|+||.||+|...+++.||||++......           ....+.+|+.++.+++||||+
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   92 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL   92 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence            456778889999999999999999999999888999999998653221           136789999999999999999


Q ss_pred             eeeeeeee-----CCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEE
Q 043278          490 RLLGCSLH-----GEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNIL  564 (752)
Q Consensus       490 ~l~~~~~~-----~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIl  564 (752)
                      ++++++..     ....++||||++ |+|.+++..  ....+++..+..++.||+.||.|||+.+   |+||||||+|||
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl  166 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNIL  166 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEE
T ss_pred             ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEE
Confidence            99999854     336799999998 677777753  3346999999999999999999999998   999999999999


Q ss_pred             ecCCCCceecccccceeecccccccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 043278          565 LDDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPL  643 (752)
Q Consensus       565 l~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~  643 (752)
                      ++.++.+||+|||+++......   ......+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||.......  
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--  241 (362)
T 3pg1_A          167 LADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN--  241 (362)
T ss_dssp             ECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--
T ss_pred             EcCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH--
Confidence            9999999999999997543222   2234578899999999887 679999999999999999999999997654211  


Q ss_pred             chHHHHHHHhhCCCcc-----------cccCCCCCC-------CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          644 NLIGYAWQLLSDGKGL-----------ELIDPSLEQ-------PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       644 ~l~~~~~~~~~~~~~~-----------~~~d~~l~~-------~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                       ...............           ..+...+..       .........+.+++.+|++.||.+|||+.|++++
T Consensus       242 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          242 -QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             -HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence             111111111110000           000000000       0001112457789999999999999999999875


No 198
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.7e-36  Score=322.03  Aligned_cols=252  Identities=24%  Similarity=0.356  Sum_probs=199.9

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      ..++|.+.+.||+|+||.||+|... +++.||||.+....  ...++.+|+.++.+++||||+++++++.+.+..++|||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            4578999999999999999999875 48899999997643  34678999999999999999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNE  586 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~  586 (752)
                      |+++++|.+++...  ...+++..+..++.||+.||.|||+.+   ++|+||||+||+++.++.+||+|||++.......
T Consensus       105 ~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  179 (314)
T 3com_A          105 YCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM  179 (314)
T ss_dssp             CCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred             cCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence            99999999998642  345899999999999999999999998   9999999999999999999999999998754332


Q ss_pred             cccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCC
Q 043278          587 SEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSL  666 (752)
Q Consensus       587 ~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l  666 (752)
                      .  ......|++.|+|||.+.+..++.++||||||+++|||++|+.||......      ....... ......+..   
T Consensus       180 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~-~~~~~~~~~---  247 (314)
T 3com_A          180 A--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM------RAIFMIP-TNPPPTFRK---  247 (314)
T ss_dssp             S--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHH-HSCCCCCSS---
T ss_pred             c--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHh-cCCCcccCC---
Confidence            1  223357899999999999999999999999999999999999999754311      1111111 111111111   


Q ss_pred             CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          667 EQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       667 ~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                          +......+.+++.+|++.||.+|||+.|+++.
T Consensus       248 ----~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          248 ----PELWSDNFTDFVKQCLVKSPEQRATATQLLQH  279 (314)
T ss_dssp             ----GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             ----cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence                11122457789999999999999999999874


No 199
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=5.6e-37  Score=319.35  Aligned_cols=247  Identities=22%  Similarity=0.355  Sum_probs=195.1

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ++|.+.+.||+|+||.||+|+.. +++.||||++....   ......+.+|+.++.+++||||+++++++.+.+..++||
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM   90 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence            57888999999999999999975 68899999986532   234567899999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      ||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+|+||||+|||++.++.+||+|||++......
T Consensus        91 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~  164 (276)
T 2h6d_A           91 EYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  164 (276)
T ss_dssp             ECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred             eccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence            999999999998654   34899999999999999999999998   999999999999999999999999999865432


Q ss_pred             ccccccccccccCCccChhhhccCCC-CccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          586 ESEANTKRIVGTYGYMSPEYAMSGIV-SIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~~~~~-t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                      .   ......+++.|+|||.+.+..+ +.++||||||++++||++|+.||.....       ......+..+..      
T Consensus       165 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~~------  228 (276)
T 2h6d_A          165 E---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-------PTLFKKIRGGVF------  228 (276)
T ss_dssp             ---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCC------
T ss_pred             c---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-------HHHHHHhhcCcc------
Confidence            2   1223568899999999988765 6899999999999999999999865431       111122222111      


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .+...    ....+.+++.+|++.||.+|||+.|++++
T Consensus       229 ~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          229 YIPEY----LNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             CCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             cCchh----cCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            01011    12356788999999999999999999985


No 200
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=1.6e-37  Score=340.62  Aligned_cols=260  Identities=22%  Similarity=0.306  Sum_probs=196.0

Q ss_pred             cCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCC------eeEE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGE------ERLL  503 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~l  503 (752)
                      .+|...+.||+|+||.||+|+...+..+|+|++......    ..+|+.+++.++||||+++++++....      ..++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            468889999999999999999877777999988654322    247999999999999999999986543      3789


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEec-CCCCceecccccceee
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLD-DKMNPKISDFGMARIF  582 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~-~~~~~kl~DFgla~~~  582 (752)
                      ||||++++.+............+++..+..++.||++||+|||+.+   |+||||||+||||+ .++.+||+|||+++..
T Consensus       116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~  192 (394)
T 4e7w_A          116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL  192 (394)
T ss_dssp             EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence            9999998766554433334556999999999999999999999998   99999999999999 7999999999999876


Q ss_pred             cccccccccccccccCCccChhhhccC-CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCC-----
Q 043278          583 EVNESEANTKRIVGTYGYMSPEYAMSG-IVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDG-----  656 (752)
Q Consensus       583 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~-----  656 (752)
                      .....   .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.........   ....+.+...     
T Consensus       193 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l---~~i~~~~g~p~~~~~  266 (394)
T 4e7w_A          193 IAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQL---VEIIKVLGTPSREQI  266 (394)
T ss_dssp             CTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HHHHHHHCCCCHHHH
T ss_pred             cCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCCCHHHH
Confidence            43322   2245789999999998765 5999999999999999999999999775422111   1111111000     


Q ss_pred             -----CcccccCCCCCC-----CCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          657 -----KGLELIDPSLEQ-----PCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       657 -----~~~~~~d~~l~~-----~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                           ...+..-+....     .........+.+|+.+||+.||.+|||+.|++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence                 000000011100     0111123467889999999999999999999986


No 201
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-37  Score=338.35  Aligned_cols=261  Identities=23%  Similarity=0.299  Sum_probs=195.7

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCC------
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGE------  499 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  499 (752)
                      .++|...+.||+|+||.||+|.. .+|+.||||++....  .....++.+|+.++++++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46788999999999999999987 468999999996542  233457889999999999999999999987653      


Q ss_pred             eeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccc
Q 043278          500 ERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMA  579 (752)
Q Consensus       500 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla  579 (752)
                      ..++||||+ +++|..++..    ..+++..+..++.||++||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a  175 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA  175 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeecc
Confidence            459999999 7899998854    35899999999999999999999998   999999999999999999999999999


Q ss_pred             eeecccccccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCC-
Q 043278          580 RIFEVNESEANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGK-  657 (752)
Q Consensus       580 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~-  657 (752)
                      +.....     .....+|+.|+|||++.+ ..++.++||||+||+++||++|+.||.......   ............. 
T Consensus       176 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~l~~i~~~~g~~~~  247 (367)
T 1cm8_A          176 RQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD---QLKEIMKVTGTPPA  247 (367)
T ss_dssp             EECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCH
T ss_pred             cccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCCH
Confidence            865422     234578999999999887 789999999999999999999999997654221   1111111100000 


Q ss_pred             -----------------cccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH--hhcC
Q 043278          658 -----------------GLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM--LQNE  706 (752)
Q Consensus       658 -----------------~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~  706 (752)
                                       ........+. .........+.+|+.+|++.||.+|||+.|++++  ++..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~  314 (367)
T 1cm8_A          248 EFVQRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  314 (367)
T ss_dssp             HHHHTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HHHHHhhhHHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence                             0000000000 0011123457788999999999999999999985  5544


No 202
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=1.9e-36  Score=317.91  Aligned_cols=250  Identities=24%  Similarity=0.359  Sum_probs=197.4

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccC--CcccHHHHHHHHHHHHhcCCCCcceeeeeeee----CCeeE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRS--SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLH----GEERL  502 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~  502 (752)
                      +.|.+.+.||+|+||.||+|... ++..||+|.+...  .......+.+|+.++.+++||||+++++++..    +...+
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            34677789999999999999874 5778999998654  23345678999999999999999999998865    45689


Q ss_pred             EEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEec-CCCCceeccccccee
Q 043278          503 LVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLD-DKMNPKISDFGMARI  581 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~-~~~~~kl~DFgla~~  581 (752)
                      +||||+++++|.+++...   ..+++..+..++.||+.||.|||+.+ .+|+|+||||+|||++ .++.+||+|||++..
T Consensus       106 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~  181 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             EEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence            999999999999999653   45899999999999999999999875 3599999999999997 889999999999975


Q ss_pred             ecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccc
Q 043278          582 FEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLEL  661 (752)
Q Consensus       582 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  661 (752)
                      ....    ......|++.|+|||.+. ..++.++||||||+++|||++|+.||......      .........+.....
T Consensus       182 ~~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~  250 (290)
T 1t4h_A          182 KRAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA------AQIYRRVTSGVKPAS  250 (290)
T ss_dssp             CCTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH------HHHHHHHTTTCCCGG
T ss_pred             cccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH------HHHHHHHhccCCccc
Confidence            4322    223356899999999876 45899999999999999999999999654321      111222222211111


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          662 IDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       662 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .+.    .    ....+.+++..||+.||.+|||+.|++++
T Consensus       251 ~~~----~----~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          251 FDK----V----AIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             GGG----C----CCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cCC----C----CCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            111    1    12357789999999999999999999874


No 203
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=8e-37  Score=356.31  Aligned_cols=250  Identities=22%  Similarity=0.312  Sum_probs=204.2

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccC---CcccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCeeE
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRS---SGQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEERL  502 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  502 (752)
                      ..++|++.+.||+|+||.||+++.. +++.||||+++..   .......+..|..++..+ +|++|+++++++.+.+..+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            3567999999999999999999875 5788999998753   223455678899999987 7999999999999999999


Q ss_pred             EEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceee
Q 043278          503 LVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIF  582 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~  582 (752)
                      |||||+++|+|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++++||+|||+++..
T Consensus       419 lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~  492 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  492 (674)
T ss_dssp             EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred             EEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeecc
Confidence            999999999999999754   34899999999999999999999998   999999999999999999999999999854


Q ss_pred             cccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCccccc
Q 043278          583 EVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       583 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  662 (752)
                      ....  .......||+.|+|||++.+..++.++||||||++||||++|+.||......      .. .+.+..+..    
T Consensus       493 ~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~------~~-~~~i~~~~~----  559 (674)
T 3pfq_A          493 IWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------EL-FQSIMEHNV----  559 (674)
T ss_dssp             CCTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HH-HHHHHSSCC----
T ss_pred             ccCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH------HH-HHHHHhCCC----
Confidence            3222  2234578999999999999999999999999999999999999999765421      11 122222211    


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHHH
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTM-----PEVVCM  702 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~-----~ev~~~  702 (752)
                        .    .+......+.+|+..||+.||.+||++     +||+++
T Consensus       560 --~----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h  598 (674)
T 3pfq_A          560 --A----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  598 (674)
T ss_dssp             --C----CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred             --C----CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence              0    111223457789999999999999998     777653


No 204
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=1.7e-36  Score=332.88  Aligned_cols=263  Identities=24%  Similarity=0.260  Sum_probs=202.4

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHHHhcC--------CCCcceeeeeee---
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQ--------HTNLVRLLGCSL---  496 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~---  496 (752)
                      .++|.+.++||+|+||.||+|+. .+++.||||++... ......+.+|+.++.+++        |+||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            36899999999999999999986 45789999999754 334567889999999985        788999999987   


Q ss_pred             -eCCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCcEeecCCCCCcEEecCCC-----
Q 043278          497 -HGEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKY-SRLRVIHRDLKASNILLDDKM-----  569 (752)
Q Consensus       497 -~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiH~Dikp~NIll~~~~-----  569 (752)
                       .+...++||||+. ++|...+... ....+++..+..++.||+.||+|||++ +   |+||||||+||||+.++     
T Consensus       115 ~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~  189 (397)
T 1wak_A          115 VNGTHICMVFEVLG-HHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRR  189 (397)
T ss_dssp             TTEEEEEEEECCCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHH
T ss_pred             CCCceEEEEEeccC-ccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhh
Confidence             5568899999995 5555555433 234599999999999999999999998 7   99999999999998775     


Q ss_pred             --------------------------------------------CceecccccceeecccccccccccccccCCccChhh
Q 043278          570 --------------------------------------------NPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEY  605 (752)
Q Consensus       570 --------------------------------------------~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~  605 (752)
                                                                  .+||+|||+++.....     .....||+.|+|||+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~  264 (397)
T 1wak_A          190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEV  264 (397)
T ss_dssp             HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHH
T ss_pred             hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChh
Confidence                                                        8999999999875432     223578999999999


Q ss_pred             hccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHH---HHHhhC--------CCc-ccccCCC-----C--
Q 043278          606 AMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYA---WQLLSD--------GKG-LELIDPS-----L--  666 (752)
Q Consensus       606 ~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~---~~~~~~--------~~~-~~~~d~~-----l--  666 (752)
                      +.+..++.++|||||||+||||++|+.||...............   ...+..        +.. .......     +  
T Consensus       265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  344 (397)
T 1wak_A          265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK  344 (397)
T ss_dssp             HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred             hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence            99999999999999999999999999999876544322111111   111110        000 0000000     0  


Q ss_pred             ------------CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          667 ------------EQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       667 ------------~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                                  ....+......+.+|+.+||+.||++|||+.|++++
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  392 (397)
T 1wak_A          345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH  392 (397)
T ss_dssp             CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred             cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence                        012345667788999999999999999999999864


No 205
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=4e-37  Score=328.65  Aligned_cols=261  Identities=25%  Similarity=0.393  Sum_probs=199.4

Q ss_pred             ccHHHHHHHhcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHHHhc-CCCCcceeeeeeee
Q 043278          420 FDFQTIAAAANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLH  497 (752)
Q Consensus       420 ~~~~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  497 (752)
                      +++.++....++|.+.+.||+|+||.||+|+. .+++.||||++.... .....+.+|+.++.++ +||||+++++++..
T Consensus        14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            34444445678899999999999999999987 468899999986543 3456789999999999 89999999999976


Q ss_pred             ------CCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCc
Q 043278          498 ------GEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNP  571 (752)
Q Consensus       498 ------~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~  571 (752)
                            .+..++||||+++++|.+++.... ...+++..+..++.||+.||.|||+.+   |+|+||||+|||++.++.+
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~  168 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEV  168 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCE
T ss_pred             ccCccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCE
Confidence                  467899999999999999986542 346899999999999999999999998   9999999999999999999


Q ss_pred             eecccccceeecccccccccccccccCCccChhhhc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchH
Q 043278          572 KISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAM-----SGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLI  646 (752)
Q Consensus       572 kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~  646 (752)
                      ||+|||++........  ......|++.|+|||.+.     +..++.++||||||+++|||++|+.||......      
T Consensus       169 kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------  240 (326)
T 2x7f_A          169 KLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------  240 (326)
T ss_dssp             EECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------
T ss_pred             EEeeCcCceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH------
Confidence            9999999986543211  122357899999999987     567899999999999999999999998654311      


Q ss_pred             HHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          647 GYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       647 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ......... ........    .    ....+.+++.+||+.||.+|||+.|++++
T Consensus       241 ~~~~~~~~~-~~~~~~~~----~----~~~~l~~li~~~l~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          241 RALFLIPRN-PAPRLKSK----K----WSKKFQSFIESCLVKNHSQRPATEQLMKH  287 (326)
T ss_dssp             HHHHHHHHS-CCCCCSCS----C----SCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHHHHhhcC-ccccCCcc----c----cCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            111111111 11111111    1    12356788899999999999999999874


No 206
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1e-36  Score=343.75  Aligned_cols=252  Identities=26%  Similarity=0.321  Sum_probs=202.2

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccC--CcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRS--SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      ..++|.+.++||+|+||+||+++.. +++.||||++...  .......+.+|+.++.+++||||+++++++.+....++|
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   99 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence            3467999999999999999999875 6889999998643  234567889999999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEec---CCCCceeccccccee
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLD---DKMNPKISDFGMARI  581 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~---~~~~~kl~DFgla~~  581 (752)
                      |||+++++|.+.+...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++   .++.+||+|||+++.
T Consensus       100 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  173 (486)
T 3mwu_A          100 GELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC  173 (486)
T ss_dssp             ECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred             EEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence            9999999998888654   35899999999999999999999998   99999999999995   566799999999986


Q ss_pred             ecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccc
Q 043278          582 FEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLEL  661 (752)
Q Consensus       582 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  661 (752)
                      .....   ......||+.|+|||++.+ .++.++|||||||++|||++|+.||......      . ....+..+.....
T Consensus       174 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~-~~~~i~~~~~~~~  242 (486)
T 3mwu_A          174 FQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY------D-ILKRVETGKYAFD  242 (486)
T ss_dssp             BCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------H-HHHHHHHTCCCSC
T ss_pred             CCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------H-HHHHHHhCCCCCC
Confidence            54322   2234578999999998875 5999999999999999999999999765421      1 1112222211100


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          662 IDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       662 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                       .+     ........+.+++.+||+.||.+|||+.|++++
T Consensus       243 -~~-----~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          243 -LP-----QWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             -SG-----GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             -Cc-----ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence             00     011122457789999999999999999999986


No 207
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=4.5e-37  Score=347.36  Aligned_cols=251  Identities=25%  Similarity=0.341  Sum_probs=198.1

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      .++|.+.++||+|+||+||+++.. ++..||+|++....  ......+.+|+.++.+++||||+++++++.+....++||
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            457889999999999999999975 57889999987643  334567899999999999999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC---CCCceecccccceee
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD---KMNPKISDFGMARIF  582 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~---~~~~kl~DFgla~~~  582 (752)
                      ||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.   ++.+||+|||+++..
T Consensus       116 e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~  189 (494)
T 3lij_A          116 ECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF  189 (494)
T ss_dssp             ECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             ecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence            999999998888654   34899999999999999999999998   999999999999976   455999999999876


Q ss_pred             cccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCccccc
Q 043278          583 EVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELI  662 (752)
Q Consensus       583 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  662 (752)
                      ....   ......||+.|+|||++. ..++.++|||||||++|||++|+.||......       .....+..+... ..
T Consensus       190 ~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~i~~~~~~-~~  257 (494)
T 3lij_A          190 ENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-------EILRKVEKGKYT-FD  257 (494)
T ss_dssp             BTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHTCCC-CC
T ss_pred             CCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCCC-CC
Confidence            5332   223457999999999876 56999999999999999999999999765421       111222222111 11


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          663 DPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       663 d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .+.. .    .....+.+++.+||+.||.+|||+.|++++
T Consensus       258 ~~~~-~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          258 SPEW-K----NVSEGAKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             SGGG-T----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             chhc-c----cCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence            1111 1    112356788999999999999999999865


No 208
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=1e-37  Score=327.39  Aligned_cols=253  Identities=23%  Similarity=0.297  Sum_probs=185.9

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCc-cc-HHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSG-QG-IVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~-~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      .++|++.+.||+|+||.||+++. .+++.||||++..... .. ...+.++...+..++||||+++++++.+++..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            46788899999999999999987 4688999999976522 22 233445555678889999999999999999999999


Q ss_pred             eeCCCCCHhHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          506 EFMPNKSLDFFLFNS-GRKNVLNWEKRFIIIEGISQGLLYLHKY-SRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       506 E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      ||++ |+|.+++... .....+++..+..++.||+.||+|||++ +   |+||||||+|||++.++.+||+|||+++...
T Consensus        86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T 3fme_A           86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV  161 (290)
T ss_dssp             ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred             ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            9998 5887776542 2345699999999999999999999998 7   9999999999999999999999999998654


Q ss_pred             ccccccccccccccCCccChhhh----ccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcc
Q 043278          584 VNESEANTKRIVGTYGYMSPEYA----MSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGL  659 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  659 (752)
                      ....   .....||+.|+|||.+    .+..++.++||||||++++||++|+.||.....     ............. .
T Consensus       162 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~-~  232 (290)
T 3fme_A          162 DDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPS-P  232 (290)
T ss_dssp             -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCC-C
T ss_pred             cccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc-----hHHHHHHHhccCC-C
Confidence            3221   2234689999999996    566789999999999999999999999965321     1111122222211 1


Q ss_pred             cccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          660 ELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       660 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ....        ......+.+++.+|++.||++|||+.|++++
T Consensus       233 ~~~~--------~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          233 QLPA--------DKFSAEFVDFTSQCLKKNSKERPTYPELMQH  267 (290)
T ss_dssp             CCCT--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             Cccc--------ccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence            1111        1122357788999999999999999999873


No 209
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=7.5e-37  Score=327.14  Aligned_cols=257  Identities=16%  Similarity=0.257  Sum_probs=198.8

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHHHhcC-CCCcceeeeeeee--CCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQ-HTNLVRLLGCSLH--GEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv  504 (752)
                      .++|++.++||+|+||.||+|+. .+++.||||++...   ....+.+|+.++.+++ |+||+++++++.+  ....++|
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            36788999999999999999986 56889999998743   3567899999999997 9999999999987  6678999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCC-Cceecccccceeec
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKM-NPKISDFGMARIFE  583 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~-~~kl~DFgla~~~~  583 (752)
                      |||+++++|..++.      .+++..+..++.||+.||+|||+.+   |+||||||+|||++.++ .+||+|||+++...
T Consensus       112 ~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~  182 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH  182 (330)
T ss_dssp             EECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             EeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence            99999999998873      3889999999999999999999998   99999999999999776 89999999998754


Q ss_pred             ccccccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHH---------Hh
Q 043278          584 VNESEANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQ---------LL  653 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~---------~~  653 (752)
                      ....   .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......  ........         .+
T Consensus       183 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~--~~l~~~~~~~~~~~~~~~~  257 (330)
T 3nsz_A          183 PGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY--DQLVRIAKVLGTEDLYDYI  257 (330)
T ss_dssp             TTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH--HHHHHHHHHHCHHHHHHHH
T ss_pred             CCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH--HHHHHHHHhcCCchhhhHH
Confidence            3322   233578899999999987 679999999999999999999999985443211  00100000         00


Q ss_pred             hCCCc--------------ccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          654 SDGKG--------------LELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       654 ~~~~~--------------~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .....              ...................+.+++.+||+.||.+|||++|++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          258 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             HHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            00000              00000000011111123567889999999999999999999874


No 210
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*
Probab=100.00  E-value=6.9e-38  Score=321.32  Aligned_cols=201  Identities=18%  Similarity=0.241  Sum_probs=154.4

Q ss_pred             eEeeCCCeEEeeeeCCCCCCCCccEEEEecCCCCCCcCccccCCCCCCCCCccEEeccCCCCCCCC----CceEEEecCC
Q 043278            2 LLVSAFGNFKLGFFSPASSTTTERYLGIWHDTAPDTLGWYFRPFLPRYQTDEPIWIANRNTPILDQ----SGVLTIDSID   77 (752)
Q Consensus         2 ~lvS~~g~F~lGFf~~~~~~~~~~ylgIw~~~~~~~~~~~~~~~~~~~~~~t~vWvANr~~Pv~~~----~~~l~~~~~~   77 (752)
                      .|||++|+|+||||.++     ++||   |+  |               .+ +||+||||+||.++    +++|+|+. |
T Consensus        28 ~l~S~~g~F~lgf~~~~-----~~~l---y~--~---------------~~-vvW~Anr~~p~~~~~~~~~~~l~l~~-~   80 (276)
T 3m7h_A           28 YLLSPNQRFKLLLQGDG-----NLVI---QD--N---------------GA-TVWVANEQQPFSSTIPLRNKKAPLAF-Y   80 (276)
T ss_dssp             EEECTTSSEEEEECTTS-----CEEE---EE--T---------------TE-EEEECSTTSTTEEEEECCCTTCCSEE-E
T ss_pred             EEEcCCCcEEEEEECCC-----CeEE---EC--C---------------CC-eEEECCCCCCcCCcccccceEEEEeC-C
Confidence            69999999999999432     5788   76  4               36 99999999999884    68999998 9


Q ss_pred             CcEEE--EcCCCCcEEEeeccCC-----ccccceeEecCCCeEEEEecCCCccceeEeeeccCCCcccCCCCeecccccc
Q 043278           78 GNLKI--LHNGGNPIAVSSVEGA-----SNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFDYPTDTLLPGMKLGINLQT  150 (752)
Q Consensus        78 g~L~l--~~~~g~~~~~~~~~~~-----~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd~PTDTlLpg~kl~~~~~t  150 (752)
                      |+|+|  .|++|.+||+++++..     ..++.|+|+|+|||||++       +.+||||  |||||||||||||.+.++
T Consensus        81 G~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~-------~~~lWqS--~ptdtlLpg~~~~~~l~~  151 (276)
T 3m7h_A           81 VQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD-------SLALWNG--TPAIPLVPGAIDSLLLAP  151 (276)
T ss_dssp             ESSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE-------EEEEEES--CTTSCCCCSCTTCEEECS
T ss_pred             CcEEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC-------CceeeCc--cccccccccccccccccc
Confidence            99999  8888899998876432     345689999999999997       2599999  999999999999999999


Q ss_pred             CceeEEEEecCCCCCCCCCcEEeeecCCCceeEEEecCceEEEecccccCCccccccccceEEEEEecCc-eEEEEEEcc
Q 043278          151 GHQWFLQSWLDYSSPAQGSFTLGIEPNATNQLIIRWRRETIYWTSGLLLNGNFNFSRSWNLSFSYTSNEQ-EKYFEYSLN  229 (752)
Q Consensus       151 g~~~~L~Sw~s~~dps~G~f~l~~~~~g~~~~~~~~~~~~~yw~~g~~~~~~~~~~~~~~~~~~~~~n~~-e~~~~~~~~  229 (752)
                      |+.  |   ++.+||++|.|+++|+++|  +++++++...+||++|.|+.+.....-.....+.+.++.+ ++.++++. 
T Consensus       152 g~~--L---~S~~dps~G~fsl~l~~dG--nlvLy~~~~~~yW~Sgt~~~~~~~l~l~~dGnLvl~d~~~~~vWsS~t~-  223 (276)
T 3m7h_A          152 GSE--L---VQGVVYGAGASKLVFQGDG--NLVAYGPNGAATWNAGTQGKGAVRAVFQGDGNLVVYGAGNAVLWHSHTG-  223 (276)
T ss_dssp             SEE--E---CTTCEEEETTEEEEECTTS--CEEEECTTSSEEEECCCTTTTCCEEEECTTSCEEEECTTSCEEEECSCT-
T ss_pred             Ccc--c---ccCCCCCCceEEEeecCCc--eEEEEeCCCeEEEECCCCCCccEEEEEcCCCeEEEEeCCCcEEEEecCC-
Confidence            977  6   6789999999999999998  4666665679999999987653211111122233334333 44443332 


Q ss_pred             CCceeeEEEEECCCCcccc
Q 043278          230 EGVTSSVFLRIDPEGALSD  248 (752)
Q Consensus       230 ~~~~~~~~~~l~~~G~l~~  248 (752)
                       +.. .++++|+.||+|+-
T Consensus       224 -~~~-~~rl~Ld~dGnLvl  240 (276)
T 3m7h_A          224 -GHA-SAVLRLQANGSIAI  240 (276)
T ss_dssp             -TCT-TCEEEECTTSCEEE
T ss_pred             -CCC-CEEEEEcCCccEEE
Confidence             222 24799999999864


No 211
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=1.3e-36  Score=337.50  Aligned_cols=200  Identities=25%  Similarity=0.391  Sum_probs=166.6

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeC-----Ce
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG-----EE  500 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  500 (752)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++....  .....++.+|+.++.+++|+||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            468999999999999999999875 57889999997642  33456789999999999999999999998776     57


Q ss_pred             eEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccce
Q 043278          501 RLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMAR  580 (752)
Q Consensus       501 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~  580 (752)
                      .++||||++ ++|..++..   ...+++..+..++.||++||+|||+.+   |+||||||+||||+.++.+||+|||+++
T Consensus       105 ~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~  177 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLAR  177 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEEecCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence            899999987 599888853   345999999999999999999999998   9999999999999999999999999998


Q ss_pred             eecccccc--------------------cccccccccCCccChhhh-ccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 043278          581 IFEVNESE--------------------ANTKRIVGTYGYMSPEYA-MSGIVSIKTDVFSFGVLVLEIVSGQKNHT  635 (752)
Q Consensus       581 ~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~t~k~DV~S~G~vl~elltG~~p~~  635 (752)
                      ........                    .......||+.|+|||++ ....++.++|||||||++|||++|..|+.
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            76533211                    112456889999999986 45679999999999999999998655543


No 212
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=5.7e-37  Score=345.87  Aligned_cols=251  Identities=25%  Similarity=0.293  Sum_probs=204.0

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC---cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      .++|.+.+.||+|+||.||+++.. +++.||||++....   ......+.+|+.++.+++||||+++++++.+.+..++|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            467888999999999999999875 68899999986542   34567899999999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEe---cCCCCceeccccccee
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILL---DDKMNPKISDFGMARI  581 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll---~~~~~~kl~DFgla~~  581 (752)
                      |||+.+++|.+++...   ..+++..+..++.||+.||.|||+++   |+||||||+|||+   +.++.+||+|||+++.
T Consensus       105 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  178 (484)
T 3nyv_A          105 GEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH  178 (484)
T ss_dssp             ECCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred             EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence            9999999999888643   45899999999999999999999998   9999999999999   5678999999999986


Q ss_pred             ecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccc
Q 043278          582 FEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLEL  661 (752)
Q Consensus       582 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  661 (752)
                      .....   ......||+.|+|||++.+ .++.++|||||||++|||++|+.||......       .....+..+.....
T Consensus       179 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~i~~~~~~~~  247 (484)
T 3nyv_A          179 FEASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY-------DILKKVEKGKYTFE  247 (484)
T ss_dssp             BCCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCCCCC
T ss_pred             ccccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHcCCCCCC
Confidence            54322   2234578999999998876 6999999999999999999999999765421       11122222221100


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          662 IDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       662 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                       .+     ........+.+++.+||+.||.+|||+.|++++
T Consensus       248 -~~-----~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          248 -LP-----QWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             -SG-----GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -Cc-----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence             00     011123457789999999999999999999875


No 213
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=1.3e-36  Score=336.96  Aligned_cols=199  Identities=23%  Similarity=0.297  Sum_probs=172.0

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhc------CCCCcceeeeeeeeCCee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKL------QHTNLVRLLGCSLHGEER  501 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~  501 (752)
                      ..+|++.++||+|+||.||+|... +++.||||++... .....++.+|+.++..+      +|+||+++++++...+..
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            457889999999999999999865 5789999999754 23345678888888887      567999999999999999


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCC--ceecccccc
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMN--PKISDFGMA  579 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~--~kl~DFgla  579 (752)
                      ++||||++ ++|.+++.... ...+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.  +||+|||++
T Consensus       175 ~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a  249 (429)
T 3kvw_A          175 CMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSS  249 (429)
T ss_dssp             EEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             EEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccc
Confidence            99999997 68888886543 335899999999999999999999998   999999999999999887  999999999


Q ss_pred             eeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 043278          580 RIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHH  638 (752)
Q Consensus       580 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~  638 (752)
                      +.....     .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       250 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~  303 (429)
T 3kvw_A          250 CYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED  303 (429)
T ss_dssp             EETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             eecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence            764321     223578999999999999999999999999999999999999997665


No 214
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=2.7e-37  Score=328.08  Aligned_cols=253  Identities=23%  Similarity=0.343  Sum_probs=196.4

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCC--cccHHHHHHHHHHHHhcC--CCCcceeeeeeeeCCeeEE
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQ--HTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~l  503 (752)
                      ..++|.+.+.||+|+||.||++...+++.||||++....  ......+.+|+.++.+++  |+||+++++++.+++..++
T Consensus        26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l  105 (313)
T 3cek_A           26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM  105 (313)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred             ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence            457899999999999999999998889999999986542  334567899999999997  5999999999999999999


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      ||| +.+++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||+++ +.+||+|||+++...
T Consensus       106 v~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~  177 (313)
T 3cek_A          106 VME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGIANQMQ  177 (313)
T ss_dssp             EEC-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred             EEe-cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeecccccccc
Confidence            999 6788999998653   35899999999999999999999998   999999999999965 889999999998765


Q ss_pred             ccccccccccccccCCccChhhhcc-----------CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHH
Q 043278          584 VNESEANTKRIVGTYGYMSPEYAMS-----------GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQL  652 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~  652 (752)
                      ............|++.|+|||.+.+           ..++.++||||||+++|||++|+.||.....     ........
T Consensus       178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~  252 (313)
T 3cek_A          178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAI  252 (313)
T ss_dssp             ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHH
T ss_pred             CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHHHHH
Confidence            4333223334578999999999875           4788999999999999999999999965431     11122222


Q ss_pred             hhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          653 LSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       653 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ........         .+......+.+++.+||+.||.+|||+.|+++.
T Consensus       253 ~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          253 IDPNHEIE---------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             HCTTSCCC---------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HhcccccC---------CcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            22111111         111112457788899999999999999999875


No 215
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=8.4e-37  Score=329.28  Aligned_cols=258  Identities=22%  Similarity=0.298  Sum_probs=203.9

Q ss_pred             cCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCccc-----------------HHHHHHHHHHHHhcCCCCcceee
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQG-----------------IVEFKNEVRLIAKLQHTNLVRLL  492 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l~  492 (752)
                      ++|.+.+.||+|+||.||+++. +++.||||++.......                 ...+.+|+.++.+++||||++++
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~  109 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE  109 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred             CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence            6888999999999999999999 89999999986542111                 17899999999999999999999


Q ss_pred             eeeeeCCeeEEEEeeCCCCCHhHH------HhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCcEeecCCCCCcEEe
Q 043278          493 GCSLHGEERLLVYEFMPNKSLDFF------LFNSGRKNVLNWEKRFIIIEGISQGLLYLHK-YSRLRVIHRDLKASNILL  565 (752)
Q Consensus       493 ~~~~~~~~~~lv~E~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~Dikp~NIll  565 (752)
                      +++.+.+..++||||+++++|.++      +.. .....+++..+..++.||+.||.|||+ .+   |+|+||||+|||+
T Consensus       110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~  185 (348)
T 2pml_X          110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILM  185 (348)
T ss_dssp             EEEESSSEEEEEEECCTTCBSSEESSSEESSCS-SSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEE
T ss_pred             EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh-ccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEE
Confidence            999999999999999999999988      432 124569999999999999999999999 77   9999999999999


Q ss_pred             cCCCCceecccccceeecccccccccccccccCCccChhhhccC-CCCc-cchhHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 043278          566 DDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSG-IVSI-KTDVFSFGVLVLEIVSGQKNHTRHHPDRPL  643 (752)
Q Consensus       566 ~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~-k~DV~S~G~vl~elltG~~p~~~~~~~~~~  643 (752)
                      +.++.+||+|||++......    ......|+..|+|||.+.+. .++. ++||||||++++||++|+.||......   
T Consensus       186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---  258 (348)
T 2pml_X          186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---  258 (348)
T ss_dssp             CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS---
T ss_pred             cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH---
Confidence            99999999999999875433    22345789999999999887 6766 999999999999999999999765431   


Q ss_pred             chHHHHHHHhhCCCcccccC------CCCC---CCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          644 NLIGYAWQLLSDGKGLELID------PSLE---QPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       644 ~l~~~~~~~~~~~~~~~~~d------~~l~---~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                         ......+..+......+      +...   ..........+.+++.+||+.||.+|||+.|++++
T Consensus       259 ---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          259 ---VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH  323 (348)
T ss_dssp             ---HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             ---HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence               11122222221110000      0000   00001223467789999999999999999999874


No 216
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=1.9e-36  Score=328.75  Aligned_cols=263  Identities=21%  Similarity=0.309  Sum_probs=201.0

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeC-----Cee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG-----EER  501 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~  501 (752)
                      .++|.+.+.||+|+||.||++... +++.||||++.... ......+.+|++++.+++||||+++++++...     ...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            468999999999999999999865 57889999997543 23346788999999999999999999998654     368


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                      ++||||++ ++|..++..    ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus       106 ~iv~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~  177 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV  177 (364)
T ss_dssp             EEEEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEe
Confidence            99999998 588888853    34899999999999999999999998   99999999999999999999999999987


Q ss_pred             eccccccc-ccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcc
Q 043278          582 FEVNESEA-NTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGL  659 (752)
Q Consensus       582 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  659 (752)
                      ........ ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||........   .......+......
T Consensus       178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~i~~~~~~~~~~  254 (364)
T 3qyz_A          178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ---LNHILGILGSPSQE  254 (364)
T ss_dssp             CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH---HHHHHHHHCSCCHH
T ss_pred             cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH---HHHHHHHhCCCCHH
Confidence            65432221 1234678999999998764 5589999999999999999999999976653321   11111111110000


Q ss_pred             cc-----------c-CCCCCCCCCH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          660 EL-----------I-DPSLEQPCSA-----NEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       660 ~~-----------~-d~~l~~~~~~-----~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .+           . ........+.     .....+.+|+.+||+.||.+|||+.|++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00           0 0000000011     112457789999999999999999999885


No 217
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=3.9e-36  Score=340.58  Aligned_cols=252  Identities=27%  Similarity=0.331  Sum_probs=200.5

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc-------------ccHHHHHHHHHHHHhcCCCCcceeee
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG-------------QGIVEFKNEVRLIAKLQHTNLVRLLG  493 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~  493 (752)
                      ..++|.+.++||+|+||+||+|+.. +++.||||++.....             ....++.+|+.++.+++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            3578999999999999999999875 578899999875421             33567899999999999999999999


Q ss_pred             eeeeCCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCC---C
Q 043278          494 CSLHGEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKM---N  570 (752)
Q Consensus       494 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~---~  570 (752)
                      ++.++...++||||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++   .
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~  187 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLN  187 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSS
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCcc
Confidence            999999999999999999999888653   34899999999999999999999998   99999999999998776   6


Q ss_pred             ceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHH
Q 043278          571 PKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAW  650 (752)
Q Consensus       571 ~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~  650 (752)
                      +||+|||+++......   ......||+.|+|||++. ..++.++||||+|+++|+|++|+.||......       ...
T Consensus       188 ~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~  256 (504)
T 3q5i_A          188 IKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-------DII  256 (504)
T ss_dssp             EEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHH
T ss_pred             EEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHH
Confidence            9999999998765332   223457899999999876 56999999999999999999999999765421       111


Q ss_pred             HHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          651 QLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       651 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ..+..+....  +.....    .....+.+++.+|++.||.+|||+.|++++
T Consensus       257 ~~i~~~~~~~--~~~~~~----~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          257 KKVEKGKYYF--DFNDWK----NISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             HHHHHCCCCC--CHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHcCCCCC--CccccC----CCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            2222221110  000000    112457789999999999999999999875


No 218
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=7.8e-37  Score=337.88  Aligned_cols=259  Identities=24%  Similarity=0.307  Sum_probs=192.5

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeC------CeeE
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG------EERL  502 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~  502 (752)
                      .+|...+.||+|+||.||+|+.. +++.||||++.....    .+.+|++++++++|+||+++++++...      ...+
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            35778899999999999999985 589999999865432    234799999999999999999988542      2367


Q ss_pred             EEEeeCCCCCHhHHHhh-cCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCC-CCceecccccce
Q 043278          503 LVYEFMPNKSLDFFLFN-SGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDK-MNPKISDFGMAR  580 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~-~~~kl~DFgla~  580 (752)
                      +||||+++ +|...+.. ......+++..+..++.||++||+|||+.+   |+||||||+||||+.+ +.+||+|||+++
T Consensus       130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            99999986 45444432 223456999999999999999999999988   9999999999999965 568999999998


Q ss_pred             eecccccccccccccccCCccChhhhccC-CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhh-----
Q 043278          581 IFEVNESEANTKRIVGTYGYMSPEYAMSG-IVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLS-----  654 (752)
Q Consensus       581 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~-----  654 (752)
                      .+.....   .....+|+.|+|||++.+. .++.++|||||||+||||++|+.||.......   .+....+.+.     
T Consensus       206 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~---~l~~i~~~lg~p~~~  279 (420)
T 1j1b_A          206 QLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD---QLVEIIKVLGTPTRE  279 (420)
T ss_dssp             ECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCSCCHH
T ss_pred             hcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHH
Confidence            7543321   2235789999999999765 79999999999999999999999997654221   1111111111     


Q ss_pred             -----CCCcccccCCCCCCC-----CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          655 -----DGKGLELIDPSLEQP-----CSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       655 -----~~~~~~~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                           .....+..-+.+...     ........+.+|+.+||+.||.+|||+.|++++
T Consensus       280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence                 011111111111110     011123567889999999999999999999875


No 219
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=1.1e-36  Score=320.74  Aligned_cols=251  Identities=24%  Similarity=0.313  Sum_probs=201.9

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc---------ccHHHHHHHHHHHHhcC-CCCcceeeeeeee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG---------QGIVEFKNEVRLIAKLQ-HTNLVRLLGCSLH  497 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~  497 (752)
                      .++|.+.+.||+|+||.||++... +++.||||++.....         .....+.+|+.++.+++ ||||+++++++.+
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            468889999999999999999875 578999999865431         22456789999999995 9999999999999


Q ss_pred             CCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccc
Q 043278          498 GEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFG  577 (752)
Q Consensus       498 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFg  577 (752)
                      ++..++||||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+|+||||+||+++.++.+||+|||
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg  169 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFG  169 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCT
T ss_pred             CCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEeccc
Confidence            99999999999999999998653   35899999999999999999999998   9999999999999999999999999


Q ss_pred             cceeecccccccccccccccCCccChhhhc------cCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHH
Q 043278          578 MARIFEVNESEANTKRIVGTYGYMSPEYAM------SGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQ  651 (752)
Q Consensus       578 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~  651 (752)
                      ++.......   ......+++.|+|||.+.      ...++.++||||||++++||++|+.||.....      ... ..
T Consensus       170 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~-~~  239 (298)
T 1phk_A          170 FSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------MLM-LR  239 (298)
T ss_dssp             TCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHH-HH
T ss_pred             chhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH------HHH-HH
Confidence            998754322   123356899999999885      45789999999999999999999999865431      111 11


Q ss_pred             HhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 043278          652 LLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVC  701 (752)
Q Consensus       652 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~  701 (752)
                      .+..+... ...+     ........+.+++.+|++.||.+|||+.|+++
T Consensus       240 ~~~~~~~~-~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          240 MIMSGNYQ-FGSP-----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HHHHTCCC-CCTT-----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHhcCCcc-cCcc-----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            22221111 0011     11122345778999999999999999999986


No 220
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.6e-37  Score=337.91  Aligned_cols=263  Identities=18%  Similarity=0.254  Sum_probs=195.4

Q ss_pred             HHHhcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeee-------
Q 043278          426 AAAANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLH-------  497 (752)
Q Consensus       426 ~~~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------  497 (752)
                      ....++|.+.+.||+|+||.||+|+. .+++.||||++......    ..+|+.+++.++||||+++++++..       
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            34567899999999999999999986 56899999998654322    2479999999999999999999844       


Q ss_pred             -------------------------------CCeeEEEEeeCCCCCHhHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHH
Q 043278          498 -------------------------------GEERLLVYEFMPNKSLDFFLFNS-GRKNVLNWEKRFIIIEGISQGLLYL  545 (752)
Q Consensus       498 -------------------------------~~~~~lv~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~L  545 (752)
                                                     ....++||||++ ++|...+... .....+++..+..++.||++||+||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                           234789999998 5777766531 2345699999999999999999999


Q ss_pred             HhcCCCcEeecCCCCCcEEec-CCCCceecccccceeecccccccccccccccCCccChhhhccC-CCCccchhHHHHHH
Q 043278          546 HKYSRLRVIHRDLKASNILLD-DKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSG-IVSIKTDVFSFGVL  623 (752)
Q Consensus       546 H~~~~~~iiH~Dikp~NIll~-~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~k~DV~S~G~v  623 (752)
                      |+.+   |+||||||+|||++ .++.+||+|||+++......   ......+|+.|+|||.+.+. .++.++||||+||+
T Consensus       158 H~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  231 (383)
T 3eb0_A          158 HSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV  231 (383)
T ss_dssp             HTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             HHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence            9988   99999999999998 68899999999998754332   12235679999999998875 59999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCC----------CcccccCCCCCCC-----CCHHHHHHHHHHHHHcccC
Q 043278          624 VLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDG----------KGLELIDPSLEQP-----CSANEVMRCIHVGLLCVQD  688 (752)
Q Consensus       624 l~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~----------~~~~~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~  688 (752)
                      +|||++|+.||......+.   .....+.+...          ...+..-+.+...     .+......+.+|+.+||+.
T Consensus       232 l~ell~g~~pf~~~~~~~~---~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  308 (383)
T 3eb0_A          232 FGELILGKPLFSGETSIDQ---LVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY  308 (383)
T ss_dssp             HHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred             HHHHHhCCCCCCCCChHHH---HHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccC
Confidence            9999999999976542211   11111111100          0001111111100     1111234577899999999


Q ss_pred             CCCCCCCHHHHHHH
Q 043278          689 QAMDRPTMPEVVCM  702 (752)
Q Consensus       689 dp~~RPt~~ev~~~  702 (752)
                      ||.+|||+.|++++
T Consensus       309 dP~~R~t~~e~l~h  322 (383)
T 3eb0_A          309 EPDLRINPYEAMAH  322 (383)
T ss_dssp             SGGGSCCHHHHHTS
T ss_pred             ChhhCCCHHHHhcC
Confidence            99999999999865


No 221
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.5e-36  Score=322.97  Aligned_cols=267  Identities=23%  Similarity=0.315  Sum_probs=195.3

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecC-CceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeee-----------
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLAD-EQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSL-----------  496 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-----------  496 (752)
                      .++|.+.+.||+|+||.||+|.... ++.||||++........+++.+|+.++++++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            3678889999999999999999764 8899999998776666778999999999999999999998873           


Q ss_pred             ---eCCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEec-CCCCce
Q 043278          497 ---HGEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLD-DKMNPK  572 (752)
Q Consensus       497 ---~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~-~~~~~k  572 (752)
                         +....++||||++ |+|.+++.    ...+++..+..++.||+.||+|||+.+   |+||||||+|||++ +++.+|
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~k  161 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLE----QGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLK  161 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEE
T ss_pred             cccccCceeEEeeccC-CCHHHHhh----cCCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEE
Confidence               4467899999998 69998884    345899999999999999999999998   99999999999997 567999


Q ss_pred             ecccccceeeccccc-ccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHH
Q 043278          573 ISDFGMARIFEVNES-EANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAW  650 (752)
Q Consensus       573 l~DFgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~  650 (752)
                      |+|||+++....... ........++..|+|||.+.. ..++.++||||||+++|||++|+.||.......   ......
T Consensus       162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~  238 (320)
T 2i6l_A          162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE---QMQLIL  238 (320)
T ss_dssp             ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHH
T ss_pred             EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH---HHHHHH
Confidence            999999987543221 112233567899999998875 789999999999999999999999997654211   111100


Q ss_pred             HHhhC----------CCcccccCCCCC-CCCCH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH--hhcC
Q 043278          651 QLLSD----------GKGLELIDPSLE-QPCSA-----NEVMRCIHVGLLCVQDQAMDRPTMPEVVCM--LQNE  706 (752)
Q Consensus       651 ~~~~~----------~~~~~~~d~~l~-~~~~~-----~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~  706 (752)
                      .....          ......+..... ...+.     .....+.+++.+|++.||.+|||+.|++++  ++..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (320)
T 2i6l_A          239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIY  312 (320)
T ss_dssp             HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccc
Confidence            00000          000000000000 00000     123457789999999999999999999875  4443


No 222
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=1.1e-36  Score=324.85  Aligned_cols=253  Identities=22%  Similarity=0.302  Sum_probs=196.2

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc--------ccHHHHHHHHHHHHhcCCCCcceeeeeeeeC
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG--------QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG  498 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  498 (752)
                      ..++|.+.+.||+|+||.||+|... +++.||||++.....        .....+.+|+.++.+++||||+++++++..+
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   87 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE   87 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence            3468999999999999999999875 578999999865321        2234578999999999999999999998765


Q ss_pred             CeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCC---ceecc
Q 043278          499 EERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMN---PKISD  575 (752)
Q Consensus       499 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~---~kl~D  575 (752)
                      + .++||||+++++|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.   +||+|
T Consensus        88 ~-~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~D  160 (322)
T 2ycf_A           88 D-YYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITD  160 (322)
T ss_dssp             S-EEEEEECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECC
T ss_pred             c-eEEEEecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEcc
Confidence            4 8999999999999998853   345899999999999999999999998   999999999999987654   99999


Q ss_pred             cccceeecccccccccccccccCCccChhhhc---cCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHH
Q 043278          576 FGMARIFEVNESEANTKRIVGTYGYMSPEYAM---SGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQL  652 (752)
Q Consensus       576 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~  652 (752)
                      ||+++......   ......||+.|+|||++.   ...++.++||||||+++|||++|+.||........  +..    .
T Consensus       161 fg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~----~  231 (322)
T 2ycf_A          161 FGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKD----Q  231 (322)
T ss_dssp             CTTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHH----H
T ss_pred             Cccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHH----H
Confidence            99998754321   122356899999999874   56789999999999999999999999976543321  111    1


Q ss_pred             hhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          653 LSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       653 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      +..+....  .+....    .....+.+++.+|++.||.+|||+.|++++
T Consensus       232 ~~~~~~~~--~~~~~~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~h  275 (322)
T 2ycf_A          232 ITSGKYNF--IPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALRH  275 (322)
T ss_dssp             HHHTCCCC--CHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHhCcccc--Cchhhh----hcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence            11111110  000000    112457789999999999999999999864


No 223
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=1e-36  Score=330.68  Aligned_cols=257  Identities=23%  Similarity=0.308  Sum_probs=183.1

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeC------C
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG------E  499 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~  499 (752)
                      .++|.+.+.||+|+||.||+|.. .+|+.||||++....  ......+.+|+.++++++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            46899999999999999999986 468899999997542  23456788999999999999999999998654      5


Q ss_pred             eeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccc
Q 043278          500 ERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMA  579 (752)
Q Consensus       500 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla  579 (752)
                      ..++|+|++ +++|..++..    ..+++..+..++.||++||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a  179 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA  179 (367)
T ss_dssp             CCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC----
T ss_pred             eEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeecccc
Confidence            679999999 6888888743    45999999999999999999999998   999999999999999999999999999


Q ss_pred             eeecccccccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCc
Q 043278          580 RIFEVNESEANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKG  658 (752)
Q Consensus       580 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  658 (752)
                      +.....     .....||+.|+|||++.+ ..++.++|||||||+++||++|+.||.......   ......+.+.... 
T Consensus       180 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~l~~i~~~~g~p~-  250 (367)
T 2fst_X          180 RHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID---QLKLILRLVGTPG-  250 (367)
T ss_dssp             ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCC-
T ss_pred             cccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCC-
Confidence            864321     234578999999999887 689999999999999999999999997654221   1111111111100 


Q ss_pred             ccccCC-----------CC--CCCCCHH-----HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          659 LELIDP-----------SL--EQPCSAN-----EVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       659 ~~~~d~-----------~l--~~~~~~~-----~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .+.+..           .+  .......     ....+.+|+.+||+.||.+|||+.|++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence            000000           00  0001111     12457789999999999999999999886


No 224
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=2e-36  Score=329.40  Aligned_cols=261  Identities=24%  Similarity=0.258  Sum_probs=190.8

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCC------e
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGE------E  500 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~  500 (752)
                      ++|.+.+.||+|+||.||+|... +++.||||++....  ......+.+|+.+++.++||||+++++++...+      .
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~  104 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  104 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence            67889999999999999999864 58899999997542  234456889999999999999999999987654      7


Q ss_pred             eEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccce
Q 043278          501 RLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMAR  580 (752)
Q Consensus       501 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~  580 (752)
                      .++||||+++ +|.+.+.     ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus       105 ~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~  175 (371)
T 2xrw_A          105 VYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR  175 (371)
T ss_dssp             EEEEEECCSE-EHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred             eEEEEEcCCC-CHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccc
Confidence            8999999985 6777763     23899999999999999999999998   9999999999999999999999999998


Q ss_pred             eecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchH--------------
Q 043278          581 IFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLI--------------  646 (752)
Q Consensus       581 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~--------------  646 (752)
                      ......   ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+              
T Consensus       176 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  252 (371)
T 2xrw_A          176 TAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK  252 (371)
T ss_dssp             -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred             cccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence            654221   223457899999999999999999999999999999999999999765421100000              


Q ss_pred             --HHHHHHhhCC-Ccc----cccCCCCCCCC----CHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          647 --GYAWQLLSDG-KGL----ELIDPSLEQPC----SANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       647 --~~~~~~~~~~-~~~----~~~d~~l~~~~----~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                        .......... ...    +.+-+....+.    .......+.+|+.+||+.||.+|||++|++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence              0000000000 000    00000000000    11224578899999999999999999999886


No 225
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=1.3e-36  Score=329.36  Aligned_cols=269  Identities=20%  Similarity=0.236  Sum_probs=190.9

Q ss_pred             HHHHHhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCe--
Q 043278          424 TIAAAANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEE--  500 (752)
Q Consensus       424 ~i~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--  500 (752)
                      +.....++|.+.+.||+|+||.||+|+.. +++.||||++..... ....+.+|++.+..++||||+++++++.....  
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            44566789999999999999999999974 588999999865432 23456788888999999999999999865433  


Q ss_pred             -----eEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCcEeecCCCCCcEEecC-CCCce
Q 043278          501 -----RLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLH--KYSRLRVIHRDLKASNILLDD-KMNPK  572 (752)
Q Consensus       501 -----~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~~~~iiH~Dikp~NIll~~-~~~~k  572 (752)
                           .++||||++++.+..+.........+++..+..++.||+.||.|||  +.+   |+||||||+|||++. ++.+|
T Consensus        96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~k  172 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLK  172 (360)
T ss_dssp             TTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEE
T ss_pred             ccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEE
Confidence                 7899999987544333332344566899999999999999999999  777   999999999999996 89999


Q ss_pred             ecccccceeecccccccccccccccCCccChhhhccC-CCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHH
Q 043278          573 ISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSG-IVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQ  651 (752)
Q Consensus       573 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~  651 (752)
                      |+|||+++.......   .....||+.|+|||++.+. .++.++||||||+++|||++|+.||........   .....+
T Consensus       173 l~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~---~~~~~~  246 (360)
T 3e3p_A          173 LCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ---LHEIVR  246 (360)
T ss_dssp             ECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHH
T ss_pred             EeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH---HHHHHH
Confidence            999999986553321   2235689999999998765 489999999999999999999999976542211   111111


Q ss_pred             HhhC-----------C-CcccccCCC------CCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          652 LLSD-----------G-KGLELIDPS------LEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       652 ~~~~-----------~-~~~~~~d~~------l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ....           . ......+..      ............+.+|+.+||+.||.+|||+.|++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          247 VLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            1100           0 000000000      0011112234578899999999999999999999875


No 226
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=1.2e-36  Score=326.98  Aligned_cols=254  Identities=23%  Similarity=0.317  Sum_probs=197.5

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCC-cccHHHHHHHHHH-HHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSS-GQGIVEFKNEVRL-IAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      ..++|++.+.||+|+||.||+|+. .+++.||||++.... .....++..|..+ +..++||||+++++++.+.+..++|
T Consensus        49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv  128 (340)
T 3an0_A           49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC  128 (340)
T ss_dssp             CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred             ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence            346788889999999999999986 568899999997653 2334455555555 7778999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCcEeecCCCCCcEEecCCCCceecccccceee
Q 043278          505 YEFMPNKSLDFFLFNS-GRKNVLNWEKRFIIIEGISQGLLYLHKY-SRLRVIHRDLKASNILLDDKMNPKISDFGMARIF  582 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~  582 (752)
                      |||+++ +|.+++... .....+++..+..++.||+.||+|||+. +   |+||||||+|||++.++.+||+|||+++..
T Consensus       129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  204 (340)
T 3an0_A          129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL  204 (340)
T ss_dssp             ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred             HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence            999985 888887542 2345699999999999999999999987 7   999999999999999999999999999865


Q ss_pred             cccccccccccccccCCccChhhhc----cCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCc
Q 043278          583 EVNESEANTKRIVGTYGYMSPEYAM----SGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKG  658 (752)
Q Consensus       583 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  658 (752)
                      ....   ......||+.|+|||++.    ...++.++||||||+++|||++|+.||......     ............ 
T Consensus       205 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~~-  275 (340)
T 3an0_A          205 VDSV---AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-----FQQLKQVVEEPS-  275 (340)
T ss_dssp             SCHH---HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-----HHHHHHHHHSCC-
T ss_pred             cccc---ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-----HHHHHHHhcCCC-
Confidence            4221   112346899999999974    347899999999999999999999999753311     111122222211 


Q ss_pred             ccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          659 LELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       659 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ....        .......+.+++.+||+.||++|||+.|+++.
T Consensus       276 ~~~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  311 (340)
T 3an0_A          276 PQLP--------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH  311 (340)
T ss_dssp             CCCC--------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             CCCC--------cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            1110        01123457789999999999999999999873


No 227
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=3.1e-36  Score=331.90  Aligned_cols=267  Identities=22%  Similarity=0.346  Sum_probs=182.9

Q ss_pred             cCCCc-CCeeecCCcccEEEEEec---CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeee--CCeeEE
Q 043278          430 NNFST-TNKLGEGGFGPVYKGKLA---DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLH--GEERLL  503 (752)
Q Consensus       430 ~~~~~-~~~LG~G~fg~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l  503 (752)
                      +.|.+ .++||+|+||.||+|+..   +++.||||++.....  ...+.+|+.++.+++||||+++++++..  +...++
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l   97 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL   97 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence            34554 468999999999999965   478899999975432  3467899999999999999999999954  678899


Q ss_pred             EEeeCCCCCHhHHHhhc------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEe----cCCCCcee
Q 043278          504 VYEFMPNKSLDFFLFNS------GRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILL----DDKMNPKI  573 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll----~~~~~~kl  573 (752)
                      ||||+++ +|..++...      .....+++..+..++.||+.||+|||+.+   |+||||||+||||    +.++.+||
T Consensus        98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl  173 (405)
T 3rgf_A           98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKI  173 (405)
T ss_dssp             EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred             EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEE
Confidence            9999975 666666421      12234899999999999999999999998   9999999999999    77899999


Q ss_pred             cccccceeeccccc-ccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC----C--cch
Q 043278          574 SDFGMARIFEVNES-EANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDR----P--LNL  645 (752)
Q Consensus       574 ~DFgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~----~--~~l  645 (752)
                      +|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......    .  ...
T Consensus       174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  253 (405)
T 3rgf_A          174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ  253 (405)
T ss_dssp             CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred             EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence            99999987653321 122334678999999999987 459999999999999999999999997654321    0  111


Q ss_pred             HHHHHHHhhCCCc---ccc------------cCCCCCCCCCHH---------HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 043278          646 IGYAWQLLSDGKG---LEL------------IDPSLEQPCSAN---------EVMRCIHVGLLCVQDQAMDRPTMPEVVC  701 (752)
Q Consensus       646 ~~~~~~~~~~~~~---~~~------------~d~~l~~~~~~~---------~~~~l~~l~~~Cl~~dp~~RPt~~ev~~  701 (752)
                      +......+.....   ..+            +...........         ....+.+|+.+||+.||.+|||++|+++
T Consensus       254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~  333 (405)
T 3rgf_A          254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  333 (405)
T ss_dssp             HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            1111111111000   000            000000000000         0235678999999999999999999998


Q ss_pred             H
Q 043278          702 M  702 (752)
Q Consensus       702 ~  702 (752)
                      +
T Consensus       334 h  334 (405)
T 3rgf_A          334 D  334 (405)
T ss_dssp             S
T ss_pred             C
Confidence            6


No 228
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=2.1e-36  Score=351.68  Aligned_cols=256  Identities=23%  Similarity=0.314  Sum_probs=202.3

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEecC----CceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeE
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKLAD----EQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERL  502 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~~~----~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  502 (752)
                      ..++|.+.+.||+|+||.||+|....    +..||||++.... ......+.+|+.++.+++||||+++++++. ++..+
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~  466 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW  466 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence            34678888999999999999998743    4569999987643 334467899999999999999999999985 45689


Q ss_pred             EEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceee
Q 043278          503 LVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIF  582 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~  582 (752)
                      +||||+++|+|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus       467 lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~  541 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM  541 (656)
T ss_dssp             EEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred             EEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeec
Confidence            999999999999999653  335899999999999999999999998   999999999999999999999999999876


Q ss_pred             cccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCCcccc
Q 043278          583 EVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGKGLEL  661 (752)
Q Consensus       583 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  661 (752)
                      ...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......       .....+..+....+
T Consensus       542 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-------~~~~~i~~~~~~~~  613 (656)
T 2j0j_A          542 EDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-------DVIGRIENGERLPM  613 (656)
T ss_dssp             CC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHHTCCCCC
T ss_pred             CCCcce-eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-------HHHHHHHcCCCCCC
Confidence            433221 1223456789999999999999999999999999999997 99998765421       11122222221111


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          662 IDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       662 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                               +......+.+++.+||+.||.+|||+.|+++.|+.+
T Consensus       614 ---------~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i  649 (656)
T 2j0j_A          614 ---------PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  649 (656)
T ss_dssp             ---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---------CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence                     111234577899999999999999999999999764


No 229
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=1.4e-36  Score=325.78  Aligned_cols=260  Identities=22%  Similarity=0.275  Sum_probs=202.1

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe--cCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCC------CcceeeeeeeeCCe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL--ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHT------NLVRLLGCSLHGEE  500 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~--~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~~  500 (752)
                      .++|.+.+.||+|+||.||++..  .+++.||||+++.. ......+.+|+.++.+++|+      +++++++++.+.+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            35788999999999999999986  36789999999654 33456788999999998765      49999999999999


Q ss_pred             eEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC-------------
Q 043278          501 RLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD-------------  567 (752)
Q Consensus       501 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~-------------  567 (752)
                      .++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+++   |+||||||+|||++.             
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~  166 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKR  166 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----C
T ss_pred             EEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccc
Confidence            99999999 889988886543 245899999999999999999999998   999999999999987             


Q ss_pred             ------CCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 043278          568 ------KMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDR  641 (752)
Q Consensus       568 ------~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~  641 (752)
                            ++.+||+|||+++.....     .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus       167 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  241 (339)
T 1z57_A          167 DERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE  241 (339)
T ss_dssp             EEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred             ccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence                  678999999999864322     234578999999999999999999999999999999999999997654221


Q ss_pred             CcchHHHHHHHhhC--------CCccccc-CCCC---------------------CCCCCHHHHHHHHHHHHHcccCCCC
Q 043278          642 PLNLIGYAWQLLSD--------GKGLELI-DPSL---------------------EQPCSANEVMRCIHVGLLCVQDQAM  691 (752)
Q Consensus       642 ~~~l~~~~~~~~~~--------~~~~~~~-d~~l---------------------~~~~~~~~~~~l~~l~~~Cl~~dp~  691 (752)
                      ..   .........        ....... ....                     ...........+.+++.+||+.||.
T Consensus       242 ~~---~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~  318 (339)
T 1z57_A          242 HL---AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA  318 (339)
T ss_dssp             HH---HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred             HH---HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcc
Confidence            11   111111100        0000000 0000                     0112334556788999999999999


Q ss_pred             CCCCHHHHHHH
Q 043278          692 DRPTMPEVVCM  702 (752)
Q Consensus       692 ~RPt~~ev~~~  702 (752)
                      +|||+.|++++
T Consensus       319 ~Rpt~~ell~h  329 (339)
T 1z57_A          319 KRITLREALKH  329 (339)
T ss_dssp             TSCCHHHHTTS
T ss_pred             cccCHHHHhcC
Confidence            99999999864


No 230
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=1.1e-36  Score=325.18  Aligned_cols=264  Identities=22%  Similarity=0.319  Sum_probs=199.2

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEe--cCCceeEEEEcccCCc--ccHHHHHHHHHHHHhc---CCCCcceeeeeee----
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKL--ADEQEVAIKRLSRSSG--QGIVEFKNEVRLIAKL---QHTNLVRLLGCSL----  496 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~--~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~----  496 (752)
                      ..++|.+.+.||+|+||.||+++.  .+++.||+|++.....  .....+.+|+.+++.+   +||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            457899999999999999999997  4678899999864321  1223456777777666   8999999999987    


Q ss_pred             -eCCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecc
Q 043278          497 -HGEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISD  575 (752)
Q Consensus       497 -~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~D  575 (752)
                       .....++||||++ |+|.+++.... ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~D  163 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLAD  163 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECS
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEec
Confidence             5567899999998 69999886543 335899999999999999999999998   99999999999999999999999


Q ss_pred             cccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhC
Q 043278          576 FGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSD  655 (752)
Q Consensus       576 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  655 (752)
                      ||+++......   ......|+..|+|||.+.+..++.++||||||+++|||++|+.||......   ............
T Consensus       164 fg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~~  237 (326)
T 1blx_A          164 FGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV---DQLGKILDVIGL  237 (326)
T ss_dssp             CCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCC
T ss_pred             CcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHHHHcCC
Confidence            99998654322   223457899999999999999999999999999999999999999765421   111111111111


Q ss_pred             CCcccc----------cCC---CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          656 GKGLEL----------IDP---SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       656 ~~~~~~----------~d~---~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ......          ...   .............+.+++.+||+.||.+|||+.|++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  297 (326)
T ss_dssp             CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            000000          000   00000111123456789999999999999999999864


No 231
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=7.5e-37  Score=330.37  Aligned_cols=263  Identities=21%  Similarity=0.302  Sum_probs=197.9

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeC-----Cee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG-----EER  501 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~  501 (752)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++.... .....++.+|+.++.+++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            467888999999999999999875 58899999996543 23345678999999999999999999987654     678


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                      ++||||++ ++|..++..    ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus        90 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI  161 (353)
T ss_dssp             EEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEecccccc
Confidence            99999997 689888854    35899999999999999999999998   99999999999999999999999999987


Q ss_pred             eccccccc--------ccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHH
Q 043278          582 FEVNESEA--------NTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQL  652 (752)
Q Consensus       582 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~  652 (752)
                      ........        ......||+.|+|||++.. ..++.++||||||+++|||++|+.||........   .......
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~  238 (353)
T 2b9h_A          162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ---LLLIFGI  238 (353)
T ss_dssp             CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHH
T ss_pred             cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHHH
Confidence            65322111        1123578999999998765 7899999999999999999999999976542110   1111111


Q ss_pred             hhCCCccc---c---------cCC-CCCCCCC-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          653 LSDGKGLE---L---------IDP-SLEQPCS-----ANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       653 ~~~~~~~~---~---------~d~-~l~~~~~-----~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ........   .         +.. .......     ......+.+++.+||+.||.+|||+.|++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            11000000   0         000 0000000     0122456789999999999999999999885


No 232
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=1e-35  Score=325.08  Aligned_cols=201  Identities=25%  Similarity=0.349  Sum_probs=170.0

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcC-CC-----CcceeeeeeeeCCee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQ-HT-----NLVRLLGCSLHGEER  501 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~~  501 (752)
                      .++|.+.+.||+|+||+||+|... +++.||||++... .....++..|+.++..++ |+     +|+++++++...+..
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  131 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL  131 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence            468999999999999999999865 5788999999753 234556788999988885 44     499999999999999


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEec--CCCCceecccccc
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLD--DKMNPKISDFGMA  579 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~--~~~~~kl~DFgla  579 (752)
                      ++||||++ ++|.+++.... ...+++..+..++.||+.||.|||.+. .+|+||||||+||||+  .++.+||+|||++
T Consensus       132 ~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a  208 (382)
T 2vx3_A          132 CLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSAIKIVDFGSS  208 (382)
T ss_dssp             EEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             EEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence            99999996 59988886543 245899999999999999999999521 2399999999999994  5788999999999


Q ss_pred             eeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 043278          580 RIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHH  638 (752)
Q Consensus       580 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~  638 (752)
                      +.....     .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       209 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  262 (382)
T 2vx3_A          209 CQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN  262 (382)
T ss_dssp             EETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             eecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            875422     224578999999999999999999999999999999999999998654


No 233
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=2.2e-35  Score=321.27  Aligned_cols=262  Identities=21%  Similarity=0.267  Sum_probs=198.9

Q ss_pred             cCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHHHhcC-----------CCCcceeeeeeee
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQ-----------HTNLVRLLGCSLH  497 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~  497 (752)
                      ++|.+.+.||+|+||.||+|+. .+++.||||++... ......+.+|+.++.+++           |+||+++++++..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            5788899999999999999986 46889999999743 234566889999999886           8899999999876


Q ss_pred             CC----eeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCcEeecCCCCCcEEec------
Q 043278          498 GE----ERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKY-SRLRVIHRDLKASNILLD------  566 (752)
Q Consensus       498 ~~----~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiH~Dikp~NIll~------  566 (752)
                      .+    ..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||++ +   |+||||||+|||++      
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~  172 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPE  172 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTT
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCc
Confidence            54    789999999 899999886543 34589999999999999999999998 7   99999999999994      


Q ss_pred             CCCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchH
Q 043278          567 DKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLI  646 (752)
Q Consensus       567 ~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~  646 (752)
                      ..+.+||+|||+++.....     .....||+.|+|||++.+..++.++||||||+++|||++|+.||............
T Consensus       173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  247 (373)
T 1q8y_A          173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD  247 (373)
T ss_dssp             TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred             CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence            4457999999999865422     22357899999999999999999999999999999999999999866533221111


Q ss_pred             HHH---HHHhhC--------C----------CcccccCC-C---------CCCCCCHHHHHHHHHHHHHcccCCCCCCCC
Q 043278          647 GYA---WQLLSD--------G----------KGLELIDP-S---------LEQPCSANEVMRCIHVGLLCVQDQAMDRPT  695 (752)
Q Consensus       647 ~~~---~~~~~~--------~----------~~~~~~d~-~---------l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt  695 (752)
                      ...   ...+..        +          .....+.. .         -....+......+.+|+.+||+.||.+|||
T Consensus       248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  327 (373)
T 1q8y_A          248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD  327 (373)
T ss_dssp             HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred             HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence            111   111100        0          00000000 0         011234566778889999999999999999


Q ss_pred             HHHHHHH
Q 043278          696 MPEVVCM  702 (752)
Q Consensus       696 ~~ev~~~  702 (752)
                      +.|++++
T Consensus       328 ~~ell~h  334 (373)
T 1q8y_A          328 AGGLVNH  334 (373)
T ss_dssp             HHHHHTC
T ss_pred             HHHHhhC
Confidence            9999885


No 234
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=2.7e-36  Score=322.48  Aligned_cols=255  Identities=23%  Similarity=0.326  Sum_probs=177.5

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCc-ccHHHHHHHHH-HHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG-QGIVEFKNEVR-LIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      ++|...+.||+|+||.||++... +++.||||++..... ....++..|+. +++.++||||+++++++.+.+..++|||
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e  101 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME  101 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence            67888899999999999999975 688999999976532 23345556665 6777899999999999999999999999


Q ss_pred             eCCCCCHhHHHhh--cCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCcEeecCCCCCcEEecCCCCceecccccceeec
Q 043278          507 FMPNKSLDFFLFN--SGRKNVLNWEKRFIIIEGISQGLLYLHKY-SRLRVIHRDLKASNILLDDKMNPKISDFGMARIFE  583 (752)
Q Consensus       507 ~~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~  583 (752)
                      |+++ +|.+++..  ......+++..+..++.|++.||.|||+. +   |+||||||+|||++.++.+||+|||+++...
T Consensus       102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~  177 (327)
T 3aln_A          102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLV  177 (327)
T ss_dssp             CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred             ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence            9985 77776643  12245689999999999999999999998 7   9999999999999999999999999998654


Q ss_pred             ccccccccccccccCCccChhhh----ccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcc
Q 043278          584 VNESEANTKRIVGTYGYMSPEYA----MSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGL  659 (752)
Q Consensus       584 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  659 (752)
                      ...   ......|++.|+|||.+    .+..++.++||||||+++|||++|+.||.........      ......+.. 
T Consensus       178 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------~~~~~~~~~-  247 (327)
T 3aln_A          178 DSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ------LTQVVKGDP-  247 (327)
T ss_dssp             -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------CCCCCSCC-
T ss_pred             ccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH------HHHHhcCCC-
Confidence            322   12234689999999998    4567899999999999999999999999754321100      000011111 


Q ss_pred             cccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          660 ELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       660 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                          +.+...........+.+++.+||+.||.+|||+.|+++.
T Consensus       248 ----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          248 ----PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH  286 (327)
T ss_dssp             ----CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             ----CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence                111111111223457789999999999999999999764


No 235
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=5.3e-36  Score=325.99  Aligned_cols=256  Identities=23%  Similarity=0.300  Sum_probs=194.6

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCee----
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEER----  501 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----  501 (752)
                      .++|...+.||+|+||.||+|... +++.||||++....  .....++.+|+.++++++||||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            368888999999999999999864 58899999997643  23356788999999999999999999999877654    


Q ss_pred             --EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccc
Q 043278          502 --LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMA  579 (752)
Q Consensus       502 --~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla  579 (752)
                        ++||||++ ++|..++.     ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       121 ~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a  191 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLA  191 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred             eEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCcc
Confidence              99999998 67877762     23899999999999999999999998   999999999999999999999999999


Q ss_pred             eeecccccccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCc
Q 043278          580 RIFEVNESEANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKG  658 (752)
Q Consensus       580 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~  658 (752)
                      +.....     .....||+.|+|||.+.+ ..++.++||||||++++||++|+.||.......   ............ .
T Consensus       192 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~-~  262 (371)
T 4exu_A          192 RHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD---QLTQILKVTGVP-G  262 (371)
T ss_dssp             -------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCC-C
T ss_pred             cccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCC-c
Confidence            864322     223578999999999987 789999999999999999999999997654211   111111110000 0


Q ss_pred             cccc---------------CCCCCCC---CCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          659 LELI---------------DPSLEQP---CSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       659 ~~~~---------------d~~l~~~---~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .+..               .......   ........+.+|+.+||+.||.+|||+.|++++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence            0000               0000000   000113467789999999999999999999876


No 236
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=6.4e-36  Score=315.35  Aligned_cols=253  Identities=24%  Similarity=0.357  Sum_probs=192.1

Q ss_pred             hcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeee----------
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLH----------  497 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----------  497 (752)
                      .++|++.+.||+|+||.||+|+.. +++.||||++... ......+.+|+.++.+++||||+++++++.+          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            467889999999999999999874 6889999999643 3345678999999999999999999998765          


Q ss_pred             ---CCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceec
Q 043278          498 ---GEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKIS  574 (752)
Q Consensus       498 ---~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~  574 (752)
                         .+..++||||+++++|.+++...  ...+++..++.++.||+.||+|||+++   |+||||||+|||++.++.+||+
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~  158 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIG  158 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEEC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEe
Confidence               35678999999999999999653  345788999999999999999999998   9999999999999999999999


Q ss_pred             ccccceeeccccc------------ccccccccccCCccChhhhccC-CCCccchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 043278          575 DFGMARIFEVNES------------EANTKRIVGTYGYMSPEYAMSG-IVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDR  641 (752)
Q Consensus       575 DFgla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~  641 (752)
                      |||+++.......            ........|++.|+|||.+.+. .++.++||||||+++|||++   |+....   
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~---  232 (303)
T 1zy4_A          159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM---  232 (303)
T ss_dssp             CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH---
T ss_pred             eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch---
Confidence            9999986542210            1122345689999999999864 78999999999999999998   332110   


Q ss_pred             CcchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          642 PLNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       642 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                        . .......+....      ..+....+......+.+++.+|++.||.+|||+.|++++
T Consensus       233 --~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          233 --E-RVNILKKLRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             --H-HHHHHHHHHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             --h-HHHHHHhccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence              1 111112222211      111111222333456789999999999999999999884


No 237
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=8.4e-36  Score=312.47  Aligned_cols=253  Identities=26%  Similarity=0.339  Sum_probs=202.3

Q ss_pred             HHhcCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEE
Q 043278          427 AAANNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLL  503 (752)
Q Consensus       427 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  503 (752)
                      ...++|.+.+.||+|+||.||+++.. +++.||||++....  ......+.+|+.++.+++||||+++++++.+.+..++
T Consensus        19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            34578999999999999999999875 68899999986542  3456788999999999999999999999999999999


Q ss_pred             EEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCC---CCceecccccce
Q 043278          504 VYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDK---MNPKISDFGMAR  580 (752)
Q Consensus       504 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~---~~~kl~DFgla~  580 (752)
                      ||||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+|+||||+||+++.+   +.+||+|||++.
T Consensus        99 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~  172 (287)
T 2wei_A           99 VGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (287)
T ss_dssp             EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred             EEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcce
Confidence            99999999998888653   34899999999999999999999998   9999999999999754   469999999998


Q ss_pred             eecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCccc
Q 043278          581 IFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLE  660 (752)
Q Consensus       581 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  660 (752)
                      ......   ......+++.|+|||.+.+ .++.++||||||++++||++|+.||......      . ....+..+....
T Consensus       173 ~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~-~~~~~~~~~~~~  241 (287)
T 2wei_A          173 CFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY------D-ILKRVETGKYAF  241 (287)
T ss_dssp             TBCCCS---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------H-HHHHHHHCCCCC
T ss_pred             eecCCC---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH------H-HHHHHHcCCCCC
Confidence            654322   1223468899999998875 4899999999999999999999998764311      1 112222222110


Q ss_pred             ccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          661 LIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       661 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .. +.     .......+.+++.+|++.||.+|||+.|+++.
T Consensus       242 ~~-~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          242 DL-PQ-----WRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             CS-GG-----GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             Cc-hh-----hhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence            00 00     01112357789999999999999999999874


No 238
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=3.9e-36  Score=333.72  Aligned_cols=253  Identities=21%  Similarity=0.269  Sum_probs=188.1

Q ss_pred             CCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCeeEEEEeeCC
Q 043278          431 NFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEERLLVYEFMP  509 (752)
Q Consensus       431 ~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~  509 (752)
                      .|...+.||+|+||+||.+...+|+.||||++...   ..+.+.+|+.++.++ +||||+++++++.+++..+|||||++
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~   92 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN   92 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence            44556889999999998777678999999998653   345678999999886 89999999999999999999999996


Q ss_pred             CCCHhHHHhhcCCCC----CCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCC-------------CCce
Q 043278          510 NKSLDFFLFNSGRKN----VLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDK-------------MNPK  572 (752)
Q Consensus       510 ~gsL~~~l~~~~~~~----~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~-------------~~~k  572 (752)
                       |+|.+++.......    ...+..++.++.||+.||+|||+.+   |+||||||+||||+.+             +.+|
T Consensus        93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k  168 (434)
T 2rio_A           93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRIL  168 (434)
T ss_dssp             -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred             -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEE
Confidence             69999986543211    1133346789999999999999998   9999999999999654             4799


Q ss_pred             ecccccceeeccccccc--ccccccccCCccChhhhcc-------CCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCC
Q 043278          573 ISDFGMARIFEVNESEA--NTKRIVGTYGYMSPEYAMS-------GIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRP  642 (752)
Q Consensus       573 l~DFgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~  642 (752)
                      |+|||+++.........  ......||+.|+|||++.+       ..++.++|||||||++|||++ |+.||....... 
T Consensus       169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-  247 (434)
T 2rio_A          169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-  247 (434)
T ss_dssp             ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-
T ss_pred             EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-
Confidence            99999999765433221  2234679999999999976       678999999999999999999 899986543210 


Q ss_pred             cchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          643 LNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       643 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                             ...+.....    .+.+...........+.+++.+|++.||.+|||+.||+++
T Consensus       248 -------~~i~~~~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  296 (434)
T 2rio_A          248 -------SNIIRGIFS----LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH  296 (434)
T ss_dssp             -------HHHHHTCCC----CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -------HHHhcCCCC----cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence                   111111100    0111122344556778899999999999999999999863


No 239
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=6.3e-36  Score=320.83  Aligned_cols=253  Identities=19%  Similarity=0.200  Sum_probs=172.6

Q ss_pred             hcCCCcCC-eeecCCcccEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeeeeee----CCeeE
Q 043278          429 ANNFSTTN-KLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLH----GEERL  502 (752)
Q Consensus       429 ~~~~~~~~-~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~  502 (752)
                      .++|.+.+ .||+|+||.||+++.. +++.||||++...    .....+....+..++|+||+++++++..    +...+
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~  102 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL  102 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence            46788754 6999999999999876 6899999998653    2222333445667799999999999876    44589


Q ss_pred             EEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC---CCCceecccccc
Q 043278          503 LVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD---KMNPKISDFGMA  579 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~---~~~~kl~DFgla  579 (752)
                      +||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+   |+||||||+|||++.   ++.+||+|||++
T Consensus       103 lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~  178 (336)
T 3fhr_A          103 IIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFA  178 (336)
T ss_dssp             EEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccc
Confidence            9999999999999996542 346999999999999999999999998   999999999999976   455999999999


Q ss_pred             eeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcc
Q 043278          580 RIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGL  659 (752)
Q Consensus       580 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  659 (752)
                      +......    .....+|+.|+|||++.+..++.++||||||+++|||++|+.||............   ......+. .
T Consensus       179 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~-~  250 (336)
T 3fhr_A          179 KETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM---KRRIRLGQ-Y  250 (336)
T ss_dssp             EEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred             eeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH---HHhhhccc-c
Confidence            8654221    22356799999999999889999999999999999999999999765433211000   00010000 0


Q ss_pred             cccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          660 ELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       660 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ...     .+........+.+++.+|++.||.+|||+.|++++
T Consensus       251 ~~~-----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          251 GFP-----NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH  288 (336)
T ss_dssp             CCC-----TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             ccC-----chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            000     01111223457789999999999999999999984


No 240
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=3.8e-36  Score=324.95  Aligned_cols=255  Identities=22%  Similarity=0.271  Sum_probs=194.1

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCC--cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCe------
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSS--GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEE------  500 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------  500 (752)
                      ++|...+.||+|+||.||+|... +|+.||||++....  .....++.+|+.++.+++||||+++++++...+.      
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            57888899999999999999874 58899999997643  2234678899999999999999999999987654      


Q ss_pred             eEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccce
Q 043278          501 RLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMAR  580 (752)
Q Consensus       501 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~  580 (752)
                      .++||||++ ++|..++.     ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus       104 ~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  174 (353)
T 3coi_A          104 FYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR  174 (353)
T ss_dssp             CEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred             EEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeeccccc
Confidence            499999998 58877662     24899999999999999999999998   9999999999999999999999999997


Q ss_pred             eecccccccccccccccCCccChhhhcc-CCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCC---
Q 043278          581 IFEVNESEANTKRIVGTYGYMSPEYAMS-GIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDG---  656 (752)
Q Consensus       581 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~---  656 (752)
                      .....     .....+|+.|+|||.+.+ ..++.++||||||++++||++|+.||.......   ............   
T Consensus       175 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~  246 (353)
T 3coi_A          175 HADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD---QLTQILKVTGVPGTE  246 (353)
T ss_dssp             C-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH---HHHHHHHHHCBCCHH
T ss_pred             CCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHH
Confidence            64322     223578999999999887 688999999999999999999999997654211   111111110000   


Q ss_pred             ---------------CcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          657 ---------------KGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       657 ---------------~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                                     .......+.+. .........+.+++.+|++.||.+|||+.|++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          247 FVQKLNDKAAKSYIQSLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             HHTTCSCHHHHHHHHTSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHhhHHHHHHHHhCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                           00000000110 1111223467789999999999999999999875


No 241
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.1e-35  Score=315.50  Aligned_cols=244  Identities=26%  Similarity=0.404  Sum_probs=190.4

Q ss_pred             HHHhcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcc------cHHHHHHHHHHHHhc----CCCCcceeeee
Q 043278          426 AAAANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQ------GIVEFKNEVRLIAKL----QHTNLVRLLGC  494 (752)
Q Consensus       426 ~~~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l----~h~niv~l~~~  494 (752)
                      ....++|.+.+.||+|+||.||+|+. .+++.||||++......      ....+.+|+.++.++    +|+||++++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~  106 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW  106 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence            34567899999999999999999986 46889999999765322      223456799999998    89999999999


Q ss_pred             eeeCCeeEEEEee-CCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEec-CCCCce
Q 043278          495 SLHGEERLLVYEF-MPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLD-DKMNPK  572 (752)
Q Consensus       495 ~~~~~~~~lv~E~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~-~~~~~k  572 (752)
                      +...+..++|+|+ +++++|.+++...   ..+++..++.++.||+.||+|||+.+   |+||||||+|||++ +++.+|
T Consensus       107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~k  180 (312)
T 2iwi_A          107 FETQEGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAK  180 (312)
T ss_dssp             C-----CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEE
T ss_pred             EecCCeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEE
Confidence            9999999999999 7999999998653   34899999999999999999999998   99999999999999 889999


Q ss_pred             ecccccceeecccccccccccccccCCccChhhhccCCCC-ccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHH
Q 043278          573 ISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVS-IKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQ  651 (752)
Q Consensus       573 l~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t-~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~  651 (752)
                      |+|||+++......    .....|+..|+|||++.+..+. .++||||||+++|||++|+.||....            .
T Consensus       181 l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~  244 (312)
T 2iwi_A          181 LIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------E  244 (312)
T ss_dssp             ECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------H
T ss_pred             EEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------------H
Confidence            99999998765322    2235689999999999877664 59999999999999999999986421            0


Q ss_pred             HhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          652 LLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       652 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .... ..      .+    +......+.+++.+|++.||++|||+.|++++
T Consensus       245 ~~~~-~~------~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          245 ILEA-EL------HF----PAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             HHHT-CC------CC----CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             Hhhh-cc------CC----cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1111 00      01    11122356789999999999999999999985


No 242
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.8e-35  Score=327.52  Aligned_cols=251  Identities=22%  Similarity=0.333  Sum_probs=187.3

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCeeEEEEee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEERLLVYEF  507 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~  507 (752)
                      ..+|...+.||+|+||+|+.....+++.||||++......   .+.+|+.++.++ +||||+++++++.+....+|||||
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            3568888999999999977665668899999999754332   346899999999 899999999999999999999999


Q ss_pred             CCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC-----CCCceecccccceee
Q 043278          508 MPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD-----KMNPKISDFGMARIF  582 (752)
Q Consensus       508 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~-----~~~~kl~DFgla~~~  582 (752)
                      ++ |+|.+++....  ..+....++.++.||+.||+|||+.+   |+||||||+||||+.     ...+||+|||+++..
T Consensus       100 ~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A          100 CA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL  173 (432)
T ss_dssp             CS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred             CC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence            97 69999886543  22444566789999999999999998   999999999999943     345789999999876


Q ss_pred             ccccc-ccccccccccCCccChhhhc---cCCCCccchhHHHHHHHHHHHh-CCCCCCCCCCCCCcchHHHHHHHhhCCC
Q 043278          583 EVNES-EANTKRIVGTYGYMSPEYAM---SGIVSIKTDVFSFGVLVLEIVS-GQKNHTRHHPDRPLNLIGYAWQLLSDGK  657 (752)
Q Consensus       583 ~~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~t~k~DV~S~G~vl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~  657 (752)
                      ..... ........||+.|+|||++.   ...++.++|||||||++|||++ |+.||......       .. .......
T Consensus       174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-------~~-~~~~~~~  245 (432)
T 3p23_A          174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-------QA-NILLGAC  245 (432)
T ss_dssp             ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-------HH-HHHTTCC
T ss_pred             cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-------HH-HHHhccC
Confidence            53321 12233467999999999997   4677889999999999999999 88888543311       11 1111111


Q ss_pred             cccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          658 GLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       658 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      ......      ........+.+|+.+||+.||.+|||+.||+++
T Consensus       246 ~~~~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h  284 (432)
T 3p23_A          246 SLDCLH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH  284 (432)
T ss_dssp             CCTTSC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CccccC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence            111111      122334456789999999999999999999853


No 243
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=3.6e-35  Score=317.06  Aligned_cols=259  Identities=20%  Similarity=0.240  Sum_probs=198.1

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CC-ceeEEEEcccCCcccHHHHHHHHHHHHhcCCCC------cceeeeeeeeCCee
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DE-QEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTN------LVRLLGCSLHGEER  501 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~-~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~~  501 (752)
                      ++|.+.+.||+|+||.||++... .+ +.||||+++.. ......+.+|+.++.+++|++      ++.+++++...+..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence            68889999999999999999874 34 68999999653 334567889999999997665      89999999999999


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEe----------------
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILL----------------  565 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll----------------  565 (752)
                      ++||||+ +++|.+++... ....+++..+..++.||+.||+|||+.+   |+||||||+|||+                
T Consensus        98 ~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~  172 (355)
T 2eu9_A           98 CIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCE  172 (355)
T ss_dssp             EEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred             EEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeccccccccccccccc
Confidence            9999999 55665666543 2245899999999999999999999988   9999999999999                


Q ss_pred             ---cCCCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCC
Q 043278          566 ---DDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRP  642 (752)
Q Consensus       566 ---~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~  642 (752)
                         +.++.+||+|||+++.....     .....||+.|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus       173 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  247 (355)
T 2eu9_A          173 EKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH  247 (355)
T ss_dssp             EEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence               67889999999999864322     2245789999999999999999999999999999999999999976542211


Q ss_pred             cchHHHHHHHhhC--------CCccc-ccCCCC---------------------CCCCCHHHHHHHHHHHHHcccCCCCC
Q 043278          643 LNLIGYAWQLLSD--------GKGLE-LIDPSL---------------------EQPCSANEVMRCIHVGLLCVQDQAMD  692 (752)
Q Consensus       643 ~~l~~~~~~~~~~--------~~~~~-~~d~~l---------------------~~~~~~~~~~~l~~l~~~Cl~~dp~~  692 (752)
                         ..........        ..... ......                     ...........+.+|+.+||+.||.+
T Consensus       248 ---~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  324 (355)
T 2eu9_A          248 ---LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ  324 (355)
T ss_dssp             ---HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred             ---HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence               1111111100        00000 000000                     01112334557889999999999999


Q ss_pred             CCCHHHHHHH
Q 043278          693 RPTMPEVVCM  702 (752)
Q Consensus       693 RPt~~ev~~~  702 (752)
                      |||+.|++++
T Consensus       325 Rpt~~e~l~h  334 (355)
T 2eu9_A          325 RITLAEALLH  334 (355)
T ss_dssp             SCCHHHHTTS
T ss_pred             CcCHHHHhcC
Confidence            9999999864


No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=5.1e-35  Score=311.04  Aligned_cols=251  Identities=22%  Similarity=0.311  Sum_probs=178.6

Q ss_pred             cCCCcCCeeecCCcccEEEEEec-CCceeEEEEcccCCcc-c-HHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEEe
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSGQ-G-IVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~~-~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  506 (752)
                      ++|+..+.||+|+||.||+++.. +++.||||++...... . ...+.++..++..++||||+++++++.+++..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e  104 (318)
T 2dyl_A           25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME  104 (318)
T ss_dssp             GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence            57888899999999999999975 6889999999765322 2 2334455567888899999999999999999999999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKY-SRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      |+ ++.+..+....  ...+++..+..++.||+.||.|||+. +   |+|+||||+|||++.++.+||+|||++......
T Consensus       105 ~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  178 (318)
T 2dyl_A          105 LM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD  178 (318)
T ss_dssp             CC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred             cc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence            99 45555544322  34589999999999999999999985 7   999999999999999999999999999765432


Q ss_pred             ccccccccccccCCccChhhhc-----cCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCccc
Q 043278          586 ESEANTKRIVGTYGYMSPEYAM-----SGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLE  660 (752)
Q Consensus       586 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~  660 (752)
                      .   ......+++.|+|||.+.     ...++.++||||||+++|||++|+.||......     ........... ...
T Consensus       179 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~-~~~  249 (318)
T 2dyl_A          179 K---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-----FEVLTKVLQEE-PPL  249 (318)
T ss_dssp             -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHHHHSC-CCC
T ss_pred             c---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-----HHHHHHHhccC-CCC
Confidence            2   122356899999999984     567899999999999999999999999753311     11112222221 111


Q ss_pred             ccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          661 LIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       661 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      +..       .......+.+++.+||+.||.+|||+.|++++
T Consensus       250 ~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          250 LPG-------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             CCS-------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             CCc-------cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            100       00112356788999999999999999999874


No 245
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=1.4e-35  Score=316.03  Aligned_cols=242  Identities=25%  Similarity=0.381  Sum_probs=197.3

Q ss_pred             HhcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCcc------cHHHHHHHHHHHHhcC--CCCcceeeeeeeeC
Q 043278          428 AANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQ------GIVEFKNEVRLIAKLQ--HTNLVRLLGCSLHG  498 (752)
Q Consensus       428 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~  498 (752)
                      ..++|.+.+.||+|+||.||+|+. .+++.||||++......      ....+.+|+.++.+++  |+||+++++++.+.
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~  120 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP  120 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence            457899999999999999999986 46889999998654321      2235678999999996  59999999999999


Q ss_pred             CeeEEEEeeCCC-CCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEec-CCCCceeccc
Q 043278          499 EERLLVYEFMPN-KSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLD-DKMNPKISDF  576 (752)
Q Consensus       499 ~~~~lv~E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~-~~~~~kl~DF  576 (752)
                      +..++|+|++.. ++|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++ +++.+||+||
T Consensus       121 ~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Df  194 (320)
T 3a99_A          121 DSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDF  194 (320)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCC
T ss_pred             CcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeC
Confidence            999999999976 8999998653   35899999999999999999999998   99999999999999 7899999999


Q ss_pred             ccceeecccccccccccccccCCccChhhhccCCC-CccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhC
Q 043278          577 GMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIV-SIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSD  655 (752)
Q Consensus       577 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~  655 (752)
                      |+++......    .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||....            .....
T Consensus       195 g~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~~~~~  258 (320)
T 3a99_A          195 GSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EIIRG  258 (320)
T ss_dssp             TTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHC
T ss_pred             cccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------------hhhcc
Confidence            9998764322    223568999999999987765 788999999999999999999985431            11111


Q ss_pred             CCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          656 GKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       656 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                       ..  ...    ...    ...+.+++.+||+.||++|||+.|+++.
T Consensus       259 -~~--~~~----~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          259 -QV--FFR----QRV----SSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             -CC--CCS----SCC----CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -cc--ccc----ccC----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             10  011    111    2357789999999999999999999884


No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=2e-35  Score=337.58  Aligned_cols=264  Identities=24%  Similarity=0.289  Sum_probs=197.8

Q ss_pred             hcCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccC-CcccHHHHHHHHHHHHhcCCCCcceeeeeeee------CCe
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRS-SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSLH------GEE  500 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~  500 (752)
                      .++|.+.+.||+|+||.||+|.. .+++.||||++... .......+.+|+.++.+++||||+++++++..      ++.
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            37899999999999999999987 45889999998764 33445678999999999999999999998765      667


Q ss_pred             eEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCC---ceecccc
Q 043278          501 RLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMN---PKISDFG  577 (752)
Q Consensus       501 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~---~kl~DFg  577 (752)
                      .++||||+++|+|.+++........+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.   +||+|||
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEcccc
Confidence            8999999999999999977555556999999999999999999999988   999999999999997665   8999999


Q ss_pred             cceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCc--ch-HHHHHHHhh
Q 043278          578 MARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPL--NL-IGYAWQLLS  654 (752)
Q Consensus       578 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~--~l-~~~~~~~~~  654 (752)
                      ++.......   ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.........  .. .........
T Consensus       170 ~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~  246 (676)
T 3qa8_A          170 YAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV  246 (676)
T ss_dssp             CCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred             ccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence            998654332   223467899999999999999999999999999999999999999653210000  00 000000000


Q ss_pred             CCCcccc--cCCCC--CCCCCHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 043278          655 DGKGLEL--IDPSL--EQPCSANEVMRCIHVGLLCVQDQAMDRPTMPE  698 (752)
Q Consensus       655 ~~~~~~~--~d~~l--~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~e  698 (752)
                      .......  ....+  ...........+.+++.+|++.||.+|||+.|
T Consensus       247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e  294 (676)
T 3qa8_A          247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ  294 (676)
T ss_dssp             CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred             hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence            0000000  00000  11233445677889999999999999999976


No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=3.2e-34  Score=300.15  Aligned_cols=230  Identities=11%  Similarity=0.061  Sum_probs=182.3

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecC-CceeEEEEcccCCcc---cHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEE
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLAD-EQEVAIKRLSRSSGQ---GIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  504 (752)
                      .++|.+.+.||+|+||.||+|.... ++.||||++......   ....+.+|+..+.+++|+||+++++++.+++..++|
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  109 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV  109 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence            3679999999999999999999754 889999999765332   346789999999999999999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||+++++|.+++..    . ....++..++.||+.||+|||+++   |+||||||+|||++.++.+||++++       
T Consensus       110 ~e~~~g~~L~~~l~~----~-~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~-------  174 (286)
T 3uqc_A          110 AEWIRGGSLQEVADT----S-PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA-------  174 (286)
T ss_dssp             EECCCEEEHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred             EEecCCCCHHHHHhc----C-CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc-------
Confidence            999999999999832    1 356678899999999999999998   9999999999999999999997543       


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCC
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDP  664 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~  664 (752)
                                     |++|       ++.++||||||+++|||++|+.||............   .... .+.   ...+
T Consensus       175 ---------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---~~~~-~~~---~~~~  225 (286)
T 3uqc_A          175 ---------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---ERDT-AGQ---PIEP  225 (286)
T ss_dssp             ---------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---CBCT-TSC---BCCH
T ss_pred             ---------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---HHHh-ccC---CCCh
Confidence                           3443       689999999999999999999999876543321000   0000 000   0000


Q ss_pred             CCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhcC
Q 043278          665 SLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVCMLQNE  706 (752)
Q Consensus       665 ~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~L~~~  706 (752)
                      .   .........+.+++.+||+.||.+| |+.|+++.|+..
T Consensus       226 ~---~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~  263 (286)
T 3uqc_A          226 A---DIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQA  263 (286)
T ss_dssp             H---HHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHH
T ss_pred             h---hcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHH
Confidence            0   0001122457789999999999999 999999999875


No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.1e-34  Score=340.28  Aligned_cols=237  Identities=20%  Similarity=0.279  Sum_probs=190.7

Q ss_pred             cCCCcCCeeecCCcccEEEEEec--CCceeEEEEcccCC-cccHHHHHHHHHHHHhcCCCCcceeeeeeeeCCe-----e
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLA--DEQEVAIKRLSRSS-GQGIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEE-----R  501 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~--~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~  501 (752)
                      ++|.+.+.||+|+||.||++...  +++.||||++.... ......+.+|+.++.+++||||+++++++.+.+.     .
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            67889999999999999999875  58899999986543 3345578899999999999999999999987665     6


Q ss_pred             EEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          502 LLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       502 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                      +|||||+++++|.+++..     .+++..++.++.||+.||.|||+++   |+||||||+|||++.+ .+||+|||+++.
T Consensus       160 ~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~  230 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSR  230 (681)
T ss_dssp             EEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             EEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchh
Confidence            999999999999887632     5999999999999999999999998   9999999999999986 899999999986


Q ss_pred             ecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccc
Q 043278          582 FEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLEL  661 (752)
Q Consensus       582 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~  661 (752)
                      ....      ....||+.|+|||++.+.. +.++||||||++++||++|..|+.........                  
T Consensus       231 ~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~------------------  285 (681)
T 2pzi_A          231 INSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLP------------------  285 (681)
T ss_dssp             TTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSCC------------------
T ss_pred             cccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccccc------------------
Confidence            5432      3457899999999987765 89999999999999999998887643211100                  


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHhhc
Q 043278          662 IDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPT-MPEVVCMLQN  705 (752)
Q Consensus       662 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt-~~ev~~~L~~  705 (752)
                           ...........+.+++.+|++.||.+||+ ++++...|..
T Consensus       286 -----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          286 -----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             -----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             -----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence                 00001122346778999999999999995 5556665543


No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=9.9e-35  Score=320.32  Aligned_cols=241  Identities=15%  Similarity=0.142  Sum_probs=179.4

Q ss_pred             cCCCcCCeeecCCcccEEEEEe-cCCceeEEEEcccCCc---ccHHHHHHHHHHHHhcCC-CCcceeeee----------
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSG---QGIVEFKNEVRLIAKLQH-TNLVRLLGC----------  494 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h-~niv~l~~~----------  494 (752)
                      ..|...+.||+|+||.||+|+. .+|+.||||++.....   ...+.+.+|+.++..++| +|...+..+          
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            4566678999999999999995 5689999999874322   235678999999999987 322111111          


Q ss_pred             -----------eee-----CCeeEEEEeeCCCCCHhHHHhh----cCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEe
Q 043278          495 -----------SLH-----GEERLLVYEFMPNKSLDFFLFN----SGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVI  554 (752)
Q Consensus       495 -----------~~~-----~~~~~lv~E~~~~gsL~~~l~~----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ii  554 (752)
                                 +..     ....+++|+++ .++|.+++..    ......+++..++.++.||++||+|||+.+   |+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ii  233 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LV  233 (413)
T ss_dssp             ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred             ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence                       111     12346677754 6889888742    223455888999999999999999999998   99


Q ss_pred             ecCCCCCcEEecCCCCceecccccceeecccccccccccccccCCccChhhh----------ccCCCCccchhHHHHHHH
Q 043278          555 HRDLKASNILLDDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYA----------MSGIVSIKTDVFSFGVLV  624 (752)
Q Consensus       555 H~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~t~k~DV~S~G~vl  624 (752)
                      ||||||+||||+.++.+||+|||+++.....     .....| +.|+|||++          ....++.++|||||||++
T Consensus       234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil  307 (413)
T 3dzo_A          234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI  307 (413)
T ss_dssp             CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred             cCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence            9999999999999999999999999864422     233567 999999999          555688999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 043278          625 LEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCIHVGLLCVQDQAMDRPTMPEVVC  701 (752)
Q Consensus       625 ~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~  701 (752)
                      |||++|+.||..........               .++...  ...+    ..+.+|+.+||+.||++|||+.|+++
T Consensus       308 ~elltg~~Pf~~~~~~~~~~---------------~~~~~~--~~~~----~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          308 YWIWCADLPNTDDAALGGSE---------------WIFRSC--KNIP----QPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HHHHHSSCCCCTTGGGSCSG---------------GGGSSC--CCCC----HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHCCCCCCCcchhhhHH---------------HHHhhc--ccCC----HHHHHHHHHHccCChhhCcCHHHHHh
Confidence            99999999997654322111               111100  1112    45778999999999999999877654


No 250
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=2.3e-33  Score=295.85  Aligned_cols=227  Identities=20%  Similarity=0.251  Sum_probs=177.0

Q ss_pred             cCCCcC-CeeecCCcccEEEEEe-cCCceeEEEEcccCCcccHHHHHHHHHHH-HhcCCCCcceeeeeeee----CCeeE
Q 043278          430 NNFSTT-NKLGEGGFGPVYKGKL-ADEQEVAIKRLSRSSGQGIVEFKNEVRLI-AKLQHTNLVRLLGCSLH----GEERL  502 (752)
Q Consensus       430 ~~~~~~-~~LG~G~fg~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~~  502 (752)
                      ++|.+. +.||+|+||.||++.. .+++.||+|++...     ..+.+|+.++ ...+||||+++++++..    +...+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            456665 7799999999999987 46889999998642     3567888888 55699999999999876    67789


Q ss_pred             EEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecC---CCCceecccccc
Q 043278          503 LVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDD---KMNPKISDFGMA  579 (752)
Q Consensus       503 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~---~~~~kl~DFgla  579 (752)
                      +||||+++++|.+++.... ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.   ++.+||+|||++
T Consensus        92 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a  167 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFA  167 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence            9999999999999997643 345899999999999999999999998   999999999999998   789999999998


Q ss_pred             eeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcc
Q 043278          580 RIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGL  659 (752)
Q Consensus       580 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~  659 (752)
                      ....                        +..++.++||||||+++|||++|+.||.........           .....
T Consensus       168 ~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-----------~~~~~  212 (299)
T 3m2w_A          168 KETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----------PGMKT  212 (299)
T ss_dssp             EECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCC
T ss_pred             cccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-----------HHHHH
Confidence            7532                        234678999999999999999999999765422110           00000


Q ss_pred             cccCCCCCCCCCH----HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 043278          660 ELIDPSLEQPCSA----NEVMRCIHVGLLCVQDQAMDRPTMPEVVCM  702 (752)
Q Consensus       660 ~~~d~~l~~~~~~----~~~~~l~~l~~~Cl~~dp~~RPt~~ev~~~  702 (752)
                      .+.....  ..+.    .....+.+++.+|++.||.+|||+.|++++
T Consensus       213 ~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          213 RIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             SSCTTCC--SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHhhccc--cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            0000000  1111    123467789999999999999999999885


No 251
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=5.5e-34  Score=305.83  Aligned_cols=243  Identities=15%  Similarity=0.125  Sum_probs=181.9

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCC--------cccHHHHHHHHHHHHhcC---------CCCccee
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSS--------GQGIVEFKNEVRLIAKLQ---------HTNLVRL  491 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l  491 (752)
                      .++|.+.+.||+|+||+||+|+. +++.||||++....        ......+.+|+.++++++         |+||+++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            35688889999999999999998 77999999997652        233477899999999886         5555555


Q ss_pred             eee-----------------eee-------------CCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHH
Q 043278          492 LGC-----------------SLH-------------GEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQG  541 (752)
Q Consensus       492 ~~~-----------------~~~-------------~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~  541 (752)
                      .+.                 +.+             .+..+|||||+++|++.+.+..    ..+++..+..++.||+.|
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a  173 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS  173 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence            554                 433             6789999999999976665522    458999999999999999


Q ss_pred             HHHHH-hcCCCcEeecCCCCCcEEecCCC--------------------CceecccccceeecccccccccccccccCCc
Q 043278          542 LLYLH-KYSRLRVIHRDLKASNILLDDKM--------------------NPKISDFGMARIFEVNESEANTKRIVGTYGY  600 (752)
Q Consensus       542 l~~LH-~~~~~~iiH~Dikp~NIll~~~~--------------------~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y  600 (752)
                      |+||| +.+   |+||||||+||||+.++                    .+||+|||+++.....       ...||+.|
T Consensus       174 L~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y  243 (336)
T 2vuw_A          174 LAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVS  243 (336)
T ss_dssp             HHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCT
T ss_pred             HHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecc
Confidence            99999 888   99999999999999887                    8999999999875432       35789999


Q ss_pred             cChhhhccCCCCccchhHHHHHH-HHHHHhCCCCCCCCCCCCCcchHHHHHHHhhCCCcccccCCCCCCCCCHHHHHHHH
Q 043278          601 MSPEYAMSGIVSIKTDVFSFGVL-VLEIVSGQKNHTRHHPDRPLNLIGYAWQLLSDGKGLELIDPSLEQPCSANEVMRCI  679 (752)
Q Consensus       601 ~aPE~~~~~~~t~k~DV~S~G~v-l~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~  679 (752)
                      +|||++.+.. +.++||||++++ .+++++|..||....     .+.............    ...............+.
T Consensus       244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~-----~~~~~~~~~~~~~~~----~~~~~~~~~~~~s~~~~  313 (336)
T 2vuw_A          244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL-----WLHYLTDKMLKQMTF----KTKCNTPAMKQIKRKIQ  313 (336)
T ss_dssp             TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH-----HHHHHHHHHHHTCCC----SSCCCSHHHHHHHHHHH
T ss_pred             cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh-----hhhHHHHhhhhhhcc----CcccchhhhhhcCHHHH
Confidence            9999998766 899999998777 777888888773210     000001111111110    01111111234566788


Q ss_pred             HHHHHcccCCCCCCCCHHHHH-H
Q 043278          680 HVGLLCVQDQAMDRPTMPEVV-C  701 (752)
Q Consensus       680 ~l~~~Cl~~dp~~RPt~~ev~-~  701 (752)
                      +|+.+||+.|     |+.|++ +
T Consensus       314 dli~~~L~~d-----sa~e~l~~  331 (336)
T 2vuw_A          314 EFHRTMLNFS-----SATDLLCQ  331 (336)
T ss_dssp             HHHHHGGGSS-----SHHHHHHH
T ss_pred             HHHHHHhccC-----CHHHHHhc
Confidence            9999999966     999988 5


No 252
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1
Probab=99.97  E-value=7.9e-31  Score=264.90  Aligned_cols=194  Identities=16%  Similarity=0.209  Sum_probs=142.0

Q ss_pred             CCCeEEeeeeCCCCCCCCccEEEEecCCCCCCcCccccCCCCCCCCCccEEeccCCCCCCCCCceEEEecCCCcEEEEcC
Q 043278            6 AFGNFKLGFFSPASSTTTERYLGIWHDTAPDTLGWYFRPFLPRYQTDEPIWIANRNTPILDQSGVLTIDSIDGNLKILHN   85 (752)
Q Consensus         6 ~~g~F~lGFf~~~~~~~~~~ylgIw~~~~~~~~~~~~~~~~~~~~~~t~vWvANr~~Pv~~~~~~l~~~~~~g~L~l~~~   85 (752)
                      ++|.|+|||+.+++       +. +|..                  +|+||+|||+.|   ..++|+|.. ||||||.|.
T Consensus        24 ~~g~f~l~f~~~gn-------l~-ly~~------------------~~~vW~an~~~~---~~~~l~l~~-dGnLvl~d~   73 (236)
T 1dlp_A           24 ELSSFRFTMQSDCN-------LV-LFDS------------------DVRVWASNTAGA---TGCRAVLQS-DGLLVILTA   73 (236)
T ss_dssp             CSTTEEEEECTTSC-------EE-EEES------------------SSEEECCCCCSC---SCCBCCBCS-SSCBCCBCT
T ss_pred             EcCCEEEEECCCCc-------EE-EEEC------------------CEEEEECCCCCC---CCeEEEEcC-CCcEEEEcC
Confidence            48999999986542       22 3431                  499999999998   447899998 999999999


Q ss_pred             CCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeeccCCCccc-CCCCeecccc-ccCc-----eeEEEE
Q 043278           86 GGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFDYPTDTL-LPGMKLGINL-QTGH-----QWFLQS  158 (752)
Q Consensus        86 ~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd~PTDTl-Lpg~kl~~~~-~tg~-----~~~L~S  158 (752)
                      +|+++|++++........|+|+|+|||||++        .++||||||||||+ ||+|  |.|. .+|+     +++|+|
T Consensus        74 ~~~~vW~s~~~~~~~~~~~~l~d~Gnlvl~~--------~~~W~S~~~p~~t~~lp~~--g~d~L~~gq~~~~~~~~L~s  143 (236)
T 1dlp_A           74 QNTIRWSSGTKGSIGNYVLVLQPDRTVTIYG--------PGLWDSGTSNKGSVVVANN--GNSILYSTQGNDNHPQTLHA  143 (236)
T ss_dssp             TTCCSCCCCCCCCSSCCEEEECSSSCEEEEC--------SEEEECSCCCSSCCCCSSC--CCEECCCC--CCCCCCEECS
T ss_pred             CCcEEEeCCccccCCcEEEEEeCCCCEEEec--------CCEEECCCCCCcccccCCc--cceEEecCCcCCCccceEEc
Confidence            9999998876433344579999999999983        28999999999888 7776  6666 6666     567874


Q ss_pred             ecCCCCCCCCCcEEeeecCCCceeEEEecCceEEEecccccCCccccccc---cceEEEEEecCceEEEEEEccCCceee
Q 043278          159 WLDYSSPAQGSFTLGIEPNATNQLIIRWRRETIYWTSGLLLNGNFNFSRS---WNLSFSYTSNEQEKYFEYSLNEGVTSS  235 (752)
Q Consensus       159 w~s~~dps~G~f~l~~~~~g~~~~~~~~~~~~~yw~~g~~~~~~~~~~~~---~~~~~~~~~n~~e~~~~~~~~~~~~~~  235 (752)
                         .+||++|.|+|+++++|  +++++. +..+||++++|++. +...+.   ....+.|..++++.+++|......  .
T Consensus       144 ---~~d~s~G~~~l~l~~dG--~LvL~~-~~~~~W~s~~~~~~-~~~~~~L~~~Gnl~ly~~~~~~vw~s~~~~~~~--~  214 (236)
T 1dlp_A          144 ---TQSLQLSPYRLSMETDC--NLVLFD-RDDRVWSTNTAGKG-TGCRAVLQPNGRMDVLTNQNIAVWTSGNSRSAG--R  214 (236)
T ss_dssp             ---SCCCBCSSCEEEEETTT--EEEEEB-TTBCCSCCCCCSSC-SSCEEEEETTTEEEEEETTTEEEEECCCCCSSS--C
T ss_pred             ---CcEeecCcEEEEECCCC--cEEEEc-CCEeEEeCCCcCCC-CceEEEECCCCcEEEEeCCCcEEEEeCCCCCCC--C
Confidence               78999999999999999  677754 55789999998653 222111   111233444556666666544322  2


Q ss_pred             EEEEECCCCcccc
Q 043278          236 VFLRIDPEGALSD  248 (752)
Q Consensus       236 ~~~~l~~~G~l~~  248 (752)
                      .+++|+.+|.++.
T Consensus       215 ~rl~Ld~dG~l~l  227 (236)
T 1dlp_A          215 YVFVLQPDRNLAI  227 (236)
T ss_dssp             CEEEECSSSCEEE
T ss_pred             EEEEEcCCCcEEE
Confidence            4689999998763


No 253
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94  E-value=7.6e-28  Score=274.62  Aligned_cols=183  Identities=16%  Similarity=0.145  Sum_probs=129.0

Q ss_pred             eeecCCcccEEEEE-ecCCceeEEEEcccCC----------cccHHHHHHHHHHHHhc-CCCCcceeeeeeeeCCeeEEE
Q 043278          437 KLGEGGFGPVYKGK-LADEQEVAIKRLSRSS----------GQGIVEFKNEVRLIAKL-QHTNLVRLLGCSLHGEERLLV  504 (752)
Q Consensus       437 ~LG~G~fg~Vy~~~-~~~~~~vavK~l~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  504 (752)
                      .++.|+.|.+..++ .--|+.+++|.+....          ....++|.+|+++|+++ .|+||+++++++.+++..+||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            45667777666654 3458889999986542          12345699999999999 799999999999999999999


Q ss_pred             EeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeecc
Q 043278          505 YEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEV  584 (752)
Q Consensus       505 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~  584 (752)
                      |||++|++|.+.|...   ..++..   +|+.||+.||+|||+++   ||||||||+||||++++.+||+|||+|+....
T Consensus       321 MEyv~G~~L~d~i~~~---~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~  391 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAG---EEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ  391 (569)
T ss_dssp             EECCCSEEHHHHHHTT---CCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred             EecCCCCcHHHHHHhC---CCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence            9999999999999643   345543   58899999999999999   99999999999999999999999999986543


Q ss_pred             cccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCC
Q 043278          585 NESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQ  631 (752)
Q Consensus       585 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~  631 (752)
                      ..  ......+||+.|||||++.+ .+..++|+||+|++++++.++.
T Consensus       392 ~~--~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          392 DC--SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             ----CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred             CC--ccccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence            32  22334789999999998875 4677899999999998886653


No 254
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91  E-value=2.7e-25  Score=252.13  Aligned_cols=184  Identities=18%  Similarity=0.196  Sum_probs=146.4

Q ss_pred             cCCeeecCCcccEEEEEecCCceeEEEEcccCCcc--------cHHHHHHHHHHHHhcCCCCcceeeeeeeeCCeeEEEE
Q 043278          434 TTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQ--------GIVEFKNEVRLIAKLQHTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       434 ~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ..+.||+|+||.||++.. .++.+++|+.......        ..+++.+|++++.+++||||+++..++...+..+|||
T Consensus       340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            357899999999999954 5678888876443211        1345799999999999999997777777788889999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccc
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVN  585 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~  585 (752)
                      ||+++++|.+++..           ++.++.||++||+|||+++   |+||||||+|||+++  .+||+|||+++.....
T Consensus       419 E~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~  482 (540)
T 3en9_A          419 SYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD  482 (540)
T ss_dssp             ECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred             ECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence            99999999999843           5689999999999999998   999999999999999  9999999999987543


Q ss_pred             cccc-----ccccccccCCccChhhhcc--CCCCccchhHHHHHHHHHHHhCCCCC
Q 043278          586 ESEA-----NTKRIVGTYGYMSPEYAMS--GIVSIKTDVFSFGVLVLEIVSGQKNH  634 (752)
Q Consensus       586 ~~~~-----~~~~~~gt~~y~aPE~~~~--~~~t~k~DV~S~G~vl~elltG~~p~  634 (752)
                      ....     ......||+.|||||++..  ..|+.++|+||..+-.++.+.++.++
T Consensus       483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            2211     1235689999999999987  56888999999999999988877665


No 255
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86  E-value=2.3e-22  Score=209.13  Aligned_cols=154  Identities=18%  Similarity=0.142  Sum_probs=123.3

Q ss_pred             HHHHHHHhcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCc------------------ccHHHHHHHHHHHHhc
Q 043278          422 FQTIAAAANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSG------------------QGIVEFKNEVRLIAKL  483 (752)
Q Consensus       422 ~~~i~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~------------------~~~~~~~~E~~~l~~l  483 (752)
                      +..+......|.+.+.||+|+||.||+|...+|+.||||.++....                  .....+.+|+.++.++
T Consensus        82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l  161 (282)
T 1zar_A           82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL  161 (282)
T ss_dssp             HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence            3444555666777799999999999999997799999999864321                  1245689999999999


Q ss_pred             CCCCcceeeeeeeeCCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcE
Q 043278          484 QHTNLVRLLGCSLHGEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNI  563 (752)
Q Consensus       484 ~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NI  563 (752)
                      +  | +++.+++.. +..++||||+++++|.+ +..         .....++.||+.||.|||+.+   |+||||||+||
T Consensus       162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NI  224 (282)
T 1zar_A          162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNV  224 (282)
T ss_dssp             T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSE
T ss_pred             c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHE
Confidence            9  5 677775543 56799999999999987 411         234579999999999999998   99999999999


Q ss_pred             EecCCCCceecccccceeecccccccccccccccCCccChhhhcc
Q 043278          564 LLDDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMS  608 (752)
Q Consensus       564 ll~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  608 (752)
                      |++ ++.+||+|||+++.               +..++|||++..
T Consensus       225 Ll~-~~~vkl~DFG~a~~---------------~~~~~a~e~l~r  253 (282)
T 1zar_A          225 LVS-EEGIWIIDFPQSVE---------------VGEEGWREILER  253 (282)
T ss_dssp             EEE-TTEEEECCCTTCEE---------------TTSTTHHHHHHH
T ss_pred             EEE-CCcEEEEECCCCeE---------------CCCCCHHHHHHH
Confidence            999 99999999999973               335789998753


No 256
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.74  E-value=2.6e-18  Score=176.33  Aligned_cols=136  Identities=17%  Similarity=0.177  Sum_probs=106.1

Q ss_pred             CCcCCeeecCCcccEEEEEe-cCCce--eEEEEcccCCcc------------------------cHHHHHHHHHHHHhcC
Q 043278          432 FSTTNKLGEGGFGPVYKGKL-ADEQE--VAIKRLSRSSGQ------------------------GIVEFKNEVRLIAKLQ  484 (752)
Q Consensus       432 ~~~~~~LG~G~fg~Vy~~~~-~~~~~--vavK~l~~~~~~------------------------~~~~~~~E~~~l~~l~  484 (752)
                      |.+.+.||+|+||.||+|.. .+|+.  ||||+++.....                        ....+.+|+..+.+++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56778999999999999997 68888  999987543111                        1135789999999998


Q ss_pred             CCCc--ceeeeeeeeCCeeEEEEeeCCC-C----CHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCcEeec
Q 043278          485 HTNL--VRLLGCSLHGEERLLVYEFMPN-K----SLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLH-KYSRLRVIHR  556 (752)
Q Consensus       485 h~ni--v~l~~~~~~~~~~~lv~E~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~iiH~  556 (752)
                      |+++  ..++.+    +..+|||||+.. |    +|.+....      .++..+..++.||+.+|.||| +.+   |+||
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~g---ivHr  195 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEAE---LVHA  195 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTSC---EECS
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHCC---EEeC
Confidence            8764  334432    357899999942 4    66665422      234467789999999999999 887   9999


Q ss_pred             CCCCCcEEecCCCCceecccccceee
Q 043278          557 DLKASNILLDDKMNPKISDFGMARIF  582 (752)
Q Consensus       557 Dikp~NIll~~~~~~kl~DFgla~~~  582 (752)
                      ||||+|||++.  .++|+|||++...
T Consensus       196 Dlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          196 DLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             SCSTTSEEESS--SEEECCCTTCEET
T ss_pred             CCCHHHEEEcC--cEEEEECcccccC
Confidence            99999999998  9999999999753


No 257
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=99.65  E-value=5.9e-16  Score=134.05  Aligned_cols=90  Identities=18%  Similarity=0.307  Sum_probs=72.8

Q ss_pred             EeeCCCeEEeeeeCCCCCCCCccEEEEecCCCCCCcCccccCCCCCCCCCccEEeccCCCCCCCCCceEEEecCCCcEEE
Q 043278            3 LVSAFGNFKLGFFSPASSTTTERYLGIWHDTAPDTLGWYFRPFLPRYQTDEPIWIANRNTPILDQSGVLTIDSIDGNLKI   82 (752)
Q Consensus         3 lvS~~g~F~lGFf~~~~~~~~~~ylgIw~~~~~~~~~~~~~~~~~~~~~~t~vWvANr~~Pv~~~~~~l~~~~~~g~L~l   82 (752)
                      |+|  |.|.|.|...+       .|.++..                   .++||+|||++|..++ +.|.|.. ||||||
T Consensus        16 L~s--g~y~l~~q~Dg-------NLvly~~-------------------~~~vW~ant~~~~~~~-~~L~l~~-dGnLvL   65 (105)
T 4h3o_A           16 LDV--EPYHFIMQDDC-------NLVLYDH-------------------STSTWASNTEIGGKSG-CSAVLQS-DGNFVV   65 (105)
T ss_dssp             EEE--TTEEEEECTTS-------CEEEEET-------------------TEEEEECCCCCTTCCS-CEEEECT-TSCEEE
T ss_pred             EEE--CCEEEEECCCC-------eEEEEEC-------------------CEEEEEecCCCCCCcc-EEEEEeC-CccEEE
Confidence            455  78999887443       3666543                   4889999999998776 6899998 999999


Q ss_pred             EcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeee
Q 043278           83 LHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQS  130 (752)
Q Consensus        83 ~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQS  130 (752)
                      .|.+|+++|+++++.......|+|+|+|||||++        ..+|||
T Consensus        66 ~d~~~~~vWss~t~~~~~~~~l~L~ddGNlVly~--------~~~W~S  105 (105)
T 4h3o_A           66 YDSSGRSLWASHSTRGSGNYILILQDDGNVIIYG--------SDIWST  105 (105)
T ss_dssp             ECTTCCEEEECCCCCCSSCEEEEECTTSCEEEEE--------SEEEEC
T ss_pred             ECCCcEEEEEecCCCCCCCEEEEEeCCCeEEEEC--------CcEecC
Confidence            9999999999887555556679999999999984        269998


No 258
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=99.63  E-value=9.6e-16  Score=136.01  Aligned_cols=92  Identities=20%  Similarity=0.321  Sum_probs=75.0

Q ss_pred             eEe--eCCCeEEeeeeCCCCCCCCccEEEEecCCCCCCcCccccCCCCCCCCCccEEeccCCCCCCCCCceEEEecCCCc
Q 043278            2 LLV--SAFGNFKLGFFSPASSTTTERYLGIWHDTAPDTLGWYFRPFLPRYQTDEPIWIANRNTPILDQSGVLTIDSIDGN   79 (752)
Q Consensus         2 ~lv--S~~g~F~lGFf~~~~~~~~~~ylgIw~~~~~~~~~~~~~~~~~~~~~~t~vWvANr~~Pv~~~~~~l~~~~~~g~   79 (752)
                      .|+  |++|.|+|+|+.+++     .   +||++                  .++||+|||+.|  +.++.|.|.. |||
T Consensus        22 ~l~~~S~~g~~~L~~~~dgn-----l---vly~~------------------~~~vW~sn~~~~--~~~~~l~l~~-dGN   72 (119)
T 1b2p_A           22 SLEILFGTHVYRFIMQTDCN-----L---VLYDN------------------NNPIWATNTGGL--GNGCRAVLQP-DGV   72 (119)
T ss_dssp             EEEEEETTEEEEEEECTTSC-----E---EEEET------------------TEEEEECCCTTS--CSSCEEEECT-TSC
T ss_pred             EEEEeCCCCCEEEEEecCCC-----E---EEEEC------------------CEEEEeCCCccC--CCceEEEEcc-CCE
Confidence            477  999999999998653     2   57863                  489999999977  3346899987 999


Q ss_pred             EEEEcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeee
Q 043278           80 LKILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQS  130 (752)
Q Consensus        80 L~l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQS  130 (752)
                      |||.|.+|.++|.+.+....+...++|+|+|||||++        .++|||
T Consensus        73 LVl~d~~~~~lW~S~~~~~~g~~~l~l~~~Gnlvl~~--------~~~W~S  115 (119)
T 1b2p_A           73 LVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYG--------DALWAT  115 (119)
T ss_dssp             EEEECTTCCEEEECSCCCCSSCEEEEECTTSCEEEEE--------SEEEEC
T ss_pred             EEEEeCCCcEEEcCCCCCCCCCEEEEEECCCcEEEEC--------ccEeCC
Confidence            9999999999998876544445679999999999985        279998


No 259
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=99.63  E-value=1e-15  Score=134.80  Aligned_cols=99  Identities=18%  Similarity=0.364  Sum_probs=79.4

Q ss_pred             CCCCCCCCceEEEecCCCcEEEEcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeeccCCCcccCC
Q 043278           61 NTPILDQSGVLTIDSIDGNLKILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFDYPTDTLLP  140 (752)
Q Consensus        61 ~~Pv~~~~~~l~~~~~~g~L~l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd~PTDTlLp  140 (752)
                      +.|+.+...+|.|.. ||||+|.+. +.++|++++........|+|+|+|||||++ +     +.++||||+        
T Consensus        13 g~~L~~~~~~L~~~~-dgnlvl~~~-~~~vW~sn~~~~~~~~~l~l~~~GNLvl~d-~-----~~~~W~S~~--------   76 (112)
T 1xd5_A           13 GGSLAEGGYLFIIQN-DCNLVLYDN-NRAVWASGTNGKASGCVLKMQNDGNLVIYS-G-----SRAIWASNT--------   76 (112)
T ss_dssp             TCEEEETTEEEEECT-TSCEEEEET-TEEEEECCCTTSCSSEEEEECTTSCEEEEE-T-----TEEEEECCC--------
T ss_pred             CCEEeCCCEEEEEcC-CCcEEEEEC-CEEEEeCCCcCCCCCEEEEEeCCCCEEEEc-C-----CEEEEECCc--------
Confidence            345555567899988 999999987 788898886533334679999999999997 4     469999993        


Q ss_pred             CCeeccccccCceeEEEEecCCCCCCCCCcEEeeecCCCceeEEEecCceEEEecccccC
Q 043278          141 GMKLGINLQTGHQWFLQSWLDYSSPAQGSFTLGIEPNATNQLIIRWRRETIYWTSGLLLN  200 (752)
Q Consensus       141 g~kl~~~~~tg~~~~L~Sw~s~~dps~G~f~l~~~~~g~~~~~~~~~~~~~yw~~g~~~~  200 (752)
                                             +|++|.|++.++++|.  ++++.....+||++++|.+
T Consensus        77 -----------------------~~~~g~~~l~l~~dGn--lvl~~~~~~~~W~S~~~~g  111 (112)
T 1xd5_A           77 -----------------------NRQNGNYYLILQRDRN--VVIYDNSNNAIWATHTNVG  111 (112)
T ss_dssp             -----------------------CCSCCCCEEEECTTSC--EEEECTTSCEEEECCCCCC
T ss_pred             -----------------------cCCCCCEEEEEeCCCc--EEEECCCCceEEECCCccC
Confidence                                   4567899999999995  6666666789999999876


No 260
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62  E-value=1.8e-16  Score=169.07  Aligned_cols=139  Identities=14%  Similarity=0.131  Sum_probs=98.8

Q ss_pred             hcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCc--------------ccHHHH--------HHHHHHHHhcCCC
Q 043278          429 ANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSG--------------QGIVEF--------KNEVRLIAKLQHT  486 (752)
Q Consensus       429 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~--------------~~~~~~--------~~E~~~l~~l~h~  486 (752)
                      ..-|++.+.||+|++|.||+|...+|+.||||+++....              ......        .+|...|.++.+.
T Consensus        94 g~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~  173 (397)
T 4gyi_A           94 KDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE  173 (397)
T ss_dssp             TSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            334899999999999999999998999999998753210              011111        3455555555443


Q ss_pred             CcceeeeeeeeCCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEec
Q 043278          487 NLVRLLGCSLHGEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLD  566 (752)
Q Consensus       487 niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~  566 (752)
                      ++.-..-+.  ....+|||||+++++|..+..         .+....++.||+.+|.+||+.+   ||||||||.||||+
T Consensus       174 gv~vp~p~~--~~~~~LVME~i~G~~L~~l~~---------~~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~  239 (397)
T 4gyi_A          174 GFPVPEPIA--QSRHTIVMSLVDALPMRQVSS---------VPDPASLYADLIALILRLAKHG---LIHGDFNEFNILIR  239 (397)
T ss_dssp             TCSCCCEEE--EETTEEEEECCSCEEGGGCCC---------CSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE
T ss_pred             CCCCCeeee--ccCceEEEEecCCccHhhhcc---------cHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEe
Confidence            322111111  123479999999988855431         1234568899999999999988   99999999999998


Q ss_pred             CCCC----------ceeccccccee
Q 043278          567 DKMN----------PKISDFGMARI  581 (752)
Q Consensus       567 ~~~~----------~kl~DFgla~~  581 (752)
                      +++.          +.|+||+-+..
T Consensus       240 ~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          240 EEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             EEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             CCCCcccccccccceEEEEeCCccc
Confidence            8774          78999997764


No 261
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=99.62  E-value=1.5e-15  Score=132.99  Aligned_cols=96  Identities=22%  Similarity=0.323  Sum_probs=76.6

Q ss_pred             eEeeCCCeEEeeeeCCCCCCCCccEEEEecCCCCCCcCccccCCCCCCCCCccEEeccCCCCCCCCCceEEEecCCCcEE
Q 043278            2 LLVSAFGNFKLGFFSPASSTTTERYLGIWHDTAPDTLGWYFRPFLPRYQTDEPIWIANRNTPILDQSGVLTIDSIDGNLK   81 (752)
Q Consensus         2 ~lvS~~g~F~lGFf~~~~~~~~~~ylgIw~~~~~~~~~~~~~~~~~~~~~~t~vWvANr~~Pv~~~~~~l~~~~~~g~L~   81 (752)
                      .|+ ++|.|+|+|+..++     .   |||+.                  .++||.||++.|-  ..+.|.|.. |||||
T Consensus        15 ~l~-~~~~~~l~~~~dGn-----l---vl~~~------------------~~~vW~sn~~~~~--~~~~l~l~~-dGNLV   64 (110)
T 3a0c_A           15 SLE-VGPSYRLIMQGDCN-----F---VLYDS------------------GKPVWASNTGGLG--SGCRLTLHN-NGNLV   64 (110)
T ss_dssp             EEE-ETTTEEEEECTTSC-----E---EEEET------------------TEEEEECCCTTSC--SSCEEEECT-TSCEE
T ss_pred             EEE-ECCCEEEEEcCCCc-----E---EEEEC------------------CEEEEECCCCCCC--CcEEEEEeC-CCCEE
Confidence            467 89999999986653     2   66762                  4899999999773  336899987 99999


Q ss_pred             EEcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeeccCCC
Q 043278           82 ILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFDYPT  135 (752)
Q Consensus        82 l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd~PT  135 (752)
                      |.|.+|.++|.+.+....+...++|+|+|||||++.        .+||||+||.
T Consensus        65 l~~~~~~~~W~S~t~~~~g~~~l~l~~dGnlvl~~~--------~~W~S~~~~~  110 (110)
T 3a0c_A           65 IYDQSNRVIWQTKTNGKEDHYVLVLQQDRNVVIYGP--------VVWATGSGPA  110 (110)
T ss_dssp             EECTTCCEEEECCCCCSSSCCEEEECTTSCEEEECS--------EEEECSCCC-
T ss_pred             EECCCCcEEEecCCCCCCCCEEEEEeCCccEEEECC--------CEecCCCcCC
Confidence            999989999988775444455799999999999741        6999999983


No 262
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=99.56  E-value=9.1e-15  Score=129.28  Aligned_cols=93  Identities=24%  Similarity=0.297  Sum_probs=73.3

Q ss_pred             CCeEEeeeeCCCCCCCCccEEEEecCCCCCCcCccccCCCCCCCCCccEEeccCCCCCCCCCceEEEecCCCcEEEEcCC
Q 043278            7 FGNFKLGFFSPASSTTTERYLGIWHDTAPDTLGWYFRPFLPRYQTDEPIWIANRNTPILDQSGVLTIDSIDGNLKILHNG   86 (752)
Q Consensus         7 ~g~F~lGFf~~~~~~~~~~ylgIw~~~~~~~~~~~~~~~~~~~~~~t~vWvANr~~Pv~~~~~~l~~~~~~g~L~l~~~~   86 (752)
                      +|.|+|+|+..++     ..   +|+.                  .++||+|||+.|.  .+++|.|.. +|||||.|.+
T Consensus        19 ~g~~~L~~~~dgn-----lv---ly~~------------------~~~vW~sn~~~~~--~~~~l~l~~-~GnLvl~d~~   69 (115)
T 2dpf_A           19 AGAYTLTIQNKCN-----LV---KYQN------------------GRQIWASNTDRRG--SGCRLTLLS-DGNLVIYDHN   69 (115)
T ss_dssp             ETTEEEEECTTSC-----EE---EEET------------------TEEEEECSCTTSC--SSCEEEECT-TSCEEEECTT
T ss_pred             CCCEEEEEcCCCc-----EE---EEeC------------------CEEEEeCCCCCCC--CceEEEECC-CCcEEEECCC
Confidence            7999999986642     32   3541                  4899999999883  346899988 9999999988


Q ss_pred             CCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeeccCCCc
Q 043278           87 GNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFDYPTD  136 (752)
Q Consensus        87 g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd~PTD  136 (752)
                      +.++|.+.+....+...++|+|+|||||++       . ++||||.+++.
T Consensus        70 ~~~vW~S~~~~~~g~~~l~l~~dGnlvl~~-------~-~~W~S~~~~~~  111 (115)
T 2dpf_A           70 NNDVWGSACWGDNGKYALVLQKDGRFVIYG-------P-VLWSLGPNGCR  111 (115)
T ss_dssp             CCEEEECCCCCSSSCCEEEECTTSCEEEEC-------S-EEECSSTTCBC
T ss_pred             ceEEEEcCCCCCCCCEEEEEeCCCeEEEEC-------C-CEEECCCCCCc
Confidence            889998776434445579999999999973       1 79999998765


No 263
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=99.56  E-value=6.4e-15  Score=129.00  Aligned_cols=101  Identities=22%  Similarity=0.436  Sum_probs=76.0

Q ss_pred             ccEEeccCCCCCCCCCceEEEecCCCcEEEEcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeecc
Q 043278           53 EPIWIANRNTPILDQSGVLTIDSIDGNLKILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFD  132 (752)
Q Consensus        53 t~vWvANr~~Pv~~~~~~l~~~~~~g~L~l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd  132 (752)
                      ..+|..+.-.  .+...+|.|.. ||||||.+ .++++|++++........++|+|+|||||++.+     +.++|||| 
T Consensus         8 ~~L~~g~~l~--~~~~~~l~~~~-dGnlvl~~-~~~~vW~sn~~~~~~~~~l~l~~dGNLVl~~~~-----~~~~W~S~-   77 (110)
T 3a0c_A            8 NSLFTGHSLE--VGPSYRLIMQG-DCNFVLYD-SGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQS-----NRVIWQTK-   77 (110)
T ss_dssp             CEECTTCEEE--ETTTEEEEECT-TSCEEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEECTT-----CCEEEECC-
T ss_pred             CEECCCCEEE--ECCCEEEEEcC-CCcEEEEE-CCEEEEECCCCCCCCcEEEEEeCCCCEEEECCC-----CcEEEecC-
Confidence            3455544433  13347899987 99999998 578899888754333467999999999999754     46999999 


Q ss_pred             CCCcccCCCCeeccccccCceeEEEEecCCCCCCCCCcEEeeecCCCceeEEEecCceEEEecccc
Q 043278          133 YPTDTLLPGMKLGINLQTGHQWFLQSWLDYSSPAQGSFTLGIEPNATNQLIIRWRRETIYWTSGLL  198 (752)
Q Consensus       133 ~PTDTlLpg~kl~~~~~tg~~~~L~Sw~s~~dps~G~f~l~~~~~g~~~~~~~~~~~~~yw~~g~~  198 (752)
                                                    +++++|.|++.++++|.  ++++. .  +||+++.+
T Consensus        78 ------------------------------t~~~~g~~~l~l~~dGn--lvl~~-~--~~W~S~~~  108 (110)
T 3a0c_A           78 ------------------------------TNGKEDHYVLVLQQDRN--VVIYG-P--VVWATGSG  108 (110)
T ss_dssp             ------------------------------CCCSSSCCEEEECTTSC--EEEEC-S--EEEECSCC
T ss_pred             ------------------------------CCCCCCCEEEEEeCCcc--EEEEC-C--CEecCCCc
Confidence                                          35678999999999995  56644 2  79998764


No 264
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A
Probab=99.52  E-value=1.9e-14  Score=126.65  Aligned_cols=94  Identities=21%  Similarity=0.372  Sum_probs=73.4

Q ss_pred             CCCeEEeeeeCCCCCCCCccEEEEecCCCCCCcCccccCCCCCCCCCccEEeccCCCCCCCCCceEEEecCCCcEEEEcC
Q 043278            6 AFGNFKLGFFSPASSTTTERYLGIWHDTAPDTLGWYFRPFLPRYQTDEPIWIANRNTPILDQSGVLTIDSIDGNLKILHN   85 (752)
Q Consensus         6 ~~g~F~lGFf~~~~~~~~~~ylgIw~~~~~~~~~~~~~~~~~~~~~~t~vWvANr~~Pv~~~~~~l~~~~~~g~L~l~~~   85 (752)
                      ++|.|+|+|+.+++-        +||++                  .++||+||++.+  +.+++|.|.. +|||||.| 
T Consensus        17 ~~~~~~L~~~~dgnl--------vl~~~------------------~~~vW~sn~~~~--~~~~~l~l~~-~GNLvl~d-   66 (112)
T 1xd5_A           17 AEGGYLFIIQNDCNL--------VLYDN------------------NRAVWASGTNGK--ASGCVLKMQN-DGNLVIYS-   66 (112)
T ss_dssp             EETTEEEEECTTSCE--------EEEET------------------TEEEEECCCTTS--CSSEEEEECT-TSCEEEEE-
T ss_pred             eCCCEEEEEcCCCcE--------EEEEC------------------CEEEEeCCCcCC--CCCEEEEEeC-CCCEEEEc-
Confidence            478999999987632        35653                  389999999864  3346899987 99999999 


Q ss_pred             CCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeeccCC
Q 043278           86 GGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFDYP  134 (752)
Q Consensus        86 ~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd~P  134 (752)
                      ++.++|.+.+....+...++|+++|||||++.+     +.++||||+|.
T Consensus        67 ~~~~~W~S~~~~~~g~~~l~l~~dGnlvl~~~~-----~~~~W~S~~~~  110 (112)
T 1xd5_A           67 GSRAIWASNTNRQNGNYYLILQRDRNVVIYDNS-----NNAIWATHTNV  110 (112)
T ss_dssp             TTEEEEECCCCCSCCCCEEEECTTSCEEEECTT-----SCEEEECCCCC
T ss_pred             CCEEEEECCccCCCCCEEEEEeCCCcEEEECCC-----CceEEECCCcc
Confidence            788888877644444557999999999998643     46999999984


No 265
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=99.50  E-value=6.5e-14  Score=124.18  Aligned_cols=86  Identities=26%  Similarity=0.437  Sum_probs=69.4

Q ss_pred             ceEEEecCCCcEEEEcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeeccCCCcccCCCCeecccc
Q 043278           69 GVLTIDSIDGNLKILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFDYPTDTLLPGMKLGINL  148 (752)
Q Consensus        69 ~~l~~~~~~g~L~l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd~PTDTlLpg~kl~~~~  148 (752)
                      .+|.|.. ||||+|.+. +++||++++........++|+|+|||||++.+     ++++||||                 
T Consensus        32 ~~L~~~~-dgnlvly~~-~~~vW~sn~~~~~~~~~l~l~~dGNLVl~d~~-----~~~lW~S~-----------------   87 (119)
T 1b2p_A           32 YRFIMQT-DCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITNE-----NVTVWQSP-----------------   87 (119)
T ss_dssp             EEEEECT-TSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTT-----CCEEEECS-----------------
T ss_pred             EEEEEec-CCCEEEEEC-CEEEEeCCCccCCCceEEEEccCCEEEEEeCC-----CcEEEcCC-----------------
Confidence            4688887 999999986 78889888754333467999999999999754     56999999                 


Q ss_pred             ccCceeEEEEecCCCCCCCCCcEEeeecCCCceeEEEecCceEEEeccc
Q 043278          149 QTGHQWFLQSWLDYSSPAQGSFTLGIEPNATNQLIIRWRRETIYWTSGL  197 (752)
Q Consensus       149 ~tg~~~~L~Sw~s~~dps~G~f~l~~~~~g~~~~~~~~~~~~~yw~~g~  197 (752)
                                    +||++|.|++.++++|.  ++++.   .+||++|+
T Consensus        88 --------------~~~~~g~~~l~l~~~Gn--lvl~~---~~~W~Sg~  117 (119)
T 1b2p_A           88 --------------VAGKAGHYVLVLQPDRN--VVIYG---DALWATQT  117 (119)
T ss_dssp             --------------CCCCSSCEEEEECTTSC--EEEEE---SEEEECCC
T ss_pred             --------------CCCCCCCEEEEEECCCc--EEEEC---ccEeCCCC
Confidence                          45678999999999996  56644   38999875


No 266
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*
Probab=99.46  E-value=1.8e-13  Score=120.86  Aligned_cols=92  Identities=24%  Similarity=0.378  Sum_probs=72.9

Q ss_pred             CceEEEecCCCcEEEEcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeeccCCCcccCCCCeeccc
Q 043278           68 SGVLTIDSIDGNLKILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFDYPTDTLLPGMKLGIN  147 (752)
Q Consensus        68 ~~~l~~~~~~g~L~l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd~PTDTlLpg~kl~~~  147 (752)
                      ...|.|.. ||||+|.+ .++++|++++........++|+++|||||++.+     +.++|||||+              
T Consensus        21 ~~~L~~~~-dgnlvly~-~~~~vW~sn~~~~~~~~~l~l~~~GnLvl~d~~-----~~~vW~S~~~--------------   79 (115)
T 2dpf_A           21 AYTLTIQN-KCNLVKYQ-NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHN-----NNDVWGSACW--------------   79 (115)
T ss_dssp             TEEEEECT-TSCEEEEE-TTEEEEECSCTTSCSSCEEEECTTSCEEEECTT-----CCEEEECCCC--------------
T ss_pred             CEEEEEcC-CCcEEEEe-CCEEEEeCCCCCCCCceEEEECCCCcEEEECCC-----ceEEEEcCCC--------------
Confidence            46899987 99999997 577889887644333467999999999999753     4699999997              


Q ss_pred             cccCceeEEEEecCCCCCCCCCcEEeeecCCCceeEEEecCceEEEecccccCCc
Q 043278          148 LQTGHQWFLQSWLDYSSPAQGSFTLGIEPNATNQLIIRWRRETIYWTSGLLLNGN  202 (752)
Q Consensus       148 ~~tg~~~~L~Sw~s~~dps~G~f~l~~~~~g~~~~~~~~~~~~~yw~~g~~~~~~  202 (752)
                                       +++|.|++.++++|.  ++++. .  +||++++|....
T Consensus        80 -----------------~~~g~~~l~l~~dGn--lvl~~-~--~~W~S~~~~~~~  112 (115)
T 2dpf_A           80 -----------------GDNGKYALVLQKDGR--FVIYG-P--VLWSLGPNGCRR  112 (115)
T ss_dssp             -----------------CSSSCCEEEECTTSC--EEEEC-S--EEECSSTTCBCC
T ss_pred             -----------------CCCCCEEEEEeCCCe--EEEEC-C--CEEECCCCCCcC
Confidence                             356889999999995  56643 2  899999997653


No 267
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=99.41  E-value=5.4e-13  Score=116.55  Aligned_cols=87  Identities=29%  Similarity=0.463  Sum_probs=68.0

Q ss_pred             CCeEEeeeeCCCCCCCCccEEEEecCCCCCCcCccccCCCCCCCCCccEEeccCCCCCCCCCceEEEecCCCcEEEEcCC
Q 043278            7 FGNFKLGFFSPASSTTTERYLGIWHDTAPDTLGWYFRPFLPRYQTDEPIWIANRNTPILDQSGVLTIDSIDGNLKILHNG   86 (752)
Q Consensus         7 ~g~F~lGFf~~~~~~~~~~ylgIw~~~~~~~~~~~~~~~~~~~~~~t~vWvANr~~Pv~~~~~~l~~~~~~g~L~l~~~~   86 (752)
                      +|.|+|+|+..+     +.+|   |+.                  .++||+||++.+  +..+.|.|.. ||||||.|.+
T Consensus        18 ~g~~~L~~q~dG-----nLvl---y~~------------------~~~vW~snt~~~--~~~~~l~l~~-dGNLvl~~~~   68 (109)
T 3dzw_A           18 NGRYVFIMQEDC-----NLVL---YDV------------------DKPIWATNTGGL--DRRCHLSMQS-DGNLVVYSPR   68 (109)
T ss_dssp             ETTEEEEECTTS-----CEEE---EET------------------TEEEEECCCTTS--SSSCEEEECT-TSCEEEECTT
T ss_pred             CCCEEEEEcCCC-----cEEE---EeC------------------CEEEEECCcccC--CCCEEEEEeC-CCCEEEECCC
Confidence            799999998665     2333   542                  388999999976  3346899987 9999999988


Q ss_pred             CCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeee
Q 043278           87 GNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQS  130 (752)
Q Consensus        87 g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQS  130 (752)
                      +.++|.+++........|+|+|+|||||++.        .+|||
T Consensus        69 ~~~~W~S~t~~~~~~~~~~L~ddGNlvly~~--------~~W~s  104 (109)
T 3dzw_A           69 NNPIWASNTGGENGNYVCVLQKDRNVVIYGT--------ARWAT  104 (109)
T ss_dssp             SCEEEECCCCCSSSCEEEEECTTSCEEEEES--------CCCCC
T ss_pred             CCEEEECCCCCCCCCEEEEEeCCCEEEEECC--------CEEeC
Confidence            8899988764433345799999999999852        68998


No 268
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.25  E-value=1.7e-11  Score=125.64  Aligned_cols=146  Identities=16%  Similarity=0.092  Sum_probs=113.9

Q ss_pred             HHhcCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcC-CCCcceeeeeeeeCCeeEEEE
Q 043278          427 AAANNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQ-HTNLVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       427 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~  505 (752)
                      ..-..|.....++.|+.+.||+.... ++.+++|+...........+.+|+.+++.+. +..+.++++++.+.+..++||
T Consensus        11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~   89 (263)
T 3tm0_A           11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM   89 (263)
T ss_dssp             HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred             HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence            34457877788888999999999854 6789999986532222345789999999884 677888999998888999999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYS------------------------------------  549 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------  549 (752)
                      ||+++.+|...+.        +......++.+++++|..||+..                                    
T Consensus        90 e~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (263)
T 3tm0_A           90 SEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED  161 (263)
T ss_dssp             ECCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred             EecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence            9999999876531        11223478889999999999821                                    


Q ss_pred             --------------------CCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          550 --------------------RLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       550 --------------------~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                                          ...++|+|++|.|||++++..+.|+||+.+..
T Consensus       162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                                14589999999999998766667999998764


No 269
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=99.20  E-value=6.3e-11  Score=103.37  Aligned_cols=67  Identities=16%  Similarity=0.206  Sum_probs=53.7

Q ss_pred             ccEEeccCCCCCCCCCceEEEecCCCcEEEEcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeee
Q 043278           53 EPIWIANRNTPILDQSGVLTIDSIDGNLKILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQS  130 (752)
Q Consensus        53 t~vWvANr~~Pv~~~~~~l~~~~~~g~L~l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQS  130 (752)
                      ++||.+|++..  +....|.|.. ||||||.|.+|.++|.+++........|+|+|+|||||++        ..+|+|
T Consensus        42 ~~vW~snt~~~--~~~~~l~l~~-dGNLvl~d~~~~~iW~S~t~~~~~~~~~~L~~dGNlvly~--------~~~W~t  108 (110)
T 3r0e_B           42 KYGWQSNTHGN--GEHCFLRLNH-KGELIIKDDDFKTIWSSRSSSKQGEYVLILQDDGFGVIYG--------PAIFET  108 (110)
T ss_dssp             SSCEECCCTTS--SSSCEEEECT-TSCEEEECTTCCEEEECCCCCSSSCCEEEECTTSCEEEEC--------SEEEES
T ss_pred             eEEEECCCcCC--CcCEEEEEeC-CCcEEEEeCCCCEEEEcCCcCCCCCEEEEEcCCccEEEec--------CCEecC
Confidence            47999999863  3336899987 9999999998999998876443344679999999999985        268987


No 270
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=99.18  E-value=8.4e-11  Score=103.17  Aligned_cols=68  Identities=19%  Similarity=0.333  Sum_probs=55.3

Q ss_pred             CccEEeccCCCCCCCCCceEEEecCCCcEEEEcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeee
Q 043278           52 DEPIWIANRNTPILDQSGVLTIDSIDGNLKILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQS  130 (752)
Q Consensus        52 ~t~vWvANr~~Pv~~~~~~l~~~~~~g~L~l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQS  130 (752)
                      .++||.+|+..+-  ....|.|.. ||||||.|.++.++|.+++....+...|+|+|+|||||++        ..+|+|
T Consensus        44 ~~~vWssnt~~~~--~~~~l~l~~-dGNLVl~d~~~~~iW~S~t~~~~~~~~~~L~~dGnlvly~--------~~~W~s  111 (113)
T 3mez_B           44 TNIVWESGTSGRG--QHCFMRLGH-SGELDITDDRLNTVFVSNTVGQEGDYVLILQINGQAVVYG--------PAVWST  111 (113)
T ss_dssp             TEEEEECCCTTSC--SSCEEEECT-TSCEEEECTTSCEEEECSCCCSSSCCEEEECTTSCEEEEC--------SEEEES
T ss_pred             CEEEEECCcccCC--cCEEEEEeC-CCcEEEECCCCCEEEECCCcCCCCCEEEEEcCCceEEEec--------CCEecC
Confidence            4899999998762  336899987 9999999998888988876443344679999999999984        379997


No 271
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=99.11  E-value=2.1e-10  Score=100.57  Aligned_cols=96  Identities=19%  Similarity=0.271  Sum_probs=71.0

Q ss_pred             CCCCCCCCCceEEEecCCCcEEEEcC-CCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeeccCCCccc
Q 043278           60 RNTPILDQSGVLTIDSIDGNLKILHN-GGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFDYPTDTL  138 (752)
Q Consensus        60 r~~Pv~~~~~~l~~~~~~g~L~l~~~-~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd~PTDTl  138 (752)
                      .+.|+.+...+|.+.. ||||||.+. .+.++|++++........++|+++|||||++.+     +.++|||=.+     
T Consensus        17 ~g~~L~~g~~~L~~q~-dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~-----~~~iW~S~t~-----   85 (113)
T 3mez_B           17 DNAQLATRDYSLVMRD-DCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDR-----LNTVFVSNTV-----   85 (113)
T ss_dssp             TTCEEEETTEEEEECT-TSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTT-----SCEEEECSCC-----
T ss_pred             CCCEeEcCCEEEEEcC-CCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCC-----CCEEEECCCc-----
Confidence            4677777778999987 999999987 478899887753333457999999999999754     4589997321     


Q ss_pred             CCCCeeccccccCceeEEEEecCCCCCCCCCcEEeeecCCCceeEEEecCceEEEeccc
Q 043278          139 LPGMKLGINLQTGHQWFLQSWLDYSSPAQGSFTLGIEPNATNQLIIRWRRETIYWTSGL  197 (752)
Q Consensus       139 Lpg~kl~~~~~tg~~~~L~Sw~s~~dps~G~f~l~~~~~g~~~~~~~~~~~~~yw~~g~  197 (752)
                        +                        ..|.|.+.++++|.  ++++.   .+.|.+|+
T Consensus        86 --~------------------------~~~~~~~~L~~dGn--lvly~---~~~W~s~~  113 (113)
T 3mez_B           86 --G------------------------QEGDYVLILQINGQ--AVVYG---PAVWSTAA  113 (113)
T ss_dssp             --C------------------------SSSCCEEEECTTSC--EEEEC---SEEEESCC
T ss_pred             --C------------------------CCCCEEEEEcCCce--EEEec---CCEecCCC
Confidence              0                        12458999999994  44533   57898764


No 272
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=99.08  E-value=3.2e-10  Score=98.99  Aligned_cols=96  Identities=16%  Similarity=0.320  Sum_probs=68.7

Q ss_pred             CCCCCCCCceEEEecCCCcEEEEcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeeccCCCcccCC
Q 043278           61 NTPILDQSGVLTIDSIDGNLKILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFDYPTDTLLP  140 (752)
Q Consensus        61 ~~Pv~~~~~~l~~~~~~g~L~l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd~PTDTlLp  140 (752)
                      +.++.....+|.+.. ||||||.+.++  +|++++........++|+++|||||++.++    +.++|||.-+       
T Consensus        14 g~~L~~g~~~L~~q~-dGnLvl~~~~~--vW~snt~~~~~~~~l~l~~dGNLVl~~~~~----~~~vW~S~t~-------   79 (111)
T 3mez_A           14 DNQLSYESAAFVMQG-DCNLVLYNEAG--GFQSNTHGRGVDCTLRLNNRGQLEIHSANS----NTPVWVYPRS-------   79 (111)
T ss_dssp             TCEEEETTEEEEECT-TSCEEEECSSC--CEECCCTTSCSSCEEEECTTSCEEEECSSC----SSCSEEESSS-------
T ss_pred             CCEEecCCEEEEEcc-CCeEEEECCCC--EEECCcccCCcCEEEEEcCCCcEEEEeCCC----CEEEEEeccc-------
Confidence            445555557899987 99999998776  898876433334679999999999997641    2359999721       


Q ss_pred             CCeeccccccCceeEEEEecCCCCCCCCCcEEeeecCCCceeEEEecCceEEEeccc
Q 043278          141 GMKLGINLQTGHQWFLQSWLDYSSPAQGSFTLGIEPNATNQLIIRWRRETIYWTSGL  197 (752)
Q Consensus       141 g~kl~~~~~tg~~~~L~Sw~s~~dps~G~f~l~~~~~g~~~~~~~~~~~~~yw~~g~  197 (752)
                                            .....|.|.+.++++|.  ++++.   .++|.++.
T Consensus        80 ----------------------~~~~~~~~~l~Lq~dGN--lvly~---~~~W~s~t  109 (111)
T 3mez_A           80 ----------------------VNTVRGNYAATLGPDQH--VTIYG---PAIWSTPA  109 (111)
T ss_dssp             ----------------------CCCCSSCCEEEECTTSC--EEEEC---SEEEECCC
T ss_pred             ----------------------cCCCCcCEEEEECCCCe--EEEec---cCEEccCC
Confidence                                  01134789999999994  45543   67898763


No 273
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.07  E-value=1.6e-10  Score=118.02  Aligned_cols=129  Identities=16%  Similarity=0.161  Sum_probs=98.4

Q ss_pred             ecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCC--cceeeeeeeeCCeeEEEEeeCCCCCHhHH
Q 043278          439 GEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTN--LVRLLGCSLHGEERLLVYEFMPNKSLDFF  516 (752)
Q Consensus       439 G~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~E~~~~gsL~~~  516 (752)
                      +.|..+.||+....+|+.+++|.....   ....+.+|+.+++.+.+.+  +.+++++...++..++||||+++.+|.  
T Consensus        29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--  103 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--  103 (264)
T ss_dssp             CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred             cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence            456669999998877888999997654   2235678999999886544  556888888777889999999998884  


Q ss_pred             HhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------
Q 043278          517 LFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYS-----------------------------------------------  549 (752)
Q Consensus       517 l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----------------------------------------------  549 (752)
                      . ..     ..   ...++.++++.|..||+..                                               
T Consensus       104 ~-~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  174 (264)
T 1nd4_A          104 S-SH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARL  174 (264)
T ss_dssp             T-SC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHH
T ss_pred             c-Cc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHH
Confidence            2 11     11   2357778888888888743                                               


Q ss_pred             --------CCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          550 --------RLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       550 --------~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                              +..++|+|++|.|||++++..+.|+||+.+..
T Consensus       175 ~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          175 KARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             HHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                    12399999999999998876677999999864


No 274
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=99.03  E-value=6.8e-10  Score=96.58  Aligned_cols=71  Identities=23%  Similarity=0.356  Sum_probs=55.3

Q ss_pred             EEeccCCCCCCCCCceEEEecCCCcEEEEcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeeccCC
Q 043278           55 IWIANRNTPILDQSGVLTIDSIDGNLKILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFDYP  134 (752)
Q Consensus        55 vWvANr~~Pv~~~~~~l~~~~~~g~L~l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd~P  134 (752)
                      +|.+|+..+  .....|.|.. ||||||.|.++.++|.+++........|+|+|+|||||++        ..+|+|    
T Consensus        39 ~Wssnt~~~--~~~~~l~l~~-dGnLvl~d~~~~~vWss~t~~~~~~~~~~L~~dGNlvly~--------~~~W~s----  103 (109)
T 3r0e_A           39 NWQSNTANN--GRDCKLTLTD-YGELVIKNGDGSTVWKSGAQSVKGNYAAVVHPDGRLVVFG--------PSVFKI----  103 (109)
T ss_dssp             TEECCCTTS--CSSCEEEECT-TSCEEEECTTSCEEEECCCCCSSSCCEEEEETTTEEEEEC--------SEEEEE----
T ss_pred             eEEcCCCCC--CCcEEEEEcC-CCeEEEEeCCCCEEEcCCCcCCCcCEEEEEcCCCeEEEEe--------cCEECC----
Confidence            699998865  2346899988 9999999998889997766443334579999999999984        379998    


Q ss_pred             CcccCCC
Q 043278          135 TDTLLPG  141 (752)
Q Consensus       135 TDTlLpg  141 (752)
                       +|.+||
T Consensus       104 -~t~~~~  109 (109)
T 3r0e_A          104 -DPWVRG  109 (109)
T ss_dssp             -CTTSCC
T ss_pred             -CCccCC
Confidence             555554


No 275
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.93  E-value=3.7e-09  Score=113.51  Aligned_cols=142  Identities=13%  Similarity=0.216  Sum_probs=107.1

Q ss_pred             cCCeeecCCcccEEEEEecCCceeEEEEcc--cCC-cccHHHHHHHHHHHHhcC--CCCcceeeeeeeeC---CeeEEEE
Q 043278          434 TTNKLGEGGFGPVYKGKLADEQEVAIKRLS--RSS-GQGIVEFKNEVRLIAKLQ--HTNLVRLLGCSLHG---EERLLVY  505 (752)
Q Consensus       434 ~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~  505 (752)
                      ..+.|+.|.++.||+....+ ..+++|+..  ... ......+.+|+.+++.+.  +..+.+++.++.+.   ...++||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            34689999999999998754 578888876  322 123346788999999997  45678888888776   3479999


Q ss_pred             eeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 043278          506 EFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYS------------------------------------  549 (752)
Q Consensus       506 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------  549 (752)
                      ||+++..+.+..     ...++..++..++.++++.|+.||...                                    
T Consensus       121 e~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (359)
T 3dxp_A          121 EFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP  195 (359)
T ss_dssp             ECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred             EecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence            999998774321     123678888999999999999999731                                    


Q ss_pred             -------------------CCcEeecCCCCCcEEecCCCC--ceeccccccee
Q 043278          550 -------------------RLRVIHRDLKASNILLDDKMN--PKISDFGMARI  581 (752)
Q Consensus       550 -------------------~~~iiH~Dikp~NIll~~~~~--~kl~DFgla~~  581 (752)
                                         ...++|+|++|.|||++.++.  +.|+||+.+..
T Consensus       196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                               256999999999999987753  68999999875


No 276
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=98.89  E-value=5.4e-09  Score=91.05  Aligned_cols=91  Identities=18%  Similarity=0.269  Sum_probs=64.8

Q ss_pred             CCCCCCCceEEEecCCCcEEEEcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeeccCCCcccCCC
Q 043278           62 TPILDQSGVLTIDSIDGNLKILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFDYPTDTLLPG  141 (752)
Q Consensus        62 ~Pv~~~~~~l~~~~~~g~L~l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd~PTDTlLpg  141 (752)
                      .++.....+|.+.. ||||||.+.  .++|++++........++|+|+|||||++.+     +.++|||-.+-       
T Consensus        19 ~~L~sg~~~L~~q~-dGnLvl~~~--~~vW~snt~~~~~~~~l~l~~dGNLvl~d~~-----~~~iW~S~t~~-------   83 (110)
T 3r0e_B           19 GRLTAKNHQLVMQG-DCNLVLYGG--KYGWQSNTHGNGEHCFLRLNHKGELIIKDDD-----FKTIWSSRSSS-------   83 (110)
T ss_dssp             EEEECSSCEEEECT-TSCEEEECS--SSCEECCCTTSSSSCEEEECTTSCEEEECTT-----CCEEEECCCCC-------
T ss_pred             CEEEeCCEEEEEcC-CCeEEEECC--eEEEECCCcCCCcCEEEEEeCCCcEEEEeCC-----CCEEEEcCCcC-------
Confidence            34444457899987 999999875  5889887654333357999999999999754     46899985210       


Q ss_pred             CeeccccccCceeEEEEecCCCCCCCCCcEEeeecCCCceeEEEecCceEEEecc
Q 043278          142 MKLGINLQTGHQWFLQSWLDYSSPAQGSFTLGIEPNATNQLIIRWRRETIYWTSG  196 (752)
Q Consensus       142 ~kl~~~~~tg~~~~L~Sw~s~~dps~G~f~l~~~~~g~~~~~~~~~~~~~yw~~g  196 (752)
                                              ..|.|.+.++++|.  ++++.   .+.|.+|
T Consensus        84 ------------------------~~~~~~~~L~~dGN--lvly~---~~~W~t~  109 (110)
T 3r0e_B           84 ------------------------KQGEYVLILQDDGF--GVIYG---PAIFETS  109 (110)
T ss_dssp             ------------------------SSSCCEEEECTTSC--EEEEC---SEEEESC
T ss_pred             ------------------------CCCCEEEEEcCCcc--EEEec---CCEecCC
Confidence                                    12458899999994  44433   3678876


No 277
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.84  E-value=3.8e-09  Score=110.56  Aligned_cols=186  Identities=20%  Similarity=0.245  Sum_probs=122.6

Q ss_pred             CCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcC-CCC--cceeeeeeeeCC---eeEEEEeeC
Q 043278          435 TNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQ-HTN--LVRLLGCSLHGE---ERLLVYEFM  508 (752)
Q Consensus       435 ~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~E~~  508 (752)
                      .+.++.|....||+..    ..+++|+....  .....+.+|.+++..+. +..  +.+++.....++   ..++|||++
T Consensus        25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            3578999999999753    56888886432  34567889999998883 332  344555443333   347899999


Q ss_pred             CCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 043278          509 PNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYS---------------------------------------  549 (752)
Q Consensus       509 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------------  549 (752)
                      ++..|.....     ..++..++..++.++++.|+.||+..                                       
T Consensus        99 ~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  173 (304)
T 3sg8_A           99 KGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV  173 (304)
T ss_dssp             CCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred             CCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence            9998865442     23677888889999999999999611                                       


Q ss_pred             ----------------CCcEeecCCCCCcEEecC--CCCceecccccceeecccccccccc------------cccccCC
Q 043278          550 ----------------RLRVIHRDLKASNILLDD--KMNPKISDFGMARIFEVNESEANTK------------RIVGTYG  599 (752)
Q Consensus       550 ----------------~~~iiH~Dikp~NIll~~--~~~~kl~DFgla~~~~~~~~~~~~~------------~~~gt~~  599 (752)
                                      .+.++|+|++|.||++++  ...+.|+||+.+..-..........            ......+
T Consensus       174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~  253 (304)
T 3sg8_A          174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK  253 (304)
T ss_dssp             HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence                            235899999999999998  5567899999987532211000000            0000111


Q ss_pred             ccC-hhhhccCCCCccchhHHHHHHHHHHHhCCCC
Q 043278          600 YMS-PEYAMSGIVSIKTDVFSFGVLVLEIVSGQKN  633 (752)
Q Consensus       600 y~a-PE~~~~~~~t~k~DV~S~G~vl~elltG~~p  633 (752)
                      ... |+.....  ....+.|+++.+++++.+|..+
T Consensus       254 ~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~  286 (304)
T 3sg8_A          254 HKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMD  286 (304)
T ss_dssp             CSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHH
T ss_pred             CCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHH
Confidence            122 2222111  1236899999999999999754


No 278
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=98.83  E-value=8.3e-09  Score=89.83  Aligned_cols=86  Identities=21%  Similarity=0.381  Sum_probs=62.0

Q ss_pred             CceEEEecCCCcEEEEcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeeccCCCcccCCCCeeccc
Q 043278           68 SGVLTIDSIDGNLKILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFDYPTDTLLPGMKLGIN  147 (752)
Q Consensus        68 ~~~l~~~~~~g~L~l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd~PTDTlLpg~kl~~~  147 (752)
                      ..+|.+.. ||||||.+. +.++|++++........++|+++|||||++.+     +.++|||....             
T Consensus        20 ~~~L~~q~-dGnLvly~~-~~~vW~snt~~~~~~~~l~l~~dGNLvl~~~~-----~~~~W~S~t~~-------------   79 (109)
T 3dzw_A           20 RYVFIMQE-DCNLVLYDV-DKPIWATNTGGLDRRCHLSMQSDGNLVVYSPR-----NNPIWASNTGG-------------   79 (109)
T ss_dssp             TEEEEECT-TSCEEEEET-TEEEEECCCTTSSSSCEEEECTTSCEEEECTT-----SCEEEECCCCC-------------
T ss_pred             CEEEEEcC-CCcEEEEeC-CEEEEECCcccCCCCEEEEEeCCCCEEEECCC-----CCEEEECCCCC-------------
Confidence            36799987 999999986 67889887644333457899999999999754     46899986311             


Q ss_pred             cccCceeEEEEecCCCCCCCCCcEEeeecCCCceeEEEecCceEEEecc
Q 043278          148 LQTGHQWFLQSWLDYSSPAQGSFTLGIEPNATNQLIIRWRRETIYWTSG  196 (752)
Q Consensus       148 ~~tg~~~~L~Sw~s~~dps~G~f~l~~~~~g~~~~~~~~~~~~~yw~~g  196 (752)
                                        ..+.|.+.++++|.  ++++.   .+.|.+|
T Consensus        80 ------------------~~~~~~~~L~ddGN--lvly~---~~~W~s~  105 (109)
T 3dzw_A           80 ------------------ENGNYVCVLQKDRN--VVIYG---TARWATG  105 (109)
T ss_dssp             ------------------SSSCEEEEECTTSC--EEEEE---SCCCCCC
T ss_pred             ------------------CCCCEEEEEeCCCE--EEEEC---CCEEeCC
Confidence                              12467899999984  44433   2567665


No 279
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=98.82  E-value=1.1e-08  Score=88.87  Aligned_cols=95  Identities=17%  Similarity=0.284  Sum_probs=67.8

Q ss_pred             cCCCCCCCCCceEEEecCCCcEEEEcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeeccCCCccc
Q 043278           59 NRNTPILDQSGVLTIDSIDGNLKILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFDYPTDTL  138 (752)
Q Consensus        59 Nr~~Pv~~~~~~l~~~~~~g~L~l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd~PTDTl  138 (752)
                      ..+.|+.+....|.+.. ||||||.++    +|++++........++|.++|||||++.+     +.++|+|-     | 
T Consensus        13 ~~g~~L~~g~~~L~~q~-dGNLvl~~~----~Wssnt~~~~~~~~l~l~~dGnLvl~d~~-----~~~vWss~-----t-   76 (109)
T 3r0e_A           13 DTEGHLKNGDFDLVMQD-DCNLVLYNG----NWQSNTANNGRDCKLTLTDYGELVIKNGD-----GSTVWKSG-----A-   76 (109)
T ss_dssp             CTTCEEEETTEEEEECT-TSCEEEETT----TEECCCTTSCSSCEEEECTTSCEEEECTT-----SCEEEECC-----C-
T ss_pred             CCCCEeECCCEEEEEec-CCeEEEEeC----eEEcCCCCCCCcEEEEEcCCCeEEEEeCC-----CCEEEcCC-----C-
Confidence            34556666667899987 999999973    68887654333457899999999998754     46899752     1 


Q ss_pred             CCCCeeccccccCceeEEEEecCCCCCCCCCcEEeeecCCCceeEEEecCceEEEeccccc
Q 043278          139 LPGMKLGINLQTGHQWFLQSWLDYSSPAQGSFTLGIEPNATNQLIIRWRRETIYWTSGLLL  199 (752)
Q Consensus       139 Lpg~kl~~~~~tg~~~~L~Sw~s~~dps~G~f~l~~~~~g~~~~~~~~~~~~~yw~~g~~~  199 (752)
                                               ....+.|.+.++++|  .++++.   .+.|.+++|-
T Consensus        77 -------------------------~~~~~~~~~~L~~dG--Nlvly~---~~~W~s~t~~  107 (109)
T 3r0e_A           77 -------------------------QSVKGNYAAVVHPDG--RLVVFG---PSVFKIDPWV  107 (109)
T ss_dssp             -------------------------CCSSSCCEEEEETTT--EEEEEC---SEEEEECTTS
T ss_pred             -------------------------cCCCcCEEEEEcCCC--eEEEEe---cCEECCCCcc
Confidence                                     002356899999999  455533   5789998764


No 280
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*
Probab=98.78  E-value=1.6e-08  Score=103.36  Aligned_cols=69  Identities=19%  Similarity=0.362  Sum_probs=57.1

Q ss_pred             ccEEeccCCCCCCCCCceEEEecCCCcEEEEcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeecc
Q 043278           53 EPIWIANRNTPILDQSGVLTIDSIDGNLKILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFD  132 (752)
Q Consensus        53 t~vWvANr~~Pv~~~~~~l~~~~~~g~L~l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd  132 (752)
                      +++|.+++.++-  . ..|.+.. +|+|++.|.++..+|.+.+.. .....|+|+++|||||++.       +.+|||||
T Consensus       184 ~~yW~Sgt~~~~--~-~~l~l~~-dGnLvl~d~~~~~vWsS~t~~-~~~~rl~Ld~dGnLvly~~-------~~~Wqsf~  251 (276)
T 3m7h_A          184 AATWNAGTQGKG--A-VRAVFQG-DGNLVVYGAGNAVLWHSHTGG-HASAVLRLQANGSIAILDE-------KPVWARFG  251 (276)
T ss_dssp             SEEEECCCTTTT--C-CEEEECT-TSCEEEECTTSCEEEECSCTT-CTTCEEEECTTSCEEEEEE-------EEEEESSS
T ss_pred             eEEEECCCCCCc--c-EEEEEcC-CCeEEEEeCCCcEEEEecCCC-CCCEEEEEcCCccEEEEcC-------CCeEEccC
Confidence            789999998862  2 6789987 999999998888888877643 3346899999999999864       37999999


Q ss_pred             C
Q 043278          133 Y  133 (752)
Q Consensus       133 ~  133 (752)
                      |
T Consensus       252 ~  252 (276)
T 3m7h_A          252 F  252 (276)
T ss_dssp             C
T ss_pred             c
Confidence            7


No 281
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=98.78  E-value=2e-08  Score=87.63  Aligned_cols=65  Identities=20%  Similarity=0.278  Sum_probs=50.7

Q ss_pred             EEeccCCCCCCCCCceEEEecCCCcEEEEcCCCC-cEEEeeccC--CccccceeEecCCCeEEEEecCCCccceeEeee
Q 043278           55 IWIANRNTPILDQSGVLTIDSIDGNLKILHNGGN-PIAVSSVEG--ASNNTSATLLQSGNLVLREMDTDGTIKRVLWQS  130 (752)
Q Consensus        55 vWvANr~~Pv~~~~~~l~~~~~~g~L~l~~~~g~-~~~~~~~~~--~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQS  130 (752)
                      ||.+|+..+-  ....|.+.. ||||||.|.++. ++|.+++..  ......++|+|+|||||++        ..+|+|
T Consensus        40 vW~snt~~~~--~~~~l~l~~-dGNLVl~~~~~~~~vW~S~t~~~~~~~~~~l~Lq~dGNlvly~--------~~~W~s  107 (111)
T 3mez_A           40 GFQSNTHGRG--VDCTLRLNN-RGQLEIHSANSNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYG--------PAIWST  107 (111)
T ss_dssp             CEECCCTTSC--SSCEEEECT-TSCEEEECSSCSSCSEEESSSCCCCSSCCEEEECTTSCEEEEC--------SEEEEC
T ss_pred             EEECCcccCC--cCEEEEEcC-CCcEEEEeCCCCEEEEEeccccCCCCcCEEEEECCCCeEEEec--------cCEEcc
Confidence            9999998762  235899987 999999998876 489877532  2234579999999999984        378987


No 282
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.54  E-value=5.8e-07  Score=94.58  Aligned_cols=137  Identities=15%  Similarity=0.206  Sum_probs=103.3

Q ss_pred             CCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCC----CCcceeeeeeeeCCeeEEEEe
Q 043278          431 NFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQH----TNLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       431 ~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lv~E  506 (752)
                      .....+.++.|....||+.    ++.+++|+....  .....+.+|..++..+.+    ..+.+++++    +..++|||
T Consensus        38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme  107 (320)
T 3r70_A           38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK  107 (320)
T ss_dssp             CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred             ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence            5566678999999999987    677888876432  223568899999988866    123445544    46789999


Q ss_pred             eCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC------------------------------------
Q 043278          507 FMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSR------------------------------------  550 (752)
Q Consensus       507 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~------------------------------------  550 (752)
                      |+++.++.....     ..++..++..++.++++.|+.||+...                                    
T Consensus       108 ~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (320)
T 3r70_A          108 YIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLT  182 (320)
T ss_dssp             CCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             ecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccc
Confidence            999999864432     136777778888888888888885332                                    


Q ss_pred             ------------------------CcEeecCCCCCcEEecCCCCceecccccceee
Q 043278          551 ------------------------LRVIHRDLKASNILLDDKMNPKISDFGMARIF  582 (752)
Q Consensus       551 ------------------------~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~  582 (752)
                                              +.++|+|++|.|||++.+..+.|+||+.+..-
T Consensus       183 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~  238 (320)
T 3r70_A          183 DEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG  238 (320)
T ss_dssp             HHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred             ccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence                                    24699999999999998666799999998753


No 283
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.43  E-value=1.1e-06  Score=90.83  Aligned_cols=141  Identities=19%  Similarity=0.212  Sum_probs=94.0

Q ss_pred             cCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCC---CcceeeeeeeeCCeeEEEEeeCCC
Q 043278          434 TTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHT---NLVRLLGCSLHGEERLLVYEFMPN  510 (752)
Q Consensus       434 ~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~E~~~~  510 (752)
                      ..+.|+.|.++.||++...+|+.++||+...........|..|++.|+.+++.   .+.+++++.    ..++||||+++
T Consensus        19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g   94 (288)
T 3d1u_A           19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE   94 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred             ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence            35789999999999999989999999997544333446789999999999875   577777763    46899999999


Q ss_pred             CCHhH--------H---HhhcCCC-------C-----------CCCHHHHHH--------------------HHHHHHHH
Q 043278          511 KSLDF--------F---LFNSGRK-------N-----------VLNWEKRFI--------------------IIEGISQG  541 (752)
Q Consensus       511 gsL~~--------~---l~~~~~~-------~-----------~l~~~~~~~--------------------i~~~i~~~  541 (752)
                      +.+..        .   ++.....       .           .-+|...+.                    ....+-+.
T Consensus        95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l  174 (288)
T 3d1u_A           95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV  174 (288)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence            87532        1   2221110       0           013432211                    01111122


Q ss_pred             HHHHH----hcCCCcEeecCCCCCcEEecCCCCceecccccce
Q 043278          542 LLYLH----KYSRLRVIHRDLKASNILLDDKMNPKISDFGMAR  580 (752)
Q Consensus       542 l~~LH----~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~  580 (752)
                      ++.|.    ....+.++|+|+.+.|||++.+ .+.|+|| .+.
T Consensus       175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~  215 (288)
T 3d1u_A          175 LDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH  215 (288)
T ss_dssp             HHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred             HHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence            22232    2234679999999999999884 5889999 654


No 284
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.36  E-value=3.7e-06  Score=87.73  Aligned_cols=135  Identities=21%  Similarity=0.189  Sum_probs=97.0

Q ss_pred             CeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCC---Ccceeeeeee-eCCeeEEEEeeCCCC
Q 043278          436 NKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHT---NLVRLLGCSL-HGEERLLVYEFMPNK  511 (752)
Q Consensus       436 ~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~E~~~~g  511 (752)
                      +.++.|....||+.    +..+++|+-..  ......+.+|..+|..+.+.   .+.+++.++. ..+..++|||++++.
T Consensus        25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~   98 (306)
T 3tdw_A           25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ   98 (306)
T ss_dssp             EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred             eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence            56888888899987    56788887432  23346788999999999653   3556666664 345678999999999


Q ss_pred             CHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------------
Q 043278          512 SLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKY-------------------------------------------  548 (752)
Q Consensus       512 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-------------------------------------------  548 (752)
                      .+......     .++..++..++.++++.|+.||+.                                           
T Consensus        99 ~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~  173 (306)
T 3tdw_A           99 ILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT  173 (306)
T ss_dssp             ECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred             ECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence            88764321     245556666666777776666653                                           


Q ss_pred             --------------CCCcEeecCCCCCcEEecC---CCCc-eeccccccee
Q 043278          549 --------------SRLRVIHRDLKASNILLDD---KMNP-KISDFGMARI  581 (752)
Q Consensus       549 --------------~~~~iiH~Dikp~NIll~~---~~~~-kl~DFgla~~  581 (752)
                                    ..+.++|+|++|.|||++.   ++.+ .|+||+.+..
T Consensus       174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                          2235799999999999987   4554 8999998875


No 285
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=98.35  E-value=2.1e-06  Score=73.83  Aligned_cols=55  Identities=27%  Similarity=0.373  Sum_probs=42.9

Q ss_pred             ceEEEecCCCcEEEEcCCCCcEEEeeccCC-ccccceeEecCCCeEEEEecCCCccceeEeee
Q 043278           69 GVLTIDSIDGNLKILHNGGNPIAVSSVEGA-SNNTSATLLQSGNLVLREMDTDGTIKRVLWQS  130 (752)
Q Consensus        69 ~~l~~~~~~g~L~l~~~~g~~~~~~~~~~~-~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQS  130 (752)
                      -+|.+-. ||||||.+. +.++|.+++... .....++|.++|||||.+.+     ++++|.|
T Consensus        21 y~l~~q~-DgNLvly~~-~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~~-----~~~vWss   76 (105)
T 4h3o_A           21 YHFIMQD-DCNLVLYDH-STSTWASNTEIGGKSGCSAVLQSDGNFVVYDSS-----GRSLWAS   76 (105)
T ss_dssp             EEEEECT-TSCEEEEET-TEEEEECCCCCTTCCSCEEEECTTSCEEEECTT-----CCEEEEC
T ss_pred             EEEEECC-CCeEEEEEC-CEEEEEecCCCCCCccEEEEEeCCccEEEECCC-----cEEEEEe
Confidence            4688877 999999974 578898887433 23457899999999999765     5689986


No 286
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1
Probab=98.31  E-value=1.1e-06  Score=87.95  Aligned_cols=93  Identities=17%  Similarity=0.344  Sum_probs=64.4

Q ss_pred             CCCCCCCCCceEEEecCCCcEEEEcCCCCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEeeeccCCCcccC
Q 043278           60 RNTPILDQSGVLTIDSIDGNLKILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLWQSFDYPTDTLL  139 (752)
Q Consensus        60 r~~Pv~~~~~~l~~~~~~g~L~l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lWQSFd~PTDTlL  139 (752)
                      .++|.++. -+|.+.. +|+|+|.+.+ .++|.+++........++|.++||||+++.+     +..+||||.+      
T Consensus       144 ~~d~s~G~-~~l~l~~-dG~LvL~~~~-~~~W~s~~~~~~~~~~~~L~~~Gnl~ly~~~-----~~~vw~s~~~------  209 (236)
T 1dlp_A          144 TQSLQLSP-YRLSMET-DCNLVLFDRD-DRVWSTNTAGKGTGCRAVLQPNGRMDVLTNQ-----NIAVWTSGNS------  209 (236)
T ss_dssp             SCCCBCSS-CEEEEET-TTEEEEEBTT-BCCSCCCCCSSCSSCEEEEETTTEEEEEETT-----TEEEEECCCC------
T ss_pred             CcEeecCc-EEEEECC-CCcEEEEcCC-EeEEeCCCcCCCCceEEEECCCCcEEEEeCC-----CcEEEEeCCC------
Confidence            34454333 5799987 8999998754 5777665532222356899999999999743     4689999943      


Q ss_pred             CCCeeccccccCceeEEEEecCCCCCCCCCcEEeeecCCCceeEEEecCceEEEecc
Q 043278          140 PGMKLGINLQTGHQWFLQSWLDYSSPAQGSFTLGIEPNATNQLIIRWRRETIYWTSG  196 (752)
Q Consensus       140 pg~kl~~~~~tg~~~~L~Sw~s~~dps~G~f~l~~~~~g~~~~~~~~~~~~~yw~~g  196 (752)
                                         |      ++|.|++.+|++|..+++  .   ..||.+|
T Consensus       210 -------------------~------~~~~~rl~Ld~dG~l~ly--~---~~~W~sg  236 (236)
T 1dlp_A          210 -------------------R------SAGRYVFVLQPDRNLAIY--G---GALWTTG  236 (236)
T ss_dssp             -------------------C------SSSCCEEEECSSSCEEEE--C---CCCCBC-
T ss_pred             -------------------C------CCCCEEEEEcCCCcEEEe--C---CCCccCC
Confidence                               1      236789999999965544  2   2688765


No 287
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.29  E-value=3.5e-06  Score=86.18  Aligned_cols=136  Identities=18%  Similarity=0.152  Sum_probs=99.5

Q ss_pred             CeeecCCcc-cEEEEEec-CCceeEEEEcccCCcccHHHHHHHHHHHHhcC-CCCcceeeeeeeeCCeeEEEEeeCCCCC
Q 043278          436 NKLGEGGFG-PVYKGKLA-DEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQ-HTNLVRLLGCSLHGEERLLVYEFMPNKS  512 (752)
Q Consensus       436 ~~LG~G~fg-~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~~gs  512 (752)
                      +.+..|..+ .||+.... ++..++||+-...   ...++.+|...|..+. +--+.++++++.+++..++|||++++.+
T Consensus        30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~  106 (272)
T 4gkh_A           30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT  106 (272)
T ss_dssp             EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred             EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence            456666665 58987764 4567899986533   3456788999998884 3346778899998899999999999988


Q ss_pred             HhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------------
Q 043278          513 LDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKY--------------------------------------------  548 (752)
Q Consensus       513 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------------------------------------------  548 (752)
                      +.......       ......++.+++..|..||..                                            
T Consensus       107 ~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (272)
T 4gkh_A          107 AFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV  179 (272)
T ss_dssp             HHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred             ccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence            87654321       123345667777777777742                                            


Q ss_pred             -----------CCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          549 -----------SRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       549 -----------~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                                 ..+.++|+|+++.|||+++++.+-|+||+.+..
T Consensus       180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                       112389999999999999887778999998864


No 288
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.18  E-value=2.5e-06  Score=91.08  Aligned_cols=79  Identities=6%  Similarity=0.040  Sum_probs=54.9

Q ss_pred             Cee-ecCCcccEEEEEec-------CCceeEEEEcccCC---cccHHHHHHHHHHHHhcCC---CCcceeeeeeeeC---
Q 043278          436 NKL-GEGGFGPVYKGKLA-------DEQEVAIKRLSRSS---GQGIVEFKNEVRLIAKLQH---TNLVRLLGCSLHG---  498 (752)
Q Consensus       436 ~~L-G~G~fg~Vy~~~~~-------~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~---  498 (752)
                      +.| +.|....+|+....       +++.+++|+.....   ......+.+|+.++..+..   ..+.+++.++.++   
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            567 88889999998764       26678888765432   1012356788888888742   3567788877655   


Q ss_pred             CeeEEEEeeCCCCCHh
Q 043278          499 EERLLVYEFMPNKSLD  514 (752)
Q Consensus       499 ~~~~lv~E~~~~gsL~  514 (752)
                      ...++||||+++..+.
T Consensus       106 g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             SSCEEEEECCCCBCCC
T ss_pred             CCceEEEEecCCCChh
Confidence            3568999999987654


No 289
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.11  E-value=8.8e-06  Score=86.98  Aligned_cols=143  Identities=12%  Similarity=0.171  Sum_probs=90.4

Q ss_pred             CcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCC--cceeeeeeeeC-CeeEEEEeeCC
Q 043278          433 STTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTN--LVRLLGCSLHG-EERLLVYEFMP  509 (752)
Q Consensus       433 ~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~E~~~  509 (752)
                      ...+.|+.|....+|+... +++.+++|.....     ..+..|..++..+....  +.++++++... ...++||||++
T Consensus        44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~  117 (362)
T 3ovc_A           44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ  117 (362)
T ss_dssp             EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred             ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence            3456789999999999886 5778999987432     25788999999886533  55677776654 56899999999


Q ss_pred             CCCHhHH------------------HhhcCCCC--------------CCCHHHH---------------------HHHHH
Q 043278          510 NKSLDFF------------------LFNSGRKN--------------VLNWEKR---------------------FIIIE  536 (752)
Q Consensus       510 ~gsL~~~------------------l~~~~~~~--------------~l~~~~~---------------------~~i~~  536 (752)
                      +..+...                  |+......              .-.|...                     .....
T Consensus       118 G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  197 (362)
T 3ovc_A          118 GVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQ  197 (362)
T ss_dssp             SEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchH
Confidence            8665321                  11110000              0011111                     01111


Q ss_pred             HHHHHHHHHHhcC-CCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          537 GISQGLLYLHKYS-RLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       537 ~i~~~l~~LH~~~-~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                      .+...+..+.... .+.++|+|+++.|||++++..+.|+||+.+..
T Consensus       198 ~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~  243 (362)
T 3ovc_A          198 ALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF  243 (362)
T ss_dssp             HHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence            1222222332211 24689999999999998877788999999875


No 290
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.91  E-value=5.9e-05  Score=79.67  Aligned_cols=141  Identities=17%  Similarity=0.203  Sum_probs=81.1

Q ss_pred             CeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcC--CCCcceeee------eeeeCCeeEEEEee
Q 043278          436 NKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQ--HTNLVRLLG------CSLHGEERLLVYEF  507 (752)
Q Consensus       436 ~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~------~~~~~~~~~lv~E~  507 (752)
                      +.|+.|..+.||+....+| .+++|+....    ..++..|..++..+.  .-.+.+++.      +...++..+++|||
T Consensus        38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~  112 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW  112 (346)
T ss_dssp             EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred             eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence            3466677899999987655 4889988652    233444555555542  112333443      12345678999999


Q ss_pred             CCCCCHh--------------HHHhhc-C-C--C-------CCCCHHHHH------------------------------
Q 043278          508 MPNKSLD--------------FFLFNS-G-R--K-------NVLNWEKRF------------------------------  532 (752)
Q Consensus       508 ~~~gsL~--------------~~l~~~-~-~--~-------~~l~~~~~~------------------------------  532 (752)
                      +++..+.              ..++.. . .  .       ..-.|...+                              
T Consensus       113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  192 (346)
T 2q83_A          113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI  192 (346)
T ss_dssp             CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred             ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence            9986542              011111 0 0  0       011232210                              


Q ss_pred             -HHHHHHHHHHHHHHh----------cCCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          533 -IIIEGISQGLLYLHK----------YSRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       533 -~i~~~i~~~l~~LH~----------~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                       .+...+.+++.+|+.          ..+..++|+|+++.|||++.++.+.|+||+.+..
T Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence             111224446667763          1235699999999999998888999999998763


No 291
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.89  E-value=5e-05  Score=78.32  Aligned_cols=80  Identities=18%  Similarity=0.218  Sum_probs=59.5

Q ss_pred             cCCCcCCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCC---CcceeeeeeeeCCeeEEEEe
Q 043278          430 NNFSTTNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHT---NLVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       430 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~E  506 (752)
                      ......+.+|.|..+.||+.++.+|+.++||+...........|..|...|+.+...   -+.++++..    ..++|||
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e   90 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME   90 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred             CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEE
Confidence            345556789999999999999999999999987665544455688999999888432   244455432    3478999


Q ss_pred             eCCCCCH
Q 043278          507 FMPNKSL  513 (752)
Q Consensus       507 ~~~~gsL  513 (752)
                      |++.+..
T Consensus        91 ~l~~~~~   97 (288)
T 3f7w_A           91 WVDERPP   97 (288)
T ss_dssp             CCCCCCC
T ss_pred             eecccCC
Confidence            9987654


No 292
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.88  E-value=5.4e-05  Score=82.02  Aligned_cols=75  Identities=15%  Similarity=0.174  Sum_probs=49.5

Q ss_pred             CCeeecCCcccEEEEEec-CCceeEEEEcccCCc-------ccHHHHHHHHHHHHhcCC--CC-cceeeeeeeeCCeeEE
Q 043278          435 TNKLGEGGFGPVYKGKLA-DEQEVAIKRLSRSSG-------QGIVEFKNEVRLIAKLQH--TN-LVRLLGCSLHGEERLL  503 (752)
Q Consensus       435 ~~~LG~G~fg~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~~E~~~l~~l~h--~n-iv~l~~~~~~~~~~~l  503 (752)
                      .+.||.|..+.||++... +++.++||.......       ....++..|.+++..+..  +. +.+++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            368999999999999764 467899997643211       123456788888887742  33 3345543  3455789


Q ss_pred             EEeeCCCC
Q 043278          504 VYEFMPNK  511 (752)
Q Consensus       504 v~E~~~~g  511 (752)
                      |||++++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999763


No 293
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.70  E-value=0.00026  Score=73.65  Aligned_cols=138  Identities=21%  Similarity=0.172  Sum_probs=92.6

Q ss_pred             CCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcC---CCCcceeeeeeeeCCeeEEEEeeCCCC
Q 043278          435 TNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQ---HTNLVRLLGCSLHGEERLLVYEFMPNK  511 (752)
Q Consensus       435 ~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~E~~~~g  511 (752)
                      .+.|+.|....+|+... ++..++||+....   ....+..|...|+.+.   ...+.++++++...+..++||||+++.
T Consensus        41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~  116 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS  116 (312)
T ss_dssp             EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred             eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence            46789999999999886 4677889987543   3567889999888884   356888888888778899999999987


Q ss_pred             CHhH-----------HHhhcCCCC-------------------CCCHHHHHH---HH----------------HHHHHH-
Q 043278          512 SLDF-----------FLFNSGRKN-------------------VLNWEKRFI---II----------------EGISQG-  541 (752)
Q Consensus       512 sL~~-----------~l~~~~~~~-------------------~l~~~~~~~---i~----------------~~i~~~-  541 (752)
                      .+..           .++......                   .-+|.....   +.                ..++.. 
T Consensus       117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l  196 (312)
T 3jr1_A          117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV  196 (312)
T ss_dssp             CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence            6521           122221100                   124543321   11                111111 


Q ss_pred             HHHHHh-cCCCcEeecCCCCCcEEecCCCCceecccc
Q 043278          542 LLYLHK-YSRLRVIHRDLKASNILLDDKMNPKISDFG  577 (752)
Q Consensus       542 l~~LH~-~~~~~iiH~Dikp~NIll~~~~~~kl~DFg  577 (752)
                      ...|.. ...+.++|+|+.+.|++++.++ +.|+|+.
T Consensus       197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            223322 2346799999999999999887 8899984


No 294
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.57  E-value=0.00044  Score=75.41  Aligned_cols=77  Identities=9%  Similarity=0.100  Sum_probs=46.9

Q ss_pred             CCcEeecCCCCCcEEecCCCCceecccccceeecccccccccccccc--cCCccChhhhccC---CCCccchhHHHHHHH
Q 043278          550 RLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESEANTKRIVG--TYGYMSPEYAMSG---IVSIKTDVFSFGVLV  624 (752)
Q Consensus       550 ~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~t~k~DV~S~G~vl  624 (752)
                      ...++|+|++|.|||++.++ ++|+||+.+..-.......   ....  ...|.+|+.....   .-....++......+
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIG---AYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQT  306 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHH---HHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHH---HHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence            45699999999999998876 9999999987532111100   0010  1345566544311   111234556777777


Q ss_pred             HHHHhC
Q 043278          625 LEIVSG  630 (752)
Q Consensus       625 ~elltG  630 (752)
                      |+.+.+
T Consensus       307 ~~~y~~  312 (420)
T 2pyw_A          307 WNLFNK  312 (420)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            777665


No 295
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.24  E-value=0.00071  Score=70.70  Aligned_cols=158  Identities=15%  Similarity=0.116  Sum_probs=87.6

Q ss_pred             cHHHHHHHhcCCCc-----CCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCC--cceeee
Q 043278          421 DFQTIAAAANNFST-----TNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTN--LVRLLG  493 (752)
Q Consensus       421 ~~~~i~~~~~~~~~-----~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~  493 (752)
                      +.+++...-.+|..     .+.|+.|....+|+....+| .+++|......  ...++..|+.++..+...+  +.+++.
T Consensus         8 ~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~   84 (322)
T 2ppq_A            8 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLP   84 (322)
T ss_dssp             CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred             CHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence            44555555555654     24566788889999987665 68889886521  1124556777777663212  233332


Q ss_pred             e------eeeCCeeEEEEeeCCCCCHhH--------------HHhhcCC----C--CC---CCHHHHHH-----------
Q 043278          494 C------SLHGEERLLVYEFMPNKSLDF--------------FLFNSGR----K--NV---LNWEKRFI-----------  533 (752)
Q Consensus       494 ~------~~~~~~~~lv~E~~~~gsL~~--------------~l~~~~~----~--~~---l~~~~~~~-----------  533 (752)
                      .      ....+..+++++|+++..+..              .++....    .  ..   ..|...+.           
T Consensus        85 ~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~  164 (322)
T 2ppq_A           85 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK  164 (322)
T ss_dssp             BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred             CCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence            1      122356789999999865421              0111100    0  00   11322111           


Q ss_pred             -HHHHHHHHHHHHHhc----CCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          534 -IIEGISQGLLYLHKY----SRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       534 -i~~~i~~~l~~LH~~----~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                       +...+...++.|+..    .+..++|+|+++.|||++++..+.|+||+.+..
T Consensus       165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence             011244455566532    234699999999999999876668999998764


No 296
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.18  E-value=0.0015  Score=67.60  Aligned_cols=128  Identities=14%  Similarity=0.135  Sum_probs=75.8

Q ss_pred             CCeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCc-ceeeeeeeeCCeeEEEEeeC-CCCC
Q 043278          435 TNKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNL-VRLLGCSLHGEERLLVYEFM-PNKS  512 (752)
Q Consensus       435 ~~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~E~~-~~gs  512 (752)
                      .+.|+.|....+|+.     +.+++|+........ ....+|+..+..+...++ .++++.+  .+.-++++||+ ++.+
T Consensus        23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~   94 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT   94 (301)
T ss_dssp             CEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred             eeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence            478999999999998     568888875432111 123567777777643333 3555543  33457899999 6655


Q ss_pred             HhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh---------------------------------------------
Q 043278          513 LDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHK---------------------------------------------  547 (752)
Q Consensus       513 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---------------------------------------------  547 (752)
                      +.......          +..++.++++.|+-||+                                             
T Consensus        95 l~~~~~~~----------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~  164 (301)
T 3dxq_A           95 MSPEKFKT----------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRS  164 (301)
T ss_dssp             CCHHHHHH----------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHH
T ss_pred             CCHhhHhh----------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHH
Confidence            43210000          00012222222222221                                             


Q ss_pred             -----cCCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          548 -----YSRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       548 -----~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                           .....++|+|+.+.||+ ..++.+.|+||..+..
T Consensus       165 ~l~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          165 ALAAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             HHHSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             HHHhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence                 12345899999999999 5667789999998875


No 297
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.18  E-value=0.0016  Score=69.49  Aligned_cols=141  Identities=19%  Similarity=0.219  Sum_probs=83.5

Q ss_pred             CeeecCCcccEEEEEecC--------CceeEEEEcccCCcccHHHHHHHHHHHHhcCCCC-cceeeeeeeeCCeeEEEEe
Q 043278          436 NKLGEGGFGPVYKGKLAD--------EQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTN-LVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       436 ~~LG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~E  506 (752)
                      +.|..|-...+|+....+        ++.+++|+... .......+.+|.++++.+...+ ..++++++.++    +|||
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g----~v~e  130 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPEG----RLEQ  130 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTE----EEEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCCc----cEEE
Confidence            577788889999988742        46788888633 2234566678999998884322 35666665432    9999


Q ss_pred             eCCCCCHhHH-----------------HhhcCC--CCCC--CHHHHHHHHHHHHH-------------------HHHHHH
Q 043278          507 FMPNKSLDFF-----------------LFNSGR--KNVL--NWEKRFIIIEGISQ-------------------GLLYLH  546 (752)
Q Consensus       507 ~~~~gsL~~~-----------------l~~~~~--~~~l--~~~~~~~i~~~i~~-------------------~l~~LH  546 (752)
                      |+++..|..-                 ++....  .+..  -|.+..++..++..                   .+..|.
T Consensus       131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~  210 (379)
T 3feg_A          131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR  210 (379)
T ss_dssp             CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred             EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence            9998665311                 111110  1111  23444444443321                   233332


Q ss_pred             h----c-CCCcEeecCCCCCcEEecCC----CCceeccccccee
Q 043278          547 K----Y-SRLRVIHRDLKASNILLDDK----MNPKISDFGMARI  581 (752)
Q Consensus       547 ~----~-~~~~iiH~Dikp~NIll~~~----~~~kl~DFgla~~  581 (752)
                      +    . ....++|+|+.+.|||++.+    +.+.|+||..+..
T Consensus       211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            2    1 23468999999999999876    7899999998875


No 298
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.17  E-value=0.0073  Score=63.02  Aligned_cols=142  Identities=13%  Similarity=0.144  Sum_probs=82.9

Q ss_pred             CeeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCC--Ccceeeee-----eeeCCeeEEEEeeC
Q 043278          436 NKLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHT--NLVRLLGC-----SLHGEERLLVYEFM  508 (752)
Q Consensus       436 ~~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~-----~~~~~~~~lv~E~~  508 (752)
                      ..|+ |....||+....+|+.+++|...... .....+..|..++..+...  .+.+++..     ...++..+++||++
T Consensus        32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i  109 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  109 (328)
T ss_dssp             EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence            3566 88889999887778789999986331 2345667788888777422  23444443     12244567899999


Q ss_pred             CCCCHh-----HH---------Hhhc--C----CCCCCCHHHH----HHH---------------HHHHHHHHHHHHhc-
Q 043278          509 PNKSLD-----FF---------LFNS--G----RKNVLNWEKR----FII---------------IEGISQGLLYLHKY-  548 (752)
Q Consensus       509 ~~gsL~-----~~---------l~~~--~----~~~~l~~~~~----~~i---------------~~~i~~~l~~LH~~-  548 (752)
                      ++..+.     ..         ++..  .    ....+++...    ..+               ...+.+.++.+... 
T Consensus       110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (328)
T 1zyl_A          110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW  189 (328)
T ss_dssp             CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            875532     10         1110  0    1112232211    001               11111223333221 


Q ss_pred             ---CCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          549 ---SRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       549 ---~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                         .+..++|+|+++.|||++ + .+.|+||+.+..
T Consensus       190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence               234589999999999999 4 899999988764


No 299
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.17  E-value=0.00075  Score=73.63  Aligned_cols=72  Identities=15%  Similarity=0.253  Sum_probs=49.4

Q ss_pred             CeeecCCcccEEEEEecC--------CceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCc-ceeeeeeeeCCeeEEEEe
Q 043278          436 NKLGEGGFGPVYKGKLAD--------EQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNL-VRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       436 ~~LG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~E  506 (752)
                      +.|+.|....||+....+        ++.+++|+....  .....+..|..++..+...++ .++++.+.+    .+|+|
T Consensus        79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e  152 (429)
T 1nw1_A           79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  152 (429)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence            578888889999998753        467888887432  122455679888888853333 566666543    28999


Q ss_pred             eCCCCCH
Q 043278          507 FMPNKSL  513 (752)
Q Consensus       507 ~~~~gsL  513 (752)
                      |+++..|
T Consensus       153 ~l~G~~l  159 (429)
T 1nw1_A          153 YIPSRPL  159 (429)
T ss_dssp             CCCEEEC
T ss_pred             EeCCccc
Confidence            9986444


No 300
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.15  E-value=0.0029  Score=66.41  Aligned_cols=142  Identities=15%  Similarity=0.095  Sum_probs=72.7

Q ss_pred             CeeecCCccc-EEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCC--CCcceeeeeeeeCCeeEEEEeeCCCCC
Q 043278          436 NKLGEGGFGP-VYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQH--TNLVRLLGCSLHGEERLLVYEFMPNKS  512 (752)
Q Consensus       436 ~~LG~G~fg~-Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~E~~~~gs  512 (752)
                      +.|+.|.... +|+....+++.+++|.......   .++..|+.++..+..  -.+.+++.+..+.  -+++||++++..
T Consensus        24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~   98 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDAL   98 (333)
T ss_dssp             CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCB
T ss_pred             eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcc
Confidence            4565554444 6677654467777876544321   223456666666532  2355666654333  278999998766


Q ss_pred             HhHHHhhc---------------------CC--CCCCCHHHHH-------H-------------HHHHHHHHHHHHH---
Q 043278          513 LDFFLFNS---------------------GR--KNVLNWEKRF-------I-------------IIEGISQGLLYLH---  546 (752)
Q Consensus       513 L~~~l~~~---------------------~~--~~~l~~~~~~-------~-------------i~~~i~~~l~~LH---  546 (752)
                      +...+...                     ..  ...++.....       .             ....+...++.|.   
T Consensus        99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~  178 (333)
T 3csv_A           99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ  178 (333)
T ss_dssp             HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence            64333210                     00  0111111100       0             0011112222221   


Q ss_pred             hcCCCcEeecCCCCCcEEecCC----CCceecccccceee
Q 043278          547 KYSRLRVIHRDLKASNILLDDK----MNPKISDFGMARIF  582 (752)
Q Consensus       547 ~~~~~~iiH~Dikp~NIll~~~----~~~kl~DFgla~~~  582 (752)
                      ......++|+|+++.|||++.+    ..+.|+||+.+..-
T Consensus       179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            1223569999999999999874    67899999988753


No 301
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.01  E-value=0.0028  Score=69.50  Aligned_cols=73  Identities=16%  Similarity=0.161  Sum_probs=47.6

Q ss_pred             CeeecCCcccEEEEEecC-CceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCc-ceeeeeeeeCCeeEEEEeeCCCCCH
Q 043278          436 NKLGEGGFGPVYKGKLAD-EQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNL-VRLLGCSLHGEERLLVYEFMPNKSL  513 (752)
Q Consensus       436 ~~LG~G~fg~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~E~~~~gsL  513 (752)
                      +.|+.|-...+|+....+ +..+++|+....... ......|..++..+...++ .++++.+.  +  .+||||+++..|
T Consensus       114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l  188 (458)
T 2qg7_A          114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL  188 (458)
T ss_dssp             EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred             EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence            578888889999998765 467888876433211 1122578888888865554 46676663  2  259999987554


No 302
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.62  E-value=0.0038  Score=66.59  Aligned_cols=73  Identities=11%  Similarity=0.160  Sum_probs=43.7

Q ss_pred             CeeecCCcccEEEEEecC---------CceeEEEEcccCCcccHHHHHHHHHHHHhcCCCC-cceeeeeeeeCCeeEEEE
Q 043278          436 NKLGEGGFGPVYKGKLAD---------EQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTN-LVRLLGCSLHGEERLLVY  505 (752)
Q Consensus       436 ~~LG~G~fg~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~  505 (752)
                      +.|+.|....+|+....+         ++.+++|+....... ......|..++..+...+ ..++++..  .  -.+||
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~  113 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE  113 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred             EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence            467888889999988754         267888876543221 112367888888774333 34566543  2  36899


Q ss_pred             eeCCCCCH
Q 043278          506 EFMPNKSL  513 (752)
Q Consensus       506 E~~~~gsL  513 (752)
                      ||+++..+
T Consensus       114 e~i~G~~l  121 (369)
T 3c5i_A          114 EWLYGDPL  121 (369)
T ss_dssp             ECCCSEEC
T ss_pred             EEecCCcC
Confidence            99987543


No 303
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.59  E-value=0.022  Score=59.87  Aligned_cols=32  Identities=22%  Similarity=0.402  Sum_probs=28.3

Q ss_pred             CCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          550 RLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       550 ~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                      ...++|+|+.+.||++++++.+.|+||+.+..
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            34699999999999999888899999988775


No 304
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.14  E-value=0.022  Score=54.78  Aligned_cols=102  Identities=13%  Similarity=0.058  Sum_probs=65.2

Q ss_pred             CCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCcEEecCCCCceecccccceeeccccccc
Q 043278          510 NKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASNILLDDKMNPKISDFGMARIFEVNESEA  589 (752)
Q Consensus       510 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~~~~~~~~~  589 (752)
                      .-+|.++|...  ..++++++++.++.|.+.+|.-+-.... + ..+=+-|..|+|..+|.+.+.+ ..+.         
T Consensus        32 ~vSL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~---------   97 (229)
T 2yle_A           32 ALSLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD---------   97 (229)
T ss_dssp             EEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred             cccHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc---------
Confidence            34688888653  4569999999999999999877622110 1 1233457899999999887753 1110         


Q ss_pred             ccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCC
Q 043278          590 NTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQ  631 (752)
Q Consensus       590 ~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~  631 (752)
                           .....+.|||... ...+.+.-|||+|+++|.-+--.
T Consensus        98 -----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDyg  133 (229)
T 2yle_A           98 -----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYG  133 (229)
T ss_dssp             --------------CCSS-SSSCHHHHHHHHHHHHHHHHTTT
T ss_pred             -----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcC
Confidence                 1122456887653 45578899999999999998643


No 305
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.09  E-value=0.013  Score=62.62  Aligned_cols=142  Identities=18%  Similarity=0.156  Sum_probs=81.4

Q ss_pred             CeeecCCcccEEEEEecC--------CceeEEEEcccCCcc-----------cH-------HHHHHHHHHHHhcCCC-Cc
Q 043278          436 NKLGEGGFGPVYKGKLAD--------EQEVAIKRLSRSSGQ-----------GI-------VEFKNEVRLIAKLQHT-NL  488 (752)
Q Consensus       436 ~~LG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~-----------~~-------~~~~~E~~~l~~l~h~-ni  488 (752)
                      +.|..|-...+|+...++        .+.+.+++.-.....           .+       +....|..+++.+... -.
T Consensus        58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~  137 (401)
T 3f2s_A           58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG  137 (401)
T ss_dssp             EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred             EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence            567778888899988754        256777775332111           00       1123488888877433 34


Q ss_pred             ceeeeeeeeCCeeEEEEeeCCCCCHhHHH-----------------hhcC--CCCCCC--HHHHHHHHHHHH--------
Q 043278          489 VRLLGCSLHGEERLLVYEFMPNKSLDFFL-----------------FNSG--RKNVLN--WEKRFIIIEGIS--------  539 (752)
Q Consensus       489 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l-----------------~~~~--~~~~l~--~~~~~~i~~~i~--------  539 (752)
                      .++++++..+    +|+||+++..|..--                 +...  -.....  +....++..++.        
T Consensus       138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~  213 (401)
T 3f2s_A          138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES  213 (401)
T ss_dssp             CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred             CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence            5677766432    899999876553211                 1110  011122  233333333221        


Q ss_pred             --------------HHHH----HHHhc-CCCcEeecCCCCCcEEecCC------CCceeccccccee
Q 043278          540 --------------QGLL----YLHKY-SRLRVIHRDLKASNILLDDK------MNPKISDFGMARI  581 (752)
Q Consensus       540 --------------~~l~----~LH~~-~~~~iiH~Dikp~NIll~~~------~~~kl~DFgla~~  581 (752)
                                    .-+.    +|... ....++|+|+.+.|||++++      +.+.|+||..+..
T Consensus       214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~  280 (401)
T 3f2s_A          214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred             hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence                          1122    23222 23468999999999999877      7899999998864


No 306
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.40  E-value=0.19  Score=54.13  Aligned_cols=140  Identities=16%  Similarity=0.240  Sum_probs=83.5

Q ss_pred             CeeecCCcccEEEEEecC--------CceeEEEEcccCCcccHHHHHHHHHHHHhcCCCC-cceeeeeeeeCCeeEEEEe
Q 043278          436 NKLGEGGFGPVYKGKLAD--------EQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTN-LVRLLGCSLHGEERLLVYE  506 (752)
Q Consensus       436 ~~LG~G~fg~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~E  506 (752)
                      +.|..|-...+|+....+        ++.+++++....... .....+|..+++.+...+ ..++++.+.    -++|||
T Consensus        76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e  150 (424)
T 3mes_A           76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE  150 (424)
T ss_dssp             EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred             EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence            577788889999998753        577888886543221 122367888888774323 344554332    378999


Q ss_pred             eCCCCCHhH-------H----------Hhh--c-----C---CCCCCCHHHHHHHHHHH-------------------HH
Q 043278          507 FMPNKSLDF-------F----------LFN--S-----G---RKNVLNWEKRFIIIEGI-------------------SQ  540 (752)
Q Consensus       507 ~~~~gsL~~-------~----------l~~--~-----~---~~~~l~~~~~~~i~~~i-------------------~~  540 (752)
                      |+++..|..       .          ++.  .     .   .+.+..|.+...+..++                   ..
T Consensus       151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~  230 (424)
T 3mes_A          151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE  230 (424)
T ss_dssp             CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred             EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence            999866421       0          010  0     0   11111243333333222                   22


Q ss_pred             HHHHHHh---------------------cCCCcEeecCCCCCcEEecCCCCceeccccccee
Q 043278          541 GLLYLHK---------------------YSRLRVIHRDLKASNILLDDKMNPKISDFGMARI  581 (752)
Q Consensus       541 ~l~~LH~---------------------~~~~~iiH~Dikp~NIll~~~~~~kl~DFgla~~  581 (752)
                      .+..|.+                     .....++|+|+.+.||+ +.++.+.|+||..+..
T Consensus       231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            2333321                     12345899999999999 8888999999999875


No 307
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.87  E-value=0.39  Score=51.40  Aligned_cols=30  Identities=30%  Similarity=0.430  Sum_probs=25.8

Q ss_pred             cEeecCCCCCcEEe------cCCCCceeccccccee
Q 043278          552 RVIHRDLKASNILL------DDKMNPKISDFGMARI  581 (752)
Q Consensus       552 ~iiH~Dikp~NIll------~~~~~~kl~DFgla~~  581 (752)
                      .++|+|+.+.|||+      +++..++++||.+|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            36799999999999      4567799999999875


No 308
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=82.04  E-value=2.9  Score=40.18  Aligned_cols=83  Identities=7%  Similarity=-0.000  Sum_probs=58.8

Q ss_pred             CCCCcceeeeeeeeCCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCcEeecCCCCCc
Q 043278          484 QHTNLVRLLGCSLHGEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLL-YLHKYSRLRVIHRDLKASN  562 (752)
Q Consensus       484 ~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~-~LH~~~~~~iiH~Dikp~N  562 (752)
                      .||++  -...-.+++...+.|+.-+++.=...+      ..++...+++++.+|+.... +++.     -+|--|+|+|
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~N  114 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPEN  114 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGG
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCce
Confidence            57777  334446667777777765333222223      23788899999998888766 5544     5788899999


Q ss_pred             EEecCCCCceecccccc
Q 043278          563 ILLDDKMNPKISDFGMA  579 (752)
Q Consensus       563 Ill~~~~~~kl~DFgla  579 (752)
                      |++|.++.++|.-.|+-
T Consensus       115 L~f~~~~~p~i~hRGi~  131 (219)
T 4ano_A          115 LMFNRALEPFFLHVGVK  131 (219)
T ss_dssp             EEECTTCCEEESCCEET
T ss_pred             EEEeCCCcEEEEEcCCc
Confidence            99999999999866653


No 309
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=79.94  E-value=2.4  Score=40.56  Aligned_cols=114  Identities=10%  Similarity=0.101  Sum_probs=76.9

Q ss_pred             CCCCcceeeeeeeeCCeeEEEEeeCC-CCCHhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCCCCc
Q 043278          484 QHTNLVRLLGCSLHGEERLLVYEFMP-NKSLDFFLFNSGRKNVLNWEKRFIIIEGISQGLLYLHKYSRLRVIHRDLKASN  562 (752)
Q Consensus       484 ~h~niv~l~~~~~~~~~~~lv~E~~~-~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~Dikp~N  562 (752)
                      .||+++.. .+-.+++...+.|+.-+ .-++.. +      ..++...+++++.+|+....+++.     =+|--|+|+|
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~N  109 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDE  109 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGG
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecce
Confidence            57888866 45566667777777654 222222 2      237889999999999988866654     4788899999


Q ss_pred             EEecCCCCceecccccceeecccccccccccccccCCccChhhhccCCCCccchhHHHHHHHHHHHhCCCCC
Q 043278          563 ILLDDKMNPKISDFGMARIFEVNESEANTKRIVGTYGYMSPEYAMSGIVSIKTDVFSFGVLVLEIVSGQKNH  634 (752)
Q Consensus       563 Ill~~~~~~kl~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~k~DV~S~G~vl~elltG~~p~  634 (752)
                      |+++.++.+++.--|+-..                   ++|.     .+++..=.-.+=+++..+++++..|
T Consensus       110 L~f~~~~~p~i~~RGik~~-------------------l~P~-----~~~ee~fL~qyKAliiall~~K~~F  157 (215)
T 4ann_A          110 LFFTRDGLPIAKTRGLQNV-------------------VDPL-----PVSEAEFLTRYKALVICAFNEKQSF  157 (215)
T ss_dssp             EEECTTSCEEESCCEETTT-------------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCH
T ss_pred             EEEcCCCCEEEEEccCccC-------------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCH
Confidence            9999999999986665321                   2221     1122222346778888899887655


No 310
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=77.55  E-value=38  Score=33.42  Aligned_cols=66  Identities=14%  Similarity=0.212  Sum_probs=43.1

Q ss_pred             CccEEeccCCCC--CC----CCCceEEEecCCCcEEEEcCCCCcEEEeeccCCccccceeEecCCCeEEEEec
Q 043278           52 DEPIWIANRNTP--IL----DQSGVLTIDSIDGNLKILHNGGNPIAVSSVEGASNNTSATLLQSGNLVLREMD  118 (752)
Q Consensus        52 ~t~vWvANr~~P--v~----~~~~~l~~~~~~g~L~l~~~~g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~  118 (752)
                      -+++|...+..+  +.    .+.|.+.++. ++.+...|++|+.+|............+..+.+||+++-+..
T Consensus        25 G~~~w~~~~~~~~~~~~~~~~pdG~ilvs~-~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~   96 (276)
T 3no2_A           25 KEIVWEYPLEKGWECNSVAATKAGEILFSY-SKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCG   96 (276)
T ss_dssp             TEEEEEEECCTTCCCCEEEECTTSCEEEEC-BSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEES
T ss_pred             CeEEEEeCCCccCCCcCeEECCCCCEEEeC-CCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEecC
Confidence            478899887652  21    1235666654 566777788899999877532223345778888998887643


No 311
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=77.04  E-value=0.47  Score=51.79  Aligned_cols=60  Identities=8%  Similarity=0.119  Sum_probs=17.7

Q ss_pred             cCCeeecCCcccEEEEEecC-CceeEE------EEcccC--CcccHHHHHHHHHHHHhcCCCCcceeeeeee
Q 043278          434 TTNKLGEGGFGPVYKGKLAD-EQEVAI------KRLSRS--SGQGIVEFKNEVRLIAKLQHTNLVRLLGCSL  496 (752)
Q Consensus       434 ~~~~LG~G~fg~Vy~~~~~~-~~~vav------K~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  496 (752)
                      +.++||   ||.||+|.+.. ..+||+      |..+..  ..+....|.+|..++..++|+|+++.+++..
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            346676   99999999864 367888      766543  2233456788999999999999999988754


No 312
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=76.66  E-value=1.2  Score=30.72  Aligned_cols=14  Identities=7%  Similarity=-0.083  Sum_probs=6.3

Q ss_pred             hhhhhhhhhhhccc
Q 043278          378 LCYLCYVTWRKLKA  391 (752)
Q Consensus       378 l~~~~~~~~rk~~~  391 (752)
                      +++++++++|+++.
T Consensus        27 i~~~~~~~~RRr~~   40 (44)
T 2ks1_B           27 VALGIGLFMRRRHI   40 (44)
T ss_dssp             HHHHHHHHHHTTTC
T ss_pred             HHHHHHHHhhhhHh
Confidence            33444444555443


No 313
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=74.19  E-value=17  Score=36.13  Aligned_cols=66  Identities=9%  Similarity=-0.017  Sum_probs=41.5

Q ss_pred             CccEEeccCCCCCC----CCCceEEEe-cCCCcEEEEcCC-CCcEEEeeccCCc-----cccceeEecCCCeEEEEe
Q 043278           52 DEPIWIANRNTPIL----DQSGVLTID-SIDGNLKILHNG-GNPIAVSSVEGAS-----NNTSATLLQSGNLVLREM  117 (752)
Q Consensus        52 ~t~vWvANr~~Pv~----~~~~~l~~~-~~~g~L~l~~~~-g~~~~~~~~~~~~-----~~~~a~lldsGNlVl~~~  117 (752)
                      -.++|...+..+..    ...+.+.+. ..++.++..|++ |+.+|........     -.+.+.++.+||+++.+.
T Consensus       155 G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~  231 (276)
T 3no2_A          155 GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW  231 (276)
T ss_dssp             SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred             CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence            47899888754322    122444443 323457778887 9999987643211     134678899999999874


No 314
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=73.22  E-value=1.4  Score=30.21  Aligned_cols=14  Identities=14%  Similarity=-0.021  Sum_probs=6.4

Q ss_pred             hhhhhhhhhhhccc
Q 043278          378 LCYLCYVTWRKLKA  391 (752)
Q Consensus       378 l~~~~~~~~rk~~~  391 (752)
                      +++..++++|+++.
T Consensus        26 i~~~~~~~~RRRr~   39 (44)
T 2l2t_A           26 VGLTFAVYVRRKSI   39 (44)
T ss_dssp             HHHHHHHHHHTTCS
T ss_pred             HHHHHHHHhhhhhh
Confidence            33444445555443


No 315
>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*
Probab=68.49  E-value=1.8  Score=34.40  Aligned_cols=36  Identities=22%  Similarity=0.380  Sum_probs=29.3

Q ss_pred             CCCCccchHHhhhhcCccccccccccccccccccccccccc
Q 043278          297 DNMSSTDCRANCFYNCSCIAFATGTSEYTDKQAYCEIWSEG  337 (752)
Q Consensus       297 ~~~sl~~C~~~Cl~nCsC~Aya~~~~~~~~~~~~C~~~~~~  337 (752)
                      ...++++|+..|+.+=.|.||.|.     .....|++..+.
T Consensus        28 ~~~sl~~Cq~aC~a~~~C~aFTyN-----~~s~~CflKs~~   63 (82)
T 2ll3_A           28 RASSLSECRARCQAEKECSHYTYN-----VKSGLCYPKRGK   63 (82)
T ss_dssp             ECSSHHHHHHHHHHCTTEEEEEEE-----TTTTEEEEEESS
T ss_pred             cCCCHHHHHHHhhccCCCCeEEec-----cCCCceEcccCC
Confidence            457889999999999999999984     345779877653


No 316
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=66.70  E-value=2.5  Score=28.14  Aligned_cols=23  Identities=26%  Similarity=0.449  Sum_probs=13.0

Q ss_pred             ehhhhHhHhhhhhhhhhhhhhhh
Q 043278          366 TIAIGVVLGIPLLCYLCYVTWRK  388 (752)
Q Consensus       366 ~i~~~~vl~i~ll~~~~~~~~rk  388 (752)
                      .|++|+++++.+++.+++++|||
T Consensus        15 GiVvG~v~gv~li~~l~~~~~rr   37 (38)
T 2k1k_A           15 AVIFGLLLGAALLLGILVFRSRR   37 (38)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             eeehHHHHHHHHHHHHHHHHeec
Confidence            34556655555555555555554


No 317
>1dmc_A CD6 metallothionein-1; NMR {Callinectes sapidus} SCOP: g.46.1.1 PDB: 1dmd_A 1j5l_A
Probab=52.51  E-value=3.9  Score=24.84  Aligned_cols=15  Identities=33%  Similarity=0.988  Sum_probs=13.3

Q ss_pred             ccchHHhhhhcCccc
Q 043278          301 STDCRANCFYNCSCI  315 (752)
Q Consensus       301 l~~C~~~Cl~nCsC~  315 (752)
                      -+||.+.|.+.|||-
T Consensus        15 keeC~ktC~KpCsCC   29 (31)
T 1dmc_A           15 KEECSKTCTKPCSCC   29 (31)
T ss_dssp             HHHHHHHCSSCCSSS
T ss_pred             HHHHHhhcCCccccC
Confidence            389999999999994


No 318
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=51.83  E-value=1.4  Score=48.43  Aligned_cols=31  Identities=13%  Similarity=-0.061  Sum_probs=25.2

Q ss_pred             ccHHHHHHHHHHHHhcCCCCcceeeeeeeeC
Q 043278          468 QGIVEFKNEVRLIAKLQHTNLVRLLGCSLHG  498 (752)
Q Consensus       468 ~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  498 (752)
                      .+..+|..|++.+.+++|+|+|+++|||...
T Consensus       321 ~g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~  351 (487)
T 3oja_A          321 QGSETERLECERENQARQREIDALKEQYRTV  351 (487)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             ccHHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence            4567899999999999999999999999754


No 319
>2li3_A Potassium channel toxin kappa-KTX3.1; alpha/alpha motif, alpha scorpion toxin, voltage gated potas channel alpha toxin; NMR {Tityus trivittatus} PDB: 2lka_A 2lo7_A
Probab=47.59  E-value=5.8  Score=23.75  Aligned_cols=11  Identities=45%  Similarity=1.265  Sum_probs=9.2

Q ss_pred             HHhhhhcCccc
Q 043278          305 RANCFYNCSCI  315 (752)
Q Consensus       305 ~~~Cl~nCsC~  315 (752)
                      ++-|++||.|.
T Consensus        19 q~yclknckc~   29 (30)
T 2li3_A           19 QDYCLKNCRCI   29 (30)
T ss_dssp             HHHHHHHSCCC
T ss_pred             hHHHHhcCcCC
Confidence            46799999996


No 320
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=40.60  E-value=1.7e+02  Score=29.79  Aligned_cols=135  Identities=15%  Similarity=0.159  Sum_probs=67.4

Q ss_pred             eeecCCcccEEEEEecCCceeEEEEcccCCcccHHHHHHHHHHHHhcCCCCcceeeee----------------------
Q 043278          437 KLGEGGFGPVYKGKLADEQEVAIKRLSRSSGQGIVEFKNEVRLIAKLQHTNLVRLLGC----------------------  494 (752)
Q Consensus       437 ~LG~G~fg~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~----------------------  494 (752)
                      ..-.| .+.||.+.. ++..++||-..   ....+-+..++...-.+..|+.--+.-.                      
T Consensus        76 ~s~~G-stgvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l~  150 (342)
T 1cja_A           76 RSEKG-TEGLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVIT  150 (342)
T ss_dssp             ECCST-TSCEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHHH
T ss_pred             eccCC-CCCeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHHH
Confidence            33445 456666655 57789999542   1122223344444444455542211110                      


Q ss_pred             eeeCCeeEEEEeeCCCCCHhHHHhhcCCCCCCCHHHHHHHHHHH--HHHHHHHHhcC-CCcEee-cCCCCCcEEecCCCC
Q 043278          495 SLHGEERLLVYEFMPNKSLDFFLFNSGRKNVLNWEKRFIIIEGI--SQGLLYLHKYS-RLRVIH-RDLKASNILLDDKMN  570 (752)
Q Consensus       495 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i--~~~l~~LH~~~-~~~iiH-~Dikp~NIll~~~~~  570 (752)
                      .......+++|||.++..|.+.-... ....+..+    .+.++  +-++..+..+. +.+.+. .--.+.|||++++..
T Consensus       151 ~l~~~~~~l~meyv~G~~L~e~~~~~-~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~  225 (342)
T 1cja_A          151 TLANQANILLMELVRGITLNKLTTTS-APEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA  225 (342)
T ss_dssp             HHTTCSEEEEEECCCEEESTTCCSSS-HHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT
T ss_pred             HhhcccceehhhhcCCCccccchhhh-hhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCC
Confidence            00122456999999876653321100 00112222    22332  23455555443 333332 236889999976554


Q ss_pred             -ceeccccccee
Q 043278          571 -PKISDFGMARI  581 (752)
Q Consensus       571 -~kl~DFgla~~  581 (752)
                       +.++|-+++..
T Consensus       226 ~~~~IDhn~af~  237 (342)
T 1cja_A          226 TVVPIDSKIIPL  237 (342)
T ss_dssp             CEEECSCCCCCC
T ss_pred             eEEEEcCCcccc
Confidence             88999988864


No 321
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=38.22  E-value=1e+02  Score=26.23  Aligned_cols=15  Identities=13%  Similarity=0.461  Sum_probs=11.1

Q ss_pred             CCCCCCcEEeeecCC
Q 043278          164 SPAQGSFTLGIEPNA  178 (752)
Q Consensus       164 dps~G~f~l~~~~~g  178 (752)
                      .+.||.|++...-.|
T Consensus        89 ~~~pG~Ytl~a~l~~  103 (120)
T 3isy_A           89 VPEPGTYEVKVTFKG  103 (120)
T ss_dssp             CCCSEEEEEEEEECC
T ss_pred             CCCCccEEEEEEEEe
Confidence            568899998876444


No 322
>3hms_A Hepatocyte growth factor; HGF/SF, hormone/growth factor, disulfide bond, glycoprotein, kringle, pyrrolidone carboxylic acid, serine protea homolog; 1.70A {Homo sapiens} SCOP: g.10.1.1 PDB: 3hmt_A 2hgf_A 3hmr_A
Probab=33.76  E-value=10  Score=31.37  Aligned_cols=31  Identities=23%  Similarity=0.487  Sum_probs=24.0

Q ss_pred             CCCccchHHhhhhc----Cccccccccccccccccccccc
Q 043278          298 NMSSTDCRANCFYN----CSCIAFATGTSEYTDKQAYCEI  333 (752)
Q Consensus       298 ~~sl~~C~~~Cl~n----CsC~Aya~~~~~~~~~~~~C~~  333 (752)
                      ..+.++|.++|.++    =-|-||.|.     .....|..
T Consensus        39 ~~s~eeCA~kC~~~~~~~F~CRAF~y~-----~k~q~C~l   73 (101)
T 3hms_A           39 VNTADQCANRCTRNKGLPFTCKAFVFD-----KARKQCLW   73 (101)
T ss_dssp             CSCHHHHHHHHHHCTTCSSCCCEEEEE-----TTTTEEEE
T ss_pred             cCCHHHHHHHHHhccCCCcceeeeEEe-----cCCCcEEE
Confidence            45779999999995    479999884     34568875


No 323
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=32.60  E-value=17  Score=26.95  Aligned_cols=12  Identities=42%  Similarity=0.708  Sum_probs=6.3

Q ss_pred             hhhhHhHhhhhh
Q 043278          367 IAIGVVLGIPLL  378 (752)
Q Consensus       367 i~~~~vl~i~ll  378 (752)
                      |++|.+++++++
T Consensus        12 ivlGg~~~lll~   23 (70)
T 2klu_A           12 IVLGGVAGLLLF   23 (70)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHhHHHHHHHH
Confidence            455555554443


No 324
>1zla_K Latent nuclear antigen; latency associated nuclear antigen (LANA), kaposi'S sarcoma herpes virus (KSHV), nucleosome core particle, chromatin; 2.90A {Xenopus laevis}
Probab=32.17  E-value=15  Score=20.83  Aligned_cols=15  Identities=40%  Similarity=0.592  Sum_probs=12.1

Q ss_pred             CCCCeeccccccCce
Q 043278          139 LPGMKLGINLQTGHQ  153 (752)
Q Consensus       139 Lpg~kl~~~~~tg~~  153 (752)
                      -|||+|..+..||..
T Consensus         3 ppgmrlrsgrstgap   17 (26)
T 1zla_K            3 PPGMRLRSGRSTGAP   17 (26)
T ss_pred             CCcceeecCcccCCc
Confidence            389999888888865


No 325
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=31.41  E-value=16  Score=28.67  Aligned_cols=22  Identities=18%  Similarity=0.457  Sum_probs=10.7

Q ss_pred             ehhhhHhHhhhhhhhhhhhhhh
Q 043278          366 TIAIGVVLGIPLLCYLCYVTWR  387 (752)
Q Consensus       366 ~i~~~~vl~i~ll~~~~~~~~r  387 (752)
                      .|++|++++++++.++++++||
T Consensus        12 ~Iv~gvi~gilliGllllliwk   33 (79)
T 2knc_B           12 VVLLSVMGAILLIGLAALLIWK   33 (79)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHH
Confidence            3445555555555444444443


No 326
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=28.75  E-value=24  Score=23.18  Aligned_cols=25  Identities=28%  Similarity=0.267  Sum_probs=12.7

Q ss_pred             ehhhhHhHhhhhhhhhhhhhhhhcc
Q 043278          366 TIAIGVVLGIPLLCYLCYVTWRKLK  390 (752)
Q Consensus       366 ~i~~~~vl~i~ll~~~~~~~~rk~~  390 (752)
                      .|+.++..+++...+++.+..|+.+
T Consensus        14 lII~~vmaGiIG~IllI~y~I~rl~   38 (40)
T 1afo_A           14 LIIFGVMAGVIGTILLISYGIRRLI   38 (40)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3445555555554455555555543


No 327
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=25.01  E-value=21  Score=23.06  Aligned_cols=6  Identities=0%  Similarity=0.080  Sum_probs=2.3

Q ss_pred             hhhhhh
Q 043278          383 YVTWRK  388 (752)
Q Consensus       383 ~~~~rk  388 (752)
                      .+++|+
T Consensus        28 ~~~iRR   33 (35)
T 1iij_A           28 GILIKR   33 (35)
T ss_dssp             THHHHH
T ss_pred             heEEee
Confidence            333443


No 328
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=21.61  E-value=25  Score=23.49  Aligned_cols=6  Identities=17%  Similarity=0.623  Sum_probs=2.4

Q ss_pred             hhhhhh
Q 043278          383 YVTWRK  388 (752)
Q Consensus       383 ~~~~rk  388 (752)
                      ++++||
T Consensus        34 ~~~~rR   39 (41)
T 2k9y_A           34 FFIHRR   39 (41)
T ss_dssp             HSSSSS
T ss_pred             eeEeee
Confidence            334443


No 329
>1c5e_A Head decoration protein; bacteriophage lambda, head protein D, protein crystal struct virus assembly, phage display, viral protein; 1.10A {Enterobacteria phage lambda} SCOP: b.85.2.1 PDB: 1tcz_A
Probab=20.43  E-value=65  Score=25.72  Aligned_cols=54  Identities=22%  Similarity=0.425  Sum_probs=33.4

Q ss_pred             eEEEecCCCcEEEEcCC--CCcEEEeeccCCccccceeEecCCCeEEEEecCCCccceeEe-eecc
Q 043278           70 VLTIDSIDGNLKILHNG--GNPIAVSSVEGASNNTSATLLQSGNLVLREMDTDGTIKRVLW-QSFD  132 (752)
Q Consensus        70 ~l~~~~~~g~L~l~~~~--g~~~~~~~~~~~~~~~~a~lldsGNlVl~~~~~~~~~~~~lW-QSFd  132 (752)
                      -|.+....|+||.-|+.  |+.|-+...........++..-+|-|-+         ..++| .|++
T Consensus        22 PLMLd~~sg~LV~WDG~~~g~AVgilA~~vd~~s~~~t~YKsG~F~~---------~al~WP~Sv~   78 (95)
T 1c5e_A           22 PLMLDTSSRKLVAWDGTTDGAAVGILAVAADQTSTTLTFYKSGTFRY---------EDVLWPEAAS   78 (95)
T ss_dssp             EEEECTTTCCEEECCSCSTTCEEEEECSCBCTTCSEEEEECEEEECT---------TTSCCCTTCC
T ss_pred             ceEEecCCCCEEeccCCCCccEEEEEEEEecCCccceEEEEeceeee---------eeccCccccc
Confidence            47776557899988774  6655554433332234566777777754         35778 6663


Done!